LOCUS       KCPA01000001             456 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 93tic ultra-conserved element locus
            uce-4516, sequence.
ACCESSION   KCPA01000001
VERSION     KCPA01000001.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 456)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 456)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="93tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>456
                     /note="ultra-conserved element locus uce-4516"
BASE COUNT          138 a           90 c           82 g          146 t
ORIGIN      
        1 atatgtgctt ggtgacatgg agctgattgc ccaaaggaat caggatacat atatttgtat
       61 tattgtacac gtgagtagct tgaatcatgt actgctcgct ctctttgttt ggattatgca
      121 gcttggctgg gcagccatcc aaaagattca cattaaattc tagctatatt cagcacaaaa
      181 gtcatctagc atcagaggat caaagttaca tcaaccaaca agcactaagg aattgataag
      241 ccactaaaat taggtcatct cctagcagct gcttttgatg gatgaagtag aatttagcct
      301 caggttttct atttaaagat ctgttacagc atcttctcct gcagctacaa tgagaacaca
      361 acaaagtata atgcttctga ttaaatgttt aatcattact ctttactctt ctgattgttt
      421 ctgccatggc acagatttac agcacatact atttgc
//
LOCUS       KCPA01000002             537 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 199tic ultra-conserved element locus
            uce-5301, sequence.
ACCESSION   KCPA01000002
VERSION     KCPA01000002.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 537)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 537)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="199tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>537
                     /note="ultra-conserved element locus uce-5301"
BASE COUNT          165 a          120 c          107 g          145 t
ORIGIN      
        1 caactgcact atctccaact ggccaacgtg gaggttggag accacacggg gatcaaagcg
       61 atatgaggac aacaggggtt tcattaaaat gttctcctca ctgcctgagg aaagagcagt
      121 gaggacagag tgagtggggg aggaagggaa atcatctggc ccaaacaagt ttaactaaaa
      181 aaaaaatcca agcaaaccac ctgtggtctc cttggaaact ggcttgcaac ccctccagcc
      241 accttttaat gaaaccccag agccccttta ttaatttatt aaagaatcta ttttctgaag
      301 attcataaac cgcgcataac tcatattcca acacatctct gctatgctaa tagcgcgtgc
      361 tgccatgaat aattaattct ttaattagta ataattagag gttgttgtat aggtcaaacc
      421 attgggctga cagcatgcta ctgtcaaaat gtcatttgaa ttaacaagac tgtggccctt
      481 tctacgcaga acaattcgtt gtttgggtcc cctcccctcc aaattttatt gttttaa
//
LOCUS       KCPA01000003             682 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 400tic ultra-conserved element locus
            uce-601, sequence.
ACCESSION   KCPA01000003
VERSION     KCPA01000003.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 682)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 682)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..682
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="400tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>682
                     /note="ultra-conserved element locus uce-601"
BASE COUNT          220 a          151 c          119 g          192 t
ORIGIN      
        1 aacgccagtt gtaatacaat ttattggatc ttctgaaatt tcagatcact gcatcctata
       61 atcaatacct tgcattcttc agcgacacag agcacaacca gtaaaaacaa gagtctcaag
      121 tgcacctata tttagcataa aagcacttat atacaaagaa caagacacaa ccactattta
      181 ttgttttagc tttaagtctc gtatgcctct agaggacaag acggcatgct ggccctttaa
      241 aactgaaatg cttgtttcct ttctgtaaga aaagtaaatc atgctatagt gagtggagct
      301 ttgaaaaagc atccatccat taaagttcat ggatcctcgt ttccagattg tccctcccct
      361 ggctgtgtct caagttacag ccttgtacaa tccaagtcta aataatattc actatgataa
      421 atgacaccat aactccgata tccacaatca atctttgctt taaagataca tccatcttca
      481 ataatgttga tggggattct gtaaaatggg aaacgtgact gttttcccga cctcctaaca
      541 gtgggggaag gaagctctga gtgatggctg tcagcccaca tctggctgca aaaataaatt
      601 agccttatgt agacaaatga aaggaccagc cctgactaga aaacagccac tcctgagcaa
      661 tggctaattt ataggactcc tt
//
LOCUS       KCPA01000004             711 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 510tic ultra-conserved element locus
            uce-85, sequence.
ACCESSION   KCPA01000004
VERSION     KCPA01000004.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 711)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 711)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..711
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="510tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>711
                     /note="ultra-conserved element locus uce-85"
BASE COUNT          203 a          166 c          131 g          211 t
ORIGIN      
        1 ctttggctgt aagaatattt tgctctggaa tgtgggttat tatgattcag cataaaaggc
       61 agctgcaagc tgttcaactg tctttcattg gaagaaatga tcatccagcc ttctaaatta
      121 cacaccttct ttctaacttt gccacgattc atttctgctt tctctttcag tctttgttga
      181 aaaaaaaaat ttaatgatac tattctcatt atacagctat cagttacata aaatatcttt
      241 gtttagaggc ctaataaaat tggtcatata aagaggaaat gagattttga atgtaaaacg
      301 aagctgacag tgctcttcta ttactatggt cttattagga aaaattctct gacatctgtt
      361 tatcccctgc agccaacctt gtattcagaa cacagtaatt gattcacagc atccactggg
      421 gatctaactg gctcactttt ccacaccgca ctacacaggt atctctgcag ctaattctga
      481 atgtacatct acatcgttat ctcctggtga actgtgaccc gaaacacttt ggaggcccag
      541 atgaaagtgc ttcctcaccc ctccagtgct gagggtgcag gcgtttctgc agcgcggcaa
      601 ttcacccagg acacccaatc acaaccagcc cctttgaagc cccgctcagc tgggagacca
      661 tgaatgattc atggcttctc tacacacact aaagggggaa gagcaaagct a
//
LOCUS       KCPA01000005             577 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 620tic ultra-conserved element locus
            uce-7852, sequence.
ACCESSION   KCPA01000005
VERSION     KCPA01000005.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 577)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 577)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="620tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>577
                     /note="ultra-conserved element locus uce-7852"
BASE COUNT          189 a          109 c           94 g          185 t
ORIGIN      
        1 ataatcattt gaatgaaata tttgctactt taagatcttt ttccttcttc tttcagatga
       61 tcctcttgtt ttgcatgtga aaaaaatcgt ctgagattta cagccctccc aaatggagat
      121 aaagccttgg caatgagttg gaaacctgtt gtaatctgtg atccaggaaa caaagagcct
      181 cattaatgca gagactttgg tgagcctttg atgttagcta gcatagcatt cactctcagt
      241 tccatttgca tttaaacatt cataaaaaca tcatctctgc ttcctttgcc ttaagcaatt
      301 taggagtaaa gtatagcttc tatttaaaga aacccactgt ggtgaggctt agaatacaaa
      361 tatcacataa tcttcaagca gagcaaatat tttatcctac atttctggtg ggcacgttta
      421 ataatattat atgtaagacc caaaataaaa catccatctt attttcatta accttacacc
      481 acatattcga gtcaaaagag aaaacgggcc ctgttatata ctacatacca atttgtggaa
      541 ggaagggaat ccacaggatt ttgcattatt gacaaga
//
LOCUS       KCPA01000006             713 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 732tic ultra-conserved element locus
            uce-7885, sequence.
ACCESSION   KCPA01000006
VERSION     KCPA01000006.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 713)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 713)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..713
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="732tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>713
                     /note="ultra-conserved element locus uce-7885"
BASE COUNT          194 a          159 c          174 g          186 t
ORIGIN      
        1 aaaatgacat cagaccatgt aaccaaggac taaaaacaag taatgaaatt ttaacttcag
       61 agacaattca gtactttctt gaaacattca gaaggtccca acaacatccc caaataaatg
      121 aataaagaca gaaagcaggc cactggaaaa gaggaaggta ataagaggca atattttgga
      181 ctaaccctat tagaatcttc cgtacagtct tctcgtgatg agccaacaga ccttgtgagt
      241 gacttatgct gcacctgtgg agataacagt tgcaggctgt ttgctctggc tgccatccct
      301 tgccctacgc ttaagccacc ctctgagccc tttgacctca ctctgtcccg gctcacatac
      361 atagagtgtc tatgagggcg ctgctgtgaa gaaaaaggac tggtataacc tagaccatag
      421 gaaaaagatt catgtggagc agatagagag tgggaatggc ttccatccat ttgatctggc
      481 agttttaact cctccattgt tttggagtgt cttgttggtg gtcttcgggt gtccagggta
      541 ccctcgctgc ggttattcct cgcggatgga ctgagcatag ttctgttatc actgtgccgg
      601 ggagcacttg gactggtagg agagttcaag tccatacagc tggatggaaa atacctactg
      661 gcgtttggtt ctgcagcttg ggccctggcc tcagaaaggt tgcccacgga ttt
//
LOCUS       KCPA01000007             503 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 840tic ultra-conserved element locus
            uce-5110, sequence.
ACCESSION   KCPA01000007
VERSION     KCPA01000007.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 503)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 503)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="840tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>503
                     /note="ultra-conserved element locus uce-5110"
BASE COUNT          138 a          111 c           93 g          161 t
ORIGIN      
        1 tttttgagac gtgcagatga gttcacaagt ttcccattga ccgttcattt gtattcccct
       61 gaatgcagtt tatattcttc agaatactag acaaagcacc atcacaaaat tttgctgaac
      121 taacaaatgc agtcattttg aagtttttac tgcttaaaag cacagaaaat gcagggcttt
      181 aacttctgtt gctttaactc gcaggctggt cttcctccct aacccctttg ttaacaagtg
      241 gtggtcctgt ccccctgggt ggcaggccca cccttcttca ccaagctgct gcccagggaa
      301 atgtcacttt attatcaatg ctgcttaatg aagaaggact ggacattaat tactcttgtg
      361 aagatggcta ttctgccttg tattctgctg ctacgaatgg acacacaggt aaatgacact
      421 aagatctcgt atggcatcca tgtagactat ttttaatatt cagttaggtc aaatgcattc
      481 ttcttaaaaa tgtgaaatta cca
//
LOCUS       KCPA01000008             603 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 952tic ultra-conserved element locus
            uce-5144, sequence.
ACCESSION   KCPA01000008
VERSION     KCPA01000008.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 603)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 603)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="952tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>603
                     /note="ultra-conserved element locus uce-5144"
BASE COUNT          146 a          142 c          124 g          191 t
ORIGIN      
        1 tgcagcagtg ccccttgcag tgcctactaa gagtttaata aagatctact gcctgagtta
       61 cctttggctt ttataaacca aaaaatgcaa acagcttgta agcagcattc attaccttgc
      121 acgccttcag ctgcttattg gatacacatc cccctccctc cagcatctct ctcttttttt
      181 aatatgtttt tttttaattt gttttgatga atgagtgaca accctgacac ccgattcgct
      241 gagattaata gaaacgacac aatatttacg tcgcgccgac gagcaattat cctgccatct
      301 atctttgaga ttatctttct gattgaaaac tactcatccg tgtaatcgga attatttgga
      361 attagaaggg aatttatggc ccctctcact ctccctctat ttgcctctgt ctccatcctt
      421 cttccccctt ctttaagagg gtcctttctt ctttcagcct tgtggatgga tacatgtgct
      481 tggcaaggat ggctgtttct ggagatgact gggccacact gtggccaagc aggggacggt
      541 gagaatgcac ttgaatagca gctgagggat gaatagctct tcggaactgg cgtgggaagt
      601 aga
//
LOCUS       KCPA01000009             565 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 1057tic ultra-conserved element locus
            uce-2689, sequence.
ACCESSION   KCPA01000009
VERSION     KCPA01000009.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 565)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 565)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..565
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1057tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>565
                     /note="ultra-conserved element locus uce-2689"
BASE COUNT          166 a           97 c          109 g          193 t
ORIGIN      
        1 accacgacat ttgtgtcatc tacatctcaa aaatccttca gtgatccaga ctgagtggat
       61 tgaattaatg gcaactttga gactacaagt tttagtgtaa ttgctttatt gttttggaac
      121 caagatgcaa tccagttcct gtgcaaacat gtttaacgtg tgttaatgtg tttcaaaacc
      181 agaccctctc cgcagaattc tgcttttcat taattgacat cagtagcatg gtacagtatt
      241 tcaaagcact ggccaaatat aaactgtgtt tctaatttcc ttactttcct gtgtttggaa
      301 tgccaatgtt aatttgttcc catggaagag tgagagctgc caaccacagt tttatataaa
      361 tggctttggg ctgccaacat taaatgatac ttaggaattt tcatgacatt ttatatttaa
      421 tgctgagaga aattgaggga gatgtatggc atgtttcaag gcaaatgttt gaagaaattt
      481 atccttggag ttcttcttat ttaggataat ctgtcagaca tgaaaagctg ttttgtaggg
      541 aactttgctg ctaacgatcc aaaca
//
LOCUS       KCPA01000010             617 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 1165tic ultra-conserved element locus
            uce-5783, sequence.
ACCESSION   KCPA01000010
VERSION     KCPA01000010.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 617)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 617)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..617
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1165tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>617
                     /note="ultra-conserved element locus uce-5783"
BASE COUNT          172 a          104 c          133 g          208 t
ORIGIN      
        1 aatgcacctc aatatggact tgcatcatcc cggctattct ggacctgagc ctttgagtgg
       61 aaattggtgg caccaagctg tgtggtgtct tggtgatgtg gcataatgtc cattgtgagc
      121 tagttagaca ccaaactcat gtcacatgtt atctgaatag acttggattt tagtggccaa
      181 aagtggaaaa gctagagcac taatctatgt gccttagctt cctataattg agcttataaa
      241 tttctttttt aaatacttat tctcttacta ttgtgtattt tgttttcctt atagccatta
      301 aagaaagccc taaggatgat gggagctcca aatctgatat cagataattt agattgtgga
      361 cttagttaca gtgttatctc ttaccttaaa aaactcagcc aacaggtagt attgatgaaa
      421 cctttgcaat tagaagtgcg ttgattattt agtttgtggt aatctcatta taaagcagtt
      481 agttgatatg ggtgtgcagc atatatgaag attggtgagc atttccacag ccgaatccag
      541 tatggttctg tagccagtga ttgtgccttc tgtaagtggt ggagaggaat gcaaatgaaa
      601 cctcttcagc tatactt
//
LOCUS       KCPA01000011             764 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 1279tic ultra-conserved element locus
            uce-2619, sequence.
ACCESSION   KCPA01000011
VERSION     KCPA01000011.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 764)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 764)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..764
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1279tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>764
                     /note="ultra-conserved element locus uce-2619"
BASE COUNT          213 a          184 c          125 g          242 t
ORIGIN      
        1 gacagcttta tggtaattct atgtaccacc ccctcccagt ccattgagtt aaaagcaaaa
       61 gcacagacat gaggcaaaca tggaaaatgc cattactgta ttttgagaaa agcagcaacc
      121 tggtgtctat gaaaatttaa taaccattga catttcttac tgcaaatcca ggacaaactt
      181 ttatttgaca acatatgtcc tttaaaagag atccataact cttcaaataa accagactgt
      241 tcttccctct ctctttccct ctctctctct ctctcaatcc ctctctgtct ccccttttaa
      301 tgcccacatc tccactatca ggaacaaata tgatttctga ttgaacatca ctttatttgc
      361 cagttctgtg gtcttttctt atcttgttcc acacttctca ggctttgtgg ttaaattatg
      421 tattaaggtc aatgtcaaaa cacggaagat ctgtaatcta cagggagctc ccttttattc
      481 gttattacag tgaaggctga gtgcaactgt cagggagctt gggatgtgct cagcatggag
      541 gcttgctaca cagcagggct ctacaaagcc tctctccttg ttctcccagg acgaaccctt
      601 gatagattta cccagataac ccatctcact ttaaagctct cttgtctctg cttcaatctg
      661 aaagctgtca agtgcaccta tatagtaatg tcataaatca aacgtaaaat gtgtacactg
      721 gagacactgc aagtgtcatg tattcacttg tactttgaga tctt
//
LOCUS       KCPA01000012             727 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 1389tic ultra-conserved element locus
            uce-3329, sequence.
ACCESSION   KCPA01000012
VERSION     KCPA01000012.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 727)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 727)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..727
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1389tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>727
                     /note="ultra-conserved element locus uce-3329"
BASE COUNT          194 a          170 c          208 g          155 t
ORIGIN      
        1 tgaggaattg ctgtaaattt tggcagaatg tgcagttgta actagtgatg taaaacagct
       61 tttgcagtgc ttggacttgg atcctttcag atctcagcca cagtggattg ggagaccatt
      121 atgagaattc ccactgggga cagcagcccg ctttcaggag tgaaggcaac tgcagctggg
      181 ataaagtgat aatagacagg actgacaagg aagcgtggcc ttccattacc ggagctgaga
      241 ctgagtctgc ctcagaatgt actacagaca ctgactctgc ctccaactgt ggctcagaga
      301 acagtagcat ggctacaggg agtgcccaag gcaacttcac tggacataca aagaaaacta
      361 atggcaataa tggcgccaac ggagcactcg tccaaagcac ttctaaccag agtgcccttg
      421 gagctggtgg agcaaacggc aacggcagct cggccagggt gtggggggtg gctgcgggct
      481 ccagctctgg cctagctcac tgctctgcca gtggtgggga tggaaagatg gacaacatga
      541 tgggagacgg tagaagtcag aactgctggg gtgcttccaa ctcgaatgct ggcattaatc
      601 ttaaccttaa ccctaatgcc aatccagctg cctggcctgt acttggacat gaaggaactg
      661 tgggagcagg caacccttcc agtatttgca gtccagtcag tgccataggt cagaacatgg
      721 gcaacca
//
LOCUS       KCPA01000013             820 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 1502tic ultra-conserved element locus
            uce-7738, sequence.
ACCESSION   KCPA01000013
VERSION     KCPA01000013.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 820)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 820)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..820
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1502tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>820
                     /note="ultra-conserved element locus uce-7738"
BASE COUNT          233 a          148 c          170 g          269 t
ORIGIN      
        1 aaaaactaat aaagtagtaa tctagagtat tttattattt agaaccctag ccttggggat
       61 gtgatttgca aggttatatc tcaattcagg gtgtacatgt gagcagcctg ggtgaatata
      121 tctgtcagtc ttttctgtag tttttttctt tctaccaaat gctgtctgca ttcagtccat
      181 agaaacacta ccacctcttt aagtggtaat gctccctgca gagtttttag cctgtaggag
      241 atatgattag ggggtgatag tgttaagcac tcctcctgta tctgctggcc cactatgata
      301 accttagggt tacaatgcat gtctgacaaa tacaattcca ttgtgactag cgccttatgg
      361 caatttagga ggcttattca tcattttaca acagacttct gtcagggatt ttgcttattt
      421 gcccttcact ggtgtacagt agttgtaggt ttatctctag gagtccagcc ctaataacca
      481 ataacaaagt acttaagctc taagcttgtg agaaatggac ttacattata ctccaactgc
      541 accttagctc tcgactgata agacaatgtg tctttgagag aaggaaggat ttgtatgaac
      601 tgatccttta cagtatggtt ggtagaagat acggggaagt acattgtgtt ctaaccatcc
      661 agatcccaga taaaatacat ccttgctatc attagaaatg tttcctttaa aatatgaaag
      721 tgaagagata tcttgccttg gaaattgcac tacaaagttg tctgtaacga tggtgtggga
      781 tttggaggaa ctgagttact tttgatgaaa tccccatgat
//
LOCUS       KCPA01000014             718 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 1616tic ultra-conserved element locus
            uce-6409, sequence.
ACCESSION   KCPA01000014
VERSION     KCPA01000014.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 718)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 718)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..718
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1616tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>718
                     /note="ultra-conserved element locus uce-6409"
BASE COUNT          235 a          123 c          140 g          220 t
ORIGIN      
        1 gaactgaata aatgggataa tctaattggc cacattgcct agcccaaagt aagtatggtt
       61 aaaaagtgca ctcttgtaat aagtaaatct attagaaact gaacttctat ttcagaataa
      121 aaattacagc aaatggggag gatgatggta gatatttact gaaaaacaca gacaatatga
      181 aaggattaaa atgctttaat cagacaaaaa agggctttgg ctacttgatt agggctgatt
      241 tccaccatct gcttatactt actgaggatc tagccctgac tgaacactaa tttgtgcact
      301 tcctagaaat tgaaatctct cagcaagcaa attaacaaga gcagggattc agcaataatg
      361 gagctcctcg gcttttgttt ccctctgaca gatggacagg gtgcgctcaa attgaattca
      421 gctttaattg cattgtgcca tttaaaattt tatctgctcc acagattttg tttacaggtt
      481 tcaggattcc aaacctttgg aaattttttc agccctgggt gaaataaaga gcactataat
      541 tctatgtgac tagtaggtgt tcattaccac tctttgccct aaagggtggc atgctgggca
      601 aagaattcta ttttcaagct ctaaattgat gggtggagaa gtacaatttt tctcactgta
      661 aatgctctct tatggactat tcataaatag aaatattgtt aaaagctggg ctagaaaa
//
LOCUS       KCPA01000015             453 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 1721tic ultra-conserved element locus
            uce-2774, sequence.
ACCESSION   KCPA01000015
VERSION     KCPA01000015.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 453)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 453)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1721tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>453
                     /note="ultra-conserved element locus uce-2774"
BASE COUNT          166 a           76 c           74 g          137 t
ORIGIN      
        1 aaaggattga tctttaagta atacatatga tattagtttt tccgttttaa aataatcaca
       61 ttattgcaga cattttaata gctgtagagg ttgctatgta ttaacatgat tcatggtcct
      121 tgacagcagt gtctctgaaa atcccacagg aatgcaaaat acaaaactcc acacacgttc
      181 aaattttact gcctgcagct aaaagagggg cttaaaactg ttgaaaccct tcaactttaa
      241 aagcattaat agatggtccc aggggattaa atctaaatct taatgtgtaa aaatcaagtt
      301 aataaccaca gagattaata tggttgcatt tgattattgt gataatgcaa acaattagta
      361 ctgctaaagt gagatatatt agcctcctac ttgccccaca cacatctgca aagcattgga
      421 aataaatgga aataaaacaa tttgctctga aag
//
LOCUS       KCPA01000016             449 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 1824tic ultra-conserved element locus
            uce-3106, sequence.
ACCESSION   KCPA01000016
VERSION     KCPA01000016.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 449)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 449)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1824tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>449
                     /note="ultra-conserved element locus uce-3106"
BASE COUNT          157 a           52 c           74 g          166 t
ORIGIN      
        1 tttgagttac atttcagtaa atgattgcta aagacatcat actaggaaca tatgcaatgt
       61 ttttattaca tagttctaca gaaagttaca gaattctttg ggttctttgt aatttactga
      121 attggtcaaa cacaaatgac caaaagttgt tataacatag ataatttttg ttctattcca
      181 gatacggaat gaaaatttgc atttaaaatc tttgtgaatg ttttcagaaa tgaatagata
      241 acagtactaa accgaagtct ctaaagttat gtattcataa tattgcatag tagtatgctt
      301 aggctttact atgtactagc cttttgttgg atttgtgtac gtattttacc tatgggtttt
      361 aatgataaag tgtatgactg ctttgcatat aagtccttat gactttaaga tgttaaaaaa
      421 taaagaaatg gaatggtctt aaaaaaaaa
//
LOCUS       KCPA01000017             497 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 1930tic ultra-conserved element locus
            uce-5837, sequence.
ACCESSION   KCPA01000017
VERSION     KCPA01000017.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 497)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 497)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1930tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>497
                     /note="ultra-conserved element locus uce-5837"
BASE COUNT          133 a           98 c          121 g          145 t
ORIGIN      
        1 agagatggca ggaaagcttg ttgcattttg tcttgagtaa aacactcaag cccccagtcc
       61 ttaatggatc agtactttgc ccgtatgcgc tccttgatgt caagtaagga attgccagca
      121 aggattcgtt tcctgctgca ggtatgatga ttttcctgaa caattgtctt gaattctttc
      181 aaggatactg tggagttgag agaacacaac tgggttcctc gcaaagcttt tcttgacaat
      241 ggaccaaaga ctatcaatca aatccgtcaa gatgcagtaa aagtgagtgt ttgctgtaca
      301 cttgggagta gttaaccaga tgggtttctg tagttctgac caaaattaaa aggatctggg
      361 agtttttatt cctgctccta tgtctcaagg gatgagaagc gacttctttc tggagggacc
      421 ctttatgcca cccaggatga aacttgacag ggacccactt ggagggcttg ctgatatgtt
      481 tggacaaatg ccaggta
//
LOCUS       KCPA01000018             420 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 2038tic ultra-conserved element locus
            uce-6596, sequence.
ACCESSION   KCPA01000018
VERSION     KCPA01000018.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 420)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 420)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2038tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>420
                     /note="ultra-conserved element locus uce-6596"
BASE COUNT          138 a           55 c          102 g          125 t
ORIGIN      
        1 aggctgctct gaaacagcaa gaaagggaaa tattacagca taagtattga ttgctgcatg
       61 cagaggtcac tgtgtgggga ttgcactttt atcacaaggt tcttgtgaaa ggtgaagttt
      121 tggcaagatc ctaatagtaa ctgtggagtg ctagttgggg cagggggagg aaaattattt
      181 tttattctta gtacctcaag gctatacatg gcaattacta ttgcagaggc aataaagaag
      241 ttgttaatta caggttttat acccttgtag cccaaagtaa gaatgaaagg actaaaggtt
      301 acaagaagaa agaaattgct ggaggctttt tagtgaaaca agttgtagtg ggttagaagg
      361 gcaatttcaa tttgataagg ataaaaactt gaaatcttac ttgctttatt acccttcata
//
LOCUS       KCPA01000019             635 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 2148tic ultra-conserved element locus
            uce-4751, sequence.
ACCESSION   KCPA01000019
VERSION     KCPA01000019.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 635)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 635)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..635
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2148tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>635
                     /note="ultra-conserved element locus uce-4751"
BASE COUNT          213 a          120 c          116 g          186 t
ORIGIN      
        1 ttattaagtg gaccatggcc ccgattttgc ttgttttgct gctgttcctt tgggacaaga
       61 gaggtggcct tgttcacacc attgactttc aacatggtga gcaagattta aagaaatata
      121 aaccccttca gagaggaagg gttacacagg aaagctgaat aatgggcttt aaaaggcaaa
      181 ccaaacagtt aaataaaaat gcacacggca tgctaaaact taaggaatgc atattcaatg
      241 caatgcatta ttaaatacaa cggtgaacat atgggtgcct acaattaatg tatataaata
      301 gctgataaaa ttgctcagta ttagaaagct agcggcaaaa atgacctcat atgtcaagca
      361 gacaagcagg cagttaccat tttctttgta caccttacag atgataaatt agttttatgg
      421 tctgcatggg gcccttatca cattacagca ccaagtgttt gataaagaaa aaaaatgcct
      481 cagctaaaaa tcgaactgaa atttggagtc cccgtagacc tcaaacgtaa agaattttaa
      541 ccaacttcct tttggaaaga tttattgctc taaagagaaa tgtgtatctc tatcctatgc
      601 gcttttatta caacttcttc tcttcccttc ttctt
//
LOCUS       KCPA01000020             634 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 2253tic ultra-conserved element locus
            uce-5238, sequence.
ACCESSION   KCPA01000020
VERSION     KCPA01000020.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 634)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 634)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2253tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>634
                     /note="ultra-conserved element locus uce-5238"
BASE COUNT          202 a          130 c          131 g          171 t
ORIGIN      
        1 gctctagtat aaatcaatag atggcgatac gagtaggatt tctataagac cccatcttgc
       61 agctataaat ggaaaagcat gtgaacatct tcaatagagc tgaagtttaa tattactatc
      121 caaattccct tttatcccac tgtcactgcc accaaaggag gggttttatg ttggagataa
      181 tatgatactg cagtataagc cctcctcaga tttcaaacag gtcaacttgt caaagctttt
      241 taagggagcc aattacatta attttccaca gcagagaaat acatatttca tttccatctc
      301 ccactagaga tggggcccag ggattctgtt tcgaaaggct cttatcacta agtaacattc
      361 gtacccccaa aggaaccttt ggcagtcact ggtccattga tataattgag caaggtatga
      421 gctgtctgac actgccatgg cattgctcaa tagcactgtg cactaagcac tcggaacaat
      481 gaggcttcag cagacggctg cattgtcaat aaatttcaat tacactaatt gccaagagtt
      541 caatgagtgc actttcaaag gggaggggga aggacggatg gaagattcta tgtctaccag
      601 agctaaagaa taggatgcaa taaataaact gcag
//
LOCUS       KCPA01000021             701 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 2365tic ultra-conserved element locus
            uce-6014, sequence.
ACCESSION   KCPA01000021
VERSION     KCPA01000021.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 701)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 701)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..701
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2365tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>701
                     /note="ultra-conserved element locus uce-6014"
BASE COUNT          212 a          153 c          148 g          188 t
ORIGIN      
        1 ctttccacaa gcaaacaact agagacaagc tcactccaaa tgtatgttct ctcatgtttc
       61 aagcacttgc tctgttcttg ctgaatgttt agttacggca aatggatatg tggaatgaag
      121 acatttcccc tttgacttgc acatttgccg aaggtatgtc aaggatctga ggcaaggggt
      181 atgggcaagc tttcaagaaa gttccccccc cttctcctat gcttgcttat tagaagagca
      241 ataaatatca agcagtcaga cccttctcac agttacaaag cctacctgta actgagctgg
      301 ataattagca gccttgaaga tgatatatga ctttcattac cctttgggac tggagactaa
      361 atgaggacag agctaattgc cgtgcaaagc agtttggcat gaatgagaaa aatgcaggcg
      421 ctgtctcctg ccaaaaaagg gccctattgc tgctctgatc tcatggctgg tttttgccgc
      481 aggagttcac ttggtgtcca taaatcatgg tctgcttaca gctgaaactg cactgagtca
      541 tcaacatgca ataagctgag tgacagattc cagcctgact acattagaac ttcagactta
      601 aacagaaaat taaacccaga ctacacagac atgaaggctg tgagaaacac aaggcttgtt
      661 tacttgacaa tagtaagact gatgtttcca ggaaataaca t
//
LOCUS       KCPA01000022             811 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 2477tic ultra-conserved element locus
            uce-4036, sequence.
ACCESSION   KCPA01000022
VERSION     KCPA01000022.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 811)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 811)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..811
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2477tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>811
                     /note="ultra-conserved element locus uce-4036"
BASE COUNT          250 a          152 c          165 g          244 t
ORIGIN      
        1 gaaagattat cctaatttta ttagtgctga gtgtctatgt tgttcttagc atgtcacctc
       61 acttgttcaa cagaaaacta agctatacaa catattgatc atctggcaaa ccaaagtagt
      121 agtgatctgt aatccaccaa gcatttattg actttatccc agttcagatc cacaaatgca
      181 aatcaatgct gtataatact attttaaaga ttagtaatta tgtagtgggt ccgatcaact
      241 ttccccctaa atgtatccaa aaataaaaca ctctaaacat tttacaaagg agaaaacgga
      301 gaagctgatt taatggtcta atgaggccat cttccagaga cttgttttgt gtagggcttg
      361 ctttgacctt tcgctttgct caggagccca acgcttcatt tttcacattc ttgcaattac
      421 gttaacgctt caagcatttc tgactccaag tcagctagca acaccaggca taactcaaca
      481 ctgtgagttt ttctcctctc tgtagattca ttaacaggtc accggggtcc caactgaaat
      541 ttaaaactga ctggttctgt tgggttagct gagttatagc aagggagatg gcaggaaagg
      601 gggtgagaga aggggagggg aaagagagga ccctggggtt tttgccaagg aatatatgtg
      661 taaaaactct aagtggaaga ttaaaaggtg tgtgtagctt tatcatccac tcttttcttt
      721 ggagaggaaa aaacacatct gaaagtcttc tggggtatgt tttctttatt aaacaaagtg
      781 aaaacagcca ctgcctttac ataaaaggct a
//
LOCUS       KCPA01000023             583 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 2587tic ultra-conserved element locus
            uce-3046, sequence.
ACCESSION   KCPA01000023
VERSION     KCPA01000023.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 583)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 583)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..583
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2587tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>583
                     /note="ultra-conserved element locus uce-3046"
BASE COUNT          177 a          103 c          100 g          203 t
ORIGIN      
        1 aagaattatc tgagttatta aaattattta agacatgtta atattttcca tattaggaag
       61 ctgttattat gctgtaaaaa cctatgatgg tataagttgc tctcttacat aaataaataa
      121 atgactgata ttactgaaag ctttaagctt caagaaaaaa atggaagaag tcttttatcc
      181 tggtttttag agggcatcag cagcttgctt ttatgaaaaa gtaacagcta aatgcactgc
      241 aaataatttg cagtaatcca gttcagtgat tcatgtgtct gctttaatgg gtcataattc
      301 aggataaagt aactgagtgc agtcagagtg cagacactgc ttatgccagg gacagtatct
      361 cttcataaaa cacacctcag cagaagcagt ttgccagccc cctaataccc tctgatgttt
      421 tgatgtcctg catatttttc cgattaagtt ttgagtgcca tgtttttagt tgtatttcca
      481 cattcattat cctcacgtag acccttcagc gggtttgcca tatatgatta tttttttaat
      541 gatgcctttc tttccacttc agcagtttaa taatctagca cat
//
LOCUS       KCPA01000024             402 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 2692tic ultra-conserved element locus
            uce-2833, sequence.
ACCESSION   KCPA01000024
VERSION     KCPA01000024.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 402)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 402)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2692tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>402
                     /note="ultra-conserved element locus uce-2833"
BASE COUNT          124 a           65 c           60 g          153 t
ORIGIN      
        1 atgagcctga cttgtattta ctcttctttt ctggaagaat tagcttgttt ctcatagctt
       61 atgggaaaca ctaatagtaa tgaagcagaa aaatgataaa tgttaaaact ttaaagtgat
      121 atgtagatgg ttgtaaatct ctttgttgtc catgtacttt tgatggtctt tcaaagtttt
      181 aaacttccta aattttagac agagcagttt tatttctttc aagctacagt ggaaataatt
      241 tccttatcta tcatttacaa tggtttaata ctttcattaa ttcacacatc ataaagcagc
      301 gagtgatttt tatacatatt caaatcactc attgtgcctc tcagcaaatt ttttctgatt
      361 ctgaagttaa acttagggcc agtatctcca caatctaggc ta
//
LOCUS       KCPA01000025             520 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 2804tic ultra-conserved element locus
            uce-6082, sequence.
ACCESSION   KCPA01000025
VERSION     KCPA01000025.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 520)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 520)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..520
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2804tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>520
                     /note="ultra-conserved element locus uce-6082"
BASE COUNT          174 a           95 c          102 g          149 t
ORIGIN      
        1 agtagataaa tggaaaagga aatcttaata aggttctttt ttggaggctg ctgtattaaa
       61 ttaaagtcac acataggttt caaagaaaat cgtatgtcgg tggaatggtg agcccacctg
      121 acaacgcatg ctaacagaat tgtaaatgta aagggtaatg cttgtcactt cctgacagct
      181 ctaaatggcc ttttagttca gtacgcagag ctgtcataaa aaaacataaa aatgcatatg
      241 cagacagctg aaactgcaat gcacatcatt atctgcaaat ggtataagta tcctgaacaa
      301 agggccttcc agtttaagga caagcataag acatttttct gcctctagcc ttaaaacaaa
      361 gtgctgtcaa gaaaacaaga ttctcagtgc cagaactgag gattttctgt caatcagcaa
      421 ggtgctacat ttgtacatat ttttctgacc ccaaatatga gaagagcatc cttaacagat
      481 gtgtatttaa cttctggcag atacatctgt ttcttctgtg
//
LOCUS       KCPA01000026             546 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 2914tic ultra-conserved element locus
            uce-3942, sequence.
ACCESSION   KCPA01000026
VERSION     KCPA01000026.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 546)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 546)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2914tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>546
                     /note="ultra-conserved element locus uce-3942"
BASE COUNT          156 a          121 c          114 g          155 t
ORIGIN      
        1 gtcagcctca ttaactttct gctcccacag ccacccttct acagcaggaa caccgcagaa
       61 atgtacgaca atatcttgaa caaacccttg cagttgaagc caaatattac caactcagct
      121 agacatctcc tggaaggcct cttgcagaag gacaggacaa agagacttgg tgccaaggag
      181 gactttgtaa gtgcagactg gccagggtta ttgggactgt ttacatttct cttaacagat
      241 ggagattaag aatcacatct tcttctcacc aattaactgg gatgatctca ttaataagaa
      301 gattacaccc ccttttaacc caaatgtggt acgtactact tctaattatt gaggtgccct
      361 ggagccaggg ggatggctgt gtttggggaa tgcaacttaa acaacattgt ggtaattgac
      421 tttttgctga tgatccttct aaatttagtg ttgtctcaca tgcttcattt gcatggcaat
      481 tttaaaataa tccccagccc attttaccag gttaagggtg tagaggacaa gtaatttccc
      541 tagggc
//
LOCUS       KCPA01000027             642 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 3021tic ultra-conserved element locus
            uce-7865, sequence.
ACCESSION   KCPA01000027
VERSION     KCPA01000027.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 642)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 642)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3021tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>642
                     /note="ultra-conserved element locus uce-7865"
BASE COUNT          171 a          146 c          133 g          192 t
ORIGIN      
        1 tggtgaggta caagccagtc caggtgatgt gctgttcttc atttaactgc ctgagtccaa
       61 cattgcgtcc ctatagatac atgtaagggc caatgaagat aacagtaatc cttccctctg
      121 ccttaccaga ctctcggggg atgtcagtcc ataggttgtt agagcttcct gttgttttgt
      181 gcttcctgta gcagaaacag tatgcacctt acttgtccag attacctcta ccttccttgt
      241 tcctcccaga aatcacctgc taagaagcta actaatgcac ttagcaagtc tttaagctgt
      301 gcttccagcc gtgaaccttt gcacccaatg ttccctgacc agcctgaaaa acctctaaac
      361 ctggctcata ttgtgtaagt atctatatgc tgtagacaaa gtaagcttcg ttgctctgaa
      421 caaagcagga cgcagatttg tccagctcaa tgcatcacaa gtgcaaattt gagggatatt
      481 tagtgaaaag tgttcttctg gtgtgattta aaaatcaatg ggatactggg acacaacatt
      541 gcaatgtcaa ttctcctcaa gagatgtcca tgcaatttca tggagtttca gcactttggg
      601 atgtattgat gctgagaaca tcagttctgt catctagaga ct
//
LOCUS       KCPA01000028             690 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 3129tic ultra-conserved element locus
            uce-5699, sequence.
ACCESSION   KCPA01000028
VERSION     KCPA01000028.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 690)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 690)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..690
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3129tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>690
                     /note="ultra-conserved element locus uce-5699"
BASE COUNT          187 a          133 c          131 g          239 t
ORIGIN      
        1 ttctgtccct gcactgggat gatgggtgcc tttcttttcc caacagccag ctgcgccatc
       61 aaaaacaggg ttttcaccag tttaaggaaa tggtgacact gtctctgtga actttttgga
      121 agcttatctc cagctgtaca gtagggacag ggcttttgtt taatggaaat gaagcgtatc
      181 tttttcttac agatgcacca ctcgctactt tttatgtgcg ttttaggttt ccctttttat
      241 tttttaactt attaactctg acaagtaacc tcttggttgt gaacaattta attcacaatt
      301 catttttctg attcaaagtg aacacgagtg ccctaatccc ctaatgggaa ttaattgcat
      361 gtttcaatgc ttaactctga tcctttctca atccccactg ggacaagttt cttcctgaag
      421 gatctgtgtt tgttattcaa aacacaatct gaaaggtaat gaactcgggc caactgaata
      481 ttaatgcttt ttttattgtg agggaatgac ctgtttatgt cgtaaattac tctgaagtat
      541 atctgataaa atacaaaaaa tcagtgtgtt cttcccctaa gtgaaagcag tttgccagta
      601 aatgaaggca cacacttttt gcttggaaag ctgtattttg atacagagaa aaactgtttg
      661 cttcatcaaa ggggaaattg cttggctact
//
LOCUS       KCPA01000029             481 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 3237tic ultra-conserved element locus
            uce-2758, sequence.
ACCESSION   KCPA01000029
VERSION     KCPA01000029.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 481)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 481)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3237tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>481
                     /note="ultra-conserved element locus uce-2758"
BASE COUNT          137 a           63 c          120 g          161 t
ORIGIN      
        1 attatttgaa ttagaaaact ccttcttgat aaaagtcaag ttcagtggct catctgagtt
       61 ttcagatgat gaagaaacac tgttgtgttc taaatttaca ctattagatt ttgttttgtt
      121 ctttgtggct ataatacttt tgggttcctt catttgtttt ggtaaagaca agtccaatgg
      181 ctcagcctga agctcctcag aagagaaact gtttggagtg taagaactac tgtgggagtt
      241 tttagaagat gtggaagaaa gatttaaagg agaaggagta ttgctcctag agtggtccaa
      301 tttatcaact ggcttaatat tggtaaaatg aggaggtttt gttagcctga gaggagtatc
      361 acaattagta acactgttat ggagttcagc tatagatggt gaagttatag agtccacagg
      421 ctttattgga gatctggctg acaaagagtc tttagtggga gtgttgttgg tggcagccag
      481 c
//
LOCUS       KCPA01000030             567 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 3344tic ultra-conserved element locus
            uce-3823, sequence.
ACCESSION   KCPA01000030
VERSION     KCPA01000030.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 567)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 567)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3344tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>567
                     /note="ultra-conserved element locus uce-3823"
BASE COUNT          197 a           85 c          100 g          185 t
ORIGIN      
        1 aaaattagaa atgctgacca ttattgaaca ctcaagaaac aattgaaaaa tgcatgttta
       61 tgtttagcat tttaaaaatc tatagaaatt tatattgttt gttctttgct tttctctgat
      121 agttagaaaa cagctgttct attgctttgg actttgactg gctagattgc aaggctcaat
      181 aatctgtctc ggctcagggt taagtgatgg aattcattta aatgccccag aagtaatcat
      241 ccacaaagag tacattattt cttttttatg aattttcaaa cctaatactg atgggtggca
      301 tgcaattaaa cctgatcaat atgtaattta ggtgggctga catgttttca aattctcaga
      361 atatagattc tttcaatatt gcaagagctt agtgaaatac tcagccctta tgaaagagcc
      421 aaagcagttt agtacagtgc ccgttccaaa gacaaatggg gaagaaatta aagttacaga
      481 cgctaacaaa gaaataaata aggaggcctt tcttaatagg ttcaaagcaa ccattttgat
      541 agaaattaac atgtatatgt aaagttt
//
LOCUS       KCPA01000031             577 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 3451tic ultra-conserved element locus
            uce-4344, sequence.
ACCESSION   KCPA01000031
VERSION     KCPA01000031.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 577)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 577)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3451tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>577
                     /note="ultra-conserved element locus uce-4344"
BASE COUNT          160 a          130 c           82 g          205 t
ORIGIN      
        1 atgcttttta ctgacctatt atttttcttc atgattacta aatgcacaca gacatgaatc
       61 aaaacactta taaacaagaa gtttttctct ctacctgtac acagtgaatt ccctttacat
      121 ctcattttgc tctccctcag cattgattga ttgattgctc acagcttgcc ctactccctg
      181 ctgccctaga tccatctcgg ctcttcacac tccataccgt tcctgcatca ttgactttct
      241 gccagccatt ttgctgccag tgcatgagct gacatttaat gatctttaga cgcagtaatg
      301 tcacatttat cactatttat cagttgtgac agacctaaat tcaaatgcaa acatgaaatg
      361 cagactgaat tcagtccaaa cagtgatatg tttttgagtg acatccatca aggcacatta
      421 agaagtgaaa aattacctgt ttcctgttat aactagcagg ggtttagctt tctcttgcag
      481 ttttcagtga aatcccattc ggtttccaaa atgtcatctc atatttgaat gttaattttc
      541 agtattccta gattttacat tttcaattta attgaat
//
LOCUS       KCPA01000032             775 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 3563tic ultra-conserved element locus
            uce-3725, sequence.
ACCESSION   KCPA01000032
VERSION     KCPA01000032.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 775)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 775)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..775
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3563tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>775
                     /note="ultra-conserved element locus uce-3725"
BASE COUNT          251 a          148 c          196 g          180 t
ORIGIN      
        1 tttaaaatgt ttagcagctc tcctgggcgg tttcgatata cctgaaatca gtttgttgct
       61 tcagactttg agctccatta ccttgcaaac agcaatacac agtcatccac gtacgaaggt
      121 cttacctaat acaccactag gttcaatagg gtactcaagg attgatgtag ctggtgccag
      181 cgtgtagggg tattcatacg gcgtgtaaat taaaccggcc tcgggtccgg gtggaactat
      241 tgcagcggtg ggatgaggag ttccgtttgg catgacagcg gtttgtattt gtctgatcaa
      301 aggcattatg gtagggccag ctggcgtagg agtacgcagg gcagctggtg ggagaacagg
      361 cgcaggccca gtaataatcc ttggagcctg ggctgttgct gcaagagaaa aggcaagggc
      421 tgctacagta agcaaagaaa ttcagaagaa agtatggaga tagcagtaca aaacgtggaa
      481 agaatgggaa aaagtaggaa agaagaaaaa taaaaggaaa tcattagtac atgcgctgat
      541 cacacagtgc caaagcacac cattcaaatg caaacagctt tccattttcc agtgtgatta
      601 agtatgaaca tgcaaaacaa aaaagccatt gtaaaacagt gaggtagatt tctcaaacag
      661 gttacacagc acgaaagctc catttagacc acatttcttc atttatgcta tcaagactgc
      721 atgagaccga gatgcatgca ggaaatacga ggaaaatact gtctacagag tacaa
//
LOCUS       KCPA01000033             406 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 3764tic ultra-conserved element locus
            uce-848, sequence.
ACCESSION   KCPA01000033
VERSION     KCPA01000033.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 406)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 406)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3764tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>406
                     /note="ultra-conserved element locus uce-848"
BASE COUNT          126 a           70 c           62 g          148 t
ORIGIN      
        1 tttcatcctt ttcagttgca ggaagccacc caaccacaga acactcgtat gccagtggta
       61 cttagtacct cttgtatata ggttattgca aatattgttc tgaaatgctt aacttcagtt
      121 tttttaagta attaattgtt ttaaatctat tttgtaaaga tataaaaata caatagaatt
      181 tctggagtac agattaaact atttgcacta acacacgtga tgtgcatgat ttaataaaat
      241 aactttactc tccctatgca tgtttgagtt gaatgtcatt tgaaaacaag agattcatgc
      301 taagtttctt ttgcactaga tattgccaca gttactaggc acaatgtctg cagcatgtcc
      361 agtaagagca aaagactttt ttttaccttt tatttcacat ttgtgc
//
LOCUS       KCPA01000034             607 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 3872tic ultra-conserved element locus
            uce-2746, sequence.
ACCESSION   KCPA01000034
VERSION     KCPA01000034.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 607)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 607)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3872tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>607
                     /note="ultra-conserved element locus uce-2746"
BASE COUNT          188 a          106 c          107 g          206 t
ORIGIN      
        1 tcttttagta tctaattttt tttaatatct atttattcat tttatagggc tgcttgcctc
       61 ttattgatta aggtagttgt gaatccataa cagaggacag acttatgccc taaggagtgg
      121 gattgtatta tgcaaataat taaaaaatat ttttaagcag gcattacttc agcatttaga
      181 tattggctaa agcagcttta atatgcaaga caggatgtta ggtgcttagc tgatccaaat
      241 gccagtctat agatttgaaa gactaaagat cacatcactg ggaggttgac agaagtgaca
      301 ctttgcaaag tgccaatgat ttatgccaat gtcttgcttg atgatactgt tatagacagc
      361 actgtcatta caaagtccct aacgacttca gtctacattt atggtgcaca aattataggt
      421 gagcccaaag atcgaaacct tcctgacttt tagatttcaa tgaccaagta attctcacta
      481 ggttcacttc ttgtgtgttg cctgatactt ttctgtttca gcatcataat tagatcacag
      541 taacaaggac aaaacatcat tctgtgtttt ttagccttat cttgcaaaca gtaaaatgca
      601 ctaaact
//
LOCUS       KCPA01000035             590 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 3979tic ultra-conserved element locus
            uce-2030, sequence.
ACCESSION   KCPA01000035
VERSION     KCPA01000035.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 590)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 590)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..590
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3979tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>590
                     /note="ultra-conserved element locus uce-2030"
BASE COUNT          199 a          116 c          101 g          174 t
ORIGIN      
        1 gaatactaat gaaactcctt agttagcttt ctttgtgata agaataaaaa attggagcta
       61 tattcctcta gaatctcaag caatttttgt cctttattct gatagaaaga ttactgacag
      121 tacggaagga gagcaaagta atttcataaa atatctgcat ttttaagaat gcttttgttg
      181 caaaaatgtt ggtgtgcaat ttcttcaatc tacttttaaa gctgtaaaga aaaagtacct
      241 atttgttctg cactgcaaca atgccagctg cattcaatca actaaaaagc tgcaagccat
      301 aaaccttcct ccacagctat agaagaaaaa aaggcagggc cataaaaatt catcaggata
      361 atgtagagat gaggcgtgtt tgaatcacca tccctgcaat caaccaatca ctcatcctgt
      421 ggcatttaca gcacatctca ttcccctgtt ccttaaggac aattgatttt cctgattcca
      481 ttagcataac ggcaaggaaa atgactgcag tgcaatattt ctggaaactt ccaacaagta
      541 tgctgtgtgc tggagtgtga ccataataat aagctaccta gctagcaact
//
LOCUS       KCPA01000036             680 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 4087tic ultra-conserved element locus
            uce-5645, sequence.
ACCESSION   KCPA01000036
VERSION     KCPA01000036.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 680)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 680)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..680
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4087tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>680
                     /note="ultra-conserved element locus uce-5645"
BASE COUNT          211 a          136 c          124 g          209 t
ORIGIN      
        1 tttgcacaac tagatttgcc cactttgcca catgtgtcca cagaataaaa accttctctg
       61 ttttgaacca atttgtttaa agattagtgc ataaacccca gaaacagatg gcacatttag
      121 caaaaaagca aaatggaatc accttcagga actttgacca tttaggagtc tggatgggta
      181 ttgatttgag gcgaatattc taaagtttgc attacccttt gaaaagtgct aatgtagttc
      241 ttgtcacttt aaattaactt tagatgagag ggactgacag aaacatgagg atgtgtgaac
      301 tatatttgac tgatattctg tcaaatattg catggggtta tgatccacaa cttttcccat
      361 ctgctgctca aacctgaatc cttgaatgca caatggatta attaccatat tttgttctga
      421 tttcacttaa aagactgtga atgttaaatg tacccttact tgccttcttt ctaagggtaa
      481 ggtatagagg agggaacagg gtgttcttta gcagtttaca cccacctaga atgacacctc
      541 ttctcaaata attagattcc cagaagttaa ccagagtaac acagcactca gaatttcatt
      601 cagtcctttt ccccctcagt aataaaagca ggagtgctga tgtagcacat tccatccgct
      661 gcactttaca agcagcagta
//
LOCUS       KCPA01000037             684 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 4197tic ultra-conserved element locus
            uce-539, sequence.
ACCESSION   KCPA01000037
VERSION     KCPA01000037.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 684)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 684)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4197tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>684
                     /note="ultra-conserved element locus uce-539"
BASE COUNT          219 a          131 c          113 g          221 t
ORIGIN      
        1 cccacagcaa tagtaatttt actttgatct catagcagcc aaactattaa atgtaagcat
       61 ggtcataagc aaggtacaag gcaggcacag cctatgattt ctagtagaag gtcataaccc
      121 agattttttt tttaaataac tattacaatg aggaacagag tatagccaca aaaggaatag
      181 ttataattta tgcctgactt acttcagcag aatatagttt atttataaac tgcttatggc
      241 aaactctgta tgcccctgtt ctatgcatgt gctgaactgt cttctggtaa attatttaaa
      301 ttacacctag cagtaattcc tgaggacttt catacttcat tttctctatt aatgtaacag
      361 ggaaaagctg ctttgcaagg attgctctaa attcccagag tgtgagttcc aaactctgta
      421 tgtgttgcat tatgcctgtc aaaaaacttg tcttctcctg aaatttatta ctgaagtctc
      481 tccactagaa ctactcattg aagccttacg gaaagctcat acatgattta agaagctaac
      541 agcactgaaa gaaataggtc aggtccctga atttaagcta ccttcactta ttacttatgc
      601 aagattatgc ataatttagc acactgctga atatgcaagg gcagaataat tgtttaccaa
      661 aatatttact ctgtgttcgt acct
//
LOCUS       KCPA01000038             841 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 4310tic ultra-conserved element locus
            uce-987, sequence.
ACCESSION   KCPA01000038
VERSION     KCPA01000038.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 841)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 841)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..841
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4310tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>841
                     /note="ultra-conserved element locus uce-987"
BASE COUNT          297 a          149 c          131 g          264 t
ORIGIN      
        1 ctgtaaccct tctatacttc caccaaaaaa tgacttgcaa aattaaatgt attctttcac
       61 tactttgcat atgtagtgct atccaaaagc acagtaaaaa tatactccat gataagacct
      121 acacacaaaa tgttaaaaag tacactaact tttactaaac gttacaatca atgatgtaac
      181 ttatgtaagt agggttgctt tgtcatatat tgatagttac ctcactttca catccacatt
      241 aacttgattt taaatgcaat taatacatat agtcaaggaa gactaatgga ctacattctg
      301 cacttaacct ggtggacatt ttcaaatggc acaagtgacc agtgcaaacc tattttgcat
      361 tgtaaacgac taaataaatc ttaatggatt aagaatgatc agctatcaac acacaaggga
      421 aattaagtgc tgaaatgcct acattgatta ttttaaatta ttagccttac tctgttcttg
      481 aatttgtatg cttttagtga gctttaacac atttacaaga cttattgact ataattacaa
      541 gagaattcaa gtaatggaca catcaattat aagcaacatg tcttgaccag acagttgcat
      601 aaagaattct aaagagagct ccattagcat cctccccctt agttttattc agttttatct
      661 gccgtaagag ggcatattaa gggcttatac agctgttctg accatgtgaa catgagcatc
      721 aaagacttaa cactgcattc gaagttggat attagctgaa gcaatacaga taactacgct
      781 attgacagga cagaagtaat gctgaaagta ttaagtatgt gagttattgg tatacatgaa
      841 t
//
LOCUS       KCPA01000039             593 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 4420tic ultra-conserved element locus
            uce-1232, sequence.
ACCESSION   KCPA01000039
VERSION     KCPA01000039.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 593)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 593)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..593
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4420tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>593
                     /note="ultra-conserved element locus uce-1232"
BASE COUNT          170 a          125 c          118 g          180 t
ORIGIN      
        1 aaaatccagg cactgccaaa aatttttttt gtactctgca gtttgtttta cttagggaaa
       61 cggcctggtc ataccctgca gcatgcattc attacagtga tctttgactg gcagatgcag
      121 agtaataaga tgcatatttt agtgcttatt ataataccct gtccaaaaac aacttgacaa
      181 atttgtgatt tcgacagtat ctcattttgc tggctgcagt gctctgtgat tgcctggtcc
      241 acgtggcttc cagattatgc ataccaccaa tactgctcat taaaatggcc acagttcacc
      301 agtttcggta gcttggaacg aacttggaat gaattatgat acaacaaaga ggctgctgtc
      361 atgcagaaca aaagacaagc aaaagagagc ttcggcttaa tgaggctaag tgagtgtctc
      421 ccctgcatca ccagctactt gacggccttt gagcatggat ttttttctcc acaggccaaa
      481 acctttggtc tattattttg tgtttatgca ccttgaggct aatatacatt ttaatatgct
      541 gcacatggag aaaaaaatca gccattagat tagaacatgt gcactccctg tta
//
LOCUS       KCPA01000040             394 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 4518tic ultra-conserved element locus
            uce-6373, sequence.
ACCESSION   KCPA01000040
VERSION     KCPA01000040.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 394)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 394)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..394
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4518tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>394
                     /note="ultra-conserved element locus uce-6373"
BASE COUNT          117 a           93 c           80 g          104 t
ORIGIN      
        1 aggaggaaga ggaggaggag gaagccagcc cgcctgcctg cccccatgct gagcctgagc
       61 agactttgtg agaaagcttc tctccatctg cagcccagcc cggtgggagt caattaattc
      121 tgaataacct aaaccgacag aggtatttgc attcacaacc tgactgatga ccgtataaaa
      181 ttgatttatg aattgaagta ctttccctcc ccttatcccc aattcaagcc ataattgatt
      241 atacgtgctg cagcgaaatt aaagaaagga aaaaagaaaa gaaaaaaggg aggctccaca
      301 gacgctgctc tatattctca aggtttcctg ggattagccg atctattctt ttttttattt
      361 aaaaagttgc ttcctttacc ctcttcacca actt
//
LOCUS       KCPA01000041             623 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 4625tic ultra-conserved element locus
            uce-5630, sequence.
ACCESSION   KCPA01000041
VERSION     KCPA01000041.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 623)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 623)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..623
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4625tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>623
                     /note="ultra-conserved element locus uce-5630"
BASE COUNT          205 a          145 c          101 g          172 t
ORIGIN      
        1 cttaatctaa aataaattct tcacagataa agcctccaat ggcagcctta gctctaggat
       61 aagtgaaaca ttcttccctt caagtaacag tgtacctgac tgaagtgcaa gcagctttgc
      121 tcatctcctg tttgtttccc aaatgtggac aacaacaatt cagctgtagt gcaatttgct
      181 ataggttaag ttcctcagca atgtcctgca tgctttcagc aaatactaca actgaccatt
      241 tgcggctgca atcagttctt gaaaagtatt ttcaaagcag cgttttaaat cgctgtaagt
      301 taccacaagt acactcttct catctctgga aatgaggctt attttttctg gcacaccagc
      361 atctaactgt aacaagaatg caaaagataa aataaaagaa gtgtgaaaga aatggcaaaa
      421 catttcccca acaacaaaag caatcaattt cttggcaagt acactgttat ggcgcagttc
      481 aaatctacta acaggacaca aaagagggat ctgaatggca ccacaacaac atcctcgcca
      541 aaaaatcgag acattttggt ctttacctga tggacattcc ccattgtttc cttccctttc
      601 cacaaagcca ataatcctgc aat
//
LOCUS       KCPA01000042             726 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 4734tic ultra-conserved element locus
            uce-4107, sequence.
ACCESSION   KCPA01000042
VERSION     KCPA01000042.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 726)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 726)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..726
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4734tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>726
                     /note="ultra-conserved element locus uce-4107"
BASE COUNT          173 a          224 c          152 g          177 t
ORIGIN      
        1 cagcctgact catgaccctt gaacacttca ggttggcaat gctgctccct ccattggcat
       61 cagtggagtt agaccaggga tgagtttggc ccagcgcttc taaaagacag atgtatgact
      121 ctgctccttg caatgtgttg cttgatatga tctgctgttc tcttgggggc caaaagaagt
      181 gggttatctt agaaaattct atcatcacgt gatacaaaaa atggtattta cagaattgtt
      241 ttcccccgtc ttttgttata attttttagg tgcttcagag ctgggcccat tttcagatcc
      301 caggcagttc acaagcattt catccctcac tgagagccgc ttctccaacc cacgaatgca
      361 ctatccagcc acctttacct atacaccgcc agtcacctca ggcatgtcac tgggtatgtc
      421 cgcaaccact cactaccaca cctacctacc accaccctac cccggctctt cccaaaacca
      481 aagtggacct ttccagacca gcagcactcc atatctctac tatggcactt catcaggatc
      541 ataccagttc cccatggtgc cgggagggga ccgctcccct tccaggatgc tcccgccgtg
      601 caccaccacg tccaacggca gcacactgct aaaccctaac ttgcccaccc agagtgacgg
      661 ggtggaggcg gatggcagcc acagcagctc cccaaccgtc ttgaattcta gtggcaggat
      721 ggatga
//
LOCUS       KCPA01000043             736 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 4845tic ultra-conserved element locus
            uce-4205, sequence.
ACCESSION   KCPA01000043
VERSION     KCPA01000043.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 736)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 736)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..736
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4845tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>736
                     /note="ultra-conserved element locus uce-4205"
BASE COUNT          222 a          123 c          131 g          260 t
ORIGIN      
        1 ttctcttcag atcattgatt ccagtttgat tttgctcata catcaatttt ctctaattct
       61 aagtaaatat aagtcacatt ttttacatta tacccctcag aggacttttt tcatttcagt
      121 aagcattatt tgaatcatca ttacagtatt cataacgcgc tgcttatgtg acagtttctg
      181 aactttaata ttcttttctg tagtgtgagg gcttagcaga ctataaaaga gacatattgt
      241 ttataatgtt tctgcaccac aacaaatgat gcacttctag catctatgaa atggcagtag
      301 ttttctaaat ttgtgattct tctgtgttca gcagtcaaga acagttgtac atctgctcag
      361 cacagacttt aggagaccat gaactttaat tgaggaaaaa taatgagggt tcagggacca
      421 ctgatacaga gtcggttggt aaggcaggtg ccctgctgcc agatcaatgg attatttact
      481 cctttgtcat aaacaagaaa cagttgggtc tttgtagaga ttacattcac attccaaagc
      541 caggctgcct ttttctgttt gtaaacatgc agtatattga atgcttttgt aaataatagc
      601 tttgctcctt cattaaataa tgtaatgtta accttaatag aatttaaagg aacaatagtg
      661 ggcatattaa ttaataatct gtacttcatg tgcacagaaa ggattctgag ggtgttggag
      721 catatttata cattta
//
LOCUS       KCPA01000044             247 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 4946tic ultra-conserved element locus
            uce-6207, sequence.
ACCESSION   KCPA01000044
VERSION     KCPA01000044.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 247)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 247)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4946tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>247
                     /note="ultra-conserved element locus uce-6207"
BASE COUNT           79 a           56 c           49 g           63 t
ORIGIN      
        1 ctggactcct cgatgaacgt aacattgcac acacacacac ttggagagag agagagagag
       61 gcgctcgcag tgggcagaca gacacacgca cgcgccaggt caaagaactc tgatacagtg
      121 caagaatttt cccaaaatga ttggatcatc attaccaaaa acttgccata acaacaccaa
      181 gaaacaaaga aatgtttaag ccacactgtt tgactgggat ttttcctgct tttttttttt
      241 ttttttt
//
LOCUS       KCPA01000045             624 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 5055tic ultra-conserved element locus
            uce-1323, sequence.
ACCESSION   KCPA01000045
VERSION     KCPA01000045.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 624)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 624)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5055tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>624
                     /note="ultra-conserved element locus uce-1323"
BASE COUNT          194 a          128 c          110 g          192 t
ORIGIN      
        1 atacggacat ttgtctcttt tacatctata tctacaaata cttcgcctta cctctgatgt
       61 ttgtaattca aatgctacag actcaagaat gacaacaaaa atatgtaccc atcaaagcaa
      121 tgactttttc aaactttttg ttcagatcgg ctaagacaga tgccactttg actttcactt
      181 acaatagcac gtcaaaccag agaaacgatc agcgtttgga tcttcagaat aggaaggaaa
      241 aaacagctga gttgtttttt cctgttttag ctttattgca cagttaaaag caaggattac
      301 tgaggtcatt aagcaacatt gtctctgtga catgattagt caggtagcaa agtccatttg
      361 tcacctgcac cagcaaattg agttaatact gcactacagg ctatggggac tgtataatat
      421 caacttgatt acatcaaact ggctgcaaac ttgacacctc actgaatttg tcggcattaa
      481 tcgttaagcc tgtcacaaat ccatcaggtt tacagataat taggggcctg ttaatgaagc
      541 tggctaaaca accttacctt ttttgataat taagaagccg cttcattacg aagggaccat
      601 ttcctctgag cagtatgtct tgtt
//
LOCUS       KCPA01000046             411 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 5157tic ultra-conserved element locus
            uce-3988, sequence.
ACCESSION   KCPA01000046
VERSION     KCPA01000046.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 411)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 411)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5157tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>411
                     /note="ultra-conserved element locus uce-3988"
BASE COUNT          116 a           88 c           71 g          136 t
ORIGIN      
        1 cctgcgttgc acagtcatta aggggtctgc tgcaaaagcc tgcttgactt tcttcccact
       61 aattacatca tcagatcatc acactgctaa aatcaggcgc agagtacttg cacacaacta
      121 aatccctgct tctaattact attttagtct ctttttcctc gtgacatgtt ggtgatagat
      181 cattattttt tcagcaattt gttcgcattt atatgcaata taattggatc tgattaatta
      241 ttatgattaa tgactgcaga atttccttgc aaagctatta atactgggag tatcaaatga
      301 aagacatgga caaattaaag ccaatggagt cctgttgctt gtacttacaa tgcctgggct
      361 caagtaaccc tttgctgctc cagccctgca ataaatacca gggtttatct g
//
LOCUS       KCPA01000047             645 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 5261tic ultra-conserved element locus
            uce-1385, sequence.
ACCESSION   KCPA01000047
VERSION     KCPA01000047.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 645)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 645)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..645
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5261tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>645
                     /note="ultra-conserved element locus uce-1385"
BASE COUNT          232 a          100 c          109 g          204 t
ORIGIN      
        1 atatttgttt gattttcttt taaactgtga gtgttagcaa attttacagt tagagcaaca
       61 gtttattttt ttcaactgtg tggatataca cccaagaaaa tgaaatagac agaagtgtca
      121 cgcataggat atgccagcat tgatttatat agcataacat aatattagac tattggttta
      181 aagtgaaaga gtatttctag aacatgggct taaacatatc agtgataaat gatgatatgc
      241 attgtctaac acttgctttt atataaatag ctccagaaga ttgcttaaat gataatcgaa
      301 aatatgaaat agggtggcct tcatatcaca aggccaaggg tctacaaatg gaaaaactga
      361 aataatgaaa tatttccaag gcaacagact gtcaacaaga acagtaatgc atgggcatat
      421 catagagcta cagagaggat attagatctt atagctctag agccaggagt tataatgacc
      481 tttattaaat agaaccctcc cacattacaa caatctttct gatttctgat ttatggatta
      541 gcagtcatac tactcctcat aatttgaaac attcttcctc catatttgat ttgcactgga
      601 atcatacatt atttagagct tacatgagag tattgatcaa caaaa
//
LOCUS       KCPA01000048             756 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 5369tic ultra-conserved element locus
            uce-805, sequence.
ACCESSION   KCPA01000048
VERSION     KCPA01000048.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 756)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 756)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..756
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5369tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>756
                     /note="ultra-conserved element locus uce-805"
BASE COUNT          223 a          169 c          132 g          232 t
ORIGIN      
        1 tattggtttt gtccatgaga aattaagtac tttacttatc cataaaaagg atgcaggcca
       61 aaaaacatgt taacaccgct agcttgtaat tgatgcaatc acagtattac tatctaaatt
      121 tttgtttact tttcaacaga ttggtgtctg cagatcacgc tgtcttacac tgccattcct
      181 ctgtaacctt aaccattatt cctactgtgt aaagtgaagc acaaatttaa ggtgacaaag
      241 caccagttgg ctgatgtgaa gtatgctacg aaagcagaaa cctctgaaag cttcacagcc
      301 attatgaaat aactgaccta tatgaaactg ctaccatggt tcacaaattt attgtcaggt
      361 tccagcctct agctgttctc tgattgttct aaatacttga caaactgaag ccttttcact
      421 ttccgttgaa attgcctcat ctccctgtca gagcgccatg ggggactcca ttacttttct
      481 gacttctttc ccctactgac aagtcattta gctggcttct tgttgtgaag gctgtccatg
      541 tcaaattagc cagggcccct attgtcctta ttaccactcg aaaagccatc atgagtaatg
      601 ctacggggtc cctcagttgt catcatttgt cagaaagaaa gggagtgtgg ttacatatag
      661 ctgacaggta atttcagtgt ctacaattac cccaattagt cttgtcataa acaattcgat
      721 aaatgcacac caatacaaac agataaacac accaag
//
LOCUS       KCPA01000049             601 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 5477tic ultra-conserved element locus
            uce-3484, sequence.
ACCESSION   KCPA01000049
VERSION     KCPA01000049.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 601)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 601)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5477tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>601
                     /note="ultra-conserved element locus uce-3484"
BASE COUNT          187 a          127 c          118 g          169 t
ORIGIN      
        1 tttgcatttg tcaatatgag aatcctgcat ttcttctgat gtgttctctc tgacagaaat
       61 cttgtgtgcc tgactaatct ctgccttgct gatgctattg aatgagcttt gtgtgtgaaa
      121 actccactaa tccttgtact tactgtttga atgtttgcta caggaagcga gcagctgcaa
      181 agcatctaat agagcgctac taccaccagt taaccgaggg ctgtggaaat gaagcctgca
      241 cgaatgaatt ttgtgcttcc tgtccaactt ttctccgtat ggataacaat gcagcagcca
      301 ttaaggccct cgagctttat aagattaatg caaaactctg tgatcctcat ccctccaaga
      361 aaggaacgag ctcagcttac ctagaaaaca attccaaagg tgcccataac aattcctgca
      421 ctgacagaaa aatgaacaag aaggaaatgc aaggcccaag agatgacttt aaaggtaaga
      481 tgttctccta aaataaaaca acagaattca ctctggtgag gttctgctga ctttaggaaa
      541 atacagtatt actatggatt cagaaaaatg gaaattctga acgcttccaa atctggatct
      601 t
//
LOCUS       KCPA01000050             727 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 5588tic ultra-conserved element locus
            uce-3010, sequence.
ACCESSION   KCPA01000050
VERSION     KCPA01000050.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 727)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 727)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..727
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5588tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>727
                     /note="ultra-conserved element locus uce-3010"
BASE COUNT          235 a          121 c          122 g          249 t
ORIGIN      
        1 agtactgaat tcaatctgtt ccctttccat gctttatttc tgttgatgat ttcttataaa
       61 agtacaatga tctcagttat atgattgctc taccctttag tctcgatgca ttgtgtaaaa
      121 tataatgcag tacagatgtc aacctaagaa ctaaatagct tatatttctt aagaaccatg
      181 aaaaaatatt aacactatag aaacaatagt tcagtaatta cttttgctgt gaagtgaggt
      241 taggcattta tccttataga ttcctaatac acttaaagtc agcactgccc ctgtggtcct
      301 tttacctttg ttgataaatg tattgtacag gataccttgt atgaccacta cagtatttga
      361 ggtcatgcta ggctgttagc acaaatggtg tgaacaatag tttatatgcc acttaactcc
      421 ttgggagaaa cagttaacct tgctagagag gacagatcag tcatgtatag ttattaaagt
      481 ctagaaggtt ttgttatgct ctgaaatact tttatagaac tacaataatc tggtacgagc
      541 tttgccaagt agagaagcaa caaagtcaag aattatcttt gccacctttg aaaaggatgt
      601 attttaccag acctactttt gaaacacaaa ttctgatata tttaatcact agaatttttg
      661 aacaccaggt agctattaag tcactactaa atttacatta attgtgaatt tgatggcctt
      721 gaaatgg
//
LOCUS       KCPA01000051             595 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 5695tic ultra-conserved element locus
            uce-2566, sequence.
ACCESSION   KCPA01000051
VERSION     KCPA01000051.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 595)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 595)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5695tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>595
                     /note="ultra-conserved element locus uce-2566"
BASE COUNT          154 a          123 c          127 g          191 t
ORIGIN      
        1 ttggctaaag ccatgccaag gccttcagtg agacaggtct ggccatgcaa ggttaacttt
       61 attgtgcctc atagggattc tgtaattgat gtgtttttag tctgtgcatg agtgtcaatg
      121 caaagttaag atgctcctca ttaacctgct ctctgcatct gagggattgc ttgggcatcc
      181 tggtggatat ctttgtgctt ctgcccctag tatttctcaa cgaagagaag agctgctaat
      241 ttgtttcttg acaaatgtcc cattttcaca gacagttgaa ctgaactacg cttgtgctca
      301 attcaaacat gtcaataaac attattgcaa agatgtacaa gcaataaaaa tttcactttt
      361 ttttcttctt gccgtgaatt tacatgatgc tccaaatttt actcttccag agcaaagtct
      421 tgggattttg cttatactgt caccccagtt tcaaccaatg acctttgctg ccttctccat
      481 gagtgctggg gatgggaaca ctgcagcaga ggtacggata catgtctaaa gttgcagtca
      541 gactcagtta aaagctgaag aggtgaagtt gccattctct gggataagct gctat
//
LOCUS       KCPA01000052             376 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 5803tic ultra-conserved element locus
            uce-743, sequence.
ACCESSION   KCPA01000052
VERSION     KCPA01000052.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 376)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 376)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5803tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>376
                     /note="ultra-conserved element locus uce-743"
BASE COUNT          112 a           77 c           68 g          119 t
ORIGIN      
        1 tcttagttca ccctgtgtga aggcttatac tccctaatat taaggatgta ttatttatac
       61 cgactgtagc cacgccacag aacacacgag gagagtttgt ttagcaacaa aaaatatttg
      121 ctacaggggc agtctggcaa tattgcttgt taagacatgc tatttgtaag caaatttata
      181 tgaaaagtat gcaatgtcta atactaaact actccagccc cagactgaag ggtgatttta
      241 caaacgtcct gcagcactca atcattcctt cattttaatg tctttatttt atgattttgt
      301 tgatgaaata ctacttaccc agtgctcaaa attcctttta ggctgcaggc actggctagt
      361 tgacacggca agccat
//
LOCUS       KCPA01000053             524 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 5914tic ultra-conserved element locus
            uce-1616, sequence.
ACCESSION   KCPA01000053
VERSION     KCPA01000053.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 524)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 524)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5914tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>524
                     /note="ultra-conserved element locus uce-1616"
BASE COUNT          168 a          113 c           99 g          144 t
ORIGIN      
        1 tgactttgaa ctaaacatca attaatgcac aaattaactc caataagcaa attcattggg
       61 gctcggagca atcacttcat tttccagtgg tcacttctta attctcacga caaacaagac
      121 atcacataat gtatgctcca aagctgggac ccttcagctg cgacccatgg ccaatataag
      181 ctcatttgaa taatcaatat gacaacctta tttttctaat gcaaacagga ttgctacagt
      241 aaggtgtctc actgccacat cacagtcatg gcctctttta acccctaatt agatttaggc
      301 gattatccct gctcttcctt acaagtgtac agcctggata agggatgaca aaacctcagc
      361 ctctgcaggc tgcaggttat gcagggagat acagaagatc agcaaacaat tgttattcat
      421 gagatagtca cagtttgcca gaaaatagcc cagaggggtt acacagatgg aaattcaagg
      481 tgatgttggg gaattatgtt taattcaaat tggttatcac aaag
//
LOCUS       KCPA01000054             722 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 6022tic ultra-conserved element locus
            uce-965, sequence.
ACCESSION   KCPA01000054
VERSION     KCPA01000054.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 722)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 722)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..722
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6022tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>722
                     /note="ultra-conserved element locus uce-965"
BASE COUNT          255 a          115 c          120 g          232 t
ORIGIN      
        1 atagcgcata ttttatagaa tgattaatac gcactcatgc ttttgaatta acatatttaa
       61 gtgtacataa taaattggga attcttacaa atagataaga aggttttaac tgcattatag
      121 acaaataaga atacaataag cttgaaacaa tacatttaag aagaagaaaa acaaagatgt
      181 aaggtcagac aatatctcaa ataacatttg gaaaatgctg ccaattgttt ggataactgt
      241 acaatgccaa agcctcttat aacattgtta agtctttatt cagtaataca ttatcatgca
      301 tatttcatag cagggattac taagacagaa ttgtgtgtca tttttgttgt atgtctttat
      361 aattacacct tgaagccaca actagatttt ttttttacta catattcatg aaaagcggac
      421 ttgtaatttg ataaagggta gcttgtgttc tcaactccat tcaaacagca tcatgaagca
      481 gaattaaagt aggcatctgt gttctcccgg cattaatctc ttcaagcaca ttccagctgc
      541 tatgatgtgc aagagggaga taagtcctaa acggactaaa gctaagcaag ccagacaact
      601 ctattattgg cttcataatt gcttaattaa acttttgtca ctaatcatta tgagggcaat
      661 agagctgtta tactggcttc tgttaagcaa aaatcaataa actgttggag ttaatttcgc
      721 cg
//
LOCUS       KCPA01000055             535 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 6132tic ultra-conserved element locus
            uce-7854, sequence.
ACCESSION   KCPA01000055
VERSION     KCPA01000055.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 535)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 535)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6132tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>535
                     /note="ultra-conserved element locus uce-7854"
BASE COUNT          118 a          113 c          170 g          134 t
ORIGIN      
        1 atgccagcac agagctctgc ttggctagtg gtacttgggg caagtgtgct gcagcactag
       61 ctggggtaaa aactctatgg aagctccact atttatgggt ggagaggaca gggggatgct
      121 tgctctccca ccttccccca tgttgtctca aaagtctttg gtgcatcttt gattaggtgt
      181 aggtcaaaag aatttccaca tcgtgacctt aataactggg gttgattggc aggcagtctg
      241 cggagaggga gcagcctgtc cctttcatct cccttggtgc cgtgctggga caatgggcca
      301 gcatattttc cttgttgttc ctcatttgaa aagggtctgg tatctctact aggtacctgt
      361 gacatggggg tcttgattgg ggtctcataa agggccctgt cactgtgtcc aaaggccagg
      421 aatacaaagg cggtcagtgg gtgggggtct cagctgacca ctgaagaagg gaggggaggg
      481 tcctggaagc agtggaggga gaagcaaccc ctgatgggag accttaaagg gggga
//
LOCUS       KCPA01000056             510 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 6240tic ultra-conserved element locus
            uce-7641, sequence.
ACCESSION   KCPA01000056
VERSION     KCPA01000056.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 510)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 510)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6240tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>510
                     /note="ultra-conserved element locus uce-7641"
BASE COUNT          143 a           91 c          102 g          174 t
ORIGIN      
        1 agcttatgtt tcattaaaag attttcctta accggaccct ttcagtgttc tctggaacac
       61 acttaactaa tgaaacttaa atgaaagtgg tgttcattta attttgatta tattctctat
      121 tttgtctaaa atacattttt aattgcgcta tttctgggga gctaatgagg ggaaaaactt
      181 gtttctgaga aattgaattg cagctgtagt cgcagataag gctgacattc ccttcttaga
      241 aaaaagcaat caatgctgaa tgtatcaggt gagttcattt ctcttgctct gctttaatag
      301 cttataaaga agattgatta agttcttgtc tgatagatca ataaaggaat gaaagttagc
      361 tttccctcct tcaagcatgg gtttggcgtc tgctggggaa tgtagaaact gaagaggagt
      421 gatgctaact tggggggatt ccaccaaact cattcctctc ctattgctta cagccatggc
      481 attcaccatc cagctggatt ccttttgctg
//
LOCUS       KCPA01000057             562 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 6350tic ultra-conserved element locus
            uce-7783, sequence.
ACCESSION   KCPA01000057
VERSION     KCPA01000057.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 562)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 562)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6350tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>562
                     /note="ultra-conserved element locus uce-7783"
BASE COUNT          168 a           90 c          122 g          182 t
ORIGIN      
        1 tgggctttcg cctctcttgt agccccacag aattgttgcc tctttgatgt actctcttgg
       61 ttaagctgaa tatattgctt tcactgagaa tatatgattg cattggtgga aggcaggagt
      121 cagtaattgt gcatatgtgt gtttcttcta gtggaggcga tagtggagtt tgactacaaa
      181 gctcaacacg atgatgagct gacaatcact gtaggtgaca taatcaccaa tatcaagaaa
      241 gatgatggag gctggtggga aggacagctc aaaggcagaa gaggtttgtt ccctgacaac
      301 tttgtaagag tgagtacaaa gtggaactgt tcttgtgttg tgtgcctcat gtactgtgct
      361 gttcaggcta atatctccta tatccaaaac cataatatat tgcatataca cgtgtgtata
      421 cacatatatt gcatgtatat atacataatg caatgtttta tcaatgttat aaagtttgca
      481 aagacaaact aaaaataaaa atttctctgc tgttttgtga aaatatttga ctttgtggtc
      541 taagaacgtt attctagaac aa
//
LOCUS       KCPA01000058             594 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 6460tic ultra-conserved element locus
            uce-7583, sequence.
ACCESSION   KCPA01000058
VERSION     KCPA01000058.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 594)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 594)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6460tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>594
                     /note="ultra-conserved element locus uce-7583"
BASE COUNT          169 a          134 c           97 g          194 t
ORIGIN      
        1 ggcaaaccta ccagagtttt taagctctct ccaccaccca cagcaaggtg aactgctgtg
       61 ttcccatcaa tttccaagat ctatttccca ggagcctagt tactataatc atgtcccctg
      121 ggagcaaatt taccctggta tgcatttgct cagcctctca ctatcacaca tacaattaag
      181 ttcagctttt aaaatgtaat tggagccagc tgcaaccttt ctgacacata ctaattgcca
      241 gtaatgattt aagtgcagtc aattcacatg ctgcaattgt tttaaataaa ggaatctctc
      301 gtaccttttc cctgagaaaa atctgttaat ctttgctgct gacttatcaa atcctccagt
      361 cacctgtttg ccatcatttt catgagctga taacgtgttt attagagcca taatatgcag
      421 gtggaagcat aaaggtctca tttggtggag tatgaattct gtctcataca tctgtatgga
      481 aaagcttggt ttcacccttc agctgtgcct cagaagctcc aaaatagtat attttattct
      541 ttcaaatgaa atattagttc ttttaagctc atatctcaaa acaccatttg gatg
//
LOCUS       KCPA01000059             588 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 6562tic ultra-conserved element locus
            uce-7878, sequence.
ACCESSION   KCPA01000059
VERSION     KCPA01000059.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 588)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 588)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..588
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6562tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>588
                     /note="ultra-conserved element locus uce-7878"
BASE COUNT          173 a           90 c          115 g          210 t
ORIGIN      
        1 gttccgtgaa tgttccttgc ctgttatgat gacccacatg ttgatttaag aatggataat
       61 tatattcatc tttggaaatc aagtgctctg tgacagcgtg agtaatagct ttcactcgga
      121 agaggacgtt gaaggatccc tgtgatggaa aataatatgg tatatatagt aaaggtgatg
      181 gagcgtttgt cagagttatc agtcaaaaga ttgccttaaa gcaaagactt gttttaccat
      241 tgttgatgct gaaagaagaa ctagacttaa aagtttgtag atagtcataa gtcgtgagtt
      301 ccttaacaag attttccaga ccatttgaca tatttatact gctgtctatt tttgccaatt
      361 gtgtggcctt agctgtttac atcccattcc cagaagatga ttctaattca actaatcata
      421 atttggtaag tactctgttt gtttgctatg atttgagact gcactaaata taggtaactt
      481 cagttatatg gagttgccca tcttaagttt tatcagtaaa actttggtga gaactgtgaa
      541 ttaatattat gctttccatt gcttatattg attacacatc tttactag
//
LOCUS       KCPA01000060             476 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 6671tic ultra-conserved element locus
            uce-849, sequence.
ACCESSION   KCPA01000060
VERSION     KCPA01000060.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 476)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 476)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6671tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>476
                     /note="ultra-conserved element locus uce-849"
BASE COUNT          146 a           89 c          100 g          141 t
ORIGIN      
        1 aattattaga aaattcaaaa gtctctcacg aacaccacca ccatgttctg tccagaagaa
       61 aaatccctca gccgcaatgg ttgtttttat taaattctcc tcaataaaaa gctcaggcag
      121 gatttattag gtactcaggg cggacgttta gtatttcgcc agttattaag tgaaaatcaa
      181 tagaaagcaa agaaaatgga agtcactgca ctgttagcac gctgttgtcg cccagatatt
      241 atgtcggctg tcttgtagat tcatgacaga cgaaagcggc cgggagagaa ctctttctgc
      301 ttacattgca ggagccaaag tggggttatt cattagatca ggcagctggc cagatggatt
      361 tccagttcag ttttaccatt tatcttaaaa acgcctgtat cgagtgagaa agaacactga
      421 tattatgtga tatcgatggc agctttatgt atctaaatca ggatttattg ttattt
//
LOCUS       KCPA01000061             505 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 6784tic ultra-conserved element locus
            uce-3929, sequence.
ACCESSION   KCPA01000061
VERSION     KCPA01000061.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 505)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 505)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6784tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>505
                     /note="ultra-conserved element locus uce-3929"
BASE COUNT          142 a          102 c          107 g          154 t
ORIGIN      
        1 cctctgccat ggacccagct tttattgctt gggtttatta gcgccaaatc ccaggctcca
       61 cccagtttgt gggcactgtg ctcattcttt ggaaccaaga gaggttatca cctaccttaa
      121 tccgtgcagc ggggtggatt aaggacacca atgtgcctcg ggattctcaa agaggatcct
      181 ggaaacttct tgtttcttct tttttgctgt ctttactaaa ctctattggg cctcagtaag
      241 gatttgcatc tgaaatgggc aacctggagc ttttctcaat gaagacatca gatcaaagtt
      301 cagttagtca aggcctttct aaaacattaa gggggcttgg aagtacacaa taaaaagatg
      361 agctctggca gagattgcag taaaaacatt ctgatctgta atccggataa agaatagatt
      421 ataggccaaa gaacagcccc tgtttaaatt gctttcagaa tccttgtttt gagtaaagtt
      481 acattttaaa ttttgataga atcta
//
LOCUS       KCPA01000062             714 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 6897tic ultra-conserved element locus
            uce-6242, sequence.
ACCESSION   KCPA01000062
VERSION     KCPA01000062.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 714)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 714)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..714
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6897tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>714
                     /note="ultra-conserved element locus uce-6242"
BASE COUNT          180 a          181 c          217 g          136 t
ORIGIN      
        1 ttgatcagct tcggtgatat gctgctgtct gagaccctca tctccatgca ggaacaactt
       61 agcttcaggt tcacagaggg ggagagtaat tatagacctt tgggaccagc catcatccac
      121 agatgctggg gcaggcagct gccttgcctg ggctgccctc gcgcggggcc agagcgagtg
      181 gctcgccgcg actgctgtgt gaagcgaggg tttctgcttt tccttaattc tggcctctct
      241 ttatctttgc tgttttcagt tcaagatggc tttcccatgc ccaggcgctt ttctaaaccc
      301 gaataccaac aattcttttt agggatgcac aaaaagtctc tggaggcagc ggctgaggcg
      361 gggaggaaga cagaggtgga gcgccaggcc ctgcccaagc ttgacaaagg tgacaaagaa
      421 gaaaggggtc ctgatcccaa aaccaccatt tcccaggagg aactgagaga aaacagcatt
      481 gctgccctca gggccaaagc tcaggagcac agcaccaaag tcctgggaac cattgccggg
      541 gacaccccag ccccaggcag gaagctggag acaggggagg aggcgccagt ggcagaggat
      601 gagagacaga cggagaagtt gaactcatca cagaaggagg agaagttgat ctagggggaa
      661 gagaggcggc agaagccagc cacaacagac actgtgtcct ctgggggcca cgtt
//
LOCUS       KCPA01000063             636 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 7004tic ultra-conserved element locus
            uce-6363, sequence.
ACCESSION   KCPA01000063
VERSION     KCPA01000063.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 636)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 636)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7004tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>636
                     /note="ultra-conserved element locus uce-6363"
BASE COUNT          168 a          134 c          124 g          210 t
ORIGIN      
        1 agaggttaat gtgctgaaat aaacagagta tgaaaataaa actttctaca ccagctgtca
       61 aattcagcta tcttgaattg ttttgggctg gtctttgcat tttgatgcta attaagatta
      121 aatatctctc actactgaat tttgtagatc aagttgaagt acttccctaa tgtcatgtaa
      181 ttttctggca ttaatgcact ttatcattgt cataagtata aatggctcat taaaatcagg
      241 agggaataca atacttttat ggatttctgc tctcatgtta atgctgtttt ctttcctcat
      301 gagtaatctc ttgatggctt ctgtctccac agaacagaga caactacatc cgttcctgca
      361 gattgctccc tgacggccgc accctgattg ttggtgggga agccagcacg ttatccattt
      421 gggacctggc agctccaact cctcgcatca aagcagagct gacatcttct gctccagctt
      481 gctatgccct agctatcagc cctgattcca aggtctgctt ctcttgctgt agcgatggca
      541 acattgcagt gtgggatctg cataaccaga ctttagtaag gtaggtcgac caaactggat
      601 catcaggtta tgaagaatta tattttattt tcttta
//
LOCUS       KCPA01000064             666 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 7116tic ultra-conserved element locus
            uce-978, sequence.
ACCESSION   KCPA01000064
VERSION     KCPA01000064.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 666)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 666)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7116tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>666
                     /note="ultra-conserved element locus uce-978"
BASE COUNT          180 a          115 c          156 g          215 t
ORIGIN      
        1 tgccgagtct gtgttaaggc ttgtcagtct ttaataaatc ttgaagattt aagatgctgc
       61 tcctcgctgg tgcccatcac tccccagtgc aaggcagggc agagccaggg ctgcagggac
      121 gtgtgagaaa agagctcctg gaaaggtcat tggtattttt ggagcaataa atcacgggaa
      181 agatttgcat tttggctgta taaaatccag ggctggattt ttgcagtaat atttctctcc
      241 tgacttgttt tattagcttc ctttaaacat gttacattat tgcttataga atttcattta
      301 cttggattgg cagcttgata aatatgtcta ttggcgatga tttggattgc tctgggcatt
      361 aatattatta aaacctgtca caaggaaatg tctgaaagat gacttactgt aaagattaca
      421 gcatgaaata aatcatacaa tggtatttgt taccgtttat ggcctcttgg agccgagtca
      481 atcccttttt atgttgcatt atttttcaag tttttatagc cttacattat atatcgctgt
      541 cagaaatgaa cagatggggt gtcaaacacg agccttctga ataattccca ccctcgggtt
      601 atttgtatga aggacaagtg taaagctgtg ttcccgagga aggcggcggg atggaggtgc
      661 aggaag
//
LOCUS       KCPA01000065             811 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 7227tic ultra-conserved element locus
            uce-4679, sequence.
ACCESSION   KCPA01000065
VERSION     KCPA01000065.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 811)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 811)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..811
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7227tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>811
                     /note="ultra-conserved element locus uce-4679"
BASE COUNT          252 a          171 c          131 g          257 t
ORIGIN      
        1 catttaaaag gagccacaaa tatttatgag gcaattttaa cacttaccaa ttacttttgt
       61 ggggtttggt actttaatag ctgtagttgt atcaaccttg gctgatactt cctaattatt
      121 catatcctga cgtgttatca accatcatag agcattacca gcatcatttt aagctctctt
      181 caccttcttc agtctgggtt ttatttgaaa aacagacatg cagtccccag tgagaattaa
      241 agtagaagca ttagcttgca aaatatatgc caatgaccta atgattctga catttccaca
      301 atacaagctt tacaagaagg catgcagaca gcaaagtctg tttttctatc tcatattttt
      361 ttaatggcta aatgtttgga ggaaacaaaa tggatttatt ctgctcaatc cagggtataa
      421 tatcaggact tatccggttc cgggccccag ggcttcagac aactaacaaa acacatctta
      481 cttctgctct gctagctctc tgttatgctt ttcacacgca ggaagaaaga gtaaaagcat
      541 aacccaattg aataaagcag catggcctgc tattctttgc ttatgaggca tcacatgata
      601 gacaccaaat taagaagaac cccccacctg tggttaagta tgtatgcaac tgtcaagccg
      661 ttttatctaa tagggaattt taccattccc tccaccacca gagtacaata tgttaaaatg
      721 ttaatgccaa gcatgcttta ataatccagt gattttacat aatttaaatc tctgatccat
      781 tttgaaatgc tcctaccttt caaatccttt g
//
LOCUS       KCPA01000066             592 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 7335tic ultra-conserved element locus
            uce-6842, sequence.
ACCESSION   KCPA01000066
VERSION     KCPA01000066.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 592)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 592)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..592
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7335tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>592
                     /note="ultra-conserved element locus uce-6842"
BASE COUNT          176 a          102 c          102 g          212 t
ORIGIN      
        1 aagacattta tttcaggcaa agaatgttat ctatttccta ctatacatta atatacattt
       61 agatctatct atcctgctag ctatagctat atctaaccac aataaaacag ttgagctctc
      121 tcaagcgtta tgcctttaag ttaaacttta ttgaaataaa ataaggaaag aacaatacat
      181 tttgcattct tcagaagcca gtgttcaata aatactaagt tttgatcgat tgatacagtg
      241 tcatatttga ctaaagaggt gggaaagttg ctactgttgc tttgtgctgg ctagaagaag
      301 aatgcactat tgattttata tgttggatgg gctgtcaacg tacagtgcat tgttgatttt
      361 gacttttata gccaacatgt ttcctttaat tggatcattt gtaaaagaga ggagggtacc
      421 tgttcccttc tgacagtgac tgattacaat catttcatgt ttgtcaatat ttgataaacc
      481 cacagttacc caacaacatg gctgaaagca gcatctttat gcatttgctt gtttcccctc
      541 tttcctgttt ctgatttcag tctcagtgaa gttgtgccag aaacttttat tt
//
LOCUS       KCPA01000067             645 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 7448tic ultra-conserved element locus
            uce-4963, sequence.
ACCESSION   KCPA01000067
VERSION     KCPA01000067.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 645)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 645)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..645
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7448tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>645
                     /note="ultra-conserved element locus uce-4963"
BASE COUNT          215 a          107 c          120 g          203 t
ORIGIN      
        1 cagtatgtga tgctgtgaac atacattatg ttcttcttct tccttaagga ggatacttag
       61 gtgaagggga agtttttcag atctaaccct tgttatttta cctgttctca ccaggtaatt
      121 tccagttatt cacaagtttc cctttagcct taataagcct tcagtttcgt gaagaagatt
      181 aagactgtat taagattaag tctgaaatgt tctgctacca attagccctc tagtatttct
      241 gtaagccttg aatttttgat gcgatcaatg acaccaagtg gagccatctt ctgtggagtg
      301 gttattaaag atataaaaat caatacaaag atgatacttg gaaatctata tcacaagata
      361 atgaatcatc atgagagaca gctaagaagg aatgtcagca aaccaaacag aaggtttgtg
      421 cataacaaat tatttgatgg cagtagagtt taagctaaat tttgcatgag acagaagtct
      481 tcaggcaaca cttatgatac atttgcatgg caaggtttta atgagatgaa gacgcaagac
      541 caactatgca caggtctttt tgtgcattaa gggatgaaga caataatgct ataacttgac
      601 tttaatgaca aaacagcatc aaaaactttc tctaatcctt attaa
//
LOCUS       KCPA01000068             540 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 7557tic ultra-conserved element locus
            uce-2651, sequence.
ACCESSION   KCPA01000068
VERSION     KCPA01000068.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 540)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 540)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7557tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>540
                     /note="ultra-conserved element locus uce-2651"
BASE COUNT          141 a          135 c          141 g          123 t
ORIGIN      
        1 gtcgtagaac actgatctag gtggaaaatg aaccaaccca caaaagtcac taaaaataaa
       61 cgtctgtcaa aactgtctga gagttacggt tagtttgctt ttttgccatg gtaacatatt
      121 atgcttcaag taccagttca aagatgtcgc gtttggtcag atgaagttgt tacatcattc
      181 accacatacg acaacaaaaa tgcttgcccc tagcacattt cacagcttca cccgctacag
      241 actgtcactg aaaacaatgc ggtcagtctg aaccatgtca agtaaactac agaagtagca
      301 tacaaaccgt gctagctcta accccaaaac caggttcaac ccccactcgg ccccgtggca
      361 gggggtgggt ggtggcggtg ggacaggtgg gaggtgcggt tgtacagtac attctcaggc
      421 gggctcctgg cacgcaggcc ggtcctgcag cattagcgac agcgcagctc agtaccggtg
      481 ggtctggtgc gagtactgcg gcggctgctg ggaggtagct gagtatccca tgctgctctg
//
LOCUS       KCPA01000069             430 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 7669tic ultra-conserved element locus
            uce-185, sequence.
ACCESSION   KCPA01000069
VERSION     KCPA01000069.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 430)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 430)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7669tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>430
                     /note="ultra-conserved element locus uce-185"
BASE COUNT          146 a           57 c          106 g          121 t
ORIGIN      
        1 agagaaaagg agggggtgta gaagggctag agatgagaaa agagaggctt aaatagaacg
       61 gtatacacta agtagtatag ccagcaaaat tgaagtcatt tactggaacg cttttaattt
      121 ggtttaaaca aaatactctt ttgtatattc aaaagtagct cagctgttgt gaagccagaa
      181 aattaatggt atttttagtg aaatagcaaa cgcatgtcaa caacatagca gtggatgata
      241 atgttggcat tttattcatg aggaattatc aatgcaggtt actggacagc atagtgtgac
      301 tggaatgatt gagcacaggg gagaagtggc tgtccttctg taagacaatt tcattttaca
      361 tttagtcctt caggaagaga aggagacaga aagaacaaca tgtctgtacc tatccttgtg
      421 gtttctgggt
//
LOCUS       KCPA01000070             530 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 7775tic ultra-conserved element locus
            uce-3349, sequence.
ACCESSION   KCPA01000070
VERSION     KCPA01000070.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 530)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 530)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7775tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>530
                     /note="ultra-conserved element locus uce-3349"
BASE COUNT          181 a           74 c          140 g          135 t
ORIGIN      
        1 gccttgggaa acaaaaggtt ttaatggctg gtgcttggta tccttgacaa caatccccaa
       61 agaatattac attagggcac cagagaactt ttaaaaataa gtaatggaat tccgtctctg
      121 ttatgctttt agtagtcatt tcggccatgg tgcagcgagg tcataagctg agctcagtga
      181 agggagccag aacacgaaat gatgctggtc tgggagatga gaggtacaga attacaagcg
      241 aaagtgcagg cctgctgagg caattacagc ttaatggggt catttggaag gcaattgcca
      301 ggggttaatg tagtatggag agatgaggtg agattgaagt gaaatttggg gctggaaatg
      361 tgttaagatg aaagatcaga gtgcagcaga ttctgcagtg cagaaggttt atatcatgca
      421 aaaaatttga gaaaaatgta aaagtagtag ccagatgttt caaaataaat aaataaatta
      481 agtaaatgct ttaaaaagtg aaatagctgc atcaaaacac cctgtgctgg
//
LOCUS       KCPA01000071             684 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 7884tic ultra-conserved element locus
            uce-6448, sequence.
ACCESSION   KCPA01000071
VERSION     KCPA01000071.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 684)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 684)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7884tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>684
                     /note="ultra-conserved element locus uce-6448"
BASE COUNT          200 a           99 c          154 g          231 t
ORIGIN      
        1 ttttattcca cattaggagt gtggaaataa tagaattctt gtggtgctta tactgtgcgg
       61 caatgcttgc ttataaacat caaattttag ggaaagtacc tggacatgtt gggctggaaa
      121 ttgtggagaa ggggtgttgg ggtgtggata atccatgatc tggtgtattt ggtgacagtt
      181 tcatgatgat ttggtgctgc ttgtccctcc cccacccatg acaaaccttt tcccagttgg
      241 ggctggagga aatgagtaat gcttaaccca tttgtgtgat caattcactt aagcagctac
      301 tgtgaaatgt taatcacaac tttaatttgt actgcattag cattttgatt aacttgtagg
      361 cttgctagca cacttgaagc acttttactc atagttacag ctcggaaatg actttttgat
      421 taattaagtt tgttagacag cagctgagct tcctgaatgc taaccttaag gggctaaaag
      481 ttcaaaagtt actgggaata actgttgctg ttgaaaagga ttcatgtgaa caaaatatta
      541 cattcttgtt tgaaactgac tctaaacagt aaagaggaca gatttattat gagaaagatt
      601 tttggtagat ttgtgtaata tttcaaacaa atgctggttt aagacattgt ttatgttagg
      661 aaattgggat ttattgcaaa gaga
//
LOCUS       KCPA01000072             539 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 7992tic ultra-conserved element locus
            uce-4786, sequence.
ACCESSION   KCPA01000072
VERSION     KCPA01000072.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 539)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 539)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7992tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>539
                     /note="ultra-conserved element locus uce-4786"
BASE COUNT          137 a          125 c          125 g          152 t
ORIGIN      
        1 atttaatgga gaggaatcca gccacggttt aagattgtgt tttccatagg ctgttcccat
       61 gccgtattgc tgtgtgattt gaccactaga gagcaggctt aacctagtaa caagagctaa
      121 ttagttcttc atttgcagcc cccaaccccc ttccaccttt ccgtctaggc agaggcgact
      181 tccatggttc ttagctttgc ctcctgtgca atcttagggc taattaaaac accacagacg
      241 gcctgaaccc cacattaaaa tttgatgagg aattgatcag ccaagcaaac aggaaattta
      301 gctgtgtgag tgaaggtaat gtttgctcaa atgtgtaatg aggtccatgg ggaatattta
      361 tggggacctt agtgatggtt tcagcagttc cctctccttg aagtcctctg acctacctgc
      421 cctcaccttc atagcagcgt aggcccaagg aaaccccaag ctgtatcagt gagcatgttt
      481 tggaaagtct ggctaaggtg gtaaagcttt ggctgtggaa cagcattcgc aattttgcc
//
LOCUS       KCPA01000073             457 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 8096tic ultra-conserved element locus
            uce-7531, sequence.
ACCESSION   KCPA01000073
VERSION     KCPA01000073.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 457)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 457)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..457
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8096tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>457
                     /note="ultra-conserved element locus uce-7531"
BASE COUNT          125 a           93 c           92 g          147 t
ORIGIN      
        1 aaatgtgctt tgaaaaaaca agaaaatgtg cccatgaaaa acaccggcgt tcaaagctga
       61 atattgagca tacagttgta aactcacatg gcacatggcc gggtaggttt ttttggcaga
      121 gccagagtct caacctgcag tgatgctaaa gatattagca aattagcact gcaaagcttg
      181 ccagcgtatt cgctagagtc ctgctcatgc tctcactgct gtaattaaaa ctaattattt
      241 tctaaaacat agtaatacat gaatatgtgc aataatcatt ttgtagtggg caatctgtga
      301 agtattttta aagcttcttt tccccctcct atctttggct tgctgtgcag tgtgcctgct
      361 gcctggtgca agccagcact gtcattttgc gagagccacg ctactctggt aactttgctg
      421 attcttacgt ttaggatata tatttttatt gtctttc
//
LOCUS       KCPA01000074             605 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 8205tic ultra-conserved element locus
            uce-6791, sequence.
ACCESSION   KCPA01000074
VERSION     KCPA01000074.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 605)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 605)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..605
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8205tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>605
                     /note="ultra-conserved element locus uce-6791"
BASE COUNT          171 a          134 c          136 g          164 t
ORIGIN      
        1 tatatacaca aacacacata tgtatgccac atacgttggt acttttcctt tttttggtgg
       61 aagccagtgg aacgatgaca atctggatcg ccgtgtttcg cttccaaacc gaagctctca
      121 gttaacacac cggcctggta ggccagcaga tgccgtctaa gcctttaaat cgcacactaa
      181 ttgcactaat tgagctaaca gtctctgttt cgtctcccta ccctgagtca accagcatct
      241 tctggtactg ctgtagagat ccaagctgtt gactgtagtg ttattttgtc agccattaaa
      301 cgattcatca gagtcattaa ttgatttatt accgctgcct gcgagtatag ctttgcaaat
      361 aaagaaggat ggaggtcagg aggcaatgga aatcggacaa aacagcacag ccaggagctg
      421 ggcacttgaa ttatcgatag gagcccactt gcacagctgg catcaggtta tcagaaagga
      481 aaagatgtgc tgtctggctg tgctacaaag ctggttaatc tatgcaggat gtaaaaccat
      541 cttgttttct taacctaatc ctccaggaga aagcaggtta gtattaactg tgctgaagag
      601 cagca
//
LOCUS       KCPA01000075             623 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 8316tic ultra-conserved element locus
            uce-3630, sequence.
ACCESSION   KCPA01000075
VERSION     KCPA01000075.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 623)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 623)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..623
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8316tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>623
                     /note="ultra-conserved element locus uce-3630"
BASE COUNT          193 a          116 c          139 g          175 t
ORIGIN      
        1 agggtagctg gaggtaaata aaaggaatat tctgggagac ttttttgtta gacgatctcc
       61 tcagctcctc acctcagctc caggcagagg ctgcacatct ggttctagca gagaagggat
      121 atgctgcact agcttgctgc tgagtgaagg gctatgtctg cactgccatg tctgtactgt
      181 gtgctcactg ttgaactgga tatcatggaa agacttttct tcccatgttc cttaattgta
      241 gtcacatgtg gccaagctaa acccctgcag tgcaactgtt ttttcctatt tacacatgtt
      301 actaagaaac atcagctaag gatatgttat tacaagtttg tgaatgaccc cattcttggc
      361 acagggccaa gccaaacatt ttcgttcata taaaaaagca aaatgtgata gagtcattat
      421 gattgacaag cagaggtgga gtgctactat gaaacagaga gacaggaaat tccaataatc
      481 caaattaata agcatagtca ttaattccat cagtgggatt ataaaacagg aatgtcattc
      541 tttgttagga gcagtttggc caggagagga cacaggagac aaactgtaag ataccttgat
      601 atgataaaat gttaacattg aga
//
LOCUS       KCPA01000076             759 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 8420tic ultra-conserved element locus
            uce-6007, sequence.
ACCESSION   KCPA01000076
VERSION     KCPA01000076.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 759)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 759)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..759
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8420tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>759
                     /note="ultra-conserved element locus uce-6007"
BASE COUNT          239 a          132 c          150 g          238 t
ORIGIN      
        1 atgatcagag aagcagacat tgatggggat gggcaagtca actatgaagg tttgactcaa
       61 aaccattatt caggaaagcc tgttgcatag ggcattagtt aaattgagac actagtttgc
      121 ttgtccactt catggcaact gtgtacgctg gagacagtaa atcacagtga ctttttgtct
      181 tttcagaatt cgtacagatg atgactgcaa agtgaagaga cctcctttac accttttttc
      241 ctctagaaga atcaaattga atcttttact tacctcttgc aatgttcatt tattcattct
      301 gtttctgtat agcaaaactg aatgtcaaat taccttctgt ccacaaactg catgtaatgg
      361 ttggtggtcc tgtccctaaa agataaagtt aaacatcagt tttacaatat aaataattgt
      421 actaccttga aaataaaaaa aaaggaagca cttagtgaac tcgaaagttc catttgctaa
      481 tgactattac actgtttggg ctggccagtt tttcatgcat gcagcttgac aattgagcac
      541 agtcagacgt gtattaaaag gaacctagag gatccactct cttgttcaat agtggattct
      601 agttcaattt gtagtataaa ttgtcatagc tggtttactt taaaattggt ttatacctca
      661 ggatggtatg cagcaaaatg gttgaaggat gcaaaacaaa atgccctaaa ggttgaatgg
      721 ttctcctgta cgtagcagtg tgctccaaaa ataggatga
//
LOCUS       KCPA01000077             423 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 8518tic ultra-conserved element locus
            uce-2491, sequence.
ACCESSION   KCPA01000077
VERSION     KCPA01000077.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 423)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 423)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8518tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>423
                     /note="ultra-conserved element locus uce-2491"
BASE COUNT          105 a          110 c          110 g           98 t
ORIGIN      
        1 atttccagca gagctgctgg tggtgctgta cccccttagc accatttaaa tgtccaattg
       61 cactcattca gcccctgctg ctcctccagc ccgtgacagc tttgacagcc agactcctta
      121 attccttttt cttattccct taatctgtca tctttatcag gctggggaag tgccaggcag
      181 caagcaggag ccccggcccc gatcaatctc cacattacag ctgacagaat ggtgctaata
      241 acttattgat ctcatgtttg ccaagcccca gtggggctga aaggctccca ttgattggct
      301 tgagggaagg agcctctcag ctgagagcag agcggaaaac cttcaaattg tcttcttccc
      361 caggagctgg gaaagggagg gagaagggag ggcagggacc aggacaatgg aaaggaagaa
      421 gga
//
LOCUS       KCPA01000078             709 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 8628tic ultra-conserved element locus
            uce-760, sequence.
ACCESSION   KCPA01000078
VERSION     KCPA01000078.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 709)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 709)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8628tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>709
                     /note="ultra-conserved element locus uce-760"
BASE COUNT          235 a          109 c          104 g          261 t
ORIGIN      
        1 aaaaatcaaa accttaatat gtataattaa attaatcatc ataaattact ttttagcaca
       61 gagagttaga tttataatat cattttcaaa tctctatgtg aggtttaaat attttatagc
      121 atatgtgagt tagagggaaa tgtgtctaat ggcttaaata tcactgtaca gcagcagact
      181 ttgacaaaaa ctgtagcaca actgtttcta aggtagtttg taaaaattat ttatttccat
      241 accagttaat tatgatggga gtctttgttg aatgcacaag cattaaaaaa gtgctgatat
      301 tttatgcatc tttaactgta acgtgcttcc ctgcagcgca ttggtaactc cttgacattt
      361 aacattcact cacagcaact ataataaggg gtttgattgc ttcttttgca gatgcagtaa
      421 tttaataact gtgatcagtt gcataaattt actatacaac catcttaagt tagccacatt
      481 aaaattaagc aaaattgtaa tctgttgaca gattattgct cctgaacaat tctactaaaa
      541 gcatttcaga ttagcttgca ccacaagcat ttttgtttta taagcttgta aaaaatactg
      601 ctgctttttt gcttccaatc ttactattag acaattacat gaaattttat gttttctgtt
      661 aaatcacctg aactgggatg atttagttat ttataccgca ttatgtttt
//
LOCUS       KCPA01000079             574 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 8736tic ultra-conserved element locus
            uce-6947, sequence.
ACCESSION   KCPA01000079
VERSION     KCPA01000079.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 574)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 574)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..574
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8736tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>574
                     /note="ultra-conserved element locus uce-6947"
BASE COUNT          228 a           79 c          108 g          159 t
ORIGIN      
        1 ctgtataaac aagtataaat gtttaaaaag taaagaatac taatcaagag atggaagaca
       61 tgcactgctt aataaatctt gccttcaatt tatttgtcta gtattacaaa ggcagaggag
      121 atatcaatta atataggcaa agaggagcca taatttataa ttaactggca agtggtttgt
      181 aacaaacagc agcactgaat ctaatagcca gtagaaaaat aactggtgtt gatttgtccc
      241 tcggcaaatt aatagagtgc ttatcaatga cagggttaca taaaactgct aaataaataa
      301 tcatcagtga gttagagtga agcagatctt taacaagctt aatctgaacc tcttgacatc
      361 tgcagactat gaagagatta aatgctaaga aagagaagat gcactatgca catcataagc
      421 atgctcagga gctgggcaac atcatgttct tgggtaatgg gaaacaagga aacattttta
      481 ttgcaaaatt acactgaaaa atgattttaa ttttaattag actgaaaatt ataaaaggta
      541 tatcaaagaa aggctgaatt ggaattaacc agat
//
LOCUS       KCPA01000080             612 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 8843tic ultra-conserved element locus
            uce-3530, sequence.
ACCESSION   KCPA01000080
VERSION     KCPA01000080.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 612)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 612)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8843tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>612
                     /note="ultra-conserved element locus uce-3530"
BASE COUNT          164 a          128 c          133 g          187 t
ORIGIN      
        1 aataccacaa ctttaaatct atttttcttt agttttttct tgatactgtt ggcatatttt
       61 aaacctagca tagtagctaa aattggggat gatgttcttt gagaagttct cttgtatctg
      121 acaatctttt gcaatgtgag gaatggtaga agttaaaccc ttaaaattgt attacagccc
      181 tgagcatttt tcttgcagag taacagctat ccaccaatgt cagacccata tatgcctagc
      241 tattatgctc catccattgg atttccatac tctttaggtg aagcagcatg gtcaactgca
      301 ggtgaccctc caatgccata tttgaccact tatggacaga tgagcaatgg tgaacaccat
      361 tacatacctg atggtgtatt tagtcaaccc ggggcattag gaaatacccc tccatttctt
      421 gggcagcatg gatttaattt ttttcctggg aatgcagact tctctacgtg ggggacaagt
      481 ggatctcagg gacaatcaac gcaaagctct gcttacagca gcagctatgg ctatccacct
      541 agttctcttg ggagagccat agcagatgga caggctggat ttggcagtga tacgctgagc
      601 aaggtgcctg gg
//
LOCUS       KCPA01000081             443 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 8950tic ultra-conserved element locus
            uce-6641, sequence.
ACCESSION   KCPA01000081
VERSION     KCPA01000081.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 443)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 443)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8950tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>443
                     /note="ultra-conserved element locus uce-6641"
BASE COUNT          107 a          110 c           98 g          128 t
ORIGIN      
        1 tgcttatttc attgtctcct tagtatgatt tgaagctggt tttcgctccc tgcctgtgcc
       61 cctgccatgc agcagcattc cctgcataca aaggaaggtt ccaggcaagg ggggaacacc
      121 cagcccggga agctgcgacg aagccccaga cctgtgtaaa gctccattta cccaagaatc
      181 ccaaagcttt tagtttagga gaatatttaa tactcttatt aatcattttt aatccgtttg
      241 cttttaatta agaaacagca tgatgcttcc ctatcaacat atgccaggga gcagattaat
      301 tgtggcttaa gataactctc cttgattggt gtaatgtatt agctaacgag ctgcctgctt
      361 ttggagagct caggctctac cttggaaagg ctgctgccct cccccccctt ccctggggtg
      421 ctggggactt taaaaacggc atg
//
LOCUS       KCPA01000082             721 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 9059tic ultra-conserved element locus
            uce-6532, sequence.
ACCESSION   KCPA01000082
VERSION     KCPA01000082.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 721)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 721)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9059tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>721
                     /note="ultra-conserved element locus uce-6532"
BASE COUNT          233 a          105 c          142 g          241 t
ORIGIN      
        1 aattctgtaa atttcattat ggaaaattta taagatgatt tccatgacaa ccatataata
       61 agattcatgt ttactttaat tctgagttct caatgtcttt ttaatgactc ccatgtaatt
      121 aaaacagaat gcataatttg aggtaacaca atataaatca gttttgtttg cgtgatgctg
      181 aatactgtta atacatggac aatgaactgt ttaagagcct tacatgggta tgtccatttg
      241 ttgcagaact gtgagaaact ggaaaataat tttgatgaca tcaagcacac gactcttagt
      301 gagcgaggag cacttcgaga agcaatgagg taagtctggg tcaccatagc aacagtcaca
      361 gatgtggtaa agaaagagtc attcttcatt attgggggaa caaatgagtt cattgccacc
      421 attcagctct attctctaag gtattaattt gtcagtggag aggcttccct tgaggctgta
      481 ctttggtttt gaagctgcat aaatgttaag cctgactgca cagtaaaaaa tgtaaatgtt
      541 taatttgtta tttaaaatgc ttaaggggtg ccttgcttta tgtttatact aaactgtgag
      601 tgaatgaaaa tattgttcat ctaaattctg taagtgctaa agcagttgaa agatggtgtt
      661 tgaacaaacc tgtatttgct ttaaattgaa tttgaatgta tgcagttcca tcaccaaaat
      721 g
//
LOCUS       KCPA01000083             650 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 9167tic ultra-conserved element locus
            uce-7117, sequence.
ACCESSION   KCPA01000083
VERSION     KCPA01000083.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 650)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 650)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..650
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9167tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>650
                     /note="ultra-conserved element locus uce-7117"
BASE COUNT          182 a          145 c          116 g          207 t
ORIGIN      
        1 catttcatcc tcctttaggt ttaattaaga attcctcagt tacaactctc tagttgtcaa
       61 ggtctgagag actcttggaa aacttgtgtt tcagtcttgc tggcccaagc ataataaaaa
      121 aagataccca gcctgaatcg aatttttatg ctcagttcac ggtagatttc actccattct
      181 catgtaaaca gcttctacga atcaacatat gtgtctgggt ggtatctctc actttgtttt
      241 gtaacaaaaa gccatattgc atcatttaat ttgctcaagt catgcaaata ggaaaaaatc
      301 aataggacaa aaaggggtcg acttatcctc ctccccacta aactgctgcc cacacacaga
      361 gtcctgttgc ttatggcaaa agaataacaa caacaccatt gtgtttgtta gttggttcac
      421 taatgggtga aactggagaa catcattctc cttcagtccc cagctctgtc caaatgttca
      481 tgccttttga gggagcattt gtcctacccc ctctattccc agatgattga gaactgtctt
      541 actgcaggtt ttcagctgta gatctctctt tattcatacc atatgcagca gcagtttgag
      601 attcaaggca gatatatttc ttcatgttgt ctagagacag tgtcattagg
//
LOCUS       KCPA01000084             524 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 9273tic ultra-conserved element locus
            uce-2788, sequence.
ACCESSION   KCPA01000084
VERSION     KCPA01000084.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 524)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 524)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9273tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>524
                     /note="ultra-conserved element locus uce-2788"
BASE COUNT          184 a           85 c          106 g          149 t
ORIGIN      
        1 ttaattggat tgcttgcata aattgcaata caaggtggac atgtgatagc tttctttttc
       61 accaatcagt catgtcaaga gaaccctatg tattttatat aaaaagtaga aaaaatgata
      121 atttgaaaag atgagaagac ggtgcagggt aaaagctgat attcttcctt tataacagat
      181 agccccaagt tgtaggggcc attatttctt gcattttcag agcaaatgaa cttgacagat
      241 ggctgtgtca cctaaacccc tacctaccaa cttgattatt cagaaaacaa tacaatagaa
      301 aagaaatcat tactgaagga acctggttag tccacagagg gctgagcggt gcagaagaac
      361 aaaattacag ttgtggaatt gaacagcaag aatacattta acataaagtg ggttacagcg
      421 aggcaatcag tcatggctaa agctattgtc taggcttgct tgcatggtat atgaagtaat
      481 ctgtcatcta ccactgaatt tatgcttagt ttatagtaga aaaa
//
LOCUS       KCPA01000085             689 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 9385tic ultra-conserved element locus
            uce-6101, sequence.
ACCESSION   KCPA01000085
VERSION     KCPA01000085.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 689)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 689)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..689
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9385tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>689
                     /note="ultra-conserved element locus uce-6101"
BASE COUNT          225 a          144 c          126 g          194 t
ORIGIN      
        1 aaaggaagat agcgtcagtt tgtatccctg cttcttcaaa attcattgct cttaaacacc
       61 atgcggcttc tctttaggag acctgaacct actcctttgc agcaagtgta tcattaataa
      121 cagcaagtta gaagtgcttt gcatttcatc tttctgaaga ttcatccact ggtgcatata
      181 taactgacag ttaaaattag acatatatta aaatcagtta ctgaagaagt cctctgtctt
      241 ccactgtgcc caaagcttgt aatggtctga aaccagccag aatatacagt aattgtcatt
      301 cagcaagagt ctatcctaga aagtcatgct tcagtggaga agactgagtt tccatttgaa
      361 atcaacaaat taatccaaga caggtatctg aaagggcaag tttaatagga agcagctact
      421 gggctctcaa ccatgataaa atgttattgc tgtttttggc tgggaacata cgatactctc
      481 tgcataagag ctccattgct gttcaggaga tatactgctc aagctatcaa aatgatgaca
      541 gcctgccagt ccctataaca acttgccatt ggatgtggca agagcttgtg catgtgcgtg
      601 tgaatttaca attaccaaaa ctccctgata agcagaaaag aagcccacat attaactgca
      661 catataatag aacaaaaacc ctcaaatca
//
LOCUS       KCPA01000086             585 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 9494tic ultra-conserved element locus
            uce-2023, sequence.
ACCESSION   KCPA01000086
VERSION     KCPA01000086.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 585)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 585)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9494tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>585
                     /note="ultra-conserved element locus uce-2023"
BASE COUNT          189 a          113 c           85 g          198 t
ORIGIN      
        1 aaaattcagc atacggtaaa caatactttt tttgttagaa taatgactta tttattcttt
       61 tatactgcgt agcacttggg gaccacatcc atttaccaaa ataataccaa attagtactg
      121 caaatattga aatcagacct ttcagactaa ccagtggcct aattttctct tcaatctgct
      181 cttaatctcg attcatcaat aacactgcct tattatagga ctttgacagt gagctagagc
      241 ttttgataaa ttatacatct caagccagat ttaaaatttg aagctcaagt gctaattatc
      301 tgtacaggcc tagttaataa cgagatttct tgttaagtat ctgatcacag catgggcatc
      361 atttgtcaag aacctcaagt ctaccttgga gactagctct tcgaattctc ccttgcctac
      421 catatgtaaa attgggatct ttgtttctat aataaccttt tattaggaag ctgacataat
      481 gattaagttc gctgtagaca catacaatga gttagacaat tacccttgct gctttaaact
      541 actcaggctc ctagcaagac aaaataatta atattgaatt ttaat
//
LOCUS       KCPA01000087             779 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 9604tic ultra-conserved element locus
            uce-7362, sequence.
ACCESSION   KCPA01000087
VERSION     KCPA01000087.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 779)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 779)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..779
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9604tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>779
                     /note="ultra-conserved element locus uce-7362"
BASE COUNT          249 a          156 c          167 g          207 t
ORIGIN      
        1 aggctttctg aagagggatt tgagcagctg ctgcttagca gagaatgaaa ttcagggggg
       61 aggagaaagg gggcaacaaa caacatttgt ttaaaatctg gcaggagcat cctaattaga
      121 tgaattattg aatggatcat caggattgct ccccaaagtg ccacagggca ggagagccct
      181 tagaggacat gttgatttaa gactgcaaaa atgatcccaa agagcaaatg tggaacacta
      241 aaggctcgtt tgtctcaaaa atcacacatc ccactcagcg ccattgctca cttgccatgg
      301 gttgtaacag ttaatcattg agacagggat aaatatttat tcagggacta ccttaacgtt
      361 gaatgttatt tcctccatga cgtaaactcg ttcaggaaat gctttagcca cctcctccac
      421 actgttaaaa tactgcactg gctccttaat atctcggtct tgttccagca gcttaaactg
      481 ccctgaaaac agatgataaa cagaagaatt gtaagatatt tatattggac aactgtcact
      541 gtggcaactg ctggctcaac ttcttcacca ttttgctcgg tcaatttttc aagttattag
      601 caacgaaaca agaagacgaa agattgtaga gtctcctgaa cctgccatga gagacctttc
      661 actggctagg gatgaaaaga acgtgggcag ccaaagtgaa actaaaaatt ggtttatcac
      721 atgctctcta gaaataataa ataattatgg aggcactcgc atttgtgtac ttaattcag
//
LOCUS       KCPA01000088             420 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 9710tic ultra-conserved element locus
            uce-2435, sequence.
ACCESSION   KCPA01000088
VERSION     KCPA01000088.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 420)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 420)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9710tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>420
                     /note="ultra-conserved element locus uce-2435"
BASE COUNT          126 a           63 c           90 g          141 t
ORIGIN      
        1 aataattgct ggctaacaaa tagcccagaa agcaaactag catgaactct tcccagattc
       61 aacaagactg acatttatag ctttattgta gcagagacat ggcatttgga ttcagattgt
      121 ttggactgta gagtgtcagt ataaatagct atgattgact tttgtatgga gcacatctgg
      181 aagcaattta tggcattcca gctagattaa agcatgtttt aaaggcattt caccagtctt
      241 tttttctggc tatggtgaat aaagtttcaa agacagttta gctgctgttt ctgttaatgt
      301 ggaccatagt gaagtcaaat taagggcaac tagggaaaat ggtgcatttg tttttgtttg
      361 ttttgctttg tttcccagaa tagaaaaacc ctgaagtgag tgtaactgga gttatattct
//
LOCUS       KCPA01000089             581 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 9818tic ultra-conserved element locus
            uce-4952, sequence.
ACCESSION   KCPA01000089
VERSION     KCPA01000089.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 581)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 581)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9818tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>581
                     /note="ultra-conserved element locus uce-4952"
BASE COUNT          181 a          123 c           88 g          189 t
ORIGIN      
        1 atgtctcccc taaagctgca gcaatcatgt ggcattagac acttccggaa tcctatagcc
       61 aacttgaaaa atcccagacc ccttttttcc ctaatttttg ctctgatctg taattttatc
      121 cacatttgca ctagtttgag cattctggct ctcccatctg aaagcctgca attactatat
      181 aattcttcgc aatttcacat gtcctaatat ggactgtaat ttttgcgcaa gacaatttcc
      241 tgctatttca agcatcaaca ttgtcaaagt tgtatgtaca taataaatgg gaatatcaat
      301 gcatagtttt tagcataaca tcttgactcc tcgataatta tatccgttcg gagcctacgc
      361 agaattagcc tgaattgcat ggtaactgct gctgctttaa aatttttaaa aattactcat
      421 aattttccca aagattacca agatctcgag tgcacaatgt catcagcgta atgaagagta
      481 aacatttatg ctaataatct gcaatttttt tcatcagcta taaagacaga ggctatatag
      541 cagaaaattt cagtcatatt ctgcaagagc agagctgcaa a
//
LOCUS       KCPA01000090             352 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 9926tic ultra-conserved element locus
            uce-1457, sequence.
ACCESSION   KCPA01000090
VERSION     KCPA01000090.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 352)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 352)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9926tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>352
                     /note="ultra-conserved element locus uce-1457"
BASE COUNT           96 a           77 c           64 g          115 t
ORIGIN      
        1 aaaatctgct gaacactaat tatttaacct tacctcctac ctactttctc tctttattct
       61 gaggtttctt aagggctgta atgagctgtc cccacacaaa caggccaaat tagtggataa
      121 ttactgctgg gtctgtgaat gttctcactc ctcctttctt acagtttcac aacattacca
      181 gaatggtctg tcacctccct accaattagg cacaattact actttataac attagtggtg
      241 gcaggcttat taccttggag aatatgtaag ggagggtagg ggagattggg cagtgaatca
      301 ggccataact tgtataatcc ttttactttt gcaagacctt tatacacagt ta
//
LOCUS       KCPA01000091             846 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 10037tic ultra-conserved element locus
            uce-1610, sequence.
ACCESSION   KCPA01000091
VERSION     KCPA01000091.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 846)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 846)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..846
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10037tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>846
                     /note="ultra-conserved element locus uce-1610"
BASE COUNT          202 a          190 c          172 g          282 t
ORIGIN      
        1 cccttctttc cgtttcgttt caaaagggca aaagtctggg tagcgagcgc ttgcccgcgg
       61 cccgtgccac gggcggtgct tgcctcagct gctccatcaa aagccgctgt actaacggat
      121 cctgactgca cttagctttg tttccctgat atggtcatat cacatcagcc agggcacatg
      181 tgacattaca tccgtaactt taagcatttt gttgctatct tcagttggag caatgttgcg
      241 attctcgagt atattttttg gcagtccata gcacatttat gtcagataat ggcctattat
      301 tgttctctga tatggccggt tttccacgaa agaatgaggc cttttttccc gcatttgaat
      361 ttccagataa taggctttga cttctggctg cacgtttatg ggtcttttca tgttatcaac
      421 ttagctcata gcgtggaact aaagaacaca gactgcaagt gacaggccag ccagtcagca
      481 aggcaggcct gtcagtatct ctcatccact aatgatttcc ctttagtcta ttttctgtct
      541 cattggccgt ttccttcaaa aacaaaattg ctcatttaaa ttcttatgcc tggggcattt
      601 tggtcttcaa atattgttgg aaagtgaaag gattaggcaa aatatgcttt tttaaaatgt
      661 taatatattt tctggttcac tttctcctct gaggccaatt aggaaatttc tgctggctgc
      721 attaatgtca aactgacaac cctcgctata attacactgt gcttgaaacc taactttcac
      781 ttgtgggtag atgactgcgt ctggcagtga cattgaattc gctctgccag cttttgatca
      841 tttaat
//
LOCUS       KCPA01000092             606 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 10146tic ultra-conserved element locus
            uce-4264, sequence.
ACCESSION   KCPA01000092
VERSION     KCPA01000092.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 606)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 606)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10146tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>606
                     /note="ultra-conserved element locus uce-4264"
BASE COUNT          208 a          128 c           89 g          181 t
ORIGIN      
        1 ccacacagag atcttaatcc tggattaatt attttccatt ttaattaaag cagtactgcc
       61 ttttcttaag ttctttatct actttcttca agtaaagcta tttaattctg gggattgtgg
      121 aaaacatttg ttcgtgatta tgcagacata cagtaaaaca agactgaaac aagagcagca
      181 tgcaaaaatg tatttaagga ctatcatccc aaaatgctgc taaaagctat taaccagtac
      241 gtgttaattg ccacagcatt catattaatt ttcacttcgg gcccgacatt gtggaatatt
      301 tcccctgata cattttaaac aaagtttaat ttaaggaact gcttctatca acacttatga
      361 aaattaacag ccaagcaatt agcactcatg aattatccct tcccccatgc ttgctacagc
      421 atcattttta tgagaaattg ttgcagccac aagaaacctt gtggcactac agagaacttg
      481 ccaaaggaag catttgtcca cccaaaaatt acattgacca aatttttatc tccagtagtc
      541 aagcaaacac cagagaactc cataagatca gaaaagcctt ctaactccat tcatgagagc
      601 agaaat
//
LOCUS       KCPA01000093             631 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 10256tic ultra-conserved element locus
            uce-5927, sequence.
ACCESSION   KCPA01000093
VERSION     KCPA01000093.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 631)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 631)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10256tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>631
                     /note="ultra-conserved element locus uce-5927"
BASE COUNT          220 a          116 c          115 g          180 t
ORIGIN      
        1 ctgctgctgg agacacaaga attatctgct gctctggtag ggaaacagaa ttaaaaaccc
       61 ctgaacatgt aggtccatta tttccatttc acaataatta tgcagtgtgt taaacaatgt
      121 tcacttccat ctgatgcaaa gcccgctacc tggaaataca caattatcat aataccttac
      181 tggttagaca tacggtgaga ccacgattat gcggaatgtt ggaagaactt tatgtataaa
      241 attattcttg aggagaagac catgaagtaa aaagctaagc cagcacatta tctaattctc
      301 aatgtaaaat aatgcagaag tgcggaagat gaacatctga tttgtcacat ctgatacgct
      361 aatgttttat ccaaaaggaa gaacacattg taacatgctc attcatctgc ataaacacca
      421 cctggccctt tacaggcacc tactcaagta acaaaagtta atggcagccc atttgtagcc
      481 atttcactgg tagagatgga aagaaagtaa catatttaca tgagtgtctg ttgaggaaca
      541 gctttgttct caatttgaaa cctcattctc agtgactgta aattaaggaa atttcaaaga
      601 aatgttagaa aatattattt aaagtctgta g
//
LOCUS       KCPA01000094             529 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 10367tic ultra-conserved element locus
            uce-1070, sequence.
ACCESSION   KCPA01000094
VERSION     KCPA01000094.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 529)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 529)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10367tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>529
                     /note="ultra-conserved element locus uce-1070"
BASE COUNT          187 a           88 c          120 g          134 t
ORIGIN      
        1 gaacccacaa atgcgcttcc cagacacact attgatttct gacctacaaa ttactctcct
       61 tcaaggaggg ctgatgtgga gcacagacag tgggggaaga gggctggagt agacagggta
      121 cttctcagct gcaatctgca taatgtttag tattcagtga gttaaagcac gcaatgaaag
      181 ggaactgtca gcgcaatcta gaagatataa agaaatgaag gggtgaaaaa aagccgtatg
      241 ctaataatcc actcagtaat taagtgaaga tcgctgccaa gcgccactgc cactttcaaa
      301 gggtaatttg tacaggaaat catagagtca ttgtcaaatc atttcaggat aaaaggaaag
      361 tcatcaacta agataagata aatgctgggt gtctggcagc atgtgcccta ggaaatgcct
      421 tatattggaa aaaaaatttg caaaagtggg tctagaaaat ttgacatgtt gaaatgcaca
      481 tttactatta ataatagagg tgatatatgc atagatgctt tattaaata
//
LOCUS       KCPA01000095             588 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 10476tic ultra-conserved element locus
            uce-5357, sequence.
ACCESSION   KCPA01000095
VERSION     KCPA01000095.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 588)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 588)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..588
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10476tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>588
                     /note="ultra-conserved element locus uce-5357"
BASE COUNT          187 a          124 c          115 g          162 t
ORIGIN      
        1 tccattgtgc ccacattctt aataactctg catctgactg tctaaatcca ggcttctgca
       61 aaaatcagcc aggaagatgc ttgcaccaaa cacagcatga gccttgagtt taatcggtta
      121 ctgtaataaa catataaaaa aagaccatga gaggacagag cagtggctac ataaaaggac
      181 atcaaatgac acatcctcca tctcccagca aataaaaaag ccatcagctc ataacaaggc
      241 ggtgataaaa ggtgctgagg ccagtaagat taagactttg taataaggtt cgggcgccaa
      301 aactgacagc cattttcttt tatatttatc atgtcttcac attggggtga gaagccagga
      361 gtctgtccca ttgctggcta gaatttatag cagctccatt attaggagat tgcactgaaa
      421 tggggcagag gtatggtttt ctgagaacgc tacaatagcc tcctacatta tacacttgac
      481 aggtttgtca gcgcttagta acaagccttg taaagtactt taatatcatt agcactattt
      541 tcttaatgtg tctgctctcc tagcagcctg aaaatatcat atatcatg
//
LOCUS       KCPA01000096             395 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 10581tic ultra-conserved element locus
            uce-2677, sequence.
ACCESSION   KCPA01000096
VERSION     KCPA01000096.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 395)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 395)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10581tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>395
                     /note="ultra-conserved element locus uce-2677"
BASE COUNT          138 a           65 c           71 g          121 t
ORIGIN      
        1 taagtgatgg gaggaaaaac ctgcagccat tccactgaat tctattattg acaacagcag
       61 aagtaaaaaa attagaaaac aaatcccttt ttaaatagaa tgaagtaaaa gacctacatt
      121 gcttggagga aatgctaatt gaaaatacct tgctaatgct agctagtcac aggaaggaaa
      181 cattaagtta ttatttttaa taatgtttac aagtatatcc agccatttcc agccagtgaa
      241 aaatgttagc cttggtaaaa tgtggcagtg ctacttttca ctggtgatgc tgctcatctt
      301 ctctctgata gcaatcatta attttatttt ttaacccagt cttcaaatga agacagatga
      361 gcaggagagt tttaaatgca agctgcttat gttca
//
LOCUS       KCPA01000097             580 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 10685tic ultra-conserved element locus
            uce-5594, sequence.
ACCESSION   KCPA01000097
VERSION     KCPA01000097.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 580)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 580)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10685tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>580
                     /note="ultra-conserved element locus uce-5594"
BASE COUNT          186 a           92 c          105 g          197 t
ORIGIN      
        1 agctatgcac agaaatatat acatttgatg gtcattatga cacatgaatg ttcaagacga
       61 aaagtgaaaa atacttttca agttctgtat atatgaaaaa ctgacaatga tctgtaattt
      121 gggtctaaaa attctataaa tctgctggtg ttttcagcat tgaaagcttg attctaaatg
      181 gaaaggtcat tatcattatt aagttttata agaaaatcag tacgtgtact agtatctatt
      241 taataactga gacatcatga atgtcagact taacacactt tgctgggtgc taataactct
      301 ttaagtgtac ccttgactcg agtcgaaggc agtattggaa tttttatgtt atctgaactg
      361 cctggtagca tttaaaatta cttccataat agtcaggtaa aaatatagtg acttcacaca
      421 actttaccta attttgctcc tgtttcaaag gttaagctaa actcctttct tgcgaaagaa
      481 ctggatgtgc aggcaggtga gtcacaatgg acctgtccta cttaaccatt ctcttgtttt
      541 tattggagca tattgtgctt cttgagaaaa ggatgtgtca
//
LOCUS       KCPA01000098             152 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 10785tic ultra-conserved element locus
            uce-2469, sequence.
ACCESSION   KCPA01000098
VERSION     KCPA01000098.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 152)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 152)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10785tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>152
                     /note="ultra-conserved element locus uce-2469"
BASE COUNT           24 a           32 c           58 g           38 t
ORIGIN      
        1 atggaggctg gtttcgggta cttaccctga atctgactct gaggctgagg gttaaaagct
       61 gtgctgtggt tcaaggaggc tcgagggttg ggtgtggggg ctgggtggtg tgggctgacc
      121 ctcatggccg tgcgacgcaa ctgctccaac tc
//
LOCUS       KCPA01000099             739 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 10894tic ultra-conserved element locus
            uce-720, sequence.
ACCESSION   KCPA01000099
VERSION     KCPA01000099.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 739)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 739)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..739
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10894tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>739
                     /note="ultra-conserved element locus uce-720"
BASE COUNT          251 a          126 c          113 g          249 t
ORIGIN      
        1 attctgagag atgagaacgt cccaaggttc cggaactgcc agggaactgc agcaggacaa
       61 tccatcgtgg gtacaacaca agttctttgt tcttgctcat gctttctttg ctctacatta
      121 acacattttt atcaaaaata gcaaaattaa ttttgcaaag ggatgattgt attgcaaatc
      181 actgttaaca ttaaaagact ggataaagaa ttattaatac cattaatgta atatctaagt
      241 tacacctata catccttttc catagaaaat ggttcttaat tttcaagttg ttctgcttta
      301 ttaaagctca ttaccatttc tcttttaata agtgctcttt aaagtcatta cctgcagtga
      361 agttaaaggc agagctatta aaaggttact ttaatgtgaa taatggcctc ccaatatact
      421 caagttaatt actattggaa actggttcta ttttaattta atgctgaatg cttaatgaag
      481 gatctgccag gatagcaaaa ctgacaaaaa ttattcatgg tcaacagacc tattcttgct
      541 gtttcattta aagagataat atccatttca agttctacat aactgcattt aaaaatcaaa
      601 attacatttt aatattttcc ctggatatgc agaaatgaaa aatgccactt ttgaatgttc
      661 aatagcatgg tatgtagaag agcgatgagt tcctcagctt gttaaaaata acattagaat
      721 cactaacatc ttgttccac
//
LOCUS       KCPA01000100             772 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 11001tic ultra-conserved element locus
            uce-1781, sequence.
ACCESSION   KCPA01000100
VERSION     KCPA01000100.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 772)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 772)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..772
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11001tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>772
                     /note="ultra-conserved element locus uce-1781"
BASE COUNT          207 a          162 c          178 g          225 t
ORIGIN      
        1 tcatgctgcg taagaggtaa agggactctc tcttcctctc ttgtaactcc cagatacgtg
       61 gacatgcatc ctcagtccta ctccccctcc ctaaaactgg gctaataggg aaggtaggag
      121 tatcgaaagg gggatagctt aatcacaatt acttgaacag ttgttcttgg tttagtgtct
      181 tggttcctgt ttaatccatc actggcactt gtatagtaca gtgggcttta tagcagatgt
      241 cagcttgatg cttattgtgg ttaacagtta acaagtgctg gttagacaca aaacctgcca
      301 tgtgcttgtt ttttttaaag aaggccacag tgttccctaa gggttgtgag agaagttcat
      361 cccattgaac tggtcagcaa gatatcatta gctcgttgtg tacatgaaat ccaggggtta
      421 gagcaccaag cgtcacaagc cagtttcttt acctccttga gctgatcaga ggatcagagt
      481 atcaaggaag gattagcact gacttgggat ttgtgtgatt ggttaattta ttgcggcgat
      541 ggcaggcctt tcatctatgg caacatttaa tcagcacggc catggaggct attacgggtt
      601 agctcttttc tcaagtcagc cagggctgca ccatcagccc tatcacaatt cccctgaaat
      661 ttccaaatta tctggaacag gctttagcct cacagtaata aaaattagaa gagatccctg
      721 atagcgctgg tggaaaaggc tttcacttgc acagggcaaa ttataaatag ta
//
LOCUS       KCPA01000101             746 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 11105tic ultra-conserved element locus
            uce-5857, sequence.
ACCESSION   KCPA01000101
VERSION     KCPA01000101.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 746)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 746)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..746
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11105tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>746
                     /note="ultra-conserved element locus uce-5857"
BASE COUNT          201 a          183 c          166 g          196 t
ORIGIN      
        1 tgcttgataa atgggacagg taacatcact gtggtattac aagactgtaa taaaccaaat
       61 agtgaatcca gttatcagca gcagtgctca tgactgagat gatgccatcc agcactactg
      121 atctttgtag atctttgtga tcgtgtaaca ctgagctcta ctatccaaga agctccaggc
      181 ctgtttaatt taaataaccc ccaatggaaa ggtcattgca aatcatgcag ccattaaata
      241 ggcttccttg gctccctgtt cagcctaaaa cgacactatt tccttcatgc aaattttata
      301 gctggacatg cttttgggag aagaattatc accagatgcg aggcagggag gggagggagt
      361 tgtgtggaag gtcaagcagg gctcagaaag atgtggaaag actaccgacc agccatctgt
      421 ttctccttac tccttctctt tttctccagc cggcggagcc tcttctcctc ccgcctcttg
      481 gcttcttcct cctcctggtg ctgacgacac ttgtggaaat tctccaccac cacccccaca
      541 aacatgttga ggacgaagaa ggccacaatc agcaagaagg aaatgaagta gaggagcatc
      601 catggattgt agttcatgac tggctgcgag gaaggcaaat ttcaactgaa cctcaaattg
      661 atacagctgt gcccctttca ggcagctcag gctgctctgc tcttcctttt ctgagacatc
      721 tgaatgctcc taaaatgttg aggacc
//
LOCUS       KCPA01000102             454 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 11213tic ultra-conserved element locus
            uce-450, sequence.
ACCESSION   KCPA01000102
VERSION     KCPA01000102.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 454)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 454)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11213tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>454
                     /note="ultra-conserved element locus uce-450"
BASE COUNT          137 a           86 c           93 g          138 t
ORIGIN      
        1 ttctaacagt ggggtaataa tttttttttt tttttttaaa tgcttcctag tcaaacttga
       61 atatgcaatg aagctccaga gctttgtggc ggaaatataa ttaaactggt gaaagatgta
      121 aaagatgaag aatggggatg acatcaggcc gatttcacac ttggcactcg gatggctggg
      181 cccaagccgt gctcttgcca cgcaacacag atcaaagtgc actgccactg ctaaaaaggc
      241 aaaaggggac ttaagtatgc taattcccag gacaaatata ttttaatctt gttagaatac
      301 aagttaatgc tgcagctcag tggctgaact ttgtcagagt gtagagatct acttttactt
      361 tagctctgaa tgaggtagac ctcctggttt attcatactt cataaaagta aatttactaa
      421 atgagcctcc ttgcagctca cctagatact cctt
//
LOCUS       KCPA01000103             282 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 11322tic ultra-conserved element locus
            uce-2995, sequence.
ACCESSION   KCPA01000103
VERSION     KCPA01000103.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 282)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 282)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11322tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>282
                     /note="ultra-conserved element locus uce-2995"
BASE COUNT           88 a           42 c           78 g           74 t
ORIGIN      
        1 taaataaaat cagtgtgatg ggtgagcagg tcgactgtgt gagagaacac gtgcaaggta
       61 tacctcagaa acactatagg tggatgagca cgaagggagt cgagcctggt tgtgcagtgg
      121 ggaaaagaaa acattgttaa aaaagaaatg gtggcacagt aagggtctca gaaggttttc
      181 tgtgtatgtg gttccagcac tgagatagtg gcattcataa agtttccatg accagctatt
      241 tcagaaactt caaatttatg ccttttaagg tggaagcttc tt
//
LOCUS       KCPA01000104             522 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 11426tic ultra-conserved element locus
            uce-1787, sequence.
ACCESSION   KCPA01000104
VERSION     KCPA01000104.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 522)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 522)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11426tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>522
                     /note="ultra-conserved element locus uce-1787"
BASE COUNT          149 a           94 c          101 g          178 t
ORIGIN      
        1 agcaactgct ctagctttgt ttattgtaca cataaataat tgtacttcaa ttagcatatg
       61 atcccttccc agattaaagt tgccttgaga ctgcttggtt tggctactgt aaatatgacg
      121 tgaatccctt caaagatttt acatgctgtt tttgaagtaa attattttct tctaatatac
      181 ctacacaact gtcacaggga attgaactgc agatttagtg atgttaagtg tcgattgtaa
      241 tttggtgaca accattttat tggctatgca tattgctctg ccaggaccta cttctcagta
      301 tggaggccac cgtatcatta aaacccactg atccttcaca gatgacataa tttgactggc
      361 agggagagga acagtgagtt gtttccacct gtgtggaatc tgctgtgtgt cagaaatgaa
      421 tttgccttca aattagaaac agcatagctg actagtgcct atgattttgc ttgattttaa
      481 ggagttttac tggaatgata caaatctgtt taaatatgcc aa
//
LOCUS       KCPA01000105             749 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 11538tic ultra-conserved element locus
            uce-2294, sequence.
ACCESSION   KCPA01000105
VERSION     KCPA01000105.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 749)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 749)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..749
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11538tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>749
                     /note="ultra-conserved element locus uce-2294"
BASE COUNT          204 a          158 c          120 g          267 t
ORIGIN      
        1 tctcctgtga ggatgaagtg gtcaaatatt tatacatatg atattttctc tactatttga
       61 ccattttgaa atttaaaata taaacattct ggtaaaaaaa cctgttttcc ccattgtgcc
      121 acagagtcaa agtctaaatc atttttgctt tgtctgatgt ggcatgtata aaatacatta
      181 aaggtctttg ttttactgta tcgtgaaatt aaaaaccgtg gagtctctgt aattacattg
      241 tcctttgccg tctctttaaa aaagaaaaag actgtgttca aattttcccc ctgttttatt
      301 tgcaccctat taacaactgt tactagagct ttaattatgc ccctgtgatt gcagagatgc
      361 ggctgacttg tgtcattttc ctcccagggg atgctttata attaccagca tccatcgtgg
      421 ctgcctgtaa gctgatgctt ttttattacc agttcaataa tcactgcatc cttgtgaaca
      481 tctgctctac aagccatgca tcggaggtcc cagtgcctgt cactcgatgc tcccttgctg
      541 tggcgaccct tttgccctca ccttcagttt atatctaatt tgcttagcag aagcttcatc
      601 cagattgcct cacaggaaca caattaatgc tccagatttg caaacaaaga aattttcccc
      661 tctttttttg tcttattatc ttgatgtcat atcctataat ttgtattcac agcagggtga
      721 atcaatataa atccaaaaat atagtattt
//
LOCUS       KCPA01000106             363 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 11640tic ultra-conserved element locus
            uce-3715, sequence.
ACCESSION   KCPA01000106
VERSION     KCPA01000106.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 363)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 363)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11640tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>363
                     /note="ultra-conserved element locus uce-3715"
BASE COUNT           99 a           86 c           68 g          110 t
ORIGIN      
        1 tgtcggcacc aatccgcctc ggcgcctccc cgctcctcag tcaggctttg tggcccctcg
       61 tcgcttgttg ttcaagctgt gtgtcacagc cagtcacaac agttacttca agcaaatttt
      121 cacactcttt ggctcaaact gctggcagca ttcctaaaga ctctgaggaa ataattccac
      181 aaagtggcat aaattaatgt gactaattaa catgatgtta attatttgta aattgtatgt
      241 ttggatacac attacttgag aggcatatgt tacattcagt gtttactgaa acaagtgact
      301 gctaatcgca tctcctgagt gttcctttca caacagtcag caaatagagg cttctctaaa
      361 aat
//
LOCUS       KCPA01000107             683 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 11747tic ultra-conserved element locus
            uce-2874, sequence.
ACCESSION   KCPA01000107
VERSION     KCPA01000107.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 683)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 683)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..683
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11747tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>683
                     /note="ultra-conserved element locus uce-2874"
BASE COUNT          181 a          154 c          122 g          226 t
ORIGIN      
        1 aaagtccaca tttacaatct atcctaaaaa caagcagagc actgcaccaa cccaagcatt
       61 agctcaatta aaaaatgaaa tcccttctca gcttaataac ttgttagttc ttgacaagtg
      121 caacaacaca acaataagcc agtcaaaatg agtttttaaa gcgaggttat gcccttcatg
      181 ttgtgttatc acagtggcag atcaaactgc tgacttggac tctttctgcc agcagtgctg
      241 atgctgcctc tatgagctac tgtcacagaa tagtcatggt acctgctctt gcctatagaa
      301 aagcactaaa ttgaactcga agtagtgtct ttgtgatatc ttttcaacaa gtcatgtccc
      361 attcagcctg ctagtttatc tctgtcaggc tgggggccca agtggtttgc atgagctgtc
      421 agggacaggt ctaccaacct gctcagtgct aaggaggtaa tgcatctttc gggcttggta
      481 tttcttttcc ttttctttct tttctaggtc tttcattttc tcttcatttt ccttcatttc
      541 tgcgtactct tgaagttcac tcctgtgtct gctaactaca ttataacaaa cgacgtgcta
      601 gtcttctatt ttactttaca tagcttcata gggttttgtt ctatatatta gcagtatact
      661 gacaccacgg gaatgtaaaa cta
//
LOCUS       KCPA01000108             603 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 11853tic ultra-conserved element locus
            uce-1538, sequence.
ACCESSION   KCPA01000108
VERSION     KCPA01000108.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 603)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 603)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11853tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>603
                     /note="ultra-conserved element locus uce-1538"
BASE COUNT          164 a          116 c           99 g          224 t
ORIGIN      
        1 ccataattaa tttttgctat tagttgcatt gcaggacagc aagtaccagc aggtatggtt
       61 attttagttt ctaatgcagc agcctttcat ctctctctgt aagatttacc tttaaccaaa
      121 atctttcacc cgttatctat aatgtataat tataaataca ttgtagtcta gagtaagtac
      181 aattaaaaag ggtaattagt ttccctccct ctctcccatc ctcccaccaa agtccttagg
      241 tttaattttc atgattatgt tagattatga gtcattttaa atcatggtat ccagtagaga
      301 ctactcctac tctgcagctc ttttcaacag ttgtttatgg tagtttcagc ctctttctgc
      361 ctctctgagg ctctttattt ttaaagcaag gcagacaagg cctaaaatta ttccattaaa
      421 gaggtgcaat ttttgtaatg ggacttagag tgctctgcag aagtgcaggc aagtttcttc
      481 aatatcctga gcattattcg ctcatttagt taaatgatgt ttctaattcc ctggtaatta
      541 catgtaatga ggcactcttt ctcttcttga tgagacttta gcttaatatg agatgtcgta
      601 ttt
//
LOCUS       KCPA01000109             602 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 11959tic ultra-conserved element locus
            uce-4332, sequence.
ACCESSION   KCPA01000109
VERSION     KCPA01000109.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 602)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 602)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..602
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11959tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>602
                     /note="ultra-conserved element locus uce-4332"
BASE COUNT          176 a          115 c           93 g          218 t
ORIGIN      
        1 ttcttaatta ttagatcacc agcatcaaaa aaaaggcata ttaaaccttc caggaatgga
       61 tgcagctttc ctcaaatctg gttcagtgct gcttctctgc atgtctgaaa atcagaaatg
      121 gctttgccat ctcatactgc ttctgtttgt ccattctttc tgtctctgtt ttcatgtttt
      181 catttttcta tggctgtgtg gaacacattt ctcagttaag tacttgcttt tgagagttgt
      241 tgccataaca accgtttcat tccacgatat gcacactatc tctgaaatac agaatttctc
      301 cttaaaggag catgtgccac acacatcaaa gaggaatata gactcattat ttttacatta
      361 ttttgtgggc aaatagatgt tttccaatac atccttttct aactggattt tcttgttcag
      421 tgaaactatg ggtttttaag cattcctatc tcatagtata attttttgcc tgaaacccag
      481 aatataagaa gacaagaatc tttattgttt tcctccaaag gtctgagaga actatgctgc
      541 agttaatgca tttaaaactc atcttattag gcagattatg taaataaaat ccattaaaaa
      601 tg
//
LOCUS       KCPA01000110             523 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 12068tic ultra-conserved element locus
            uce-761, sequence.
ACCESSION   KCPA01000110
VERSION     KCPA01000110.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 523)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 523)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12068tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>523
                     /note="ultra-conserved element locus uce-761"
BASE COUNT          164 a           92 c           86 g          181 t
ORIGIN      
        1 tttcctcttt gcatctttag gctagttctg ctgtttgcta tagtaatatt tgttttagca
       61 tttctatcac tccaatacgt atacttgcct ttcaaaatct gtgaaaagta tttaaaagaa
      121 aagagaaaat gctagtattt caaaacccta ttataatgca ttttcaaata tgtcagacac
      181 atctttgtta aaattaaacc aaggattggt tttgagcgaa tagccctata tccttacaga
      241 tgctgtggat ggatgcatct aagctgctta ttatattgat gggttttgct gctctgcagc
      301 aaatgaaaac aggcagctgc ttcctccatc aaagcaaaaa gcagcctgag tttttattaa
      361 acgagtgttc atttcttcta ttgccaaaat tcttacacaa aacaaaagag cagttttagc
      421 acattattgc ttaactagac atgaacaact gacagcaagt gataagcctg tctgcttttc
      481 acaactggta atcatttttg gaatagatgt tttaatatag ttg
//
LOCUS       KCPA01000111             619 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 12180tic ultra-conserved element locus
            uce-4494, sequence.
ACCESSION   KCPA01000111
VERSION     KCPA01000111.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 619)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 619)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12180tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>619
                     /note="ultra-conserved element locus uce-4494"
BASE COUNT          204 a          105 c          122 g          188 t
ORIGIN      
        1 ttttaaacac ttgaagatca acaggaataa ataaaagtcc tcttttgtaa acaactttgt
       61 gtattaatta ttattgtaga tcttcccaaa tacctttttc agtaagtgtt ttaaagcatt
      121 gagtctcatg ctgcatttta ccttaaagga aatgctttat tttgaagtgt acaaaccttt
      181 cctgcaagtt gtaaaaaact tttggctgaa atctgcacct ttgggaagaa tttctgatgt
      241 gttcagaaca tggaagattg gaaatcagga ccagtttgta tgtcccctgg tgttgtcaga
      301 gcttcaaatg acccaacagc ctgcaaatgt cacatttaaa attcagtctt catgcctgac
      361 tctcagcata aatgaattaa acagcagagc aggcagccag tcaatatgtt cttaacagtg
      421 agagtgagca atgaaacagt ttgggggttg tttggaatca gtaaatagaa agtgcatgga
      481 atggctcacc taaaggaaaa tctcaaacag gaaacagaat taacctttaa aatggtcgag
      541 cagacaaaat gtcatagcaa tatttttaca gcattaggtg ggtaataacc acggagcgtt
      601 catttggcta ctgtgttac
//
LOCUS       KCPA01000112             405 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 12289tic ultra-conserved element locus
            uce-4629, sequence.
ACCESSION   KCPA01000112
VERSION     KCPA01000112.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 405)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 405)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12289tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>405
                     /note="ultra-conserved element locus uce-4629"
BASE COUNT          121 a           72 c           75 g          137 t
ORIGIN      
        1 tttttccttt aaatttattc ctttgcaact gactctgtct ctctgtctga aaggcaaaca
       61 ccacctaatt tcttttcttc aaggttaaga aatccatagg tgtagggcat atttagtcaa
      121 tggtttgtct agtgtagact ttattttagg agcaaacata aacacgaaga aactataatc
      181 ctggtgtaat gtaggaatct aattaagact aatgaggcaa cattaaattt aatgtatgat
      241 gcattttata tgccttacca ttagagctgc agcaagctgt tcgtcagagc gtcaaacttt
      301 ggtggataag cccctcaagg cattcttaaa caatctgggc tcagaccttc ttctgcccat
      361 taggttttgt tggacttgga aaaatctaga tgtaaatgga aattt
//
LOCUS       KCPA01000113             639 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 12399tic ultra-conserved element locus
            uce-7218, sequence.
ACCESSION   KCPA01000113
VERSION     KCPA01000113.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 639)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 639)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..639
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12399tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>639
                     /note="ultra-conserved element locus uce-7218"
BASE COUNT          171 a          109 c          149 g          210 t
ORIGIN      
        1 tcaagctgcc tgagctaact agctttgtag agggctatta tccatttaca atcaagtcaa
       61 aatagcttgt acttatatag ttcaccttga tacttttagt tcagcacaga tacagattga
      121 atacaacatc atgtaggaat atggggacca aagtacctga tttccattgg cttgagtctg
      181 ttttggtggt gtctcatgaa ctgcaggact aactgtagta gagtatgtat aagccacctg
      241 tggaatcaaa atggtttgct tattggcagc gagagctctc aagcagggaa cactgttctg
      301 gtcagcaatg gcaacaattg taggtaactg ggcagtgact gtaggtatag caatatttat
      361 gggattggca cttggtggga ttacatttac aataggatca gagtctgtaa aactgttgtc
      421 cttttgtggt tctttttttg cacaagttaa gttcaaaggt tcttcttgga cagaataaac
      481 actgttctgg taaacactag ttatggtaga tctttccaac agttctccat gttgctttgg
      541 tagcgaaagg tcaagaggtt ctatttgtgg ctcttcttgt acaccctctg ctgtgtacgt
      601 gtaaccctgt gaatttcttg atgaagaaag gtttagtgg
//
LOCUS       KCPA01000114             853 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 12512tic ultra-conserved element locus
            uce-231, sequence.
ACCESSION   KCPA01000114
VERSION     KCPA01000114.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 853)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 853)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..853
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12512tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>853
                     /note="ultra-conserved element locus uce-231"
BASE COUNT          304 a          135 c          142 g          272 t
ORIGIN      
        1 ttggtttcag ttgtgtgcat tgatatctca ctaattctat ctaatttaaa gaagtcactc
       61 cagttttaca ccagtgctac tgaaaatcaa aatctggccc attgtcttag caaaatacac
      121 caagtcaata tcagttcatt acagagagga agagagaaag ggaatgaggg agaaaacaag
      181 gatttcgtta gcaatgcatt ctgtagtata aaagataaaa aggaatatcc aattaacaca
      241 ccactataat tgcttgcaga cattcttttt tatttaaaga tgaaatagct aagagttctc
      301 atcaaaactg gggtcacagc ctacatatta aatgaaagaa attgattggg ctttattaca
      361 ccctgactac tgcaaatgtg cctcaatcac tgattgctat aaatttattc ttataaacta
      421 ctaattgccc aagtcataat ggtaacaatg gtataatgaa attatcttga tcaagctgat
      481 gcacaaattt tgcttgacaa catgagcagt gtgagaaaaa aggaaagaag acatgcatac
      541 aaatacataa tgtttcatta aaattaaaac caatgttaaa acaactgttc tctgaagtat
      601 acaaagttct gtattagaag ggcttccttt agaaaaatca tttaagaaga caggcattta
      661 catttataat aaaatgatct tgcatttttt atttgtcttg aaaattaatg acttacttaa
      721 tcacatttga tcaaaggaga taagttgatg tagtcatgtg tttctgattg cattaagcct
      781 gatccagagt ggcatgatgg atatttaata gtcttgctgt ccctctatat cttgtcacca
      841 tgtcttgata tgc
//
LOCUS       KCPA01000115             645 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 12624tic ultra-conserved element locus
            uce-47, sequence.
ACCESSION   KCPA01000115
VERSION     KCPA01000115.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 645)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 645)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..645
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12624tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>645
                     /note="ultra-conserved element locus uce-47"
BASE COUNT          189 a          164 c          117 g          175 t
ORIGIN      
        1 agataatgcc gaggatgctg tcaacgcgcc ttactgactc ctgtcaaaat attttaccta
       61 gtagctttat aacccatcat tttcaagcta cagctcagca ttctgacacc attttgacag
      121 gcaccttata atacctaaaa gatagcttga tcaatgttaa aaatgtctgg tacaagaagc
      181 agccaaaatt gacagtgacc agagcaagct gaacagccgg gttcattact gtgtaacaac
      241 ttgtaagcca ttgacaactt ctaccgtgca ctctaaaccc cgtgtaaaat atcataagcc
      301 gttgtttgtc ttactctcca ctgtgtcttc tgccttcaaa aaaaggcaag atttgattat
      361 ctccgctgca tcagccaaga cagcaacacc agctgttctc attgtgcagc ctcttcctca
      421 cggcctacat gttaataacc tgatcattcc attttctcct tcaactgccg gctgcagcac
      481 agtgaagaga caaaaaccca ggcccatctg cagcagctgt aggcactgaa ctgtgaagcc
      541 accagggatt tataaactaa tctgtaacac aacactgcct tgtttttaca agtgagaggc
      601 cacatttgtg cagacctgat cttttcttgc aataaacttg gaggg
//
LOCUS       KCPA01000116             385 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 12722tic ultra-conserved element locus
            uce-5743, sequence.
ACCESSION   KCPA01000116
VERSION     KCPA01000116.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 385)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 385)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12722tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>385
                     /note="ultra-conserved element locus uce-5743"
BASE COUNT          112 a           63 c           97 g          113 t
ORIGIN      
        1 aaaaaaaatc cgtgatcatg tgggaaatgt tgattttaat ggaaaaattg cattgtgctg
       61 actttcatag agtagaaaat ccacagagtg agacttcagg cttggcacct gctccagaac
      121 cttcctgatg aagcaaaggt tgtcttcatt aagagcatta atattcatgc agcatggtaa
      181 ttttgacaca gaaaaggtct ccgtaacctt ttcttgtgtg agaatttttt acttctcaag
      241 gaaattacag tccagcaatg acttaattaa tgctgggttt cttcagtgga ttttgaagag
      301 ctgtcagttt gggcttgtgg tagctgtcaa gcagggagag ggctctggct aggtagattg
      361 aagggatgga gggaagacac cccag
//
LOCUS       KCPA01000117             357 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 12825tic ultra-conserved element locus
            uce-7103, sequence.
ACCESSION   KCPA01000117
VERSION     KCPA01000117.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 357)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 357)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12825tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>357
                     /note="ultra-conserved element locus uce-7103"
BASE COUNT          100 a           89 c           62 g          106 t
ORIGIN      
        1 agcagctcca tgacgccgca atgctgcggg acgtgcggct cctgctgaag gctcctgccc
       61 cattcccctc atgcaatccc ggggaattat ccatatctct gacaagagaa taggttacta
      121 atgcaccaac acagctgttt tgacactttt gatgaataac attcaatact attaattgga
      181 acaattgctt ttcatttaac taaatcacta gaattgctaa actaaattga aacggaatgt
      241 aattttgcct cgctctcctt taatatgggc ctctaaatgt cttctccctg aagaattagt
      301 aacttaatca cctaccagtg ataactgttt catagccctc agctggaagg ctttcct
//
LOCUS       KCPA01000118             676 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 12934tic ultra-conserved element locus
            uce-2870, sequence.
ACCESSION   KCPA01000118
VERSION     KCPA01000118.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 676)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 676)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..676
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12934tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>676
                     /note="ultra-conserved element locus uce-2870"
BASE COUNT          180 a          128 c          147 g          221 t
ORIGIN      
        1 ctaattttct tctggtagga acatcactgg gtgattgagg cattatcact ttgaaaagaa
       61 ccttaatcgt gtgatcagtc tataaactag attttgctca gtgcaagctg gggtgctggg
      121 cctggccccc ttggcttcag gggaaccact cacttcattt tacatggtct ggactttgaa
      181 tttaacccta ccaaatatac aataagagtt aatcttagta aattattctg agctttgcaa
      241 atacttgttc atttagtgtg caggagtttt gtttacaatg ggcattgggg aatgtcagtg
      301 caagaagagg tggacttaat gggttaaaaa ctgtgtaaat gttactctag ttaaattaca
      361 gcttgttgtt cagatgaata ctctccactt ctcatatagc tttaaattat ggacaaatgc
      421 ttgcaattgt gaactaccta cattgtggct gcctgttccc aggcttcatc aaccctagct
      481 gtccaatggg attactgtaa gctttcacgg cagtctgcca gccactgatc agaaattcat
      541 atccctggat gttagattgc tctctttatt ccatccttgt gatggctgtg attgctgtca
      601 tggtgttagg ttagaaatta gcattttgtg gcccaaattt tgccatccag aacataatca
      661 gaaaaaagag gggggg
//
LOCUS       KCPA01000119             603 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 13043tic ultra-conserved element locus
            uce-6938, sequence.
ACCESSION   KCPA01000119
VERSION     KCPA01000119.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 603)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 603)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13043tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>603
                     /note="ultra-conserved element locus uce-6938"
BASE COUNT          202 a          102 c           97 g          202 t
ORIGIN      
        1 aagaaatgtt tgctttattc tctgcataga tgctgtccaa gcaaaattct cagtatatta
       61 atataaactg tctgaaaaaa ttctactcga ttccataaga ccagcaaaaa caaaacaaag
      121 ggaaggatga cgtttatgtt cctctagcac aaccatgcaa gctgagctgt gaaactgtga
      181 tggaaatatt agagctgttg tgcctgaaaa aacacagtga tcatttcatt cttcctgtct
      241 tttaatgctc cagggttttg gagacgaata ggagcaataa gttcactttg cagaattaat
      301 gctgtaattc tttatcataa gagcagagca ttacctcaat ctgatttttc tacaaaatgg
      361 ttcaaagtct atttttaatg atggccctaa tttgttaaca ccttttaaat tattaatccc
      421 ctttatattc aagtagttat tgcatgtcat aacaatgtat ctatgcaggg aaatttaata
      481 gtattttctg catgtcaaga aaaggcttgt tctgcaaaat gctattaaaa ctgataatga
      541 gctaaatatt tgccatagca aacactgaaa ttactatatc aatcaacttt gggttctctt
      601 att
//
LOCUS       KCPA01000120             633 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 13153tic ultra-conserved element locus
            uce-4553, sequence.
ACCESSION   KCPA01000120
VERSION     KCPA01000120.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 633)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 633)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13153tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>633
                     /note="ultra-conserved element locus uce-4553"
BASE COUNT          198 a          128 c           99 g          208 t
ORIGIN      
        1 tatttggatt aacttccttc taaacttcca aacagttcca aatcaatccc aaaaactaag
       61 tgtgctccaa gttctcattg agttttctta ggctaaagca ctggaaactt cttagaaaat
      121 aactgcttga taaaagcata taattttgaa accactcaac aaaatactca tcagaaggga
      181 tctcttgcta ttgctcccca catgcaatca atatatcact ttaactacag tgcttttacc
      241 ctctgtttat catcccttct gaagccatgt ggaatactca tcttctctaa tccttgtcta
      301 tagtatttcc aaagtacttt acaagcttgg agtaatggac tttaatgcct tgcagcagct
      361 gagctggtag catatatgat accttaaatg taacaatcaa aggagcatgc aagattttgg
      421 tatttccgct gacttgcaga tgtgcagtac ccaggtccaa aaacagtaat gtcaagttta
      481 gactaaaagt gtttaaaaca atataatatc tcgctgctct atgtcaacac tcctataatg
      541 tgagaggata ttctctgata gagagagcac tggtattaaa tatctgttat ctgagctcta
      601 cagtaatttc ttttttgtat gtttgtccat gaa
//
LOCUS       KCPA01000121             489 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 13258tic ultra-conserved element locus
            uce-2879, sequence.
ACCESSION   KCPA01000121
VERSION     KCPA01000121.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 489)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 489)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13258tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>489
                     /note="ultra-conserved element locus uce-2879"
BASE COUNT          140 a           95 c           95 g          159 t
ORIGIN      
        1 attcaaaaag aaattctatt tcaaagcttt ccatatgcag accaaactcc tttatgacct
       61 aggatagtct cagttacacc taagagttgg catctcacct cttgtttaca attttatact
      121 aatcacctta ctgacctttc agtattgaat ttatttgctg ttgcagtgcc ctactctcta
      181 ctgtctgaat attaaatgtg tttgttttcc cagagggcta gagaacattg gacaaaaggg
      241 ttcagcagga gagagtgaaa taaaaagagg ttgtgagtct ttaaccttga gcctgaaatg
      301 aatgtgaacc aaactccaga tacttggctt agatgaagcc aggtaaacat tcgagtataa
      361 gcccacacac taccaaccag aaccagctgt tggtgcttcc caggctttgg ggattttgcc
      421 tagatggttg tacttaggac tgacattttt cttgtgatgg gttgtagtat ctaaaattct
      481 atttctttt
//
LOCUS       KCPA01000122             555 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 13365tic ultra-conserved element locus
            uce-2933, sequence.
ACCESSION   KCPA01000122
VERSION     KCPA01000122.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 555)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 555)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13365tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>555
                     /note="ultra-conserved element locus uce-2933"
BASE COUNT          162 a          149 c          104 g          140 t
ORIGIN      
        1 aaggcagagt gcacacagaa aatgttccgc cattcagagg tacaaaaagc agtaatctta
       61 gcctgaaaca atggtactga actgaagcac tactcctctt ttctagatct acttttaaga
      121 tccctgtcaa aacagccctt caaacacatt tgattgggtt ggggctcatc acgctgtcac
      181 caactcactt ttcattaggc tgttgctctc tgttagccta gccaagcaga agaactcaaa
      241 cacatgcaca aattaaatcg acatccaaac tccaccaata tacaaagcaa tttaaatgat
      301 attcattaga gcgatgacaa gtcctgatga ggctttcagg agcggagtcc ttcagcttct
      361 gccgactcgg tttcatggtc attgaggcgt aactgcagtg actgtacctc cagtttagag
      421 aagccaagaa tatgactccg cttcctgaca cacctacctc attcttctct gcacaggttt
      481 acagctgagc acaggctaca gctcttcccg ggctgtgcac tgctccagca acaccaccta
      541 caaacgtgcc aatta
//
LOCUS       KCPA01000123             530 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 13474tic ultra-conserved element locus
            uce-5083, sequence.
ACCESSION   KCPA01000123
VERSION     KCPA01000123.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 530)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 530)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13474tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>530
                     /note="ultra-conserved element locus uce-5083"
BASE COUNT          213 a           99 c          100 g          118 t
ORIGIN      
        1 aaacaaacag atttataact gaagactgaa aggcaaacag caagcaagcc aagtactgaa
       61 cctaaatgta gcatttttat tgacttctta gaaaccaaat aacctggcat attagtgtgt
      121 gcattctgca acagacattc agccccattg tactacttag aagagaataa aaagaaaccc
      181 tactgtttga aatccagcgg aacatcccca caacagagca caactgttcc ctcatgcatg
      241 aatgggaagg agatgaaaga aaagatggac ttctgaggta cagcaaaaaa caaagacaac
      301 aaaagtgctg atcatgaggg aatgacacaa ctcattgctg caaaaaggat gagagaaagg
      361 agctcaaaca atggtgcaga cagctaagtg acatgtagaa gaattgaaaa atctacagaa
      421 gtgtcttttc tttccacact tgacgagaaa caattaaatg ttggtacatc tgtcataaaa
      481 aagataattg aaacctgtta ccatcattat agatggaaac ttaactacca
//
LOCUS       KCPA01000124             526 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 13581tic ultra-conserved element locus
            uce-786, sequence.
ACCESSION   KCPA01000124
VERSION     KCPA01000124.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 526)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 526)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..526
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13581tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>526
                     /note="ultra-conserved element locus uce-786"
BASE COUNT          173 a           89 c           78 g          186 t
ORIGIN      
        1 cccttgcttg ttgccctgta aagccataat tatttatttg gggagtcctg taagccatgt
       61 gaattttctg ggaatgattg gaaatgtttc cagttaagct ctattaacat atcaagcagg
      121 aaaactaatg tttctaccac atattttatt aagcccttta ggtcctttta caagagagga
      181 aataccaatt aacgtataat ttagcagaac aaaatattat cccatttcaa ccagtaccca
      241 cttccttgaa gtttattcaa gcattaataa ccatttaatg caatttaact acactgaggt
      301 atccgttaca ttaatatcat atatccatca ggaaattaga gttttgtctc tatgaatttt
      361 gtattacaag aaagtcttta taattttatt ctgcacttta tggtggctaa tttcagtttt
      421 aaaatggttc agataacttc ccagtctctg cactgtaata tgactaacaa attgttactg
      481 atgttaaaag atcatgaaca catcatttat taaagagaga gaagtt
//
LOCUS       KCPA01000125             719 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 13690tic ultra-conserved element locus
            uce-6530, sequence.
ACCESSION   KCPA01000125
VERSION     KCPA01000125.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 719)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 719)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..719
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13690tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>719
                     /note="ultra-conserved element locus uce-6530"
BASE COUNT          240 a          165 c          128 g          186 t
ORIGIN      
        1 cagtttggca ggatatgcac tacttcaggt aagccagaat aaacagtagc attgattaaa
       61 aggagccccc tattctgcac cttcacctcc tttgccacaa aggcctcact ggtttattta
      121 cctgtagagc tgttataata ttttgctttc taaagagatt tggaagccac ctgccgtacc
      181 tttggcattt ctttaacaac aaagcactcc aggctcaagc gcaagagccc attgttctgc
      241 tccacgacat ggaaaagaag atgaatccag aagcacagga tccaaacaga aattattatt
      301 gatttaatca cataatcagc agcaaacact tcaggctaag atagcaaatc cataacagcc
      361 tgcccacata accaccctta caaatttacc agcaaaccac tgcgcacact tagcaaacaa
      421 gaagagcaag ggtcaccttc acttggcggc aaaatattga cattcctaaa gcttaaatat
      481 gttttgagtt aagtgttatc aatcagtgat aagagttgaa tgtctgttaa acataactac
      541 attggcagaa ggattataga atgctttctt gccataatct agaagcatct ttcagacaaa
      601 actctgcttg aaatcaattg tgcacaagga gctgcctgct gagacccatt cagtgacata
      661 caaaggaaaa gagagtctcc ctgtgatctt taaccataac cggttatcta atgagacca
//
LOCUS       KCPA01000126             654 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 13798tic ultra-conserved element locus
            uce-665, sequence.
ACCESSION   KCPA01000126
VERSION     KCPA01000126.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 654)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 654)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..654
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13798tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>654
                     /note="ultra-conserved element locus uce-665"
BASE COUNT          171 a          146 c          132 g          205 t
ORIGIN      
        1 ggcgataatg tacaagtgca tctgccctca aacacaaaat caaacacggc tttacaaggg
       61 ctgtcgccat tccactttag ttaaagactt gcaagcttcc ttcttccctt ttgcagggct
      121 gcagtttgga agctgctgca tctcatcagg gctcggtttg ccagtgctgt actgtacttc
      181 attaggcagc tctatttaat ggtttcaaca aaagccatca ttttagccca actgccttga
      241 ctaaattaaa atttccaatc tctgttttag tgttctgcaa ctgatgtata cataagcaaa
      301 actggtcaac atctgccagg gggttggcca aaagttctgt aaagatgtac ttcacatttc
      361 tgaagcatgt gcaaagtaac aacgtactta tcctcctgag ggctctcatg attttacttc
      421 accatttgtt cagacacact ttagcagcat ataagccata cagttgattc tccccttggt
      481 tgcagtttta tctgtagtgt cattttgagt aattggggta tggtagctga tcaactttca
      541 ggtttctcat tggcagaaag ggactgtatt ggcaccaaga aagaatatga tgggtcctct
      601 cggtagtgtc cctcttttgc acttggctac ccaaggccat tagaaaataa gctt
//
LOCUS       KCPA01000127             692 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 13911tic ultra-conserved element locus
            uce-54, sequence.
ACCESSION   KCPA01000127
VERSION     KCPA01000127.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 692)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 692)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13911tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>692
                     /note="ultra-conserved element locus uce-54"
BASE COUNT          193 a          151 c          121 g          227 t
ORIGIN      
        1 caaggttggt gtgtaagcaa ttattagaga tacctattag agttttccca agttccttat
       61 tgtagtaggc aacaagcatg ttggatttag ctagattata agtatggtta tttactaaca
      121 gaagctgatg gttttctctc ctctattttt acatttgaga ataaaataca atttatattc
      181 tgggcatcat cttgtggaag ttctaaatca cttcatgagg ctttcagcct aggttatgtc
      241 atttatccat cagcactcag tccatttaat ccagacctct cagctgtaca gacctagctc
      301 ctgttgtgag tgatcggcct gcttgagtgc tcccagcttc tcctgtcaca tcacatttgc
      361 ataaaagagg acggataacc aaatttgagc acacaaatga aaatgctaag cgctgaacct
      421 gtcacagttg ttgttcaact aattgtgaaa aatttgattt gctagctttt cactgtttat
      481 catgtggacc cccttctcaa atttgccttg gcttctgctt ctgtacatgt agcttttaaa
      541 ctctctacac aagcagccca ccctggggat tacttacctc tcctaccagc ttttaatgtt
      601 ggctcatcta cttgactaaa ttaggccacc atggcaaaca aacacataat taaaaacctg
      661 ggaaagacaa ctgcagttgc acttcttaaa tt
//
LOCUS       KCPA01000128             548 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 14020tic ultra-conserved element locus
            uce-6512, sequence.
ACCESSION   KCPA01000128
VERSION     KCPA01000128.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 548)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 548)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..548
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14020tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>548
                     /note="ultra-conserved element locus uce-6512"
BASE COUNT          194 a          103 c          110 g          141 t
ORIGIN      
        1 tctctaagca atacacatta gttttcaaca ttttccacaa taacattctt ttgtcaaagc
       61 tatgtaacaa tgtataggga catcaggaat gcaaatcaca aataaaagac aaacatagaa
      121 atgaggaatt tgacacagag atcaattgtt ttttttacat gcaaatgatt atggggcttt
      181 ctgcccaacc cagggagtgc agacatgcag agcaatggat caaggcgtgc acttttcctc
      241 tgcagggaac catggagatg acagcacaga agagaaaagg cacttacagt tgttctagag
      301 aggcaagtcc tttaaatgct tgcctgtcaa ttgactggat ttcattcttg tacaaatagc
      361 tgaaacaaga aacaatcagt aatattagta cacaaacaag agctacatga aggtggaaaa
      421 gaagaaacac atgaagacag ttcagctaca tattagaaaa atattctgtc cttgagattt
      481 catcccaaat gactactagg gaagtttggg gccttgaagg cccatggact tgagcttccc
      541 aatgctca
//
LOCUS       KCPA01000129             675 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 14131tic ultra-conserved element locus
            uce-2845, sequence.
ACCESSION   KCPA01000129
VERSION     KCPA01000129.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 675)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 675)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..675
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14131tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>675
                     /note="ultra-conserved element locus uce-2845"
BASE COUNT          217 a          116 c          132 g          210 t
ORIGIN      
        1 aaaatatctt cctgaatgtt taattaatga cattgccagt tcttttgcca ataacaaatg
       61 gatgtctatg gcagttattt ctcattttaa atacctaatc tgatattata tttcatctca
      121 aagaactaaa tgagaaaaga tgctataatc taatcatacc acgatccagg tgacatctgt
      181 actaggcaga atactgttgt tattctgctg tctagttgct gttgctgaga atgatgaagt
      241 agcgaaatta cattttccca ttattatttc cagacactct ctggcaatgg tttgttgact
      301 ctaataaagc ttcagacaaa gctgtcagca gaggaaatgg cagaagggga gcaagaaaca
      361 gccttcacag caatacatga atctaaagtc tctgtgatag gttgtgcatt ttctgataaa
      421 atttaattgt gtttcagaat atatcacaaa gctgcagctg aattctagag ggataaatgt
      481 attctatcaa gtcaggttgc ttaagacatt gacaaacata aacatattac aagggattaa
      541 agagccagaa gccttacctg ctatagtatt gagaaacatc aagtattcaa agttggatat
      601 ctcccgtctc tgccagcgct gagtcatgtt ggaggattta taaagttgtc ggggtgtggc
      661 cagagagatt ctcct
//
LOCUS       KCPA01000130             580 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 14232tic ultra-conserved element locus
            uce-6505, sequence.
ACCESSION   KCPA01000130
VERSION     KCPA01000130.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 580)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 580)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14232tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>580
                     /note="ultra-conserved element locus uce-6505"
BASE COUNT          191 a          119 c          122 g          148 t
ORIGIN      
        1 cccaaaacaa aggacgtgtg agggctttca tttattttga taatcctcct cctgctccac
       61 agcgttttgc tgtctttgtc aaagtgaatg acaacaattt ggccaactct ctctgagctg
      121 cactcaacag tgacaggcaa attatcagag gccctgcact ccttattatc agaggagaag
      181 tcatcaggag gacgtgcgga ggatccctct cccctgtcac tatttgtcag tgggacaagg
      241 gccactgcta tgggtagctg acaggtaatt tcaacaataa caattactcc tattactggt
      301 gtcataaaca attcgcccaa ggcatgacaa tagcaaagct ttataattca atgccatata
      361 aataaatgcc agtaggtaac aagtaattta gctccaatca ggccttggcc ctggcattaa
      421 tattgttatt gcaagaaaat ggaaaattga aaaaattcaa tatgttaatg aattaagagg
      481 ggttcaaagg ctaagggagg ggaggcgtga tccagaatag aaaacaaaaa caaaaggtac
      541 aaaatcatgc tttcggaacc agcacaaatg tgttcgtaca
//
LOCUS       KCPA01000131             752 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 14340tic ultra-conserved element locus
            uce-5478, sequence.
ACCESSION   KCPA01000131
VERSION     KCPA01000131.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 752)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 752)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..752
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14340tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>752
                     /note="ultra-conserved element locus uce-5478"
BASE COUNT          185 a          173 c          120 g          274 t
ORIGIN      
        1 aagtgctcct ctgtattcag atgaatcaca ttgcaaagaa ctgttgtcat aaacatgcac
       61 ctagtcaaat aaaatcactt gtattacttc tttatgtcag cagataaata ccactgctac
      121 acaggtatac ttgggactgt agctgagtct gtccaaatgc catttcctga gaactcatct
      181 cagagcactt agggacagca agtcctgtct tttggcctgg tgctccaagt ctcttgcata
      241 tgcagctgct gtacttgatt tcttctcctg ctaacgattt tctttaatgt gatccatgtc
      301 ctgtgtcatt ttttctagtt catcatcacg ggagtaaaat gttacgttcg gaatcaaact
      361 cttcaattac cactcagcct actataggtt ggcaaacccc tctctttgtc tccttctcct
      421 cttcttctct tcatttcctt cctgactttt tactatatgc ttcacccatc atatttagct
      481 taacatgttc ctacatgggc tggtgctttg cgagctaatt tttttgacac gcttgaagag
      541 tgtttcaaaa acaattgtca ttcacactga cacagttaaa tgctaacatg tcttgcattt
      601 attcatgcag aacattctct catatgtgtg tttgtatgtg tgtgtgctta gccaccaatc
      661 acttcatcat agtttgggtt tcatgttcat cattgcatgt tgccaaacta cataacttca
      721 tagttttgaa taaatatatt tgctgctttc ct
//
LOCUS       KCPA01000132             828 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 14449tic ultra-conserved element locus
            uce-6802, sequence.
ACCESSION   KCPA01000132
VERSION     KCPA01000132.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 828)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 828)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..828
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14449tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>828
                     /note="ultra-conserved element locus uce-6802"
BASE COUNT          242 a          165 c          201 g          220 t
ORIGIN      
        1 tgtttttgaa agcctcagtg cccaccccag attaaagcag catgttgctg gaatacaggg
       61 cctccaatga agatgccttt caacaacgcg aaaccactaa tgagaaaaca tagacagaag
      121 gagagccagc ccctgatggc agcatttctc agctttgagt agcttccagg gccatcgatg
      181 gcaatggcct gatggagcag cgggtcagag gaaaacgaaa tctcttggtg gctctgacat
      241 ttgtctgcat ttgggaaaca aaaggaaaga aggaaagaga agagatccta gttggccaca
      301 taccatatgt gcagatagtg tattgcagtt ttctaggcta gggagacctc gtcttccaag
      361 tgttccagta attaacctta ctttcttggc tggtgttaat ttgttccaag tatttgggct
      421 ttagatctaa ccatgggaat ctcattccct gcagaagcct tgccaactat tactagacat
      481 tttaccacac acattcaggc caaaaaaagc aaggctaatt acaccgattt ttgcagagtg
      541 aagtgtattt gttataagtt caacgtctcc taataaagga gaggagtggg agaaagtaag
      601 gcttttaatg tttgccaatg ggaggcaggg aggaatgtgg atctgccttt tgctgtgcgg
      661 tacctgcaca aatccccagt gatgctttag gagccaaggt gtgacgatcc gcactgtgaa
      721 accagagagt gctaccagga ttttcagctg taaatagcct agttcaatta tttgatacca
      781 atgggagttc tctaagtttt aaatagggga attattcaaa ccagatgt
//
LOCUS       KCPA01000133             668 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 14555tic ultra-conserved element locus
            uce-388, sequence.
ACCESSION   KCPA01000133
VERSION     KCPA01000133.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 668)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 668)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14555tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>668
                     /note="ultra-conserved element locus uce-388"
BASE COUNT          197 a          102 c          157 g          212 t
ORIGIN      
        1 acaactgcag tattggtatt aagtagaatt taccagttct tgtcagtcct tgatcactcc
       61 tgtaatgagg gggatatagc tggagataac agtgaaaagt tataatacgc agggctttgt
      121 tatttctttg gtggggactg aaggaagcaa gtgcgtgttt gggtttaagc agtctaattg
      181 tgccatggta ttaagtcagt actttaaatt ttcatatgaa agtatgagct ttggtatgac
      241 agaatatcaa agtgaaaatt aatgtccgcc acttgtatat tgcctagacg ttactttaga
      301 gagaaaacaa caggagcgag acgaagccat acatatgtta aattcacatc agtaataaag
      361 attaagtaga agttaatagc atcccagtca tgcttgtgga ggtaatctcc tttctgaaaa
      421 ttcaaaatta gatttggagg atcgaagcaa acagggggtg agactttggc gtaatatttt
      481 aatcaaattg tcatgaatga gtggatacaa ttaagaattc tgtcagtcac agtgctgagc
      541 cccttttgtt agtcagctgt tgtgagggat gcactagggc atcgtgggta gagattaaac
      601 ttgacctttc ccaggatctt catttttgac cctctggcta ggctttgctt gtcagatggc
      661 tatttttt
//
LOCUS       KCPA01000134             615 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 14665tic ultra-conserved element locus
            uce-4653, sequence.
ACCESSION   KCPA01000134
VERSION     KCPA01000134.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 615)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 615)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14665tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>615
                     /note="ultra-conserved element locus uce-4653"
BASE COUNT          183 a          186 c           89 g          157 t
ORIGIN      
        1 ttacctgaca cactttcccc atcagaacag caaatggctc atatccatct ctgcccctca
       61 gcaaaacatg caaatgacca caaatcaact tccaactaat aaaatccgtc tggactcaac
      121 acatgtccct gtatcaccac aatggaagca gccacaatgc cagaaaagcc ctataaataa
      181 tgacagctct gctttccttc tgcatctccc tgcatacaaa atcagaatga aaacaactgt
      241 cctctcctca ccgcctctcc ctctttgcaa tacatacaat ataaggtgat aaggaaaatg
      301 cagggcttac acagatatca gaattcttca gacgtcctcc tttggctctt ttcagaagcc
      361 tgatccaggt ggccttcatt agccagacag ctcagttact gtccgcagct gcagcgcccg
      421 gcactgatct cataaaacat gtgcacactg agcactgcag aatcacagct cctttcctat
      481 ccatgctctg ctgtgagagc cttccttctc tttttcaagc ttccagcctc actgtttcca
      541 agtattctac tgcaattaaa ttctcaaatt ttctcatgcc agtaggaaaa aaaatccaca
      601 ccacaacttc aacga
//
LOCUS       KCPA01000135             487 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 14767tic ultra-conserved element locus
            uce-4096, sequence.
ACCESSION   KCPA01000135
VERSION     KCPA01000135.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 487)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 487)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14767tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>487
                     /note="ultra-conserved element locus uce-4096"
BASE COUNT          140 a           82 c           85 g          180 t
ORIGIN      
        1 tccatagtgc aactctttca gcactctgac catttaataa gtgtctccag acttttcaga
       61 ggtcatttca acagcagaca gcttataaca aaaccattag cagtttggct agcttaagga
      121 aacctcttac tttccttttt tgtttattat cactgcatga atctgcagca tatgagagtt
      181 tataatttct caggcttgtt aaattcatgt taaaggtctg ttttcttgtt gaataaattt
      241 tgttcatata atgctgccta tttcatatac tgagtcttta atagcacctt tggtctatgc
      301 gcaactcaca gatcaaaaca gaggactaaa ataggggttg atgatgctat ttacatgtgt
      361 gattcctgct gtcttcttgt tagtagcttt aatataatag aagaccttgt ctgttttgta
      421 attaacacat ctttactgga gagatatttg gaagtgattg ctgtgaatat actggttagt
      481 aaaataa
//
LOCUS       KCPA01000136             878 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 14880tic ultra-conserved element locus
            uce-708, sequence.
ACCESSION   KCPA01000136
VERSION     KCPA01000136.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 878)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 878)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..878
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14880tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>878
                     /note="ultra-conserved element locus uce-708"
BASE COUNT          266 a          169 c          159 g          284 t
ORIGIN      
        1 ttgggattac cggggacttc aatcaacatt tttggccttt gtaaaggatc ttagccaaac
       61 atttggtgta gttaagctcc aactgatgcc acaacacacg gaaaaaagtg cagaactgat
      121 gcattgtgcc atctctggca gcattcattc agcgtttgct gcgattgggg aggaagaaag
      181 atacagaatg cacggattga ttttcaaatt acctcaatat tttgaaaaca ttttcacctg
      241 catgctgaga atgctaagaa taggcaggaa ggcaattgtg catttgcaca gcctccactg
      301 cattcattta taaattacct catcactgac tgaaattaac actgattctt acaggcaatt
      361 tctcaatttc caatgctaat tacatttttt ttacttttaa attctgtacc acctgttttg
      421 ggcaagacat cttaggcagc gcgaccgcat ttaatcacaa ttttaattaa ccgccctgta
      481 gatgtgaaaa agaagcaatt ataatataga tgaatgatga tttttctgca ttaaattgtt
      541 ttgtttccct ggtatgttga ttgtaacaca gcacacaaat acagtaactg tacaattttt
      601 ttctattgta atttagtaat tgtttttgga aaaccagttt gggaatgagt gacttcatct
      661 gtttacaaat tgattgatac tgttaactca ctgattgctg cagcatacat tttgtattgc
      721 acagcctagc ataaaatata attaggcatg cacagacttt gcagcaccat tttggaatct
      781 gaaaatcaac tgtaaccgaa gtgtgttttc cttgagcatc ctcgtatcag ccgcggctga
      841 tgatacgata atcaacaaac aatgggcttt tcccatcc
//
LOCUS       KCPA01000137             578 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 14989tic ultra-conserved element locus
            uce-4763, sequence.
ACCESSION   KCPA01000137
VERSION     KCPA01000137.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 578)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 578)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14989tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>578
                     /note="ultra-conserved element locus uce-4763"
BASE COUNT          210 a           92 c           92 g          184 t
ORIGIN      
        1 gttattttgc tactgtatca cttaaagctt agtaaggcaa ggatccaagc ctcctattac
       61 tcatcaagca aagtacttgt ctttgtaggc atcaaaataa caaaactatc aagttcaagt
      121 agactataat atctcataca gactaagtta aagcctttaa attgattata atgtctctgt
      181 gatatatata tatatgtata taaaataata caataatttg caagtttgtc aggcaatgaa
      241 aggtagtata ttttgacaca ctaatccagt aagtaatcag ttttctaata aacaatcagc
      301 agtgcactaa tgtgtcatca gcacttcagg agctctggag agtggatgat ctgcacatag
      361 acattaatga ataccccaaa aatcattaag taatcaatac ttctgagtta ttttcattga
      421 gctgataggt ctgatacatt aaagctgaca ttttacattt gtcaagatca cagtgcagtt
      481 tttaacactg gcatatgttg ctaaaaatat tccagaaaga caatcaagga aatacaactt
      541 aaaagtgttg acattttaga ttggtacagt aacttgga
//
LOCUS       KCPA01000138             592 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 15100tic ultra-conserved element locus
            uce-3061, sequence.
ACCESSION   KCPA01000138
VERSION     KCPA01000138.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 592)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 592)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..592
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15100tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>592
                     /note="ultra-conserved element locus uce-3061"
BASE COUNT          172 a          118 c          124 g          178 t
ORIGIN      
        1 gacattaaca agatgactaa cgcttccttt agtggccagc ttctaaccct gtgccagcca
       61 agccctggtg taacactcaa aatagcctta tgggttatcc ggagaaatgg caggttgcat
      121 cttcaccctg gaaggagctc agagtaaaag tatcaagagt tgcccaagtg ggcttgagcc
      181 tatcttactc tcctgtattt tgttctcttc caccagctga tctacatgat ggctactaca
      241 tataactatg ctgttttgaa gtttaagagt cgggaagatt gctgcactaa attctaaatt
      301 gtataagccc agtaaaaagc tgcattgcgt agcttgaaat accactgaca ccctagacta
      361 aaagtctagc tttctgaatt ttgttacagt aattgtaaat agcttcagta agcatcgttt
      421 agcttatcag attaatgaaa tgatatgaac tatgatgtgg atgagatctg gctacatgtt
      481 gagaggattc agttactgta gggcttctga aaaggggttt tcatttcagg tctccacttg
      541 atttctaaca gtcatctcaa acaaatactg gaacagttca gggtcagatg ca
//
LOCUS       KCPA01000139             438 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 15208tic ultra-conserved element locus
            uce-4410, sequence.
ACCESSION   KCPA01000139
VERSION     KCPA01000139.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 438)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 438)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15208tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>438
                     /note="ultra-conserved element locus uce-4410"
BASE COUNT          126 a           81 c           88 g          143 t
ORIGIN      
        1 ctcaacggtg cagaggcttt cgtagagtct tttgaacagt atgctttggt aaaatacaca
       61 cacatacaca tacacagaga aaatatcatc ataagcattt ccactgtaat agtaaccttt
      121 ccatagactt tccaacttgt ctggtcttcc ttgaaggtca attgggtttt caactctgtt
      181 atctgctagg tgtttgatgg agtggtccag ataacagaga agagagcaaa ggaaaagaat
      241 tttttgaaga tcaaaagtgt ccgttcattt tgttatctga ccctatctgt tggcatagta
      301 acaggtttcc tttaaactct gccatcagat gatttgtctc tatctgctat gaattctact
      361 ttgactgagt agctgctggt aaggtataaa gcgcgtacag tgttttccag tttcctactg
      421 caatattagg aagtgaaa
//
LOCUS       KCPA01000140             753 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 15315tic ultra-conserved element locus
            uce-2476, sequence.
ACCESSION   KCPA01000140
VERSION     KCPA01000140.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 753)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 753)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..753
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15315tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>753
                     /note="ultra-conserved element locus uce-2476"
BASE COUNT          234 a          156 c          129 g          234 t
ORIGIN      
        1 gaaaggaata ctgtttggaa atcatgtggg tactaaacta ttggaataac aatgttgttt
       61 aaatacaagt tgccctaaga aaatgggaaa taagagttct aacttccact tctgacccca
      121 atatttcttc atcttcattg actgtgttta acaacaatac tgagaatcag attgttgagc
      181 aaagctattc agtggtcaaa tgtatgttgt cagagagttc atgaaaaagt cattagctct
      241 cctcccctcc tctttcactg tcaagcagaa tcatgtcata aatacagcca cttgtctagc
      301 aggatatcaa tctatccagg tatcacccac ttcctgtctc tggccatatg tttctgttat
      361 ttatgtcaag aaaatagcat ttacacaacc gctgctagtt gtttacagaa gtttaactcc
      421 tgtgatatag tcccgcttgt gttgcatgct tttagcccat agataataca tgagactgta
      481 cattttaaaa tatgctacca catgcatgat agaataaaca cagacctgaa ctgacagcac
      541 catctgccaa atacagttga tgtcagggga ctggtctctg cacaatattc cactgctccc
      601 ccatgagata aggctactca tggtataact acactaaatt tgacttgttc atttagtact
      661 caaattgtta aaattctcag aagcagaagg gactcaggcc tcctaagaag agtgtaaatt
      721 gaacaattct cacataggtt tttcttgttc tta
//
LOCUS       KCPA01000141             786 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 15426tic ultra-conserved element locus
            uce-1804, sequence.
ACCESSION   KCPA01000141
VERSION     KCPA01000141.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 786)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 786)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..786
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15426tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>786
                     /note="ultra-conserved element locus uce-1804"
BASE COUNT          221 a          163 c          164 g          238 t
ORIGIN      
        1 gtgatgctct ccagccacac ctgagctgga gcagctccaa cccaggcccc accgggcaca
       61 ggctgccctt gtcctctgcc accaggcaca ttcccagagc cacatattta tttaatgcta
      121 atgcctcgtc ttggcattca tcatgtgcta agctgggaaa gtaattaaag ttaatttctg
      181 cgtgggggag gatgaggaaa gccctcactg taaattctta ttcatatttc tttcctgttt
      241 tgtgattctc aatcggagtt ttctaataac agataatttc tttttgtcta actttaatct
      301 ggccctgctt gacaagcacc atccttttca ttgaagggta agaccactta aagaaaggcc
      361 aataagccct tgcactgctc agctgactgg ggtgatttgt caccctgtgc agtggtggtc
      421 acaccaatgg atttatctca aggtaaatgg agatgctgag acctgggacc tggagctttg
      481 attaaggccc cctttttgta gtgttgatag atgttgcttg tgtttatcta tttgaaatgc
      541 cactaaatct gtgaatacaa tggaaaaaga gagtagtttg cagctgaaaa catattagtg
      601 atttatgttt cactaagaag cacaatagag agacagaggc tattaagagg agctattttc
      661 atgagaaata attctgcttt aaaacattat caaccacacc ttgataaaga cctacatgca
      721 tgcataatgg tgtttacttt agttgagtgc aatatacatt tggaatgcac agccccaaat
      781 tattaa
//
LOCUS       KCPA01000142             372 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 15528tic ultra-conserved element locus
            uce-2678, sequence.
ACCESSION   KCPA01000142
VERSION     KCPA01000142.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 372)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 372)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15528tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>372
                     /note="ultra-conserved element locus uce-2678"
BASE COUNT          132 a           39 c           79 g          122 t
ORIGIN      
        1 taatgtaaaa ttaattcctt ttaaaagaaa aaaaccacaa catttttcta atgtgcatta
       61 agaatgttgg agagctcact gaagcatata tgttgagctt tcaggagcaa tctgtagtca
      121 ggcattttaa atgaaaattg atttgtgatt tacatggtca gtggaaagaa aattaactta
      181 tggaaggttg taatgaaata ttagacaagt aaaaaagtag atggtgatct agtggaacta
      241 aaagtctcat ctggaagaat tctgtgacat ttttttctgc atgagttgta atgttagtgg
      301 taattttatg ggactgaact gaaatgaaaa gggtgttatc acagattgcc tacaatatag
      361 gattgtgttc ag
//
LOCUS       KCPA01000143             524 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 15635tic ultra-conserved element locus
            uce-5788, sequence.
ACCESSION   KCPA01000143
VERSION     KCPA01000143.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 524)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 524)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15635tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>524
                     /note="ultra-conserved element locus uce-5788"
BASE COUNT          183 a           75 c           90 g          176 t
ORIGIN      
        1 cttaatgtcc tcaatattct gtaactcatt tttggctcaa tacataaacc tgattaagtt
       61 atcttgacag aaatattttt atgatagcaa acaaacttag cagtaagcat ttgacagcat
      121 tatttattaa tatgataaat gaattgtgag atgtgtgatt gtgtgatgat gcattcattt
      181 agttttccct ttttttcttt tactaatctc tgtcatgttg gatttataaa tggaactgag
      241 tgacctttga aactgtgatg gaaatgaaga gataaacaca acttgaaagg acaaaccaat
      301 taatataaat gtgttacaca taaagaactg atttcaatca attgctatct gtgtaaacct
      361 ttgggcactt agctgaatga aatagagcaa acagattacg tgacataggg acaaaacatt
      421 cttttattat gtagttggta tatcatccac aacaggaaga agaagtgtat gctacattgt
      481 ggtacaaagt ccattgagaa gttacaatcc tctgataatc agaa
//
LOCUS       KCPA01000144             551 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 15741tic ultra-conserved element locus
            uce-5008, sequence.
ACCESSION   KCPA01000144
VERSION     KCPA01000144.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 551)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 551)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15741tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>551
                     /note="ultra-conserved element locus uce-5008"
BASE COUNT          151 a          162 c          107 g          131 t
ORIGIN      
        1 ctgtgagtac acagcaagat agacctctgc accaagggtt ttgtcccttt gtgcttgctc
       61 ctggggaccc tatctggcag agcaaagtcc actgccctcc ctcttgtcac ctttcctttc
      121 ctcaccagca acccccagcc cgacagagag accaggctgg atggagagcc tttctctcca
      181 gcgtgccgca ctatgacaga tgattgactc gaaacaatat ctaaggcgat caggataaag
      241 taccgaccat ttcaaggctc agcagaattc aaattctaat tagacttctc accacattcc
      301 aaataaaaat tgttcccctg atatcctttt tgcctatcag gtgtctctcc ctgatcgctg
      361 gaacaaaacg cataaagaaa gtgattaaag ccataacaaa ggcataaaat tgaaattatc
      421 gctggtatca catctgggag cagagtgtgt caccacactg cccccctccc ctcggagcac
      481 tccctcccca aatagacaca cacatccccc catagttctt gcctcaaatg tgagtgatag
      541 gctgggggac a
//
LOCUS       KCPA01000145             532 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 15851tic ultra-conserved element locus
            uce-2754, sequence.
ACCESSION   KCPA01000145
VERSION     KCPA01000145.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 532)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 532)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15851tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>532
                     /note="ultra-conserved element locus uce-2754"
BASE COUNT          191 a           85 c           95 g          161 t
ORIGIN      
        1 atgaacatcc tacctcctgg aaagttgcag gttaaaatgc atgtaagcaa atacagtgga
       61 aaagtaaata aaaaataaat caaaagagca gtataagaca gcattcaact ctttgcctct
      121 tgaaaattta aatgaatact ccttgagagc aaactacaaa atgctaacct tgaagtgttg
      181 agtggcagaa agaattatgg gttattgtac tgtcaaaatg ccagacagct gtatgttgag
      241 ttaccgtgtt atttagacaa tcagaaactt ggaagctaat gtgacatatt tttttcagtg
      301 tgaaagctcc tgacatgcgt catgataatt tctaaaggga caaaatgtta tataaaaaac
      361 acagtgcctt tatgaaactg cctaacaggt acaacactgt tgcaagtaga attcacgctg
      421 aatagtatag ataagcagga ttgattcagg acattactaa aattgctatt acatcattct
      481 gttgttcatt tgttctatac attttatcac tgtcatactt gaagatactc tt
//
LOCUS       KCPA01000146             498 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 15960tic ultra-conserved element locus
            uce-3130, sequence.
ACCESSION   KCPA01000146
VERSION     KCPA01000146.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 498)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 498)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15960tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>498
                     /note="ultra-conserved element locus uce-3130"
BASE COUNT          138 a          108 c          116 g          136 t
ORIGIN      
        1 ctgatgctgc tgaggtgcca gaggccagga agagatttcc tctcttcttg ttttccgtgc
       61 tgcagtactc cccagaggct gcttgtcgcc atctccaaga agaggagggg ggagggcagg
      121 aaggatgagg gaacaagaca tacctgcagc agtccttgct gtatattccc tctgtgtccc
      181 accgacagtg tcatgcagaa ggaaaattgt tctatcagtg actgtgttag attcatgacc
      241 ccaccacaac cttgaattgg cctttagttg tcgctgatgg gaactgaaga acagctcctg
      301 tcgacatgat tgctgctctc caatgaatca gaacacacag ggcacagagc agcacattaa
      361 actagcaaca gaaatatatc actgtacttt tatatagatg tattgctttt gcccaggcat
      421 ataaatgatt gggctatcca cttatttttt ttccaaggac tataaattaa aaataagcta
      481 agggtttgga aattatgt
//
LOCUS       KCPA01000147             502 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 16168tic ultra-conserved element locus
            uce-4694, sequence.
ACCESSION   KCPA01000147
VERSION     KCPA01000147.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 502)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 502)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16168tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>502
                     /note="ultra-conserved element locus uce-4694"
BASE COUNT          154 a           85 c          107 g          156 t
ORIGIN      
        1 tgacatttgg attttgagag attaaaaaca tgggaaacaa tgaaaggatg agttaattaa
       61 tgtttcttca gcctatccaa ggtacactgt tgtgattaat ttatgcctgt tgttttatca
      121 cctattactg acttgtaggc ttctgtttgc actggctgta acaagcattt cattttataa
      181 aaaatggttt cggtttcagt tactttttta ctatacccga aaaagagaat gggatttgca
      241 aatgataaat ggggaagttg actagctaac taataaagat ttgtcttaat caagtatgat
      301 ttgtcagaac aggagcgcac tggggtcagg gcacatgcaa tgaataatac agcattcact
      361 ggagagaagg accaggcaaa aggcctcata aatatgctgc gattacccac tgctaattcg
      421 tattcaaatg cacagcaacc agctccgagg ttgctgagct gttcacctgc ttcgtgggct
      481 ttaccatgtt taagaaagtt ta
//
LOCUS       KCPA01000148             823 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 16277tic ultra-conserved element locus
            uce-1339, sequence.
ACCESSION   KCPA01000148
VERSION     KCPA01000148.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 823)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 823)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..823
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16277tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>823
                     /note="ultra-conserved element locus uce-1339"
BASE COUNT          232 a          140 c          163 g          288 t
ORIGIN      
        1 gtatggctgt ctcagcacaa tactcaacat aactgcagaa ctgatgtggc tcaggcatcc
       61 tggttttaat tccttgagga tctggcaatt ggctcatgcg aagggtcacc atttgaggtc
      121 ctgccttact aattatgtgc tgcccaacaa ctaaatttgt aattgttttt ctttagtttg
      181 agcagggtct gaatttttgg ttttgttttc ttttttgcca gcagacaagc ttgggtctgt
      241 aaagacaagc gagtacactg acaaaagttt accacttagt tttccaaaat gtaaaaacga
      301 aaaaagacaa aaaattagac aacaaaattt gcattgttca ttgtagcact attggtaata
      361 aaaaatgttt gtgcattttt atgtgaagat ccttctcgta tttcatttgg aaagatgagc
      421 aaggtttgct tccttcattt tacttcccct tctgtctttg aaaggcagtt ttcgccaagc
      481 ttaatgcaag aatatctgac tgtttagaag aaagatattg ccacagtctc tggttagttt
      541 ccagagttgt gtattactga gcttcatctt tccagaatga gcaaaacact gtccagtctt
      601 tgttacaatt ttgtaataaa tgtgtacatt ttttttaaat ttttggacat cacatgaata
      661 aaggtatgta tgtacgaatg tgtatatatt atatatatga catctatttt ggaaaatgtt
      721 tgccctgctg tacctcattt ttaggaggtg tgcatggatg caatatatga aaacgggaca
      781 ttctggaact gctggtcagg ggactacttt gtcgccctgt gca
//
LOCUS       KCPA01000149             584 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 16385tic ultra-conserved element locus
            uce-6870, sequence.
ACCESSION   KCPA01000149
VERSION     KCPA01000149.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 584)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 584)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..584
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16385tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>584
                     /note="ultra-conserved element locus uce-6870"
BASE COUNT          187 a           97 c          103 g          197 t
ORIGIN      
        1 ccatgttaat aatacagtaa agaattggaa cttaaatgtt tattattgtc ttatgttcat
       61 attaatctgg tttatgcata gtatccaaca aagtctaata agccagtaaa aaagaaggat
      121 ggataattag tttaaacagg taaatgctaa ttaggaaact cctgaaaggc atccattata
      181 cactagctta aaacaaattt tacagccctg gttagtggtg taatccaaat tctgtcaagg
      241 caactgcatt ttctgtaatt gagatgtgta tgtttgcttt gcataacaga tggctctgta
      301 tgcttagact gatagctagg aaaataataa ttgcattatt ctggccaaaa gaatattagc
      361 tcttgggttt tggccatttc agtcagtcct cctgccagca cagcatatgc acatatatgg
      421 attggatttt caaggaaatt gatgcatctg gaatagtgtg gccatctgaa atatcatctg
      481 ttcaagaaaa atttggcttt aaccctatgt tagtctcttg ttaaaagcat tttctgccac
      541 tgtctttcaa actatagcat tgataaatct ctccttactc tgaa
//
LOCUS       KCPA01000150             482 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 16490tic ultra-conserved element locus
            uce-4512, sequence.
ACCESSION   KCPA01000150
VERSION     KCPA01000150.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 482)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 482)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16490tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>482
                     /note="ultra-conserved element locus uce-4512"
BASE COUNT          132 a          105 c           90 g          155 t
ORIGIN      
        1 atttaatgct actcctgata tcctctttct aggataatcc agcgttcatt ggagtgctta
       61 tcacaacgag tagcagtggc agtatgctgc atcatttggc acactctcag gaaaatggaa
      121 tgttgaagaa ccactaatct gattctccta taccagtact tacttgcctt ccttagtagt
      181 acaggaaaag ataatggttg ctgtaaatct gatctgaaaa ctgcatttca tttttctgct
      241 ttcaagctgc gagctatctg taagaaggta ttacttaatg ctttttaccg tagcatatag
      301 cttacagtgc tgtaagcata cgtagcatat agcacagtca cacttgcttg tataacagga
      361 gctctacaaa cccactgaaa atgcattatt cctagtttag gctgcccacc tctggtttgg
      421 ctgatttgta aacacaaatt ttccccaatt ttcggccgcg tttcctttct gtggcaaaag
      481 ga
//
LOCUS       KCPA01000151             748 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 16602tic ultra-conserved element locus
            uce-1157, sequence.
ACCESSION   KCPA01000151
VERSION     KCPA01000151.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 748)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 748)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..748
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16602tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>748
                     /note="ultra-conserved element locus uce-1157"
BASE COUNT          206 a          130 c          153 g          259 t
ORIGIN      
        1 tttttcttga atttatttag tgcagttcaa attgaaaatg cagagtttac tgcctggttg
       61 gggacgtgga tgctaagtct ttagtttgaa ctatgttgtg agttaagtgg tctctgttta
      121 tcttacttac aagtatcagt ttgctctttt taagcaactc ctggcaaagg aaaggaagga
      181 tataccatgt attttattgc ttaattgttt atagcaactg tatggtctgg ctacagaatc
      241 ctagtaaaat ctaggagcag tggtatggca gaatttctca gtttgaaggg actccatctt
      301 tgacagttct cctaaggtag gttattttgg agaaaacata tgtttccatt ttctctccct
      361 cagcttccct tttagtcccc aggctccact agggtcacag caacattaag gcttttgtca
      421 ctgtgattaa tagctcttta gatcatcttt aattcactca ctaatgactg agggtctttc
      481 tgctctccaa gtaatcgtgt gatgtatgag ccgatagtac accttgtggc agaggtgaaa
      541 atcattcagg caatgcaaat attgtcacgg ggacaaatgt tttccctgtt aataaaaatt
      601 aatgaattct acccaggagc tagttaaaga agctctggtg agagagatcc aaacatcaag
      661 ttcttgctgc ttggaaccat taattcagtc tttctagata tgtgaggata attattatta
      721 gtatttctgc atctacataa tagatgag
//
LOCUS       KCPA01000152             806 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 16714tic ultra-conserved element locus
            uce-2367, sequence.
ACCESSION   KCPA01000152
VERSION     KCPA01000152.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 806)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 806)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..806
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16714tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>806
                     /note="ultra-conserved element locus uce-2367"
BASE COUNT          268 a          142 c          143 g          253 t
ORIGIN      
        1 tgctactaat attgatttgt tatgattaat aaatatgatt ttatgcatta cccatgcatt
       61 ttatctataa taagagcaga agaaaattgc ctcttgcttt ttatttttca ttgactgttt
      121 tagtcaatga taaataaaga actttaacag cagtctgatt acaggaaaga caggacaaaa
      181 cagaaacgta gcagtaatga ataaccatgc tgcaagctac acacgccatt ttaatatttg
      241 taatggtgct aatttccaga aaatatgctt ccacatgagc tctcaaaaga cataaaagct
      301 tggcatgtaa agtaaattgt ttgtcacttg ctgacgacct gccatattta ttgtcaggag
      361 aaatggacat tagttggaaa agcagttgtt aaaggccaaa caatttttaa agatggcaaa
      421 gatgtgcaag ggctttcctt tttctaacaa tgagccaccc cttcagacat caaaagacaa
      481 gataataaga cacttcaagc acaattcaag attatattca acatctaaag gctcatctcc
      541 tgtcagtttg catttactct cccagggatg tgatgcttct atcatcattc tgtcaagagg
      601 agtctggcag aaacgatgag ggcccctcat ttcacacact tttttatcaa atagcccatg
      661 ctcattctca ttcagccaaa atggagggat aatttgaaga aggtcatgca caagtacaaa
      721 aatcttgtgc tgatttgtgt gattagaagg cattaaaatt gcacgtttac gttagttctg
      781 agatgttttg tcagtttatt tagtaa
//
LOCUS       KCPA01000153             568 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 16821tic ultra-conserved element locus
            uce-3246, sequence.
ACCESSION   KCPA01000153
VERSION     KCPA01000153.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 568)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 568)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16821tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>568
                     /note="ultra-conserved element locus uce-3246"
BASE COUNT          186 a           90 c           80 g          212 t
ORIGIN      
        1 agtctttaaa tgtctttctg attgctggct tctattaaaa acttcttaaa ataatagata
       61 ggtttaattc ctcaagccaa agaaaaattg tatcatctta agtattttcc atttttatta
      121 tattgatgag atttggctac cgagaaaacc tcttgtattg caagttttaa atgtaccagg
      181 ctaaggttta cttaattaga acctccaggc aataaaggag cccaaattct gtgaatctta
      241 atatgctaaa taatgcaaag cttcaactct tcaagcatga gacacacatc tggcagctta
      301 acatttaaat taccccactt cagtataatt ttcatgaaga aaagaatggg aaatgtatta
      361 caactaaatt taatttcttt ttagattttt catcctgtct aattgcaggc atttcctctt
      421 ttatttattt attttcatac agatgtactt tttattgatc tttaatttga gcagcttctt
      481 actgttacag ccattgaaga attacattgt gtttttactt agcaaaaatt gttcagagaa
      541 atctatgagg aattaaagta atgagctc
//
LOCUS       KCPA01000154             878 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 16936tic ultra-conserved element locus
            uce-865, sequence.
ACCESSION   KCPA01000154
VERSION     KCPA01000154.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 878)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 878)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..878
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16936tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>878
                     /note="ultra-conserved element locus uce-865"
BASE COUNT          243 a          169 c          172 g          294 t
ORIGIN      
        1 agattgcatg tcagtgcagg tcacagttac aatgcagcag atctcagaaa ggtgtaaggt
       61 ttgataagaa gcgaatcttc tctacttgct gtgtcaaatc accagcagtt tatctaaagg
      121 tctgtgccct tgaagcacaa aaatatattg tttttaaaca taactggaaa tacctttcta
      181 tcaagaaaag ttgtctggct atgtgatttt acatggtgta ttttttccag tcctggagat
      241 aattagcaca agggcgcttt gccaagctaa agctgagaga atatccttca cagcctttct
      301 gggcatttgt gtccttttcc aatttttatg ctgctgtcac tggactctgg catttcttac
      361 ccgattcatt tgctttctct ggtaatcata tgcaatgaag atatgcatgg ccaacattta
      421 aacaggctgc agatcaatta gtggtcttaa gtttatctga tttttatcaa agaagacaga
      481 gctttgggtc gattgtcaga gcctgtgtca agttgacctt ttcagagacg tctacattgc
      541 cagtcccttg ggcaacttgt tgtcccctgt tagtctctga atggcagaag tctgttctgc
      601 tcaagcacaa agtatacaca gatgtctata ttacattctt ataggtttga cagcaactgc
      661 atgttgtatc tataaactgt cctttagcag tgacacttcc tcaatgatga taagctaatt
      721 tatgcaacta aatctccttt gtgcagaaat gaaagctaat tgagtcatta caaagtaatt
      781 caggaaggaa taccttgtat aaattggctt actttataaa tccttctcaa gtggttttca
      841 tgcatcctaa gtggtgctta agcagttttg ctgctatc
//
LOCUS       KCPA01000155             323 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 17039tic ultra-conserved element locus
            uce-204, sequence.
ACCESSION   KCPA01000155
VERSION     KCPA01000155.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 323)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 323)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17039tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>323
                     /note="ultra-conserved element locus uce-204"
BASE COUNT          101 a           86 c           56 g           80 t
ORIGIN      
        1 tcacaggcag aatagcttcc acagcaatgc ctcagcttgg ataggggagt gacattattc
       61 tcgacttctc tgagactttt tccacacctg cccttgaaga gcacctcatc cagtgtctgc
      121 gaggcttctg cttcttgttt gacatccctt atttacaaag caaacaaaat gttcctttta
      181 acacacatca tgcaaagttt attaatgaag aaaacaatcc cagggggtca acccagggga
      241 cccttgaaac ctgccagcaa aaactcttca aacgctcaac gcgacagatc ctccaaaacg
      301 atatttcaca caatgaagta aaa
//
LOCUS       KCPA01000156             647 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 17145tic ultra-conserved element locus
            uce-280, sequence.
ACCESSION   KCPA01000156
VERSION     KCPA01000156.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 647)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 647)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..647
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17145tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>647
                     /note="ultra-conserved element locus uce-280"
BASE COUNT          212 a          109 c          102 g          224 t
ORIGIN      
        1 aaatgtaaag gacagtcatt ttagaaaaca gtaaattcat gtagcatgca ttaagtgcac
       61 gtatttcata agacctaggt taatacaact ggcatctagt ttaattaatc cttgttagtg
      121 taacgactaa tatccctccc tagcatgttt cctttaaaca ttagtatgtt aattaaatgt
      181 tgttttttta agggcctttg tacttcaata tggcattata tcatctaaaa ctattccaaa
      241 caactacctt atagagatgt ctccttacaa tatctggtct cttgcagaaa ttctgaagcc
      301 ttttaaaaag ctgttcaggt gtagaataca gatattcagc tgcaggaaaa acagatacat
      361 ttttaatgaa acaaaaacct caaagcacac actcgatatt agtcacttta ctaattaaaa
      421 atgcatattg ctctgtgccg cctcgtgttt tacattattt aagcatgatt ttataaggtt
      481 acctcagctc acaaggatgt ttaatgctaa ataagactgt gtagttgtgc tgtttagaca
      541 tctcctttgg gtgattaaaa tacattattc taatgtaaca caatgcatat gtgatacatt
      601 tagtgatgag atttttcgaa gaactggtac tacattagtg tgtatcc
//
LOCUS       KCPA01000157             508 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 17250tic ultra-conserved element locus
            uce-7482, sequence.
ACCESSION   KCPA01000157
VERSION     KCPA01000157.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 508)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 508)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17250tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>508
                     /note="ultra-conserved element locus uce-7482"
BASE COUNT          115 a          159 c          142 g           92 t
ORIGIN      
        1 agagctcagc tccttgcagg aagaggtgac gatgcccagg ggacatcctg gcagcaggga
       61 cgtcccgtgg cccagcaggg aaggcagaag agagcaggat ccatcctttc ccccggcagg
      121 agtggcccag aggggagccg gagcccccag cactcccctc cctgcccctc attcccagct
      181 cattaaggct ctcccattat tctgacattt tgtgcgcgtc acgtagcggg aagaagtaat
      241 ttacttagaa gaaattaaaa gttcatttta attgagcgca cactgcagta tgcaaatgcg
      301 ggcgcattat gtacactgat gcggagacaa aggctgtaat caactgttaa ccctttccga
      361 gccagccccg cgctcttccg cagctctggc accgctccgg ccactccgga gacacaccca
      421 catttgggat gtgccgcgtc cccgcagctc cgcgctcccg gagcaggggg caggacaaac
      481 gctccgcggg cagtcagaca gggatgcc
//
LOCUS       KCPA01000158             576 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 17358tic ultra-conserved element locus
            uce-6083, sequence.
ACCESSION   KCPA01000158
VERSION     KCPA01000158.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 576)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 576)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17358tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>576
                     /note="ultra-conserved element locus uce-6083"
BASE COUNT          175 a          119 c          114 g          168 t
ORIGIN      
        1 aatgaaagtt ccttaaatag tgttcacggc tcataattgt tggacattaa agaagcaatg
       61 tattggtaag accgtttgcc cacaggaccc ccattccagt gacagatgcc cctccttcca
      121 cctgcattgc tcaacaaatt tcttctcaag aggggaaatg aattctcaat agcaacatgc
      181 ctagtaatta cccgcactgt aattctgatg tgcagtgctg tcacccacca tcaggtggga
      241 gtggaaaagg cactgtattt tgttgatggt tgaacatttg ttttcctcat cattttgaca
      301 ctagaggtaa ttgccattcc tgaaatattc tctcgctacc attacaaagc aactgttagg
      361 gacaaactaa ttatgaagaa tctcattatg acagactaat agcccaacag aggggattta
      421 agcaaccgaa tagtaaaatc tagcagctca catataactg ctagaaacac atgcttctct
      481 gtaagccaac agattttttc ttagagatgg gagggactag agtgtagaat gggtttccaa
      541 gcttgctttt attgagcttt ttatgtgcca aaatga
//
LOCUS       KCPA01000159             466 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 17457tic ultra-conserved element locus
            uce-2255, sequence.
ACCESSION   KCPA01000159
VERSION     KCPA01000159.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 466)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 466)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17457tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>466
                     /note="ultra-conserved element locus uce-2255"
BASE COUNT          147 a          107 c           90 g          122 t
ORIGIN      
        1 acacatcccc actggctcca taggtcccac ttatgccaca aaaatttgta acatctggca
       61 ttttgccaga tttctacagg gcattagtaa caaactggtg aagctcatta aagagagaaa
      121 cctataacca ttaaaagacc attaagcagc atgtcatttt gtaaagctaa atagcccaca
      181 gtaatcaaaa gcatatgaac cccagctggg ttacccagca aattgtttca atttagggag
      241 aattcatcaa gaaagattgc tcctaggatt gggttgactc ctttagttgt tggctccatg
      301 tcccattgta aattacggtg attgatgcac cttgcagata aaagtgaaga gtgaccagaa
      361 tagccagaac atctgctcag aggcagcgct aatgcgaacc tctgcagaaa gttgtcactt
      421 atgcccattg ctgccagcca gctacaaagc aacttctttg ccattt
//
LOCUS       KCPA01000160             659 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 17571tic ultra-conserved element locus
            uce-2896, sequence.
ACCESSION   KCPA01000160
VERSION     KCPA01000160.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 659)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 659)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..659
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17571tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>659
                     /note="ultra-conserved element locus uce-2896"
BASE COUNT          137 a          189 c          155 g          178 t
ORIGIN      
        1 agaggtccca acagggcttg ctaaggagac cccagtggat tgtccagtct caaggacgga
       61 ttgccagaat gagccagggg tcactagtct aaaactgagg gaggtgtcag agggccagca
      121 cctaaggtct cctgagagca cactgcccag gggcagggag cggatcaccg gcatcgcctg
      181 tgtgctagac agccaacctg gactttgccc actagacccc atcaggccga ggtctcctac
      241 atctgtaact gcctcggcac aggtctcagg tgtgcatgga tacccatctc ttatcttccc
      301 ccttctgtct cctgtctttg tgaaccgcct cacgatccca tcacatttct ttacgtccag
      361 cttctggcct gtctcgtcct gtctgcacct gtctcgttcc ataaaccatc ctctcaatgg
      421 tgagacactt cttcaatctt tttctcagtc ttttttccat ttcctctggg tcttatgtct
      481 gacagtcctt ccttgtagac ctcagaactg ttgtgatttt agtgatttag gggctcaaac
      541 ctcagtgcta aaagctgata tgctgtgtag gtcacaccct cctcttggaa catgtttcca
      601 gcgaatgaag gtgcaggcca acatgtgcta ccaggcagct cgtccagaag ggtttgcat
//
LOCUS       KCPA01000161             660 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 17680tic ultra-conserved element locus
            uce-8011, sequence.
ACCESSION   KCPA01000161
VERSION     KCPA01000161.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 660)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 660)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17680tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>660
                     /note="ultra-conserved element locus uce-8011"
BASE COUNT          204 a          138 c          124 g          194 t
ORIGIN      
        1 aaaaagtact ggttaagtat ttcatacaca cctaatgttc tgtgttgtga acaaggtgga
       61 aagaagacac ttgcacttaa atcttgaagc atcccgtccc gatgaaccca gagaaactaa
      121 tttctgccat cagaaaagta ctccaccaga acaccaaata attatatgtg ctgctgaaaa
      181 ggaaacagca agcccagttc tggctgtatg tagtctctcg aggtacaata atataaacct
      241 gatcaattgc aattaaaatc tgaacagagg cttagaactt gaagtcttgg tgcattagtt
      301 cttgccaaaa gcagatgtga ttgtgagctg gaagcaattt ctcctggtaa tttgtgatga
      361 cactgggtag agcagcccca gagtccccaa agacaaactc atcagaggct ctaatgtatg
      421 catgacacat gaggtggctc ttttagagct caattaattg ggctgaacat taagacagca
      481 agttcaggac tttttttttc ccctccagag ttgcttttcc tctttttaca agcagttttt
      541 tcccttacct tctgcaagcc atgtctcctg taattggctc agatcttgaa agagttctgc
      601 aaaaagaaaa gacttacacc tttaatctct ttattaaaca tgtccttttc tttaagaaca
//
LOCUS       KCPA01000162             585 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 17778tic ultra-conserved element locus
            uce-2596, sequence.
ACCESSION   KCPA01000162
VERSION     KCPA01000162.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 585)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 585)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17778tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>585
                     /note="ultra-conserved element locus uce-2596"
BASE COUNT          192 a          135 c          146 g          112 t
ORIGIN      
        1 actctttgag tctatgtata gccagcaaac tctaaaaatc cccatggcta acaccattag
       61 gaagaacaac acatttattg ctgctctgtc agggtgatcc acacattttg aagaaaagtg
      121 cttacagtgg tagagtggga gagaagggga aaggaaggga aacaagaact gaatccaagg
      181 tggaggcaag cagcagtaca acagacagct ggtgtttggg tggtggtaaa tcaccctgaa
      241 atgagcctct tccctcagct caatgaggcc taaacaacaa aggaaggcac agcttgcagc
      301 cggacagcct gctagccaac cacagacaca catgacagct tcattcagga gcccggagtc
      361 aatacaaaag ctccgaaatc aatccgacat cctgcgacct caaacaatgc gccaaatctt
      421 ctcagaattg gagccccaaa tgagggggag cagcattcaa gggagatcaa aacgcagggc
      481 tggcattgaa agagactaaa aaggagaaga atgttcccag tttattaatg gtgaggtctg
      541 gccggctgca tcccagccac cataggttac gttcattaaa gggca
//
LOCUS       KCPA01000163             575 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 17885tic ultra-conserved element locus
            uce-3887, sequence.
ACCESSION   KCPA01000163
VERSION     KCPA01000163.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 575)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 575)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17885tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>575
                     /note="ultra-conserved element locus uce-3887"
BASE COUNT          175 a          105 c          116 g          179 t
ORIGIN      
        1 aactacagtt tgcatgtaaa tggattcaac tcatctttgt ttaacgttgc cttttatgtc
       61 gagtttcatg aattgctaag cctgacaagg ttcactggga gtcttttaac tcccacccac
      121 aagctctccc tggctgtcat gtgactggca gtatagaggg atcagcaatg gcatttatgg
      181 ggaaagcggg aagacaggtg tcagaacggt ccagcaggca aaccgaacga acactaatca
      241 gctctggtgt tcttttacaa tccatatcta attcacaagt ttcattcttt ctgaaaaaca
      301 attactaggt tttgaagttc attgtgcatt tactcaactg tctcttcaca ttaacgtaag
      361 tgggaacaag agagtcagca ggcaagggac tcttagagaa gatgaaggct ttattttaaa
      421 gtaatataat tacagatgag cataatgttt tacaataaat ttaaatgtat agttacatcc
      481 ttatgtgcta ggaaaatatt tgttggttgt ctctcgagct gaaactccgg tatatacaag
      541 ttattttgct gagagaatct cattgcaaca tcaaa
//
LOCUS       KCPA01000164             558 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 17993tic ultra-conserved element locus
            uce-4538, sequence.
ACCESSION   KCPA01000164
VERSION     KCPA01000164.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 558)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 558)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17993tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>558
                     /note="ultra-conserved element locus uce-4538"
BASE COUNT          180 a          103 c          110 g          165 t
ORIGIN      
        1 aggaatgact agtgataaga ctggaccact gtctttaagt ttgaaaactc tttagtttgc
       61 aaataaaaca gaaagtattg ctgataaagc atgcacaatt tagaagctct atgacaagca
      121 agaagtcagc ttacactgga aactctgaag acagtcaatt taaaggacaa aaaggttgtt
      181 gggcacagtt tttttctttt actgcataca gttccctgct atctaaaatt gtgatttatg
      241 cagtatttta atattttgct tattctttcc ccttgggtgc tctctgggca gcgataaaaa
      301 ggcgacgctg aaagagcacc attaatttgc tctgatgact ggccagataa ggggagataa
      361 tgggaaagat aagcggagaa gatataccat cagaaacccg attattacca ttaaaattcc
      421 agcccagcaa tctgcagaag cctgataatt ccttctccgt ttccaccact ttggatgata
      481 aggcaaaaaa tagtcactca gtgctccttg attagactgc ctggatttcc tgataataca
      541 gtgataaatt atgtattt
//
LOCUS       KCPA01000165             722 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 18102tic ultra-conserved element locus
            uce-1915, sequence.
ACCESSION   KCPA01000165
VERSION     KCPA01000165.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 722)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 722)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..722
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18102tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>722
                     /note="ultra-conserved element locus uce-1915"
BASE COUNT          199 a          143 c          167 g          213 t
ORIGIN      
        1 tgtagcagca caggataaca gggaattgtc atagcaggac cagacagccc ataattaatt
       61 ctgcctgttt ataaatatac atatttatat tgctgatgta tgttccctgc acttgatgta
      121 tgtaagcctg cggggcaggg taggggagat accaaggcct taatttggca accatcagtg
      181 tgcctgccca tcagacattt ttaattctat gattcagtgt agccgacgag ttgatttcca
      241 gtgctcctca caggaatagc tcaggccaag tacaagttga ataaccttca ggaaagctgt
      301 gctgtccttc tgtcggccgc tgtctttgaa aattgcctgc agagttagtg agcaggaaca
      361 gttaagattt acaaacaatg atgaagcttg tcatgcatct ttcaccattc atcatctggg
      421 tgccgtggct gggcggtgaa gtgttcttca taaaaaccag ctcagtgtga aatacacctc
      481 gcagcaatgt ttactgctct gaaactcgtc agcagccctt tatagtaaat ccagattgcg
      541 atgtgacatt acagtatatc actgcagagc gcgctggggt ttacactagg aatgagtgca
      601 gttcacacca gatgagatgt cgaaattgag ttatgtagga atttggctgt tatatgggga
      661 tagcttttgt tttctgagga ctgaaagtta gctttatata tatatataat ctacacatac
      721 ct
//
LOCUS       KCPA01000166             572 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 18210tic ultra-conserved element locus
            uce-3757, sequence.
ACCESSION   KCPA01000166
VERSION     KCPA01000166.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 572)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 572)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..572
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18210tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>572
                     /note="ultra-conserved element locus uce-3757"
BASE COUNT          182 a          109 c          100 g          181 t
ORIGIN      
        1 aataagagcc tggtttctac atttcttttg ttcatgatgt atcaatccag tgtgaaagga
       61 aacataaaaa cagcccatat ataaaccaaa tgtgcaacac caaaagcttt aacaaacctt
      121 aattattcag gtggttaagg aacaagctaa atagcagcac tagtgcactg taaatccttg
      181 tggctgacac agaagtggtt atgacagctt tcacattatc tcattgcagt atcgaggcag
      241 tagtcgcagc tggctcatat gtcaaaatgt gtcaggactt aaatggtaaa acaggagtgc
      301 aacagcaatt ggcttttcaa tcaataatgc aatcaatata tttcacagat attttcccat
      361 atctaaatta ctctgcagag atgaggtagc ctgactgagt gtttataaat caataaaaca
      421 cacagctaaa ggacatctgc tcctgttctt tcacttcaag gtgcagtttg ccttttattt
      481 ccaactctct cttatttaag aatgtacttt tgagggtctt tttgcacaca aatcagtttt
      541 gagttgcatt ctgactatag actatttctg tt
//
LOCUS       KCPA01000167             583 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 18321tic ultra-conserved element locus
            uce-1544, sequence.
ACCESSION   KCPA01000167
VERSION     KCPA01000167.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 583)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 583)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..583
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18321tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>583
                     /note="ultra-conserved element locus uce-1544"
BASE COUNT          195 a          123 c          114 g          151 t
ORIGIN      
        1 tttctgaatt agagataaaa cagtgtcaaa ttggagattt gaggtcaggg tttggtttca
       61 gttccttgtg gctgtacaca aagaatctaa ttacagtttt aaatgcccaa aatgccatgt
      121 ccaccaaaag cccgatgctc attagtacta gtaattaact ttacaactgt caacacaaac
      181 accacacagg ctgacagata gatagtagct ctgagggtgc taataaatcc ggaaataaca
      241 acttgacacg cagatgcaca aaaggatgca ggtgataaag aaatgttgac atcaaatcta
      301 attatcttgg aaacggccaa gtactgcaca atccccagta atgcactgtt attgctggtg
      361 atgagcccca ctggaacggc tcttaaccac agcctacaac ggagctttta cagccccttg
      421 tcatatctag tgaggacaat atcaaaaagg aaattatgag tgtcatgacc cctccaagtc
      481 aaaaatctag tgatgaatat aggctcagca aggcatagca gattaccccc ttacgagttt
      541 taaagccagg atgatatatg acatttttat caggcacttt ctc
//
LOCUS       KCPA01000168             692 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 18431tic ultra-conserved element locus
            uce-3276, sequence.
ACCESSION   KCPA01000168
VERSION     KCPA01000168.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 692)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 692)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18431tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>692
                     /note="ultra-conserved element locus uce-3276"
BASE COUNT          246 a          104 c          119 g          223 t
ORIGIN      
        1 tgtcatatca aaccagaatg aaagtgcttt gtagtgttgt catcaatagt aaagggaaaa
       61 tattatttca atttaaccaa caccttgtta acagagcagg ccttacattc atgttgattt
      121 tctggggaaa gaatcaatta ggaaaaataa gtgattaaaa cataatacaa aattattgca
      181 ggctttagca caaaaattct attcagaaag agtacagcag tattaaacat ttttttgaac
      241 atcatctcta ccatgaagat tgagtgtcag ctactttttt tacctcctgc aggatttcaa
      301 gacttgattg cccaaatgac agtttactta ttttactgtc acatactttt gtgaaatgcc
      361 ataacaagtt gattacaggt ttcacatttt gcatagtgac aaaatcatct gtcatataat
      421 agtctaatgc ctgaaaacca tttaactttg ctactgaaaa taatgatatt tgaaacatta
      481 agggggttta aatgtgtaca ttttctaagt aagtctttgt tttaactgaa tgagaagatt
      541 cctttcaggc atgaatttaa gacttaccag acaacagcta gccagagggt gagataaatt
      601 aggaggggtt tcatgaatga aatgaaaaat ggaaatggaa agcttagata catcatagct
      661 ctacaaagat gaaaaattct tggctcctat tt
//
LOCUS       KCPA01000169             653 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 18542tic ultra-conserved element locus
            uce-6729, sequence.
ACCESSION   KCPA01000169
VERSION     KCPA01000169.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 653)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 653)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..653
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18542tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>653
                     /note="ultra-conserved element locus uce-6729"
BASE COUNT          168 a          117 c          128 g          240 t
ORIGIN      
        1 ggttttgttt gtgctaggat tttcagctta aaaaaccaaa ctgagaggga tttgaaaggc
       61 taaaccacag tcctcctcag gagcacaata gaatatcaag ttttccagaa tagtacctgc
      121 agagacaatc ttctttctga attgcaattt tagttttatt tttatatcaa tgtgactgaa
      181 ctagtggttt agtttttatg ttcagctgtc tgctagattt atactaatgt ggtatgtttc
      241 cctttctctc ttcagcttaa taaccagttt gtattttgtt ttgatttttc agtcccgtct
      301 tttaccttca caccaacagg tatatatttg cacttttccc ccttctttgt tacttaagca
      361 tgtgtttgtg atactgttta cataaccaat cagcccagct gtttcattaa tgacattatt
      421 agtagtgtgc atttgctttg tggctgacaa tatttatttg tgtgttccat gccagcatgc
      481 catttgtagc atgatcctga cagtttgtac aacctgggtt tcaagggagt agtgacatcc
      541 agcgacaata ggtgctttgg tagaggagga atgacttgca gagcccagat gctgacttga
      601 aagagattca gtgagattat agttggtgaa atatcctctg aatctgcatt aat
//
LOCUS       KCPA01000170             632 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 18651tic ultra-conserved element locus
            uce-2676, sequence.
ACCESSION   KCPA01000170
VERSION     KCPA01000170.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 632)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 632)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..632
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18651tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>632
                     /note="ultra-conserved element locus uce-2676"
BASE COUNT          227 a          106 c          102 g          197 t
ORIGIN      
        1 ataatcttcc actgagactg aacccaaaag tgattaaaag aaggatttct gtaatttgtt
       61 tcgatatgta acaaactaat tcaagctaat gtaatgttta taaagttact tagataatga
      121 caccatgcat accattataa tcattaaaac acaatctatg tgttttaaaa aaaacttaga
      181 tgattaacac aaaatcaagt tgatgtgaag gaacaattac ttttagaaaa aaaatcagga
      241 ggtcccaata ttctgtagaa tgagggagga tgcagctgta tgtcgacagc tttcatatcc
      301 tcatttgaat aatgtggcct gaatctgtca ctttattcat cctccttatg ctcagtgtac
      361 tctgcatcaa caacaaatta agttgtaaat aagagacaat catcactttt gtttttaagc
      421 agcttctgca tggagaattt caatgtactg tttctttttg acagaaagaa agggattcta
      481 cactctgctt atgtaagcac aaatatgagg aaaccaaccg aaatgaaaca atgagggagc
      541 acttgagaac tgctccaaaa tgttcttgga agtacatttc taccaccttt tttaatagga
      601 taaagaagac ctttactgta ataattaccc tt
//
LOCUS       KCPA01000171             576 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 18763tic ultra-conserved element locus
            uce-4858, sequence.
ACCESSION   KCPA01000171
VERSION     KCPA01000171.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 576)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 576)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18763tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>576
                     /note="ultra-conserved element locus uce-4858"
BASE COUNT          197 a          119 c          103 g          157 t
ORIGIN      
        1 atcttgaaga tgttatcagt ttaggtttta cagtttcaat acctactgag cttgcaaaca
       61 taaaaaatac ttaatacttg cttgtagttt ttagagcttt aaacactctt tggctgaact
      121 gacttttgca aagggaaagt aacttggagg ttaggttgct tttattgcaa gtaaacccct
      181 attaacaagc atccaggaca aaaggagtta atatttaatt aaaaccagct ctatccactg
      241 taacaatgac ctggagccaa acaaggcaga agatgtatga gtcattcttt ctgccagtga
      301 atgagacagc tgatctccga agcaattcct caagacaagc agtcagaact ggagttctgc
      361 ctccattcac aaaaacacag tccagcatga accatgtggc cccaaccaca agcttttcat
      421 gtcacaccct tccagaaagc tacagcaaag taaacttgaa ctttaggcat aaacacagtg
      481 atttcactgc tttgtctcaa gatgcagcac agacctgctg aggaacgtta tttaataaat
      541 gaaaagttaa gcaaactata aagggcttaa acttaa
//
LOCUS       KCPA01000172             730 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 18875tic ultra-conserved element locus
            uce-6654, sequence.
ACCESSION   KCPA01000172
VERSION     KCPA01000172.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 730)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 730)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..730
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18875tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>730
                     /note="ultra-conserved element locus uce-6654"
BASE COUNT          192 a          162 c          190 g          186 t
ORIGIN      
        1 cccaacatcc agcccctctt taaaccccag cagtggtttc tgatcgaaaa ggccagcaca
       61 agctctatga agacacagaa gggaaaatat ttctttctcc ccagtgttac cttttccctt
      121 tctgccatct catgactctc taaattcatg ggagctcttc ctcaaggtga aatgaaggct
      181 ctgggctgca tttggtagtg ccgacaacag gggatgaggg tcagggaagg ttaagcaggg
      241 agggggcagt gcaacaaggc ggcctgatct agtgattaaa caaagggatt cagccaacat
      301 gtgtaaaatt aagtgatcaa gagttgatta cagagtgcat tgattgtgta ctgatggatt
      361 aaacagagtc gtgctcggga tgcgattttc cgagccaggc acgaaaagca cgggcaattg
      421 acgtgttggc cagaaggacc cgcttctccc aatccctggc ttttatacat tctccggata
      481 aatctgcaga gaggcccgtg gaattataat cgattatcca tttctcaaag tcacttaagg
      541 gccctgagct acaagctaaa gtgccggtgc tacgaagagg cattgggtat gcgccggcat
      601 gtgcaggtgc tggcgcgagg ggaaaatgtg gcaatgaccc tgtgtgctgc aagctgatga
      661 atctattttc ttgtaggaaa tagttttgac agttcaatat ctgtgttttc gatatgtgcc
      721 ccacacgtcc
//
LOCUS       KCPA01000173             570 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 18986tic ultra-conserved element locus
            uce-1121, sequence.
ACCESSION   KCPA01000173
VERSION     KCPA01000173.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 570)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 570)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18986tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>570
                     /note="ultra-conserved element locus uce-1121"
BASE COUNT          201 a          104 c          114 g          151 t
ORIGIN      
        1 ggtgaaggcc cagcctaaag acacctcagg ttctaaatgt gccagcaaaa agattacaaa
       61 taatgttaaa taatatagtt tataacctca gggctgtttt caaacgcgta tagaccagtt
      121 gtcaacaggc agagaggaag ggaagggaaa ttataggctg cacaaaagag gaaagtaaaa
      181 gtgaaagctc cataaaagaa agtggaacta ttatggagca aaatgccaac tcattacaaa
      241 acagccaaat aagagagaaa tacagcttta cccgtaatag cagtttacaa gggaacattg
      301 tattgcaaca taacggtggt gctataattt gctctaacaa ctccaattat gccttttatt
      361 gatttggcaa cacatttaat aggagtagcc acacctcttg tgttacaaat cattaaaggt
      421 gttgaacagt gtaattttaa aattgtcctt ctcctacaga tgtcagtgtg acagcataat
      481 ttcccctgat ttctgctatg taaacagtgc gttacagtaa tttccccctt acaaagcaga
      541 aatgttgtca gcctgggttt gtgcagaaac
//
LOCUS       KCPA01000174             758 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 19097tic ultra-conserved element locus
            uce-6195, sequence.
ACCESSION   KCPA01000174
VERSION     KCPA01000174.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 758)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 758)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..758
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19097tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>758
                     /note="ultra-conserved element locus uce-6195"
BASE COUNT          243 a          119 c          155 g          241 t
ORIGIN      
        1 aaacaaatag tttacatttt gatattttgc tgaattcggc aaggatttat aggaatttct
       61 ggatccttaa gcaattgaat aaagcaattt ttagaaggca aatcaatcca tcaatattac
      121 atggtcctat ttttcttgga gcatatttaa aatcgtacgt ttgaggtgtc aaggttcagg
      181 agtcaagtgc tacatgtgat aaattaagga aaggtcagag gctatgcaat gcagtttcag
      241 aagattgtct acctctgcct ttgcagctca ttcatgctga agtgatgcac tctgggaatt
      301 actaccaaac tctgctctgc aacatctgct ctccctaagt gagttagtgc acgtcagaca
      361 tctttatgtc agaatattgc agtgatggat gcagtcttca gaaaatgctg cataaaaatc
      421 tggtgtgccg ttctggccat taagtgaaat tactatttaa attaatggcg ctgtcacagt
      481 ttatctgtgc aaagaatgaa cgctgattag ggtattaagt aattagcaat ttatcacact
      541 ggaacaaggt tgataataat taaagaagta atggtttacc aaagaaacta gaaagggagt
      601 cacttcttgt tatgtgagtg aaatcttggc tgaaaaattt aattcagtta aacaaagatg
      661 aggttcacag tgaaagaata cagctttgtt tgtttcaata gaaaaacagt tcattatcaa
      721 aattttagtt tgcctgtcag aagtcccttg gggctgtc
//
LOCUS       KCPA01000175             559 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 19204tic ultra-conserved element locus
            uce-6765, sequence.
ACCESSION   KCPA01000175
VERSION     KCPA01000175.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 559)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 559)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19204tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>559
                     /note="ultra-conserved element locus uce-6765"
BASE COUNT          143 a          131 c          133 g          152 t
ORIGIN      
        1 tttattcccc cagaaagtgg ataacatcct acaaaaatcc atccgacttt atttaactgt
       61 aacatttatt aagagcagtg aaaaggtcag cacggagtgt atgggctaaa ctccttcccc
      121 cagccttgaa tgcgacaaga aagcagatcc tttaagatgc aactatctta agctcccctc
      181 ttaaactctt agtaattcta ggttttggag acaaacgtca aagcagaggg ctcttccctt
      241 cattattcaa gaaaaggccc catcaatatt atctgtaata agaatctgct gttgacatgg
      301 ctcaccccgc agttcctgtt ccaggcagta gtccctgtca ataggattaa agtggattga
      361 caagtccact ggttgctgat tcattgctgc catcaggctg ccggctggga aaggcaaggg
      421 caccacgagc ctgccgtggc cagtggagct ttgatttctt gtgccggact ccctggagct
      481 agggagaggg aaagcctgtg agtggtttgc actcctaccc tgttgctttt ggctgagctg
      541 ggaagtttcg aggtggttt
//
LOCUS       KCPA01000176             525 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 19316tic ultra-conserved element locus
            uce-5733, sequence.
ACCESSION   KCPA01000176
VERSION     KCPA01000176.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 525)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 525)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19316tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>525
                     /note="ultra-conserved element locus uce-5733"
BASE COUNT          140 a           84 c          104 g          197 t
ORIGIN      
        1 ggtttgagtg ttcctgctgc aaagtccaat aatcgttttc atttcaataa catgcaaagc
       61 caaacttatt ttgagctttt ttggagagtg tcggtgaata aattttttga tagatttgtt
      121 tgatattatt aaacttttca gatgttgata ttactgaatg atggaaaaaa gcatgggttt
      181 actgcattat tagaaagaat taaagtagag gctatatttt acagtgtcgt ctttcaaatc
      241 tagccatgct gtaaactgat gtttgctgta tgctcctcct gatttgaaat agatgaaaga
      301 gaatgaacct ttaatcacca tggttcacac tatgattgag aactcggcgc taagaccgca
      361 actgtaccat caagtaaggt cttggattcc ttagtgtttt ggttgttccc ttctttgctt
      421 tgggtcatcc atgcttccta aaacgctgca atgtcgttag catggctttc ttgttgttga
      481 gtattaaatg tacactcttt ctgtcattta attagttggt gcttt
//
LOCUS       KCPA01000177             451 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 19420tic ultra-conserved element locus
            uce-6388, sequence.
ACCESSION   KCPA01000177
VERSION     KCPA01000177.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 451)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 451)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19420tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>451
                     /note="ultra-conserved element locus uce-6388"
BASE COUNT          133 a           66 c           93 g          159 t
ORIGIN      
        1 aaatattgag tcattcattt cattacagaa gaatagtaaa aatcagagta ggctctttca
       61 cttatttgtc tccaattttc tttcaggctg aggtatgctc tggaacagta gcagaagtaa
      121 tccagtctgt tgtgaatggt gcagatggtt gcatattttg ctttggtcat gtcaagcttg
      181 gtgagctccc aaattcgtta cagttaatta ctatgtcagt ctggtaatta catgctgtca
      241 gctcctggaa caataaacct ggagtatgtg aatagattag aatttctttt taattagctt
      301 tgcaaactta ccatggttta tttctacact gtggttgttt taatttgaaa aggtaaaatg
      361 tagcatcaga ttagcttatt caagagcaag tttatgtagg tgcactgtaa tgaaaatcaa
      421 aagatcagag atgcattaat ttgctgtggg t
//
LOCUS       KCPA01000178             533 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 19530tic ultra-conserved element locus
            uce-6005, sequence.
ACCESSION   KCPA01000178
VERSION     KCPA01000178.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 533)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 533)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..533
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19530tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>533
                     /note="ultra-conserved element locus uce-6005"
BASE COUNT          173 a          111 c           74 g          175 t
ORIGIN      
        1 gagtcatatc tactcactaa aacaccactt gcaaactaca gctgggacca ttaaataaat
       61 tttgcatggt ctaattaact tggtttgcaa tctcaattac ttttcaccca agaaatcact
      121 tttgttcagt tttatgcgtg ctgtttcctt tttctaaaaa aaaatgatgt aaggcatcct
      181 cagacaagtg aactctaaac ttcatttgtc tttcagcagg ctcgatggct atgcatttaa
      241 aaacccattc tatcttataa actaaaaatt aaatgtactc agctgtgatg gtcgtcattg
      301 catctgctat ttatatgcta ataccctcac tgaaagatct tgcaaattat tccaccatgc
      361 caatatctca tgtgcatcta ctcagagcca actaaatatt tttgaagatt ttggttaggg
      421 aaccagaata tttattgctg tagaacctag ttccctaagc acatgcatta ttcaaccgca
      481 acacaaaaca tacttcagtc acgttaaatg aaatttattc tgtgtaagaa aac
//
LOCUS       KCPA01000179             771 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 19638tic ultra-conserved element locus
            uce-385, sequence.
ACCESSION   KCPA01000179
VERSION     KCPA01000179.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 771)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 771)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..771
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19638tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>771
                     /note="ultra-conserved element locus uce-385"
BASE COUNT          183 a          185 c          182 g          221 t
ORIGIN      
        1 gctcgtgctt ctgactgcag tgtgctttgt ctgcagaatc ctacgttccg aacaatggaa
       61 tagccattaa gggcaggcac cagattgtgt tgaacttggc tgaactagaa aacaattaga
      121 tggctacacg atctcctcac acactgatac ttgcagcttc tgatgcatct aacatctgtt
      181 aacattatgc tttttttccc tctgccacct ttaactttct tagatcctag ctaccgttct
      241 ttccactctg gcggatacgg tcaggatgcc ttgggtatgg accctatgat ggaacatgaa
      301 atgggtggcc accaccctgg tgctgactac ccagttgatg gtctgccaga tcttggccat
      361 gcccaggacc ttatggatgg gctgcctcca ggtgacagta atcagttggc ctggttcgat
      421 actgacctgt aaatcatcct ttaggtaaga agctccaacc ttaaattaaa accaaaccaa
      481 gaacagctca cttggttggc agggagggat tggctcgatt gggtcccagt gtgccagaat
      541 aatgaataaa tgctctggaa acacactcca aactgacttc tgccgtgaag tgtgtaatgt
      601 cttgtgcacc ggcttcatgc agtctttatg gccctttacg actctttttt ctctttgcag
      661 ctgtatcatc tgagtgaact tgcattgatt ggcctgtaga gttgctgaga gggctcgagg
      721 ggtgggctag tatctcagaa agtgcctgac acactaacca agctgagttt c
//
LOCUS       KCPA01000180             747 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 19748tic ultra-conserved element locus
            uce-985, sequence.
ACCESSION   KCPA01000180
VERSION     KCPA01000180.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 747)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 747)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..747
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19748tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>747
                     /note="ultra-conserved element locus uce-985"
BASE COUNT          240 a          142 c          166 g          199 t
ORIGIN      
        1 gtgaaactgg gaaaaaaatc tgtgctccag attctttctg aatccagaga cagctgaacc
       61 acagcacaag cctcagtttg gagaagctat aatagaagca ctgggacaag agaaaaatct
      121 cccattgtaa tgattcttag gttgggggat aaacacagta ttgagcttga acagaggaca
      181 gtaatatagc acagttttta agaggctatg tataagcggt agaggatgaa actgatggtt
      241 gaagtctaaa taatactacg tatctcacaa cttgttgaaa agcaccattg ggggagattc
      301 acagctgctg aattttctgc agttaataga gtcctttgat tcacagcagt gccccttgca
      361 caaaaaatac tggcctttgt gtattaccag aaactaattt tctatttggc tgaaaaggga
      421 aaaatggggt tattgcttct ccctcctaca gagcttttca ttatgcctga tgcactcaac
      481 ttctaagctc ttcggagaaa aaaaaataac tgaagaggca agaggtagaa aaatgagctt
      541 gttagcacat tagaagtgaa gtatcttggt gggccctaga aattcccagt ggtgtgttaa
      601 cttatcactc tatgcatgct ggcactgata gtctcccaat tgatcactct cttttcgcac
      661 caaaggtgct gccaggaagc aaaggctgaa ggcccacagg agaacaagct gctatcaaaa
      721 caagctgttt ttaaaagtct gcttgaa
//
LOCUS       KCPA01000181             698 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 19857tic ultra-conserved element locus
            uce-1644, sequence.
ACCESSION   KCPA01000181
VERSION     KCPA01000181.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 698)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 698)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..698
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19857tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>698
                     /note="ultra-conserved element locus uce-1644"
BASE COUNT          227 a          112 c          142 g          217 t
ORIGIN      
        1 gcaggatggg actatctgaa actgtgaact tgctttgttc agaaagagtg agcaggaaga
       61 ttttcttgtc tgtcggtggc cctacccata tttcagagag cactactttt ggggagtgaa
      121 taaagttacc tgcaattttt tactccaatt agaagaattt ttggcattta ttacttttta
      181 acttgttttg catagtgcta tctgtttagc tgggtcacag agaaagccat attttctatt
      241 taaaatgatt tgtgtatatc gcttgaccac ctcaatggtt tagtgaaagc aaaaggcagc
      301 gattaaacag tttcaaatga ggtgtcctgc tgattttatc aagtctgctg aatgtataat
      361 gaaaaaggag aagctgacag tgacactgtt gagaaaatac agactacctt agctgaacca
      421 tttaaggagg tccaattata gatcaaattt aaagggttga aacagcagat ttacagacac
      481 aaatcaatga gcatggtaat cctgatgaat atgacagata ttcctgttac agaatattgc
      541 tgtggttgag gatcattacc tttacagtac caaatacatc acatctaaaa gcagtaggac
      601 actctaagtg tgtacttgta ttgcaggcaa tgactattca tttacacctt ggagcaatat
      661 acaactaaat gctgaaactg agaataaaga agattttt
//
LOCUS       KCPA01000182             513 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 19969tic ultra-conserved element locus
            uce-8005, sequence.
ACCESSION   KCPA01000182
VERSION     KCPA01000182.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 513)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 513)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19969tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>513
                     /note="ultra-conserved element locus uce-8005"
BASE COUNT          161 a          103 c           98 g          151 t
ORIGIN      
        1 agccttcaaa ggcacagaca ggttctgact ggattaacat ttattgactg tttaagtttt
       61 ttgcttcagg acagagatac acgagtttaa ttgcagaggc tgttctgcca actgatcact
      121 agagtggcaa ccaaagcttt actaatcggt ccttcattaa agaaaagtct ctattacaaa
      181 acaaattaag catgctctga tcccaacctg caggtccaat ggcattacag caaagtttag
      241 gctgctagag cactgaaaaa cttattaagg tttagcgctg agatagcact tttgtattga
      301 ttttacaata cacaggtatt atgatttatg gagtgctagt gtcactctaa caagctgaag
      361 gacacacaat atcatctcca acatcattaa aattcagaag cctctagaac taactcatca
      421 accaccgtgc attgtcacag gctatggagc tgtattccag ttggaaaatg ctgtgagttt
      481 cctggacagt tgtcttccgg aataattaaa ttt
//
LOCUS       KCPA01000183             633 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 20080tic ultra-conserved element locus
            uce-6480, sequence.
ACCESSION   KCPA01000183
VERSION     KCPA01000183.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 633)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 633)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20080tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>633
                     /note="ultra-conserved element locus uce-6480"
BASE COUNT          189 a          127 c          114 g          203 t
ORIGIN      
        1 aaacatctaa aaatttcatt gtgctggtaa caaatccact aatatctagg cttctatgac
       61 aatggtaatt aattaacaat cttgaaggtc aagtgaatcc attaatgagc ttttactgta
      121 gctgttgacc ttacatgaga tagacaggaa aagggaaaaa atttattcat taaacaagtc
      181 tttcctgttt ttaaataagt aaaaaccttt acatttaaaa tcagtaaatg gtaaatgtgt
      241 atgtccagct gtggatgcct cttatctgat cagaaaatca tctccttcgc agtttcggtg
      301 tcagaactgc tcatcttcgc aagtctgctc acaggatggc actttctatc aggtaagagg
      361 cactcacgac tgtacatact acagtcatta aggccctgtc agcacctcca ttgtaattca
      421 acttgtggag tttttatagt tcctcacaac aatgtgctaa aactctgtga gtgaggcctc
      481 attcctgcag cataagcttt attcagagga tttaggagtt tgtcttactt aggccagctt
      541 ttgtttgtgg agagatatca ttctccatat cagcctcaaa ggattatcta cctcttccta
      601 tctcattcac tgagcagcac ttgggcaaga gat
//
LOCUS       KCPA01000184             377 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 20177tic ultra-conserved element locus
            uce-3629, sequence.
ACCESSION   KCPA01000184
VERSION     KCPA01000184.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 377)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 377)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20177tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>377
                     /note="ultra-conserved element locus uce-3629"
BASE COUNT          109 a           58 c           80 g          130 t
ORIGIN      
        1 cagaatttta acatacaatt taaatcatct ttctacatcc tgtggacttg gagctgtcaa
       61 agaggcaaat ttgaatggaa aagcaaaaag tgtaccagct ataattatcc ataactttgc
      121 aggcctgttt tgttttataa ttacaggtct taatgctaga ttgtacaaag tcatttataa
      181 atagtcagaa cagagggact ttgttttaac ctgtagattg ctgggggttg tggcagctga
      241 tgggattttc cctgtgtatg tatggggtga gctgtgtaat gattgatgaa tcccttaatt
      301 aactcctaac aagttaagat atatggcctt tttctcctga cacatctgtg tttgtcactt
      361 ttgaagacgt ggataag
//
LOCUS       KCPA01000185             709 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 20287tic ultra-conserved element locus
            uce-5327, sequence.
ACCESSION   KCPA01000185
VERSION     KCPA01000185.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 709)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 709)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20287tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>709
                     /note="ultra-conserved element locus uce-5327"
BASE COUNT          239 a          155 c          106 g          209 t
ORIGIN      
        1 actttatatc acttcatttt gtatgaacat tagtctctac tcataagagg acccaggact
       61 caggtaatat aaataatgaa ctgcctttta ttttgtgaag agagttagag gggagggcag
      121 aaccatgctc tcttgcaaca gtgaaggcaa ccatgtagtg caaacaggcc cacctctgat
      181 gagttagttg gtgttagtcc ccttaagtag acaatcacaa atacctaccc caaatcccag
      241 actccactgt agttacagta gtactggaaa aaaaaatcac ttttgttcca attctaaaat
      301 tgctgtcaag actccagaga ctataaacaa catctttcac tgctctgacc cccatgcaat
      361 tttaaatccc ccaacctttc tgagcactgt tggtgagcag ccccattaca tcttaatgac
      421 tgtcattaat ttctaaagag tgttaatttc agatttttaa tcacccctta actattcaat
      481 taaatttcaa taaaatgtta agtacttaca agtcttctca tttttcctaa aatacttact
      541 acattaacat gactgaagtc cagtggtaaa aatgaatgaa attaaatgac acaacattac
      601 cgcaacagct gacaacaaaa attctgcaaa ctacaaactg aatcgcacaa acccttgcaa
      661 tattattagc atactttggg tagctttcag gcagacctca gttaaattg
//
LOCUS       KCPA01000186             679 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 20398tic ultra-conserved element locus
            uce-343, sequence.
ACCESSION   KCPA01000186
VERSION     KCPA01000186.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 679)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 679)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..679
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20398tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>679
                     /note="ultra-conserved element locus uce-343"
BASE COUNT          227 a          135 c          142 g          175 t
ORIGIN      
        1 aaaaatgaaa gaaaaacgtt cctctagatc tattatgcct ttgggctcca tgtgagggaa
       61 gaaaaaagac agagaaagct actgtgaagg tcacagagtg aaagaacttc ctcagggcac
      121 agaataaatt aaatcccaag gaaaaaataa aatgtgattt ccagagtgtg aggcacaaac
      181 tcaaaatgac aatgattgac aggcaaacta tatccgtgca atatcgaaga ctgcacgttc
      241 tcatttacct cagtgtagcc agcaagcgcc cattaaacat ccgtctgatg cccaaattaa
      301 ccttcttggc aaactgaaag aggcacaaac tatcataatc aacctttcat tatcacagca
      361 gcctctagtt aaagggtcag aataattgtg ccatcagagc cctgattgtt ttcaatcaac
      421 agacgactgg agtgacagct cagtgatgga gtagtttgat gaaaccgcac caggcctaat
      481 cagagcagat gaaaggaagg catgattggt gcaaatgaac agtcgtgcct ctctttttca
      541 tttacaatct gaaattactc ttaaatttac ggggtttttt ctcccttatg agtacctctg
      601 gaagaatgtt tgacttatta tgggttctga cagtgcagag ttataaaaca caggtagggt
      661 tttcagccca ggctttaag
//
LOCUS       KCPA01000187             747 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 20510tic ultra-conserved element locus
            uce-6657, sequence.
ACCESSION   KCPA01000187
VERSION     KCPA01000187.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 747)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 747)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..747
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20510tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>747
                     /note="ultra-conserved element locus uce-6657"
BASE COUNT          267 a          109 c          119 g          252 t
ORIGIN      
        1 tcccagaaaa gtatcatatc gtaacaataa tacaattact cttcatttca atccttaagc
       61 actactagtt aaataataaa taagagttcc gattgatcta ttgttaaaat ggctagtaaa
      121 tggtcttttt attccaatta acaaatcatc tgctaaatct atgaatctta atattcaggt
      181 ctattcactt caattcatac aatttatctg caaatagttg ttgggctttt gattctaaat
      241 ataattagct gataattttg cttggctgaa ttacttttct ggagggcctg ctaaggctct
      301 cagtcgcatt atctagcaat aatgaatctg ataggtgaaa ttttttactg taatgaggat
      361 gagacacagt tgtgacacct gagtctagta ataacagaag actgctaatt atcgacagca
      421 cttttttgtg tgatgcacag agaaaaaaaa tccctcatta ttaaaaaata aaaagttaca
      481 attataagtg acaccggagg agagtaaata aaatggagtg attaaaacat tgctgcttta
      541 agggtgtttt taattaagtg gaaatgctaa tgttgtcata cttagcagat gggattaaaa
      601 ttagttattg taagtaactc atattttatg ttatggtttc cacagcatgt ctacaagatc
      661 taagaaagtg atacattcca taagacattt aaaaaatgaa attctcatag tctttacagc
      721 tcataataat gaacatcatg aataaac
//
LOCUS       KCPA01000188             584 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 20617tic ultra-conserved element locus
            uce-5489, sequence.
ACCESSION   KCPA01000188
VERSION     KCPA01000188.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 584)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 584)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..584
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20617tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>584
                     /note="ultra-conserved element locus uce-5489"
BASE COUNT          181 a          127 c           84 g          192 t
ORIGIN      
        1 taaagaattc ttcttttatt ctaggaataa aatactcttt ttgaagagtc agtgacatcc
       61 atagcattat aataagtacc taggaacacc tagaaacact acactgcact ttctgtccat
      121 ggcatagatg agcctactct ccatcatact tttcctggac aagacatttc atggttctct
      181 ttacccttgc tgtcaatggt tgctctcttg catcaatttc atttagaatt atactataga
      241 tcaatgcagt tcaagaccag tgtggctgct gtgaatggtt gactgcacat atattcattt
      301 aatatcacac tatgacatgt attggccagc tgcatttcct cttcacttca gcagttaatt
      361 tcatcaataa cttatctcat agcctgtttc ccttctatcc agaaaaaggg actgctttct
      421 gccaagtcag ctttcaatag tgatcacaaa agcaaaaccg aaacaataca atcctcttct
      481 cattgcaata gatgtgacta agtaatttta actattctat aaggtaacgg attactaagc
      541 tagattaaag atgtaattag aaagtataac tcttcacccc tacc
//
LOCUS       KCPA01000189             401 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 20718tic ultra-conserved element locus
            uce-2423, sequence.
ACCESSION   KCPA01000189
VERSION     KCPA01000189.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 401)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 401)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20718tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>401
                     /note="ultra-conserved element locus uce-2423"
BASE COUNT          140 a           58 c           67 g          136 t
ORIGIN      
        1 aacaaccttt attgtattgt tgtaaatttt gacgtggtac aacaatttga ttccttaaaa
       61 attaattgcc taggagtgtg tttaagtaat attgattatg ctggtgcttt gtgttgatct
      121 gtgatactta acccagcatt taaaatatct tttttccatt ttacaattgt gatgcaagaa
      181 taaaagcaaa gtacaaaaca aataggcact tgaattctaa tagcaataag caataaatgt
      241 caggcatctg gaaattatgg ttgcaatttc atcagagtac actttgttct attatgcctg
      301 catgaatttt gctacaggca aaatctatta cagataacag ttaagaacct ttctaatcta
      361 cacagatagt catggaaaaa tgctagaaaa cgaaatgttg g
//
LOCUS       KCPA01000190             758 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 20831tic ultra-conserved element locus
            uce-1004, sequence.
ACCESSION   KCPA01000190
VERSION     KCPA01000190.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 758)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 758)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..758
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20831tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>758
                     /note="ultra-conserved element locus uce-1004"
BASE COUNT          203 a          119 c          142 g          294 t
ORIGIN      
        1 gtttattgtt tctctttttt taatggggct gctaaaatgt tcttaataat tggagaaatt
       61 agctttagtg ggacgtgcac aattcagtat gggagttttt tgatactact ggcaagtctt
      121 ttgttaattc caattttgca aatttgaaga tcccttttca agaggtatct atttgacgaa
      181 tgtgcagttt ttcagcatgt attttctgtc ttgtatcaca gtgttttaga agaatctatg
      241 ctttacttat tcactaggct ttcaatagag aatcacatta atccttttaa gctccttatt
      301 ctaatgattt attttgttga aaaccgtagt gatcctcctt tgaattttaa tgattgctgg
      361 ctattcaagg attcattgtt ttgacttcct gtccttacct ttgtttctta catgtctgta
      421 gggaacacct gtctaatact gtatctggcc ttagttctca ctggcttacc atattcactc
      481 aagcctatct taaggcgtta agttgaaatg ctagctactc atccatgaaa ataaatgtag
      541 gatatttaca aagataggca gatagacagc agagggatga ctgaatgttt tttgatgtaa
      601 atattatttt caggtgattg ttgcaaaatt tgctcagtat ctatagggga tttctatttc
      661 aaaatttttg aagcaaatgc agtatgccaa cagttgtcag gatttggcat caactgctga
      721 atttaggtca tggcactggc ttaaattgga tttcagtt
//
LOCUS       KCPA01000191             613 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 20938tic ultra-conserved element locus
            uce-4945, sequence.
ACCESSION   KCPA01000191
VERSION     KCPA01000191.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 613)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 613)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..613
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20938tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>613
                     /note="ultra-conserved element locus uce-4945"
BASE COUNT          170 a          103 c          137 g          203 t
ORIGIN      
        1 tttaactttt cctgaggaga gcagagacat tgaggcatga agacatgaga acagatgtgg
       61 gacgtgttca agagtcagca gtgtctgggt gcatcttgcc ctctccaggg aaccactgaa
      121 tatttctgga aatatggctt gtcttacatg gcataaatgt tctgtgttag cacaatgctt
      181 tatgtatttc aaactgatct tggacagtac tgtgggggta aaaaactgaa taatatctat
      241 tttttttaaa cagaaggcca tcattagcca tgtctcacct gacatccttt atctgttcag
      301 agttcaagca gtttgccgaa atgaaatgcg tagtgacttt agccagacta tgctctttca
      361 aggtttttta catttaacta tttgcagagt gcagtgtgaa gttatttcag aagatatttg
      421 aatgcatata gacaatgcca atttcatatt ttgatctgaa tctcatttcc agtgaggagg
      481 gtttgcccag gatttgtcag gggagaattt agttttcttg gtactagtct tctgaaacaa
      541 attcatcaga gactgcttat gtatcagagg cacagctgta acagaatgtg agtctgatcg
      601 gtgtctgttt tat
//
LOCUS       KCPA01000192             564 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 21047tic ultra-conserved element locus
            uce-885, sequence.
ACCESSION   KCPA01000192
VERSION     KCPA01000192.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 564)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 564)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..564
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21047tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>564
                     /note="ultra-conserved element locus uce-885"
BASE COUNT          158 a          133 c          107 g          166 t
ORIGIN      
        1 cacagcagac cagggactgc actagaaccc ttgcagggag cagaatcgag gactgcccat
       61 gctacctgag caaccaggtc aaacatgtcc ccagtaatga agatccattc attactgtaa
      121 catgcatagc actgtagatc actttcatgg tctccaaaga agctgagcag ttatcagtaa
      181 cgttcaaaaa tccactggaa agtcattcat ttcactttat agtcctaatt agccatttgt
      241 atagttctat aattaaatat gctcctttct catcaagttt ttcactttag taatgatacc
      301 actgtgccac aaacaggccc catgctgttt ggtttgggac ttattcatag cttttaattg
      361 gtcacccagt ggttagccaa taaccccttc tatgggaagc aacactcaga atgctgttaa
      421 tgggctagag gcatagtgat tgcctcctgg tacccagcag tactgggaat aaagcaattt
      481 cctccactgt gttgtgtgcc caatagctaa tcctctccac tcctgaaatg tacactattt
      541 ggttataagt atttgtactg gctt
//
LOCUS       KCPA01000193             634 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 21156tic ultra-conserved element locus
            uce-3569, sequence.
ACCESSION   KCPA01000193
VERSION     KCPA01000193.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 634)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 634)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21156tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>634
                     /note="ultra-conserved element locus uce-3569"
BASE COUNT          187 a          114 c          126 g          207 t
ORIGIN      
        1 atatctttga agagttactc ccagtactac cctaggaagg ataccaggga ggcatatcat
       61 tctgcctaga tgaattgctt ctctgcatat ttttctttgg agctcctgga ttatgttttg
      121 taaatcagtt agcttcctag ccagagatta aggtaaattc tgctaaggac taaaagttga
      181 cttagagcat taggaaggat taatgtttag ctgtggtgaa gctgaagtac taggttagca
      241 tgtttacgca gtgccgtaga tcacaattaa tccaaaatta gtataaaaga tcaacagcaa
      301 ctgctcttgc atgccagctt ggcttagtcc taaaatcaag acttactttg ggggcaattt
      361 gtgtgcaaag ttgccgtgca tgtgccctaa taggtttaaa gctttcagag gaatccatgc
      421 attttaaatg tttggcttct ttgccctctg ctttgaggaa ataagtgtag aagtcagtac
      481 tcgagatgct tctgctttct atctctgtca cagatctgtc agaatagatt ggtgctacca
      541 atgaacaaaa gcaaatacaa tttcctgcct ttttttaaaa tacgtgcttt cattcatcat
      601 tacagattaa taaaaataat ttttctggca aaaa
//
LOCUS       KCPA01000194             661 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 21270tic ultra-conserved element locus
            uce-2895, sequence.
ACCESSION   KCPA01000194
VERSION     KCPA01000194.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 661)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 661)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..661
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21270tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>661
                     /note="ultra-conserved element locus uce-2895"
BASE COUNT          212 a          103 c          113 g          233 t
ORIGIN      
        1 aatcattatt tcctcttttg taaagcattt tcttaaacta ggaaaagctt tgttaaaaag
       61 tcttcaaatt atgataaaaa atgtaaaata taatttaggt ttttctttgt tttatagcta
      121 atgcaaatgc atttcaaaat caaagtactt gttagaattc acatctttac actgctactg
      181 agattgtgtt ttgatttctt tgacatgatc cctaattgct gtgagaagaa tcagttcagt
      241 atttttgttc ttagattccc cctcctttgt cttgcagcta cttgtggcag attccattaa
      301 caattgcagt aggaaatacc agccacatct catcagaggc aattatatgg gtgtctaaca
      361 aatcaggtaa aaataaactt tcctcccagt ggaatctcat aaagcatact tgtgttttcc
      421 tcaaatgtat ctctggaatt gatcctaggt aattgtttag ttgctctgca cccagtttta
      481 actgcttaaa atgaattgca gagctgggaa gggagggagg aggaatgaag gatgagcaac
      541 aatctagatt tataatattg cagaatttag acagtataat gtaaatcttt tacaaagaag
      601 tgttatattt ggcaacacat atcaaatcaa atgcaattca cttttttgat tggtgaaagt
      661 t
//
LOCUS       KCPA01000195             534 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 21375tic ultra-conserved element locus
            uce-1709, sequence.
ACCESSION   KCPA01000195
VERSION     KCPA01000195.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 534)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 534)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21375tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>534
                     /note="ultra-conserved element locus uce-1709"
BASE COUNT          179 a           93 c           90 g          172 t
ORIGIN      
        1 gctaaatata ctctttttaa gaccaggtac aataggctat atatcttgaa aagagctgta
       61 gaacctgatc agaatcttgc ccactgtaat gtttgataaa tctccaaatc tttctataca
      121 gccatctcag tagccagatg ttgattgtgt acacattgtt ttgtgttgct tgcataaaca
      181 ttataatcac atatagacaa cagcagagct acaatattta gaaaacattt ttcacacctc
      241 cttattaagc aagactatga aaattatgac tcatcactgc accattgttt ttgcctgttt
      301 tcttgtgctg gttgaatagt catagacagc tggtattaat acaataggta gtgcttaggg
      361 aattaatggg cgatgtataa tacaccacaa aggtatctgt catctgaaac aataagcaca
      421 atgatgtaag atgtatatat ttgaaaattg tgctcagata aaattttctc gagcacaaag
      481 acataccttg actgcgatgt aaaattagtt tttaacaatt gcaagaagtc tgcc
//
LOCUS       KCPA01000196             708 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 21485tic ultra-conserved element locus
            uce-4023, sequence.
ACCESSION   KCPA01000196
VERSION     KCPA01000196.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 708)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 708)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..708
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21485tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>708
                     /note="ultra-conserved element locus uce-4023"
BASE COUNT          218 a          127 c          154 g          209 t
ORIGIN      
        1 aagtaaattt gtaaaataaa tacttcattg gcataaaatg ttgaatactg tggcccaaca
       61 aataacaaat gttttgatta aatcatattt cagtacaatg ttaaattcca actccaactg
      121 atttggcaca ttttcttttt tgaagctacc tttgataaga aaaaactcat cagtttagct
      181 tcctgttaac aaagagacag cagccgtctg gattattcta gatccgcagt gaaactgcca
      241 cactatgtat gctcaaacta aagctgtgca agtttgacaa ggggcagatg aatccaggag
      301 ttattgtgca ggggtttaag tctatgcggc agctgacggt tgaaataatc atctatacat
      361 cgctctgagc tagctgggga aaggttgaag ctgtatattt tcaacatatc tagcctaatg
      421 gttaatctgt tgtcttgtac agggggtgct gtgtggaatc acagcaatag ctgacagttt
      481 ggaggaattg ctgtgggtat tttcagttgc ctgattcaca aagtggtagg tagcaaaaca
      541 ggattgtcat tgaatgaggc aagtcatgct gtcactccca tcaaaaaaac tctggtagcc
      601 aagagctcgt caaaatattg attatttgca tttagtaaca cagggctgca acttcccatg
      661 aaatctgagc cagaatgcaa aatggtgact gctcctttgg aggtcagc
//
LOCUS       KCPA01000197             882 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 21598tic ultra-conserved element locus
            uce-794, sequence.
ACCESSION   KCPA01000197
VERSION     KCPA01000197.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 882)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 882)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..882
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21598tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>882
                     /note="ultra-conserved element locus uce-794"
BASE COUNT          258 a          181 c          170 g          273 t
ORIGIN      
        1 taactttaat gacaattttt gtaattctct aggagctatc tgagagcaag agaccagtat
       61 ttgcaagtca aatgaccaaa gcatcttttg tcagccaatt aaaacatctt cactgagacc
      121 tacagaacta acctttgtgt ggtcttggtc tcagatgaaa acagttcctt gaggcagttg
      181 gcagcatgaa ttttgagatg acactaaatg tgtgtgggaa cttgcaaaaa gcaaatccaa
      241 aaaaagattt aggatcaggg tttttctttt ccattttctt catagggaga aaaaggtgac
      301 gttagagatg ctggtaaaag ttagtcctgg tcaagcttgg ggtgaacaat agcacagtgt
      361 tgttgtgggc tgcttccacg acttagatat tcttcccatg tcagtataat cactactggg
      421 aggtagctcg attaaggatt accatatcat taatagtatc catgactttt gttcaaaggc
      481 tacttgtgta atgttgcctt gtggatgaag ctttctaatc ctctgagctg cagctgtaga
      541 gaaggggctt ccttagagcc gcccacactg acttccctgt ccccttggat cagttctaaa
      601 aaacagacag aaacaacagt caactcaaag ccagaaaaaa gaaacatcca ttctacattt
      661 ccacattcat ccccaagctt caatccctgc caatgtctcc cattcatctc ttctctaaca
      721 tccagatcac cactcggatg gtggccagat taaaggggaa caatgcagtt ttaaatgtaa
      781 agtttgcatc taattttttt ctttgcatga gaaaaaacac atttattcta tctatgtgtc
      841 tgtctaatgc tcagcctgta gtttgtcagt cttttcttat tt
//
LOCUS       KCPA01000198             468 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 21701tic ultra-conserved element locus
            uce-4536, sequence.
ACCESSION   KCPA01000198
VERSION     KCPA01000198.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 468)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 468)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21701tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>468
                     /note="ultra-conserved element locus uce-4536"
BASE COUNT          161 a           83 c           85 g          139 t
ORIGIN      
        1 tgttgagcag gaattaacaa tcccagcgtt aaaaataata actgcctagt tgagggttta
       61 gcatttaagc tctttaaaat caatctaaag ctcaggcatt gaatgcacat cattaaaccg
      121 cggtcaagac taaatcatta actaatacct gttattctgt ttttcttttt agacctccaa
      181 aaggaagcgt ggctacatta agaataaact aattttaaag aaaggcaaga gacccaacag
      241 gaagacagtt taaacacact gttctgattg ctaatacgaa gcagttgtcc ttgagataac
      301 cagtctttgc ctttagctca aatcatgttt cacagcaaca tgagggtaca gaaccatcat
      361 tggtccagat tattgtacaa aattttcagg caatgtctga ttaaaaatat tggcttattg
      421 agaacagctg ttttagattt gtaatgtgaa gcaagacaga gctgctat
//
LOCUS       KCPA01000199             664 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 21807tic ultra-conserved element locus
            uce-7527, sequence.
ACCESSION   KCPA01000199
VERSION     KCPA01000199.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 664)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 664)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..664
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21807tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>664
                     /note="ultra-conserved element locus uce-7527"
BASE COUNT          224 a          123 c          123 g          194 t
ORIGIN      
        1 attttcccta cttaagcaaa attctattgc tgcaaagtaa aaattctatt gctgtaaagt
       61 aattgtatga gtgagagccc ctgtttaagg gaacagttta tggttactgc ataaagcgaa
      121 catttcaact tggctaacac aaccactgaa taaacacata ttgatattat agaacaaaat
      181 aatatattag tgcattgctc atttgtgctc tgatagtcac cctgatacta ttagtcatgc
      241 ggggagtgac aaacacaatt acactcgagt gctaatagag tggaagggca aaactgcctg
      301 acctcggcat cctgggtcga tttaaatgtt tgatgtctca ttgaattagt atcacagtgt
      361 gaaagacaaa gctcaaacta atggaaatga gcctggacat gcaatactgc tgattgggct
      421 gacataatta gaataatatt cttcacacag ctaataacaa gcagaagaaa taaataacca
      481 agagataact taatgactgc atgctaaaat gctcctttga atatgctaag gttagcattt
      541 tctatttact tatgcagcac tgagggaatt ttctccatgt aatcattagc tgtggtgatc
      601 agctccacac tggtcactaa ggccatatga aactatgcag gttgacccaa cttttcaaca
      661 tcat
//
LOCUS       KCPA01000200             835 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 21921tic ultra-conserved element locus
            uce-3798, sequence.
ACCESSION   KCPA01000200
VERSION     KCPA01000200.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 835)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 835)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..835
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21921tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>835
                     /note="ultra-conserved element locus uce-3798"
BASE COUNT          237 a          185 c          166 g          247 t
ORIGIN      
        1 aactgacaca ctgggttgtc tcagttagat acacactgtg aatatgaatg gcatttgccc
       61 caggatttag acaggacttg aagctgaaca gcagaagagt taatttatgg tacacagtag
      121 gactgcaacg cctggaattc tccatcatga gaagaatcat tggaataatt taacttaagg
      181 aaactgggca tgcaacatga tcctggggag ccatgcaatt aatgttctgt ctgccacatt
      241 aaagatttac cactgagatg gtccatttgc atacaaccta cccccagtgc caggaaaagc
      301 ttcacttgct ttcaccaccc agtacggcac cagacagcaa tagtgagatg ctgttttgat
      361 tcagttactg ctcagctgta tatcaaacat gttagagaaa caggtcttga cttcaacatg
      421 tttgggttgg atcagtgaat tgagcacttg ctgagctctg gaatacaaat gatcaaccta
      481 tctgtctgag cactttccct gttggtgcca tcctctcact gcctatggct aatgtagtaa
      541 tatgtatgca gtgcacagca tcctgtgtga ctgccacttg acaaaatgtg ccagatcatc
      601 attgtctcca gacgagacag atttattata attcaatatg ttcctcgtga gcactttttt
      661 ctgtcttatg ttacagtctg catagcattc agaataataa ctacatgctc ttatgacatt
      721 gcagcactga attcttgtgg ctgaaaaaat catttccttg gctctgacag aaattcaccc
      781 acagcaatat cttcctgttg ttgaaaatta atgtgggact tccctgctct atccc
//
LOCUS       KCPA01000201             636 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 22029tic ultra-conserved element locus
            uce-2348, sequence.
ACCESSION   KCPA01000201
VERSION     KCPA01000201.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 636)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 636)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22029tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>636
                     /note="ultra-conserved element locus uce-2348"
BASE COUNT          215 a          117 c          116 g          188 t
ORIGIN      
        1 atcattcctg ctctcaagtc ccactgacca gagacagatg agcagctctg aaaggggtca
       61 ggctcaagtc tgcatccatc tcacaaatgc agtgagtgaa tgactggaag taaaatattc
      121 cgcgtaaaca ataagtacgc acagagccca gtcttcatta aggtagtttt tatattttga
      181 aaagcaatat taaaaaacac tggaaaatgc aataacagtt gcttctacaa gttttaacct
      241 tgtattgctt ggccattttg acatataaat tattgcttac tagctctcat aaatacacga
      301 cacaatagta tgtacagagg caaacaagca tgaaatatgc aaaggaaaac attggcaaca
      361 ttgattctgg taaatcaggt tatttcatac ataccaggtc tcatgatggt ggataactac
      421 tagctgtagt ccctgagaag ttaggtaaat accttgaggg gggttctatt ttattacttt
      481 taatgcaagt tgacaccatt atggcactca agagagaaca ggcaggtgtt cttacttcag
      541 ctcattgact tcatcccagt gtttaacagt gtataagatg acaataaact atgcaaataa
      601 atattactct gctaaaatgt ttaatattta catctt
//
LOCUS       KCPA01000202             428 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 22139tic ultra-conserved element locus
            uce-2688, sequence.
ACCESSION   KCPA01000202
VERSION     KCPA01000202.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 428)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 428)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22139tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>428
                     /note="ultra-conserved element locus uce-2688"
BASE COUNT          136 a           83 c           70 g          139 t
ORIGIN      
        1 gatctgtacc aaagatattt agtcactgga ggcagtcact ctggtttaaa ttacaatgga
       61 ttatctgact aaactgttgg ggaaatattt actaaatctt taagaagact aattctttgc
      121 aaaacccttt gaaggcttcc caaattattt tttcattatt aaacaagcac ttcagatttg
      181 ttatcttacc tttcataatg tctgcgagta catgtagcag cacttgtgct tccagggtta
      241 ccacctaatt catcataaat atgtttccat tgtcgacggg ctgttatctg taaaaatggc
      301 aatggaaatt taatcttgca tcattctaca gcgtttgagt tcaaaatgca cgtatgacac
      361 tttcagaaca gcatgtacta caagcactat aaaagcccct acagaatata cagagtacac
      421 agagcttt
//
LOCUS       KCPA01000203             701 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 22249tic ultra-conserved element locus
            uce-2219, sequence.
ACCESSION   KCPA01000203
VERSION     KCPA01000203.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 701)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 701)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..701
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22249tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>701
                     /note="ultra-conserved element locus uce-2219"
BASE COUNT          188 a          171 c          161 g          181 t
ORIGIN      
        1 atccattgaa actgcttcag gccatttttc agttacactc tctattggct gcatccctgg
       61 caaagtaaca cttctggata acctatctat tttacaaccc cgagtgtgct ggtcagaact
      121 gctgaccgtt tccttgccat tgcaagtgcc atcttctccg gtatacgctt ggtcaaatat
      181 tccactcttt ttaagcacgt gtaaaggatt acagaaacct ctatgttcat ctccagagag
      241 cagccagaaa gggttaaaca aaatcaaccc tgacaatact agaaacagtt ctctcagtgt
      301 gtgttggttc actgctccac agggcatagc agatgttgtg tctggtagta agaagggccc
      361 aggaggtgtg agctgtcaat cacttttttt cctaactaca ggctgtgcta tggatatgaa
      421 gcacgactaa aacaatctgt ctcagctggg gtgtgtgagg tatcaataac ccttggcaga
      481 ggtgtcaaga gccttgctgg aatcaaacta ccctgctgac cagctgctta gcaagttaac
      541 aaggcagcat tcagtgctcg ctgccctccc agcccaacaa ttaacacaac tggagcgggg
      601 ctctgctgaa atgcaggagg aggccgcatc gcccttgcgc tggcgacaaa gggatgcaga
      661 gttctttatt cagaagcatc cgtaacaaca tagtgagaga a
//
LOCUS       KCPA01000204             315 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 22352tic ultra-conserved element locus
            uce-5579, sequence.
ACCESSION   KCPA01000204
VERSION     KCPA01000204.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 315)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 315)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22352tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>315
                     /note="ultra-conserved element locus uce-5579"
BASE COUNT          100 a           67 c           49 g           99 t
ORIGIN      
        1 acacctgaag ctgcttaaaa tatttggaaa tattttaatg aagtgttttg agagatcacc
       61 taatacaact ttaaaacaaa ttttactatt attattttct cttcatccct tgccagagga
      121 aaactataaa tcttgtctca gctgaatgaa caccatttat catattcatt ttcttgtcaa
      181 tacaattatg aaaagccttt ggcctttttc caaggagcct gatttgctgg agaaactcaa
      241 ttagtataag caagcctgtt acagagcagc cccgtttgga agcccagcac agccctggca
      301 atgaacctct gaacc
//
LOCUS       KCPA01000205             331 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 22460tic ultra-conserved element locus
            uce-7584, sequence.
ACCESSION   KCPA01000205
VERSION     KCPA01000205.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 331)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 331)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22460tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>331
                     /note="ultra-conserved element locus uce-7584"
BASE COUNT           83 a           58 c           73 g          117 t
ORIGIN      
        1 aagaaagtaa atctcacaac aacttggagt aggtttacag ttcttcagcc tttgctctag
       61 ccctggagcc tgatgggacg ctggtgtcct tggaggaatg gtcgaaggaa ttgctggggg
      121 ccaattgctg attttatcat tcaaacacaa aatttgttac accactttat cggtcacagg
      181 gaaagcaatt atagtgtagt tcaattttcc actcaatgac tgtgctgggg atcaaagtct
      241 tgttatttaa atgtgtttgc ctgtgttttc ttctttctgg agatggagct gattatttta
      301 cttttctctt gttaaataat caggctattt t
//
LOCUS       KCPA01000206             989 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 22571tic ultra-conserved element locus
            uce-1348, sequence.
ACCESSION   KCPA01000206
VERSION     KCPA01000206.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 989)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 989)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..989
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22571tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>989
                     /note="ultra-conserved element locus uce-1348"
BASE COUNT          300 a          188 c          164 g          337 t
ORIGIN      
        1 agtcattgat tcaatttaga ctgctttttg ccgagaatca tggctttatt gtcaggtata
       61 tcacactgag gcatatctca acagcatttc agttctcaca tcattgctat ttccttctaa
      121 tatgttattt gtagtgccag taccgtggat ttttgaactg attttatcac ccttgataaa
      181 tatttttaat ggccaacctt acttctttaa tatatgcatt ttcttgcata tgtctaacat
      241 tcaaaatact gttccagaag caatatttgt ttacatacac aaacagaaaa aggaaagcct
      301 gacttttagg cttttgacag gagtcttgta taagtggaag acttttaatt ctcaaattgt
      361 ttcacttcaa taactctttt aaagttgttg cgccaagatg cctggcggat taagctccat
      421 tgccttttct tgttttgaac taatgtattc ttgatcaccg tttaatgaaa ctatatacca
      481 catggagatt tcacattaga taagccatgt gaaaccctca tcagacaagt agctctggct
      541 ggtggtaatc cttcagatga aaatttcaga ctagcaggtt ttccaattta aatgagcccc
      601 tttaactata aaaaattggc acggtatgat tgctaaaaat tatttttaaa tttttatgtt
      661 gccaaagtac cccggtggct gtgaaaaaca gaaatactgc cgtaaataca gaaaacatta
      721 actggtcact gaggggatcc aatttacaac ccatagagac aactcacatg gctcactgac
      781 actggcatta ttgggtttgc aatagggcat tcagttctgt tcacaccaca cgaaagcaaa
      841 gctattctta aatatgcaat taaatagatt tattccacaa gtttctctag tcagtggtta
      901 ttactcactt ttacttcatt gcaccctgat ctatagaatt ttcatgatgt gttcaggtag
      961 cctttagaag gcaacagaac ttgttatga
//
LOCUS       KCPA01000207             765 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 22684tic ultra-conserved element locus
            uce-3446, sequence.
ACCESSION   KCPA01000207
VERSION     KCPA01000207.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 765)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 765)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..765
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22684tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>765
                     /note="ultra-conserved element locus uce-3446"
BASE COUNT          184 a          147 c          151 g          283 t
ORIGIN      
        1 tgttgcgaga agtagaagca gacaaatgaa aagttatgaa aaatgacatc aaattctgtc
       61 agagttcccc tttgttatct ctaaccttta ctgtgctttg gatgtatgtt gctaagaact
      121 gacaactgaa attcagtttt gccatttgtt tttttatctc catttcacta tgacattaca
      181 tcagcatttt gcatacttcc ccagcttaaa gatgtgctct tttagatgtg tgtgacttta
      241 acaatgttct gttcactttt tcttggatag acccaacaat tgcttgttga cccattttaa
      301 ccccttttga gcatcatctt caaagtgtaa ctgtccttga caatgaaaga gaccttccta
      361 ttgtctggtc cttccaggca atctttagca ttgagttaaa tggctttcag atggaggagt
      421 tggctggaag gaaggagaca aagtggtctg ttgtttctga gtgactttgc tagagtttcc
      481 cttttttctt ttagaatggt gcatttctat agaagatgac agacgttttg acaggtgcaa
      541 tatgctttga actgttgtgt cagataattc ttttgtcttg gtttttccca gcagagtggt
      601 acatctcctt aggatgctga tatgcatatt gtttgctttt catttagtgt ggtgaagcct
      661 tccatcctcc ttttctctct ccctctctaa cttttttaat ggctctttgc atatatgtag
      721 ctgacccaga tgggaaggcg gagtgaccat gacttaaacc tctct
//
LOCUS       KCPA01000208             630 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 22796tic ultra-conserved element locus
            uce-3180, sequence.
ACCESSION   KCPA01000208
VERSION     KCPA01000208.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 630)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 630)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..630
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22796tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>630
                     /note="ultra-conserved element locus uce-3180"
BASE COUNT          189 a          125 c          119 g          197 t
ORIGIN      
        1 atatattata tggaaaaggt aatatattta tatggtgtta caatagaaat ttctttgttt
       61 cactggaaga cttaatacta ttgccaaacc ttgaggtttg ttgtctggaa gaggtaactg
      121 ctttcttatg acaaagactt gaaagatata ttcctttaac acccctactt cacgttcaca
      181 tgtgttgaaa ctcattgctt ctggaaatga agatgctctg gtgtcagctg taaaatctgt
      241 atctcacttc ctcagacaag tggatattta ttgacagggt gtgagagaga aagagaggag
      301 agactgcctg tcctggagcc agtaaccttg gtgaagatgc aatgtcacaa acaccaagcc
      361 atcattctca tagatgtaca gcatattatt taaagggaaa caaatatcgg ccactgaatg
      421 tcactgcaag gacacatctt ctgcctctta actaaactta tcagtgcagt ggtttaatat
      481 ggtacctttt tcatcctccc ctcaaattca tcttacagag cagctcttga cactaccaga
      541 gagcagtcaa gactaagatt tagtgacgtc tgcttcaaac agatctagat ttattgacat
      601 ttgttgcctg cttcttctct cagtaactgc
//
LOCUS       KCPA01000209             517 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 22905tic ultra-conserved element locus
            uce-5534, sequence.
ACCESSION   KCPA01000209
VERSION     KCPA01000209.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 517)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 517)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22905tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>517
                     /note="ultra-conserved element locus uce-5534"
BASE COUNT          194 a           86 c           78 g          159 t
ORIGIN      
        1 attaagtgat aatgctccct ttgaattttc agcagagaat aatgttttat ttaaaatagt
       61 tacagcgtgc cttttgattt ggagtttaaa gtaaataata tttgtacatc taaaacatac
      121 tcaagacaaa tgaaaagcct ctagatgctt ttgtatgaga tgctgaagag ctctacaaac
      181 ttaaaagcac aacctcaatt aagcccatct tcatctggaa aaaaaattag caactgaaag
      241 ctgaatatat tagataatgc acacttgcag gagagcattc tcttagcaaa aaattcttga
      301 taaccaacct aaagctggcc ttcgagttgc tcgatgctaa ttttgtttga aactgtttaa
      361 ctaactctga atagatatcc atattcaaca aagacataat taatggcaac cttttcttct
      421 gcttagaaga catcataaca agcagaaaag tacaaaaaga tttttatagt aactaattta
      481 aggacaaagg gttgacctct agcatttcat taaataa
//
LOCUS       KCPA01000210             725 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 23017tic ultra-conserved element locus
            uce-170, sequence.
ACCESSION   KCPA01000210
VERSION     KCPA01000210.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 725)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 725)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..725
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23017tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>725
                     /note="ultra-conserved element locus uce-170"
BASE COUNT          232 a          139 c          126 g          228 t
ORIGIN      
        1 taaatgccta atttttccct acttggggaa aaatcaaata cagaagaagt ctaaaagaag
       61 ggttactgaa atgctttgta aaattacact gtataattaa ttccatagta agaacgtttt
      121 tatggtgtgt gttggtgacc ttttattacc atcaagttca caatgctggt gggctgcctt
      181 ttaatccctc cgcagacaaa ggccctaaat aaacacagat cccttcctgg gaaaaagtcc
      241 tctctggtta aatggtaagg aaatgagtaa atcattagta atctttaaag ccaaagctat
      301 aaactcaagt taccttaagt taaaatgaaa gtgtcctgca agagtttcaa agttctgtca
      361 cagatagaaa tctccagctc ttgactccag actaggcgcc agctgataaa caaacaattt
      421 aagtcaagag ctggagaatt cccagctttt tcatttaatg gctttggcca agagtattta
      481 ttgcctccag ttttattctc acttagctct aagaggaaat ttaaactcat cattatctta
      541 aagccccata tgggccacag tcagctcacc tgatagagct ccttttactc tgcctaaatt
      601 ctactcccca ctagaagtga tgtaatagtg taaactaatt aaatgtagtt ttaggctgac
      661 tttttaatag gctaaataaa ttttgttcaa tatggtttat attcccactt ggggcagtaa
      721 cgatt
//
LOCUS       KCPA01000211             816 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 23128tic ultra-conserved element locus
            uce-7468, sequence.
ACCESSION   KCPA01000211
VERSION     KCPA01000211.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 816)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 816)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..816
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23128tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>816
                     /note="ultra-conserved element locus uce-7468"
BASE COUNT          235 a          155 c          157 g          269 t
ORIGIN      
        1 cctggaaatg ccaaattaaa atgccattca tttatgtata aggattgaaa tgtttctttt
       61 ccaggaacag taccagtttc tttataaggc aatgctaagc ttggtcagca ctaaggagaa
      121 tggaaacggc cccatgacac tggacaaaaa cggtgctgtg atggccagtg acgaatccga
      181 tcccgcagaa agcatggagt ctcttgtcta attggaaacc tgaaaaggca cttaatttgt
      241 agaacttctg aagactgagt gaactttttt gaggcctttt ttgccagact ctaggttata
      301 caataaccca attacttttt tacactgata aaagttttga tatttatttt ttgccatttt
      361 atgtcttaat ggtatcctac tgagcatttg cacctctgtt tatttcacac agtgaagcgc
      421 gattttatct agtttgcact atatgatcag tgttactgcc tataatatcc taatacaaga
      481 caagccctga tgtgacattc catgacaaca aacatttctg ttcaaatgca gtgaagtttt
      541 gctaactaca gtgaccctcg aatcttaaat cttgaatgct aggccagatg gagtctttct
      601 acaacagata ctgtacccct cataccatat ttattattta gtgatcatgt caaaggtgtt
      661 ctgcattcca gtggagtgga tgagcattgt tcatcctttc ttgacaaaat gtggcaggtg
      721 attattagct acagtgaagg tctaacagcc ttgtggagct gaaacaatta tttctgtatt
      781 gtttcaaatt gctgtgttgt acacttacag gtctga
//
LOCUS       KCPA01000212             540 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 23240tic ultra-conserved element locus
            uce-3222, sequence.
ACCESSION   KCPA01000212
VERSION     KCPA01000212.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 540)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 540)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23240tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>540
                     /note="ultra-conserved element locus uce-3222"
BASE COUNT          187 a          113 c           84 g          156 t
ORIGIN      
        1 aagtacaaac aaaaaaacca ctaaatttca ctgttcttac ttccactaat tatgcacgta
       61 tagtaaagca aaacttcatt tcaagtcaat aaactgaaag ctagaccctc tgctttaagt
      121 gttagattta ggaaggattc ctttgctgaa aacaaacata tacacggaag tgaataagac
      181 acagcaatca aagtattttt acttatataa tggaagtttc tcctatatct aacactgcac
      241 aagggcataa tcaaaaggta agcagaagtc ccttacactg cctcgctttg ccagagaatc
      301 accgtagtct gctggcaaag tccgcttgct ggactttttc tgctcatgtt caactgcatc
      361 ttcaattata ggctcaagcc tcatctggac aaacaccaaa gatgtggatc aatttttttt
      421 cattatacag tgaggaaaga tctaaaaatt tctgaaatat ttagaaaact gcatagaact
      481 cactgatgtt taaataaaaa acctaatgag gctctggcct ctggaaaccc ccctcatttt
//
LOCUS       KCPA01000213             823 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 23350tic ultra-conserved element locus
            uce-1906, sequence.
ACCESSION   KCPA01000213
VERSION     KCPA01000213.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 823)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 823)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..823
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23350tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>823
                     /note="ultra-conserved element locus uce-1906"
BASE COUNT          245 a          133 c          164 g          281 t
ORIGIN      
        1 ttttttgctc acctttcaca ttgggcaagt tcataggtta aaataatgta aatcagcaca
       61 agtccactgg aaccttttgt gccttttgaa gaaccagccc ctcagggtta ggtgccttcc
      121 ttttgctgtt gggataagaa ctactttcct cacaggagtg tttaaggctt aattttttat
      181 agcatataaa gtgctcagag atgttcagat gagggatgtt gtgaaaatgc aaagtagtat
      241 tattgttgat aaattattta aaatattgtg gtccattgag aaaatactgg tttgtaggca
      301 gtgaagtggt taatacgatt gcatctctta caggtttcac cagatacact cactcactta
      361 caatggataa ttgttagctc ttgttgtgca gatgctgttg cagatggagc cctgtacctg
      421 catgcatagc aaatgaatta gactggcaat cccctttata aagcataaat atgtaatttg
      481 ttcagctgtt gtaattaaat atgtatgtgt gaaacagcca ccattcaggt cattaatgat
      541 gcgccatgcc aaattagagc ttacagacag taatgtacat tgttgtgcaa tgagggaatt
      601 gcaaataaca tagctaagcc tttcctagta aagtgatgga ttcagtggct ttaaaaggaa
      661 tatttatatt tctagcattt tgattgcttc agtctgtatt tacattgatg ctcaatgaaa
      721 aagatacaat tggatgaaat ttttcctgtt ttgttttata ctctttgaac atgatagact
      781 acccattagg tacgtgtcac acaacattta ttgggtgtaa cat
//
LOCUS       KCPA01000214             540 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 23459tic ultra-conserved element locus
            uce-2831, sequence.
ACCESSION   KCPA01000214
VERSION     KCPA01000214.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 540)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 540)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23459tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>540
                     /note="ultra-conserved element locus uce-2831"
BASE COUNT          191 a          101 c          103 g          145 t
ORIGIN      
        1 cctcacctca tactcaatgg ccatgagagg agaagaaaag agtaaacaaa caggagatga
       61 cctttgtgag taagcataaa aagattaatc gacccccgtc agccagtcat taaatcaaat
      121 aagagctttt cttgtacttt taaagctcag atttacagtc aggcaaattg tgtaaaaagg
      181 ctggtaatac agtgacgccc agtgccactg ggctttagaa agctgacagt tgctgtaaaa
      241 tagtcattaa acaacctcta gaagagactc atcagcagat gcccccaggt gaaggagaga
      301 gaaagctgag agaatgaagg agaatctaac atcttagcat gactgaatta aacagagcat
      361 attatgctga ttttcagagt cagcccagta atttaatttt catagcagtt cctttgattg
      421 tagcaaccat tttatgaaac attaataaaa ctttttttta tgtagcacac atcccttttc
      481 catttcatta aggacaggat gtacaaattt gctgaccatt agctctgtaa atgacaaaaa
//
LOCUS       KCPA01000215             568 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 23570tic ultra-conserved element locus
            uce-4122, sequence.
ACCESSION   KCPA01000215
VERSION     KCPA01000215.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 568)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 568)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23570tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>568
                     /note="ultra-conserved element locus uce-4122"
BASE COUNT          194 a           92 c          105 g          177 t
ORIGIN      
        1 gtttacttaa ttttgtattt tctaccaaga ggagtattta tttttcacag ccttagtgga
       61 ccatacagca acatgggagg aataaagcag atatgggtgg ggagaaacaa attcattttc
      121 gctctgtgtg tttctatgct gtggaataga ctttatgctt attcacacag agggagttta
      181 gaaatgtttt tagaaaatgc agatgtgtaa agcattctta ataaggatgg gaaaagagtt
      241 tgcactcccc ttttaaccac tctctcacct cagccctttt cagcatgtaa ccttattctc
      301 tgtgggatta cttggatgaa aaccaattag agaactgctc acacaatata aatgcataca
      361 gattagtaca gattgaacgg taccaatgcc aactaatcat acagtatata aagtcctaaa
      421 caatatagat attaaggaat gatggggaaa tggattcata ttgttataaa actgagcaca
      481 aaatggaagc agcataaaac tgtttattta aataataaat aaagtatagt tttcttttac
      541 cctttgtggc aatctgccca tagacaaa
//
LOCUS       KCPA01000216             636 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 23682tic ultra-conserved element locus
            uce-5447, sequence.
ACCESSION   KCPA01000216
VERSION     KCPA01000216.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 636)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 636)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23682tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>636
                     /note="ultra-conserved element locus uce-5447"
BASE COUNT          231 a          125 c          111 g          169 t
ORIGIN      
        1 taatccaaat atattcaaaa ctttcataag ctctgtcatg tgtcttgtgg caggagcaaa
       61 acctttccct ggtacaatgt ccattgccgg caatggatgc accaaaaccg ccaaggagct
      121 cagtgttatt gcacaatata tgaagacctg gaattcttcc aaaagcttaa aataaaaata
      181 atggaattat tctgacattt ctggacacct gcattaatac tgtatgacta agaaaagcat
      241 gtcagttgca tggactgaac cagcgatcaa catgcgccca gaatgcacac tagtaaaaat
      301 gcagtcaaag gaagtagtct tcattgccta taggtcactt ccagtcaaag gttaaagttc
      361 aaagactgaa tgatcaaagt gctcattttc tcagtaggac tatcttctgc tacgaggatc
      421 acaaaatggt ggcatcaaca tgtgtcatct ttaaaataaa agaagagcat ttatggaaaa
      481 catataaaca aggtgctata ggcagaaaca attcctagca tagactaaca tgcagaggaa
      541 ataccccgat ttcgttttgt tcaataacga ctcaagagta tcaaaacttc caaaatttag
      601 caattactcc attaaaacaa cattgatgtt taaaaa
//
LOCUS       KCPA01000217             537 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 23795tic ultra-conserved element locus
            uce-4458, sequence.
ACCESSION   KCPA01000217
VERSION     KCPA01000217.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 537)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 537)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23795tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>537
                     /note="ultra-conserved element locus uce-4458"
BASE COUNT          125 a          126 c          143 g          143 t
ORIGIN      
        1 gggtcccctg tgatccgggc tctgtcttag ccatgggctg ggggcactgg aaagatgcac
       61 agcgagagga gagggcaggc tggcatcaga tgggaagagg gaggactcac cagcgggctt
      121 gacccgcatc tgtaatttgt aaagagcatt tttacaccag atcaatgctt tcctcagcat
      181 tttaatgcac cccattggtg tccttaaact ctaatgatgc agtctgtgag aagctgccat
      241 ttattaccca cagatggggt gataattatt gacaagattg taactaataa ttaaacccat
      301 ttgctccttt aaacaagttg gtgtgaatta tttgcaggga gttctttagc aggtctgtgg
      361 tcactcccgc gtgatgttgc ccaggagcaa tccccaggga ggagggaagg ctgcttgcaa
      421 atcaaacctc tggcaagagt ccttcctctc accttctgtg ctcccggctg tgttagtgag
      481 agtgtgtgag cagcacccca gtctccaatg ctttgccttc tgaagttcct tccaggg
//
LOCUS       KCPA01000218             810 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 23905tic ultra-conserved element locus
            uce-1890, sequence.
ACCESSION   KCPA01000218
VERSION     KCPA01000218.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 810)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 810)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..810
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23905tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>810
                     /note="ultra-conserved element locus uce-1890"
BASE COUNT          262 a          142 c          145 g          261 t
ORIGIN      
        1 gaagaacata aatagtgagg cggagtgttt gatgtgggct tccacataag gtattgaagg
       61 cacacatcgg taaatcctga acctgccaac tctttcttgt gcagtgtcac tccagtctag
      121 ttagagtgta tttagaaagt agctaaacac acttttgtgg aaatcattaa ataacacagc
      181 gattcataca tttgcagcag acagcttcta atgcacatta ttaactgaaa ataaaatctc
      241 agcatttatc ttatatgtta ttttatcctt cccagtatga ctgagaatat aataccctaa
      301 agtttaagac tggtttgtaa acacagtccc tagtgtctac tattgatctt ttgctatttt
      361 aatgcatttt tactgaccga catgtcctgt ggtaaagaat attgcctaaa ttagttatct
      421 gattggttct tttgattaat gatgggactg tgcttcatta cacatgacaa catgatcaga
      481 ataatcactg cagccataga agttgggact ggcatttttt attccttcat ttttaaagtt
      541 catttataaa attatttaat gtatacgtcc taagttgtaa tttatttaca tgacactttt
      601 ttcgatggga actgttgtac tgtgtcacaa atggctaaga aaacaaggta aactagatgt
      661 acaaatcaat gtcttctggc tcaaggggaa aaaaacataa tcaagattca agagctgacc
      721 ttgtccaaag tccaacttgt cacacaacaa acagtgaggt gcccaacaaa tcactgggat
      781 cagcaggatg tattccaagg aatgtttaaa
//
LOCUS       KCPA01000219             537 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 24012tic ultra-conserved element locus
            uce-67, sequence.
ACCESSION   KCPA01000219
VERSION     KCPA01000219.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 537)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 537)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24012tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>537
                     /note="ultra-conserved element locus uce-67"
BASE COUNT          161 a          105 c          128 g          143 t
ORIGIN      
        1 acagaactgt taaaatgttt ggggattgga acttaaactt gtgaatctag catttttgga
       61 gaaagctcag attgttaagg aatcagcagg acacatcacc aagctacaat aggttcactt
      121 tcatgtggat ggtgtagcag gcaagccttc atggaaaaac tctgaatgtg aatttagcta
      181 gttttggata aagacgcctt tcagcgtcaa taaacaccat gaatgcagcc acggtagagt
      241 tacaacttaa tgagatgagg ggaagtgcac agggtcaggc ctcatctccc ggcctctgtc
      301 atgctaatca gctgggcagc ctgcagctga aaaactgctg gaatttttat ttgcatttca
      361 tttagttgga aggaaattga cccagatggt ccacaaaggc aatagaaggc tggcaagcag
      421 tctagtgctg cacacttttc cgaggggctg cacttgtccg cccgtccctc ttggagccca
      481 aaacataaaa gattaaaaca gcgtaaggga attgatttca tgatttttag ataattt
//
LOCUS       KCPA01000220             688 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 24124tic ultra-conserved element locus
            uce-412, sequence.
ACCESSION   KCPA01000220
VERSION     KCPA01000220.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 688)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 688)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..688
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24124tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>688
                     /note="ultra-conserved element locus uce-412"
BASE COUNT          205 a          140 c          137 g          206 t
ORIGIN      
        1 aacaacttta cagaagcttt agtggtgcct ttgttcagta ccaattacaa ggatttcatg
       61 caattgagat gttttcattt aaaaacatgg agattacaca tgcaaattcc ttgctgaaaa
      121 tggggaaaag cagtaaggta tccttggtta actttttagt tatttaaaag tagcttgttg
      181 gagattgaat atttctatgt ttcactagag cttttaaata taaaagagat atgagactat
      241 atctgacacc atcaggcata ttatattaaa atttatgaac aacttcatca aaaaccactt
      301 tccttctcct gcatagagac agatttgttc tgacataaac gttacatggc tggttgcagc
      361 ctcagattaa tgcgaagacc ctggcgattc cttttagacg ttattttatg aaataatacc
      421 tgtcagctgc tgcctgatcc cagaaaaggg ggcaggtttt ccaggtcatc ctgccatctg
      481 tcagctaaag ctcatctgtc cctccacatt accacctgat ctgtgctaac aggcctcaca
      541 gggagccctg cttcattggc ccggtgggag cccggcaaag agactgcgcg aggacatcac
      601 ctgtgattcc cagatttaat taccactgaa gtgatgaaga tgtgcacaca gattgaaatg
      661 cttttgaata aattcatggc tcagatag
//
LOCUS       KCPA01000221             550 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 24232tic ultra-conserved element locus
            uce-3322, sequence.
ACCESSION   KCPA01000221
VERSION     KCPA01000221.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 550)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 550)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24232tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>550
                     /note="ultra-conserved element locus uce-3322"
BASE COUNT          158 a          122 c          102 g          168 t
ORIGIN      
        1 taagtaaatc atgcttccca atgtgaccat gaaaacactt ggccaaacca gagctttgct
       61 tacggtcatt gtaaggtttc atttttttaa agttatgtat gcctgtctgt atacattggt
      121 gtatattgtt gaaaataaac agagacctta tgttatgtcc attgtgattg catacaaaag
      181 atttgctgtg cgcttgggtg atcagtgaag cttgaatctc cccctattta ctgtatggtc
      241 actgtcagtt caatgaactg cctccttgtt ctccaccatt gtcccacact cccttaaaca
      301 tttgtcactg aagtgcctcc aaagacaaat aaactgtcac caagaattca aacctggtaa
      361 ctaggaatga aaagggatca gaacctactg gattatttta catgaaatga cgcagctccc
      421 cctggaagag ataccctgga caggacttca gcaagaggac ttccccctct gtcaggaaag
      481 gtgaagtccc ttgcttaaat ctgttcttgc tacatcactt gacatttcaa gatttccatt
      541 tgtctgaaaa
//
LOCUS       KCPA01000222             801 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 24342tic ultra-conserved element locus
            uce-522, sequence.
ACCESSION   KCPA01000222
VERSION     KCPA01000222.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 801)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 801)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..801
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24342tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>801
                     /note="ultra-conserved element locus uce-522"
BASE COUNT          240 a          161 c          155 g          245 t
ORIGIN      
        1 cagagcctgt ttgtgcagct tctctttcat gccttaccta gacaagggtt gggacttagg
       61 cagggaagta cagggcttcc tttgcactgt cttaacttct gtgactctct agctttctct
      121 cttttctctg tctctttcct gatttggctg cttagggaca gacaggtaat ggagaagaaa
      181 ttgaaaggga aaatacaggg aaaatgtaaa tgaaaagaag ttattataac tgttataatg
      241 aagtgccttt catttaaata taagaatgta acgctgaaat gaacttgtga tcctgaaatg
      301 catttttaat gagtttcctt tttattttgc tgcttcagtg gcatatttta aagacccttt
      361 gaaaaaagcc acattaaaaa ccccaccaaa tgccacaaca tgcaaaattg gatattggtt
      421 tattccaaaa ctgctgatca ggaagagtgg ctcttcaaca caaaatgttg cagtcacttt
      481 atttaaatga gtttgaattt gcattgtgat gtgccattct gatttagaaa aaaaaaatta
      541 gattttcaga tcaaattgac ccagccagtg aagcattaag aaactggcag gtttagtctg
      601 aaagcctcat gttatatcaa acctgcagcc ggtggaagtc acagagcaac agtgagaaaa
      661 caactttctc cctgaaatct ttctcttgtt accgcataag agttctcaca tattttctcc
      721 ttcttcccat aggagaacgg cctttccagt gcaatcagtg tggagcctcc tttacccaga
      781 agggcaacct cctgcgccac a
//
LOCUS       KCPA01000223             459 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 24450tic ultra-conserved element locus
            uce-7646, sequence.
ACCESSION   KCPA01000223
VERSION     KCPA01000223.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 459)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 459)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24450tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>459
                     /note="ultra-conserved element locus uce-7646"
BASE COUNT          149 a           86 c           81 g          143 t
ORIGIN      
        1 gcccctggga atgaaaacgt ctgagctgca gtcaaatata attacctcat tctcatattt
       61 cctagtgagt gagaatgcat caatgcttgt gtgcccttgt gctgatagat tttgccacac
      121 agaataatca ttgttggaat taagcataat tgtcaagaaa gacttggtca tcatgagaga
      181 gactgtctca tacaaccgtc cttttgcttt ccaacagtaa ttactttagt aattaatctc
      241 tgtcatttaa ctgtattaca ttttgaaaag agaaaatgga agaaagactg gtttctgact
      301 aatttacatc acagtttaaa atcctagaac agggtgaatc agatgtcaaa aaataggccc
      361 tttctaatac ctagcacagg cacaaatgaa gttagactcc taaagtcagc ttcataatat
      421 ctatattgcc tgaaagtcta cacttcaggg cttttagtt
//
LOCUS       KCPA01000224             269 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 24562tic ultra-conserved element locus
            uce-3697, sequence.
ACCESSION   KCPA01000224
VERSION     KCPA01000224.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 269)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 269)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24562tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>269
                     /note="ultra-conserved element locus uce-3697"
BASE COUNT           96 a           55 c           52 g           66 t
ORIGIN      
        1 cccctagaaa tgagtcacaa aggtttaaga tatattgcta tctcaagtgg agtcagaatg
       61 gctgcaaaac gttgcctgcc aacactttga tccatccaca tgaactggat atagacataa
      121 gagcttacta aacaaactgg acagagtccc agtgggaaca ctcaaaaatg tattaatcaa
      181 agtcaagcgg cagagcaaat tgaaccagtt cattaattat gaaaattctc tcaccaagtg
      241 acactgtgtg aggttaacac gtttgaatc
//
LOCUS       KCPA01000225             708 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 24672tic ultra-conserved element locus
            uce-1824, sequence.
ACCESSION   KCPA01000225
VERSION     KCPA01000225.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 708)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 708)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..708
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24672tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>708
                     /note="ultra-conserved element locus uce-1824"
BASE COUNT          209 a          130 c          129 g          240 t
ORIGIN      
        1 tgaatgcatc tttaaaatgc atgcagccaa tttcagtttt aaaatcatac atgaatatta
       61 ttattaaaat aataacaaga attagtaact gctcagctta atttgaatgc ctaaataata
      121 aggagagaaa tatgataagt agttgtcaat attaaaaccg gctgaaaggc ttcaggcctt
      181 gtagcaggta gaatgaaaca gcagatttca gtatccacaa tcctttcagt attaaatttt
      241 cagtaaaata aaattacttg tatatgaaaa catagccttt ccccagctct cttttttttc
      301 ctgatcagct gatgaagaga ctagcagctc gctgctttgc tggcttgtta attttatccc
      361 cactaactgt gatttccgat agccggcctg ctgatagtgg taaggtaaat atcctttttc
      421 attgccgtct tgaagattca gtagaactac atcacaggca tgtgtaggtg tgtaacacat
      481 caaaagtcgg tgttctccgt gtttcaatgt acaactgagt gcttgaggag agcaatgaca
      541 ttaactgttg acagccttgc atgctgtatt tattactggc ttttctagca tccaagatgc
      601 agagaaattt ccttttctta atcttcatta gcctcagtgg tttatagcgc gtgtcctgct
      661 ttagccagat gaatattaat gaatttgtgt gcacccttct tttttctt
//
LOCUS       KCPA01000226             401 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 24778tic ultra-conserved element locus
            uce-4558, sequence.
ACCESSION   KCPA01000226
VERSION     KCPA01000226.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 401)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 401)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24778tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>401
                     /note="ultra-conserved element locus uce-4558"
BASE COUNT          164 a           59 c           78 g          100 t
ORIGIN      
        1 ttatttaaga aaagagaata taaaattaag aaagacagat ggactcataa gagtgaaata
       61 caaatagtct gaatcaggat tgatttcaac ataatgtggt ggaggaatcc ccacttattg
      121 atcaacttta aagcccatgc acagcactta aaaagataaa gtaagcaagg tcagataatc
      181 aaagcattta aatagtaaaa acagcaactg ccactgtaga ctgctaaaat aaatccataa
      241 tacaaattgc tttagcaaaa agtggatgag cagctgatct tcctattgaa cttttatact
      301 gttcagtgac cacactgggg agaggattgg aagaaatgcc ttgaagatca atattgagtg
      361 agaggtagca gagattcatt ctgaacaaga aagaattaca a
//
LOCUS       KCPA01000227             620 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 24887tic ultra-conserved element locus
            uce-7328, sequence.
ACCESSION   KCPA01000227
VERSION     KCPA01000227.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 620)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 620)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..620
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24887tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>620
                     /note="ultra-conserved element locus uce-7328"
BASE COUNT          195 a          113 c          118 g          194 t
ORIGIN      
        1 aactaatgac agcatctgag gaagaagggg ggctttgtgt aaaaagaagt taattaattt
       61 tggggggttt aatctctttt cttttgtacc aaactataaa acaaaaattc ttcgggagcc
      121 agaacatgta cctccagtaa tcgaaagaga ggcaaggacc tgactaatag atattatgtt
      181 ccattatatg gtcttgaagt caataaacat taggttacct tcatgcagtg aaaaaagacc
      241 agatttatta aaaaatctta tctggagggt ttgcatttca ataggatgtg aatttgcata
      301 ttttaacaat aacctcccat cattctgtct gatctgtgct cagttggcca tacagatcac
      361 tttatcttga atagattatc accggtttaa taaacccttc ataatatgca ggtataacaa
      421 tggtacttca ttggataaag aaggcattaa agttcttttt ctggaaatag gggtggccca
      481 gctagtgatt aactttatac ctctgtacat ccctgtgctg aataccgatt gaaggagagt
      541 attcccatta ttcacattca aaatggacca gctcttcaga gctcctgtta actcttcctt
      601 gcccatggca gctgtgcaaa
//
LOCUS       KCPA01000228             683 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 24997tic ultra-conserved element locus
            uce-5412, sequence.
ACCESSION   KCPA01000228
VERSION     KCPA01000228.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 683)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 683)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..683
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24997tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>683
                     /note="ultra-conserved element locus uce-5412"
BASE COUNT          225 a          119 c          109 g          230 t
ORIGIN      
        1 aaaggagtat tttaaatatg ttccatacaa gatgcttctc cattcagagt ttctgacatg
       61 tagacaggag tacttactaa aatattgcag cacatgtgtg agctgggata tagtctatag
      121 cagtgaaaag aggaatcact acatgcaagt gtatattaca tgctgaacta cactgctgta
      181 tatagtatta acttgtactg ctttactcac ctcatacaac agaatccaaa ttaggtccca
      241 ttattacatt gaaggctcac actcaatagc agttaagctt ctttgaatgg attccctatt
      301 gtataaaaac tatgccagtc tttgactgcc aaaatcaatt agtcacattc attatgcctc
      361 tatttattaa tgctgtacac tttataatgc atttgctgct gaacaaagaa agttataaaa
      421 tatcaaatat gtgttatgat tgtaattata gcaaaagaag taatgatctc ttttagtcac
      481 taactggtta caaagcttct gtaaagatta cattagtggt gacagattta tgatcttttc
      541 caagatgtaa tcctttctag ctcacatttt tcaacagagg aactatgtga ttggttacag
      601 gttattggct tcaatagtta tattcagcag agattattgt gcttctgcct ctcataatcc
      661 aaaaacacca tgtaatctta aca
//
LOCUS       KCPA01000229             636 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 25104tic ultra-conserved element locus
            uce-5200, sequence.
ACCESSION   KCPA01000229
VERSION     KCPA01000229.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 636)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 636)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25104tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>636
                     /note="ultra-conserved element locus uce-5200"
BASE COUNT          220 a          123 c           95 g          198 t
ORIGIN      
        1 caatcatcct ggtcaccagt ggccacactg ctcaagtatt tgtaacaaat tagaatacta
       61 atgaagtgtc cttttctcca cttgcaatat tttactacat ataatgtaag tgcatacatt
      121 taatgtatat ttatacagaa ctaataaaaa aattaagtac atttgcattt ttattatcac
      181 tcctttttaa aaagttatta agagtactta gaaaaacata ttgctatatg aattcctatt
      241 tacagtcttt gcataaaggt gtaaataaaa gcaactaata agctacccag acacccttct
      301 gagcaagtgg ctaaaagcca atcaatatta tgagttaatc ctccctggat gctcattcaa
      361 ttaaaggtgt cagtaatgcc tcatctgatg tggcctcaat taaatccagc tatctgatgg
      421 tttaaaacac aaggggatac agcaacagca gcaaaaccag acaaataggc agccttcgtg
      481 tgactgctaa ttactacacc tggtgtatat tatggcttgt gcacttaaca cagcacgtgg
      541 taacttccaa ttcagctgta ttcactcagt aaataatgca actagaaata attctgtatt
      601 tcagatccag gaatttaaaa ccacttagtg ctattt
//
LOCUS       KCPA01000230             388 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 25210tic ultra-conserved element locus
            uce-6035, sequence.
ACCESSION   KCPA01000230
VERSION     KCPA01000230.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 388)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 388)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25210tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>388
                     /note="ultra-conserved element locus uce-6035"
BASE COUNT           92 a           93 c           74 g          129 t
ORIGIN      
        1 cggccaggct gccgcctgct gccgccgcgc gggtaatcac gcgtcccccc tcaccgctga
       61 tttgcaagag cagattaatc agagcgcgcg gcttgatgaa atttgctgtt attgtgccca
      121 tttttagaaa catcttttat tatcttcatt attcatttac aggggaccgg catcaattat
      181 gcaaatgagt tcacagactt tgcagattac ttcatttgcc gctattgttt gtggaaattt
      241 aattattaaa tattattaag cttgcgtttt cttcaatttt ccgaggctta gtttcatttg
      301 atttttcctc cagctgctct cgtttccttt cagtgccaaa acagctcctc atcaaagcag
      361 ctctggcatg tgaagaccaa ataaaatc
//
LOCUS       KCPA01000231             470 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 25318tic ultra-conserved element locus
            uce-813, sequence.
ACCESSION   KCPA01000231
VERSION     KCPA01000231.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 470)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 470)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25318tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>470
                     /note="ultra-conserved element locus uce-813"
BASE COUNT          134 a           88 c           92 g          156 t
ORIGIN      
        1 ccaaacccta cacataacac aagtctgtgt aagtttctgc tggagtttct caaagcccag
       61 gcagtccttt cttgctttta atgaaattcc tttctatttc ttcaggtatg actccccttg
      121 gacatggagg gcatattttc tccttgagtt aggacagctt atgacaaata atgatgagga
      181 atcaatagac aggagggaaa tattgggtga gaggctgaat gaatctcaga gataaattat
      241 tgaccacggg catggccctc tctcctttct cttatatgtt cgtattccat ctcactaaca
      301 acctgaaaga aaatcaaata ttttgtttgg gggcttcact aatatcagca acttttacta
      361 tcttaatggc atttttattg atctcagctt taatgggagc tgtatatatt tgatgttggt
      421 catttaaagt agatgtgagt aatagacttt cccagtgagg atcataaagc
//
LOCUS       KCPA01000232             425 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 25423tic ultra-conserved element locus
            uce-4479, sequence.
ACCESSION   KCPA01000232
VERSION     KCPA01000232.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 425)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 425)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25423tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>425
                     /note="ultra-conserved element locus uce-4479"
BASE COUNT          134 a           75 c           79 g          137 t
ORIGIN      
        1 cttagctgtg tgaaatagta atggattcag acaatttagc ccatgagttt cctttctgga
       61 agagtgggag gctggaaaag taaagcacaa catcagtgga gtatttcaca ttcaaagtaa
      121 atttaattcg cagactggga atggaaatgt cattgcctcg ctcagagggt taatcacttt
      181 ctaatttaaa ctggcaaatt ttttaatgac actgtgaaat taacagcatt ttattgtgtt
      241 aattatctgc aggacactac atcattactt ctaataaatg taaatgtgat tgcctctcct
      301 aggacaatat agagacaagg tgaattttta ttggctattt actcgatttc agacgccccc
      361 accccatgta acgcatattc aatatggttt agtgcactac acatctgtgc attttagtca
      421 ataaa
//
LOCUS       KCPA01000233             635 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 25534tic ultra-conserved element locus
            uce-5314, sequence.
ACCESSION   KCPA01000233
VERSION     KCPA01000233.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 635)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 635)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..635
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25534tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>635
                     /note="ultra-conserved element locus uce-5314"
BASE COUNT          218 a          117 c           99 g          201 t
ORIGIN      
        1 ataaggagca gtttttcagc tggactgaaa acagcacctg acgtcatcaa ctgttacttt
       61 tttaagtttg catttccata aatttatact tgaatctttg ctgtactgca ttcacactta
      121 ggcagctaat ctagggctca gttttaaagt cctatgtcca ctgatgaatc actaaattat
      181 aaaaaaaatg gaatagagag aacaataaat aagttgtgtt taagtacctt attaataaat
      241 cctgcaattt acaggactat aagcactagg tttacctgga tagatggctt gtttaagtga
      301 cccagatttg aagttgtttg tcttggttca tgtcctaaga ccatcatatt agcattgatc
      361 aatctgaagg catcaataac aacctgtaaa aacaagatgt caagtcaatt ctttttagaa
      421 aatgcaacta atagagccaa gcaacagtgg acaaggcaca atcaactctc atctgttttt
      481 ggcctttatc cagaaaatca tttaattata atattaataa aaaagaacct cctgctggcg
      541 atcagcacac tatactacct tgaaggtgac accaattatt accttttcca tggaactgta
      601 agtttcatat acattatatc accatataac attga
//
LOCUS       KCPA01000234             598 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 25642tic ultra-conserved element locus
            uce-4477, sequence.
ACCESSION   KCPA01000234
VERSION     KCPA01000234.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 598)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 598)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..598
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25642tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>598
                     /note="ultra-conserved element locus uce-4477"
BASE COUNT          176 a          129 c          142 g          151 t
ORIGIN      
        1 cttaataaag ccctgctttg ttagtgcatt aaaggagcac agctgagcac acacttgagt
       61 ctcagcgctt caggctgtaa agcacctaaa acccaactta gttgctttta ctgttgcttt
      121 tcctctttgt gctgacgctg ctgtctaaat gtatccagag agtgtctcca ggagagaggg
      181 aatggagggc gccaatgaag cggagatata cttaatgcag acaccattaa taaatcactg
      241 atagttaaga tatagattgg gtgatgggtg gcagatggga aggaggaatg tcaaattgct
      301 tttctcatat agattattgg attaacaagg aagcagcggg catgtggcaa accagtgtaa
      361 caaattacta tcataaaaaa aaaagataga gctcatcgca ggctggtaat aatgccatgt
      421 cggccattag ctctctggag aggtacttag agcacaacat ccgtcttctg gaaaagagac
      481 ggccactgca acaccagagt gaaggaggcc cccgtttgct tctccctccc cccctctgac
      541 actagagcct gtgctgttga agctacagca gctgtaatga ataatcacca cagctttt
//
LOCUS       KCPA01000235             408 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 25748tic ultra-conserved element locus
            uce-1462, sequence.
ACCESSION   KCPA01000235
VERSION     KCPA01000235.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 408)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 408)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25748tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>408
                     /note="ultra-conserved element locus uce-1462"
BASE COUNT          128 a           59 c           84 g          137 t
ORIGIN      
        1 cctagatcag aacatatcat tagctgtgtt tcttagtgaa cctgactttt ctcaagaaat
       61 ttacatcttt ctctcatttt ctgttaaggt ttcttaccct gttttctcac ctaaagaatt
      121 ataatgaggc agagagaatg agatctgtgg ggaaagcagt ggacctagag actaaaggta
      181 aaaggatgat tgatggtatg aaattaccat aaaagtacaa tcaggatcag attttaaaat
      241 gaatttttaa gcagcctaag agatactctt tgatttgtag tctggtggaa tggataatgt
      301 ctcattcagt ggataaagtt tctcactgtg tgacttgagc tttttctgat ctttctgact
      361 gggagtaaaa tggaaccaaa gcataaagtg gtttttaatg ctgaaaat
//
LOCUS       KCPA01000236             716 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 25857tic ultra-conserved element locus
            uce-5925, sequence.
ACCESSION   KCPA01000236
VERSION     KCPA01000236.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 716)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 716)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25857tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>716
                     /note="ultra-conserved element locus uce-5925"
BASE COUNT          204 a          163 c          148 g          201 t
ORIGIN      
        1 gtgcctcctg aaacagccgc aggatccgac cttggagcac agccatgcag ctagcactgt
       61 tcctggggtt ccctcagtag ctaataccat ggatgaccag gtaactgggc acattctcta
      121 tacacttgat gataaatatc tacagggaag aaaggggggg actcttccta ctgtcagttc
      181 ttctctgccc cctatggagc acaggcagcc tctattctgc cggtccattc ttccacatcc
      241 agtgcattat tatgaaccct ccagcacaca cagctaatta gagaaaatat cctttctagc
      301 aatttaaatg attttggcat tttcaggagg gcacatgtaa tattcaaatt acttccactc
      361 tgcgctgcct tgtcttgcct ggctcatctt cccaggtgaa tttgtagtct ctgaaatgct
      421 ctaatttccc acacaagcca tgtcaaatat aattttggtg caaagttggt aattatacgt
      481 aacatcagtc tgatgttaaa aacactgaaa aatttagcaa gaagagacga atggagagac
      541 ataagactga ggccaaggaa cgaaaggcgt gcagccccct tagtatttgc gctcattaat
      601 taataatagc atgttttcag gaactgaaag gatgtgtttc ctgaactgac tggaattcat
      661 ttatgtccca attacattgt ctcagtaaag aacattggtc aggtcttgct gaagag
//
LOCUS       KCPA01000237             523 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 25967tic ultra-conserved element locus
            uce-3290, sequence.
ACCESSION   KCPA01000237
VERSION     KCPA01000237.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 523)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 523)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25967tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>523
                     /note="ultra-conserved element locus uce-3290"
BASE COUNT          113 a          156 c          144 g          110 t
ORIGIN      
        1 ctcatggagt gcctccccct tttcccccca ccttggggag caccaagcag gatcactcca
       61 aaaccacgct catggcttgg ggatgccgcc atgccaggag ggttctgtgg gagcgggatg
      121 cccctgccat gcctgctcct gcctggctcc cagcatccct gcatcccgcg gaggggttgc
      181 ggcaatggca gtgtaattaa aaacgcaatt aagcgctgcc acttagcaga aaagtcatac
      241 agtttgggga taattatctg acaatataac aagttgccca acattaatca ggcgctgatc
      301 tgctccggca gctgtgctcc cagctccgga cgctgtctta atggcatcct ccgagagaca
      361 gcaataaatc aggcccttac gggggcagca cactgtcccc tgcctgctcc ctgcctgcgg
      421 ggtgtcaaag caacatcctt actttgatcc tgcctgaggg tgctgaaaga gcggggcagg
      481 ttccagggga tcagtcctca ccctaagctg aagggatggt ggg
//
LOCUS       KCPA01000238             660 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 26078tic ultra-conserved element locus
            uce-4014, sequence.
ACCESSION   KCPA01000238
VERSION     KCPA01000238.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 660)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 660)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26078tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>660
                     /note="ultra-conserved element locus uce-4014"
BASE COUNT          183 a          118 c          139 g          220 t
ORIGIN      
        1 gaagggtttg tacaatgaaa caattacgca gtgcaggtat tgccattact taactgtggc
       61 ttgtgttgta tgtgcacagg acagtttatc aggggtcttc atgagggcac cccactggca
      121 ctgtaatggt taatgcctaa agccttggct gagatccttc tgctgtttga tggctcaact
      181 gaagcttgat gtttatggtg gaaattgtct tgatttcttt agatgagatg agcatccatg
      241 gagtttgaaa atgtgtttta attaagattc tgctaaattc taccagacac ctacttggaa
      301 aacaaagcaa ctgaataatt aactctgatg agagcagatg ctgctctaat gacaacctgt
      361 tactgctcaa gtgcatcatt agttgtttta ctatgttctt ttaatatgtc cagagatcct
      421 cagctaatga atacgttggt agcaatgcat ctaaaataat tcttcagtgt ggactgttaa
      481 agccaacaac caaatcaact gaaatagtgt ttccgctgct ctgcgttctg tgtgcttgaa
      541 agcaaacact tctttagtta tccttgtggg attattttag ccatacatca agtgaagctt
      601 acgaattgat gagaatctaa tgatgcattt atttacagat gtgcagttct gttccctgtt
//
LOCUS       KCPA01000239             513 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 26184tic ultra-conserved element locus
            uce-4943, sequence.
ACCESSION   KCPA01000239
VERSION     KCPA01000239.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 513)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 513)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26184tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>513
                     /note="ultra-conserved element locus uce-4943"
BASE COUNT          186 a           85 c           78 g          164 t
ORIGIN      
        1 tattctatac atagtaattt atcgtttaat atattaaagg ctgcttaaga caaacaaaat
       61 tcctccacct cttggttttc tgaaaaattt actggatgct caatatatat aatattcaat
      121 agcatgtgag aataattttt atgcaactgt gatagttaga aagatagata actcaattat
      181 tagatcatct atcaaaatat tcagatgtgt aagaggctac taaaaagatt gatgactaag
      241 aaagtccact gattctctag ccatcatatc cacacatttg gctagacaac atttttcgct
      301 gccttcacaa gcaagcttca ttacccatca ctccactgaa aagagtttat tatgaggctg
      361 ccatcttggc aagactatta tttagatgat aaatgctggg ggaaaaagtg tgtctagaaa
      421 catgagcttt ttgacagata aaacaaacag catctacatt tctaattaac ttaaatttgg
      481 catatacaaa tataggtcag taaagctatg ata
//
LOCUS       KCPA01000240             739 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 26291tic ultra-conserved element locus
            uce-4672, sequence.
ACCESSION   KCPA01000240
VERSION     KCPA01000240.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 739)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 739)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..739
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26291tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>739
                     /note="ultra-conserved element locus uce-4672"
BASE COUNT          198 a          143 c          168 g          230 t
ORIGIN      
        1 attaaacaag aatttatgga agttcaagct ttacacagca ttcagctgca agctcttatc
       61 attcatgtaa attttacaaa caaggaatgc agcagttttc aatcttaatg aaatataaga
      121 atgttttttc attcagtatg actcacggtt tcgttttgaa gtttttcagc ttctcctaag
      181 gttatggagt ggtcaagcaa agcggaacag ggtttttgaa atcaggaagc ctgggcgctg
      241 tttcattcag gggagagcga gagagggagg gagcctattc ctgtgtttga ttgaaaaata
      301 aaactgctgc tctcagtgaa cctttgaagt cccccagccc agtaattgtt tcacgacatt
      361 tgcagcttga ggcagcagga atgtttgtgg ttgttttaaa ggcatctgag tgtggattcc
      421 atatgttttt atttgcttcc ccacttggag cctcaagttc ttgcgcattg cccgataccg
      481 ggtcccagcc tactctatga actgtctgtg aaagagctga gtgaaggcat tgtggcccta
      541 agattcaagc gtgcttaatt cagagaaaat ctgtgaatgc ctgttgaggc aatagttgat
      601 tttagccgcg ctttatcgat cctatatttg gagtgtggct tactaaacac tgtacagttt
      661 gctttcctga acaaaagacc tcttcatatg gcctatactt agggcatgat actccaaacg
      721 ctcactatag agcatagtg
//
LOCUS       KCPA01000241             851 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 26400tic ultra-conserved element locus
            uce-2069, sequence.
ACCESSION   KCPA01000241
VERSION     KCPA01000241.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 851)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 851)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..851
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26400tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>851
                     /note="ultra-conserved element locus uce-2069"
BASE COUNT          301 a          167 c          184 g          199 t
ORIGIN      
        1 atctgaaacc tttcctggca tatatctgtc ttcctgacac gtctacagca gatatctgtg
       61 ctagcgtgga taattatctt agtctacatt gctctataaa taaatgcttt aacaaacatg
      121 tcagagtagt ttttactaca ggcatttgga ttatcagagt aggacacaca aaatacacgt
      181 aacaaccaaa aatttagttt ctttagcagc aaaggtgatg acactatttt gtgaaatgca
      241 agtctacatg agatgggtaa atcatgcaaa gcaaagcaac agcagaaaaa aaaaattaaa
      301 gcaagtaaaa gctcttactg tgcaacaagc tcgccaaagt tttcatcagg gcagtatttt
      361 cgaggacggc ctcgttgaat atgacggcca cgtttaaact cttcatcatc aacagtccaa
      421 aaggacccaa actcatcctc tactctgata aagcacttat gcagtgagag gttggtgcga
      481 atggcaccct gggacaagag cagcagcaaa ggagatgaag tggaaacaaa gggacacggg
      541 atcggggaca gaacagacat caaatacagg gaaaaggaaa aagaaaataa aatgcaataa
      601 gcataagcaa atggtttgtg agggttaata tgcattgcca cctaaaagct actagcatgt
      661 gatgcaacaa acaccaagca agcagggtca gggtactggt gggcatacaa acagtagtga
      721 tgagatgttt gtcttggttt cccttaactg aaacaatgcg aaaccacctg tggttggtct
      781 aacaccagct agcagccaaa agcctctacg ttaaactgta agcatgatcc gagctaggct
      841 aagaagttca a
//
LOCUS       KCPA01000242             625 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 26506tic ultra-conserved element locus
            uce-7615, sequence.
ACCESSION   KCPA01000242
VERSION     KCPA01000242.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 625)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 625)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..625
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26506tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>625
                     /note="ultra-conserved element locus uce-7615"
BASE COUNT          209 a          119 c          108 g          189 t
ORIGIN      
        1 agaaataatg acaattcaca ccctctctgc gagcaatcca gaggtgacag gaacaaattg
       61 atggagacag aaatgggaga atcccaccct gtcagaagat gaatgagctg agcttgcatg
      121 atgtgaacca tggctgacag aagcgagggg gaatcaaaga gtttttgaca acacacgctt
      181 cacagctctg accactgagg atctacatga ttatctccag acaaaataac tgtgagtaaa
      241 aggcttacat acacttaaat taaacacagc agggttttag taatctctgt ttgcatttta
      301 ctttctggaa attgcttgga ctgggaacgt ttcatttaat ggcattttta gttacctttt
      361 gtacttctaa tgccatagtc taaattcacc tcaaattacc caaaaagaaa cttttgtcct
      421 ttatttttaa ttgctgtagc ttccttacca attttactaa attaaatgtg ttttaaaaca
      481 tcaccgtatt tgaaacctaa ttatcccaat ctctgaatga agaatagcta acaatacaaa
      541 ccccatttat gtaatttatt ttgcaaaagg aaataaatgg aatgcagttg cagtaatgat
      601 atacatgttt gcaattccac cctgt
//
LOCUS       KCPA01000243             664 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 26616tic ultra-conserved element locus
            uce-6250, sequence.
ACCESSION   KCPA01000243
VERSION     KCPA01000243.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 664)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 664)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..664
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26616tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>664
                     /note="ultra-conserved element locus uce-6250"
BASE COUNT          184 a          120 c          121 g          239 t
ORIGIN      
        1 aagtttctga ttaattattc atctcctcta acgtttgaag ataggtctag ataagtttaa
       61 ataaaaaaca tcagctgaac agtgttggaa ggttctgtgg ggcacctttc tggtacctta
      121 cttatactgc tgaggttatt ttgtcaggtt tgtgtcagac tgtctttccc acattttgca
      181 ggtcattgct gcagtctctg ataatcttac cacactgact ggctgcagtt attacccttt
      241 atatgaagga tctatgttga aagccagtta tgagtttctg tcccagtgga ttgcatgatg
      301 aagttgaagc aggctgtcat ccaaagctgt ataatagcct cagctgggaa atacaaaagt
      361 gccatggatt attgatagag tcatatctgc agttctgctg acaaatttga tgcctctttt
      421 gctaggtttc tgttattaag aaatacctct cttatgtcac ccccttctct ctccctgagt
      481 gttccatttg gcttggatta tgatttggct ttgtgcctac ttaataaccc taatgttaca
      541 aattatgaac ttaacaaagt ctaatgatct taatttaaaa gccctaggag tataaattta
      601 acagacattt aaagttattt tttatttttc aaagtgcttc ataaagcatt aaaatgtatc
      661 atat
//
LOCUS       KCPA01000244             662 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 26724tic ultra-conserved element locus
            uce-6905, sequence.
ACCESSION   KCPA01000244
VERSION     KCPA01000244.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 662)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 662)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..662
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26724tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>662
                     /note="ultra-conserved element locus uce-6905"
BASE COUNT          190 a          134 c          155 g          183 t
ORIGIN      
        1 cttgacgctt tgagcagggt aaatgggaga tgcaaaagca ctttgcagtg ctcagggaga
       61 tgagtgcaaa tgggaagacc atggcaagtg ctccctgcct gtgcttcaag gtaacccctg
      121 ccagcgtgcg ccgcctcctt gcaaatgcca tacagcgttt ttcactctct gctggaggaa
      181 aaagctgccc taagaaaagc agaatgaggg ctgatgtttt gaaaggtgtc caagagtaac
      241 aaaactcaac tctccagggc tgagttttgc ctcttgtgtt tctcaactag ggtggttgaa
      301 tgtgttacag acctatcaga aattttgcta caaatgcgca aatattaatc tacagccatt
      361 tcctttgctt tcttaaacat gaatgaggat ttttgtctct ttctccctcc ataaattgtt
      421 catggtcaga gggggcatgt tccgtgtcaa agtcttgacc gccaggatca aacaaaaaac
      481 ccttgtgaac tcaaaagtgg agacaaataa atgactatta cttttttcct tttgcctgga
      541 gttaaacctt ttctctgtca acaatattga ctttgttcac ttggaaggaa acagagggag
      601 agagagagag ggagatttct ctagatgctg cacagaaaaa aaacattttg gaaggaggaa
      661 tg
//
LOCUS       KCPA01000245             578 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 26833tic ultra-conserved element locus
            uce-5323, sequence.
ACCESSION   KCPA01000245
VERSION     KCPA01000245.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 578)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 578)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26833tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>578
                     /note="ultra-conserved element locus uce-5323"
BASE COUNT          169 a          110 c          123 g          176 t
ORIGIN      
        1 ttacggtggc taagatttct accttttatt tttgaatgtg aggtaaaccc ttgccctcta
       61 accccatccc tctttccata aagcgtgtat gtaaaatttt catttagcat ctttagcaat
      121 cttccattgg gtttgaatag tacattttca tttcattcat catttaaaga cagataatca
      181 gaaagtcatt acatgggctg acaccgggcc ccgcgctcga ttgtattgta attgagcact
      241 gcagagcgtg tgccagatct aatggataat gaatatatta tgtcagcaga accgcctcag
      301 caaagctcct ggggaatcac agggggactg cagtgacatg gagggtcaca gatgttgtgc
      361 tgatttactg atggagtgat tgtgtaatta ggtaatcaat ggtgggtaga ggactatatg
      421 tggacagcta attttataca aataaagacc atacgtagga ggctcatatt taggacagtg
      481 taagatgatt ttggtttggc ttaattattc ataaattctt aaccagaagc agaggtctga
      541 ctccaattca aacactacag cagcccactt tcacaaac
//
LOCUS       KCPA01000246             354 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 26929tic ultra-conserved element locus
            uce-3836, sequence.
ACCESSION   KCPA01000246
VERSION     KCPA01000246.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 354)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 354)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26929tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>354
                     /note="ultra-conserved element locus uce-3836"
BASE COUNT          117 a           57 c           83 g           97 t
ORIGIN      
        1 aagaaaagcc aattcatcag gtaagaaaga ctgctgctca cactctcaag tcctgccaaa
       61 gacaaatggc tgtaaaaatt taaaatcaat cattaacaga ttagctgttg gtccaaagta
      121 aatagcaatc agcttattag gcatcaggca gagtgagata aaggggaaga gttattgaaa
      181 atgaggatgt ttgctggggc tgtgctgatg gagcagaaca gggaaaggct gtttctttgt
      241 tgctctaatt acaaatggaa aataacctac agtgctgaac aagttgagct ccctagctga
      301 attgaatgga gcatagtgct tatgttctac gtcatggctt gatttatctt gatt
//
LOCUS       KCPA01000247             429 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 27037tic ultra-conserved element locus
            uce-3316, sequence.
ACCESSION   KCPA01000247
VERSION     KCPA01000247.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 429)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 429)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27037tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>429
                     /note="ultra-conserved element locus uce-3316"
BASE COUNT          108 a           86 c           98 g          137 t
ORIGIN      
        1 gctccgagca ggaatttcca tccccagcgg aatatctgct ggtggcgcgg agtgtggttt
       61 tggtttagta gttacagcgg catcctgtaa tcatttacag cccttggaat gtatgggtga
      121 aataggagag atttatctgt tcatagttgt gatatgtaga caatgggtgt tcctaatgag
      181 gaacatctgc ttttgtgttt tcccagaaaa cattattcca ctatgaaaat gatactccca
      241 tccttttcag caacaccgca aagaaaatat gggccttttc ctttctttta tttgcttttc
      301 tttgggtcaa tctaatttcc cagggacact ttttactgac tgcggggttt gttctttaac
      361 acgtgaggta ccgtgctgga ggaacagccc cgaatgccag cagatactcg aatgtgtaca
      421 gtaataaaa
//
LOCUS       KCPA01000248             559 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 27148tic ultra-conserved element locus
            uce-2288, sequence.
ACCESSION   KCPA01000248
VERSION     KCPA01000248.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 559)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 559)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27148tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>559
                     /note="ultra-conserved element locus uce-2288"
BASE COUNT           84 a          171 c          104 g          200 t
ORIGIN      
        1 tgtgtgccgt ttccagctcg ctgcatgcac ggcacaggtc agctcgcctg tggtttagcg
       61 tggctgtggg aagctgccgg ctcctgtgtt tagctgcctt caggcctagc taagccgagg
      121 cagtgtctgg ctccccagcc acaatctctc gttagaaaga aattaaaagc cactcaattt
      181 tggctaatat ccctctgtag gcctttaact ccacctgtga ctaacccatt cataatagct
      241 ctgttttagt ggcttgggtt gatgtatcct cgattaattt gggaggagag tggcagggcc
      301 atatctcttt gtctccccct ctcttaatcc ctgtcctaca gtctgtcttc tcccactatt
      361 tcatctctgc tgtcacttct ccattcattc accctcttct cgactttttg gtgttttttt
      421 ccccaactcc tgtttgtctg ccttctccct ttgttctcct catgtccttt aaccttgctc
      481 tttcctcctc ctcttggccg gtattgcgtc cttttcaact ttgctttcct ttctcatccc
      541 ccctcatttg gactccttt
//
LOCUS       KCPA01000249             661 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 27253tic ultra-conserved element locus
            uce-1928, sequence.
ACCESSION   KCPA01000249
VERSION     KCPA01000249.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 661)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 661)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..661
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27253tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>661
                     /note="ultra-conserved element locus uce-1928"
BASE COUNT          219 a          103 c          139 g          200 t
ORIGIN      
        1 tatgaaatta gagagggaaa tcaaatcaat agtaggtcca gcaggagact gtgttctatc
       61 cttggatctg tttgcaggca tgctggttgc atacagatta gctgataaat ggttgattca
      121 atagactggt agcaaacaca tgctttgcta gagatgactt tttaagtcat catacatcaa
      181 acagacagtg tcagcctttg aggataaacc agtgatggct tgttgtgctc tttgaactgc
      241 ctcggagacc cagagactaa gtgcctgaat gtttccctga atccactggg aggactgaaa
      301 gcttcaaaga gtaacactat cacatccaag gggaaatgca ttgattgaag gaaccagtgt
      361 gaaatagtct tttataatta ccagaatgct agaatcgact ggtgttttgc tgagctatat
      421 tttatcttta ttggattaac tgtgacacag taggttatgt caaagggaat ctgcatgaat
      481 attaaaagta aatgtggtgt gaataataga taacttacat tagatgcaac agcatgcagc
      541 aatttttatt cacctatgta attagattaa aacaaatctg ctgaataaag tatattgtct
      601 tattataatc caaatttaaa agtatcaaga agttatgaaa cggggataat tgctacactt
      661 c
//
LOCUS       KCPA01000250             799 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 27363tic ultra-conserved element locus
            uce-1202, sequence.
ACCESSION   KCPA01000250
VERSION     KCPA01000250.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 799)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 799)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..799
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27363tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>799
                     /note="ultra-conserved element locus uce-1202"
BASE COUNT          257 a          144 c          128 g          270 t
ORIGIN      
        1 tttatattta tgattttctt acaaataaat aaatatatac tatagctaaa agatatttca
       61 gctttactcc ctagtcagaa ggtaaacttc tatattttgt tattgatgta acttgaaagg
      121 tacatgttaa gcctttaaag aacatttaga attaaacagg ccacattcaa agtaaattat
      181 ctaaatagat tttggaaaga gaaaagagtc tgttcatttt aatatacctt cagaaatatt
      241 ttacttcttg atgatgacag cagctcttac tgacaactat taatacatta taaacacccc
      301 atcagagtta tataaaaaca tgtcagtttt aaagagaaca tctttgacag caaattttct
      361 gattgtgaaa cagctgtgcc tccagtacaa tgcattaagt agtttattcc ttttagatag
      421 ttaaattgtg catgaaatgt tgctggcgca agggctccaa atctggcctg attagcgaac
      481 atctgttaca ttggaaaaat tcatgtctac cctaattagc tgtcaggctg atgtacatca
      541 gccctgatgg tgagggatcc tgtgctgttt aagtcaaaca ggtttctctc ctatcccatc
      601 acctgccctt tcaaatcttt tcctctggtg tgttgctgta attagagatt gttggaaata
      661 caatagagca ggttatggtc agttatagtc ccatctgtgc aattttttta ttcccacaaa
      721 acttacaaac tgacataaag cagtcctagc agtcaggctg aggtctatat atttttctaa
      781 acctaatcca ctcactaaa
//
LOCUS       KCPA01000251             642 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 27475tic ultra-conserved element locus
            uce-227, sequence.
ACCESSION   KCPA01000251
VERSION     KCPA01000251.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 642)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 642)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27475tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>642
                     /note="ultra-conserved element locus uce-227"
BASE COUNT          178 a          145 c          123 g          196 t
ORIGIN      
        1 attttagagc gtggttgcac tgcaggttga agacctcatc tatcacccat accaaaagac
       61 ataccccacc ttgttgagtt agaaggtaca ttctctcccc tgcagcgaac tggacatttt
      121 ctatgcgccc gtgtccccgc acgtgcacgc gtgtgtgttt taagccggca agtcgctgta
      181 cagatactta ttctctacac cacttccctt ttgaaacatt aaactgacac tggaactgac
      241 tgcacaagat tgcattttct cttcctaaac aacttgaatt gaaaggttac ttagtgtaac
      301 aatatttact tgcagaattg tgttgttacc aagggtataa tggatggtgg ctatgcaggt
      361 ttacgcaaga atgagtgaag catgaggcat tagccatgtg tttgacatgt ttcaaattgc
      421 tataatccag cattaaacac acccagcaat tcatgccatt tcttgcagcc ataatcttga
      481 ataaagcgtg cacaaccact tattatataa attagtatat gactccctgt tatagtcaca
      541 acagtgcttt tgtgtttatt ttgcatcaag acggggtctt ttatttgtac aaatagcagg
      601 atagcgcgcc gtgccgcaat taaacctcct ccgtttatga ca
//
LOCUS       KCPA01000252             515 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 27583tic ultra-conserved element locus
            uce-251, sequence.
ACCESSION   KCPA01000252
VERSION     KCPA01000252.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 515)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 515)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27583tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>515
                     /note="ultra-conserved element locus uce-251"
BASE COUNT          135 a          124 c          106 g          150 t
ORIGIN      
        1 tctctgtgtc aagactttgt attaaaaatc ggtctccagt gcccgtgtct tttaattcat
       61 tgcaagctgt aggccatttg ctcacaaagc gcttgcagta aaacaaatga atagctaaaa
      121 tactcatttg catgattccc atttgaaaac gattcccctg aaattaagga agcggttgcg
      181 aagatggatg ggcagatgag ccgtgcaatt aatatttttc ggcgttctct tttaaagccc
      241 tcctaagact cgagcagcac atgctgcctc ccagacaaat tgggtttcca gggctgccat
      301 ggcagcagct tgccccttca ttgtctcact tacattatgc agtaattaaa actatttacc
      361 attcctactt atctgccatc tgctgccatc gaagtttcct ctccaaagcc atcttcggag
      421 tcaaggacaa ggacctgctt ttattaatag gtagtggacc aggacggttc cacggagagt
      481 gtcatttaat gggatttaca tccggccacc gtgac
//
LOCUS       KCPA01000253             501 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 27693tic ultra-conserved element locus
            uce-7022, sequence.
ACCESSION   KCPA01000253
VERSION     KCPA01000253.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 501)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 501)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27693tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>501
                     /note="ultra-conserved element locus uce-7022"
BASE COUNT          152 a           90 c           86 g          173 t
ORIGIN      
        1 gcttttaaaa ttgatagtgc ctgtattcac aagggattaa ggaagaaaat aagtatacat
       61 tttcacagcc tttaaatcat ataatttgcc actgaaatta atgtgtatca tcttgaatta
      121 ttatttgatc ttatatgtaa gtgctctgct atttaaaagg agtcttaata acaaatttac
      181 caaaggcagt tcaaagccct tttatccatt agtatctccc attttcattt cattgctttt
      241 gttccttacc accttcttca tccagaaaaa taagtgtgtc gcttttgaaa tggaaaaatg
      301 gtttcaaatc actggcaaag cttaatgact tctgactgct gagatatgtt aatttaagcc
      361 agaccaaatg ttcctcagct gcaaatattt ggtgttgttc actgggaact ggcaagattt
      421 atgagggccc agtggcaaag gctctctgct cacatgcctc acattacaat tgtttcacgt
      481 tagatgataa aaggctgttt g
//
LOCUS       KCPA01000254             785 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 27803tic ultra-conserved element locus
            uce-6807, sequence.
ACCESSION   KCPA01000254
VERSION     KCPA01000254.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 785)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 785)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..785
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27803tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>785
                     /note="ultra-conserved element locus uce-6807"
BASE COUNT          248 a          164 c          128 g          245 t
ORIGIN      
        1 tgtcaaatga atatttataa caagtggctt tcccttcaca aacactataa ctcaagcagc
       61 tctcattcat tatcgtattt aggaagtaca aatactaatt ctgtgaatca gcagcacagt
      121 ctgttgtaac ttgccagaaa acaaggcctg caaaaaatct aggagaaacg tgctgttgcc
      181 tccagttttt caaatctccc agtcaccgga attcggtttc aatattctat ctgcccttca
      241 gcatagcatg ccccaatgaa acagccggtg gagtttattt tgcactttat caatacagtg
      301 taaaccagca tgtgcttact tccatggggt tactgaaccc aacttgtctg tgtgcacaga
      361 cagcactttg gccacagatg tgactggtta actgtacaag caaggaggat aaatccacac
      421 aacaatactt cattcaccaa ggaaatctgc tgtggattac agcttctcta tggttacgtc
      481 tgttcttaat ttactgcttt tattcagttt tcaaccataa atgagcccct tatgaggtat
      541 tcactatgaa gaattgacaa ctctttttat ctactcgaaa aatatttttg gataataatt
      601 tatggttacg aaatatttta agcagtttga atagttacat tatattcttt cagtacttaa
      661 tgatgcagta tcccctataa aaatggagac ctggcaatct atcgatttca catatttata
      721 acaaaaccca gcagcctcgg ccatacagaa atacaaattt taaaactgca tatatcatgg
      781 gaatg
//
LOCUS       KCPA01000255             680 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 27907tic ultra-conserved element locus
            uce-4211, sequence.
ACCESSION   KCPA01000255
VERSION     KCPA01000255.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 680)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 680)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..680
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27907tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>680
                     /note="ultra-conserved element locus uce-4211"
BASE COUNT          205 a          161 c          124 g          190 t
ORIGIN      
        1 gggtaccttt gttcatagtg cacatctggc accgccagct ttaactttac cctcaacacc
       61 ctccgtccat gctggcactt ggcaccagtg gagcacgggc ttgactggga tgctaaatcg
      121 tcaatatata ggtgtatttg gtaaacttcc caaaaagcac aatttttacc ccaacaggaa
      181 gatttcattt gatctgcatg tgactgggga gctgatttca tttcctgtaa aaccccctca
      241 aataccacaa agttacctga ctcagctgct tgtagaaatc aaattcagtc caagataaca
      301 gctaatcatt tgtcacagta agaagcaatt ccctgaaatc ggaagggaaa acctgccgct
      361 tcaatccgca ggtctgtcag attgctagaa attacattct gctctgacta acctctgcac
      421 ttggattgct aacaacaagc agcctggtct atcaaaagag aatatcatac aaccaggaac
      481 agcttttgat ttgttctatt ccaataacct gagaaaagtt tatggacatg cattgctgcc
      541 tagacctcaa ttttcaccaa cctgcatact ggttggaatt tatagctcca catccccaca
      601 gtaatgtagg taaaatttac aggctgatta tctgctactt cataggaaga aaattagagt
      661 tgattttata actgcacaac
//
LOCUS       KCPA01000256             590 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 28011tic ultra-conserved element locus
            uce-5102, sequence.
ACCESSION   KCPA01000256
VERSION     KCPA01000256.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 590)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 590)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..590
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28011tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>590
                     /note="ultra-conserved element locus uce-5102"
BASE COUNT          201 a           96 c          123 g          170 t
ORIGIN      
        1 aattacgggc tgcatttctt tgctcatgtg ccctgcactg ggtaaaatgg aaaggcagca
       61 ctgagaatgc ctgagcatat gagaggctgg aagacagatt ttccaacaga acaattgcag
      121 ggtgtaggtt ttaggcaata agcaggtagc ctcgttctct caaaagaaga aagaaaataa
      181 tggaaaactg taacattcat ttggaggcct caaaggcata aaaaacccaa ttccaactgt
      241 tataggtccc tgcaggagtc tacaaaggaa ctaagctttt taagtaagaa aactagattt
      301 tggcccagag ggccctgtca ttgctgctta atagatgaaa ctcttttgat acaaatatgc
      361 tgtttacttc tcagcttcag ctttcataaa atataacctt tttatgattt acgacccctg
      421 aaaaagtgca ggatggattt ttagctctga attggttgaa tgtcaacaag aaaaatatag
      481 ataacatata gaaatagcag ggtgttaatg ccacacaaaa tgatgaaatt atttttgttt
      541 agaaaagtta agtttgttct taaagttctt tctgagtgaa actgaggaaa
//
LOCUS       KCPA01000257             503 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 28116tic ultra-conserved element locus
            uce-5041, sequence.
ACCESSION   KCPA01000257
VERSION     KCPA01000257.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 503)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 503)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28116tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>503
                     /note="ultra-conserved element locus uce-5041"
BASE COUNT          183 a           79 c           78 g          163 t
ORIGIN      
        1 attgattaca taagtgggca gtggtggtcc tttcaagtat gttccttttg tttcagcttt
       61 acagtaaaat taccagcagc agtttacaat taagggaaat aataataact gcatatgctt
      121 tcatctgcac atacaattac aataaactgc ttgctttaat aggattgtga aaaatctatg
      181 tttgacccct acaaaaaagt aaacattctt gttctggata gtatatcatt atcacaacaa
      241 aggaaaactc ctgaaatctg atgatttaaa catctggaga atgttaatca cttcaaaatg
      301 acggatgttt tttatttcag cttttgacag acacactcct ttcatagata gatgattatt
      361 tacataaatt acatcaccaa tgtgaatcca aaataacttc aaaggataaa gtgcttaatt
      421 aaaaggaggt ttttacattt cttctgttgt agaacataga agaaatagaa gaatttgcaa
      481 agggaaaatg aacaccacca ttt
//
LOCUS       KCPA01000258             540 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 28225tic ultra-conserved element locus
            uce-336, sequence.
ACCESSION   KCPA01000258
VERSION     KCPA01000258.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 540)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 540)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28225tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>540
                     /note="ultra-conserved element locus uce-336"
BASE COUNT          172 a          123 c           71 g          174 t
ORIGIN      
        1 gaagttcaga tgagttcaga tctattcaag ccctatcaat gtttccatat gcttgactca
       61 agtccaaaca tttaatcgtc agctccaaac ccaattgtga actctgcttt ccagcactaa
      121 ggacttgagc actataatct gtcatttgta ctttttcata ctaaaggtga cagtctaatt
      181 cacatatgac caacacccat aaatcatgct ggggggagga aatattcata aatccatatc
      241 aaacagaacc caaattatga caaatgacat ggcagtcata aaattgcaca agcacaactc
      301 accaagtcat taatttcatg gccgtggaaa ataaacagac acattttttt cgcagcccta
      361 ataaatttta aaaaactcaa agaatggtcc atctgcttcg aataattttt aatttcctat
      421 tctgtctcgt tcccattagc tattccactg agatatttgc taaattcttt catttgcctc
      481 ctcccatctg tattcaatta ctctattccc aaatagagtt agtttttctt tctcctaagt
//
LOCUS       KCPA01000259             822 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 28338tic ultra-conserved element locus
            uce-2857, sequence.
ACCESSION   KCPA01000259
VERSION     KCPA01000259.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 822)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 822)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..822
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28338tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>822
                     /note="ultra-conserved element locus uce-2857"
BASE COUNT          240 a          137 c          153 g          292 t
ORIGIN      
        1 ttatcacagc atttaaaata aactcagtta aaagtggaaa cttaagtgga ctcttttttg
       61 cagtttggtt tttgaagtgt taggacaggg tctaattgaa acgctgaact tcatgtgcaa
      121 cagcctatga atataatttc tactgattta agaatctgat gtcagggcag taagtatgca
      181 attagcttta gtttaagtga tagcaacatg ctgtaaataa gaatcttaat tgtgtttgca
      241 agattaaaat tcagtttcat tgtttttttc ccttgcttct ttggtggctt tgtggtatat
      301 tcacattgct acctctaaat gaatgtcaac ttgttttacc tcgactgcag ccaatcgata
      361 cttcattagg ctgaattgtc ttgtgcccat gcaaccttga agctgtggct taattaccac
      421 ccgtattatg cagtggctca gagtgctgtg ctcagctgtg tcagtttcga acaaaagcca
      481 tgctgttgcc tgtatttagg aaaaatggac ttttgaacta aagaatttta atattttcta
      541 agttaacaat tcatgatgat aacctttttt ataatgtgtg tgtcagtttt cagtaagttt
      601 acatttgaat aggtttctgc atattgcaaa acttcaaaag aggagtacct ttgcttttca
      661 tgttcaaccc atctttgatt taagataatt ttaaattaat ggctaagtaa cattcatctg
      721 aaggagaaga caggagaaag tgcagtcaaa tggcaatcat gacaaatgac atctcttgtc
      781 tgagagtcat ttttcctcac tagactgatt tgtcatcccc ac
//
LOCUS       KCPA01000260             508 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 28445tic ultra-conserved element locus
            uce-3089, sequence.
ACCESSION   KCPA01000260
VERSION     KCPA01000260.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 508)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 508)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28445tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>508
                     /note="ultra-conserved element locus uce-3089"
BASE COUNT          126 a          134 c          120 g          128 t
ORIGIN      
        1 ctcagtccca gcaggtctgg ctgctcgctc aggctcaggg ctgaggtgtg agcagtgcac
       61 gggagcccct cccagaaccc agccgtagag ctgtggtgtc atggcccatc aggacatgtt
      121 tgacgctcaa ggtagtgttg cccaccgcta tgccaattac tggatattaa tggcaggata
      181 gcatgcatat gcctgaactg ggaagcagaa ggttaataga cgaacagcac cagaagatcc
      241 catttatcag tttctattta tctctccttg ggaggtggca ggtttacagt aaataccttc
      301 tgtcctccta atttcctaat gatggggata atgatggaga atggtgaagt cattaactgg
      361 gacagcctct ctgcatcact ctgtcaacca catctctcca agacctgcaa tgaaaagtga
      421 taggccccag ctgttcacca gattctgttt ccccatgctc aaccccaatt gcaggcttag
      481 caattcaaaa gccagtccct ttctctgc
//
LOCUS       KCPA01000261             433 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 28553tic ultra-conserved element locus
            uce-1979, sequence.
ACCESSION   KCPA01000261
VERSION     KCPA01000261.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 433)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 433)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28553tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>433
                     /note="ultra-conserved element locus uce-1979"
BASE COUNT          147 a           77 c           83 g          126 t
ORIGIN      
        1 ttacagaatt aaatccatat gccaacacaa aacaatgagg aaaacaaaac taacaaggta
       61 tccatttggc tttgtttgac tttgcctgcc agagaataaa acacaaggct gggtgtaatt
      121 taatgcaaac cttggcctat cctggtcatg catatgactg accctcagtg caagaccatc
      181 aattttctat taaagatcag agagttgaca tatcaaagtc aacatctagc tgaataactg
      241 cagtaacttg ataataattc ttttgtggat ttcagagtgg cttttcggta aagtatcaga
      301 aaggtagcag ttttcaatcc tgacccaaca agatctgaat atgaaataaa ggatttgagc
      361 ttgatctccc catgatgtga ggatgaatgt tctggtaaat gttaacttag tgctctgaat
      421 agctcagtaa tag
//
LOCUS       KCPA01000262             551 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 28656tic ultra-conserved element locus
            uce-4822, sequence.
ACCESSION   KCPA01000262
VERSION     KCPA01000262.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 551)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 551)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28656tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>551
                     /note="ultra-conserved element locus uce-4822"
BASE COUNT          162 a          140 c          102 g          147 t
ORIGIN      
        1 tgtcttctgc cctttgagaa gaccatcaaa ggagtctgct gctcctgcca aaaactgaac
       61 aggcctccct cagccccaaa tcagttttct cctgaccccc ccgtgatgca agtactgctc
      121 ctttaaatgt ggtgcatttg acaagctccc tcactctcaa aagagtgaga aattttcatt
      181 gattgatttc ttcatggctt cttaaacaga taattaattc accgtgaacc tgcggacaca
      241 ccgtcgtgag tcgttaatat tgtaaattca catatacttc aataatcgcc tgaccccccc
      301 gtcaccccga aaaacagata gctgtgcagc aaggaggagg ggaacgggaa tcgattttcg
      361 aagacatgaa gggatcaccc agcaaaggga agctattgat tctcttttat aagacaccgc
      421 tataatattt attcttttgt aaacagaatt aacccagcat catgggtcat tcctatcgaa
      481 caactttcct cacatgtgca cagcaatgct gattgtatca gatgaggtag aaacatccaa
      541 actgtaccac c
//
LOCUS       KCPA01000263             381 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 28761tic ultra-conserved element locus
            uce-2667, sequence.
ACCESSION   KCPA01000263
VERSION     KCPA01000263.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 381)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 381)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28761tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>381
                     /note="ultra-conserved element locus uce-2667"
BASE COUNT          141 a           81 c           65 g           94 t
ORIGIN      
        1 cagctccaac agaaagccat agccattaat ctagagacct ctgggagttc aggatcgtgc
       61 tgtaaaacct agaccctgcc aagactgcat cagataaagc catcaatgca ttgtaaaaaa
      121 gacacaaaac ctatttcatg ggctgcactg atcaagcaat tacaatcatt gactacatta
      181 agcaaagaaa cagcggggtg ccctataaaa ttgactgcca acttgaataa tcaatagact
      241 ccatgtagag taaattaaat aactgaaaaa ctatttggaa aagctgaagt taaaaagcca
      301 atctgtaatc cctcatccat ggaaaaacaa tcttgcatcc aaaagattct tttgcttgct
      361 ttcattgttg tcactgggaa a
//
LOCUS       KCPA01000264             444 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 28868tic ultra-conserved element locus
            uce-6003, sequence.
ACCESSION   KCPA01000264
VERSION     KCPA01000264.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 444)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 444)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28868tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>444
                     /note="ultra-conserved element locus uce-6003"
BASE COUNT          150 a           88 c           79 g          127 t
ORIGIN      
        1 tatttctttc agtaggagaa aacatgcttt ggctgcttct gtcacctggc tgaagaaaaa
       61 gttactgtgt gcagttaata tcgaacagca gccatctcca gatgatccct gctgcatcca
      121 atttctgcca aaatgctttc tgttaaacct ccatcaaaca gacacacggc gcacaaaaga
      181 aaacctcatc accaagggaa actaatccac cggtgcgcaa tgtaagcctg tcaacttttt
      241 attataagaa gtcatcactc atttcagtga agattaaaag tatgactaaa ttgagaaaat
      301 cctcttagcc attcggaatt ttaatagagg agaaaagggg gtgagtaaaa tttaaactgt
      361 atgtgcgtgt gtgcctatgt atctatctat agtgtatgaa tcaaatatat aaaattacat
      421 atatatctcc acacacaagt tgta
//
LOCUS       KCPA01000265             713 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 28974tic ultra-conserved element locus
            uce-3359, sequence.
ACCESSION   KCPA01000265
VERSION     KCPA01000265.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 713)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 713)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..713
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28974tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>713
                     /note="ultra-conserved element locus uce-3359"
BASE COUNT          244 a          123 c          111 g          235 t
ORIGIN      
        1 aaatgcttgt accttaaaga gcatattcca ttaccgtata ctaaattcct taccaaataa
       61 tttatagtat ttaagtgtat acagatacac tcaggaccag actgctcaaa cataacaaac
      121 aatactattt tatggccatt tgaattattt atgtttccta atgacaaaaa ctcaccagtt
      181 ttgattttgg tactgaggtg cttgagaagt acacagtagt gtcattacca taataacttc
      241 tgaaattaaa acctgtctaa aactctacgg aaagctaaca tccagttcat taaccattcc
      301 tgttggtttg ttttcaataa tgcaaaaatg attagaagtt taatttgcta atcacctgtg
      361 ttttgactgg cagtggatat ataattctct gcagaagtct aaactagccc ttgcagaaaa
      421 taaaatatgc taatgcttta tcaagtctaa tgatatgaat tcaatcatgc ctaggttaat
      481 cattgatgga tccacaatta atttctcctc aactctgttt aattttagag acaatggtga
      541 taatgagtaa gaaaaatggc tatcagtctt tgagaagttt tagtgctcac ttaccaatca
      601 tgtggttggc aacatgaact tggatatccc actcattgta gaaaaccatc tgacatttga
      661 tgcactggta ggtcttcttc taaagaaaca agagtagata aaatttactg aaa
//
LOCUS       KCPA01000266             383 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 29080tic ultra-conserved element locus
            uce-2474, sequence.
ACCESSION   KCPA01000266
VERSION     KCPA01000266.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 383)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 383)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29080tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>383
                     /note="ultra-conserved element locus uce-2474"
BASE COUNT          115 a           75 c           94 g           99 t
ORIGIN      
        1 tcacaaatga ctgatctttt aaaagagaag gagaaagtgc acagggatgg cgacacagag
       61 agaaggagat gaggaatggg gggcaggcag aagagggctt tgaccttctc tgaaggatat
      121 aaaaaatcca gcagcctcag gggacaccca actatctagc atattgctgt taaaatgtct
      181 gcaaaattta atacacttgg catgccatct aatcagtcct tggaaaccat ggtttctctc
      241 cctcctgcac tccaactgtc tcagaccttt tgggcatgag gtgggtattt tctacaggtg
      301 acagaaagtt tggtgtatgc acacaaggtt ggaggcttta atttgtgttt catttgccta
      361 gccgaacaaa cgaagtttat aca
//
LOCUS       KCPA01000267             693 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 29190tic ultra-conserved element locus
            uce-4175, sequence.
ACCESSION   KCPA01000267
VERSION     KCPA01000267.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 693)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 693)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29190tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>693
                     /note="ultra-conserved element locus uce-4175"
BASE COUNT          188 a          131 c          129 g          245 t
ORIGIN      
        1 ttgctatttg tatattttgc ttgaattgag catttgtctc tgaaattaag cttgctattt
       61 ttctgtcaca catatagata tagtcaaagc ttgtttgaaa ctcaattcag gatctcatct
      121 tttgcccttg gctttaactt atgtatgcct ttgtctgtat tgtctgtact tgtctgtact
      181 gcaaacactt aggcatgttt ctgctattat atatagacta aatatgtcat aacacatgaa
      241 tgcaaaagga tcaaaaatgc cttcctactt tataatctgc tgagccagaa acagactctg
      301 tttctacact gccttttcct acatgtcata ttatcatcag ctgttcttat atcccaaaag
      361 aatactaact actgatcgat tgcccggaca tgtctggccg tggcctacat gtgccccggg
      421 tagttcattt atttgccacg gtggatttgc tagagtggaa tttaatcaat agctaattca
      481 ttaattctgg tcctcgagta tgtaaggatt gtgcagtata aaaatgactg gctggcttca
      541 actttgattg aaatacgaca aacactacag ctgacagcct tggcaggtgc tgggctgaat
      601 atgaattttg cttatttatc ctccatgtgg aaaagtggac gttttaatac atatctgtta
      661 gagtataggc tcatgggata cctgagatat att
//
LOCUS       KCPA01000268             328 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 29290tic ultra-conserved element locus
            uce-5678, sequence.
ACCESSION   KCPA01000268
VERSION     KCPA01000268.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 328)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 328)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29290tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>328
                     /note="ultra-conserved element locus uce-5678"
BASE COUNT           85 a           78 c           61 g          104 t
ORIGIN      
        1 gtgtgtgtcc cctcaaggca atgttgattc aaatctgctc aagatgcagc gttgcacagc
       61 taagcatctt cttgattaca acccgacaca cttctaactg ctttcattct cactgccaca
      121 gatactttgt caacagtcaa attacgccat gctgataaca atgcataatg gtcttcctca
      181 aaggaggctc ctgtcatgga gcagcctttc atttcttctc tgggaaatag atctggatgt
      241 tttgtggttt cgccacggtt gcaatgcaat tcttcttctt tgtactcacc tgaaattacg
      301 gcatacagaa tggaaaatat ttatagtc
//
LOCUS       KCPA01000269             749 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 29398tic ultra-conserved element locus
            uce-5125, sequence.
ACCESSION   KCPA01000269
VERSION     KCPA01000269.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 749)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 749)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..749
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29398tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>749
                     /note="ultra-conserved element locus uce-5125"
BASE COUNT          238 a          139 c          167 g          205 t
ORIGIN      
        1 ggcgagaggc agcgagagtg agcaggagcc tcggcttccc cactgtacaa ataaacttta
       61 aggaacttgt gcacaaaact tacctttgac ttgcaaggag ccatttttca catagtactg
      121 agaacttgtg gtttggatac ttctgtccct aaacctgaca atttgaatgg ccaggaggca
      181 cacgtagcct gcaaaagagt caaatgaagt ccagcgtcag tgagattata tgttatgtgg
      241 tatataatgt tggatgtcaa ctccccaaaa ccataaaact tactttaatg gcaccacgtg
      301 actttttata gccagtgagc ctatctgtct gtgctatgga tgattttacg atctaattca
      361 tagacaaaac cctattcatt tggcacccaa atgtcatata gccggaactg gggcttataa
      421 agtttactgt tttataactt ttaagggaag gcatcaatgt aaccagtcag taaatgtgca
      481 aatctttagt tgctcttaga agctcagaag agttaaccat tcaagctctg atggggtaag
      541 taacattatg tttatagcaa actaattgta gcggagaaaa aaaatcttta aagggtgcag
      601 agtgagaatg tggctagaga gggttactaa taaacgcaga gggcttggac atggctgtcc
      661 taaatatagt taatgaaacc acaggagaaa ttctagagcg atgcaaacac accctggagt
      721 ttgcagcgtt ttaacaaagc acaggcttt
//
LOCUS       KCPA01000270             487 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 29503tic ultra-conserved element locus
            uce-5989, sequence.
ACCESSION   KCPA01000270
VERSION     KCPA01000270.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 487)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 487)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29503tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>487
                     /note="ultra-conserved element locus uce-5989"
BASE COUNT          153 a          104 c           84 g          146 t
ORIGIN      
        1 ttgcttttgc aagtatcaag aattcatgta aacagctgtt ttcttggaca atgaagaagg
       61 aaaatcaact ttaaaatgtt ataagttgca gtgcttcttg gtgtttacag gcagatagaa
      121 ggcagctgca ttctgtccca gcttgaattc ataaacctaa cttgatcgcc ttctgaagaa
      181 tttatgaatc atggttaata atcagcttta ggcccttctg aggaaaaaat cacatttcga
      241 agctacaaag gtccactaaa cagcccacgg gaaatgaccc tgcatcccat taaatgtaaa
      301 acctcactat tgtaggactc tgtgtcaaag ggaaaacatt tcagtctctg ctcccttcaa
      361 gtgtcagaga gctccctctg cctaaatgct ttaagattga agaaacatac cagattcctg
      421 cttctgaggg aaaatttttt cttcttcgaa agaaaacaaa ccatttcctt tcttcactcc
      481 catatat
//
LOCUS       KCPA01000271             732 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 29615tic ultra-conserved element locus
            uce-7361, sequence.
ACCESSION   KCPA01000271
VERSION     KCPA01000271.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 732)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 732)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29615tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>732
                     /note="ultra-conserved element locus uce-7361"
BASE COUNT          218 a          145 c          148 g          221 t
ORIGIN      
        1 ttttttttta atcaaatagg tatccattag ggggctctcg aggtttaaga tgatcagcct
       61 tgataccaat ggcttcggag ctttacttcc taaccctttt ttttacagaa aaggtcacga
      121 atcgcctaca gtgatgaggt gcggaatgag ctcctagggg atgacgggaa ttcctcagag
      181 aaccaggtag gatgctaatc aagaagccct agtgggtggc tggagggtga aggaggtcac
      241 tggcacactg ggcttctcaa gctgctcctt aacagcatta gcaacaactc atgtggaagt
      301 gatactgttt aatgcaaagc tggggtctta atcaacttca aaatgtttct tggagatctt
      361 acatttaacc ctttaacttg tgatcactgt ctgctatctc aaaaaaaatc ttttcttctc
      421 ttttctttat tatttagtac ttaagaaata acttgaaaca cgctgtttgc cgacaaagcc
      481 aaggtcttca cctcaaacac atgtaaaagg aataaaaaag tacataatgc agctttgata
      541 ataatgcagt ataattaaat caacactggc aggcaaaaca aatgaaagtg cgctctcaga
      601 attaggctgt atcccactca gtttccttgt gtgattcctt ctttaaccag attttctctc
      661 cttgtaccaa aaacacaagt tgtactaata agagcgtgct ttcataatgc gtgttgtact
      721 aggatgcaga gt
//
LOCUS       KCPA01000272             387 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 29723tic ultra-conserved element locus
            uce-5259, sequence.
ACCESSION   KCPA01000272
VERSION     KCPA01000272.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 387)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 387)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29723tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>387
                     /note="ultra-conserved element locus uce-5259"
BASE COUNT           94 a          116 c           79 g           98 t
ORIGIN      
        1 tccccttgct catcacacca acatgctgcc ccaaaactgg ctggatctca gggccacagg
       61 tgaggagggc agggtggcgt ggcgagggtt aagtccagcc ggctgttgca agagtccatt
      121 acctcccgcc acattacctc attcatttct tatatgcgga tggtttattc tcccatgagc
      181 accctcgctg gcagacatgg ctagtgtaaa gtcccctccc tcccctgtat ttctctatcc
      241 atcacattta acactctgac agtaacagtc tataatgttt ctattctaca aaaccgctct
      301 gtcaactcca ggcttccaga gcagcaactg aggaaaataa ataacatcaa cgccaggccc
      361 gacagtatca cagcttgctt tctgctg
//
LOCUS       KCPA01000273             591 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 29831tic ultra-conserved element locus
            uce-4808, sequence.
ACCESSION   KCPA01000273
VERSION     KCPA01000273.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 591)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 591)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29831tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>591
                     /note="ultra-conserved element locus uce-4808"
BASE COUNT          186 a          140 c           91 g          174 t
ORIGIN      
        1 tccaaaattg caattaccag tgcaacaact ccaattattt gcataagcat ttctgtttgg
       61 tacaatcctc cttctgtcac caatatcttg tttttacaga tgagatccag ttctgtttat
      121 cttcacaatg cattaactag ttccagtggc tttcttgaaa gcataatgac ttttcctgta
      181 ctctagtaaa aatatatccc cacaaatcaa gaagaagcag gctcagacta agtggttgag
      241 aagatttaca ttctattgct aactcagtta ttactctgct gaaaacccca tagcatcaat
      301 ataatgaatc cctcaacctc tgctgctagc acaatttttc ttcccaacct cattggctcc
      361 caactttctg cttgaccttt tacaatctgt gtgtggcaga gcttcattac aaccttttaa
      421 tgatgcacaa atggcacaca acaccaaggt cacagcacat gtgagaactt ctccagcacc
      481 tcctgagcag gcaaagagtt ttcatttaag aagaccgttc agtgggaaat actaataccc
      541 accagaaaaa aggagtatct gctaagtcat cagtgaccaa atgaagaaaa t
//
LOCUS       KCPA01000274             558 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 29936tic ultra-conserved element locus
            uce-3850, sequence.
ACCESSION   KCPA01000274
VERSION     KCPA01000274.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 558)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 558)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29936tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>558
                     /note="ultra-conserved element locus uce-3850"
BASE COUNT          215 a           90 c          100 g          153 t
ORIGIN      
        1 gggcattgtg aagataagtt tccatgacat ttactataac tcttttatat taccatctgg
       61 ctattttata tgtagcattc agagggaaat ataaaaaaaa tgatgtaaag ctgaaattat
      121 ttccttgata acacttgttt taaacaccat gccactaaat agctaaaaag tctcaaaagt
      181 gaatgcataa agcatataaa agctacaagc atacttacat aaattcttaa gattaaagta
      241 ataacttcta gaaaaaggtg ggagaaaaca tactacaata aatctatttg taatggtatt
      301 tgggttccag caactgcttt cattgttctc aagtggctta catataaaac aatagatttg
      361 atgtatgatt tcaatccctt atggaaaact gttctatcta caagcagcct gtcaaacaaa
      421 gtaacaaaaa agcagctcag cactaagaag aaataacata cttaaaaaca aagcagggac
      481 accaaatcca tttcagacag ctttaaggac cagcttagcg cagagagtgg gatgcaggct
      541 tggggaaggg agaagggg
//
LOCUS       KCPA01000275             698 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 30050tic ultra-conserved element locus
            uce-2616, sequence.
ACCESSION   KCPA01000275
VERSION     KCPA01000275.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 698)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 698)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..698
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30050tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>698
                     /note="ultra-conserved element locus uce-2616"
BASE COUNT          161 a          176 c          206 g          155 t
ORIGIN      
        1 aggagtgaga acatggaaaa agagataaaa tgggaggctt gggaaagggg ggaaaccaaa
       61 gaggtggcac ttgtcaccag tgctgcacta ctcacaactc cagtatccca caaactaagg
      121 atgactcagg agagtagctg atgggattga tcccacccca ccctcccatg ttccagatac
      181 atccccagtc cctccccgcg ctcttcccct ctcactcaaa catcagactc aatacttgag
      241 agtttctcat aaacatgccc gttgctggag ccattgaaag ccctggggtt tttgttgtta
      301 ggcacacagg ggttggactg gttccctata cagatgtcct tctggaaacg ggctggcaca
      361 gccccatgaa gggctgagac caccggcttg ttggtggtga caatggctcg gaagtctggc
      421 ctggctttgg gccctcctgc caccacaggc tgcctgaaga aataagattt gctgccgtgg
      481 agcaagcatt ggtcatcccc aaaagtgggg ataaaagggt tttgggtgac ccggtcgggg
      541 tagagtgact tgctgagcat gtagccccca ctgctgacgg ggttgttgtg gtggtggtag
      601 ctggtggcgg gcactgagga cttgttgttg gcaaaggtgg tctcactggc tggcatctca
      661 aacatgtggg cgtaggggct cccctccaaa aagcggcc
//
LOCUS       KCPA01000276             533 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 30157tic ultra-conserved element locus
            uce-3153, sequence.
ACCESSION   KCPA01000276
VERSION     KCPA01000276.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 533)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 533)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..533
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30157tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>533
                     /note="ultra-conserved element locus uce-3153"
BASE COUNT          139 a          110 c          122 g          162 t
ORIGIN      
        1 ttcagttcct ctgattgtgc cattgtagga ataaggtgct ccttctctcc ccccattgaa
       61 ctgcaaggct ctaaatatag gtcaccccag gcaattaggg aagagtcgct ggttttgaaa
      121 gacaggcagg aagcccagtt tccaagtgag ttatcaggtg agatgatgtt tggcctcaac
      181 cggagtgatt gacagggggt ctgcatgttc acagatacat tatttaaaca tggggagata
      241 taagagatct tctgcactaa ttacttcgaa ggctgtatta atcacaagac actttaatac
      301 tcaatcaata cttgcatttg tcaatgacct cgtaaatctc ctcactttaa ctctgctgtc
      361 tggcaaaaga tttgacatct tcggttttgt gcaactgttg ctcagttttt gcaaagtctg
      421 ttccaatgct taaagttcag tttcagaagt ggagatagga aaaggcagct gtgcagctgt
      481 gtttcaaccc ctggctcatc atttttgatg tgaactgggc tcctgctgaa ggg
//
LOCUS       KCPA01000277             824 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 30268tic ultra-conserved element locus
            uce-298, sequence.
ACCESSION   KCPA01000277
VERSION     KCPA01000277.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 824)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 824)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..824
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30268tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>824
                     /note="ultra-conserved element locus uce-298"
BASE COUNT          234 a          191 c          141 g          258 t
ORIGIN      
        1 attggctcat tttctgaaac ctgagccttt aatagcatga agacctttta aaattcttga
       61 gttcctccaa attatttcca attaatacaa ggtcacccct ttcaatctgc aaggcaaact
      121 tttcctttat taatgtgttg ataggaccca gagtgcattc ctgtactccc agaatacaac
      181 tctgcagcag gcctgtgcac aattctgtac cagatgtgtc acattataag attttcagat
      241 tcagtttcag tctctctgtc gacagcctgt catctgttgg agtttatcat ctacccactg
      301 gtaccattca ttggttgcca aagcgaggca ggtcacagac aaatagactt agatctatgt
      361 tgccactaaa ttgaaatttg gcaacaatgt cagccagagc aaacagctgt tattttaacg
      421 acaagcaaac caattctgtc cttttaaatt atgttaatat aaaacagtgt cacttcacat
      481 atcagagagc tttcagttct ggagcccttt gaaggccacg cagactgaat ctattcagcc
      541 ttcatttctt tttgacaaac agatccaatg ttctaaaaat aacaagtgag taagagaggt
      601 ggaattcatg ataaaaaagc ctcctgacac tacatgcact gtaatctatc tcttccctgc
      661 ctacaagcag gcatatgttt gcaattgctt cttctcgtcc ccagttacca ttccattcct
      721 tgaggtctgg atttcaaact ggtgcagtta tcaatcacct agcaggcctt gtcaaacttg
      781 ctgaactgct ggcagccgta ctttcttaac atttgctgaa tttg
//
LOCUS       KCPA01000278             383 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 30372tic ultra-conserved element locus
            uce-6451, sequence.
ACCESSION   KCPA01000278
VERSION     KCPA01000278.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 383)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 383)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30372tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>383
                     /note="ultra-conserved element locus uce-6451"
BASE COUNT          132 a           61 c           58 g          132 t
ORIGIN      
        1 tctgcatcga aaactgaagc aagtgggacc ttatctatat gcattacttt gatttcaaat
       61 tatttttagc atggctttta ttgtactcat tgttacgtac ataaatcttt aaagtaatac
      121 gttttgtaag aaatggtcat aaaaatttac agccagtaac ttttcccctg tcccttacaa
      181 tgatattcta ctaaaaccat taaatggttc tcattaatgc cctttaaatg attgtgtaat
      241 gacccacaat cgcttgtaag tgaacaacca ttaaagaatt accagttctt agcatgcttt
      301 taagtacagt ttaaatacat gggaggtaac gtataatata ttagaaaaag tactgaattt
      361 gaaattgtaa aaacaggatg gct
//
LOCUS       KCPA01000279             519 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 30484tic ultra-conserved element locus
            uce-2665, sequence.
ACCESSION   KCPA01000279
VERSION     KCPA01000279.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 519)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 519)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30484tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>519
                     /note="ultra-conserved element locus uce-2665"
BASE COUNT          155 a           93 c          100 g          171 t
ORIGIN      
        1 tttttcataa aattatttga ttctgttgac acaaagcatg tacatttctg gacaaaatgt
       61 tataaaatat tctgacatat tttaatataa acaggaacat tttcagtgat tgcttggatc
      121 taaaatgttt ttccacttga catttgttta tacttcctag gaaagaaact ctatttatgg
      181 atagctgaat aacacaaata aacatctgaa agagctgaaa aatcagcttt gattatgcat
      241 gaaaatctac aatgtcattg tgtactcttg tgccgtattc tgattgcctg tttattttta
      301 cagagctgct ggtgagccca tggaagaaga gccagccttg tgaagtgcca agtcctccct
      361 gatatttcct gtgggtgaca tcattgtgta tgcaccctca gacatgtctt gtctgcttct
      421 tgggtggcac agatcagatg gaacataaac actgggcaca aaactcggca tagcagcttc
      481 acttgttctt tggatggact tgaaagagcc tgaaagatt
//
LOCUS       KCPA01000280             624 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 30595tic ultra-conserved element locus
            uce-3997, sequence.
ACCESSION   KCPA01000280
VERSION     KCPA01000280.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 624)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 624)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30595tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>624
                     /note="ultra-conserved element locus uce-3997"
BASE COUNT          212 a          108 c           98 g          206 t
ORIGIN      
        1 tcaaagtgca atttgatggc aaactctgct tccttcagtt cagatctgtc ttgtcacaga
       61 cacagtagca tcaccccatt tgttccttgg tgaaatcatg aaacgcagat tttactagtc
      121 ataaattagt tatgcctttg catacaccca gcaaaattgc aatcccaaac atgcagatca
      181 agattatcta ttgaaatgcc aggcataagt tattcattaa ctaaaaccat tctgtaattt
      241 tattgatata ttttgtggag ttcacatatt tttgtacagc aaacataaca ctgtaggcca
      301 caagaagctg cagcactatt gtttaatagc agcaaggtat attttataat cagggtatgt
      361 ggacaataaa tagtctgttt ctttggatgt gaatgtttaa aatgaagttc tgctgcagct
      421 tcataacgtg attgctattt tacagagctt atacacaaaa atatatatgc aatctttttg
      481 tctatatttt atacaaatac aacagtagtt tgtgaataca ttttaaagta catatacatg
      541 ataagcaact caatttccca tatcacagga tagcaaattt taaatgcaag aaacatatac
      601 aaattcagtc tggaatgcag ggtt
//
LOCUS       KCPA01000281             568 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 30703tic ultra-conserved element locus
            uce-1474, sequence.
ACCESSION   KCPA01000281
VERSION     KCPA01000281.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 568)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 568)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30703tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>568
                     /note="ultra-conserved element locus uce-1474"
BASE COUNT          189 a          103 c           90 g          186 t
ORIGIN      
        1 attaaacagc aagtttataa attagttaac ctaaaggtta agtgcagaac agcatttgag
       61 cctaaagtaa cttaaccctt ctttaaaagg acctaagtgt aaagaataaa gacagtattt
      121 ttccttttcc ttttttttaa agaagccaca tgaaatgttc tccgagttaa gttttaccat
      181 tcataatgaa tgcagtctcg ccattcaaat gcgaccataa gtacacagaa gataagaatt
      241 taattaaatg tagattaaaa ccaaacagga aaacacactc gctgataatt ttatcccatc
      301 ctctggccat attttttata cttccttctt gttcttcttt gggctatagc ttatcaacat
      361 gccgatagta ccataactca ttacatctga tggtgctgct gaaatgtgca ggcttggcgc
      421 ttgaatttca gaggcactta aaatgcaaag catgtaaatg tctatgttaa atatattagt
      481 gtggtaatgt tagtgaaaag aaagtgattt cttacaaatc cttgtacttc acatcataca
      541 ttatcattgc ccagtcacaa gctggttt
//
LOCUS       KCPA01000282             710 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 30812tic ultra-conserved element locus
            uce-6301, sequence.
ACCESSION   KCPA01000282
VERSION     KCPA01000282.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 710)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 710)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..710
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30812tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>710
                     /note="ultra-conserved element locus uce-6301"
BASE COUNT          233 a          109 c          129 g          239 t
ORIGIN      
        1 gaggaaattg gagtgtcagg ataattctag tgtatgcaaa ctttacaaga tgaagccaat
       61 ccaaacgtta catctttaag cttcgtagta gaagattaaa actaatatat atgatcagtt
      121 ttacctaccg tgagaattca aagataggta tatcttgttt ttaattcaaa tttttacttg
      181 atcattttat cacacatgca tgcactccct cacaagcaca cgtctgtgta ctgaattgat
      241 aaagaaagaa ctctggttaa ataatccact tttgtctgac aacggaatca gttatagagg
      301 tgcaaatatg cagaaagcta tttggaaatg catcctcgta gttgtcaggt tttattatgc
      361 aggaaggtgt catgtttgtt acgaagctga gtgcagatgg cagagtggaa gaaatggatc
      421 actaatttta acaatgatta atgaacagag atagaaaatg aattacattg gactatcgga
      481 ggcaagaaat atttttgaga aaattttgac tcatctgctg tgctgttctc tgtaaattat
      541 tttctgaaat tctatatgtt gtcaacagtt gactgcattt tccattactg tctatttctg
      601 ttcttaagta cttttgtgtt attagagata cataatttaa aaataccaat acattcctga
      661 tgcagtataa atgttccaaa ggcgccacaa atgtcctgtt tataatacct
//
LOCUS       KCPA01000283             705 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 30917tic ultra-conserved element locus
            uce-1224, sequence.
ACCESSION   KCPA01000283
VERSION     KCPA01000283.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 705)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 705)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30917tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>705
                     /note="ultra-conserved element locus uce-1224"
BASE COUNT          221 a          135 c          127 g          222 t
ORIGIN      
        1 taataatgcc atgaattagc acttggtata tttttctttt gcattcccaa aaactgaaca
       61 aatacatttt tagactctga tataagcaag cagctgtaaa acttccattg ttcatgaaat
      121 cctgcatatg tacaacccca agtccccctc ttccattcaa tatatatgaa aatgcaattt
      181 actgtacgtc aaatgaaaaa cgcagttttc aaatgcatga caacaggtgc tagttaaatg
      241 atcagacact atttgttacc tagtctctta ctctcatttg cagcatgata aattgcattt
      301 tagcagagca ctgcgatcta aggggtcttg acatgctttt attgatttgc ataggttata
      361 tgcatgtatt cctgtttgta ggcaaatagt gccacgagta aattcaagtc actgtgcctc
      421 tgtttcaaga aaattgcagt catcacaggg gagccaagat ggagtgaggt tgggtaaaag
      481 agacacatgc agcccattgg aatctcagaa cctctattaa gatttatagg ctgcaggatt
      541 cttttgggct tcaacattat tcttagtaaa ccctttctgt cttcagctgt ttataaaaac
      601 tggcagcttt agcaaagaca gaagcttacg ttgtaggtag cacaatttaa cataatagcg
      661 atagcctgtc ctctaaatat cctgatactg attttgaaag agaaa
//
LOCUS       KCPA01000284             716 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 31029tic ultra-conserved element locus
            uce-7847, sequence.
ACCESSION   KCPA01000284
VERSION     KCPA01000284.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 716)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 716)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31029tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>716
                     /note="ultra-conserved element locus uce-7847"
BASE COUNT          200 a          142 c          143 g          231 t
ORIGIN      
        1 aagaattagg attgagacat aaagtttgta tgttagcagt gcagatgggt gagtaattta
       61 tcatcatatc tcactggcca catactactg gtgattgaca ctgtgctgct ggtataaagc
      121 attttaccat cagctctcat gatttctaac tgagagtata ataagccaat ttacagaaga
      181 ctacagactg tgataacttc atcagaggaa agcagataag cagtgaaccc tttgctaaac
      241 ctaaatacta atctgcattt ggttaaacaa gtgcttttgc agagacagct ggagtttatt
      301 cagtttcttc ctttatttct agagcctgag ggcatgttcc ctccagaggt tgtcatcatc
      361 aacagtacag ctgtacgtgt catctggaca tcgccttcaa acccgaatgg tgttgtcaca
      421 gggtactctg tctatgtaaa taaccagcag tacaagactg gaatgagcga gccgggatcc
      481 tttcttttgg cagatttgtc tcccttcacc gtgtatgata tacaggttag aatatatttt
      541 ctgcgttgtg tgacatactt acttactgga tttccaagaa gaatatagtt tttacgcacg
      601 ttgtgtttgc actgatgctt gtgcaaggaa tacattagcg tgttttggtt tgtgtacgct
      661 tttcatcaca aattcccatt atctcaaaaa atgtcaaaac tccatttact ttcccc
//
LOCUS       KCPA01000285             764 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 31138tic ultra-conserved element locus
            uce-4919, sequence.
ACCESSION   KCPA01000285
VERSION     KCPA01000285.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 764)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 764)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..764
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31138tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>764
                     /note="ultra-conserved element locus uce-4919"
BASE COUNT          192 a          170 c          196 g          206 t
ORIGIN      
        1 ttctactttt ctagcctttt agccaaattc tgagttccca ccatcttgcc accatggggc
       61 tgatatctct ccttgccaga atgcaggggt atgggtctgc catagaagta gccaaggtga
      121 tttcttttaa accagccaga ggagaaacca agtttggatc acagagggtt cattctaatt
      181 aaagtagccc ttgtgcttag tttttggaaa gcactagagc catgacaaag aagtaacagt
      241 tggaaacatg ggcattttcc cagcagttct agggttaagg aaattgtaga ggagtgacat
      301 ggtgacagtg ttccctattt ttgtatgttg ccagtagcga gaagagggaa actttgattt
      361 ctaatccgct ttggaggagg ctccgtatca gggctgcaca gaaacatcca gtcaagcagc
      421 tcctttatca taaaggggat tttaattaaa actgttcttg catcatgagc gaaatgagcg
      481 tcagtgccag ccagccctgt actgggcatt tatctccttc aaaccacatt accagtaatt
      541 gctgcattaa atcaaagtcg agggagatta caggtctgga ttgggcgggc ggccggtgcc
      601 agcgtgggga gctccgtgct gccgagccgc tgatacggga accccctcgg ccccccagct
      661 gggggtgaag gagctgctgg atcccaagaa ccccttctca ttaacctagg aggagtggcg
      721 gagcatttta agctgctggt gtttttctat taacttcctt ttaa
//
LOCUS       KCPA01000286             412 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 31245tic ultra-conserved element locus
            uce-1590, sequence.
ACCESSION   KCPA01000286
VERSION     KCPA01000286.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 412)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 412)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31245tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>412
                     /note="ultra-conserved element locus uce-1590"
BASE COUNT          127 a           72 c           71 g          142 t
ORIGIN      
        1 attttatgat agctggtgat attgttgatc acatttttaa aattgagagt tagaacgata
       61 atatatactg caaaacacag attttaaaat ggttgttttt ccagtgcctg caaaattgtt
      121 ttattagggg actgcggaac acctgcctta aaatgtcgtt cagaacatct cccgaatgtc
      181 gttttcctta attgacttgg aaatggccca aatgtattgc tgaatgcagt ctaattaata
      241 ttaataataa atgccattat taacatcaaa gaacatctgg tgctcctgtt tactctgaag
      301 ccttatatgt aacacatttt gtggctgttt catcttgcaa acattgtgca gtaaacagtt
      361 tttgccatgc aggtcaaaac agacccctgt ccaagcataa tgcattatat tt
//
LOCUS       KCPA01000287             593 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 31352tic ultra-conserved element locus
            uce-134, sequence.
ACCESSION   KCPA01000287
VERSION     KCPA01000287.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 593)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 593)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..593
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31352tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>593
                     /note="ultra-conserved element locus uce-134"
BASE COUNT          187 a          107 c          115 g          184 t
ORIGIN      
        1 gtcttgttga ctgggaactt aatcaagtta ctattgagtt cttgtatgca ttgcttcggg
       61 tgactgtttt acttgtagaa ttatagctgt gaccaacgtg aggaaattag ctctggacac
      121 aagttttttt ccccctacat gtgaaaatat ttagcaaaca gtgacaatga tggaaaacag
      181 taggaaacaa aatgttctac attagtataa aacatgaaaa atgcagcaag gaccctcagt
      241 ggtacaacat gtgttatgct ggctggcagt ccattaggct tgatagacat ttcacttacc
      301 taagtcaaat ataacagtct agtattcatt aatataagaa gggggttgtg gaatcaagcc
      361 taccatctgg ttagaacgac agaataatct acaactcatg attaggtcta aggagtggaa
      421 tttcacttta atctttttca ttgctcgaaa tttccatctg cgcagtacgg cacatcattt
      481 ttcttcaaga caaatgtgct gtttttcatg ttccaaaatt agatcagaag aaaacgatta
      541 atcatgtcat ggcctgggaa aggaaacaaa gccctgatat ttctctctct ctc
//
LOCUS       KCPA01000288             535 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 31460tic ultra-conserved element locus
            uce-6458, sequence.
ACCESSION   KCPA01000288
VERSION     KCPA01000288.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 535)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 535)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31460tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>535
                     /note="ultra-conserved element locus uce-6458"
BASE COUNT          179 a           87 c           74 g          195 t
ORIGIN      
        1 aagatacact ggttcttaac ttgtacatat agcattactt ccaaggaaac tatgtactgt
       61 attattccca gtagtaaagt tctagaatac atatagttta tctctgacac accaaatatg
      121 aaaatatgag atgctatttc actaaagtct gagctccctt cccccattca caagcttgat
      181 gctttaactt catctctcat gctatgggga atgaattaca gaagcaatct atcctaattt
      241 gttaacttat tcaaataaca gttattatac ttaactatgc taaagattat ctttttggtg
      301 gcagattgtt tattttttga tgaggctaat tactgatttt ccaaaggtaa tttacattta
      361 ttactaatac atcttttaaa atgtgacaga taaatgttgt tcccataagt gtattatgaa
      421 aaaagttact atttaaaaac acattattta atttgaaaga taaatggcaa acaccattat
      481 ttttcctgaa gcacctgtgc tgtaagctca tttaaatgtg taattccatg tgtag
//
LOCUS       KCPA01000289             583 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 31570tic ultra-conserved element locus
            uce-6804, sequence.
ACCESSION   KCPA01000289
VERSION     KCPA01000289.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 583)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 583)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..583
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31570tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>583
                     /note="ultra-conserved element locus uce-6804"
BASE COUNT          155 a           88 c          125 g          215 t
ORIGIN      
        1 gcagctcctt ttaagacgtg atttgttttc agatgctggt gctggaaagt ttttgttgtt
       61 aaacagacat gtagaacctg tctaccaacc ttttctactt gaaactaggg gtacttaagt
      121 attgctctct ttcataaaat taagtcagta attactcatg cattcttcag tggtagctgc
      181 ttagcaacgt gttttctgtg gataggttag atcaaagtgc tggcctgcag gttgtttttc
      241 cctttggtgg gatgaagtgc agttgttttg atgttaggtt tgatggattt gtttgccact
      301 gcattcatta gcttcacatc aaaaaactga caggctgtta aatgaaactt tggcttagat
      361 tttcagcttg actgtttcaa gacctatgtg aagatatttt gtttttgtgc tgcagcagcc
      421 tggagcagtt atgactgttt caaagggaag aaaagttatt taatatcttg atttatttgg
      481 gtacaagact cattgtcttg aagatagcta tgtccagctt atgttaccca aatagtatat
      541 attttgaaat atttgagaca cattttatca gaagagaaat gat
//
LOCUS       KCPA01000290             570 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 31680tic ultra-conserved element locus
            uce-6926, sequence.
ACCESSION   KCPA01000290
VERSION     KCPA01000290.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 570)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 570)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31680tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>570
                     /note="ultra-conserved element locus uce-6926"
BASE COUNT          163 a          105 c          173 g          129 t
ORIGIN      
        1 gactgttgcc tctggtgggc atgtattttc ctgatgttta tgaacctact tgtgagcaaa
       61 agaaggggaa tgaaaacagc tgaaggcaga gagagccctt cagcctgtct taccccaaag
      121 atgctgctca tgcagtcagg gagctggtgg aatgtaggag aaagaaaaat agaaaaggta
      181 gaaatgaaaa tatttgagag atgaaaagaa attaccatac ggcaggatcc tgttattcaa
      241 cctaattttc aaaggactgc agctgtcgca ctgagataat ctgttaatta taacagtcat
      301 tgtgttttgg caatggaagc aggctctaaa caaggcaagg tagtgtggaa aagagagggg
      361 aggcacggtt gtgtcaaaat gcatgtcaga tgctagcttg aaatctaggt gggcgagccg
      421 gccgggagga gggtccctcc ccagcagggc tgagctgtgc cactgccgga gggaaggtgg
      481 aagcatctgt agtaccctgt ccggtgtggg gcgactcctc ttgctgaatc caggcatgca
      541 ttgaccagag gaagagcttt gaggggctga
//
LOCUS       KCPA01000291             732 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 31791tic ultra-conserved element locus
            uce-3412, sequence.
ACCESSION   KCPA01000291
VERSION     KCPA01000291.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 732)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 732)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31791tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>732
                     /note="ultra-conserved element locus uce-3412"
BASE COUNT          211 a          153 c          149 g          219 t
ORIGIN      
        1 gatcagatag aatttctcca aggtgcacag agatcttgga tggagtttct tcttagcctg
       61 acagctggag gtaaaattgc acacaatgag tcagttaata tagcagggcc tttctccaga
      121 aacctggcca gcccttccca ttagagagct agtctttggc tagctctcca aaggctcagt
      181 gactgtgtac attaaaaatg ctatcaccat tataggctct tcactaaagg tacaagagca
      241 tgacaaatat atgtaatttg caaattggct ggtcttttgc aataatttag agacaccagt
      301 tagcggcaat agaaatctaa caattactga tgtttaaggt ttgcattgtt gctctgtgaa
      361 tatttcatgc ataaatgaac ttcccctgga cctactgctg tttctgatga ggcgctctga
      421 ggctttattg ccaaatacac agcggggctc ccccaatgag ccacataacg gatgacgcat
      481 caccttcgca gcttaaataa tgcagagtat ctacatttta tagagtggtg gcacacttta
      541 tttacatatc aactgagtgg ccaggctgaa tgtgaagaaa tatgtgaagg aaagcacttt
      601 taatatttca tattagcaag caccctgcct cagcaggctg agatgagagc ttatctgcct
      661 gattgtctct ctcttcttgc aaaactgatg caattttccc attcttgtga actttttcag
      721 cattattgaa aa
//
LOCUS       KCPA01000292             687 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 31901tic ultra-conserved element locus
            uce-7841, sequence.
ACCESSION   KCPA01000292
VERSION     KCPA01000292.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 687)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 687)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..687
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31901tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>687
                     /note="ultra-conserved element locus uce-7841"
BASE COUNT          231 a          128 c          112 g          216 t
ORIGIN      
        1 ctagaaacag tattatttgc taaaaatgca gtagctgcca aaagctacga tccatctaaa
       61 gcaaacatgt ttaagatgga aatagagtgt taatgctgaa gaaagacaga attgagtata
      121 caaattctca aagtgtggaa gcaactgcag tacagagtta atttgttttt aatctttctg
      181 gtcttgattg aaatgcagat aagcacctaa attagaaaga agtgcattaa gacaataaca
      241 gaagtaatca aatttcaaac tttctaatta aacctctttt tcctgcagaa ggttattggg
      301 aattcaacac tagccttggt tcacatgata gaacaatggg aaaattttcc gaatggttga
      361 acgctaaccc tgacaagtgt ggagagccaa ctacaataca ttatatggta gcataacctg
      421 ccacccacgt tgctgagaga acagctttca aacacatgca ccgagctgta aaaccacaaa
      481 atcccttatt acacattgtc ccttacttaa ggtgaaatac actattcctc cttttacaaa
      541 tctcggtgtt tttttaaacc ttcatctttg aagtttattt agcagctttt ttcagacttt
      601 attttccaaa tgccattttt cctgttttgt tttcaaacca aaataaaatc atgtttttat
      661 agtacacagt gaagcctgtt gtgcctt
//
LOCUS       KCPA01000293             569 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 32013tic ultra-conserved element locus
            uce-3958, sequence.
ACCESSION   KCPA01000293
VERSION     KCPA01000293.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 569)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 569)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32013tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>569
                     /note="ultra-conserved element locus uce-3958"
BASE COUNT          130 a          156 c          142 g          141 t
ORIGIN      
        1 atctaaaacc tcccaatcca tccagctgtc tggcatttgc tattataggg caccaacaga
       61 gaaatgaggc tgtggcttta tcactgcacc ctgggtgaca acttgatttt ctgctttcac
      121 cgcaggcagc agcagcccaa catgatgggg ctgttaattt gtgcatttca tggtgtctgt
      181 cagggggccg ggagaggagg gtttcagggg aagggaatgg agcatgtccc agcctcggaa
      241 gcacctgtct gcattgacgg cacagagcac ttcttattag cgtgcaggtc tctaaatgca
      301 gccccgggat gacagcctgg cattcccagc acccacacag tgtgacaggc gcaggcagcc
      361 ggtcccattg tttgcccttg atgagcatgt cattaatgga aatggaagaa agtgagggcc
      421 acatcagtat tcaaatagcc tccatcctct ctgccattca actgcctggc tcaggcggct
      481 gcagatttcc ttctgcagct ccacttacac gttttcacag atttattccc attgcataca
      541 aatcccctcc atgtggctct ggccccatg
//
LOCUS       KCPA01000294             652 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 32123tic ultra-conserved element locus
            uce-618, sequence.
ACCESSION   KCPA01000294
VERSION     KCPA01000294.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 652)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 652)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..652
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32123tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>652
                     /note="ultra-conserved element locus uce-618"
BASE COUNT          246 a          131 c          113 g          162 t
ORIGIN      
        1 tttgataaac tatttacatt ttcagacttt aaaacatatt caaagcagca atagacacta
       61 gtttttcctc taaacgccca aataattatc ggccatgggc ccaggtaggt acctgcactg
      121 tatatagaat ttctacaaag aaaacctgcc cattatgtag ccagtggctg ttaaacaagc
      181 agccctcgcc agtaagagct gcacccacgg tgttgctata ggaatcaaag catagtaccg
      241 ttgtcccaac agctctacac aaactttaca atttgaaaca gcagctagca tgtcagtcca
      301 gcatgtcagt gaattgtgct gattaaatta acatagagta caatctcaca atatacatca
      361 caaacaaatt acaatgtcag gaaataagag ttacagtaag ataagttatg tagtaacagc
      421 ttataagctt gtcttaatgt aataaaaaaa attttacatg ggaaatacaa taatgaatga
      481 acataaatgc taagcattct agtttgctac aagctgaaga agggtacaag tttctggaaa
      541 gcaaaacaca aaaggaagac aaacggagaa tgcacactag caggactgca atgtgcagca
      601 tacaaacagt taaatatttg cacattcccc atactccaag agcaccaagg ac
//
LOCUS       KCPA01000295             800 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 32230tic ultra-conserved element locus
            uce-1368, sequence.
ACCESSION   KCPA01000295
VERSION     KCPA01000295.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 800)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 800)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..800
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32230tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>800
                     /note="ultra-conserved element locus uce-1368"
BASE COUNT          309 a          122 c          159 g          210 t
ORIGIN      
        1 agtatcccaa ttacataata cagtatatta aaataagtct cccttaatgt tgcattgcaa
       61 agggtttgga gtccacgaac aacattggaa tagggacaga gtgacctttt aaaaaaatga
      121 aatgaaatac actttcattt tccagaaata tgcatgaaag taaaaacttg acagcatgga
      181 agaacataag caaatatatc tttttatttg aagataaaaa gaagcagggg ctagataggg
      241 aaaggaaaaa acctgtgaaa aaaacggatg atgcagtttt tacgaataag cagcttaatg
      301 tatcttggca cccacagtaa gccttgtagg agctcaaagt gcctcaggca atctgtgagc
      361 agaatagcaa ttttattact ttgtcattaa accaatttca cagcagtatt gtttgttaat
      421 gagcagcggc aaacgagcga agatgtcaca cactggaata gcagtgagat ttgtgaccca
      481 agctcagagc actaagatgg aaagaccatg gctataaaaa aggaaatact ttgggatgaa
      541 atgcaaagtc tatacagcag agcttgtgtt tatgagctac cattttgcta agagctgtga
      601 gagaaataaa ggtctggaaa tatgcagtta aaacagggcc tataaaatta aaaccaaatt
      661 aaagtatagc agaggattac tgcacagact gtactctaca aaatatattt taaaggtgaa
      721 atctaaatca gttttgtttg aatttggttg gtatttataa aattcaataa agccatacca
      781 aattcaaaac caaagcagca
//
LOCUS       KCPA01000296             409 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 32336tic ultra-conserved element locus
            uce-5332, sequence.
ACCESSION   KCPA01000296
VERSION     KCPA01000296.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 409)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 409)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32336tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>409
                     /note="ultra-conserved element locus uce-5332"
BASE COUNT           97 a          106 c           73 g          133 t
ORIGIN      
        1 aactttcccc attcacctcc aacttgggct gttgctgctc tggagccccc ctctcagtat
       61 cagtgccctg accctcctga gctatattat atcattccat tttgacacct tttatcaaac
      121 tttaatgaaa tgacccaggc aaacaaattg tcattaaact ttccatcact ttgtcccttg
      181 gtatcgtctt ttataaattg gacagcaaat gttgtattga tcttctcgtt cttgcagctg
      241 aacttgaaat gacccagact gcttgttgtt tatggcctgg agttgctttt ccttgacatt
      301 tccatcccca gcatgacatc tcttttgttt ttgtggagat gaatgaacaa gacattcgat
      361 accgagacat cctcggccac ggcaacggag gcaccgtcta caagtgagt
//
LOCUS       KCPA01000297             561 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 32447tic ultra-conserved element locus
            uce-4539, sequence.
ACCESSION   KCPA01000297
VERSION     KCPA01000297.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 561)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 561)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32447tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>561
                     /note="ultra-conserved element locus uce-4539"
BASE COUNT          173 a          115 c          110 g          163 t
ORIGIN      
        1 actcattaaa attctctgca catctcatgt actgctgtag acagtgttat aaataaatct
       61 atgagaattg aataagagaa aggaaagcac tgttattctg cagttgtaga tatacaaatg
      121 tatattactt accctcaaaa acccataaag actggtgctc atatttgctg gtaagtcaat
      181 ctttctttca gacatcaaga gatgacctct taagacccaa agatttatca agtcagcagt
      241 ttattccctt aggccaccat cttcagcctc ttcctcttcc agtcacgtct attgaaggac
      301 tttgcaaagc cccatgagga aatggactaa tctactgctt tctaaaggac aggagtgatg
      361 cctatcctga ctgcacttta tgggatgaga aagctaataa agggaaggag actacatcta
      421 ttcgtgagag attcggtgtg atgtttgtat tataacagac agagctggag tgctccagct
      481 gtcaatcaga gaaggagcat tgtcccagtt tcagcaggca ctgctatcat tttactttat
      541 gggcacaaaa catctccgag t
//
LOCUS       KCPA01000298             552 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 32555tic ultra-conserved element locus
            uce-6094, sequence.
ACCESSION   KCPA01000298
VERSION     KCPA01000298.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 552)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 552)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32555tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>552
                     /note="ultra-conserved element locus uce-6094"
BASE COUNT          159 a          119 c          107 g          167 t
ORIGIN      
        1 gattaaagta aatcctagta tttttctgca tgcctgcccg ctccctggct cctagagact
       61 gctgggtaac tgcctattat cccgtggttc cacttcagtg ccctccccaa taaaactttt
      121 catatcctta taaacgaact agattgccgt gttataaaca tttacactgt gctaacagat
      181 catctccgca catcagaatt ggctaaattc ccttttccag atgaatatat tgaaggagat
      241 tagagatatg atagcttttc agattgctga acccagagaa attagtttag tgagcattta
      301 cagaggctaa attggaacca ttaaatagtg gattaaattg atggtacttt cattgtctgt
      361 ccttcggtac tgctgtaaaa tcaattagcc gtcactattc cattctccat atagtgagat
      421 tgtcagcctg gctaggagct gcagagcctc acagcagtag caagcagtgt gaaaatacac
      481 ctattaggtg atgtggcatg aaataacatc atagggcaga atgtcccagt gagatttatc
      541 ccagccttat ct
//
LOCUS       KCPA01000299             665 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 32666tic ultra-conserved element locus
            uce-4552, sequence.
ACCESSION   KCPA01000299
VERSION     KCPA01000299.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 665)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 665)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..665
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32666tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>665
                     /note="ultra-conserved element locus uce-4552"
BASE COUNT          185 a          142 c          138 g          200 t
ORIGIN      
        1 gctctcttct caaccagagt ttggttgcac agacttttta tttgcacaca gttgtcctta
       61 aaaataataa gtgactatat gcctgttcaa ggccagaaac aagttgacca attgctgctg
      121 tgttttactt cagggtatcc atctaaaggc agggagagag aatcaggcta taatggtttg
      181 cctggctcga aaactccatt ttgggccgcg gagagtcata tttcagagag tattgatcac
      241 agtgcagttt gtgtttcctc acgtccatga tcctgtttgc agccctgtaa aataataaca
      301 gtactcatgt cagtaaggta attaccattg atctaacaca ctgtgacaaa tttttcagtc
      361 atgccacttg attcatactt aaagttatgg cactgctgac tgctccttaa ataattgaag
      421 gatgcccttt gtaaatcagc acactcttgc caaaaagtgg cagtttcttc tttgttccag
      481 gccttgtttc ctagcttcat cagggatttc aaaattaaac agacagcttt ccacagccca
      541 catagttcac acttggagca aatatcatct gagctggcaa atcacttatg acacctttgt
      601 tcaagaaaag cggagactac agagaagatc agagtctctg tggctgtggg gttgctagca
      661 ggtgg
//
LOCUS       KCPA01000300             681 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 32775tic ultra-conserved element locus
            uce-2999, sequence.
ACCESSION   KCPA01000300
VERSION     KCPA01000300.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 681)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 681)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32775tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>681
                     /note="ultra-conserved element locus uce-2999"
BASE COUNT          203 a          113 c          121 g          244 t
ORIGIN      
        1 ctctttggag taaaatgtgt gaattatttt tattgttgca ctccttagta tccatatttt
       61 cttcttttgc accttatttt acacatttaa tttaaatgag agcaaatgtg ttctggctga
      121 atgttgttgt atataacaga actatgatta actgtatgaa taattaccag ttgcaactaa
      181 acaattcaga tggatagttt cattaagaaa acaacatggg gtcattataa ggttctggtc
      241 gctgccccca gtcttaaaaa aaatatagtc ctctgaacca ccaatctgaa ctggtgatga
      301 aatatcccaa gtaggctcac attaagctgt ataatatgca ggctgcttga tttgtattga
      361 atatgtgtct ggtggctgga acccactgta atgaactagc ccacaaatca cagcttaatg
      421 ggaatctact tatacatatt gcttaattaa aagttgtgag cttattaaca tgtgtctttg
      481 gcactgagct ttggggatgt aatctctgtg caaataggac taggttgtaa aagttttata
      541 gattgacaac gatattaaat tccatacctt aataacccat cattttctca aagcgtggtt
      601 cctattctgt atttattcaa agctgtgaca aattgtttgt ttgtaatcct ttactgtgta
      661 gggcttttgc tttatctcaa a
//
LOCUS       KCPA01000301             631 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 32886tic ultra-conserved element locus
            uce-6282, sequence.
ACCESSION   KCPA01000301
VERSION     KCPA01000301.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 631)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 631)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32886tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>631
                     /note="ultra-conserved element locus uce-6282"
BASE COUNT          196 a          123 c          141 g          171 t
ORIGIN      
        1 gacagatggg gaggcagatg tacaatgcta cataaaagta gaaagactta tattatcttc
       61 tgcgaatgcc ttaagtgact gagcgcaggc agcaggcggg aaatgaagag ttaacctgac
      121 tgtcatttct ctccctcagc agctattgct ccctcagact ttcaagagga ggagagaatc
      181 actttgagat tcttctgcga aaatagtgtg cgccgaggcc ttccttccgt cactcatgga
      241 tgctctgcca ggatttccca cctgagacag attgcgacgc atgttcgaat cactcatgca
      301 ggagaagcaa tacacaagtt cagtgtaaag ccactttaaa agctcatcgg gtgcatactt
      361 tacttgtaca aaatacctta ttcatgatgg agcagtgagg gcctaggtaa ttacttgaat
      421 caaggtggcc tcagaagtgt ttaaaggaca cttagagcat gaataatgca aaataatttg
      481 catctaaatt ttttaagtgt tctttattca aaaactaaaa tgcagttccg attaaagttt
      541 gatgagtgaa agctgagcac ttcataccca ctgtgaaacg tctcctattt gtggaaatta
      601 tttcagacag tggtaaaggg acaaaagaga t
//
LOCUS       KCPA01000302             623 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 32995tic ultra-conserved element locus
            uce-7230, sequence.
ACCESSION   KCPA01000302
VERSION     KCPA01000302.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 623)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 623)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..623
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32995tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>623
                     /note="ultra-conserved element locus uce-7230"
BASE COUNT          205 a           90 c          149 g          179 t
ORIGIN      
        1 gtccacgcta gagccctttc attaccctgc tacgcggctg gatttatgct ggtggaagtc
       61 ctggttttgt acaatgatta attgacctta acaagtttaa ggatgcttat ttgcacacag
      121 ttacgaagtg ttgcaatatg tcacaaatga gagcggcttc tattataaac ataatggcat
      181 aaacagtgaa agctggttat atttccttaa aagttcattg cagggaaatg gggaagcttg
      241 agaagctaaa caaatccagg caataatgga aatgtagcat gaaattactt ctgtaaacaa
      301 cagccattca ttatttgaac atttttcata agagagtcag cagacgagcg ttgatgttaa
      361 agggtgtgta tggaggggag gaggaagcag ggagattatg aatttggaaa gaaatcttgc
      421 agggttatat cgacagacgt acatctgttt aagaggtatg taaagcactg attgatccct
      481 gaatattaac aatcgatgcc attttcttca ttaacttctg agtggagcac aaagaaaggt
      541 atatttgatt taagggaaag agaagggagc actatttaat gttgatttgg tgtagtgaat
      601 aaccccggag agaaatgtaa ata
//
LOCUS       KCPA01000303             590 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 33104tic ultra-conserved element locus
            uce-2267, sequence.
ACCESSION   KCPA01000303
VERSION     KCPA01000303.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 590)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 590)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..590
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33104tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>590
                     /note="ultra-conserved element locus uce-2267"
BASE COUNT          165 a           99 c          115 g          211 t
ORIGIN      
        1 aattgcactg agaggaatta cttgttcttt cacagatggg gagaaagttg cagcctgcct
       61 cagttaagca tctttgactt ttaatttgtc accatgtagc tttgtttgaa attggccatt
      121 tttaccctat ttgtcgtttc tattggtaaa gacttatcgc agtatatctg ggtccacagt
      181 atgtaaagac tgatgatatg gagtggccat atttgcatgt gtctgtcccc ggaagggtgg
      241 actgtgattt tattggatgt ctgcagctat taccttgaag gataaatttt catttttcat
      301 ctattcttcc ccatctagac tgtatcagga ttaactgtaa ttccagtaag tgcctattca
      361 aacttttttt ccaccattat aaaatatgca aactagaatg acaaaaattg tggacagctt
      421 gcaagcattt gataatttat taatgaaatg tgatgattaa ttatcattgt gtaaaaagtc
      481 atcatatttt ttgtccttcc cataggacaa caggtcgtaa acaagcctag aggaattggt
      541 gcctgtagta ctctagatag gctattttat ttacagtagc catggagttt
//
LOCUS       KCPA01000304             365 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 33207tic ultra-conserved element locus
            uce-3661, sequence.
ACCESSION   KCPA01000304
VERSION     KCPA01000304.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 365)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 365)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33207tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>365
                     /note="ultra-conserved element locus uce-3661"
BASE COUNT           91 a           77 c           79 g          118 t
ORIGIN      
        1 tttgtaaatt gtgtaatatg tcatgaatct ctccaccttg ctattgatca tgcatgttcc
       61 acctcctttt tgtttttgcc cttctgtggt ttccttggga taggcgctgg ctcaggcaat
      121 taaagaagcc aaagagcagc accctgacat gtcagtgacc aaagtagtgg tacataaaga
      181 gacagaaatc acaccagaag atggggagga ttgaccacag gtaagaggac cagatgattt
      241 tcctaggcat ttactgggct ggcatgttgc agatgttgtt ttcctaccct ttaactcttc
      301 actttctctc actggcattt tcaagttgct ggttatcagt tctgtatttg agactaaact
      361 gcatt
//
LOCUS       KCPA01000305             286 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 33307tic ultra-conserved element locus
            uce-3258, sequence.
ACCESSION   KCPA01000305
VERSION     KCPA01000305.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 286)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 286)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33307tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>286
                     /note="ultra-conserved element locus uce-3258"
BASE COUNT           94 a           62 c           59 g           71 t
ORIGIN      
        1 aagtccagaa gaaaaaggaa agctgctctc ctgtcggagc ctcggcttat ctcagcagct
       61 ccctattttt aactcaattg caaacgatat ctgtgatcaa agggccagaa cccctggaag
      121 agcttaggcg aacagcgtgg tggccgcaat tcttcctgat gatttgtaag caggaaagga
      181 cttttgacat gaaagacagt ttaaacagca caagaatagt aataaaccag ctgtaaaatg
      241 cttaacattg cccttgaact aatgcaaatt gttccaaaca attttc
//
LOCUS       KCPA01000306             793 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 33419tic ultra-conserved element locus
            uce-2397, sequence.
ACCESSION   KCPA01000306
VERSION     KCPA01000306.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 793)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 793)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..793
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33419tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>793
                     /note="ultra-conserved element locus uce-2397"
BASE COUNT          238 a          114 c          164 g          277 t
ORIGIN      
        1 gtttgtatag cttctattag aaatcttgaa gttaattttc tcttttgaat gcagaataaa
       61 agatttaact aaaataatag gtttgagttg tgaagttact gtgattgaga aagcgatgta
      121 cccctttaaa ggtattagca taaagatagc acatttgttt attatgtttc aaaatcagct
      181 tctagtatct ctgccacagg taacaattga cttttcaggc ttcaagttaa tagccttgtc
      241 tcttgcttgt agggatcaat attagtatta attaatcacc attatcagcc ctaggatctg
      301 gttctatttg ttgttacatc agcaaaatat caatatagaa agtggactct ctgatcgtca
      361 tggcaacttc atctcttggg tcaaagaaag tttatcttat ctgtgcatgg agagtggcaa
      421 actgtttagg gatctagttt gaactctaag aacattgatt tagtttttgt ttgtgaatag
      481 aggctgaatt ccaatcacag gggataggta agatttaaat attaatgccc acaggcttgt
      541 ctgagagggt gtcattacca ctactgtcgg attgtctttt tgagatgaca caatggtaga
      601 ggagaattgt gtagtcagga ctatttacag tttagtaatt tgtgcattga aaatgggatt
      661 taaagggaaa gtatggacat tctttagcat gtatgcagta ataatgcttc tcccaattgg
      721 ctggggtttc taccacgata gattacgaat tggtagaaga aatagatttt attatgcatt
      781 ctcccttcag aga
//
LOCUS       KCPA01000307             574 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 33527tic ultra-conserved element locus
            uce-5453, sequence.
ACCESSION   KCPA01000307
VERSION     KCPA01000307.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 574)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 574)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..574
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33527tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>574
                     /note="ultra-conserved element locus uce-5453"
BASE COUNT          166 a          116 c           81 g          211 t
ORIGIN      
        1 gtggcacttt aaaatacaga tgattgttta cttcgtagag tttattttgt cccattctat
       61 attatgactt tgcattaaga attaaaagta acctaatata aaacattcat ttgaatatcc
      121 attctgttac ctcagtagct gttacttttt taatatgatt ccatgcttgt atttgttatt
      181 ctcctgcttt agtaatactg ccagctgtac tttccacttc acatgaattc aggtctattc
      241 caattttcca cttccctgcc tttaatccca gtgttacaaa cagaatccca tgctacacta
      301 atatctctta ctcactggca cagaagagat caatatttta aaatgccata tgttttatag
      361 atcaactgtc ttgtgcatag gaatccaatg gcatctgaac cattacacaa tatttgtaag
      421 ttacacaagt caaggactgt ggggtttgtc tttgcacaca ctatcaaatg tttgtactca
      481 tctgtgaaat gttttaatat ttttatgaaa cttaaatgct tgatctcctc tcacctcaag
      541 ccatcctctg tggcaggcat gataatgtga acat
//
LOCUS       KCPA01000308             610 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 33638tic ultra-conserved element locus
            uce-2358, sequence.
ACCESSION   KCPA01000308
VERSION     KCPA01000308.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 610)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 610)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..610
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33638tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>610
                     /note="ultra-conserved element locus uce-2358"
BASE COUNT          184 a          121 c          116 g          189 t
ORIGIN      
        1 aaaagctttt ggaattcttt caggtatcct gaaaaatggc tgatgatatt gatattgaag
       61 caatgcttga agctccttac aagaaggtga gtatgccagt gaggtcctgt ttaccttaat
      121 ttagcattat tcatgaaact actgctgaac tgtaaactaa catccctgga gccctcatga
      181 tttatcttat tggacataca ttacatgtaa ctttcaagtt aatatatact gttaatgtaa
      241 ttatattgtg cagtagtttc actacagcgt gatgaataaa tgcccatcta tctctctttg
      301 tagacttgcc taacgatatc tcacctctac tcccatgaat tcacctttga ttccagtgtg
      361 aactgtcaat cataaggtag taattgagtg acgtatcgct gtaccgtggt ccctaaaaaa
      421 tccacccacc aaaacaatcc taaaaccttt cctctgtgaa gtctagtttg gtatagcaac
      481 aaggtgaatg cagtggtttg ggaaaacagc agggttccaa gaataacctt ttcaccagtc
      541 ccatggcaag taaatatttg aacagtctgc tcagtgcgag aagagtggga cttgctttta
      601 atgcagaagg
//
LOCUS       KCPA01000309             405 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 33746tic ultra-conserved element locus
            uce-3675, sequence.
ACCESSION   KCPA01000309
VERSION     KCPA01000309.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 405)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 405)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33746tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>405
                     /note="ultra-conserved element locus uce-3675"
BASE COUNT          117 a           80 c           61 g          147 t
ORIGIN      
        1 tttccttgcc tcttagcatt tcatgctttg tgtcatttga taatatacat cactaggttt
       61 aatactcaat cgtttcccaa atccaattta acagggttta atttacatga tgatacaatt
      121 tctcacacca gaaagcatag taacccttcc tctttggagg ttaatggtga tctagcttaa
      181 agcccaaaag ataattacaa ggaatgtgct tcaggtgaca aagtattttt gacaacccca
      241 gactgttgat agttttttaa ttatacttct tcccaccata ggaaacagta tgcaaatagt
      301 ttgcaggcat ttttatttat ttatttctca gcaaattgct atgcactgta atcaatattt
      361 taactgactg ctaccctagg ctctgtcttg cttctatttg gagca
//
LOCUS       KCPA01000310             538 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 33855tic ultra-conserved element locus
            uce-2051, sequence.
ACCESSION   KCPA01000310
VERSION     KCPA01000310.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 538)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 538)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..538
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33855tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>538
                     /note="ultra-conserved element locus uce-2051"
BASE COUNT          163 a          104 c           93 g          178 t
ORIGIN      
        1 aggctatttg cttgaaagct gttccaaata ataggattat tctcatcttt catttagttt
       61 aataatacac tacatacatt tgtcaatcaa attagaatta ctgtcagacc ataataatgc
      121 attttagttt agccaatatc agtcagacct gatttatttg cttaatacaa atctaattga
      181 ctttcaggct gctcttctct tttcagctgt taaccgacca agtacatctt taatttccaa
      241 gaccgatggt ttggtagcag ttgagaggaa gaatgatttg cataaggccc cagaagggtg
      301 ccaaaactct tcacgcttta aacaacagcc tttattattc tgtaagtgga tgtgttgaat
      361 tttcatgctt ttgtttccag ttcagccctg acagaaagaa taaagtagat tttgccagca
      421 cccctgctgt gccctgaggg agaaattcaa tgtgcctcat ttgtcttaat tggagaaccg
      481 cccttagcac aagctttttc tatgaatata ttagcataac agacagaaaa gtctaaga
//
LOCUS       KCPA01000311             674 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 33962tic ultra-conserved element locus
            uce-7141, sequence.
ACCESSION   KCPA01000311
VERSION     KCPA01000311.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 674)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 674)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33962tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>674
                     /note="ultra-conserved element locus uce-7141"
BASE COUNT          192 a          149 c          151 g          182 t
ORIGIN      
        1 tttcagtata aattttatcc aactgcaaaa ggaaagtaac tcattatcaa gcagctcaaa
       61 aggctcacag tactgaagga aataaagttt tacgacaaga ggatctctct ctctccctgt
      121 gagtgagaaa gtgagtgcaa gaataagaca gaaagggaag gctcaggagt gctgggtgaa
      181 ttatagactg cctctcaaga ttcacagctc ttcgtggtag gaggttaata ttctcacatg
      241 tcattaggtc tgctggctct actgatggct cattgaatca ggcagcaaat tatttcctca
      301 tgctgcagag gacactacac ttcaaaggga aggagccagg gtcaagacgg ctctccagtt
      361 cgattaatga gttgggatca gcagaggttg cctgtaggta agaatgtgac tgaagctttt
      421 gacaaagctg actttttgaa caggacttga cccaggccgc ttctccccac caaatcttat
      481 ttccaacatt tgcctctgcc tgacctgctc aggcctgttg ggatagtttt gacctcctca
      541 gtctttgtta ccagacacag gagctgtctg cctatacttg atgtgtctct ccccaaaggc
      601 cacatcagat tatccaggct catcagaata cttcagaaca gtgtggcaaa ataagataga
      661 ttcatttcag actt
//
LOCUS       KCPA01000312             953 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 34075tic ultra-conserved element locus
            uce-1425, sequence.
ACCESSION   KCPA01000312
VERSION     KCPA01000312.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 953)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 953)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..953
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34075tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>953
                     /note="ultra-conserved element locus uce-1425"
BASE COUNT          290 a          159 c          197 g          307 t
ORIGIN      
        1 ttttgttatc tggccacagg gtatgaagtg tttttaattt ttctgattaa cttcaggctc
       61 ccaaattcaa gtagaagcat atttgtgttt tccatgtgag atcccgcacc ttactaatgg
      121 atgagtatgt ttgtggtact gtacaaggat taatgaaatc tgctgctgct gattgaccac
      181 tgatggtaaa tgtaattgaa ttagcagtgc actaaaataa atgtagacaa aataaatata
      241 gacaagaaaa tctggtgaaa gcttctgtaa tgttttagat taataggcat acagaattct
      301 tcacattttt tattacgttg tccctagatg aattcaaagt aattggggtg gttaatttta
      361 tttacacaga gccgttcaca gcgcattaaa taatagagat aattgaacaa gaattgtcaa
      421 gtgtgtactg atatcagaca tattacagaa gggaatgtgc ataaaacttc atttctatgc
      481 agccattgtt tatggtaatt aagtacacag atttatccct tggttgcctt ccaagcttat
      541 ggcaactgct attgttgtgc tccattaata tgtaatcagg aaatagttta attttctaat
      601 ctgcagtttg agaattcact ttctaacaac tcttaattac tgcattgccc taatgatgct
      661 catggttagg aaaactgaac caataaactc catggaagaa gccagagggg attatacttc
      721 cagaggtggt gcttacttaa taaacttgtt atgccttcac cagagggagc tcagtgtcct
      781 tcaaaagcaa ctaattttac atttcagagt tgtacatacc cacggagcga ggagttaacg
      841 cgcggcgtgc ggtgggggtg gctgcggacg cgattcgcta gagaaccaga taagcgattt
      901 tttcctactt tatactaatt ctggagttta attgcacagg aagtaatgca ggt
//
LOCUS       KCPA01000313             560 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 34181tic ultra-conserved element locus
            uce-373, sequence.
ACCESSION   KCPA01000313
VERSION     KCPA01000313.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 560)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 560)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..560
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34181tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>560
                     /note="ultra-conserved element locus uce-373"
BASE COUNT          200 a          103 c           95 g          162 t
ORIGIN      
        1 aaatattaat gctgagaaag tggttactct attaaggagc tatcctatgt ttagatttta
       61 atattgatct ccactattta ggaataatta atcattctgt aagaatctgc atataataca
      121 atcagaagtt tagcatcttc cccacaataa tgccataaat ttatattttg acctattcct
      181 aaaggcaatt tagttattcc aacagaaggg ggaaaagggg ataccgccac tttaaaagct
      241 tcaatctctt tgacattgct ggcagtgtat gggaacatta atgcatctgt catgataaca
      301 agctaagaat aacatctaga catcaaaccg agcagagaat ccatctgaag tgattcattc
      361 agatctgtct cattgattta ttaaacacag ggcaacatct gcagcctcac agagccgctt
      421 ggcgaaatta atgcaagatc aattcaaatg gaaaaaagtg caaaagagat aaatcaaaac
      481 acaatttgca tgcagttcca caatcaggct tattgggtgc aaatgctcaa ttttcctccc
      541 aaagcaaatg agtttaaatg
//
LOCUS       KCPA01000314             681 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 34290tic ultra-conserved element locus
            uce-5315, sequence.
ACCESSION   KCPA01000314
VERSION     KCPA01000314.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 681)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 681)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34290tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>681
                     /note="ultra-conserved element locus uce-5315"
BASE COUNT          192 a          140 c          133 g          216 t
ORIGIN      
        1 agcaccattt cattctattc acatacttca gttcatgtaa agtagtagtg gagttttgct
       61 gacttgcccc agctattttt tccagtgtat ttatatgtaa aatcacacaa acgttatgtg
      121 tatggtgtta tatatgaaaa tcaatattaa attcatcatc tttagctgct acagaccaca
      181 gtgaacactt gctctctaat ggttaaatgc cctttggatc tgaagccctt tgatttattg
      241 gaagaaacct gctgggcaga acataccgtg gagctgatta atgtcagctt ctgtcatcag
      301 tttccactta gattcttggc cagctctgac atctcctccc tcaaggatcc agaagaattt
      361 gaggactgat ccaagagctt tactggcatg ggatttgcag aatgtggtgc ttgcaaaata
      421 aggaagatga atggaagtaa aattccatgt tctctactgg acttgtttct ttaactcatt
      481 tctctggaga aagagaccaa tgccaggacc acaccagcta gggaaacaaa tcaatagcat
      541 gttcactggt tttgttacag atgtcttgca tttcctttgc tgctttatat gctcccttgt
      601 agcctgtcaa actggaaaat gactgcagtg agaatgctga gctaccatag ctgtctagat
      661 ttacactcac cattgaacaa g
//
LOCUS       KCPA01000315             499 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 34398tic ultra-conserved element locus
            uce-6894, sequence.
ACCESSION   KCPA01000315
VERSION     KCPA01000315.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 499)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 499)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..499
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34398tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>499
                     /note="ultra-conserved element locus uce-6894"
BASE COUNT          177 a           90 c           85 g          147 t
ORIGIN      
        1 accttcacaa acttttaccc gaaggacaag cagctgcttc ttacaaaaaa ttgtagctgt
       61 cccttttcaa tatttaaaaa tgaaaatgtc tgtaagacac acagaacatg aatgcaagag
      121 ctggtgtgat agcagagaac cttattgcac ataattaaca gacacataat gtctggttac
      181 tagtaatttc cttctagctg agtaaggaaa taatttaatc atgttgatca aatgaatccc
      241 atgagcccag tgcaacatta tgctccctct ctaaatctgc attaactgat aagagtctac
      301 ttggtgaaat catggaaccc aaccttgttt aggtaaaaat attggctttt agtaattggg
      361 ttaatcaagc atgtcactct aattcctgga gctgacctca aaggaagaaa gaaataatgc
      421 ttttattgaa acaaaataaa attgcatatt ccatgttgat ctgttacaac agaaggaagg
      481 tatttctata aagacatgc
//
LOCUS       KCPA01000316             593 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 34508tic ultra-conserved element locus
            uce-4431, sequence.
ACCESSION   KCPA01000316
VERSION     KCPA01000316.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 593)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 593)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..593
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34508tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>593
                     /note="ultra-conserved element locus uce-4431"
BASE COUNT          155 a          134 c          122 g          182 t
ORIGIN      
        1 ttttaaaatc tttatttaat aattttattt ggtgggagta ttttaaagtt atataataag
       61 aaaagctctg aactgtcgca gtgaagcttc tgggataaag aaccctaaaa ttaggacact
      121 atacatgtaa tttacattga cttaaaaatt gtatttctcc acagagcaag actttttaaa
      181 tatttatctc tgagcaatta ataatgcatg actccttcca aactacaaca tgcctatcaa
      241 tttccatttt gaacatgcaa ttggtcactt tttcgccttg attcatcctg cctggctgcc
      301 aaccaaatcc cgcctgcgtg tgcctccttg acactaatag tgactgagtt tctgctcgtt
      361 tgcgtgcaag gtttcccgag cggcggttcg ggcccgggat aaactatctg tcgcggtcgc
      421 atacagctaa tccgccccaa cccccctgac tgaaattgcg tttgacaatt cacctctcct
      481 tggcgtgcct gaggtgaacg tagctgcaga ccatccccgg aagggagctc ctccatatgt
      541 tggggaggat ccttttattt gtgtcaggag aagagcgtgt ataggcagag gtt
//
LOCUS       KCPA01000317             433 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 34612tic ultra-conserved element locus
            uce-7067, sequence.
ACCESSION   KCPA01000317
VERSION     KCPA01000317.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 433)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 433)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34612tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>433
                     /note="ultra-conserved element locus uce-7067"
BASE COUNT          142 a           75 c           83 g          133 t
ORIGIN      
        1 ttatgaccct ggccatgttc ataatcaagt gaataaacat ttcatattag cactttattt
       61 acataaggca aaaagatttt taggaaagtg gaggttcttg gagctttaca gtcacagaat
      121 ctcacatatg gaaattatat ttggtcttaa tctgctttca gaagactggt acaaatatta
      181 aaaagtaatg aagtaacaag attgtttgtt aatgtcacat aaaagtgcta attgtgcttc
      241 atttcctgcc tacagctaaa ctcaagagac attgcctaat tgcctccctt gaaattggaa
      301 tagagcttca gtgcttgatg gatttgttta aggagttgta tgccacacag ggtctttcaa
      361 agcgtggcaa atgaaggaca actgccaaaa aacttacctc actgaagagg aaaggccctc
      421 attcttaatt gcg
//
LOCUS       KCPA01000318             456 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 34722tic ultra-conserved element locus
            uce-3400, sequence.
ACCESSION   KCPA01000318
VERSION     KCPA01000318.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 456)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 456)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34722tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>456
                     /note="ultra-conserved element locus uce-3400"
BASE COUNT          127 a          100 c          100 g          129 t
ORIGIN      
        1 gcagccacgt tgcgagcagc cagagatggc cttaaataat gccgccgcgc gccgccagct
       61 acacccagtc tgataatttt caaagctatt ggcaacctgg gaattttcct gccttatcac
      121 cagggctcag ctaacttcac taacactaat cagagctgga atcattcatt caaggattgc
      181 atgatcatgt ttttctttag cggtgacagc tgcctgagcc gcattagcaa tgcagatgag
      241 tcagcctaat aggttaatgc agaacacgcg aaaattaggt ttaatcccca gtgaaataat
      301 ctaacatttt cacatttctt gatgttggga tagagacatt ggtggtgact caattaggtg
      361 taatgtagat caaagcaaat ttaccttctg gctgaacctt ccccgtagtt tagatagaag
      421 aatataaggg ttcttttcta attggccagt ggctgt
//
LOCUS       KCPA01000319             733 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 34828tic ultra-conserved element locus
            uce-2936, sequence.
ACCESSION   KCPA01000319
VERSION     KCPA01000319.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 733)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 733)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..733
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34828tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>733
                     /note="ultra-conserved element locus uce-2936"
BASE COUNT          250 a          111 c          142 g          230 t
ORIGIN      
        1 tggtgcctaa aaactataag tgtctaaagc cacagaaaaa ttctgtagag taactagttt
       61 gcaaagttat aaagtatttt gtctcctctg tccttaatta ctcttagtaa acactgattt
      121 ataatctttc tggcaaagtc agtgacccag agagaacagg agaaacaagg gtaaaaattg
      181 aaatgtattg aaacaaagaa tgaaattgat tgatattagt cataattaac cacatctcta
      241 gtcatttaac agattcttct tgttgcatgt tttggtacat aagactaacc tatgtttttt
      301 atctgatgca ttagaaaacc ctgggagaga agatccaaga cacaatggta gggcacagtg
      361 ggttaggtcc acgtgacctg ctctcgcctg aaagcggcag cctggtaagg cagctggagg
      421 tcaggatcaa agagctgaaa gggtggctga gagatacaga gcttttcatc ttcaattcct
      481 gtctgagaca agaaaatgaa ggaacaatga atgctgagaa acaactgcaa tattttaagg
      541 taataaaaaa actatcatag cttttgtaga gaaactcttc tttatggtgg gataaaatat
      601 ttatacataa tgcaatgcat gtatatattt aattatattt tcatcttcat ttgtgttcac
      661 tcatgtttat tttattgaat ccttacaata atatttattt tataaacatt ttgcaaaaga
      721 gggctttaga ggg
//
LOCUS       KCPA01000320             584 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 34939tic ultra-conserved element locus
            uce-6934, sequence.
ACCESSION   KCPA01000320
VERSION     KCPA01000320.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 584)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 584)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..584
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34939tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>584
                     /note="ultra-conserved element locus uce-6934"
BASE COUNT          168 a          106 c          123 g          187 t
ORIGIN      
        1 aatctattta ctccgtaact aaagccatat ctatgtataa acatgtttat gcttttggtg
       61 gaaatttatt gggatcactt aactgactga ccaaacctgc ttgttgaaac attgcttttg
      121 agccccttac aggctccctg gttgtaagct ggaagcataa aacttgttgc acccatcaca
      181 ttttaaatca gatgtgagtg tacaggctat tgataaatgt gctgacttgg gagagatctg
      241 tctggtctgt tcattcagat gatgaggtaa ccgtggggaa gttctatgcc accttcctga
      301 tacaggacta ctttaggaaa ttcaagaaac gcaaagaaca aggactggtg gggaaatatc
      361 ctgcgaagaa caccacgatt gctctgcagg tgatttttaa ctaaccattt tgtgagctta
      421 cttgaaatag caggtagatg aatattgatg gttatgcaat gcattttatt tagctgggac
      481 acttttggcc cttattcatc agaaagctaa tcctgctatt caaggtaagt gcttctttat
      541 ggattactca aacagttagt tatgaaattt cttagcacgt ctag
//
LOCUS       KCPA01000321             649 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 35048tic ultra-conserved element locus
            uce-6204, sequence.
ACCESSION   KCPA01000321
VERSION     KCPA01000321.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 649)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 649)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..649
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35048tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>649
                     /note="ultra-conserved element locus uce-6204"
BASE COUNT          183 a          109 c          135 g          222 t
ORIGIN      
        1 aggatttaaa cttacatgat ttctaaacgg gaatggctgg gtttgttttc tgcacagggt
       61 tattcagcgt tttacaaaga aggtttatgg agcggcttaa aaataagggg ttgttgttgt
      121 tgtttagcaa tgtgtgggaa atacttttat gttcacacct caccccatga atagggataa
      181 taggttcggg atactcattg aaatttgaag tttttaaaca gaaattccct aacttttgct
      241 cgttttctca acttttttca taggaacaat gccaacattg aagccctcgg ttggagtctg
      301 cacagttgga gatctttggt gccattttag acatctttgg atttcatcaa tcaaactgac
      361 tgcaattttc cataaaacgc ctgaatttgg gtcagaaagt gggcaaagca gataaagatc
      421 gttcgagctg tcttataaga tgataaatag atatcctttc agtccaacaa tgcaagaagt
      481 gcagttttgt aattcacttc cattggtttt gaatgcggtg agtcgaaaca atttatatat
      541 gttttcccat ggttagaaga tgtctttaca tacttgtcaa tagtagcttg acctttttcc
      601 ccactgagcg atgaagaggt gattttttct cctttttcca gaatacaga
//
LOCUS       KCPA01000322             436 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 35160tic ultra-conserved element locus
            uce-4423, sequence.
ACCESSION   KCPA01000322
VERSION     KCPA01000322.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 436)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 436)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35160tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>436
                     /note="ultra-conserved element locus uce-4423"
BASE COUNT          122 a           89 c           74 g          151 t
ORIGIN      
        1 ttttattaaa gaggcattat taactttgca gtggtgtatt tcactagctg cctcctataa
       61 ttaaaaattt tctctccaat cccctctcct gcgaggagcc tgttgcctga agatttaatc
      121 cttcattacc agttaaaaca aaatcaccaa ttaggcacat gaacacgtct gtattaatct
      181 cattaaggtg atggcaccaa ataaattgga actatttttg tgcttttact gtgttcctat
      241 ggctttatca ggccctgtgg tcatatacaa agaccttgca gctcagtcat ttagagtcat
      301 tcggttgtgg actaaatgtg gcattaccat ctatggctga aaattgcttt cagcttttaa
      361 actgcactga ctagtctgta gttaatctta gatcattcac ttgcaaaatt aaatgagcca
      421 gaacgatcgt cttttt
//
LOCUS       KCPA01000323             596 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 35269tic ultra-conserved element locus
            uce-2901, sequence.
ACCESSION   KCPA01000323
VERSION     KCPA01000323.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 596)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 596)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..596
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35269tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>596
                     /note="ultra-conserved element locus uce-2901"
BASE COUNT          170 a          108 c          141 g          177 t
ORIGIN      
        1 aaaatttatt ggttggaatg aaaaatattc aatacattaa aatgtatgat tccgtatatc
       61 ctacgccatt cccactgggt gtgcacacac atgccggtcc ccagtgtgca gtttatagtt
      121 tgcatcattc gtcactgctg agctgcagca ggccaggcca gcacatcatt tgttagcagc
      181 gacaaagccg cgctcataaa cgccgacatg ttacattaat ttataggcac tgagtgactt
      241 attaaatgtg acgtgtgaaa tataacaggg cccggtatgg atgattaggt tttgggcttt
      301 gaattgttga caaggcaggg gtaatgaatt gcgggacaca agctagcgtg tttccccctc
      361 attagtcagt attagctgca ttaatagtaa taattggata tattcatcat ttaaaatgtt
      421 ttaataaatg tttggacagc acctgatcta ggctgtcaaa tattagactg gaaggttcgt
      481 gatgggagaa aaattatgcc tttccttctg cagagattta tacagcccta agggtgccat
      541 ttgccaatgt cctttaatag gtaatgggtg ggagagagtt tgggagcaga cagtgc
//
LOCUS       KCPA01000324             451 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 35369tic ultra-conserved element locus
            uce-4483, sequence.
ACCESSION   KCPA01000324
VERSION     KCPA01000324.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 451)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 451)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35369tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>451
                     /note="ultra-conserved element locus uce-4483"
BASE COUNT          160 a           70 c           60 g          161 t
ORIGIN      
        1 aattccactc taagaagttt gttaaaaggg cctcattttc tcagggtgta tgggttataa
       61 ctattttttc aagcaccctt ctgaacttct tttcaatttt ctgtttttga tgatagtcat
      121 gctgacaact ttttttggtc catcaaattc tgtagtacaa ttacatgaat ttacttttaa
      181 taaattacca tctttgcata tatcagtcaa accatgaaga ctaaacactt gcaaataaaa
      241 tgcattatta atttaattgt cacagcctat ttagctagct tctattagta tttgctataa
      301 tatgcaatgt atcagagggc agaatcaaat tcaaaacaca aagaataaac tgattatatt
      361 gtcctagaga aattaaaaaa tagcaagctt gcaaaattag aatcaaagca ttaatgtttt
      421 acataggtaa gaaaactatg taacttaatt t
//
LOCUS       KCPA01000325             663 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 35479tic ultra-conserved element locus
            uce-6440, sequence.
ACCESSION   KCPA01000325
VERSION     KCPA01000325.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 663)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 663)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..663
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35479tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>663
                     /note="ultra-conserved element locus uce-6440"
BASE COUNT          192 a          123 c          159 g          189 t
ORIGIN      
        1 gggtgagtat ctgaccctgg agtaccttct gctgtctctg agaaccgcaa ccttatcaag
       61 aagcacactt gtggcttctg tggcaaagga tgacaacaaa agcaactttg tccaccacaa
      121 tgactgttca gaattgaggc ctggatttta aaacaaatgc atttggagca tagatgtgga
      181 aaggaggaga agcacaagtg ttgcttattg ggggccctgc agacagaaaa ttattgtgtt
      241 tctaacgcta ttgatttttt gcagcagctg atatttcaat ctgagtgcag catgtctgag
      301 agtctacgca cactgtcaag aagaaatatg atagtgtctt aaaagattaa taatatcact
      361 ggtcctcagg aggcctgtct taattcactg gcctgttcct tggcatgtac tgtaatttat
      421 ctagtctgat ttgaatagca aatggcaatc ggctgccatt agggaaatag gcatcagtct
      481 tattgatcca ggatgggctg gattttattt aaggagagct gcaaaatgtt attaacttcc
      541 ggatgagagg ctggaggtgg agatgtgttc caaggcaggg tgaattacac tgaatcctaa
      601 aagtcctgaa atagatagaa ctgctaccac tttgttttca aggacaccag ttattcccag
      661 cac
//
LOCUS       KCPA01000326             622 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 35589tic ultra-conserved element locus
            uce-1126, sequence.
ACCESSION   KCPA01000326
VERSION     KCPA01000326.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 622)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 622)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35589tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>622
                     /note="ultra-conserved element locus uce-1126"
BASE COUNT          217 a          114 c           75 g          216 t
ORIGIN      
        1 acaatgttct ttccaaaatg tcttcatttc ataactgcaa tacaatgaat gtctgcatta
       61 ggccatttta tacatacatt ttattacttc tgcagaatat atataaaatg tacgtataaa
      121 aaaatcagca cacttcaatc gaaaaggggt tacagcaacg agcttaactc tctatacttt
      181 tttctttaac aggatacttt agtataactt ttgttaactc agtagtacaa gctatctctg
      241 ttctacgttt ttatagctac aagagtgaaa tataacctac aacatttaca tttcacatat
      301 cttggtatac aaacagtact tagtgaattt gagccaagga ccaaaagact ctttaaaaat
      361 tatttcacca tctgatagag cttcctgtaa tttacactca gtttattctg caatcttcta
      421 aatcatttaa tctcatagtt tgagtttaaa tccattccaa ctggaaatcc tggagaaaca
      481 ggttactgca aactcttatg tatactctat atatacaagt taagtaacac agcgtaataa
      541 gacttagcta tttatcctaa aactgatata cacataattc actacgctag acgagtctta
      601 ggattttatt tctttaaata aa
//
LOCUS       KCPA01000327             492 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 35699tic ultra-conserved element locus
            uce-2802, sequence.
ACCESSION   KCPA01000327
VERSION     KCPA01000327.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 492)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 492)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..492
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35699tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>492
                     /note="ultra-conserved element locus uce-2802"
BASE COUNT          150 a           75 c          100 g          167 t
ORIGIN      
        1 aacattacaa ctgaagttat tttcagaaca tcatatggat ttttcattga aacatctgtg
       61 ttaactttta tcatcctagc tctgctttgt aattttggaa acagatataa agaatgagca
      121 acccagagca cagtaatata gtgggaagca tccttcataa gtcaattgag gaatttaata
      181 atctctttag aaataagctc tgcaactatg agaaaaatgt gtgggttaaa ggccttccaa
      241 ttaagaaagg tttctctgtg gatttatagg ctggtggtta gctcttcctg ttcgtgtttc
      301 catggcaact gtcaggtaga ttttctgcta cttgctagga agttggaaat gttgagtctg
      361 gttgagcctt tcaattcact gaagcttaaa tgaaattctt tgcaaggaac tggcatttag
      421 cctgggtcat ttattcatat ctagaagaga aatcaattat agtaatcaga tgtgcaatta
      481 ttttgggtag ac
//
LOCUS       KCPA01000328             702 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 35810tic ultra-conserved element locus
            uce-6859, sequence.
ACCESSION   KCPA01000328
VERSION     KCPA01000328.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 702)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 702)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35810tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>702
                     /note="ultra-conserved element locus uce-6859"
BASE COUNT          178 a          146 c          149 g          229 t
ORIGIN      
        1 acgatcacac aggtaatttg tgtacacctt tataggtaga catatcagag ttagttttca
       61 gctaaccttc atacttcgta gacagtttat ttcctagatt gatctccacc ctccctccct
      121 ctactccttg tttagttaat tcaacaaaga ctttttgcaa tctgtttgga gtttgtctga
      181 tgccgtggaa aagtagctgc tgatttattt ggttgctttt cgatttctgt ctctagcccg
      241 tcttttctcc tcctttcagc ggggatgtca gctgttatta cttcctattg atccctttgc
      301 aaagtgagaa gtgaactaaa attaatgtca attccactgc tcagatcaat agctggagtt
      361 attttaatct ggatttgcgc gaggtgctaa attaaaaaaa atcagcatag aggcagaaaa
      421 gtagcagctc ctcactccac ctgtgcccac tgccttccca gcacccaaat gttccctcca
      481 gctgattacc ctgcaatcca tattttaatt aagaaggtca gttagttttc ttatttttgg
      541 gttctgtatt taaacctatg acattttgac attgggagtg tattaacgat agattttcat
      601 aatgactggt ccgccgcagc ctaatctgtc catgttgctg gggggtgggg aggtgctggg
      661 tgagaaggga gcaagagaga acgaaaaagg aagtgggagc tg
//
LOCUS       KCPA01000329             789 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 35921tic ultra-conserved element locus
            uce-1392, sequence.
ACCESSION   KCPA01000329
VERSION     KCPA01000329.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 789)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 789)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..789
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35921tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>789
                     /note="ultra-conserved element locus uce-1392"
BASE COUNT          242 a          137 c          131 g          279 t
ORIGIN      
        1 agttacgcat gtgcactgac agaagaatag tgttcaaagc acatgaaatt tacatttttt
       61 ccattgctgt aattgagatg ttgacaaatt ggagaatatt gatgagcctt tgttttaagt
      121 atttcttgcc aagtttcctt tattttttca tggtttgaac aatggtgcag cagcaatgag
      181 taataagggt aaagataact ttgatttcaa tattttgatg tgccaataag aaataaattc
      241 ttaggcaaat ggaatatgtt gttttaatca ttagctatgc atgaaagaaa aattgatgtt
      301 gacatctttg ctgtaaaatc gttgtaatgg ggccttcctt acaattcatt tttgtaaaat
      361 tcattttgta cattttgcag caattgaaca atccctgcac tgtgaatagg cagaattccc
      421 agaaatactg agacagttgg cccagtaact gctgagctca cactgcacac cacatgcaca
      481 ttaaccatga tcatgccaga accagcttag ctaaatatag tcaaattttg atatcctccc
      541 atcctttttt gtttctgtca aaaaataaat gtttgctgac tccagcaatt aaataaagat
      601 gtgtgtcctt acccactgtt caataactag cattttcact tcactgtaca gttttctagt
      661 aatcaggctg gtagcaactg cagattcctc accttttatt aaattagtgt ttaaaatata
      721 tacttgcgtt caagttactc acttcactct taccttttaa tctatgtagg tttgtatatt
      781 tagatgtag
//
LOCUS       KCPA01000330             586 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 36033tic ultra-conserved element locus
            uce-5361, sequence.
ACCESSION   KCPA01000330
VERSION     KCPA01000330.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 586)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 586)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..586
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36033tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>586
                     /note="ultra-conserved element locus uce-5361"
BASE COUNT          149 a          146 c          109 g          182 t
ORIGIN      
        1 gtttatcctg aaacacatta atgaatttag aagttttgag ctcatttaac tcttgcagaa
       61 agaaacatta gcagtctttg acctcagtga tttttttttc cttttccctt caggtttgca
      121 gccaagactg tgcacagtgg gtcactgatg ctagtcacag tggagctgaa ggagagctct
      181 acagcacagc tcatcataaa caccgagaaa actgtgattg gttctgttct gctgcgggag
      241 ctgaagcctg tcctgtccca ggggtaacct gcttacatct ggacttcaga atctggcaca
      301 caacaaaagt gcctggcatc cactactgct gcctttcatt tataataata gcccttccat
      361 ctggcagtgg ggaaagaata cactcttgac attcttgtct tctgctttag aatgctagtg
      421 cgtatctatc atgtatgtgc ttgctaacca aagaacatat attttactgt cagttatctg
      481 cgcaatgtat ttcccatttg ttctacccta atccttccct ctctctccct tcccccacta
      541 ccttcccaac ccatcagttt cagtggacaa atacaaagtt caaggg
//
LOCUS       KCPA01000331             758 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 36145tic ultra-conserved element locus
            uce-6379, sequence.
ACCESSION   KCPA01000331
VERSION     KCPA01000331.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 758)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 758)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..758
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36145tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>758
                     /note="ultra-conserved element locus uce-6379"
BASE COUNT          262 a          165 c           86 g          245 t
ORIGIN      
        1 aacaataaaa ctctttctac catgtcactc ttccttctta aacacacaga agcctcaaga
       61 aacctccagg cactctaaga aaagaaataa ccaaatacca ccaaatattt aattttctat
      121 gccggaaatg agaaacaggt gtaattaaaa taacactttt taaattaagt gacctctctt
      181 gaccaaccat ctgtgaataa ttcagatttt tttcccatta ttactgcaaa attaaaacta
      241 gggcatataa atgacgagat cctctttaac tatctttaag caccagcaat atatattttc
      301 caccagttaa aatccttaat gataccaaaa atctgtcaag cataactccc ccaattcatt
      361 tgcctgaaac catcaatatt ttatcatgca tttgcagttg gctttaattt aacagtccag
      421 gttactaatc aaacaaaaca cccaagtcat taaaagttag cgtgccattt agaaagtgca
      481 tttcacgttt attaaaatat ctttcatgga gccattagaa ggctaaagtt ttaattacaa
      541 tcagatattt agttctactt cagttatgct tttggcactc tcttgcaact gccttgatta
      601 atcttccaga cagagctcat ccattacctc ctgaaattat tttcctctta acttcttcat
      661 aattcatctt ttttcttccc tccaaacatg taaaatgcat taaaaaggtg tgcacaatac
      721 ctgcctgaaa gataagtcat tagaaagatt ccatttca
//
LOCUS       KCPA01000332             484 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 36252tic ultra-conserved element locus
            uce-6527, sequence.
ACCESSION   KCPA01000332
VERSION     KCPA01000332.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 484)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 484)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..484
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36252tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>484
                     /note="ultra-conserved element locus uce-6527"
BASE COUNT          162 a           78 c           81 g          163 t
ORIGIN      
        1 ccaggcaatg cccagcctgc aagtctaaac tgtaatattg aactgtcctc agtgtggtgt
       61 agacataaat tctgttttgc ttttaaactg caagtttcac atccattagc tacatggttc
      121 ataattagtg tttggaccaa acaaagagtc aatatgatgt catgtctaga caacatgtaa
      181 attaatatga aagcaattga gttacaaatt ctatactaat acaaattaat ctgaattaag
      241 tttaatccac agttattaac tgattaaatg tggctgttgg tagctacagg gtgctgactt
      301 ccatctgtga ttattaggga cacagcttaa tcactgatgc tgcacagttt aaagcaaatg
      361 acatatacag tgacttctaa tgtttgttaa ttgaacgtag catctaagaa tgaaaattat
      421 aaatctacat ttttaaaata tgtagaaagt ctatcttgat tttcataatt agctcctgct
      481 ttga
//
LOCUS       KCPA01000333             691 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 36357tic ultra-conserved element locus
            uce-6997, sequence.
ACCESSION   KCPA01000333
VERSION     KCPA01000333.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 691)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 691)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..691
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36357tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>691
                     /note="ultra-conserved element locus uce-6997"
BASE COUNT          236 a          121 c          119 g          215 t
ORIGIN      
        1 attacaggtt tatagtttca taattattta atgctcgtta gatatatcta tttaagcaca
       61 cttcttctga tgcaagacct cttgctaagc taatttggag tgactccctg ccaaatcaat
      121 atcagtcttg tggcaaatat tattaaatat ttgtttgata cctatttaca agtaggaaaa
      181 taattttgct gccaagggat tgtaaatgtg tgaaaaaaca ctctgacagc ttacttcact
      241 cactgtctac aagccggcgt ctgcatgcca aagttggaag actaagatga agaacataat
      301 taaggaaaca tatgaaggct agcacagggt ttgagattaa ttagctgcgc gtcaataatc
      361 tcatcaatat ccgattaaca aatgacacat tgcccaatga aacatattga ttcattcaca
      421 ctccacactg ttaataaatt gaagctgctt tgctaaatga gaaagctgac aaaataatag
      481 cttcctaata cttctccagt attaaaaatg taaaattagc ccaaagtata cttaatttag
      541 cagcactgtc actacactta tgaagcttgt tagcacaata gtggggaatt tttatcaccc
      601 agttgttaga atggatgctg gatgcatgca aaagtaaaat ggaaacgtgt ttgttcagaa
      661 tagaattctt aggtgacata accttctgta t
//
LOCUS       KCPA01000334             844 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 36470tic ultra-conserved element locus
            uce-1342, sequence.
ACCESSION   KCPA01000334
VERSION     KCPA01000334.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 844)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 844)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..844
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36470tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>844
                     /note="ultra-conserved element locus uce-1342"
BASE COUNT          265 a          148 c          153 g          278 t
ORIGIN      
        1 ctggttctgt cactattatt gatataagga atccatcaac atatttttat ggatgattaa
       61 gaaaggctga cctttccttt gcaggtacaa ataggtagtt cttcagaggc tgtaaatgaa
      121 tgacaagata attctatcca tttaatattg aagtgatgtt gatagtatca ttcttctcat
      181 gtttgaaacg ggaaagtata gagacctttc tccctcactc tgttctgctt tatgtgatgg
      241 attttctctc tgactaatcg ctgtcacatt aacctgcact atttcatcct tcagagctgt
      301 caagataatg acgataatcg aagtggctca ttgtaggtaa aggaaattat atgagcaaag
      361 taatatcata aaacagtgtt taaatatttt aatttcattt gtcagggctg ccccaacact
      421 tcattacaca tataaccatc tctcatcagt agaattagtg cattattcat tactgttaat
      481 tattttcaca taatggctgc cctgatatat ttaacctcca cattatatct cagataatgg
      541 gcctgtaaaa ttgaattgtg tgaagagcgg agttctaaag ctcatttgca gaacatcaaa
      601 gaacaaagaa gaggaaaaga attctaaatg ggacatttca cccagctggg gccaaacatt
      661 tgtttctgtc tgatttgcat acagaaaata ggtggttcag aagtggttta acattgtaca
      721 tgctgtctgc tcctattaca tagccaatta aaatttgatg tcctgagtgt ttgagacaac
      781 ttgcaagcca atctattgtc tgatgatcat tggcaatgag ctaacagaag aaagtagacc
      841 tttc
//
LOCUS       KCPA01000335             473 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 36584tic ultra-conserved element locus
            uce-4349, sequence.
ACCESSION   KCPA01000335
VERSION     KCPA01000335.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 473)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 473)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36584tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>473
                     /note="ultra-conserved element locus uce-4349"
BASE COUNT          134 a          113 c          105 g          121 t
ORIGIN      
        1 tttagctttt catttccagc taaattcata aatgaaacta tcgaatggca ccaggagaat
       61 ctcctgaaat gctgaatgct gagtttatct gaaacggcag cacctgcagg gttaattaag
      121 cagctcaaga tgctgggctt cacaaaagtt tttcctactt taaggactgt aaacacttgt
      181 gctgaactag atgggcattt gataagctgt acagcgtgta gcaaactccg agggatctct
      241 agttaacact caaattcagt gttaacgctt aacagaacag tggtaagccg tgctgccaag
      301 gtcaactgca cagatgtact aattgtatta tgagcttgac atctagtggc cacccctggc
      361 agggcaaagc aggcaaaggt taaatcagca agccttgtca aagcacttct aactacccac
      421 cctcagggag aggctttccg gcgctccgcg atcccacctt ctggccggca ttc
//
LOCUS       KCPA01000336             902 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 36695tic ultra-conserved element locus
            uce-70, sequence.
ACCESSION   KCPA01000336
VERSION     KCPA01000336.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 902)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 902)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..902
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36695tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>902
                     /note="ultra-conserved element locus uce-70"
BASE COUNT          276 a          193 c          171 g          262 t
ORIGIN      
        1 gacaatgacc tttcatgtcc ttggagctcg ccatgacctt tcatctttcc tatcctccaa
       61 tggtctcttc taacaactaa aacgttaggc tgaattccag attgtcataa aaagcccctt
      121 cctttcgaaa caaaaccaat ttttacacca aggtggtgga gaaacacagg tccattgttc
      181 ccgcacagat ggaagttaga gttactaagg caacagctct aatccctctt tttaccacct
      241 ttttcacatc attggcctat caagtgtgct accttttaac tcataagctc aaaagctggt
      301 agtctaactg actgccctaa ttagctacga ttttcacagt acagacaaca tgatgagcta
      361 atcgaaattt gcaaaataat gacgtacctc cagcaaatat tcctcctcct gaggcccagt
      421 cttagaataa caataatgag accattatta gaggagggca ttaaaatgct gcactgctgc
      481 taaacagaga acttaattgt tctggtcttg tccattgaat caacaaccta ttgttgtgga
      541 cttgaaaaat aaaggactgg agaatgggtg ccataatgat tggtctgtgc tgccatacca
      601 gcactctgta gaattgtttt ccttttgaaa ctcttgatgg actagtagtt ttgtttaaaa
      661 gtaatataaa agccaattgt ctggataaaa agtcctattt attgaaatct ttagaagcag
      721 ttgcatggat ttgttcatga cccccaagat aaaaacatag ggaccataat aatgctattt
      781 gtggcgacca ctgcttgcag tgacactgct tgtagataac gctgccctgt ctagctactg
      841 cagaaggaag ggaggcattt cctttgcaga cagaaatcat ggcaaaaggt caaatagtgg
      901 ac
//
LOCUS       KCPA01000337             580 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 36806tic ultra-conserved element locus
            uce-2231, sequence.
ACCESSION   KCPA01000337
VERSION     KCPA01000337.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 580)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 580)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36806tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>580
                     /note="ultra-conserved element locus uce-2231"
BASE COUNT          194 a          106 c          112 g          168 t
ORIGIN      
        1 ctccattatg caagaaatat gttaggtttc ttctctagct aggcacaaat ggctggggaa
       61 agctggatat agtcccatcc tataaaccag aaccagaaat aaattaaaag atttataaat
      121 tggaggtgca attcttcagc tacattggtt taaagatggt gaaatgaatg actaaagcat
      181 tcactcacag tgttttatga agcagatcta atgtgcaggt tttgtgacct gcagtgactt
      241 taacttctca gtaaatcaaa aagcttaaca aatattaaga tggcaaagat tacctgtgtg
      301 tgccagattt tatcttttat ccgttatcat ttaggaaatg aaaagcttga gtcggaaatc
      361 agacagccgg tcacgtgact cgggcagtct ggcagcccca caagacaaga acctgcagga
      421 gacacagaaa ctacacattc actgattagt tttcagtcct taagaaatgg ctcttttatt
      481 gttattattg ttagcaacca atgagcttta gaatcagaaa aattcctttc taaattccac
      541 tgcgatgaaa attcattatc acaagctaga ggaagcagct
//
LOCUS       KCPA01000338             674 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 36917tic ultra-conserved element locus
            uce-4736, sequence.
ACCESSION   KCPA01000338
VERSION     KCPA01000338.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 674)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 674)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36917tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>674
                     /note="ultra-conserved element locus uce-4736"
BASE COUNT          200 a          103 c          150 g          221 t
ORIGIN      
        1 tgatgctatt gtataatgca gtcacttagg ggtcttcacc agcatgtgag agtgttggag
       61 tcacttagta cttagcttaa tgtttgattt tagcatataa attaaagaat atgtgtctgt
      121 gcttagatgt agctatatag ctggagagca agttcataaa aatgtctttc atttgcttct
      181 cctttgagaa gccttttaaa atgttgcgta gaaacactta gaaggttatc acaggtagag
      241 atgtcagagg aaatggacat tgttgtttgg tattaaactc atgtattcca gatgtgggca
      301 tttgttagtc agtctcctct aaaatgacat actgttgaat ctttaaaggg cttcagtttg
      361 ggaaagcaaa atatgattgg gcaaattgct aaaatattta aagtgcagcc tgttaaagct
      421 tttactgtga agagcatcac gtcagaagtt gtatgtggta aaagcaagta attggctttc
      481 catacttgtg ccagtcagtc agcatggggc tctgttccta tcccttctac ttcattgcag
      541 atgcctatag gaacttccat atgtatttca gagggatggg actggaaagc tgtgctggtg
      601 tcaaaaccct gtttaaaatt aaatgttatt ggtatagaag agagaaagtc attgaaactg
      661 cacccaacat ttaa
//
LOCUS       KCPA01000339             820 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 37027tic ultra-conserved element locus
            uce-620, sequence.
ACCESSION   KCPA01000339
VERSION     KCPA01000339.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 820)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 820)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..820
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37027tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>820
                     /note="ultra-conserved element locus uce-620"
BASE COUNT          237 a          157 c          181 g          245 t
ORIGIN      
        1 tctcttcctc tctctccttt tccctcacag aaaaggcatg tacatccatt tcggaatcta
       61 atcataggca acttaaatct ttctaacgtt acccacatta gtaattgcaa aataataaac
      121 atgacaaaat tcagattaat agggcatcct gcacaactcg gatggcgggg agagccctct
      181 ggaattctaa gagtaatagg tctgtgttta tttctcaacc aacagcataa tgtgactgat
      241 ttacaagagt ttaactcaag tgttaatctg acagtgacga agagcttctc agtggcagaa
      301 tcacttacac tatcatatta gttgcctcct ctattaaagc agtatggtcg ataattggaa
      361 tgcttttatg tctagtggtt ctgacaaggc tctctttagg tcacatatgg gcggtctggc
      421 ttgctgcaca gctgaacagt ggcaaatgat ttaaactgag aaagtattgt tctccttgta
      481 ttatggagca agggcagttc aaggaaagta agactctgca ccggctacct gctggtgtgt
      541 agtaaaataa gatggacatg atactgggtt gggagtacaa ttaaatctat tttgcaccaa
      601 tgtgttggtg gacagatgag tttccacatg gcagagcttt atgatcttta aggtagactg
      661 aactaataga ttggtgcgga gcgcactgaa gttactgagg atgagaaagc aagcagcagt
      721 acatttgaac tacaggtttc tcatatgctc cacgtcatgc tgagttttta tagctcctgg
      781 ctttcaaaaa gcctgtttca aagaggtttg cgctagactg
//
LOCUS       KCPA01000340             468 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 37135tic ultra-conserved element locus
            uce-3724, sequence.
ACCESSION   KCPA01000340
VERSION     KCPA01000340.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 468)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 468)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37135tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>468
                     /note="ultra-conserved element locus uce-3724"
BASE COUNT          150 a          102 c           86 g          130 t
ORIGIN      
        1 aacattaatt cttaacagac atcatctttc ccccgaattt ctgactataa tatatgcagg
       61 tacaaatggt gctgtcatct cgagctacaa agttattact tttaatatgc cactacccca
      121 ctgttatgta aaagaaaaat aaccttgtgt gacagtttaa cattgatcga tgtgcctgcc
      181 aaatgcaaag agataaataa gcaggtgatg aataaacagc acttcaagta aagacattac
      241 gctgcatgca taaaacgacg ccaggcacct aggagctgtg ggtggccgaa ggttggccat
      301 ttcatgccca ctcactaaag cagacttaat cgcttccaat attttctgtt aaaaagcacg
      361 cttaatgagc caatttcaca agcccagaga aactgattat tatctccgag ttccaactga
      421 gttggttgtt ttccaagagc cggtttttcc ttgacgggat aaaaacct
//
LOCUS       KCPA01000341             495 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 37236tic ultra-conserved element locus
            uce-2250, sequence.
ACCESSION   KCPA01000341
VERSION     KCPA01000341.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 495)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 495)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37236tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>495
                     /note="ultra-conserved element locus uce-2250"
BASE COUNT          154 a           88 c          100 g          153 t
ORIGIN      
        1 ctggtcactc gtgaccccgg ctggttctcg ccataaaata aaaaaagtgc ataaaatgaa
       61 gataaagtac ctccttcgag tctgacaaaa cccattcctc tgcagaatgg gagctgcagt
      121 gaaagtaaat aaatgaatgg acagcaatca cagcctagtt gatgaaactg ttcaattaaa
      181 gcacaggcat ttacatggtg taatttccct aaattgccaa tgagcccctt tagacacaac
      241 cagtgttcaa attgatttca gcattgattt tggctgaagc tgataaattt ctgcttgtta
      301 gttaaagtaa ttttgcagaa gactttgtag tgcagtattg aagtgttcat ttagctgatg
      361 gttaaaagag gagttattta cagagggttc tactgttggg ctgagatggg acaattcccc
      421 ggtcatcttt ttacttttaa tttttaagct gcagtatcca atcaatacgt tattgaaact
      481 gattaaaatg tatcc
//
LOCUS       KCPA01000342             391 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 37333tic ultra-conserved element locus
            uce-1966, sequence.
ACCESSION   KCPA01000342
VERSION     KCPA01000342.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 391)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 391)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37333tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>391
                     /note="ultra-conserved element locus uce-1966"
BASE COUNT          125 a           68 c           68 g          130 t
ORIGIN      
        1 gctaatatca tcatcctctt gtcagctgta ataggctttt cctcacagaa ataattcata
       61 aaaccgctac attatattct atccctgaca ggccctatct atcctgcaac ccagcaggct
      121 cacaactaat aagaaaatat gtggttcagg agccctgaaa aattaaacag gtagtttatg
      181 aacaatttgt ttcatgggga tgtttattat gtttattaaa tattgagcct ttaatgtttt
      241 cccagtacag atgatatcat aaaaatgctg acttaagcct cagttgtgtt cttagaaagt
      301 ggcattttat agctcttgta gtacccagta aataactaaa ttgctgtggt ttagatgtat
      361 acacagaata gaatttatag ggagtgagta t
//
LOCUS       KCPA01000343             586 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 37440tic ultra-conserved element locus
            uce-727, sequence.
ACCESSION   KCPA01000343
VERSION     KCPA01000343.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 586)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 586)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..586
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37440tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>586
                     /note="ultra-conserved element locus uce-727"
BASE COUNT          208 a          111 c           94 g          173 t
ORIGIN      
        1 attatttttt aaaggaatgt ctcccccaaa tgggaacaat ttccttctac acttccaacc
       61 aagtgtactt aacattaaaa gagaactgat agaacatatt taattactca aggttagact
      121 tctaattcct caattcacta aaggaaactt ggcaagaaga tgcatcattt tgctgatttc
      181 tactggagca tctgagggag aagagccact gaggcagcta atacacaaaa catgatcaaa
      241 agtgattaac aacagcttca tatgcaaatt gcattaatga aggagtgcaa agtcatcatg
      301 taaattaaat atgtcaaatc tcttggtgaa ctttcaatct tgagaagaaa aaacaccgct
      361 ttaatttttt tacatcatca attttccaag attgaaaatc taagaatctt ggtgctataa
      421 aacaattttc accttttttt tctccttcag cagcctgaca ggctggcctg atgtgtgccg
      481 aatgcacatg ttaataggcc aatcaaaaat gcaaaacaat tcgcaattac tgcaaggacc
      541 taatggtcat tagaatttac aactaggtaa tgaactaaag tctgcc
//
LOCUS       KCPA01000344             803 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 37551tic ultra-conserved element locus
            uce-1920, sequence.
ACCESSION   KCPA01000344
VERSION     KCPA01000344.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 803)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 803)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..803
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37551tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>803
                     /note="ultra-conserved element locus uce-1920"
BASE COUNT          223 a          153 c          143 g          284 t
ORIGIN      
        1 gatgcaaagt tcaccctaga gcgctgaatt tccattcatg agcatagtac atacataatt
       61 aatgcaatct gctgtctgtt atgactagag atgacagaaa tttatgtgac agctaccaaa
      121 tatgtatata tttggttgtt gtgtatatgg ctgttaatag gtttgactgt atctagcatt
      181 gatgatatgc caccaatgtg gtgaagttaa acccatccca cgtcttccag gcctggtgtg
      241 tggtagggct atccaatttg aatagctcct ttatgttctt tttcaaacca aacgttttta
      301 tttttgtcaa taaactgtgt catttattat agttaagaaa actcatgttg tttgaggtct
      361 ttatcagagt tcctacaaat caggttaatt ggtgatcaac agagcttttc tgcctttaat
      421 gagccctggt agcccaaggc aaggcccagc tcttgataag ggactttccc tttccttatt
      481 caggactctt tgatcacttt tttttaactg ggagaacaac cgcggggaat gtcattgttt
      541 tttaattgcc tgattaccaa atgttggaga taaaagatag atgttctcaa ttaataacat
      601 ttacatagat tagcatcact aacaagcctc attagtagct gctgactttt gtttagactg
      661 cgtcccatgt cagttgtgct ctgatactgc actggtaact acattctcca tattaaaata
      721 tatttctttc taacctcttt ccattaatca ggctatgaca tttttaagca caaacattaa
      781 tgttaactct tatttcccag agc
//
LOCUS       KCPA01000345             757 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 37663tic ultra-conserved element locus
            uce-4076, sequence.
ACCESSION   KCPA01000345
VERSION     KCPA01000345.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 757)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 757)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..757
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37663tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>757
                     /note="ultra-conserved element locus uce-4076"
BASE COUNT          222 a          150 c          148 g          237 t
ORIGIN      
        1 acagatcaca aacttcctcc ttgtggttgc tagtagagaa ggggcaagta actgtaatgg
       61 atgcattttg ccatttttat cctgtttgtg ctgccacatc ccggccatgc taatcgttag
      121 tgtttcgtta agattaaggg tcgctgactc ctggtgttca cattctggct ccttacaatc
      181 tccgttaata tgcaagtggc ggtagattga ttacacgcag gctcttatta ttaagcagaa
      241 cagaaaagaa aggaatttca aaatataatc ctccgctccc aggagtattt gtcttgttct
      301 ccatgaagtt aaaggtctga aataatgtgc ccatcaggag ctcaatgttg catgtccatg
      361 ccagttggtc caagggcttg ttatgatggt aatgacctgc tgaaacgtga gctttgatgg
      421 caacaataca attgctacca gctcacccgc tgggagaaat attttattat tgtcaaatgc
      481 cctccgcaga gatttgtttt gcctgttcct gtttaaatta aattcagagc agaactgcat
      541 tattatttct ctagagtata tttgaaataa acaactagtc tccaaattta ggattcctgg
      601 ttagtttaaa ttttcttatt agcagaaaaa ttacaatagg tgacaacata gctgcaggaa
      661 tattattatg gcagccattt gagagattta cacactgaga gcatggccta aaagcacaaa
      721 aactcccttc tactttacaa attccagcca aattaat
//
LOCUS       KCPA01000346             749 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 37775tic ultra-conserved element locus
            uce-3776, sequence.
ACCESSION   KCPA01000346
VERSION     KCPA01000346.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 749)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 749)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..749
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37775tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>749
                     /note="ultra-conserved element locus uce-3776"
BASE COUNT          218 a          180 c          141 g          210 t
ORIGIN      
        1 aacaaaatag tccaaaatat taactgaaac acatgctggg gtggaaacaa cctattataa
       61 aattactgta aagatcttca aactgttcaa gggaaaaaag tccaattttc cacataacct
      121 gagagcgctg agttttccga ttataagatc caaggaacct gtaaacccaa ggctctaatt
      181 ttcttatggc gactgcgtaa tattttgcaa agtaaaattg actgagatgg aagctatttt
      241 gcatggtaca gtggcgatgg ctaacaaatg agagttttgt gggctgaatg ttagtcccct
      301 gcctcatctg ccacccctaa tgacagcagc cacctgctgt tttattgtca cagctggagc
      361 cggttcacac tccttggtgc tgagctctgc ccatgagcgc caagctctcg cctcgcctca
      421 ttactttgat gaacttttta tggtcagcac ccatgaagac ctcatctagg actatacaac
      481 ctagatcggc ttcagggagt gcttccagct agcatgaggt gataatacac agtgacacca
      541 cggctgctac tgcctgccac ttaggcaagt cacttctggc tctacagggc cctcaacagg
      601 taaaatgcca cgaaattctc ctttacaacc aaattcactc cctttctttt cacattgaga
      661 gatcatatta ccaacattta gcttttgata ttacaatatg tatcgtgctg tttactgcat
      721 ataactacag acaagaaatc tctacattc
//
LOCUS       KCPA01000347             665 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 37883tic ultra-conserved element locus
            uce-5811, sequence.
ACCESSION   KCPA01000347
VERSION     KCPA01000347.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 665)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 665)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..665
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37883tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>665
                     /note="ultra-conserved element locus uce-5811"
BASE COUNT          208 a          107 c          105 g          245 t
ORIGIN      
        1 caggatcagg accttaatct tgtgttttat gctattcgtt gaccttggtc atgtacacgt
       61 ttattactgg tatgaaaaag tacaaggtag agtgaatgac attcctgatg cagggagaga
      121 tgtaacaaaa agaaatgtga gctttttaac tgttctaaaa ataacctaaa agtttgagac
      181 tagcttgcat tgatgtttac atgaagcctg ttatacataa ttttccgaag ctgttttcaa
      241 tcatgcaaat tattttttcc tttgcaatat gctaatgcaa tctgatttat ttcagttgta
      301 aaagttaatt acaatgtgtt tgtgagtccc taaagatgat gtattaaatg tttataacca
      361 ggattattaa aatgtcctgt ctcgattaca gtgcttctct ttcaaacact agaactaatt
      421 gtagccttaa atcacaacaa cctcaccgtt aaaattaaca caagggcaac attgcataat
      481 tttaattaat tttaatttgg ccaaagcaaa ttaatttttg ttttctagaa ggacagtttc
      541 cagcagacat ggagctcata aacccttttc aacatttgca tggctgcata tttacacttt
      601 aaatttcatt tgttttctca tgctctttct attttcgttg aaattactat atttatgtct
      661 gaagt
//
LOCUS       KCPA01000348             592 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 37996tic ultra-conserved element locus
            uce-154, sequence.
ACCESSION   KCPA01000348
VERSION     KCPA01000348.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 592)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 592)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..592
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37996tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>592
                     /note="ultra-conserved element locus uce-154"
BASE COUNT          176 a           75 c           87 g          254 t
ORIGIN      
        1 aaaaaaagtt attttttaaa atatggagtt ctgaactgca acttgactaa gaagcccctg
       61 ggtacaacag gtcctattgt ggccttttct gatgtgagac ttgaactagt cgattttttt
      121 gaaggctaac ctaacctcga ctatttgttg ttatgtgcaa tactgtttgt actgtttgta
      181 taaaagaaaa atgaaaagaa aaaaggcata aatctttatt gcagatttat tttcattgca
      241 gactttagac attgtgattc actaaaatca tttttctact gtcaaatatg taccttttct
      301 tcatgctggt attttttcaa tagtaatgta gcctttgtac tgagacaaat tttcattgtt
      361 atttttagaa agattttttg ctaagaaaaa aattaaacat atttacatat ttttcatttt
      421 tatttcgtat tttctttaag gagtgctttc tcaaccatta atatagttgt ttctgggaga
      481 gactttcata tctggtcaat gtcattaata ttattttgta tttttacttg gaataaatta
      541 attttatgat gctgattctt taagtttatt tttttcattt tcagttattt tt
//
LOCUS       KCPA01000349             797 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 38108tic ultra-conserved element locus
            uce-3387, sequence.
ACCESSION   KCPA01000349
VERSION     KCPA01000349.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 797)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 797)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..797
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38108tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>797
                     /note="ultra-conserved element locus uce-3387"
BASE COUNT          247 a          162 c          128 g          260 t
ORIGIN      
        1 tgaagatatg tttttctttc tatcttatga gctaattatg ccaacacaac ataacatttt
       61 cctaaatgcc ttataaactg acccagttac tcagaaagta ttatttttaa attgatgtga
      121 tagatgcaaa ctggaatgtt cggatttcaa ttctggcacc aattcccaga tccccttccc
      181 aagtaattta aggacttcct cccgatagtt tttcatattc ttttaactga cattttatct
      241 ttatacagta tctcagcaga atgaacatgc actaaaacaa tgacagccct tctctggctg
      301 tcatctctca ttctggcaaa gacagatgtc ttacactggc ttatgccaat aatagagccg
      361 acaaaaaaca acagagacta cctgcctctg atgtaaaggc accaattcac atttgtgaca
      421 ctcatttgtc aattaacaga tttcttccat tgttgacaca tgggacttaa aagatgtggg
      481 ctagaatgtg atgaattaaa aaagacagat gagtaagcta tgagctgcaa agtaatacta
      541 taatgtgctt tagataggaa tatcaactga cacccctgac aggccataca aggttttatt
      601 tcattttgct ctgtatctag gcttcatact ttgtcttctt tgttctcttt tcatcaagct
      661 cctaacatct cattctgaca gccagagaca tttaaggcac tttcgtttca aatgcaagtt
      721 agcatacttg atttgtcatt aaaatgcaaa acgattgcca ctgcaggtaa atgtaggtat
      781 gcttaaaagg ttgtatc
//
LOCUS       KCPA01000350             415 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 38207tic ultra-conserved element locus
            uce-3631, sequence.
ACCESSION   KCPA01000350
VERSION     KCPA01000350.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 415)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 415)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..415
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38207tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>415
                     /note="ultra-conserved element locus uce-3631"
BASE COUNT          118 a           85 c           82 g          130 t
ORIGIN      
        1 acatatatac agaattgagg gcatggagct cttactttct gaagaacgat tcccttgcta
       61 agccactgac tggaaggaga ggcaaaaatc ctcactgact tggcggccat gtcacacctc
      121 atttcactct ccctttccaa acagactgag tgttggtctt ctgagaatat gatgctaagc
      181 cacttttcct gtagagtttt taaactgggc ctctgagaaa gggtttgata caattcaatg
      241 actgaagtaa tacctttgtc catctgagca ttaaatggcc cattgaaata cagcttagtt
      301 agaaagaatt tcagtaaatg gtgctttcta attattatta ttattattcc cctggatctg
      361 aaaatgcagt tcaatcacgg ttgcctctta ggtcaggttt agccagtgct aatta
//
LOCUS       KCPA01000351             609 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 38319tic ultra-conserved element locus
            uce-2226, sequence.
ACCESSION   KCPA01000351
VERSION     KCPA01000351.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 609)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 609)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38319tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>609
                     /note="ultra-conserved element locus uce-2226"
BASE COUNT          195 a          135 c           91 g          188 t
ORIGIN      
        1 ttttgttcat gtgcacatct ttacatccac aaagaaattt tcaacatgga aaatactgtg
       61 gcttggaaag actaaaaaga tggtccctat ttttagcacc tccaggtttc agtcgttctt
      121 taatgaattt caaagtaaag catccctact ctgttgagaa ggtaatagga catttaaatg
      181 catttaggtt tagtattgtt tttaattggt atgtttatga tcaggaagaa gatccgtgaa
      241 aaggcaaaac attagtgctc ctactgagac ctctactaac ctctcttcct gagagcacct
      301 ctagtaaata ccctggagca aagtctagga tcacttacat tccagcaact ctcactggga
      361 attatccaat taaagcagca attcccccac ccccttttcc ctcataggtc taaaaaaata
      421 ttgcaaaaat caactactcc atattttaat aaccctggtt tctcgatgaa atgagaatca
      481 tacactgttt tcatctccca tttttcctcc tccaaagaga cattaaaaca tcattgtaca
      541 cacagagtct tgctgaagag atcattactg ataaacaagg gactagctcc ctccattttt
      601 aatcaatca
//
LOCUS       KCPA01000352             375 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 38427tic ultra-conserved element locus
            uce-6033, sequence.
ACCESSION   KCPA01000352
VERSION     KCPA01000352.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 375)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 375)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38427tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>375
                     /note="ultra-conserved element locus uce-6033"
BASE COUNT          104 a           91 c           77 g          103 t
ORIGIN      
        1 cccacggcaa gatgaatgtc cacctcccag cctggattta agcacgggaa ggccaataaa
       61 aggttgttat ttccgctctc ccgctttatc taaaacagcc agacaaaaca aatgaaaagg
      121 cttttgtaga aaatcttaat tgtggctgga cagttgtaaa ctcattaaga gccgaattcc
      181 agacagtttg cagacccgtc atttattaca cactcttaat gctgattctt tgaagttgcc
      241 tctgtctgca acaacagagg gcgtcccagc atccccaaat actggctcgg ggatcaatta
      301 ggggtgtgtg tgtgcatgcc agtacgagct ccctcttgct aattagaact catcaaatct
      361 tacctcggat ttttt
//
LOCUS       KCPA01000353             755 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 38536tic ultra-conserved element locus
            uce-205, sequence.
ACCESSION   KCPA01000353
VERSION     KCPA01000353.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 755)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 755)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..755
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38536tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>755
                     /note="ultra-conserved element locus uce-205"
BASE COUNT          237 a          123 c          146 g          249 t
ORIGIN      
        1 ccacagccca aagtgacttc tgtgtgcatg agaagcaaga aatctttgag aaaataaaag
       61 ttacattttc cctttgatga gtgggggttg gaaaggaaag ggaatatgtg accattcatc
      121 acagcaccag gctcgttagt acccaggaac tttctactct aaatgacaaa gagtttcact
      181 gtcactgaag agaaattgct gctgacctta gacctctttt tggaaagtaa aataatggag
      241 cacaggagca gagtttgata tttgaccgaa ttctacacaa ttatcatgca tgtgtatata
      301 ataaaattaa ttctgtgtct ctgcattgta gcctcaggca agcagcgtac aatcagtttt
      361 gtatgtataa tagatcacag agttgttcat gaataataca aatgcattga gcagatacta
      421 gtgagtgagg atgtttgtct ttgcatggaa tcgaagtgaa catgtaatat tgtgataata
      481 tatatttgat gaattcaggt ctgacttgcc tttgccatag cctgctaatt ccccgacaag
      541 ggttgccaca ataattgagt ttccaataac attatgatta tttccacatg ataatttaat
      601 tgtaggtatt ttttaatatc gtaataatgt agatttgtga ttattatgca tttgcatgca
      661 gattttcatg gtgtcttgga gcacatccct acatttataa cttaatttcc cctattattg
      721 catatatatt ttgggatgaa ctcattaatg caaac
//
LOCUS       KCPA01000354             547 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 38645tic ultra-conserved element locus
            uce-2981, sequence.
ACCESSION   KCPA01000354
VERSION     KCPA01000354.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 547)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 547)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38645tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>547
                     /note="ultra-conserved element locus uce-2981"
BASE COUNT          151 a          127 c          133 g          136 t
ORIGIN      
        1 cccgtgatct gtgcaggagt tcccctccca gtgcaggaga atgtggtgcc ctgggatgca
       61 gcaaacccct gaggggcctg cctgcccctg ccataccagg ctattcttta aaatatggcc
      121 cccaattcct gcatttatta caaatgcaaa ttacagatga aagcatcaac tacacaaacc
      181 attactcaga ggagcatctt tccaactgct ggacttggac tgaacagctt gtggttaatt
      241 tgctatataa tcactgcctg caacaggaaa gcaagtgctt caactgtgct aatattatga
      301 aaggggaagt taaccataga gataaattct gaggagctgc agctgggatg aaagcgggaa
      361 ataaatgtag ctggagtcca ggcttcaggc ttgcaaaagt ggccgcttgg atatttaaag
      421 ggataaaaga tttcaggtta aacatgtttt gaagttgctt ttagcctgga tatattttcc
      481 cagaggcaga ggctccctgc agctcccact gacccgtgac tcgagcagtg ccctggcctg
      541 tgcacag
//
LOCUS       KCPA01000355             429 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 38753tic ultra-conserved element locus
            uce-1215, sequence.
ACCESSION   KCPA01000355
VERSION     KCPA01000355.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 429)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 429)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38753tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>429
                     /note="ultra-conserved element locus uce-1215"
BASE COUNT          137 a           85 c           91 g          116 t
ORIGIN      
        1 cctgagttta cccatacaca aacagaatta gaagtttctg ttccgacacc acagtttcat
       61 atcattgtag tcagtgtagg aggtgaagac aagagacaat ttattctgca gctggtttag
      121 aaataaacac agccatggaa gataaggagt gaaagaggga taaatcctcc tgaagcaaac
      181 ttgatggaca gacaggctgc cattaacaat gctgttgcca agtacagagt gatgtggttg
      241 catttatact gtagacatgg tccttaaaga ttttacacct ccaattcctt agaattatca
      301 gctatctcca gcctgtcact catcctggca atcttagatt tctagcttgc aggccaggca
      361 gattattgac aaagcaatcc aggatgatat aatacaccct gacaaacaat agtgaggggg
      421 attgtgttt
//
LOCUS       KCPA01000356             734 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 38864tic ultra-conserved element locus
            uce-6690, sequence.
ACCESSION   KCPA01000356
VERSION     KCPA01000356.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 734)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 734)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..734
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38864tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>734
                     /note="ultra-conserved element locus uce-6690"
BASE COUNT          171 a          218 c          175 g          170 t
ORIGIN      
        1 ataatgggtg ttggcaaaat aagctttcat gatctgtttt catcattttt tcttctttcc
       61 cttctgcttt tttagggtga tcttgagttc ttcttaactt gctagtgctc agcctcctca
      121 tgcctccatc tcctttagac gacagggtag tagtggcact ttcgaggcca gtgagacctc
      181 aggatctcaa cctgtgttta gactctagct tcctcgaacc tgcctcttct gctggtgaga
      241 gccactccag tctgctcggc gcagctgtcg tgtccctaaa gactgctaat ctcacgtata
      301 tgccctcatc caacggctct gcacgctccc tgagttgtgg atgcagcagt gccagttgct
      361 gcactgtggc aacgtacgac aaggacactc aggcccaaac tcaagcgagc accagcccac
      421 gccggagcct cccccgcctg ccctgccaac caaatggtca acagcaatga gaacgctggc
      481 agcctgagcc cgctgggcgg agtggggagc cccgtctcgg gcagcgccaa gcagctcgcc
      541 agcatcaaaa tcatctaccc caatgatctg gccaagaaga tgaccaaatg cagcaagagc
      601 caccaacaga accaagggcc tgtcatcatt gactgcaggc ccttcatgga gtataataag
      661 agccacattc aaggggctgt ccacattaac tgttctgaca agatcagccg gagaaggctc
      721 cagcagggca agat
//
LOCUS       KCPA01000357             844 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 38978tic ultra-conserved element locus
            uce-2963, sequence.
ACCESSION   KCPA01000357
VERSION     KCPA01000357.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 844)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 844)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..844
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38978tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>844
                     /note="ultra-conserved element locus uce-2963"
BASE COUNT          227 a          166 c          203 g          248 t
ORIGIN      
        1 agaacattaa ttgcaagatc agctttaaat gaacttttta tccctgaatt aatttcctga
       61 catgtttcga cacgttttca ggtctagaca ttcactccgt acattcattt caaagtgtgt
      121 caacttggaa tgagatttag aggccaccag gcattacttc aattagcagg gtccgttctc
      181 ccatctgtcc atcatcattt actgggactg atggctgcat ttcctagaaa agtctttaga
      241 agataaagtg tatgcttttg ctgaaaaaat ttttgagctg tatgagggca cagcagagta
      301 atttggcacc tctgtgcgat tcggagagtc ttgcagagtt tgccagtcag ctcttaactg
      361 gagagagcaa gagagtgcct ggtggattaa cgttacggtg aagtatggga agctatattt
      421 catcgctgtt atggctgcaa gaacaaatgg tgtttataca gagaccttgg cagtgagaaa
      481 acagtcatta aacaggaatt aaggagcttg tcatcgccac ttcttttcag ttacagaaag
      541 ccctccaagc cgtttttatt gggcccctgt gaattttgca gtcagccggg ccagatggag
      601 ctgaatggag gaacagagtg gctttttgag gcagctcagc ttacactgca ggcatgttca
      661 gaggtattgc gctgctctct gtgcaaggag attaatgtcc tttctgttga tatttgataa
      721 tatctggcgt gcctttctgc aggtgacccc acgaaagaag ttcaaatgtc cagaatgcac
      781 agcaattgat gggttatcac tggaccagac acacatggtg gaaaggtgag tgaccactct
      841 ttat
//
LOCUS       KCPA01000358             535 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 39088tic ultra-conserved element locus
            uce-1305, sequence.
ACCESSION   KCPA01000358
VERSION     KCPA01000358.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 535)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 535)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39088tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>535
                     /note="ultra-conserved element locus uce-1305"
BASE COUNT          141 a          131 c          109 g          154 t
ORIGIN      
        1 cagatctcac ttgggttata tttaactaaa ctttttcacc tgccctgcct tcccactacc
       61 ccacagtggt tagtatagca cagagcttga tgcagccctg gttgaggtca agcactccaa
      121 ttcgaacctc tcaagggctt tctctgtgtg ttgccagtgt actggtaaaa atgactttaa
      181 actcttgtca gtgcagttac tggtgcatgc atcacagtcc cactcaaata aacctgtcac
      241 aacacagagt cagcagctag agaagagtac aagggcaggc ctctagcttt tcattcgagc
      301 atcactaaac gtgcacagag tgcccaatta tttcagcatt attgagcaag cctacaggag
      361 gacccaagcc ttgctacatt agattttctt tagtaatttg ctcaagtacc gctgaggaca
      421 ctcaaagggc ttaaaacggt ggctgcaacc agtttccttt tctggattgt taattcaggt
      481 tttctctttc aaattaactt tcactgcatg ctgtgcagta gcgctgggag aacta
//
LOCUS       KCPA01000359             578 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 39200tic ultra-conserved element locus
            uce-4703, sequence.
ACCESSION   KCPA01000359
VERSION     KCPA01000359.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 578)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 578)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39200tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>578
                     /note="ultra-conserved element locus uce-4703"
BASE COUNT          189 a           97 c          115 g          177 t
ORIGIN      
        1 ttgttggctc cggattctgg gtgtttgagg acacagtcat ttgccgtgct ccaactttga
       61 ggaagaattt ttcaattttt gacaaggccc ttagaatcac attgcagagg aaagggtgta
      121 ttataattat caatatcaat agtaataaaa gtttattaaa ggccattaaa atgaaagggg
      181 atggctatag atcccatcac tctgaattga ctccctcctc ttgtgttaat tagaaaactc
      241 agataatggt tctgtggggg agtgcagggg aaatttaatt acgaaagttt aatgggccac
      301 tatctacttc ctgccagatt aaaaactgat gatttacact attttagata ctactgaggg
      361 ctcactaaca aaatatgttg cagaacaaag agtaatgcaa gacttcactt ggaatttgct
      421 catttttaaa caaagatgaa taatgcagac ctgaaaacca aacagctgtg acagagctgt
      481 taccaccaaa aactgagaca aattgtgagc agtctttgtc aggttcttca tttattgttt
      541 attctaagta aatacatttg catagccaga aatgtctg
//
LOCUS       KCPA01000360             577 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 39306tic ultra-conserved element locus
            uce-4115, sequence.
ACCESSION   KCPA01000360
VERSION     KCPA01000360.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 577)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 577)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39306tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>577
                     /note="ultra-conserved element locus uce-4115"
BASE COUNT          176 a           93 c          104 g          204 t
ORIGIN      
        1 tgagcttctt tgtacaatta aaacacaata tcccttctgc agctctgcac tgaatctggc
       61 actataagct tgtctttaaa tttatataga ttgagagata tatatttaaa tttctgttcc
      121 tcttaagggt aaataaattt attaaaataa gctatggctt gtatagtaca gtataacaat
      181 gataaatgat gttgtgtgta atttttctac tattaacata aagtaatata aactgaagga
      241 cactagtcta ttgagagagt tagtagctaa tgttccatat cagatgtgga caatgtcagg
      301 actgaataca gattaggcag tgtccttttc tccccagggg aattaaactt tgagacacca
      361 ctggctgcca atggttttac tgcattttgt tggtgcctgt ggtgcctttc ttggtctatt
      421 aattcagaag ctgtaaatga caatgtgagc aaaaaaagct tttccagtgg gatgcatttc
      481 atttatgtat tcttggaact acagtacctt ttcaatccat tttgtcacaa taactgttta
      541 aaaaaatggg tagattatct gtgctttacc ttacccg
//
LOCUS       KCPA01000361             731 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 39419tic ultra-conserved element locus
            uce-2122, sequence.
ACCESSION   KCPA01000361
VERSION     KCPA01000361.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 731)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 731)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..731
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39419tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>731
                     /note="ultra-conserved element locus uce-2122"
BASE COUNT          226 a          123 c          136 g          246 t
ORIGIN      
        1 tttaatggtt acatttttca ggcttataaa ttaatttgaa ttacccaata ttacttaatt
       61 tttccctagg aaagcttctg cttgcccgag caatattata actgctaatt caattacgct
      121 gaaattgttt aatagaaaat ataattgctt attcatacag aatacccatt aaagaagtgc
      181 aaaggcctat accctagggt tactgcatat tagtactttg ggaattcaga ggggattgct
      241 gggtagggaa ggtgctgact gatctttaat tgttcatcac ctgcctccaa aataatatga
      301 atggacccaa actaaatgac cactcattac aagtttcaat ttaggagctt ggctgaggtc
      361 agcagattgc ttatgctgat cgcaatgatt tgaagttgtg attaccataa gcaatttaaa
      421 ttttattgat ctacccttct gaaagttgta attgagcata gatgttggac ccgtagctct
      481 ccaaactaaa ttgtactctg aagcccttgc tggattactg caagaatcaa taagcagtca
      541 gtcacattaa caatgaaata gctccattaa catacagtgc tactggtgaa actttattta
      601 ggaggggtgt tagttcactt cattgtttta tcaatgaatt tcagttgtac agggaaaagt
      661 atagcttgtg tacgcctaat gagcttgcat aatgataatc tgatatgctt taactatgag
      721 tctttttatg g
//
LOCUS       KCPA01000362             386 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 39525tic ultra-conserved element locus
            uce-3449, sequence.
ACCESSION   KCPA01000362
VERSION     KCPA01000362.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 386)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 386)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39525tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>386
                     /note="ultra-conserved element locus uce-3449"
BASE COUNT           91 a           94 c           71 g          130 t
ORIGIN      
        1 aacttacctt tcccgagacc tggatctgga atgactcctc cctctggatg acttcctctc
       61 tttgcgttta tgcctctcct caccattttc agatgaattt aggctatctc ttcccttgtc
      121 agaagaatgc tctttgtcgt tgtggtcttc agatttgtgc ttcttggagg acttctcttt
      181 ggattcatgt cttcttgcct gttttaagaa gaagttggtt ctttcaggaa aatagtgcaa
      241 caaagagagt tagtatgggt atcagaagat aaaaatgcta agttgtgatg caacattagt
      301 aaccttagga gtgcgactca atccctaatg ccaccaacta cccaaagttg caaatgcaca
      361 cattttttcc ccctttccct cctccc
//
LOCUS       KCPA01000363             609 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 39636tic ultra-conserved element locus
            uce-1333, sequence.
ACCESSION   KCPA01000363
VERSION     KCPA01000363.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 609)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 609)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39636tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>609
                     /note="ultra-conserved element locus uce-1333"
BASE COUNT          162 a          138 c          124 g          185 t
ORIGIN      
        1 atctggagta ataacaccag agagctgtca gtcagccatc catccatcta attggcttct
       61 taccatcttt ccatcatgtt ttttttataa ctggtcgcct ctggctaaaa tgcaaatcat
      121 gaggaagagc cgtctagaaa aagctgctgc tttcttaatt atctgtcaga gtatggacca
      181 gtggaccctg ggccgcgaag tggagttatg ctaagcagaa aggcatcatg ggaattggag
      241 tgacagctca tttttttttt ccgcgttcga atgacaatgc agaaatacgg gtttttccca
      301 cactttctct gaacacctgg gccaatgctc aggggaacac aaagccaaaa ctgtcacatt
      361 tccagacatg gtcttattgc tgtcactgtg acaggattgt tgacaaatgc cagcagtcat
      421 ctcagcatct tgggaaatgt ctgccgtggt tgtgtcaaca gcctgacaga aattgttaat
      481 gtttaaactt cttccactga cagaatcctg tcttgctgac agtatttgtc atatgaaact
      541 caatctttgt caaacttgct taaaaattaa cacttcctcc atttcttttg cagctaactg
      601 cctgtgtgc
//
LOCUS       KCPA01000364             569 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 39748tic ultra-conserved element locus
            uce-7621, sequence.
ACCESSION   KCPA01000364
VERSION     KCPA01000364.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 569)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 569)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39748tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>569
                     /note="ultra-conserved element locus uce-7621"
BASE COUNT          160 a          131 c          119 g          159 t
ORIGIN      
        1 tttttaaaat gaatcctact acatggtcag atcagataaa caaagagttt tctcttgttc
       61 ttttgtggtt tctcatcctc caataggcaa ttgtggattt taaaaaagca gaaggtgaaa
      121 ttctatttgt catcaatttc tcttagggga tacagagcag aaaactgcag acaagctgcc
      181 tctttgatgg ctcactccta aaaatctctt tttgttcttt atctatttga actgacagtg
      241 atcagagcta cagcaggaca ggcctctctg gagaaatcac cttccccctg tctattgaca
      301 gattcctctg ttctgaatca gacaggcctt gtcccatcat aggcatcaag gccttggaag
      361 tagccaccaa ttaaacctct tgagccagta aaatctgaag ccacttttga gtgtctgttc
      421 tgattaggca ggatgagaca acagagcagc tccctggtct caattttctc tctcaccagg
      481 tgcgagaggt gtgagaggag cttcacgcaa gccacccagc tgagtcgaca ccagaggatg
      541 cccaatgagt gcaagccaat aacagagag
//
LOCUS       KCPA01000365             439 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 39854tic ultra-conserved element locus
            uce-5198, sequence.
ACCESSION   KCPA01000365
VERSION     KCPA01000365.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 439)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 439)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39854tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>439
                     /note="ultra-conserved element locus uce-5198"
BASE COUNT          124 a           90 c           55 g          170 t
ORIGIN      
        1 tttcttgtct tgctcaagat ttaacaaatc ctttgcaaaa ccaccaattt attagatttt
       61 cttttttctg cttttggatt ggtgatcata tctctttgtc ctgattttaa aatattttac
      121 tattgaaaag ctaatgtgct acaccttgtc ctgtccttac tactagatac aaaaccagat
      181 tcctggagcc atatttccct ttgtgttcta tcctattaaa cctccaaagt ccatcacctt
      241 ggattcaggt ttgctagttt aacataatcc ttcctactga agttaaccat ttttatcact
      301 tttatcagtg agctttctga ctacagatta gaagtaagga agcttacctc tacaaccatt
      361 tcaatagtta acaattacat ttgtcactat tttaagagca tgcacattat ttcattgatt
      421 ttgggaaaca tataccatg
//
LOCUS       KCPA01000366             558 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 39962tic ultra-conserved element locus
            uce-7734, sequence.
ACCESSION   KCPA01000366
VERSION     KCPA01000366.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 558)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 558)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39962tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>558
                     /note="ultra-conserved element locus uce-7734"
BASE COUNT          181 a           88 c          112 g          177 t
ORIGIN      
        1 tttagtactt catgagaatg cagctggatg tccatcagaa aatggattgt aaattcagtt
       61 gaatatgaaa ctaccaggtt acaatccaaa gaaaatgtag tttcagagaa ttaataggct
      121 gtgtttttct cttcagggta aagcactacc ccacttgctc caccaccgaa gcctattcgt
      181 agaaggttaa aatcagaaga tgagctaaga cctgaagctg aggaacatac acagaaaaca
      241 ggtgtcatag ctgctgttct tgcttcacag ccatctattc ctaggtaacc caagaagtat
      301 ataaatacat ctgttactgg aaagtttaca tttaaacaca atactttctg ttccaggagt
      361 tgcaggctat ttcagtgtgg attaattcaa caattttttt tggtttttaa agaaggtcat
      421 aaagcctata ttactgggag aaagagattt tgattttgga gtgtgaactt tttaacttct
      481 gcaagtatgt tggaaataag tggtggaagt attaagatgt tttaatttta aatggttgct
      541 ctgaacagtc caaaatgt
//
LOCUS       KCPA01000367             485 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 40071tic ultra-conserved element locus
            uce-1068, sequence.
ACCESSION   KCPA01000367
VERSION     KCPA01000367.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 485)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 485)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..485
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40071tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>485
                     /note="ultra-conserved element locus uce-1068"
BASE COUNT          170 a           75 c           95 g          145 t
ORIGIN      
        1 attttgagga aataggacag agcatccact aatcaatcca aggtaatgac ttatttctca
       61 aaacagaatg aagaaaggca ggaaagtaca tggtagggaa agtattgcct tgaaatatgt
      121 tcaaaaacat tttatgaggt cacactaaag agtaattgga agaaaaattc tgcttgtcta
      181 agcgaagagc acatttgtag cagtagggta aatgttttat cgattgggaa actgggaaac
      241 tcaagtcatt actcaccatg ggctaaagaa taattgctaa tgctctggcg gaaagattaa
      301 aaacagtttc tggaagtatt tcttacaatg atcaatggtg tatcatccca ggccattgga
      361 tcttcaataa catttttccc ttttgggata caatcaattt ttataatatg attcatttgc
      421 cagcaggcat gctttcttca tgcaatgaaa aggcacttat gcaccttata ttgttgaaaa
      481 ataat
//
LOCUS       KCPA01000368             446 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 40178tic ultra-conserved element locus
            uce-1326, sequence.
ACCESSION   KCPA01000368
VERSION     KCPA01000368.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 446)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 446)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40178tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>446
                     /note="ultra-conserved element locus uce-1326"
BASE COUNT          134 a           84 c           74 g          154 t
ORIGIN      
        1 tcttgacaag atcagagagg ttttgagtaa ggcatttgcc tcaaatctag gctattaagt
       61 gacacaaact tctccacaat tggtgttaac ataattttat tccaatattt tccttctacc
      121 atttagtaat ctttgccagt ggctgactag cttgaagtct ttgaaacact gagctttcta
      181 taaaatccaa ataattctct gtaaatcaaa gtacttggca tgcttgctgc aaagcctgaa
      241 gctttttttt ttttaaggta atctctagaa agtagtttgt actcatgttt tcacagtgat
      301 taaatatgca aagtaatttt catgattatc accccgttct gaaccaaatc agatgcggct
      361 atgcttctct ttatacaaag ccagttattg gatcagattc caaaacaaat cccctgaatt
      421 tggcggatca tcattttaaa aggggg
//
LOCUS       KCPA01000369             592 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 40286tic ultra-conserved element locus
            uce-1064, sequence.
ACCESSION   KCPA01000369
VERSION     KCPA01000369.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 592)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 592)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..592
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40286tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>592
                     /note="ultra-conserved element locus uce-1064"
BASE COUNT          190 a           95 c          133 g          174 t
ORIGIN      
        1 aacaacttct aaataaagtg aattgcgaca tgaatttata gcaaaacttt gcgtattagt
       61 ctggtaaaat atgttggagg tggggaagag agcaagctgt tgtaaactcc tataaaactt
      121 caactttctc tccattctaa caagtgtaaa actattgagg ttaagtaggt ggggcaaccg
      181 gaagtaattg ctaaggccag tggcattttt gtggtttaat aaaggcagaa gctaattatt
      241 cagtttttat ttaagtgaaa tgatgccaaa aaggaggttc ctgtggagca gctgcactcc
      301 ttcagtgtta ccctaattta ccacagacac aactgtcaca aatagaactt ttaaacttga
      361 tatatagcca cgaaagtaag gagccctttg tctggaatgc atgcagaaga actcctttat
      421 acaaatcaac cggcagatga cggacaatga tgaaaatttg attctttgaa gtcataatgg
      481 tcattgaaat gtgtgaaatt ctggtattga aaagagagcg gctagcaaga ctctaaatcc
      541 tgggtggttg ctggaagctt gctgggaggt ttttctgtgt tttgacatca ac
//
LOCUS       KCPA01000370             811 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 40392tic ultra-conserved element locus
            uce-5210, sequence.
ACCESSION   KCPA01000370
VERSION     KCPA01000370.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 811)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 811)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..811
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40392tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>811
                     /note="ultra-conserved element locus uce-5210"
BASE COUNT          275 a          187 c          141 g          208 t
ORIGIN      
        1 ccatgacctg gagtggagtg agacttctcc acctcccact cctccagcac tgagagctga
       61 gccgcaattt cactgtttta aaaccaaagg acagaaacag agacttgtct aacgcttgca
      121 tatcttacaa caaactgcag tttttccaaa aggatgttaa aaatagaagc ttatgatctt
      181 ttcccaccta gaattgtatc cttgcaatta aagactatta gctggcatcc cttttaaccg
      241 tcaaactcag acagtggcag ttctatagcc acaaagagaa gcagtaaatg agaagaacat
      301 gttactacac tgcatttgag aaagtttggc tccaagctat gcactgatta atatcagatc
      361 tccttcttta cttgcctctt gacaatcttg tcacatctgg ctgacaaatc cttacaagct
      421 tatccaaacc aaggcagccc agatcatgct ccgggagtag cttggaggaa gcggcaacac
      481 cagccatgta ctgatgtgcc atcatgaaac taatgaagct gacttcactt gcagactgca
      541 ggaacacgaa gaaacacaac atgccccaag gttttgcaac ataacgcaga gttagctcac
      601 caaaagataa gacaaacaat cagctcccga ggttcaagaa gccaagtagt tacatgaatt
      661 acaaaaattt ataggaattg cttgaacaac aatctcaact aaatgagcac aataatccaa
      721 cttcagatca gatgtgaaaa ttgactgtta aatgcctttc aaacaatggt ttgttttaaa
      781 ttaaaacaaa actagtctaa ttttctctct c
//
LOCUS       KCPA01000371             296 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 40499tic ultra-conserved element locus
            uce-5033, sequence.
ACCESSION   KCPA01000371
VERSION     KCPA01000371.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 296)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 296)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40499tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>296
                     /note="ultra-conserved element locus uce-5033"
BASE COUNT           77 a           64 c           61 g           94 t
ORIGIN      
        1 cccaaatggc tgggacaggg aagatgctgg catccgctga agaagttgaa gccttctctt
       61 tcccctccat ttctgcgccc agccctttgt cgacacttga tcatttacat caagttgaca
      121 ttcgcagagt ttactcaggg gtctgtaatt gtattctttc accggttctg cattaccaac
      181 catgaaaatg gaatcttatc atccttgacc aatttttaat gtacaaaatg atttggccga
      241 ggttcaaagg gagtcacaat tgaaatcagg tgaatgatac atgtaggttt tttttt
//
LOCUS       KCPA01000372             685 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 40609tic ultra-conserved element locus
            uce-4806, sequence.
ACCESSION   KCPA01000372
VERSION     KCPA01000372.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 685)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 685)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40609tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>685
                     /note="ultra-conserved element locus uce-4806"
BASE COUNT          215 a          120 c          190 g          160 t
ORIGIN      
        1 agctcatccc gcatgttctg gtcatcgtag ccgaacatgc ccaggaactc attcatggtg
       61 gtggcggcgt aatcccgcag tgatgaagct tcccctgccg tgaaaccaga ggagcacaca
      121 aggcactgac tcctcccata ccagcactag tagggggggc aggaagggga gaggggaaca
      181 tgatctactg acgtttggct cacttgttag gttttatgac tcttaaatta atttgtttta
      241 agaaaaaagt aattaatact ggggtaaaat aaaaagagtt catcaatgcc aggaaaatca
      301 atttcctaaa tgttctagcc gatggctttt cagtacatta aacaaagttt cataaatgtc
      361 tctgcactct tgccttggcc taatatgaag aaaaagtaat tttactggaa gtgagaccaa
      421 tgccaatatg ccaaggtttg tacagatctg tccttgtgta tatttgtgta tggaaggagg
      481 tgcacagagg atagatggca gcatgtgtgt atgtgttggt gaagagcaag caggagcagg
      541 caggacagca tggtgtgaaa tggataagca cgacaacgta tggggtggag cacgaggagg
      601 gaagaatgga acagtgcaga agaaggaaag cagcggagct ggagattaat caagacagag
      661 gaagagcagc aaagagaaac ttgtg
//
LOCUS       KCPA01000373             600 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 40715tic ultra-conserved element locus
            uce-540, sequence.
ACCESSION   KCPA01000373
VERSION     KCPA01000373.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 600)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 600)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..600
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40715tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>600
                     /note="ultra-conserved element locus uce-540"
BASE COUNT          173 a          144 c          122 g          161 t
ORIGIN      
        1 atttccttgc cggctgctgc acgacctcat tagtcattaa tttccactcc tgtgaccttc
       61 atgtagccag ccaggtgggc agtggtcagt ctggaaacct tacctgattc tgcagaactg
      121 cacttccagc gtgtgctaaa actggagaca gcacatttat ctggttcttt agaaaatggc
      181 tttaacagaa ataagtagat gttcttgcac ttgtcattga gaagcactct gcatttattt
      241 ggcacttaga acaggagcag cagcagcagc attgcccttg gtgctgattt cttactactc
      301 taaaacgtct cctctgagcc agaatccact ggctgttgct gctcatgctg tgagacacct
      361 gcactggcta ctgggcttgt catgacgcac aaaaccccac catcttcagc ttgacattgt
      421 gcaagttata attattcatc caaatgaata tgtcagagca gcagcagcag acctctcatc
      481 agagcaaaag aaaaatacat caaaacatta tcaacccagc aggaagacag ggaccataag
      541 gaaaattacc catttttaat atggatgcca taaagccatg tctattatta tacggaaggg
//
LOCUS       KCPA01000374             726 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 40826tic ultra-conserved element locus
            uce-4154, sequence.
ACCESSION   KCPA01000374
VERSION     KCPA01000374.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 726)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 726)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..726
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40826tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>726
                     /note="ultra-conserved element locus uce-4154"
BASE COUNT          233 a          127 c          130 g          236 t
ORIGIN      
        1 aattttcctg agagttctgc agaaagctca gttatagccc agtgctattc tgtgctttca
       61 aaaaaagctg agtgtgttta gagtaatttt tccataatgc cagtatctgc gacagattac
      121 attactacac acacctgcat ttgctctgaa cctgctagcc tgataaattg ataattggtc
      181 atatgttgtt ttaaaaaggc aaagaacata gttcctaata aaagaatgct acatatttct
      241 tctaaaaggt taaaaagcat ttctcagggc tcttaaatta ccatattctg ataccagggg
      301 aaaataaaac ctgggcttac agtcgtgttt gtacttagag ggctttccgg acaggaaggc
      361 aatcttgatg caattcagta agccacaata ccagtggggc attacaggtg aaaaaattgc
      421 agctgtaccc ctcaccacaa tgtattacaa ctgtacagtg gaatatttcc tgtacagaaa
      481 tagggcttgg ttaactttct ttcccaagag tagatcacat taaaatgtta taaaatcatg
      541 atttcctgca tttgaatagt tgtggtttct caactggttc caatattaca aaaggttttt
      601 tatagcttct attagttgaa gatgtataga agcccaaagt cagctaaaag gaagttatgt
      661 atttttaaag aacaaatttt ctcagaagac aagagttttc tttcacatct cttctatttg
      721 atattt
//
LOCUS       KCPA01000375             704 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 40936tic ultra-conserved element locus
            uce-6873, sequence.
ACCESSION   KCPA01000375
VERSION     KCPA01000375.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 704)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 704)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..704
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40936tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>704
                     /note="ultra-conserved element locus uce-6873"
BASE COUNT          234 a          138 c          148 g          184 t
ORIGIN      
        1 ctgcacagtt gcacctgatc tgctgcttca tgcaaaggaa gcattggaga aatgatttga
       61 gttatttagg tgacctatat gatgttgcat gttgtcctaa gaggacattt tatagctcta
      121 tagggttatg tctgttgtgt gtatacacgc acacacactc tcacatacat agaagagagg
      181 aagtcatttt attttaccca aatcagctac ttaagtaaat tgagatatat agaatttacc
      241 aatgaaatga gtgatttgat gtgaataaaa gaggtggtgt gttgtaaatc agtactgaca
      301 gccaaatggg aaaaattgac agagcactgt aatcactccc aacatccact gaagttattg
      361 atccaaaacc tctataatcc ccttcacata acacaagcaa tttcatataa tacctgtaat
      421 aacagtgcat tcaaactcaa gtagccatca gaagctttgt atctaatggc aaagcaggcc
      481 tctgctgagt aagtgtaaca actagagcac aaaaacgccg atgactcttg cctttcatag
      541 gtagcggcct gcgataagag ctagttcaga agataaacag ttcccaacgc aaggaaaatg
      601 agctattaat tgccctcttg ctaaagacat cataagggcc ctaaagccct gggtgcaaaa
      661 cagggagaag gtaagcagga tttggggact gataacgccc cggg
//
LOCUS       KCPA01000376             367 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 41036tic ultra-conserved element locus
            uce-2325, sequence.
ACCESSION   KCPA01000376
VERSION     KCPA01000376.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 367)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 367)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41036tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>367
                     /note="ultra-conserved element locus uce-2325"
BASE COUNT          104 a           81 c           78 g          104 t
ORIGIN      
        1 ggtcatgcgc agagcacagc caagcagtga gactgagatt gtattgacaa gaacaagatg
       61 aatggccccg tggagactat ggggtttgta tgctcgtttc caccaccttt tcatcccttt
      121 gtaccccctt tcagttcata tgcagattaa accaagtcca cactaaatgc tctttttcgc
      181 tttagttttg gaaggtaggt ggaggatcta aatatttatg aggcctctgg tttatgatgc
      241 actcttgttg aatgttgagg aattacgtta atgaatgcat gcctgcacac acagacacag
      301 aaaccaggca aaactacaca aagcattgtc agctctaatg tcagcgctta ctaaaacagt
      361 tcccatt
//
LOCUS       KCPA01000377             679 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 41146tic ultra-conserved element locus
            uce-7622, sequence.
ACCESSION   KCPA01000377
VERSION     KCPA01000377.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 679)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 679)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..679
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41146tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>679
                     /note="ultra-conserved element locus uce-7622"
BASE COUNT          214 a          136 c          126 g          203 t
ORIGIN      
        1 actaattagt ctcagagatg aaaaacgcat tgctcagatt ccagataatc ttaaacaaaa
       61 cacttcatgc tgattttatt ctgcttctat ctgtgcaaag attaaacaaa acccacagtt
      121 ggtttcatct gccaggctct tcatgtcaca ggaagagaaa aataaatcca aggcaaggtt
      181 tgcagtgctc tgagtttgct catccttagt ttatcttctg caaatgagca cgtataaaac
      241 agtccaccta ctgttctagt tgctacgata taatgcagtt ccactgaatg atcctgttaa
      301 cctaaccttc aatttgctgg gatttgaact ctgaattaca gcttactaac atagtttaac
      361 agctggtaca agggcttctt ttgaattttt aatcacatga attaaagatt gctggagatg
      421 cttttcagac ctccagtagc agtgatccaa tgtacagaaa gacaagtata ggtagcccca
      481 tgaggattaa gagaacaaag gtactatggc ttgtgaagct atgctgctct ttgcttgaca
      541 aagcaggaat actggtgcaa attattcaaa gataaattca cattatggct ccaaatggcc
      601 ccctttctag ctcacaacat agcgtgcatt gccagagcac aggttttgaa gataaagctt
      661 agtttagcaa aatgtttct
//
LOCUS       KCPA01000378             425 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 41249tic ultra-conserved element locus
            uce-6726, sequence.
ACCESSION   KCPA01000378
VERSION     KCPA01000378.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 425)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 425)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41249tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>425
                     /note="ultra-conserved element locus uce-6726"
BASE COUNT          145 a           71 c           73 g          136 t
ORIGIN      
        1 atgacatttt cactctttag aagaaagagc aatattgttc cagtgtgcag agaacatatg
       61 ctaatcagct gtactcttca ggcacaaatg agataatatg ctcattgttt agacactgga
      121 attgttcatt acaaaatgac acagtgtttg ccaattttgt cttcattata aatgtaaata
      181 ttaactggtg atatgcaaaa gaatacaaaa agtcaacagc aattaattgg cttctgcagt
      241 aattagcaac tgtaaggcaa acacttagga gccgttgtaa ttgtctgcat taggaataca
      301 cctcctgtac agatctaatt agcaatttaa atagttcaga aattatatgc ctcttgcctt
      361 tacactccct gaagtactgt tcattaatgg ggaaaaaaat tgctagtaaa tgtcatttgc
      421 attgt
//
LOCUS       KCPA01000379             639 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 41362tic ultra-conserved element locus
            uce-596, sequence.
ACCESSION   KCPA01000379
VERSION     KCPA01000379.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 639)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 639)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..639
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41362tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>639
                     /note="ultra-conserved element locus uce-596"
BASE COUNT          194 a          110 c          135 g          200 t
ORIGIN      
        1 ctgcctttgt atccaggagg agtgttccag tcctgatttt tactaatgtt atgatgcttg
       61 cattataccg tgggtcttta attcatttct ttgtgaagcg gtagctttta acaggttaat
      121 gacaaaaaga agcagaacca taataaaaag gcacagctcc tgcactttta agaaacagaa
      181 gtgcttaaaa gcgttatttt ttatatgagt tgttcttgct tagtttttaa agtgtgactg
      241 gtgtttagtt aaatctttta cagactcagt tcactgaagg tgacagaagt actcacttga
      301 gctcaatgaa aagtagacat gacagtaaat ttttcagtca gagacaggag atcttgttat
      361 aggagtcagt atgggggtca ggacagagcc tgttgatgat tgaggaaaag agaagtaaat
      421 tcattctgct tcatgcactt tgtcaagtgc cagtagctta ccattgagaa ctagtcaccc
      481 gttctagtct tacagcccta gaggtcactc atttgatata aatcatagca ctgcataggt
      541 tcagcaacct attgccattc cagatgaaat aaaaagagag gaatgcttca ttcggaatta
      601 aaatggctgt gaatatccca ccacatgttg ctgttcaat
//
LOCUS       KCPA01000380             797 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 41475tic ultra-conserved element locus
            uce-1849, sequence.
ACCESSION   KCPA01000380
VERSION     KCPA01000380.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 797)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 797)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..797
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41475tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>797
                     /note="ultra-conserved element locus uce-1849"
BASE COUNT          241 a          166 c          152 g          238 t
ORIGIN      
        1 gttcgctgga aaatggaacc actcagtaca ctttgtgtaa aatgttgaaa cttttaccat
       61 taaaaggtgt caacagtgaa gctttcactg cagtatgcct gattttaatg catctacagt
      121 aattcccagt cagttgtcta tgctatgaaa tgaatgcatt tgaaccagaa tcgttctttc
      181 tgcatgccac atgctcatcc tgtccatgtg cctagcaagg atgagcttca caaggccttt
      241 gggatcagcc ttaagtgctc aaaaagatga ggcaggcagc acctacttgt tacatggaca
      301 gacacaaaga ccacagaatt ttcctaggtc cgtcaaattc ttttctgctt ctttcatgtc
      361 cttattgatt tggtccattc cctcttcgat gcgttccagt tgttctgatt aaacacaagt
      421 attttatccc cacagaatga agcagatgga aaaggacaaa gaaaaaaaag acaaaaactt
      481 cagacattca ctgtgacaaa aaactggaca ccacatagca gagccggtac ccagtaccta
      541 cttgttacaa ggacatatga aaaggccaca gcatttccct aaatctttta aatttttctc
      601 ggcctccttc atgtcttggt tgatatggtt catgccttct tcaacacgat cgagttgttc
      661 tggtcaggac aaagggatga cagtgtggaa tgaattgtat ttttgtttgt ttgattttgt
      721 cttcaacaga acatgaaaaa tgaccatgta gaactgagtt aataatgaca atacaatgca
      781 ttaatctgag ctgatgc
//
LOCUS       KCPA01000381             687 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 41586tic ultra-conserved element locus
            uce-4705, sequence.
ACCESSION   KCPA01000381
VERSION     KCPA01000381.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 687)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 687)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..687
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41586tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>687
                     /note="ultra-conserved element locus uce-4705"
BASE COUNT          207 a          130 c          128 g          222 t
ORIGIN      
        1 tttccaagca ttccacgaag ctttctattg tttctgacaa tgttggaagt ctttagattg
       61 caagaacaga gtacacattt gaagcttaaa ctgtgttgtg cccagtcttt gagtcacctg
      121 tacaacgtca aatccattct attttggaag ttgtggtaga gcaagagtgt agtcctgttt
      181 tcctcctccc actagtgagc taggaacttg cactattgca tgtgggctgt caattagcat
      241 tatctccatt tgttttagat cgagacaggc ggtctgtttc aacaatgaac ctttcgaaac
      301 atgttgatcc agtcataaac aagcggctct cctcctcatc tgcaacatta ctaaattctc
      361 cagacagagg tacagttttg aagaaaagag cagcaagaaa gaatgttcta ttactttgca
      421 cataaaacaa gcttctgaag tcattttctg tacttcatct aagtggcagt ggaaagactt
      481 caaatgtgac aagtaaatgg ttgaacattt tttcctgtga gaacaaataa ttcttgtttt
      541 ttaaaacaag agaatttacc taaataattc tgctttagca aatgatgtgc ttctgtcagg
      601 tttttagtaa atgaggtaca actattgaaa gaacacatca cttcatagtg catgcaacat
      661 gtgtgacatt gtatttccat tagacca
//
LOCUS       KCPA01000382             575 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 41695tic ultra-conserved element locus
            uce-5817, sequence.
ACCESSION   KCPA01000382
VERSION     KCPA01000382.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 575)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 575)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41695tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>575
                     /note="ultra-conserved element locus uce-5817"
BASE COUNT          160 a          130 c          138 g          147 t
ORIGIN      
        1 tcatttcatt gtcattactg gggagccacc agatgcttgg gattccaggg gataaacctt
       61 tcaaaagctc cattgacact ggggtatgtc aataattcca cgtattagtt gcatgcaaat
      121 actacacaat aaggtatgga aagaaactgt aattgggaat accactctat cttctgactg
      181 agcccattgt tgaactccag gctgaacctc cgacccttta ctttggaggg acacaatggg
      241 ctttgatatg agatggtggg aaacgggctt ggaggctcat ttcacattca gctgcaattc
      301 atcagcttgg ctgggacttc tagcagcttt aatgaccact gcaattgatg gttaaatcaa
      361 tttgtgacgg tgacagcatg gctggcccct agactgtaac aattcgggat tacaacaggc
      421 agaaagggcc ccgttattca gacatgcgtg gtttctgctc agctcagagt gggaacaaca
      481 gcaggacaaa gtctcacaaa aacactggag aatgcacaca ttcactccag ttgactacac
      541 accaccatgg cttctttgta gcgtgacgag gcggg
//
LOCUS       KCPA01000383             298 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 41795tic ultra-conserved element locus
            uce-4810, sequence.
ACCESSION   KCPA01000383
VERSION     KCPA01000383.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 298)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 298)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41795tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>298
                     /note="ultra-conserved element locus uce-4810"
BASE COUNT           77 a           47 c           85 g           89 t
ORIGIN      
        1 gtcttgtgtt agcagtgggc tgtttcagat tatggtaatg tgtttctgat ttgagttgtg
       61 ttgaaagcca gaacaaggca tctcatgtgc agtcctcttt gaggcctgct gttttcaatt
      121 cctcttcaca gaatgggctt ttatttgatt tgttatgggg attttttctt ctgttgccaa
      181 aacagctgca agcctggaag ggaatgagac acaaggccac agcaaacttg ttagctcata
      241 agagaaacag aatgttccag ggagaggaag atgacggggg gagaggtgag agaagtga
//
LOCUS       KCPA01000384             642 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 41905tic ultra-conserved element locus
            uce-8029, sequence.
ACCESSION   KCPA01000384
VERSION     KCPA01000384.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 642)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 642)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41905tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>642
                     /note="ultra-conserved element locus uce-8029"
BASE COUNT          190 a          127 c          120 g          205 t
ORIGIN      
        1 tgggagaaga taacagcttt attttgtttt catggttaaa gcaagccata aaattcttca
       61 taactgagca tggttgagac atgcagcccc atgattccaa gtgtagcatc atttatatcc
      121 ataagcagat taaattttaa aagttctctc aataccgctg accagaggaa caatgtcatt
      181 gttagaaaac acacgcactg gttaccttat aatcaaattt tcactgccct ttctgacagg
      241 tttttaagtt acttaaggga tctatttata tgtggaagca tcaacatcat gcagtaaatc
      301 caaccacaac tcagtcacat attttattaa gtttaagttc agtgaaagtg cagagtaaac
      361 tagggcccta tgtctctcag ttacatctga tttgcggttg ctataaaaag gcccacatgc
      421 cgctctttca gatgtgtttt ggattgaaaa taggattaat gtgctaaagt gtgattagaa
      481 tggttaaaca cgattaattg gaacagactt gtattgccaa gggagctccg ctgttactgg
      541 ccagcctcca gtttaccaag tgaacaaagc aggccaactg tccaagtttt tccatgtctt
      601 tgcttatgtg ccttttcctt tgcattttct catagccagc tt
//
LOCUS       KCPA01000385             633 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 42014tic ultra-conserved element locus
            uce-5164, sequence.
ACCESSION   KCPA01000385
VERSION     KCPA01000385.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 633)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 633)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42014tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>633
                     /note="ultra-conserved element locus uce-5164"
BASE COUNT          191 a          138 c          103 g          201 t
ORIGIN      
        1 gtggctattt tgaaaaaatc ctctggttac ttacatgaac aacacaaaga aaagagttaa
       61 aagtggcaca ttatctttcc agtgacatat ttagccagtt attcaggtat aatgaagctg
      121 tgtaatgaag tcaatgtcct tgagagttct tcatcaattt ttttctcatc tgtcagcata
      181 tccacttgcc gacacaatat taattaaaca caacatttcc tggagtgttg aagtgaagtc
      241 ccatcactga taatgaacag gtttaggaga gtcacatccc aacaaaatta ctttttaaac
      301 cagccttatt aagcagaaaa ttagacctaa atcaccctac aacatcctca ttaaaagcca
      361 ctgatccttg gctgcttcta tgttctaaca tctttaatta gcaaactgct agtctatctg
      421 ccatgataaa tgctattaat cttacctttc atttgctttc tcttaaccta tcatttgccc
      481 acttcaggga acacaggctt ccaccaggac tcgttttact gtgtttaatg tcctcgtaag
      541 gatgaaaaat ggggcagtca cgggttaaat gcaatgactc tctccgccct cgctccatca
      601 ctgaatttca ggatttgtag atatcttgga tgg
//
LOCUS       KCPA01000386             564 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 42123tic ultra-conserved element locus
            uce-7959, sequence.
ACCESSION   KCPA01000386
VERSION     KCPA01000386.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 564)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 564)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..564
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42123tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>564
                     /note="ultra-conserved element locus uce-7959"
BASE COUNT          172 a           96 c          119 g          177 t
ORIGIN      
        1 gtcagtgagg aaaaaacccc tcagttggct gagttacgtt ggtgagatgg ctgtttcatt
       61 ccataaagtg tctgcagtgg atttgaacag taggaaatcc aagggtgata aatagctatt
      121 tctaagtaaa tttcatgcaa ttgccctttg gttaaagtct ttcctctcag cactttcctg
      181 tgcacatagc ccaactaata atattcagga gcaagtgctt tccagtgtga caactgattg
      241 cactttgaag cagtaaatgg ctgatttcat aattggtata atttttcaca agtacctgaa
      301 tgtcatatac agaaagaata agcaacctgg acttaatacg ggagcttttt caattctcct
      361 aaaaatcaat aatgtattaa acccctctaa ctgattaaaa taatgtgaac cctgagtagg
      421 ttttgtgagg aaggcaggtt tcttcaaggg tggcagattt atggcaaaag ggttaataca
      481 tggggagaac agggatacgt tacagatgga gtccgttttc ctaattaaac ttttatcaag
      541 attttcccgg tttgaattgt ttca
//
LOCUS       KCPA01000387             708 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 42235tic ultra-conserved element locus
            uce-5021, sequence.
ACCESSION   KCPA01000387
VERSION     KCPA01000387.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 708)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 708)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..708
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42235tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>708
                     /note="ultra-conserved element locus uce-5021"
BASE COUNT          252 a          103 c          140 g          213 t
ORIGIN      
        1 tccctttaaa ggagaaaacg gtaaattaaa tttagctgtt gagaaagaca acatcagaat
       61 taaactgaag agaataataa ttgcatctaa tagaactgac aaacaatcat aattcttccc
      121 attaaataaa tacgttataa aaaatttatt atgaaatgcc acattatgca aggcaggatt
      181 caaagatgag ttctttgcat taagtacagt agatgccatt aaggaaaaca gtcaatatgt
      241 cactaagcca cggcctgtaa aattaaattg atttggtaaa tgtaagtaag atagatctgt
      301 ttgctttcat catcaatttt gagtgggtga acaggtgatg tcaccaacct gggagcgata
      361 aagatgcagg accatctgga aagctttgtg atggatgggc aactgctttt ggatagtgac
      421 agtgctgtgg tactttgtca cttgggatgc agtacttaat aacttttcaa taccatcata
      481 ataaatttca ctgccttatt aatatagaaa tggtgagtta ttactgtgat ggctattgta
      541 aataacaaga gatgcagctg tcagaagctg attgtttggg catgtttctt taagcaacac
      601 agttgacttg ggataatcaa cggatgtcta tatcagcaga gtttattgct cttgtcaaaa
      661 gaaaaagcgg cattattcaa aaattatatg aagtccataa taaacaag
//
LOCUS       KCPA01000388             588 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 42341tic ultra-conserved element locus
            uce-5292, sequence.
ACCESSION   KCPA01000388
VERSION     KCPA01000388.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 588)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 588)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..588
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42341tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>588
                     /note="ultra-conserved element locus uce-5292"
BASE COUNT          155 a          126 c          137 g          170 t
ORIGIN      
        1 gggcgtgcag gggtgctgct catcacaggc aacataaaca atgtccttgt taggagctgc
       61 tccaaggccc tgcaaagaag ttggctgctg gagccaagca gaagctggga ctgtgcctcc
      121 ccctgggctt tagcccctcc tcattaagca ggtccgggct attgattgga agcttgtgtt
      181 tggaagagtc ttacttactc tatgcattat cttgacagat tgatcagacc tgattgagaa
      241 cctcttaaag gaacgaacag ctgtaatggg aaagttggac tctgtcatcc gttaggatga
      301 ttctgggagc gagaagaacg aggctgacat cttggagcaa ttgtatttac aattaacatg
      361 gctgaaaacg attgcctcta ttgatccccc cttcctgcaa ttacagcccc attgtttaca
      421 ttccagcact tcagttataa aaaggaaatt caataattat tgcattattt aaagttaaag
      481 tgccacagag tttgctggct atgcttgctg gttgatttaa cgttcagtaa aatccatgct
      541 gagctctcca tccttaggct gagcaatatt tggcttttaa tgagactt
//
LOCUS       KCPA01000389             298 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 42441tic ultra-conserved element locus
            uce-6030, sequence.
ACCESSION   KCPA01000389
VERSION     KCPA01000389.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 298)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 298)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42441tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>298
                     /note="ultra-conserved element locus uce-6030"
BASE COUNT          116 a           49 c           59 g           74 t
ORIGIN      
        1 ccccccttcc ctgaaaaacc aggggaaagt gaaaactgac tccattaacc tctgtcatta
       61 cctaaatcca tctcttaatt aatatgagtt aatatgatta atcaaaataa tgagacaaac
      121 ctattaaatt agggtgttta aattacaaat ggaagtggta aaggcaaagg ggctgataac
      181 gaatagctgc agtcagagat ggggctagct cttgaaatga tatgtgacaa acatcagaga
      241 gaatcaagaa tgagggaaat cagcaagatt catgtgagaa aaatattcta catgcata
//
LOCUS       KCPA01000390             634 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 42552tic ultra-conserved element locus
            uce-1989, sequence.
ACCESSION   KCPA01000390
VERSION     KCPA01000390.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 634)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 634)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42552tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>634
                     /note="ultra-conserved element locus uce-1989"
BASE COUNT          187 a          130 c          121 g          196 t
ORIGIN      
        1 acctcagtca ggttttctgt gaaatacaaa gggtacaatg gctttcttct gcctgtgcca
       61 tgcctgaaca gaggaaaaga gtttcactcc tgttgtttat tgattttcta gattaagaat
      121 cccagtgaga gaattgtaac agacaaccat aaaattattt ttggtgtgct tatttgcctt
      181 tcccttgcat ctatttggcc tgtgcctgta gacaattatg cgttccagcc tagactcagg
      241 tgctaataat gaaggacaaa tagaatcata tgtgtaaact tccccttctg atgaaaattt
      301 atattaactt tctgccactg taaacagaac tgcatagctc agcgtccctg aagaattggt
      361 gatgaattca gtcatttata tcccaggaat ctgtgcattt atgggaaaag atgaaaaccg
      421 tctgtattgt gtaaccttgc actttttgag taagaaaaag aaaacaccag cctgtttagt
      481 tcatcactta aagtgtgtaa atttcagctc aaataccaga tttctgtagg actcgctttc
      541 actttgggga tccctgccaa tacaaacaag ccaaacagtg cagagtgcca tgttatcggt
      601 acaactgtga acgtatacac tcgcagcctc ctat
//
LOCUS       KCPA01000391             473 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 42657tic ultra-conserved element locus
            uce-1442, sequence.
ACCESSION   KCPA01000391
VERSION     KCPA01000391.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 473)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 473)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42657tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>473
                     /note="ultra-conserved element locus uce-1442"
BASE COUNT          119 a          103 c           73 g          178 t
ORIGIN      
        1 cctgatatcc tgcaggtgaa ggcttggctc tctgctgatt tcttaaaaga aaaatcttat
       61 attttactgc tcacatgtac tctccagagc gcggtcacat gaccaggata atgacaatct
      121 gtctctctgc taacatttct ctactttggt tatttgtttg ataaagtgag gagcttccct
      181 tttgttgccc ttcatcagag cttaatgtct ttactttggg atcaatatac tttatgaata
      241 attttatttc cttctatttt aatggtcttt tctcctcatt atcatactga gtttattagc
      301 tggtgctgtc agtatcttta ccctgtcata tgttcctgag gtacagtaaa tatcacttgt
      361 gttgtaatta atatgcacac cctctgcagt aattaaagca cagacccctt caaccagctg
      421 agcttcctac actaattcca ccttatcttc ataatgaact tattgtaatc tga
//
LOCUS       KCPA01000392             730 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 42765tic ultra-conserved element locus
            uce-1810, sequence.
ACCESSION   KCPA01000392
VERSION     KCPA01000392.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 730)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 730)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..730
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42765tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>730
                     /note="ultra-conserved element locus uce-1810"
BASE COUNT          229 a          115 c          127 g          259 t
ORIGIN      
        1 tgattaggtt aaacaaactg gtaggtttat ttatctccct aatatattat cagagaaatg
       61 ggaagcaatc ttcttttgtt tcttactcct gtgatcatag aacacttgcc aaagttatgg
      121 ctagccaaaa agacagaaat aaatttgcta aaaatataaa ccttctgttt agcagagttt
      181 ttgagccata ttttgaaatt gcagggccat gtttacttca aatcaagctt atagtcaagt
      241 ttgaggcttt gtttgtatag attgtcctga agtagatcct gatatttaat taaaatgaca
      301 ctaaatcaca ttgaattgat aagacttggc atctgaaaca aaggtaattg cccgtattgg
      361 ttttgtacaa aaatagagct gcttggaaaa tgtgcagcca acacagactg tcaactccat
      421 ttatagatca atatgtgaaa accattgatc aggcaggcat gtgtaacagt aacactttgc
      481 atttatttgt tgtttttata ccacgttaaa gcttacagga ttatcggctt ccaaaatatt
      541 ttgacttcct cataaatatg ttatctgttt aatgttaatt gcaagacagt ctccatccct
      601 cttttagagt attttcagtt tcattgctat gggtagtttt aactcaaaaa gggattattt
      661 caatctctgc gagatcatca gagcttcttt tatagtctag tttatttaag gaaagttttt
      721 gaggatagct
//
LOCUS       KCPA01000393             608 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 42873tic ultra-conserved element locus
            uce-2480, sequence.
ACCESSION   KCPA01000393
VERSION     KCPA01000393.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 608)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 608)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42873tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>608
                     /note="ultra-conserved element locus uce-2480"
BASE COUNT          213 a          114 c           81 g          200 t
ORIGIN      
        1 aattaccaaa tgtattctct tcatctagca aaatgaatgg cattttcctt gcaaaggaaa
       61 ttcctaattt tgagcagagg aagttgaaat taatctgaaa accaaggaaa tcactctgca
      121 atttgcacac aaaaatgatg ggtttgtttc attaactgat tcctgaaaac aacatttaaa
      181 ttgacacata aaaccagcaa ttgtcttaat ttgtgtggtg cactccacac aaaagcccta
      241 aatatgttca aattagagca agctgcttga ttgtcactgc agtctcatgt catattaatg
      301 catgacaaac attaaaccat acacttaaat ggcaatttat atcatttaaa tgtttactgc
      361 cacaccagat catcactcat ttaaatgtga ctttctgaca gctaatttca gttaattttc
      421 ctcgattcac ttaattagaa ctttcaatca agaaaagacc tgtacatatc ttagacatca
      481 tatcattctt tttttattat tacttttatt aggatacaga attgctgaaa gtattcttta
      541 aaatgagtca tcgcacagta aagtatctgt ttggatgatc acatagcaat accttacaac
      601 acacatgc
//
LOCUS       KCPA01000394             631 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 42986tic ultra-conserved element locus
            uce-535, sequence.
ACCESSION   KCPA01000394
VERSION     KCPA01000394.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 631)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 631)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42986tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>631
                     /note="ultra-conserved element locus uce-535"
BASE COUNT          203 a          147 c          109 g          172 t
ORIGIN      
        1 atccctagga cacgctctta gcacttcaat gcattagcga acctttgcta acgaagaaaa
       61 aattaaagta cagcaaattt caaagcacca gttgtacgca acatcattaa aaatttataa
      121 aacttcccct gaacatgaca agtgtttggt ttaaatgaag atcagccata agaaggagca
      181 gaaatcttgt tattctttgt ctctttctct tctctttctc gcagacctcc cccaaccaca
      241 accacctcaa tccagctgaa atatgtaacc attacagagt gacagtttga cacacaatga
      301 cctgtcagaa cattcatctc tcaatgtttt attttagtga ggagccaaac tgcagaaaaa
      361 ataagcaagt tgtttcaagg cttggaatga gatcaaacat ttctggcatc cccacttacc
      421 agacctttga tttacaatgg atctgtcaga ggctgattag acagtgtgtg tttaaaaacc
      481 tatagatgtt ccacaattgc acaagctctc cccttccctt gcatttctgc tctttgtttg
      541 aatggagaga ataagccagg ttagcctgca gaaccggaaa acaccacatg caaaactgca
      601 ggcagctgca attaaacctc ttaggcagga g
//
LOCUS       KCPA01000395             686 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 43094tic ultra-conserved element locus
            uce-780, sequence.
ACCESSION   KCPA01000395
VERSION     KCPA01000395.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 686)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 686)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..686
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43094tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>686
                     /note="ultra-conserved element locus uce-780"
BASE COUNT          222 a          123 c          120 g          221 t
ORIGIN      
        1 cagcgtcaaa tgctttgcac taatcaaggc agatgtcagt tgcttttctc ttatcctcca
       61 acaccgtgtt ttagagggcc acaaaatttg tcagttcttg gcaagttgct ttttccatcg
      121 actgcaaaca acgtgcttaa gttctctcag tgcatagtag tctaaaataa ttgtagaaat
      181 ctatggataa cagagtaatg tcatttcagc agtgtttcgt cctgcatcag aaactaaagc
      241 atgcaaaccc aaattgattt gtaacaggta ccttattaga agcaaacatc aagaaaacta
      301 gaatcaatgt tgaaacaaaa atttgtcttg taagcaatcc tgagtgaaat gtgttgacac
      361 agcatcacat tctgtagttt ttgcatgttt ttcaaagcac agccatctcg atctgggaga
      421 gatgaataat tgactgatca ctgcataatt caacgtactg ttgtaaaaat tcaaggtctg
      481 gcaaatttga agcttttctt ctttattgag actgaggtta aagtttcaat caaccttgaa
      541 gaaacattta aatagcacaa ggatgcatga tttattaaag tgcatattat tctccttctt
      601 cattaagctt ccttacataa tgtttatgtg aagtttataa agtgtacctc ataagttgag
      661 caaagattac cttaaaagat ggcact
//
LOCUS       KCPA01000396             547 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 43204tic ultra-conserved element locus
            uce-857, sequence.
ACCESSION   KCPA01000396
VERSION     KCPA01000396.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 547)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 547)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43204tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>547
                     /note="ultra-conserved element locus uce-857"
BASE COUNT          181 a          107 c           93 g          166 t
ORIGIN      
        1 caagacctag ataaatattt caaaaactat actatttgtg agcagagcag gtcactacca
       61 tttcccagtg catttggagt tcatgtgaaa taagggcaaa agagtgatga gctgcatttt
      121 taacatgggc atatacagaa tagttgtcta gctgatagag aatgtgtaat gcaacatctg
      181 caccgtacgc cttgccaaag cccatcccaa ataaatgtag tgcattctcc ctagtgcaat
      241 taactcttgt actctggcag gttgtgctag aagatcatca aggtagatta ccttccagca
      301 tatgaactaa atacttacag gtgttatatc atcagttatt acttacaaac ttctgcattt
      361 aacaagacat ccaggcaaat gaatgatcta atttatgaat tatttataag aatttcacag
      421 catgctcctg gcgtcatcca tggccttttc caggtcatat gacaccaatt agagctgaat
      481 tttaaattat tcaataacct gaactctctt gtcatttaac atatagatat caatgcagta
      541 aacaagt
//
LOCUS       KCPA01000397             424 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 43308tic ultra-conserved element locus
            uce-3607, sequence.
ACCESSION   KCPA01000397
VERSION     KCPA01000397.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 424)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 424)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43308tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>424
                     /note="ultra-conserved element locus uce-3607"
BASE COUNT          136 a           68 c           97 g          123 t
ORIGIN      
        1 gctggaaaac atgaacagca atgaaactga gaagacacta aaagaaattc ggggcaaagt
       61 gccagacgcc cagacggaag cagaatgtgg accaaaaagc ttgcgacaat tgggtaatta
      121 tggtttatga atttcagctt taatctgtag ttcagtgagt cctgattaaa tatctgttaa
      181 acacaattaa agtttgtttt tgtatttcac cgtcttgatc agaataatta gagactgcgt
      241 gtttcatgtc aaaagtagca agaggaattt tagtgaatga acatcgtttt taaaagccat
      301 ttgtagcacc agctgttggc attattttat attttagtgt tatcagcata aagatgggtc
      361 ctctcaatgc tgaatgcttt ccagcggggc taagattccg ggaaaggcgt gatacagtcg
      421 gaac
//
LOCUS       KCPA01000398             582 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 43419tic ultra-conserved element locus
            uce-6750, sequence.
ACCESSION   KCPA01000398
VERSION     KCPA01000398.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 582)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 582)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43419tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>582
                     /note="ultra-conserved element locus uce-6750"
BASE COUNT          187 a          124 c          100 g          171 t
ORIGIN      
        1 tgcaagggaa gatggatcat gggaattgtg taaatgcatt caagacagct tcctttcccc
       61 ctattttata tagtcacaac atatttccgg actccagact agcagggctc tttatccagt
      121 taaccttccc aaggctgatg cctgaagtat ctaagatcac tttcaaatgc cctttctaac
      181 aagacccgag caagaggcca ctaattttca ctgaacaaaa agccactgga gagagatccg
      241 tttgtcaata tcaactggtc cagcaatttc ccatcttcag acacatcagc ctatctaagc
      301 tggcagatgt ttagacaaga ttttataaat tgttcaatat cagaccataa tgaaccccaa
      361 ctgaccattc caaagcagct aaaagcattc aggatctccc ctgctgggat ctaataatgc
      421 tctcacgctg gaacattatt aatcatggaa taaaatagat gagcctcttg aaaaataagt
      481 gtatgattga ttaaagggca atctaagaag ctattattct tgttttatta ccgtaagtta
      541 tattcactca atttatcttt tggggaaaat aaatgattgt tc
//
LOCUS       KCPA01000399             814 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 43529tic ultra-conserved element locus
            uce-1980, sequence.
ACCESSION   KCPA01000399
VERSION     KCPA01000399.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 814)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 814)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..814
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43529tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>814
                     /note="ultra-conserved element locus uce-1980"
BASE COUNT          249 a          141 c          167 g          257 t
ORIGIN      
        1 ttacagacat tggattttcc ctatgactgt cttttgggaa tagaacagca ttaagcagtg
       61 aagcaactct ggagatttat ttaaatagct aaagagagtt ccttgttggc ttgttgcatg
      121 aactgggtgc taaaacgtct ctcaccacat aatgattatg aagtcatacc tacaataaat
      181 aagttttagg tcagactcag cagagaccat actaaaactt gtttccttgc ttttaatgtt
      241 tgaaaggtag tagtgcagca tgtgtgtggt cttttttgcg gacgtgatct gcatttaatc
      301 tgggaaaatt aattccctaa gctgctggca ggcagcatgt acttgttaat tattcaggtg
      361 gatgacaaat gcagagcaga ggttctcgca aagacaaagt ttgtatgatg catgtttagt
      421 aactgatagg cttgacattc tgtggtgtct tactcagtgc taatcctaat aagctgcctg
      481 atgagatgaa cgcctatcct cctgtccttt agagagagaa aacagatttg aaagaacttc
      541 attatagcaa taaatcccat actttctgtt attcccagtg aaaagagatc ttgtccagat
      601 gaataacaca cacacagagt cagaatacta gtgtaataca gagtattgaa atgaatattg
      661 tgaatgcctc cactctaaaa gcagctgcag tttaacttta ttgattggcc aaatttatgc
      721 tggttaatgc tcttcaaaat ctttggcatt gttctacaag taatacgatc ctgtggatgt
      781 atgatttcac aaagatttac aagttgccag ggaa
//
LOCUS       KCPA01000400             454 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 43637tic ultra-conserved element locus
            uce-3674, sequence.
ACCESSION   KCPA01000400
VERSION     KCPA01000400.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 454)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 454)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43637tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>454
                     /note="ultra-conserved element locus uce-3674"
BASE COUNT          161 a           70 c           70 g          153 t
ORIGIN      
        1 gttcatcacc gccgtttaag tgaacttaat aaaattattt ttctaaactg ttttagatgc
       61 catatctata atccataaaa tttattgtac ctttatgtag aattatactg gagttgaata
      121 tataaatcaa tttataaggt ctaatgacat acaaacgctt aaaaactaaa ggcgatgtag
      181 taaattcaaa ttaccattac aaatgtaagc tttgtagtca gtgtgtgacc cgctaaggat
      241 tatatttaac tcccctgaga gtggtttatc ataaaacttt atacttttat tacagtgaat
      301 tattaactcc tccatgatgt gagtcattcc atgctctgac tatagctttt ttaatgacac
      361 tataatagac atcttgctaa tagcagtagg attgctacct ctgaggttag aaagaaaaga
      421 tacaaatacg tgaaaaataa ggacctgtaa gaag
//
LOCUS       KCPA01000401             540 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 43745tic ultra-conserved element locus
            uce-46, sequence.
ACCESSION   KCPA01000401
VERSION     KCPA01000401.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 540)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 540)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43745tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>540
                     /note="ultra-conserved element locus uce-46"
BASE COUNT          168 a          103 c           92 g          177 t
ORIGIN      
        1 atggaggcct gtgtctctgg acagaccaaa tactctgttg ctgatgcgat tcacagtttc
       61 gcctctctga acagacgttt ccctgtagaa gatgaagaga gaaaaaaagg aaaaaacgat
      121 gcagactctg attcagagag gtgatttctg tatatcctta ctttctgaga ttatatatcc
      181 atacatacac acgcacatgc ttcacttttt tgttgatgta atactaagat aatgaaaaaa
      241 ttaattgact gagattttat tgagctgtga cagctcatca tagaagtctt cacacacacc
      301 tccacactga attaatgaat gcagtagaaa ttcaattatc tgcattctga ttatgtgaat
      361 ttcatttagt cagacttgaa ttattcgcgt ttaaattatc ttgctaaaaa aatatccaac
      421 tgcactccaa atggctaatt aaaagtccaa atttcctgtc tctctttgtg actggagata
      481 attaaagttc tcctctgtta ctcaggcttt gagtgtgttg tgaaaaccaa tttcctcctt
//
LOCUS       KCPA01000402             675 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 43856tic ultra-conserved element locus
            uce-3554, sequence.
ACCESSION   KCPA01000402
VERSION     KCPA01000402.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 675)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 675)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..675
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43856tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>675
                     /note="ultra-conserved element locus uce-3554"
BASE COUNT          236 a          141 c          117 g          181 t
ORIGIN      
        1 ctgcactgct ctttgttatc tctagttgaa agacagtaca gataaagaaa cctgccatat
       61 gaaattttaa gactcatccc aggtggccat aaaaataaca gaatttcttt agagaccaag
      121 cctattacaa ggttagaatt cccatttaac atttcccaaa ttaaaagtcc ttccaataat
      181 aacagaaatt taaatctaaa agcctgcatt agtgagtgct agctccttcc aactgtttgt
      241 tcagaggctc tccaacaagc atacagcaca ctgtaagaat tcaatttgga aaccatcatc
      301 taaagcacag aggagaacag gaaagtcata ttgctataat gcttagatta tcaatcatct
      361 tgacagttta ttggctttat caccacacat accattaaaa tgatgtctgg cctagaatgt
      421 caggaggcaa acattaaaca gaccaggatt aaaaagcaga tcccaaacag cactccagta
      481 aagtttccct tccactctga aattagttag agctgactaa gtaactggca ctagactttg
      541 aagaaatata cagcctaaaa ggcgcagagt caacacagac ttgacgagct gataggtaat
      601 gtcatgttat ggcaactcta aagctcctgc cgttgattta tcacgtactg tgtgcaacag
      661 aatgattgct aatgg
//
LOCUS       KCPA01000403             529 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 43964tic ultra-conserved element locus
            uce-6732, sequence.
ACCESSION   KCPA01000403
VERSION     KCPA01000403.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 529)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 529)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43964tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>529
                     /note="ultra-conserved element locus uce-6732"
BASE COUNT          147 a          129 c           96 g          157 t
ORIGIN      
        1 catatgttta cgggaaatgg aacatcagac tccttacctt cagagcgctt aatctctagt
       61 ctaagcactt gaacctgatg ataggcatat atataaaact ttaagtattt atctctcgca
      121 agtttcctcc tactgggaag gcttccaagt cccctctagc ttcatggatt ttctcagctc
      181 ttgtgtttgc tccttctccg caccttcccc agtgcagaga ggcacatctg tctgttttct
      241 gccttatcaa gcagacatct acatctgtga ggacttcctc agctaaaaac ctgtatctga
      301 ttgtggtaat aaagcactac ttcctcagtt caaaacatac atcagacagg accaattact
      361 tcaaatgact catagcaacc aaagcaacgc tcgcggagcc tttgaacttc caccgcttca
      421 aaggtgtact aaaacgtggt tatgaggcga ttgtctaaaa ttgccaaatt accaggttcc
      481 aagctttgac tttgttattc tgagcgatga gacaaaggaa gttagttca
//
LOCUS       KCPA01000404             801 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 44077tic ultra-conserved element locus
            uce-4895, sequence.
ACCESSION   KCPA01000404
VERSION     KCPA01000404.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 801)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 801)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..801
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44077tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>801
                     /note="ultra-conserved element locus uce-4895"
BASE COUNT          144 a          212 c          221 g          224 t
ORIGIN      
        1 gcccccctct tttcccagtg cccactctcc agagagcccg ttgtgcttgc ccagcttcag
       61 ccctgctggg ccgcagtgct gagcgccctc ggccacgccc ttggtggccg tggccacggt
      121 gcccagctga gtgaccgccc tgccaccaac agccggagcc ttctcgccgt tgactcctgc
      181 tgcatttttc cctttcctgg tggatttggg ggcctgcctg gagtttttgc cttgcggctt
      241 atcggttcct ttgttggttt tgggtgattt tttccgggtg gctttctggg aagagctttg
      301 gtttgtaccc acattcttgc tggatgaact tttcctcttc gattttgaca ctttgctatt
      361 ggtgctaatt tgaccagatg gctcattaaa tgttgacaag catggactct tttcgagaag
      421 gctgacagaa tcttcatcgt tgaacatatg gaactggaac tggtgattat ttaaagcaaa
      481 cccattatct gcctgatcct cggtctgcag gaccccacag ttccacttga ccttctcgga
      541 gctgttgagg gaggcctggg ggctctcctg aaagcccttc agggtgccca gaggcttggc
      601 atcggagcca gctatctgcg gggacaggtt gggagtgtct ggaggggaca tctccgaaag
      661 cgacgactgg cggaacctat caggcgtgaa gttggaaatg tctaaaaggt ccgtggactc
      721 cttcaaaggg gtgatttcat ctatgctctg ctggatcact agcttgggac tgcagtgggc
      781 caagaaatca tcattaatat c
//
LOCUS       KCPA01000405             839 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 44188tic ultra-conserved element locus
            uce-6187, sequence.
ACCESSION   KCPA01000405
VERSION     KCPA01000405.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 839)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 839)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..839
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44188tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>839
                     /note="ultra-conserved element locus uce-6187"
BASE COUNT          269 a          184 c          170 g          216 t
ORIGIN      
        1 acagacagga cgggagcaac agccaccaca tgattaacac ggtctcctac ctgcttgaac
       61 ttgacccggc agtttattgc aacaaagtca gcaaagaagc actcagttca agggttactt
      121 aaaggcaagg gcttaccagg ttccccaaca atacacgtca tctgaaagct accacaaagg
      181 acctacaacg ctgtctggct gaacttcaca atgccgagct gaggcctggg gtttttgttg
      241 tgtttgtttc tattcagtga tcctccaatg ctagcctaga aatgacagta ggtggaaacg
      301 ctatctttca ttacacaaag tataaatagt gtaatctatc agcactgtca atcaagatga
      361 ttgattacag gctgtcatag agaagagtga catattagaa aagttttgtt aacaatgcct
      421 attgctagtc agcctgccac agaagctggt gattaatgtg ttgtcagcct gtaatcccac
      481 acccctggct aatgaggcag gaatttatca tctttacaga gtggcagatg tcagaaggaa
      541 aggaatccaa gtgctggaaa caatatactt tttcttacca cgcctgacaa gtctgacagg
      601 cctaaaaaac cacaaagaag ctttgtgtaa gcacaaactt aaaatgaaga actttcattt
      661 ggcatctttg ctttaaatag tgctgcaaat cagcctctat ccctcaaaaa ggccacaata
      721 aaaagctcta tgaactctga acctatcctt gacaactagg aaatctcagg aaaggtttcc
      781 atgggagaca gagagctttc tccatgagag aattagcaag taacttttaa ctttacctg
//
LOCUS       KCPA01000406             738 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 44300tic ultra-conserved element locus
            uce-7515, sequence.
ACCESSION   KCPA01000406
VERSION     KCPA01000406.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 738)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 738)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..738
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44300tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>738
                     /note="ultra-conserved element locus uce-7515"
BASE COUNT          204 a          143 c          159 g          232 t
ORIGIN      
        1 ctcataagcc agcctaggca taatgtgagg acctgctttg gtaactaaaa aaaagcttag
       61 ctgcttccat catgtaatta ctgcaataga ataataagtt agctgaaatg atgctttatg
      121 cctagtcttc agcattccat gggggggggc ttttatttat ccctcatggg ctgcaagaat
      181 gaagatgggt atgatttttg caagggtgaa ataggttgtc tgtcaattgg gtttaggcga
      241 cagtctgtct gcaggccgta agatgatctg catagtgcca gaggaaagca ggcagaattc
      301 ctggcttgca agctcagata ttgatctacc ttagccacct aaacaatgcc tcacctgttt
      361 gccttgtcca taccttattt tacgcagtct aatgcttgtt ttgtttgact tttcttttat
      421 ttctgtggat ctgagctttg atacactttg gggagtacat aaacacggtg ttgtacttga
      481 acatcaccat cctgcagagt aatctagtgg ctctggacca cccctccctg catgagaaca
      541 gcagtgttat tgaaaattat gagtgagcaa ctaagtaagt aggccacata cacaagcgtt
      601 tgatctatca gactagtgtc caatgacatt gaatgtgaga tgctactaat tactgcacta
      661 tgtactccca gttaaaattt cttaaattga agcttctaaa agggtctatt tttataattc
      721 agctgatggt tacaagat
//
LOCUS       KCPA01000407             700 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 44406tic ultra-conserved element locus
            uce-4171, sequence.
ACCESSION   KCPA01000407
VERSION     KCPA01000407.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 700)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 700)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..700
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44406tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>700
                     /note="ultra-conserved element locus uce-4171"
BASE COUNT          198 a          141 c          149 g          212 t
ORIGIN      
        1 gatgctgcag gtttaattaa gtacgtggca gttaatcagc cactgaaaac aggggccccc
       61 gctggggaat tacctgagcg aaaacagacc aaacatgaag gggctccctt gaaactctag
      121 tacttgtgct tctatggtga aatggaaaga aagttatcaa ataaaatctg tttgcttgtg
      181 gctgtactgt gacagctttg ttagtcctaa cagatgacaa ggattattca atcaatatag
      241 atttaccttg agagttttgc tgttttcagg cacctccagg aaaatgacag ccattaaata
      301 tgtacaaagg ccagtccagg gcctgtggcc tctagcttta agctgctgcc ttttctgagt
      361 tatgtcagga tcaatttttt ctaatagata tcacttatcc tacatgataa tcaggctatc
      421 atagtccatt gattacatga catcctgatt taggtctggt ccagaagata agaaacacaa
      481 ggaaatctct tgcttgtatt gtcagggaaa taaattcctc tttttcccct gaagttattt
      541 cctgtgtgca gagaccaagt gagctgttga gcagttaccc tccttcatac catcctcact
      601 cttttgtgga attgcgaacc agagctgaaa acttgaatcc agcattttgt catctgaatt
      661 tggaaaggta gttagcactg attgctgttc cagtacgagg
//
LOCUS       KCPA01000408             665 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 44519tic ultra-conserved element locus
            uce-2140, sequence.
ACCESSION   KCPA01000408
VERSION     KCPA01000408.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 665)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 665)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..665
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44519tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>665
                     /note="ultra-conserved element locus uce-2140"
BASE COUNT          220 a          137 c          105 g          203 t
ORIGIN      
        1 ccacaacttt acaaagttgg tactgctgct aatcctggca tagcttaaag gtctttgttt
       61 ctgtaaattc aattgagtgt tcctatttct aagtctagca agaggttcta attattgtta
      121 gaagcctaat tagcatttag tattacatta caacaactgc agcaaaattg tacccgttct
      181 ccaataaaca gtattcacag tgtgcaatca agctgctgta cgatgcaatg agaattaata
      241 gcactgcacg acaatggtaa atcctacaac tcccgctgtg tgtgtttaat aatttttcac
      301 tccttccaga ttgttcccat caagcgcaat tcccaagatc ctaatcagct ttcctcccca
      361 tcaatactac atagagatct gagcactgaa aattatctgc aatttcaaaa agtgctttgt
      421 tgcattatta ggccactgac ctaagaggta atgggtaaat agtttctgaa aaatgtccaa
      481 agcacaacat aaattaaaga ttatagtctt gcctgctgtt ctcaccagag ctgtaactgc
      541 aaagttacat aaaatcctta actacagtgt tatatacaaa aattagtaca aagatgacaa
      601 ggtttatatt taaataagtc cctttgccat acaaataata cgaagttgga gagccactag
      661 cacct
//
LOCUS       KCPA01000409             688 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 44628tic ultra-conserved element locus
            uce-1566, sequence.
ACCESSION   KCPA01000409
VERSION     KCPA01000409.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 688)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 688)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..688
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44628tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>688
                     /note="ultra-conserved element locus uce-1566"
BASE COUNT          202 a          128 c          112 g          246 t
ORIGIN      
        1 acaagaaaat acagtcattt aagatataca tggtatttta agttaagagg tacaacgcct
       61 tttccacatc cttgtttaca gaatctgatg aaaatttggg taaaatcatc tgtatttttc
      121 tcacatagtt aaatgattac tcataaatta acatccttgt tattaatagc tacatcatat
      181 agccattttt ggagggggga acattacact tttctctatt tatatcccat gtgtctgtcc
      241 tctgtcattc tgtttctctt taatcttgtt tgagtatacg gctcactcgt ccttatttta
      301 ttgactcaat cacaggcaca ctgtcacttt ttataaaacg gtcactgcag aaccacatca
      361 agcaaattct tgattctgca gtcagtaatt tagtgccttt atggaattgc aatttcaggg
      421 ctcactgctt gtttttctaa aatgtacttt aggaattagt tactccagcc acaaatcagt
      481 tgaatttatg cacagttgta atacagttta tggcctcatg gtacattgct tcaaaaacag
      541 cagatgtgaa attatgataa atataatgag tgtttttttg cctgatctac tgaagtagag
      601 aaggatctgg agcgtgttta cctatcccat acagtacatt taatgtctta gtcaggactc
      661 ctgacaaagg ctgattaatg tcctcatc
//
LOCUS       KCPA01000410             486 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 44737tic ultra-conserved element locus
            uce-4004, sequence.
ACCESSION   KCPA01000410
VERSION     KCPA01000410.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 486)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 486)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44737tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>486
                     /note="ultra-conserved element locus uce-4004"
BASE COUNT          135 a           68 c           92 g          191 t
ORIGIN      
        1 ttaatacatt ccgtcaggga cgtaaatttc tccttaggaa gtgtgtcttt tcggttttgt
       61 tcaaatgaag ttgcttttgc agcaccaaag acttaatcat ccattttcaa aaggtagcta
      121 catagacctc aagtatactg tagtgtagag atacagaagg tattaagctg aggctgtgtt
      181 ttagcttatg ggcaagtaat aaattgtatc atttatcttg aatgtatcat agataagctg
      241 ctatataatg attgccactt cagatagctg tgaaattagg tgattaacta gttctttctt
      301 agccttctaa tttctgtaca agtctaatta catgaaatag aagatgggct tttttttttt
      361 ttattttgtt ttcatgtttg aagtgtcgta actactatac tgtaaatgat ggaagatgat
      421 tgcatatgtt tttttggggt gtgttatttg catcagtatt ttatctccat taactttgag
      481 ctcatc
//
LOCUS       KCPA01000411             622 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 44842tic ultra-conserved element locus
            uce-23, sequence.
ACCESSION   KCPA01000411
VERSION     KCPA01000411.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 622)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 622)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44842tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>622
                     /note="ultra-conserved element locus uce-23"
BASE COUNT          212 a          111 c          100 g          199 t
ORIGIN      
        1 atacagatat atagaaataa aattagcatt agtctttcca cataaaagtt cacacgacac
       61 aaaacatttt gtgttgagtt ccctaaatca atgtttaaag ttaaaattac tgcactgaac
      121 gggttctttg aaaagcaacc cattgatttt aatctgcttg aagcaatcaa ttactccctg
      181 tcctctttat tccaaactgt aatgaaaact aaactgcgtt gtcttgaaaa ctaaatgtga
      241 agatgatcat aaacagaatt taaagtccat ggattattca tatctaccca tttagatttg
      301 ccatttccat tatgagtaca tttgccatga gcatttaatg gacatctaaa agggaattca
      361 ttaaaggagg agctgttggc agcacttatg ggcttcagac tgctttatgt ttgcctttaa
      421 tagctcacta ttataaaagt gatatactgt gttcatccca ttagtagttt gcagaaaggt
      481 ctgtaagaca taacaaatcc tttagagtat tgtcagaatc aaaactaaat cacaggcaag
      541 tggcatcccc aacaaggtac cgttttaggt catctaaatt ttgatgatct tagtcaacta
      601 agaatttaat ggccctatag ac
//
LOCUS       KCPA01000412             574 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 45054tic ultra-conserved element locus
            uce-3517, sequence.
ACCESSION   KCPA01000412
VERSION     KCPA01000412.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 574)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 574)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..574
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45054tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>574
                     /note="ultra-conserved element locus uce-3517"
BASE COUNT          168 a          113 c          107 g          186 t
ORIGIN      
        1 gaagacattt cttcatattc tcagttaatt cagtctaaaa gtgtcacact tattcaacag
       61 cagttaaaat agtctgtgat gagagcatga caatttccag ctaaactaga ggataattag
      121 aaatgccccg tagcaggcaa gtcagtgctt caatttattt gctgtttatt accaagtccc
      181 tgccccttgg gtgtaatgac tgtaaagcag cacctgcagc ttcccagtgt ttgatttagt
      241 gctgtaaatg gtgctcagag agtagattaa gctggaatgt gatcaaacct tatttgcaat
      301 ccgattatac aaactgttcc ttgcactgac cagattgaag taatttccct atagaaacgt
      361 tacactcact ttggtgtaaa aatgattaac atgtgctgac tgtaggtcag cctttcactt
      421 tcagtgtaat tctttatcag gcaggatgcc catctttttc ttgtgtttgc cacatttgtg
      481 taccatgcag tatttaacca atggatataa tcaacctccc aggtcttctt gatgaatgat
      541 tgtaataaat aagcactcta gcataagcag atta
//
LOCUS       KCPA01000413             467 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 45159tic ultra-conserved element locus
            uce-4835, sequence.
ACCESSION   KCPA01000413
VERSION     KCPA01000413.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 467)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 467)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45159tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>467
                     /note="ultra-conserved element locus uce-4835"
BASE COUNT          169 a           79 c           81 g          138 t
ORIGIN      
        1 actaacattt caggtcatca gataactcaa taaaatacaa tcttaaaaga actaagaaag
       61 catgaataaa aatatataca acaatttctt gtgtagtcaa agtatcagca ttttccatat
      121 agaacatcca atattttgct gcattttaat taaggtgtct aaacattatc acaaagaact
      181 gcaaattggt cagagcacgc agtaaggaaa attaagctct aaaggctttt tatcaccata
      241 tttcaggaac caagggtgta aaatgttcta atttgggata tattaaaagc cataaaaggt
      301 ctttcaaaaa gattaatggt actttgcttg gatttaagat aagggcttta gctggttgga
      361 aaagcagggc cctggctaga cccttgaggc attcatcttt acagccactt ggaagatttg
      421 taaaagcgtc tgcataacct caagcaaacg cactgcgaca ttttttt
//
LOCUS       KCPA01000414             741 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 45271tic ultra-conserved element locus
            uce-893, sequence.
ACCESSION   KCPA01000414
VERSION     KCPA01000414.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 741)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 741)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..741
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45271tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>741
                     /note="ultra-conserved element locus uce-893"
BASE COUNT          234 a          121 c          127 g          259 t
ORIGIN      
        1 tgttattttc tctgctcaag gatttttaca tcttgaaatc aaagtagatg tttctaacat
       61 ctctcatttt aaccagaaat gtttgcttct atcatgttgt tagtcttggt cacttgtact
      121 taattaagat ttcagatgta gagttgccaa tcaacatact aaatgtacct ctctcctctg
      181 ttttcacaag caggcatcag gagattcaac acagtagttg atagctggta tgtgatatct
      241 gtctcctggt ttatagcctg gtacaataat gtcattgccc catgtggcaa atggtgtaag
      301 ctattgtaaa actgtttgtc tatgtgatta agacattgca gcagtgtgca gcaccagcca
      361 attacttttt ttaatttaat tatagcagaa aaaagagaat agcataatag aaattcttgt
      421 catagggaat atgtaaaatg taaattgaag agccatgaaa atttcatgca ttggcaggct
      481 gatttgttct tattttcaac ttgttatgaa gactgagttc tttaaatgca ataaaacaag
      541 acatagcagt gtttagtaat tacttagttc tacatcaaaa taattatata cagtatgtgt
      601 ttgcaatcca ctctgctgcc tatgaatgta aaaatgaaca cttcagggcc catatcaatt
      661 ttgtctttta gacagtgtaa ataaagctga atcttcaact ttcaaattaa aactgataac
      721 cttgggcaat cagggctttt a
//
LOCUS       KCPA01000415             673 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 45384tic ultra-conserved element locus
            uce-6621, sequence.
ACCESSION   KCPA01000415
VERSION     KCPA01000415.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 673)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 673)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..673
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45384tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>673
                     /note="ultra-conserved element locus uce-6621"
BASE COUNT          217 a          137 c          102 g          217 t
ORIGIN      
        1 tttgtacctg catatcttgt ggaaaacctg aagcataaag tttgagaaaa caggtttccc
       61 aagaccacaa aaaaaaatca tataaattcc tctgagtact aacagctgtg cccacttgcc
      121 aatgcatttg aggttataca caaagagaag caaaaccatg ctctttcact ttaccacaat
      181 tttagagttt agctttaaat gatttctgag gaaaggcttc ctgcagactt ttcacttaag
      241 tagttgtaac tacaactgca aaacactgtt gactggtgga ctccagagac ttgttcatta
      301 cctgtcatta aatgttttaa agtttgcata attgatccag ccaataagtc atcattgatt
      361 tataggggtc tgtgctgaag agttgctcat taaaaattca taacgctggt atgtgtcttt
      421 acaatccatt agctgtttac gtacccacag tcctaaaatt gattgacctt ggactgagat
      481 tctcatggac tctgctcaga aaaaaccctt ttatttccat aattttacac aagtccgcag
      541 tatagaaaag caatacttca gttttctccc ttgacagcta tactttgatt tttcctctcc
      601 atcaaaactg aaactttact tgaaataatg aataaataaa gcatactcca taaacagctt
      661 tccactatta ttt
//
LOCUS       KCPA01000416             445 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 45606tic ultra-conserved element locus
            uce-7882, sequence.
ACCESSION   KCPA01000416
VERSION     KCPA01000416.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 445)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 445)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45606tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>445
                     /note="ultra-conserved element locus uce-7882"
BASE COUNT          121 a          130 c           86 g          108 t
ORIGIN      
        1 gagccggcct ttgttcccag tgcggctccc acagagcccg gtctggattc gtcccctatc
       61 actcagttaa tttgtacaga gctgtctgtc aagtcacatc gccccgccgc aatctgaaac
      121 accctccgaa cagctgccac tatcaattac tctccaggca gccctgacta tcaggaagag
      181 aactggagcg agcacttgcc agttttaata aactgtgttg cccaagtcat ttaacctgct
      241 agattgctgt atgctggggc tgtaacaagc cttcagcttt tcaacctaga agaaaacagc
      301 agtggcaaaa agctgccagc ttggtcctca gaattaactt ccaagggagt cttcccctcc
      361 ctccccaaga acccaagttt aaaaagtgaa atatcttcaa gtcatttcca taacatcacg
      421 acacagaaag cagctctcat ttcta
//
LOCUS       KCPA01000417             826 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 45719tic ultra-conserved element locus
            uce-7903, sequence.
ACCESSION   KCPA01000417
VERSION     KCPA01000417.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 826)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 826)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..826
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45719tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>826
                     /note="ultra-conserved element locus uce-7903"
BASE COUNT          191 a          215 c          208 g          212 t
ORIGIN      
        1 aaaaatgaac aaatgcagcc aaatgacaga atgtaaacaa cactccctga actaccaggg
       61 acatcaggct caaacgccct gcgtgcttcc ttcccggagc cttgtctccc gctaagacct
      121 caaagggtta agcctgcaaa ttgccttgct gtgcttctgg gacagcatga aggatggctg
      181 ccattgccac ggtcagatat gacagcgcca atttgatgtg ctgccatcaa gggccttcta
      241 agagccgagc gccctgatgg ttttgtgatg cgaacagtcg catcacaaaa tggttttcct
      301 ctcccgctgc ctctgcttcc atctgctgct gggccgaggc acagccggct gcctgcctgt
      361 cacagcatgg attaaaatta gctggggagg aggcactcag ttgtgctaat tacattttaa
      421 tcattggaaa tgtgttggca aatcaagcct tgattgccat ctcggagcct gtctcctcca
      481 gcagagcgga ggggctgtct gcattagctg ggccctgctg ggcccagttc tctcacagaa
      541 gatggaatat ggtgcctgct ggcccaccac tgagactgct ttggcacatt attaaaaagc
      601 cacaaggctt gtttcaaatc atcactgtgt gagctccgct cattctcaca tccctgggta
      661 ttgcagccac ttggtacttt taactatatc tttagtttac cttgtgggct caaaaacaat
      721 tttgcatgcg tgggtggagg aagccagagc tcttctgcag ctcgtggggt tgggaacaga
      781 gccggttgtc aaaacgcctt tcttgtcagc tgtaaggctg cactga
//
LOCUS       KCPA01000418             505 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 45822tic ultra-conserved element locus
            uce-6534, sequence.
ACCESSION   KCPA01000418
VERSION     KCPA01000418.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 505)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 505)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45822tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>505
                     /note="ultra-conserved element locus uce-6534"
BASE COUNT          166 a           77 c          106 g          156 t
ORIGIN      
        1 aaggtgtaag tagtgcacat atacttacag tttgtatatg tacatgtaat atatcaagta
       61 tttaatggtt aatacaagga aactgatgtc attccatgag gaacaatggt ggcactcagc
      121 catttctttc ctgaatagct gctgtgtttt aaaaataaaa aatcagggag ctgctgtagc
      181 aaagtctgta gcattcacag catgacaaac aaattagaaa acagcagatg cagcacaaat
      241 taagatgtat ttagcacagc agcccatcag atgtgtgaaa gtcttttgta tatcagcttt
      301 gcaaggttga tgtattgcac tttagacagc tgataatgaa cccttctagc aattagaggt
      361 ggaaatactg aggatttgaa attgtgctgt tcccagtggg ggaaaaccct tagtgagaaa
      421 tttactgctt tgtgtgtgtg cattgagcaa aacaaagcaa atgtttcagt ttatgcacat
      481 gtagattttg aatttctcat ttata
//
LOCUS       KCPA01000419             672 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 45934tic ultra-conserved element locus
            uce-2335, sequence.
ACCESSION   KCPA01000419
VERSION     KCPA01000419.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 672)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 672)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45934tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>672
                     /note="ultra-conserved element locus uce-2335"
BASE COUNT          201 a          141 c          113 g          217 t
ORIGIN      
        1 tcataccatg tctgacccag atgtacggag tgagctcagc agattatttg tcaaacaaat
       61 tctggaacct aatatttggg tcttttaatt taattggtat gcaaatcaaa aaaagacagc
      121 atttgtgttt gatacagttg tcacttctaa ttctggtaac attcattatc atgcttacag
      181 atcttacacc caacatctgc caatactacc taaaccacag gaagttgaca aacctgtgca
      241 aacttctccc tcttgctttt tgttatctgt tccatgcaca ctaattttgt gcatctgagg
      301 cctctgctcg ccagaattat gcctgcttcc taacacctct gcctccagag ctttggattt
      361 gaaattgaat agacacagag ccaatttatc ataggatgac atgtgtcatg ttcatggtat
      421 aaccagaggg acctactgtg tgcactgtat ttatcctttt gttgtcaaca cggacaaaga
      481 caataccagc aatagacaga tgttaaattt ttaaaacaca atactactta actgttgaga
      541 attggaattt ttaaatgtag tctcattttg tttaacacca gatttccttt gtcagataat
      601 catctgtcat tcgggcatgt agcacgttaa aatatgtgag caccaaatac cagtgtatta
      661 gcagcaagtc ct
//
LOCUS       KCPA01000420             451 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 46043tic ultra-conserved element locus
            uce-7340, sequence.
ACCESSION   KCPA01000420
VERSION     KCPA01000420.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 451)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 451)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46043tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>451
                     /note="ultra-conserved element locus uce-7340"
BASE COUNT          126 a          103 c          101 g          121 t
ORIGIN      
        1 aaaggcccca aacctgcagt tttatgctgt gtcagggacc ccattctgtt ttttgcacca
       61 gcaccacctg gctctgtgtg tctgtgtaga aaacacacag attctcttgc ccaccacttc
      121 caaagcagcc catggaatgg aatcctgtgc ttttagaaga tgacctacag cagtgggagc
      181 agtgccagca ttacctgtgt ttctagcatg cattaaccgt ggagagtttt gtaaggcctt
      241 atcaacatca tctgaagtca aatgtggaag aggagctaca aaacaaaaca aaaagcaaca
      301 ccaaaatgtt cgtgaattat ctccctgaca ggattgcctg agtttggagg gaggttaggg
      361 cattcatttc tccaatcaca aaatttagtg tgcgtgtgga ggagactgca ccgcactggt
      421 gttgcaatgc tctctaaaaa ttttaacttc t
//
LOCUS       KCPA01000421             825 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 46155tic ultra-conserved element locus
            uce-671, sequence.
ACCESSION   KCPA01000421
VERSION     KCPA01000421.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 825)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 825)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..825
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46155tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>825
                     /note="ultra-conserved element locus uce-671"
BASE COUNT          210 a          200 c          198 g          217 t
ORIGIN      
        1 cactggagct cattggtgcc ccagcagcca acaaagaact gactgagagt ctgttactcg
       61 ctgaagagct taggggtcgt tgggaagctg cttctttatt agtcagttca gagactgaac
      121 tcacatcagg agagcttacg ctaacaattc ccatggatat agcactggac tccccaggag
      181 cacgtattga gttatcagga cctaacttcc tctctgcgtt ttcatttccc atgtccgctg
      241 ttaaggtgct ggtgcttgca ctggaagatg accctatgtc agcctgaggc acactgtcag
      301 cagaagacag aacaacaatt ggttcatgga cgtcagtgcc tgaaactata ttttgttcca
      361 acacactttc tgatctccgc tccattttgg tcgaacccaa gctgatgtcg ctgctacttg
      421 ccacgctaca cacagaactg ctgcttcctt ttctacttga ggagcctgca gcagcagtcg
      481 tcttgtctgg acagttgttt ttcaccaagc tgctccatga ctgcgttgtg cctgaaacag
      541 tggatgaaac aggtttgggt gatgccgctg aatcagggtc gtaccctggt gcaagcttga
      601 ggtcaaactt tccttctgcg cccatacggt aagagttaga gccaccagca tcccaggtga
      661 catcaatcca gcctggaaag ggacaggagt ttgtgagatc cagcagaaag cagacaggag
      721 gcgtgtcaga cagtagctcc acaatgtggg atcagcttct catgtctgaa tcaatatcac
      781 taagtaaagg aagtgtttaa atctaaacaa tttagtattt tgtaa
//
LOCUS       KCPA01000422             742 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 46265tic ultra-conserved element locus
            uce-5196, sequence.
ACCESSION   KCPA01000422
VERSION     KCPA01000422.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 742)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 742)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..742
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46265tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>742
                     /note="ultra-conserved element locus uce-5196"
BASE COUNT          255 a          133 c          134 g          220 t
ORIGIN      
        1 aatttgtctt ttagaatgac aagttatatt gagtgatgag tggttgaatg agcaaggtga
       61 attgcaggct tttccattag agattacaga taaatgaaga cacaagtgaa atgagagtcc
      121 aacatcaagc acattttttg aagactaaag gggatgagtg tttctaaaaa aagaatgact
      181 aggagtgaag aaaagaagat atattgtgag tacagtcttt cctcttagag cattgtgcac
      241 atcattttac tcttttttca caagcacatt gctgagtaac cttttatgat ctaatgaaag
      301 aagtccatac ctttcctgat ccctccatca gtagcacacg tgtaatcacc tgttgtcagt
      361 aggaaacatg ttccccctct tctgtttttg tctcttgtac tagaacgtct gatgggaggg
      421 agcctttcac caggtgagag tggctgctca cttcctgcac tgtcttcacc tgataacact
      481 ggttaaagca ccatgcccat ttacagacaa taatgaatga ggaaatgaga catcacaaag
      541 agcttacact gaatgccaga tattcccatc actcaaaaag tagatataaa gtaaatcatt
      601 agaagaaaac aagattgtaa ttcatcatta atcagtacaa tagatacacg ttttgttcaa
      661 gaacaaatga tcttacaact ttcctgttct tctaaaattt gcataaaatt agattaaact
      721 aacatgaact aagaaataat ca
//
LOCUS       KCPA01000423             753 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 46377tic ultra-conserved element locus
            uce-2142, sequence.
ACCESSION   KCPA01000423
VERSION     KCPA01000423.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 753)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 753)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..753
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46377tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>753
                     /note="ultra-conserved element locus uce-2142"
BASE COUNT          218 a          139 c          128 g          268 t
ORIGIN      
        1 tgaaggtctc aatagaaaac atttgagtaa taaaaatttg cataattttg ggaaatactt
       61 tgctttcaaa gtaattctct ttttcacctg cttaggactt gaccatgtat ggctttagtt
      121 aagttttgtt gatggcagct catgtttaac caactgtttt taatttacaa attaaacttg
      181 tcagaagtag aaatccttcc cttggaaccc ttccaatatg tcaagaatta attctaatga
      241 aaacggcatt gcctaaatgc aggatggcca gttacttact ttatttacac aaagtccttc
      301 tcagtttctt tgataaaagc agctaaatct ttttcctctt tcatgttttg tcagcacttg
      361 attccttttg tcccctggct atttgcctag ctgtggacaa taaggcagga agaatagaag
      421 cagattgttg gaatggccct caataaacct aattatgaca tgttgactgc actcaccatg
      481 acatattcag gagatccagg cttattcaat tacccttgcc aggtttctct ttcagaccta
      541 aagttatcct ttgactgttt gtatttctga acagtattca tgttcattgt gaaagaaaat
      601 cccctggact ttgaggggtt tctaagttga tgctgttatt gtagctaatt tttattaact
      661 gaatgataac atgataaaga aatagacttt tgttatgtaa taagaacaaa tcagtgtgtg
      721 cttaaagtta cacctttctt tccccccctg cag
//
LOCUS       KCPA01000424             614 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 46489tic ultra-conserved element locus
            uce-3619, sequence.
ACCESSION   KCPA01000424
VERSION     KCPA01000424.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 614)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 614)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..614
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46489tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>614
                     /note="ultra-conserved element locus uce-3619"
BASE COUNT          157 a          128 c          128 g          201 t
ORIGIN      
        1 tctgggtgtg cttctcaatg tcttaacaat gtccacctca gatgcacatt ttcttttcct
       61 tgaatagtgg tcaaatatgc atgcttttct ctttcatcat gtcacaaact tcggttcatg
      121 taacatgatc tatcagttga aattttggga gggcagtcag atcatgtttg ctctccatgt
      181 aaaatgatga gcacccactt ggtcaaatag taggaaaagg cgcctttttc tggcctcagt
      241 ttgaaatcat atcaaatctt cgatggacat tttttgtttc ctaaagaaat acttactggt
      301 tgctgtaggt gaagatgcct caccttcagt ggatgtagtg atgggtttag tatctgtcat
      361 ggtcagggtc acaggtcgca ccgcactgtg atggggagag ggtgccaaaa ctggagtaaa
      421 atggccaggc actttcccta ctacttgacc actgctgtta ggctacaaaa caaaaccaaa
      481 agaacgcctt gtgaaacata cacattgtgt ttaaagaacc taccttttcc acaactgctc
      541 tgtgttttgg ttctaaatag gctatgaatt tctgtgtgat attttaggtc ccttctcaga
      601 ttcttctctc ctgg
//
LOCUS       KCPA01000425             593 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 46597tic ultra-conserved element locus
            uce-3546, sequence.
ACCESSION   KCPA01000425
VERSION     KCPA01000425.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 593)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 593)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..593
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46597tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>593
                     /note="ultra-conserved element locus uce-3546"
BASE COUNT          179 a          118 c           81 g          215 t
ORIGIN      
        1 acttgtacag atcaagtctt cctataacaa acgaaacaca gaaaattata gtcaagttat
       61 cagtataatt ttgcagcttt gaaaattcaa tgttcttagc aattaaactg tacaatgaag
      121 ttgttttgcg cagacttgat tgttaacatg catgaatttt ggaaggttaa gatgcttttt
      181 gtcaaaaatt agtttttgtc caggtaatgt aattgatgaa agttttactc tatacagttt
      241 gaaatgctca ctggtactct acctttccaa gggaaagaca gaaaagaaac catgactatg
      301 attctcaagt gagtacactc ttatttatat atctcatcag gtattctaca gggatgccct
      361 ccgggctgca atatctaatt tctactcctc cctcattttc aaaggtactg gtaaatcctc
      421 actccctatt ccatattatt aattcccttt gctgcctatc taatttgctt tctaccatac
      481 cagtacaaag gatttcatag cagctctgta ataataactt ctccaaccac atgatctttc
      541 ccatcttatt tccataatat tttttaactt tcttatcctt tttgataact tgt
//
LOCUS       KCPA01000426             789 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 46708tic ultra-conserved element locus
            uce-334, sequence.
ACCESSION   KCPA01000426
VERSION     KCPA01000426.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 789)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 789)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..789
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46708tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>789
                     /note="ultra-conserved element locus uce-334"
BASE COUNT          236 a          173 c          159 g          221 t
ORIGIN      
        1 tatgcataaa aaacattaat tacaccgatt agacgcccca gcataaccga gtggcgagca
       61 gaagttgcac gagcacctac acctttaggt accccattgt aaacatgggt tgtctgtcca
      121 caatttatta gtagcagaca tttaactcac attcacttga gcagaattaa gagtgtttac
      181 tttcctcata agagggcagt cagatatgta ccaattttgt ttcagctgtg gagagcaggg
      241 agctgggagc agtgtgggga agggatccag gaaggcctaa tcaatcactg acagattaca
      301 gctaaagcca cttccatacc cattaaagca ggacaaatgc agaattgcaa ctgaacaact
      361 tctagtttta agccaacagt gggacttcct agttatttat caaagtcatt gctggtaagc
      421 agcatgcctc actgctcaat tgtacttcac agcagacaga gctgactgaa gcttcagcca
      481 tgaaagaagt gtttatgccc tcagctgtgg tgctgtcagc cctctggaat ttactgtaaa
      541 tcacacagct tttattgcaa gatttagtag ctgatcctct gtgggctcta ttcactgcaa
      601 gcttgttact atttggatgt tagcctcagt ccataaaggg acttgctaca catcatcaaa
      661 cagcagcgga aaaccaaagg tttcattttt caattttcta aaccctaaac tcctcaacag
      721 tcattgaatt tcattgcaga aagtggaagt ctactttatt atggtactca atttccccaa
      781 tggagttat
//
LOCUS       KCPA01000427             514 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 46815tic ultra-conserved element locus
            uce-3350, sequence.
ACCESSION   KCPA01000427
VERSION     KCPA01000427.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 514)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 514)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46815tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>514
                     /note="ultra-conserved element locus uce-3350"
BASE COUNT          165 a           98 c           91 g          160 t
ORIGIN      
        1 gtgtgcatgg ttgtaatgac atttcctgta tcacatctat caggttacaa gcagctaata
       61 attttcttct actcacagcc gaacataatg gcatacactc ataaatcaac atcaacatgg
      121 aacattgctt agcaaatata aatgtatgtg cattgcagaa tgatcagaga ttacgaaaat
      181 atatcagaag tcaaaagtag ctgctggaga aatgctatgt cttaagttta ttgagattgt
      241 ttggaggatc ctaatgtact gtcactgaaa gaataatttt tcctttacaa tctacttagc
      301 aaagatttat tgatcctttc ccccttcata gagaattact gatccatttt agaaaatcag
      361 attttcacac ctttcacgag aatgtgcaca gcgcagttct ctagggattg ccaaggaagt
      421 tgactttgac atgaaatccc taggtaccgg cacacaacag cctatagtct catcactgat
      481 ttgttgcaca gggtggtaaa atacttttgt acat
//
LOCUS       KCPA01000428             355 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 46917tic ultra-conserved element locus
            uce-6991, sequence.
ACCESSION   KCPA01000428
VERSION     KCPA01000428.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 355)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 355)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46917tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>355
                     /note="ultra-conserved element locus uce-6991"
BASE COUNT          101 a           79 c           80 g           95 t
ORIGIN      
        1 aggaagatac acaagtgtgc caatgtaaat tgctccattt ggagggctaa ttgcactaaa
       61 aggcagcctg atctgtggtt tttctctatt ttacattagc agctgagctg tcagatctga
      121 aatggaaact catttttaag gctttgcatt tacagtggct tcaacaatga aaaatgttcc
      181 ctgacagtaa tagaaggcaa acctcattag agaaacttaa accaaagcgg cacagtgcta
      241 aagccctcag gctgcttcca agcatcttaa gagggaacaa gagcattttt cacatgactc
      301 tctctgcccg tggagtgctc tggctcttcc tgactggagc tgtgcccgca ggagc
//
LOCUS       KCPA01000429             607 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 47024tic ultra-conserved element locus
            uce-5932, sequence.
ACCESSION   KCPA01000429
VERSION     KCPA01000429.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 607)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 607)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47024tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>607
                     /note="ultra-conserved element locus uce-5932"
BASE COUNT          200 a          144 c          108 g          155 t
ORIGIN      
        1 atctccttta atgatgaaac cctggcacca tggttttatt tttcacaaca cagtgcagtt
       61 aagaacccca ctgttattat gaaaatttcc tcagcaaagg cgctccatca cattaccagt
      121 gcaccgattc atcataacgt gcctcgctcc tgctcatcaa caagtctgag tgatgaaaag
      181 atccaatatt atcctgacag tacttcatgc acattctcaa tcacacatta ttacagcatc
      241 catattaatt ttcactgaca cgcgtcctag gcctgttcaa attaggcaaa ccaacgaggg
      301 ggagttgatg aaataccagc atagccacag ctcattgcat tccaatttgc atgcaaatgg
      361 tttatcagga aaattccatt cccagcaacc agcaagtgaa aaacaaccgt aatctacact
      421 tcagggccac catacagagc ttaatgaatc gcaaagagag aaggaagtga cagacctatg
      481 agaggatcga tttccactgg cagctggtaa ggctggtctt gtacagcacc ttgatgagct
      541 ggaattcagg aaagaagatt ttaaaacttt gcatacacaa agccacatat attttataaa
      601 tcaaagc
//
LOCUS       KCPA01000430             660 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 47134tic ultra-conserved element locus
            uce-3008, sequence.
ACCESSION   KCPA01000430
VERSION     KCPA01000430.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 660)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 660)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47134tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>660
                     /note="ultra-conserved element locus uce-3008"
BASE COUNT          198 a          120 c          120 g          222 t
ORIGIN      
        1 gtgggagagg aggcagctca tctccctgta tagagtctaa ttcgtgtctg ttggatttaa
       61 atagctgcaa cagaaagaca agtgtctgga ggtgacggtg ttctgctctt accaacagat
      121 gacaatcatg tcttatggtt tttgatttga cagaatggtt catttcatca gctttcgagc
      181 agcccatttg attcaatttc cctctgcagt gttttactga aaatgacaaa aatgttcttt
      241 tacataaagc ctgcgagtct gtgaacgaac ataaatgtgc tgtgctgttt acatactaac
      301 ttaattgtaa tttaaatgcc cttttcattc cataaatata gccataggct tttcatttcc
      361 ttcaagcctt cagctcagag agcagtttat atgtaaactg gagtcagttg cttcataaag
      421 tgaatttctg gaggaaataa tatagtatat atcaaaatct agataggtaa tgcgaaattg
      481 attgtgacaa tacaatatta gaaacacatc tccataatat tttatttatt acactttcca
      541 ccttttgctg tcaagggaaa atatttcatc ttgcaccgcg aactccagtc tgtagagatt
      601 ttgacctcaa tattctcaca caaatgaata tagtgtgtaa ggtagcacaa ttttccctgt
//
LOCUS       KCPA01000431             470 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 47239tic ultra-conserved element locus
            uce-6073, sequence.
ACCESSION   KCPA01000431
VERSION     KCPA01000431.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 470)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 470)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47239tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>470
                     /note="ultra-conserved element locus uce-6073"
BASE COUNT          148 a           88 c           73 g          161 t
ORIGIN      
        1 atcctgtctc ctctgttgat aacatgtgcg tgcttatgcc atccacccca accaaagctg
       61 ctctgcaatt cctgtttatt tgacttgctt tataaagtaa cgcgtcaatt tgaaaatcat
      121 taggtattcc taccaggagt caaagaccac attcagagtg gattacacgc atgtttctta
      181 aaagtgttaa tgtgctaatc tgctggttac ttgatccagg caaaatgcca tgatattcca
      241 catgagcaaa ataccacagt tcttggagat ttcatataaa tattacccac tgtgtttcca
      301 catttgaagt gttatacttg tctattaaaa tcaacaagct ggaaccagta tatggaaata
      361 agtgatatta ctattttatt tatgaacttc agattttttt taataaaata ccttacaaat
      421 aaggaacaga acatgaatct tgctgttatt tcatgtattc tgtgtaaata
//
LOCUS       KCPA01000432             667 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 47349tic ultra-conserved element locus
            uce-557, sequence.
ACCESSION   KCPA01000432
VERSION     KCPA01000432.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 667)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 667)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..667
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47349tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>667
                     /note="ultra-conserved element locus uce-557"
BASE COUNT          221 a          106 c          118 g          222 t
ORIGIN      
        1 gaagttttgc cattaatttc agcatttaca aaaaaaaaaa atgtgtttct gctaaatgca
       61 gtttcatgaa taataagcag agtttgatag agttttgttt aatttaataa aagcctctgc
      121 agaaactaac agcactagac atactgtttt aattggcatg attacatttt aattggcatg
      181 aaaaaaatta aagacaagga ttttaacttc taacaatggc aaaatagagg gatatggttt
      241 ttaatattac tttcatctaa ggtgaacact gtggaatgga aatacattag aatgaaatgt
      301 cagtggtgcg tacagtttaa tctgtgaaat tttgtcccct gtgctgaata ttactctgtc
      361 tcaattgcat attaaacaac cctatcaagg caggcattgg catctgctgt gctgacacaa
      421 attgtgaatt aaatgaaatt gatgtcctct gtcgtatatt tatgaagacg gaccattctc
      481 tgaagtattc tgtttatgaa gaatttatga ttgcaaactg ttccagaaca aaaaagtggc
      541 aataaattct tttttgtgac cctaccctcc aagggcattg atttcacctc ctgctgctac
      601 ttttgttgca gcataaaaac aatagctagt gctggattcc actgagggtc ttcaaattat
      661 caatatt
//
LOCUS       KCPA01000433             577 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 47456tic ultra-conserved element locus
            uce-2459, sequence.
ACCESSION   KCPA01000433
VERSION     KCPA01000433.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 577)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 577)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47456tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>577
                     /note="ultra-conserved element locus uce-2459"
BASE COUNT          166 a          114 c          102 g          195 t
ORIGIN      
        1 tatttgactt gctggctaag gctttttaaa atgtgtacct ctaatacaga gtgctgtgaa
       61 gctgagagga gagcctgacc tactcttacg aaagaaaaca aaattgagaa aggatagaac
      121 ataggaacag agagatccaa ggtttcccac agtatagtaa tggatatgac ctttaatatt
      181 gaggcctttg gatcaaattt aagttggcat taaaattttc taataaattc cctgctgaat
      241 ctctttaatt cagtaaggtc acaataaagc aagtgctgtc tgtgctattg taattgctct
      301 cagcacgctg ataatgttat agcagagaag ttccagctac tatgctttta ttcttttctt
      361 caagcactct ccttcctcca tgcttgctcc tcctgctctc aagtctgccc ttagcaggaa
      421 gtgaaactgt tttaaatgcc atttccttct cattttgaca catttttata gtgatgcttt
      481 cctgagtctc ttcaacaaag ggaataaaat tgcagaataa ttggaggctt gtatttcctt
      541 tccttgattt tcatccaata ctttaaattc agcctct
//
LOCUS       KCPA01000434             740 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 47567tic ultra-conserved element locus
            uce-5369, sequence.
ACCESSION   KCPA01000434
VERSION     KCPA01000434.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 740)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 740)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..740
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47567tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>740
                     /note="ultra-conserved element locus uce-5369"
BASE COUNT          222 a          149 c          134 g          235 t
ORIGIN      
        1 aagatcaaaa cattacgcaa gttaaatttc cttgaaaggt tcccagcagg agttttcctt
       61 tttgtttgtg cagtacgcga tttcctctca cccacaaaaa acataccaag aatgtgcatg
      121 tgccactaac actaagcagc acttccttaa tcactcattt ccaacaattt atggatgatc
      181 agtggcaaaa acgagcaaaa ataatgaaag catgcaatga aagctcattg agacaaaccg
      241 gcttggactt cctactcatt tctgtgtctc tttaagatgg gggtctgata caaattagcc
      301 actgggaaaa aagtcatctg gtcataaaat acagtacagg gtcactttta tgtaagtttg
      361 ccaaaaggga cataaaccag gacaatttca aactgtgaca caggatagaa gtatattaaa
      421 aaaatctttg ttcctcctcc attgtgctgt catgttgctc agctttatag acattccgag
      481 caccagctct ggcctcttcg cttccacctg gtctacctaa ttaattaagc aaggaagtta
      541 cctcaaattt ttgtactatt tgtttttatt atcatgcact tcttttgatg ttccaggagt
      601 taacctctta atccacagac tctgtgtgtt gtgttctgaa cattttggga tgtctggata
      661 atttggataa ttggtcagga tgttgctgtc gctcatgtta aactttatgc tatgactacg
      721 atcagtatta aggtaatata
//
LOCUS       KCPA01000435             754 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 47680tic ultra-conserved element locus
            uce-2089, sequence.
ACCESSION   KCPA01000435
VERSION     KCPA01000435.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 754)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 754)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..754
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47680tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>754
                     /note="ultra-conserved element locus uce-2089"
BASE COUNT          225 a          136 c          133 g          260 t
ORIGIN      
        1 atgaaatggt caatagcacg ttatcctacc cacatataaa ttaatacctc tcaggttctt
       61 gatgttggtg cttggcactg tctcagtaaa gttcatagct aacaatagct aatgctatat
      121 tagtgataac taataagaat tagtcttgta taacataaag cagctctatg ctgtcagtgt
      181 catgcatctt tatcaggaat acatcataca gacaatggaa attttccata ttctttaaag
      241 ttttgcattc tgtatatttg gtagttagac aaatagagca agctttgctg acttcatttt
      301 cattcttggc agcatgtttt tatcataagg cagatagtca ttaatttaca gaatcaacgc
      361 tgggaacagc ttttgtgatc tcatattaaa ttttcgcctg aatccgcccc ttggcaaaaa
      421 ttactcacat cgttaaaaaa tatttaatta ggctgtagtt tatacccagc tcactgggga
      481 aatgttggaa ttaatatgat ttgcatgaat tctgtttctt ttttctgtta gagattagtt
      541 ttgaattcag ttcggagggt cgctgacact gccaaggact cacaattgtg aaggtcaaac
      601 aggtagcaaa tacttcccct gggtagcttc cctgaaaaga cagctcaaaa ttgcttttaa
      661 ttatgggtta cctaaaaggc cacttgcttt ttatttttct acaatctctc aaatattgta
      721 tggctggaac ttctaggtag accatatcag ttca
//
LOCUS       KCPA01000436             647 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 47790tic ultra-conserved element locus
            uce-394, sequence.
ACCESSION   KCPA01000436
VERSION     KCPA01000436.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 647)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 647)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..647
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47790tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>647
                     /note="ultra-conserved element locus uce-394"
BASE COUNT          187 a          128 c          156 g          176 t
ORIGIN      
        1 gattccatgc aagtggggcc tgaaacacag ctgatccctg ggagcagagc ttcccatccg
       61 tgggagaata ttctggccca ggacatgctg ccctctctcc ttggtttggg gcaggagggg
      121 agactagcaa agaagctgag aaattaaatg aggcccgaag aatgcacgag agtcttttat
      181 caggtacatc ttcctttttc aagtgcctat catatcacgc aaactgctct tgaagagccc
      241 tccatttacc ctctccccta attaaatgtg cacttcatta atgtaaattg ggggtttaat
      301 gctcttgttg aaattctgaa gaaagtgcta tggccttgcg aaatgcttaa gcatcattgc
      361 aaattagatt agggaccaag aaaggcagta aaattagaat gataatggtt gatgtggctt
      421 cctgacaggc gtgactattc agggatcaat gggatggaga acagtttccc cagcctaaag
      481 cgaaaggcag ggacagacgt cagcctacag atgtggcttt tggaagctct ttcaattagt
      541 ttaatttggt aaatggtggg gatttagagg ctcttagcca gtcatacaag acaagaatac
      601 attgaaatct ttttaacata aaataggatt ggccacattt gcatttc
//
LOCUS       KCPA01000437             659 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 47899tic ultra-conserved element locus
            uce-4128, sequence.
ACCESSION   KCPA01000437
VERSION     KCPA01000437.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 659)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 659)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..659
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47899tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>659
                     /note="ultra-conserved element locus uce-4128"
BASE COUNT          217 a          132 c          123 g          187 t
ORIGIN      
        1 tgcttgaaac tgaagagaga tttatcccac aaaactgtgc agcacatcat tacccaaacc
       61 agaacaaagg caggacatca gtattcaagt gttctgggaa ctttaacagt gaaggatcag
      121 ggatttgatg tgatgtccaa gtgaaatgcc agttatagtt tgcacagtac catcagacag
      181 acaatacagt tttgcagaga aactattaat ttaatgttat ggaagcaaaa cattaagcta
      241 tgaggttcca ttatactcaa agcctctgac ccttgtttat cctggagttc aagccctgat
      301 aatctatgtg cttgaagctt cttggtggat aatggaaaat cgtgctccat ttcctctggg
      361 acttcatgct cattagtcac agcataccaa ttaaaagctt tgttagaaaa ccagaggaat
      421 gtgacacagc acatgtacaa accaggaagc ttcattcaca tataacatgg atgaatggct
      481 ctgtatggaa agccaagcat cgcattagca ggtcgtgtgc atcagcctgc aagatcaact
      541 ttttaagtca gcactctcag taagcaacaa attttcattt ttttcgcagc ctataccttc
      601 tttctagaaa atattttaaa tagtttggca attatctagc aagaaatcac taaacatca
//
LOCUS       KCPA01000438             518 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 48008tic ultra-conserved element locus
            uce-697, sequence.
ACCESSION   KCPA01000438
VERSION     KCPA01000438.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 518)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 518)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48008tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>518
                     /note="ultra-conserved element locus uce-697"
BASE COUNT          157 a          100 c          121 g          140 t
ORIGIN      
        1 gctccgccgt aaacccccaa aattatataa cacgcatgtt tttatgcttt gccaattaca
       61 gctggaatag ggactgtttg tttcagcccc tctcaaaatg aggcgaggat gggaaaacaa
      121 cctattttcc ttattaggtt caggagtcaa aggactcagc caggagccgc aggcttcaag
      181 agcatagaag attaagacat atattggatt catgatggag ggcacaaagt tcattttcaa
      241 aataaaacag aattttattc atattccttt taaaattcag attgccattt gccagctgac
      301 ctgtgacatg gcagcagtgt attacatttt caatgagcag cctgtctgga gctggcagga
      361 gaggcctggt ggagcaccac ccttaaatag taagaatttg tcgggattgt tgtcagtaat
      421 gggagatggt gcaaacaggg acagggcagc atatttattt ttaataaggc aacatgcaga
      481 atagcaaagt ccctggcatt atgcaccgaa tagtgctg
//
LOCUS       KCPA01000439             647 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 48111tic ultra-conserved element locus
            uce-7817, sequence.
ACCESSION   KCPA01000439
VERSION     KCPA01000439.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 647)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 647)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..647
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48111tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>647
                     /note="ultra-conserved element locus uce-7817"
BASE COUNT          225 a          116 c          109 g          197 t
ORIGIN      
        1 atgtcataaa ctaaattgta atcttctgct gtaatgcttg agaaattgat atgatgcggt
       61 atcatatctt ggctgagatt gcccattttc agaagtttta aaatattctc tgaatttctg
      121 taaaacacaa tcagagaaca aactcagtgt gttagttcat aaattaaaat ggatattcat
      181 actgggtaac acatttttca tttatgatat tggctttgaa gcccagaact gcaaacacca
      241 ccaaagttgc cagcacagaa gtgaaaaaat tgatgaagga caccagtaca gcatcaaaat
      301 ggcagttgtt gtctctcttg ttgtagcttg aaaaggcaac gactccacca aatccaagcc
      361 ctaaggcaaa gaacacctga gtagcagctt ctctccagac cttgggctcc agcattattt
      421 caagctgttt gaaattagat ataatatatg tcagctataa aatgcatttc tattataaaa
      481 atgctaatag tattttcatt atgacaaaat gaaagctgaa tgtgaccccg caaacttatg
      541 ggccagaatt tctatttatt ttatattatc taaacatcga agatatacag tatgctccca
      601 acaatgagac actactggag ctatgtaatt gaaataagtt atactga
//
LOCUS       KCPA01000440             392 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 48213tic ultra-conserved element locus
            uce-2902, sequence.
ACCESSION   KCPA01000440
VERSION     KCPA01000440.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 392)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 392)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48213tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>392
                     /note="ultra-conserved element locus uce-2902"
BASE COUNT          133 a           80 c           75 g          104 t
ORIGIN      
        1 atgggaaggg atacagggtt tgattttaat ccctgctaac acagaggaaa gaatactcgt
       61 gtcacaactc agtgagtgta aaaattaaaa aaggctgaga ctattgtttg aaaacaggca
      121 aaataattaa aattattatg gaataatcac atatcacaca acaacctccc actcttctga
      181 gcaacaatcc aaaacagctc ctccaaagca ggcccagggg cagaggttct gtatatcatt
      241 caaagaccat ctgtcattca attcctgtag cccctttccg ctattctaag ggcaggctga
      301 aatttagtcc tggcatttct ttttccattt gctaacaaac agcagtgatg gcagataaat
      361 atggcaaaca ataggtgttt gtaatgaact gg
//
LOCUS       KCPA01000441             622 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 48325tic ultra-conserved element locus
            uce-7452, sequence.
ACCESSION   KCPA01000441
VERSION     KCPA01000441.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 622)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 622)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48325tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>622
                     /note="ultra-conserved element locus uce-7452"
BASE COUNT          188 a          123 c          117 g          194 t
ORIGIN      
        1 atttttatct atcctaaaca gcagaagtta atttcaggat ttttacagta ttttttccca
       61 tttacaaaca gaaatgccat ggggtaaagc aattactctg atttactgtt ttcactttga
      121 ttgaacataa agatgtagca gggtctcaaa aaagcagtaa cttaacaaac tgtgctccta
      181 tccacagaca gataaagtac ctattttgct atttcaaaga gtttacctcc aggcagcagc
      241 acagagcaaa catcaatcaa tgacatgtgt ctaagatgag attgatgttt actctcacag
      301 cttttcatct tacatccaat aaattatttt tccttcacca aagtgcctgg ttaaatttca
      361 tttttcactt tgcagtatca gttttaaaac tttagcttcc agcaatttta aagccaggct
      421 tcattgacgc ttcagctttt acagcctgtt tatggtttgt attagccatg aaacactacc
      481 aaccaaacat ggatatgatg agggggagct gagctggggc agccgctcgc acagtggcag
      541 gtgcaggctg gaaggtgtga gattctttaa ttatctgcct ggaaattcca agtccaaaac
      601 ggggttttca ggggcagata aa
//
LOCUS       KCPA01000442             656 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 48436tic ultra-conserved element locus
            uce-1828, sequence.
ACCESSION   KCPA01000442
VERSION     KCPA01000442.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 656)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 656)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..656
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48436tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>656
                     /note="ultra-conserved element locus uce-1828"
BASE COUNT          157 a          175 c          125 g          199 t
ORIGIN      
        1 agcagtctgg agtttgagga cggcatcact tcttctagct tagtcctcct gaattcccgc
       61 cctctgcaga cgttctcctt cccccgcttc tcccccagca ccactcggct aatttctcaa
      121 gtgggataca ctaatcccat atttctctca tagttacttt ctccaaagct gtcttggaaa
      181 cccaggtgcc agtccccgac cagggaaaag agatggcgaa cggctttctc ttgattgtgt
      241 cgatgggaga tgattttcaa ggtgaaattt ctagttcagt tgagtcactt tcattcaagg
      301 cgatgagcaa aatgtcaccc ccacactgaa ccacactcaa tgcgctgttc tcctattgca
      361 tttaaattta ctccactttt cctttctgac acctgtttaa atcaatatct tcctctccag
      421 gtcgtgggca gaatgtgcct ggtctctccg cacagcgctt ctcaaatcca ctaaaatcaa
      481 cacaataatt gaaatatttt caagctgatt acaccgctgc ctgaggctag gctggttgct
      541 aagggtaagc tccctggttg ctagggggag taaatcatct tgcattattt gatttttgtt
      601 atagatatga aaccgctact ccctcgatta aatgtctctc agtctaacac ctatgg
//
LOCUS       KCPA01000443             527 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 48543tic ultra-conserved element locus
            uce-398, sequence.
ACCESSION   KCPA01000443
VERSION     KCPA01000443.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 527)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 527)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48543tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>527
                     /note="ultra-conserved element locus uce-398"
BASE COUNT          152 a          108 c          123 g          144 t
ORIGIN      
        1 cttctcaaac tcactgggct tgccagggtg taacaggaag aatttggccc atcacacagt
       61 ctgtccaggc tgctgctttc attaattttt ctgctgtttg gctttagtag tgtgaaaatc
      121 ccatcttctc aactggaaca cctgcctgcc ccacaaaaag ggtatttgaa gagaagtttg
      181 cacgccatgc tcagacaaag cccagcgtga gtttttagcg tgtcagtcag tgagttagag
      241 ggaaagggta aggagaagct aatcaggatg aaatgagatt aaaggctgtc taattttaca
      301 gcaactgtga tccatcagcc actgtgaaag tgacagtgga aatgaatgat ggagacagac
      361 aggtggggct gtacatttca ctgatttatc ctcaaatgca ctgggcctta ttttattgag
      421 tgaacatgac cgcatttatc atgactgtca tctaaaccca cttccctcca tttaaaaagg
      481 tcactttact aggagggagt aggatagagg cactttcaaa acagatt
//
LOCUS       KCPA01000444             698 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 48654tic ultra-conserved element locus
            uce-2682, sequence.
ACCESSION   KCPA01000444
VERSION     KCPA01000444.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 698)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 698)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..698
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48654tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>698
                     /note="ultra-conserved element locus uce-2682"
BASE COUNT          213 a          142 c          129 g          214 t
ORIGIN      
        1 atcagcacca agcaacccag aagaaaatta tcaattggtt accaagaaac ctaatgattt
       61 catcaatatt attttaccag ttacaaaggt catttggaga agtaatgcca cacaaaatgt
      121 gcttgtgaag tgggtgatgt gtgggtggct gttaagggtc aacacttcat ttctcatttc
      181 tttaattgat acttctgaat gagtattaat tgagctgcaa tgagaagagt gtgcagtttg
      241 acaatgcaag tgacaggatg gaagtgccat ttgcagagtg tatataacca cagctaacac
      301 cctcaaagcg ttaattccat tttatgtctt tcacatttaa tagcaaattt gccatttaat
      361 ctttaagaca gaagttactt attctcaatc tacctctcac ttgcactgat ataatctcat
      421 gccactcaga ctggcctgtg gcatgaagca catcacactt tcaaatcagg tccatttttt
      481 cattagctca tatccttcct gagatgccct cctttacaga tggctgatca gcaatcaaca
      541 ctagtttgtt tcaatcagaa aagcagccgt aacttctcat ttaaagactg ttcctggaga
      601 agcgcattag tcgaaggcat aaagctggca ctggagcaac agtgactctc acaactgatt
      661 tctttttttt aaagagatag acctcatgtg gagatctg
//
LOCUS       KCPA01000445             427 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 48762tic ultra-conserved element locus
            uce-5899, sequence.
ACCESSION   KCPA01000445
VERSION     KCPA01000445.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 427)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 427)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..427
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48762tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>427
                     /note="ultra-conserved element locus uce-5899"
BASE COUNT          127 a           74 c           86 g          140 t
ORIGIN      
        1 gttgtaagat ttgtatcccc actgaggacc gagatgtcat agggatagag aaaatgccgt
       61 tcactttatg gattactgtt aggtcaacaa aactttggca gcattgatta acttgacagt
      121 gagtacagca gtacatttat cacttatggc tgtgctgtag aaaatctaat aagaggcaaa
      181 caattccctt tagagcagta acaggttcac tgtggctaac ggtgcatgca ctggaaattt
      241 ctgactttaa attataccct tgctgctagt tgggtcattg actccaagct actgcacttt
      301 cactactatg ttctgtttta ttaatttgat caaagttgtt ttggcttcta taaatgtttg
      361 caagccatat attgaagttc atataaactc atgagcattt ttgaagaagt caaggaggat
      421 cataatc
//
LOCUS       KCPA01000446             458 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 48865tic ultra-conserved element locus
            uce-2537, sequence.
ACCESSION   KCPA01000446
VERSION     KCPA01000446.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 458)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 458)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..458
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48865tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>458
                     /note="ultra-conserved element locus uce-2537"
BASE COUNT          150 a          105 c           84 g          119 t
ORIGIN      
        1 aaaagaaaac aaaatcacag ctggaccctg tcctacacga ggtgttagaa aacaggagcc
       61 atgacaacac attcatttcc actaagggtg tgtgaagcag atactgcccc ttctgtagct
      121 ctcgataaac ctagtcactg acaaacactt gtggaaaaac atatgcacca gtctcctgca
      181 taataccagc tgcaactata acaacaaggt tataaaccta aaataagatg ataacatgta
      241 aatactgggt tatttagtct acagtacagt aatctggata aaaatgacaa gggatagcct
      301 aatttccttt ccccaaacaa ctttcacttt cctacgttgg atcgaccttc aatgcaaatc
      361 ttaacctcct gaggaataaa agaaggcttg ggaagagtca aaggtggctc ctcttctgat
      421 ttctctagtt ttcgtgtttc gggggctgac cacctcct
//
LOCUS       KCPA01000447             408 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 48972tic ultra-conserved element locus
            uce-153, sequence.
ACCESSION   KCPA01000447
VERSION     KCPA01000447.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 408)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 408)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48972tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>408
                     /note="ultra-conserved element locus uce-153"
BASE COUNT          127 a           62 c           69 g          150 t
ORIGIN      
        1 ttatagaact gttttaatac ctcactaact attgctttct ccctcaaggt tttcattgtt
       61 ctcataccct agaaacaaat tgataattct gaaaaaaata aagtatttct tagttgtttg
      121 ctaacagcag aatagcaatc agtcaccaca gggttactac aatgggcatc attatatctg
      181 gatccttatc aatttcacta tatgggtaag tattattgct gcataccgga actcctttgg
      241 tgttattgct taattttaat tgtgattgta aaatgtgaaa aatgtggata tttaaaccac
      301 aattaaacac ctgctatact tgttgtgcat tggcatttaa agatatattg agtatttaaa
      361 atctgctgaa tcagatatta tattgagggg ggatctgtga ttggtttg
//
LOCUS       KCPA01000448             544 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 49082tic ultra-conserved element locus
            uce-3966, sequence.
ACCESSION   KCPA01000448
VERSION     KCPA01000448.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 544)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 544)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..544
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49082tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>544
                     /note="ultra-conserved element locus uce-3966"
BASE COUNT          170 a          118 c           96 g          160 t
ORIGIN      
        1 acatgtatat ttaagaatga ttatacagat atagaagatg atgtgtactt tattgccctt
       61 ctaaatgccc tcccagaagc ttttctcaac actgtcaaac attaaagact tttgtttgaa
      121 cgtgcggaat ttgctttgta ttgccttgga aaggaataca tctttcacta ccacaacctt
      181 ctgtaaccct cctgccctct tcactcccac acccccacac aaagacactc cttaattgta
      241 ttactgttag gctgacctcc aacccctact aaaatgagga caaggctagt tttgtgtttc
      301 atgggataac aatttatgag caattaaaaa tgaagagaca caaagcattc atcacagtct
      361 cagctagaca ggcagctgag gtcaaaggtt ctagcaatga agtgtgcaca atatattttt
      421 atttctgttt tcactaagaa ggaaacgggt tagctaaaaa ttatggcatg cagcctccag
      481 ttcaaaatag gtgcacttaa tctttcaaga cagtccatgc ttgggcagat aggttatgac
      541 agca
//
LOCUS       KCPA01000449             655 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 49192tic ultra-conserved element locus
            uce-910, sequence.
ACCESSION   KCPA01000449
VERSION     KCPA01000449.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 655)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 655)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..655
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49192tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>655
                     /note="ultra-conserved element locus uce-910"
BASE COUNT          134 a          142 c          140 g          239 t
ORIGIN      
        1 ttttcctcag tttcatgcgg ttataaaatg gctgtgtatg aatgtaattg gtgctacctg
       61 gaaatctata tcatttgata tgctaatggc tctctgagca tcctcaaatg aacgggaact
      121 ttccctctgc tggagggggc cccagattgc agtgattatt ctgaactgca tgacctcctc
      181 tgcatgctta ctgtgctgct ttttattttt aacagactaa cctgttttct ccgcttctct
      241 ttcccattcc ttatttaccc atgtgttttt attaacggat tctcttgccc ctgtctgttg
      301 gtttttagct cttcatggtt cgcactatga cagagtcctt aaactctgct gagctgttga
      361 agcagctcaa gtctctggga ttggaaaagc tattgcatgt gacacacaag tttctgaggc
      421 aatcctacat ctatccgcct cttttaaact ttggtggtaa gacattactt ttactttttg
      481 tggtgatgtg aactgttgca aatggtctgc tgctgagtgt cagttcccct tggcacgggt
      541 aggcatttgt gctggtgtgt aggttgcatc tgttcctttt atccacacag tgccagtttt
      601 cagtttgaag tggagcagtc gcttactgat agtaattctc agtgttgctc aacta
//
LOCUS       KCPA01000450             648 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 49303tic ultra-conserved element locus
            uce-472, sequence.
ACCESSION   KCPA01000450
VERSION     KCPA01000450.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 648)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 648)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..648
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49303tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>648
                     /note="ultra-conserved element locus uce-472"
BASE COUNT          194 a          118 c          127 g          209 t
ORIGIN      
        1 atatttagat tctgattaaa agagaattga gcactacatt gttgtacttc agaaagcatg
       61 gaaaagtgct ggcacatttt tccctattct gtgccttctc acttccccaa cctttctgat
      121 gtctttccag tttggagctc ctgcttagat aaaacagatg actttctggg cctgcttctg
      181 ctaacagcag gcaggagcaa cggtgactga ttggttgaaa catgaggatt aatgggtatt
      241 tatatttcat taaattttat gctcactgga gaataatgta tcactcgcag atattgaaac
      301 atatgtcaac cctatccact tacatataat tcaatttgac ttaaatgcat tgatcaaatt
      361 ttattaaagt ccaatatatc ttccaaaaag gcctgctaac acaatattgc tgcttcacat
      421 tcatcagata aaaggaggca attgtgttgt aattccattt ataccatttt tcgggaaaag
      481 ggagattatt gtgaagcgaa tactcattac aaggtgactg gtgttggctg aaggacttga
      541 gacagagatt attaagtgaa ttctcaagtg gtgcccttta gttaaaatta ccccagggtg
      601 ggtcatgcct gttttcatcc ccagtggaaa agagagatca gcattgtt
//
LOCUS       KCPA01000451             710 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 49417tic ultra-conserved element locus
            uce-6944, sequence.
ACCESSION   KCPA01000451
VERSION     KCPA01000451.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 710)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 710)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..710
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49417tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>710
                     /note="ultra-conserved element locus uce-6944"
BASE COUNT          192 a          125 c          151 g          242 t
ORIGIN      
        1 agtatgtcag aggagctgtt gcagtaaaat gtaagcacat catcttggag ggggtacagc
       61 gtggtgggcg tattgttggc tcaggaggga gagaaagatg tataatttaa tggtatatac
      121 aatccactga tcctattact atcctccctg gagctcttgt tagtttcaat gggagtgagt
      181 gaaattgaca tggacttgca ttcctggtca tgtgcccccc tttctttctt ctcttgtgat
      241 ctgagatccc ctttttgttg atgttgcttt cccacttaat tatatgcatg taggttaaat
      301 gaatacctga cgaaagggcc cacgtttcaa ggcagtgaca tttgatagct gagaggaaaa
      361 gtggctttaa tgaaaagcaa cctttggaat tcctgcttgt gaaaaatcca attcagcttt
      421 ttgtgctgcc agcaagaaat gatcagtagc accagtgttt atggtatgtc cgttttggga
      481 tctacttcct ttgcatctaa atagcaaaga caaatttaaa tagcatgata acgcaccgaa
      541 gactctgcat gcaaatattt tgtaataaat atctaatgtt taatagtata tttttatata
      601 agcatctctt gctatcattt gtttatcgtt tctgctttat ggcattagtt ttgtccattg
      661 tattgatctc agttgtaaaa cctgaagttg catgttacca gcagtgcact
//
LOCUS       KCPA01000452             719 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 49528tic ultra-conserved element locus
            uce-5344, sequence.
ACCESSION   KCPA01000452
VERSION     KCPA01000452.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 719)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 719)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..719
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49528tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>719
                     /note="ultra-conserved element locus uce-5344"
BASE COUNT          261 a          119 c          130 g          209 t
ORIGIN      
        1 tttcaacacc aatcacttat ttatgtagta tagaatatca acacagtgaa acagggaaat
       61 aataaacaac cctgcagagg tgactttagg agacagtaga ctgagatgtt aaaaacaaac
      121 aaaccaagtc actggagagc tatgcttaat acttgaaggg cagcatcaca cacctagaat
      181 gtctcatacg gctgagaaaa gaagactagt tagtggccaa gaacatcctg atgttctgtg
      241 ctacaaattg aaagtgaagg ttactttatt gtagacttta tcttaaagca gtaaaacggg
      301 tagctgcagc tacaactgaa agtattgatt ttgtaatttc agcaaattaa gaacaagaca
      361 ggaaacctat taaacctttc cactgattgc cagggcactt tttggtgatg ctggtgctga
      421 cattaaaatt acatgcgcct gtctctttaa agccaaatat atacatttta cagaagatag
      481 agccagctaa catgctgaaa agggatcttt ataaatctgt gtaatttcac atttcagatg
      541 tgaaactttt gaagcctgat gacatgaatg tcaagcagca catctaaaat tttcataaat
      601 tatggttcat gttagatgtg ctttcattac attttaataa attaaaattt tcacaaagcc
      661 agaataataa tagcaaagat tgtaatgcta gtaatagcat tatctgtcag aacattatg
//
LOCUS       KCPA01000453             463 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 49636tic ultra-conserved element locus
            uce-2719, sequence.
ACCESSION   KCPA01000453
VERSION     KCPA01000453.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 463)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 463)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49636tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>463
                     /note="ultra-conserved element locus uce-2719"
BASE COUNT          167 a           81 c           78 g          137 t
ORIGIN      
        1 tcgtccacct ttataaatac acttaataat agatcagatg gtttttctag ctagcttgtt
       61 gcctggaatg gttagggggt agacactgac acagcctttt ccttgatgaa caaaccagtg
      121 ctgtatttca aacaaggctt ttacactgag ctaccccagc acggtaattt aatgaatcta
      181 catttcatga ctgaagtgat aaggatgaaa cattttaaaa taaccaaaag gtagatacac
      241 caaaaaagtc tgatgaaaca ttaaatgaat gtagtgtaac acattatctt tgcttctgca
      301 catccaaaaa gtgcaatgaa ctaaaacatt gcattaagcc aagaataaag ctaaaaatta
      361 aattggctta gaaagatcta gtgtagtggt ttatgcacta agaacgctgt aaatttggtc
      421 atttaataac attctcttta cctctgaaat gcacattaaa agc
//
LOCUS       KCPA01000454             754 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 49747tic ultra-conserved element locus
            uce-1010, sequence.
ACCESSION   KCPA01000454
VERSION     KCPA01000454.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 754)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 754)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..754
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49747tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>754
                     /note="ultra-conserved element locus uce-1010"
BASE COUNT          234 a          133 c          153 g          234 t
ORIGIN      
        1 tttggtaaga accaagtgca gcatcagatt agagacctta aagggcagta gctggaggca
       61 atcaatagct atctctgaaa agaggctagg catcaggctt tgatctgccc acctctttgt
      121 atataaatgt aatcttggat cttgattgaa tattcccact ctgattttgt aattaaaaca
      181 tcatttatac tgagaataat taagacaact gtacatttga ttttaaaatc agttttgagt
      241 attgtgcctt gtcaagctac aagaatggtt cctgcagctt tacaacttag cattgagagg
      301 cagacagtga ccgcaggcac ctgagtggaa ggtttgacag tttgataaat taggaatgac
      361 acttgccaaa atggctgtcc ttccctcagc ctgccagtgg agcatttaca cactgttaat
      421 tgaattggca atttgtgtaa cagtacctgc ccctgagctt ttgtaatgct ggagctgcca
      481 tttagctctg ataatccagg acttgggaat aaggacgaaa agcttcacat gatattattg
      541 cagatttaaa atgacagttg gggaccttgt tgccaatttc ccattaaatg agaaataatt
      601 aacaatagca ataacaaagt cttataaagc tggaaagtta aattgacttt tcagcagtag
      661 tatggtttga aattgcttct agtgtgatta tcagattgcc ctttcagtat tatataccct
      721 aaatagtatc atctcatggt ctgaataggc aata
//
LOCUS       KCPA01000455             333 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 49848tic ultra-conserved element locus
            uce-299, sequence.
ACCESSION   KCPA01000455
VERSION     KCPA01000455.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 333)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 333)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49848tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>333
                     /note="ultra-conserved element locus uce-299"
BASE COUNT          104 a           48 c           53 g          128 t
ORIGIN      
        1 atttattttg cattttaaag aatacttatg agaattgtga taaattagca gtgacaaact
       61 acttcttgca ggctgatttt gtgtggagag tttaattaaa cattgcagct gtttatctct
      121 atggtgatta aattttcata tgtaaattac atgtattaag atcaagatac ttatgtaaat
      181 gtcacttgcc ttaatgtttt gtgttactgt tattaacatc tcaccatcag cttgtaatct
      241 tcttgtattg cattacgccg ccgtgcacta catgactaaa ataagtagat ttatatctta
      301 ataacaagaa catctcgcta tgtaattgag atg
//
LOCUS       KCPA01000456             347 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 49948tic ultra-conserved element locus
            uce-7035, sequence.
ACCESSION   KCPA01000456
VERSION     KCPA01000456.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 347)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 347)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49948tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>347
                     /note="ultra-conserved element locus uce-7035"
BASE COUNT          127 a           60 c           50 g          110 t
ORIGIN      
        1 taagaacaat gttttttgtt accaaatgag aaggggccta gagcaaactt cagagcagtt
       61 attaacacaa gttcacattt actgaaagag ctgggcacct tcacgtacat tgcaatagct
      121 gtgagttaca caatatctat atcatttttc acagctttgt cattagctgg taatgatttg
      181 attattttgc agatgaatca cagtataaat ctctttcaca aacactacct ccaagtatta
      241 atcaaaacca ttaaggcaaa gcagtcagtg caaattaaaa aatttgcatg tctaaattaa
      301 aaattacagt aatacatcat aaataaatct tttaaattct ctatggt
//
LOCUS       KCPA01000457             728 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 50056tic ultra-conserved element locus
            uce-4981, sequence.
ACCESSION   KCPA01000457
VERSION     KCPA01000457.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 728)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 728)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..728
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50056tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>728
                     /note="ultra-conserved element locus uce-4981"
BASE COUNT          245 a          125 c          169 g          189 t
ORIGIN      
        1 aataatattt caggttttaa aagcaattag catattaaat atcaatgtac aaggggagtg
       61 tacaaagcga ttccatagta aattagtctg aaaattgtcc taattgttat gccagatgac
      121 gtcctctaca ttttgtcttg ggagaaaaag atctttctgt ctaaatgcca ttatgtgtca
      181 tcctagctga gcctcctgcc tagcggggac attgaagttg tacagcagga gccgcttctc
      241 aggctttaag aactacagta aatcttcaaa caatttatcc aaacaaaggc cagtgtgtgg
      301 agagaaaaat acacgggaag cagatgaata agcaacatca attatggggg ggttgacctt
      361 tctgccccac accatggcac agatttcaca ccaaatcgca gcagattgaa gttgacatgc
      421 ctggagtgaa aacactggtc ctcacaatgt tgcaactcta cattcacaga gctgtagtaa
      481 ggagaggagg aagaaaatga agagaagggg agggggaaaa atcacatata atgggcctgg
      541 gtttatttta cagagaacaa aatggctcaa tttgagcact tagactgtca aaattggcta
      601 gtgtgagata cgagaggttc atccaaacgt gaatcaggtg ccttcagtga tagaacctag
      661 aagaagggat tgggagaata aaggctgttc ttaaaaactt gttaacgttg ttagagatca
      721 tattatat
//
LOCUS       KCPA01000458             582 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 50158tic ultra-conserved element locus
            uce-5363, sequence.
ACCESSION   KCPA01000458
VERSION     KCPA01000458.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 582)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 582)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50158tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>582
                     /note="ultra-conserved element locus uce-5363"
BASE COUNT          155 a          103 c          160 g          164 t
ORIGIN      
        1 tgatttccaa agtcaaatgg gagagagcca tgctgtgctc catatacaca aaacaaggat
       61 gaattcaaat gggcagggtg gaattgctgc tggggttggg gaaagtctgg ctttggaaga
      121 gtgactaagg ctgatgatgc aaaataactg cccagcgtca aggatgaact tagaatccat
      181 gtggtaaaat gaggccatgt cttgtgtttg tcattgcagt acttcactgg cctagagtgt
      241 ggacacaagt tctgtatgca gtgctggagt gaatatttaa ctaccaaaat aatggaggaa
      301 ggcatgggac aggtaaaatc ccaactcatg gcttatttct ggaaattctg tgagagtctt
      361 tctgctaaag tttggggctg caggtaggtg aatctggaga gaattctgtt ctgggctggg
      421 ggagaggcac actcctttgg ctgtggattg tagtgaagtc tgttgccttg gaattccttg
      481 tgatgcaaaa tcaggataac cagtgttcct cccatttttt cagaccattt catgccctgc
      541 ccatggctgt gacatcttag tggacgacaa tacagttatg ta
//
LOCUS       KCPA01000459             691 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 50267tic ultra-conserved element locus
            uce-7666, sequence.
ACCESSION   KCPA01000459
VERSION     KCPA01000459.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 691)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 691)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..691
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50267tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>691
                     /note="ultra-conserved element locus uce-7666"
BASE COUNT          227 a          118 c          123 g          223 t
ORIGIN      
        1 ttcttttcac cctttgtgcc ctttcaaaat tctgcctctt tctgctttta aaataatgaa
       61 agtaccaaaa agactatgct tgtaattaaa agtcattttt aaataacctc agaagattgt
      121 ttctagaaat caaaacatct ttatggtccc atttctaagg aaagaaagac aagtgactgg
      181 gatcccgtac actttactgt agtctacatt aattaccttc tattaaaaaa tgacaaagac
      241 ctttttgaaa gggaatctgg cactctttcc acagaaatga tggcagacac cctactctgc
      301 tgatttcttg acacttctaa ttacctgtat tcatttgaaa tcgtttcctt tgtagtgagt
      361 tattggcatg attttcagag aacaagagga aaatggaaaa cattttagca agttaagaaa
      421 aaaaaatcaa caatatcatt gtttgcagct tttgttgaaa ctagctacgt gagtcatttg
      481 agggacatga aggtaaatga aaggttatac tttgccctgc acgttgtcac tggtatttgt
      541 aatgtcaata actgtagaag gttgtcagga aactggaaag ataaaggtca atagcaatga
      601 caaatatatc attgtatgtg tttgaatatg caatatcagc ctaatctcac ggtggaggtt
      661 ttcacaccct ggaattatca atcaggtgct g
//
LOCUS       KCPA01000460             636 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 50378tic ultra-conserved element locus
            uce-6725, sequence.
ACCESSION   KCPA01000460
VERSION     KCPA01000460.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 636)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 636)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50378tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>636
                     /note="ultra-conserved element locus uce-6725"
BASE COUNT          221 a          122 c          110 g          183 t
ORIGIN      
        1 tatgtaacta gacatctcaa tttaacaacc agacatacat ttaacagcat taatagctag
       61 gcacttaatg gatcaattcc cactgtttgt gtaatgtgga aataaaaggc ttattaaatg
      121 acaagctttc cctggtttgt gctaattaat tatacactgc atctgactgc taatttagtg
      181 ggaaaatgca gcccaaaact atggtttctg cttgaacttt gcctcagcac cacctaattc
      241 tgctcagagt gcagctgcga cctgcctctg aacgacggca gtattaaatt agagcacaag
      301 gccatcaatt taataagtac tgtagcaggt aatttgaata aggacagtat tagtattctg
      361 ccagtgcaca actaaaagca gctgaccttt cagaccagag aagaacacat ctagctgaat
      421 cggtgaacac agtaataatc tgaccatgtt aagagtgcca agagagactt ttacagctct
      481 gcacccatta ctatatatca gctattctac agtatataag aacactttat gtacagaaaa
      541 acaaggttat aaatagaaca aaggcaatgt taaatatata tttcaactgg cacatttgaa
      601 aattttccgt attaccttga tttatggtat aaagaa
//
LOCUS       KCPA01000461             648 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 50487tic ultra-conserved element locus
            uce-6888, sequence.
ACCESSION   KCPA01000461
VERSION     KCPA01000461.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 648)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 648)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..648
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50487tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>648
                     /note="ultra-conserved element locus uce-6888"
BASE COUNT          207 a          125 c          116 g          200 t
ORIGIN      
        1 ggagttccca ccaatcctct tgggctaacc taaataattt tatgtctgtg tcataatagc
       61 cataaaataa ttctgtgtca aaacaatttt gtaaattagt gtttcaacat ctgtcctgag
      121 tgcagctgaa caaaaccctt tgtgtatagc tccagccttt gcgcctcaag gactccccta
      181 ttatacacct gttcttgaca gattgaggcc taaaacagga gagcttagtc acacattaac
      241 cagcaggaag aaagtctctc ctttttatta atgcctgcct acgagttcag tgtttggaat
      301 tcagtcctac ctataaatca acatcagaga ctacaaccca gtgtgttcaa gagctctgtt
      361 taaacatcaa aagaagaaca cagacaagcg ctatggtaga aatatagcta atcacttgca
      421 aatacatctt tcctgtcagt aggagcttaa cctttttgtt taatgttact gcaggaaaat
      481 gcacttattt acattttctt taaagcaata gacaggttta aaaatgatca tatttattgc
      541 tgcaggattt tagaagtgtt cagttgcagg aagatttatg gaatcttggg aatttcaggg
      601 cttcacaatg attaataaga acaggaatta ctacgattgt tgaaaacg
//
LOCUS       KCPA01000462             597 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 50596tic ultra-conserved element locus
            uce-4695, sequence.
ACCESSION   KCPA01000462
VERSION     KCPA01000462.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 597)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 597)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..597
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50596tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>597
                     /note="ultra-conserved element locus uce-4695"
BASE COUNT          190 a          120 c          123 g          164 t
ORIGIN      
        1 ttttgtgtta ttagcatcca agagtgctgg gggtgagaaa aaggtacaag agcagcagga
       61 gactgttgcc ataaacagga tttcacagag taatgcatct ttctgagaca tccccataaa
      121 ttacttctaa agttagcatt atttctccat tcaaataatc agaaataaaa catcagacag
      181 tgaacattcc cccagtgact aactgtgttg ttcgggccac tcctcaaccc tccactactt
      241 tgcaaaagac actagaagtt ccttctgtga gttgccaagg tgctcccagc ccattgtgca
      301 gaatcattgt caggttaaat tagggagtac agactccatg agtgtaaaaa aatcaatact
      361 tgatggaaga ttgctccccg gaaaatctgt tttgattcca ggattaattc gtgaccaaag
      421 gcttctgcaa aatgacatgc cattagtcag aaaatgaaca cattctaccc ttgaaattgg
      481 atggaaatat gtcaggtgat tgacctattc attctctttg ctctctgggc agagagagta
      541 ggtgtggtag ctgtgaatta ggaaaccagg tccattttcc aagcagtaaa aaaaaaa
//
LOCUS       KCPA01000463             497 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 50705tic ultra-conserved element locus
            uce-5429, sequence.
ACCESSION   KCPA01000463
VERSION     KCPA01000463.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 497)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 497)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50705tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>497
                     /note="ultra-conserved element locus uce-5429"
BASE COUNT          139 a          115 c           73 g          170 t
ORIGIN      
        1 ttttctaaat aaagcacact gtctccattc agcccatgga gaaagggtgc ctactcaatc
       61 ctcttaccat tgacaatata ataaaaccag aggaactttt ttgaagtaga tctgcacatt
      121 ccacatttgg attgaggggc aatggactgt ttaaattgct atttacattt ccagctgttt
      181 taccagtgat ttgcccaact taatagctct ttaagctttt aaacaagaaa atagctattc
      241 tcacgactca aagaagaaac catggttatt tcagtctgcc tctattgtaa aaggcttaga
      301 cccctctctc tttatagatg cccttccctt tatagtactt cccttttcca tctccccctt
      361 ctttctaaac cttcttccat ttttagctca ctttttacat tttttagcac cataatgtat
      421 ctttgctgat actgctgatt caaggaaagt gtttgcaagt agtcaccaag gttcccaaga
      481 gagacttaag ttagcca
//
LOCUS       KCPA01000464             554 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 50811tic ultra-conserved element locus
            uce-1977, sequence.
ACCESSION   KCPA01000464
VERSION     KCPA01000464.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 554)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 554)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50811tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>554
                     /note="ultra-conserved element locus uce-1977"
BASE COUNT          187 a           99 c           89 g          179 t
ORIGIN      
        1 cattttaacg caattttaag tgccataaag ggctttatat ctttgaaaag cacttattaa
       61 aaattacatc ttaaataccc tacactagaa agtaagttag cctataagcc tgataggggt
      121 cagggtaata acacagaatg aacaaattac actgtcattc cacttaaatt atttaagtta
      181 tttaatttga cctgtagata gtctcttgtc ttctcatcat gcctgacttt taagtgggag
      241 gtcttcattc atgatgatcc tttaatggaa gcaaagcttt ctccatttaa cccatggtgt
      301 tatcaatcat gtacagggat aaatgaggct gtaagatttt gccagtatca caaatgacac
      361 tgtgacctga ggccaacatc tttatttgct tctccagtga ttcacttcag cagatattaa
      421 ccaattttat aatccatgaa aggcaaaatt aaaggacacc atccataaaa cagaataatt
      481 cctatcagca acaaagtgat gtctgtatta tcttataaat tatatggcca tacagtgtgg
      541 taatgtaatg aagt
//
LOCUS       KCPA01000465             730 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 50919tic ultra-conserved element locus
            uce-5146, sequence.
ACCESSION   KCPA01000465
VERSION     KCPA01000465.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 730)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 730)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..730
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50919tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>730
                     /note="ultra-conserved element locus uce-5146"
BASE COUNT          216 a          143 c          154 g          217 t
ORIGIN      
        1 atatgggcct attagtcatg tcctgtagcc acggggaaaa gtgtcaatac ccaggctgag
       61 gaatgaagaa aaagctgcag gatggggcga gagtggagag tttgggaagg acgtgaggtg
      121 ttagcctgat ccctggctct ttgtgccagc catctaaact tcctgaaatt atctcaagca
      181 ttgagatcaa taaaatgagt gtggtaatga aagtgacagt gctcttctgt tttcccattg
      241 aaatattccc tggcctagtt caacagaaac atttttacat tacaactgtg aaatcttggc
      301 ataaagctct cctttgtgcc cttcattatt ttctcacaaa tatagtccat tgtcacatag
      361 ctgaagttaa tttgatcaac attgggacat ttaactttta tgtccggtca aaggagctgt
      421 ttcatgctga ttttgagtat tgaaaagaaa tgattgccag aaaaataatg ttactattaa
      481 caattcagag caattagttt cccagggaga ggagatgtga tgcaccggct ccacacaact
      541 attctttgtc attttatgga tgctcatcag tcaactgtca cctcttctca aagacccctc
      601 caatctaaat gtttctcttt gggcttttcc cagaactagc agctgaatga gcaaaagaaa
      661 agccacttag tttctaggca aaggaaaact ttgctctaaa gatctgggtc atttgggaag
      721 atcctcaaag
//
LOCUS       KCPA01000466             593 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 51032tic ultra-conserved element locus
            uce-799, sequence.
ACCESSION   KCPA01000466
VERSION     KCPA01000466.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 593)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 593)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..593
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51032tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>593
                     /note="ultra-conserved element locus uce-799"
BASE COUNT          149 a          156 c          144 g          144 t
ORIGIN      
        1 cccccccccc ccccaacaaa gtcttaggtt cttcctgctt gtaatttgtc gctaatcagc
       61 tgtcagtgtc agagcaatga tgagaggttc atctcttgct gagggtaatg gccttaaaag
      121 tcaccgagtc aatgtcaatg ggatctctcc aattcaatca gagccctgga tgaggaatgg
      181 cccccgctga cattagcact cattttgagc ccaagcatct gggccctagt aaataaccat
      241 cagtgggtgg gtccggggga caggtcatta gccccacgaa aaataaatat cgtttccctt
      301 gatggctgca agtaatttag ctcagacaag gaaatttcac cctagattaa gtatgatgag
      361 ccaatatcag tcagaggagg ccaaacagtg agagcttgat gagatagagg gaaatttata
      421 tgcagctggc tgaatgcaag atgagtttaa agaaatgatg ttctcttcca cttcttgtcc
      481 atgtgcagtg tcaggcactg tggtggctga caccccctcc ccacaccctt ggggctctcc
      541 ccgcgcacag gcgcacgtct gtgggctgcc agccctccca gcagcagcct ctg
//
LOCUS       KCPA01000467             622 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 51139tic ultra-conserved element locus
            uce-7987, sequence.
ACCESSION   KCPA01000467
VERSION     KCPA01000467.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 622)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 622)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51139tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>622
                     /note="ultra-conserved element locus uce-7987"
BASE COUNT          212 a           89 c          117 g          204 t
ORIGIN      
        1 gaaatataat tagatttatt tttcaaggaa gaatataatg tttctcagga gttcttaatg
       61 agatatttac ctgtattaga ttatacccac atacccacag tgtttgtgct tgttaaagcc
      121 tttcagtcat tctaggctta gggaaatagt gtccaaatgt accatattta gcttctatct
      181 caaattctcc cgagctgtca atttaggtgt taaagagacc atttgtaaag cttggctggg
      241 atttgccatt attgactgga atgtgtgttt atcattacat tcaatgatga aagtggaaca
      301 tgtagcatat gaataaatgt cagcagatgt ttcttttaaa tggcctgatt tcaacctcct
      361 gttgtttgtc ttgaatacaa atattaaaaa agaaaaaggc agaatttttt atgacataag
      421 tgcaagggta gttatacaac aaaaataatg atgaaagtca gagaagaacg aggaaagtat
      481 aattaataag aattatgttg atgctttcat gctgctctct ggtttgatat tataaaagac
      541 acaagaacag cagttcagtg tgggatatat cactctacag tcactccaaa gaagtaagga
      601 aaacttgagt ctattctcag aa
//
LOCUS       KCPA01000468             579 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 51250tic ultra-conserved element locus
            uce-7520, sequence.
ACCESSION   KCPA01000468
VERSION     KCPA01000468.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 579)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 579)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51250tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>579
                     /note="ultra-conserved element locus uce-7520"
BASE COUNT          200 a          110 c          141 g          128 t
ORIGIN      
        1 aaaaactgat tttcagaagc tcatatattc aaatctccaa agtctatttg aaggcacatc
       61 tgaaggtgca ccctgcaacc tgtgtgtagc aaactctttt gaatcttgtc cttgaaacaa
      121 aaattagtgc cccttgggag ttcagcagtg tagacaacca ctaactgcag aatgactgaa
      181 agcagagctg agagtccttg cagctgggag ggagaagggg atgagagagc gagggaagat
      241 gagaaaccct tcaggagcca tttgggagac actcactggg aagaagaaag aaagacatgc
      301 actaaaaaca acagaaacac aggtggaaat ggcctactgg gaaatcaggc tgtcaacaaa
      361 caaaagccga aggccagaaa gcagtttcag tagcagcccc tgctaacagg gcttcagtgt
      421 tcagtaaata aattagcagc aggtttgact gtttggaaat tagtagtgac atgatgaaag
      481 cagcaaatga cttgctttta tctggagtgg aaacactaaa cttccaaata aatccttgcc
      541 tgtatcagga gaagcagaga tgttatatca gcttagact
//
LOCUS       KCPA01000469             639 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 51356tic ultra-conserved element locus
            uce-400, sequence.
ACCESSION   KCPA01000469
VERSION     KCPA01000469.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 639)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 639)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..639
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51356tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>639
                     /note="ultra-conserved element locus uce-400"
BASE COUNT          211 a          134 c          113 g          181 t
ORIGIN      
        1 ctatgtaccc aaagcaaagc tggcatttgt tgggcatcaa aaaaataaat aaataaaacc
       61 acacaactgt caggaggggc ttctctgaaa actggctgat ataccttcag caaatcaaag
      121 ggcaaaagag atttcatgca atgctagttt gaaagcatca gttcattaag gatattaatt
      181 ttctgataac tacacattta agcatgacac actggagcag tatctacagg atttagcaat
      241 tattaatgcg tgacagtttc aaatgctaag tgaatcaatt aaacagcagc attcacaatt
      301 tgagaagaga taactgcttc ataactgcct aagactacaa ttttcacatg acaaaaaagg
      361 gccattcagg ctccttcaaa acctgacagg tcaagaaaga agtttgaaac aaaagcacct
      421 tataaccatc atctctcctc tttacttgtc agatcaactt tgctagtgtc tccgctgaaa
      481 tggcatcacc atgccagctg ccacaaggtg atttttcatg tcttgtcaaa gaaatctttt
      541 attctatttg ctctgcatta acatgttaca tttattgatc aagccctttc tgcagccaca
      601 gcagggcact gtgctcttat gcctaagggg gctttgatg
//
LOCUS       KCPA01000470             755 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 51468tic ultra-conserved element locus
            uce-3448, sequence.
ACCESSION   KCPA01000470
VERSION     KCPA01000470.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 755)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 755)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..755
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51468tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>755
                     /note="ultra-conserved element locus uce-3448"
BASE COUNT          278 a          164 c          102 g          211 t
ORIGIN      
        1 actacactaa caaaatttaa ataaaatact ggtttattga acatccttta tatgaaacag
       61 atttgtacca aaaaggtgtt ggctaaaaag aagaattaag taaatgccat ttgttaacat
      121 ttacagaagt actttgtccc ttacaaccag ctgagttgca tgaaggtgtc agactactac
      181 taacacagaa tcctcaaggc taccttaatg aaaatcagtg taaaaatgaa acttactttc
      241 caataactgg tacaggtatt atacaagaat aaaactgctg aggaactttt aaacctctag
      301 cagattgttg cccacggcac ttacccttga ttttccttca gcatccttaa acagctccac
      361 gtatgtaacc tcaccaacta cataagacat acaaagggaa aataccaaga gacaatgcat
      421 ttaaacacca gtatctttct ttactgtgcc cctgtgcaca agtctacaga gaatcaccta
      481 ttattcacca acaatcaaaa ccagaccaac atacctcctg tcaatggcta tataatttag
      541 ctagttttca gaaatatgca gcagccacat tctcaaaagc taaagacaaa caactatatt
      601 taacctaatt catactacag atcatatttt ggccagtatg atatagttgg tgaacaaatt
      661 cagatataca cagtccctta acctaacaaa tgatcaacgt tcactgaaaa gtgttacatt
      721 tatcatccta ctcacaacac ctgttttaag gtgac
//
LOCUS       KCPA01000471            1014 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 51581tic ultra-conserved element locus
            uce-330, sequence.
ACCESSION   KCPA01000471
VERSION     KCPA01000471.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 1014)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1014)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1014
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51581tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>1014
                     /note="ultra-conserved element locus uce-330"
BASE COUNT          317 a          203 c          177 g          317 t
ORIGIN      
        1 tgttccataa ttataaatct tctgaaactg taactcagga aaagactttt caaataaaat
       61 gtttcccaga aaagagtatt tggcagcggt tggctcttgt tttccctaat aaccattaaa
      121 agtctgccct agtaaaccat tttactgcaa cgtttgaaat ggtagagttt acattttatt
      181 taatgaatag ttgcagagca ttaaagcaac atctcgtcgg caaaacagct ccttatcctc
      241 gctttgtctc aattggtttt tttacatttc attttcaatg acatgtcagc cgtctctcac
      301 caacctcaaa ggaaagttga atgcggggct tacaaagtta agctgacatt tgctctcttc
      361 caataaaaaa tatttagtcc attaaacata aatacctgtc attatgatac atggactggg
      421 tacaagcctc ccgtttccct ctgatgttta ttacatccaa acaactgcag tgcctgcatg
      481 ttttcaactt tagtgtattg attaaacttt taaatggctg ccatataacc cagggacatc
      541 aggaagatta atttgcgtca atgttcatct gtaattcatt agccatttat tctttacaac
      601 cacatgggct atcaagaaaa tgcaggccat ttttcactct gcacaggctt gggaacagat
      661 cctgaaattt gtgctgcata caaataagct ccccaggccc ggccacttaa actgcttggc
      721 ttttcaaaag ttaaagttgg gaataacagc aataaaaaac cagaaatgga caaaatatac
      781 gtcctcaggg tactggggat ttaactgaat ttgtccactg tcttttcatc catggattat
      841 ggtttcttat ttcagtcaga ttataataac tgaaacttgt tactgtgcaa aggccataaa
      901 taaaatgagc tgtacccccc tctaatatct tctaagatgc agttacttgg agaaagctag
      961 aaagcagcag tgaagtataa aagctcatgc ctcaaggagg ttgtagatgt gaat
//
LOCUS       KCPA01000472             550 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 51690tic ultra-conserved element locus
            uce-7636, sequence.
ACCESSION   KCPA01000472
VERSION     KCPA01000472.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 550)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 550)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51690tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>550
                     /note="ultra-conserved element locus uce-7636"
BASE COUNT          155 a          111 c          115 g          169 t
ORIGIN      
        1 agaacaaagc cttctggatt catctatcgc tgggatggga tgtgcaggaa aattgggcac
       61 agtttatttt cggcagaaga tccactatat tcatggcaat ggggtggatg aaaagtgtaa
      121 ggccataagc actacagtat gaagaaattt ttacattcct ctgcttggaa taatgtaggt
      181 ttcctttgta ctgttttcta ccttttgact agatgagggc cagagggcaa ttttctccat
      241 gctcatgtaa tcttgtgccc cctgtgacta aataatggtc attatacaaa ctatattcaa
      301 ttgtataggg ctctgtggct ttatacttag gattactatt ccccacagac aatagtgaga
      361 ataccaggtt aatacagctg tgacctcact gtgctcaatt taagctcagg cctcacaagg
      421 tgagaggctt gtgcatttac ccactgaacc agttaaaaaa ctgatgtgat atctaccaca
      481 tgttgctccc tttttcatga gggaattgct ctgtaccccc cataagagtt tctaaagctc
      541 agtaacaatg
//
LOCUS       KCPA01000473             696 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 51801tic ultra-conserved element locus
            uce-1745, sequence.
ACCESSION   KCPA01000473
VERSION     KCPA01000473.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 696)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 696)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..696
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51801tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>696
                     /note="ultra-conserved element locus uce-1745"
BASE COUNT          235 a          144 c          137 g          180 t
ORIGIN      
        1 gtataaacaa acccaaacaa tatggactta cagacattag cgcggaacaa aagagaggag
       61 gaaaagcaaa gccaactgat caacattaaa aaaataaaag actttgcaag ctcccaaaac
      121 caagcccttc ccagctagaa caacaaagtg cctcatcctg gcacctctcc gtgcttggga
      181 acagtttgta gcaaacagcc cgcgatatga aaatgtattt aatgcaatta ataatttaag
      241 aagtgagagc atgtgctctt ggagagttaa atgcttgtca gagtgataga tgcacgcttc
      301 agcaccaata catttcgtat gaagagcaga gggattttgc aaacttgtgt tgaccttggg
      361 ttgcggtgga gaggaggcag attgcgaagg cacccgcgta cggcgggact gcgtcagctc
      421 gcaatttaca gccctctccc caattaaagg actgtaaaaa cattaaaatt aatgcagtct
      481 taactccaga gcaggctcta ctttcttaat tagtgcataa ttattcagtt tttgatatcc
      541 tggaaaatta tcacatggaa attattttag gcacagtaac aatagcaaaa atctctctgc
      601 ccccccaact cgattaacat gtggaagtaa ttaacacttt attacagtga aaatactatt
      661 actgctaatg tttaatgact tttgccattg catcat
//
LOCUS       KCPA01000474             560 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 51909tic ultra-conserved element locus
            uce-3817, sequence.
ACCESSION   KCPA01000474
VERSION     KCPA01000474.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 560)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 560)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..560
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51909tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>560
                     /note="ultra-conserved element locus uce-3817"
BASE COUNT          159 a           95 c          113 g          193 t
ORIGIN      
        1 aaaattattt atgtagatca ctgatcactc ctctacttcc atgagccttt aattttgctc
       61 tgctgctcgt gtatttaaat gtctaggtta gtgtttattt gtatgactaa ctgcaagggt
      121 ggatgggtaa aagaaaggtg ggatcgtttt ttcctcttct ctctctcact ctctcttttc
      181 taaacaagct aagagttttt ataattcatc acctggctga cagatgagtt ctgctggaga
      241 atattagaaa atgtctcaaa tctcatatat atgctaatgg tatgctgaga ctggttggtg
      301 gtatgccgga gtttttaatc tgtctcgacc agtgtggaaa gtggaggaga caagtcattg
      361 cactcgacaa tttatgatca aacaactgaa ttgtaaagga agaaggacat gcagaaaagg
      421 agagtaattt tctgatttaa cagcgttgtt actacaaata aagaaatctt gattttgact
      481 gcactcgaca ttaaatgagt ttcctgtgcc ctgctctgaa tttttcattt tcagatttgt
      541 ataaagcacc ctgcttagat
//
LOCUS       KCPA01000475             677 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 52018tic ultra-conserved element locus
            uce-2184, sequence.
ACCESSION   KCPA01000475
VERSION     KCPA01000475.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 677)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 677)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..677
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52018tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>677
                     /note="ultra-conserved element locus uce-2184"
BASE COUNT          185 a          153 c          129 g          210 t
ORIGIN      
        1 tctgtctgtc tgcaagtgct atgtcagggt atttgctgta ggtattaggc agttagtcat
       61 ttctgctgct gagccgtcag caatatttct acaacttcaa agcccttaca aagaataata
      121 tcttttggct aattaaatca ggatataatg taacaaatcc ttctcttcct tgagtttctg
      181 ctttcataac ctaatcaggc attttactgg gtgaaacatc tctattaagt ctcatttctc
      241 agccacatga tacaaaaaca ggatgataat tgaggctgca taattgatgt gcgcaatgac
      301 agaatataga aaagggctcc attagccagg tcacatcatt agcatacatt acgttcaaca
      361 agattgctct cttcacctcc tatttattaa tgggttaatc cagtcccatc agcctgaata
      421 catcactgtt taggtctttt cctgtaagat acagcagctc agtttgacat ttgggaagaa
      481 ttgctaccga gggcaataaa attccgtaag tgtcagcact gcagtggtgc tgtttgcaga
      541 agcccttggc tccccaagaa gccaaggatg tcatcaagtc tgcagcacca agtggactcc
      601 tcgagtgatc ccgtctgttt tcaatttcct gtctggatta ccacatttct cagggagcct
      661 ctcccactgt catatta
//
LOCUS       KCPA01000476             624 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 52130tic ultra-conserved element locus
            uce-2853, sequence.
ACCESSION   KCPA01000476
VERSION     KCPA01000476.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 624)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 624)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52130tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>624
                     /note="ultra-conserved element locus uce-2853"
BASE COUNT          182 a          108 c          117 g          217 t
ORIGIN      
        1 aatctgggtt tacagtgaaa acacattttc atctttagca gagggggacc tgcctagcac
       61 aacttagagt gtaggatcat atttaataaa gacatattta gtttgctatt ggaaaaggat
      121 tgctgcagga gataaaaagc tactttttta tagaactttt gcataaatct ggtatccgta
      181 gcctgatcta gtgacataaa tattagcagc ttgtttctat ttcacctgct gtagaaccac
      241 tgctgtccta cagcaataac cagcaaggga atagagctat ttgctgctgt cataaataag
      301 acagggtgtc acagctgttt tcatttgact gagcagtaat ggagttaatt atacttccag
      361 tctctttgtt tttgatctgt gtttccaaag tcatctgagc ttcttgaatt ctcgcaattt
      421 ttttaaccct ttttactact cactggatta gatatttcag gtgatttcac tgtcttatta
      481 gtgttctatg aaaatctcaa acatcaatgt atttagttgt cttgagcaac ataaagagag
      541 tatggtcttt ttgaagacta ggcacataga cttagctagg aaacagatct gttttcatat
      601 ccagcaatgc agataacttg cttt
//
LOCUS       KCPA01000477             714 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 52240tic ultra-conserved element locus
            uce-4231, sequence.
ACCESSION   KCPA01000477
VERSION     KCPA01000477.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 714)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 714)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..714
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52240tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>714
                     /note="ultra-conserved element locus uce-4231"
BASE COUNT          209 a          137 c          146 g          222 t
ORIGIN      
        1 tctgctacgg gaagttttaa aaattcacat tttcttcaga caagcgtggg tcttcctaat
       61 gaaacctggg aacaaggtgc tctcacggaa gctttgaaag tgtgtgcacc gtacttcata
      121 gctgagctgt aacaagactt taaatgagta aatagtgttt agattgaaca tgaaaagagt
      181 cggcatgaaa agacaggttc aaaatattac atgatgcttt gcaaaagtgt aaatgtgcct
      241 gcctttattt ttttcccctc ttggtaaatg gcaaacgttt acaacccaac taaaacagta
      301 ccaagagaaa tcctgtgttt gctctttgga agatattcaa taaattatag tgagctgcaa
      361 atgtcactgg attgggaact gtaagagctt tacctttaag tctttaagta aagacttgca
      421 gctggtgcag tggcttggta atccctaatg ataagctgct tttaatgtgg gggtgaggca
      481 gttttcacac agatattact gcattaacct tactctaggt acagtgcagg tgtgcacaat
      541 attgtgcttt gcagccttcc ctactttatt ctccccgagt ttccgaagcc tgctttaaca
      601 gatcctctta taccatggtg aaaagattgc agttcaagcc tattatcaac aaaaacctgc
      661 caaaagggct acattgtcag actttatgat ggtactaact attctgttgt tctc
//
LOCUS       KCPA01000478             639 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 52350tic ultra-conserved element locus
            uce-5396, sequence.
ACCESSION   KCPA01000478
VERSION     KCPA01000478.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 639)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 639)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..639
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52350tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>639
                     /note="ultra-conserved element locus uce-5396"
BASE COUNT          228 a          112 c          102 g          197 t
ORIGIN      
        1 tttttggcaa tattactagg agatataact tcctttaatt ttgtattcca aacccttcta
       61 attattttta aagttttatg aagtgaaagc tgtcacctaa agatggtaaa cttattactt
      121 aggtttttag aaattaaata tatgtgtatt tttaggaaac agatgtcact catatctttc
      181 ctttaaaacc aggaatgttt aacatatcag cctgttgcat ttgagacgtt aaaatgaaaa
      241 atgacatcta tgcccattaa tatcgtcaat gtataaacag cacagcgtga cacattcttg
      301 agagctgaag gctacaaaat ctctctgaaa cataaataac aaagcactca gaaggatatt
      361 tgatgttgat attcatctct gagaaaaaca ctgctgcctg ggcttcttat gaaaatagat
      421 gcagcccaaa tggatctcct gtaattggtt tcagatagcg aggtcaaaag aaatatgata
      481 caagaaacta ttatgtggaa caggcgaaac aagaatgttt atacaggcac tccctattta
      541 tactgacaag aggtgtacac tctgcagata accaaatcca aaacacttgc caaaagtcaa
      601 ccagaccaaa tccttatttt atttttcaaa agactgcat
//
LOCUS       KCPA01000479             292 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 52454tic ultra-conserved element locus
            uce-4849, sequence.
ACCESSION   KCPA01000479
VERSION     KCPA01000479.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 292)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 292)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52454tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>292
                     /note="ultra-conserved element locus uce-4849"
BASE COUNT           61 a           68 c           57 g          106 t
ORIGIN      
        1 ttttcctcca gcttttctct tcctcctttt tacctccctt tgcagcctct gttcttcatc
       61 cattatttag gcttttctga ctgtaacagc aacattcgcc ttgtatacct tgtgtggggt
      121 ttaaaatata gataaaagca gaaggtcaga cttgaaacac agattctgac ggttgctgct
      181 gactttgtct ggaagctaca aaatctggag ctttctgtgc ccagcaatgg tttcggtaca
      241 attgggtctg gttgatattc ctgcaaactg tcttggtgtt ctttcatcca gc
//
LOCUS       KCPA01000480             679 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 52567tic ultra-conserved element locus
            uce-6931, sequence.
ACCESSION   KCPA01000480
VERSION     KCPA01000480.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 679)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 679)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..679
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52567tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>679
                     /note="ultra-conserved element locus uce-6931"
BASE COUNT          220 a          131 c          115 g          213 t
ORIGIN      
        1 ctgacagacc tttaactata gtggcactac tgggtgcagc tataatatta ccctcataat
       61 tctactatat aataacaaca aaggaaaaaa aaggtgaagg gtcattgtgc tttgtcttta
      121 gaattaagat ggctgtcttc atccttacag catactctta attctggaga cacatcttaa
      181 taacctctaa atagttccaa caaaagagcc gtgtcagagg aatgagcagg ccccaaggtg
      241 tttcaactgg agtgttttca tctgccttta ttgctctatc cctctccaga attaaggcaa
      301 taacctgtga taaattattc aggaactgct acagggatca aagcaaaatc attctgttaa
      361 agtgctgttt gcaacatttg gcacttagtg tgaaaacttt taatgtgtgc aagctgaaaa
      421 tcaacgattt taaataattt aacagcatgg agtttctgca aaccagctaa agatagcatg
      481 ttcctattta actgcttttt cttcatatcc cttttccatg tgtttctagc aaatctgatg
      541 atgtcacaac tataaacaaa gtactacaga gattccagct gcccaggaaa tagattactt
      601 acccacattg tcaggagaaa tcatgacatt cttaggagtt aagcactgtt taaacactgg
      661 aaattttttc tattaatat
//
LOCUS       KCPA01000481             408 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 52673tic ultra-conserved element locus
            uce-1162, sequence.
ACCESSION   KCPA01000481
VERSION     KCPA01000481.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 408)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 408)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52673tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>408
                     /note="ultra-conserved element locus uce-1162"
BASE COUNT          142 a           63 c           65 g          138 t
ORIGIN      
        1 ggagcggatc agaaatggta cagaattttg cacttaattt cctcagttat catttacaat
       61 aagaacctct tggcttgaca gccaagtcta aacagtagta aattagtaca aatttatact
      121 gattttactc taataatcgt aataaaagct tatagatttg gcactaatta cataaatgcc
      181 taatgatctt gaaaattact ctggttagaa atatattact aatctaaact ttgttgttgg
      241 ctggctttga aaaatcagaa cattagaaat ggttcgcttc acttctgcaa agcactttaa
      301 attgttcaag tagtttaaca tattcaagag gaaaaaaagc atttaacttt atttacagct
      361 ttaagttgtg tttgtaggct agccgaactt ggaaacttta cccgtaaa
//
LOCUS       KCPA01000482             394 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 52775tic ultra-conserved element locus
            uce-7151, sequence.
ACCESSION   KCPA01000482
VERSION     KCPA01000482.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 394)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 394)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..394
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52775tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>394
                     /note="ultra-conserved element locus uce-7151"
BASE COUNT          136 a           65 c           63 g          130 t
ORIGIN      
        1 atttgtatac agctgcaggc aatataaaca tggctggtta gaatcattta tatagtataa
       61 gcctttgtac tccatacttc atggaagtta ataagtaggt gtcaaactct gaattaaaat
      121 tcccagaaga ggacacagca caaaggacaa taaaaatgat ttttaaataa tcatagggat
      181 aaatagcatc cacttctgac aaatgtaagt gctggcataa aatgttatta ggctacagag
      241 attttctttt gttcaggaag tatgttttat tctccagcag tgtcattcat catcctaatg
      301 agccctcaaa atgtaaatta aatagcaaag actgattcat tcaaaaacat ctttgtgctg
      361 tgtgttaaac ctttcttcta cttttatcct tata
//
LOCUS       KCPA01000483             612 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 52884tic ultra-conserved element locus
            uce-2785, sequence.
ACCESSION   KCPA01000483
VERSION     KCPA01000483.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 612)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 612)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52884tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>612
                     /note="ultra-conserved element locus uce-2785"
BASE COUNT          217 a           87 c           79 g          229 t
ORIGIN      
        1 tttttaatga aggaattgca cactcatata cagaaatcac gtatttacag catagagcac
       61 ctattgatac attttaactg aatttggaag tcttcataaa gtgagaaata cagcgttttg
      121 ttacacaatt acagctaatt atttttgaaa tacagtttaa atgcaagtta tcttaaattt
      181 attgcttatc tgactggaaa gatctaagca aaacctgaaa atcataaact cttccagaac
      241 attatatttt atgcagtcca aaatgtgaca catggggtct ttaataattc actgcttgtt
      301 aacattaaac aactgttaac atgctcaaat aattagttat gcttgcttga catgtttgca
      361 tctttaataa ttgatgcatt tatcttaatt actaacagta ttatggtcgt aatatgcatc
      421 ttttttctat cttaaaattt taacaaaaac tgactttttg ccaaaaatga ttatcctcta
      481 agttttaatt agtcattgta attaaattgc aagctgcagt attttattaa aaatatcttt
      541 cacaaaaaat atttaatgga aaagaggtga tttgttgttt atgcatcaca cttagtaaat
      601 atttcataag tt
//
LOCUS       KCPA01000484             586 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 52994tic ultra-conserved element locus
            uce-5179, sequence.
ACCESSION   KCPA01000484
VERSION     KCPA01000484.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 586)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 586)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..586
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52994tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>586
                     /note="ultra-conserved element locus uce-5179"
BASE COUNT          169 a          145 c          114 g          158 t
ORIGIN      
        1 tctcatttac agtgagaccc cagagagcag taaatttaca tacacaaagg actagcatca
       61 acccctgaac ctttaatgtt tattttgata gcccaccctg ctggtaaggc cttttgttag
      121 gaagccaggt acaacaaggc aaggatccaa acaaacaaca ctggtagctt tgttgaccag
      181 gtcatatgat gtcctgccct tgaacagtac cccttgtctt tttacccttt gcccctagaa
      241 aatgaagtta gttagagtcc ctgtggcaga tttagcattt cctttcagtg tctgccaatc
      301 tatcaaaatt cagctaccgc tgtgaaccca tcaactcagt gcaaaaaaga acaaggctta
      361 ccacggaccc cctcaaagta gcaatcattt atcccttcct gaactttagc tgacctttgt
      421 aagcacgcta gcagttgaag catgcagcac cttggcgggg acgatcaagg ctgtgggttt
      481 ttcctctccc cactcagccg agcttttatt tcgttccgtc aataagaagg gaaataaact
      541 cttcaacgag aggatgcaat tgaaatataa atactgcatt taggga
//
LOCUS       KCPA01000485             418 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 53104tic ultra-conserved element locus
            uce-2745, sequence.
ACCESSION   KCPA01000485
VERSION     KCPA01000485.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 418)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 418)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53104tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>418
                     /note="ultra-conserved element locus uce-2745"
BASE COUNT          117 a           98 c           89 g          114 t
ORIGIN      
        1 atccctcacc ccggaggagc cccgctcctc ctgatccccc cgccggggtt gggtgtcgga
       61 ggagctgccc gttctgcgga gccggacaat gaggaacgca ttgacaaagt gttcacatta
      121 ttggctgatg ggtctgcatc agtcactcat tcacaagcac aaggtctaaa ttgcagaacc
      181 aattaacggc actaatagcc cttgcctgaa ttaatctttg agacaaaaga ggagagaagt
      241 ggaagagcta ttagcaaatc aagctgtacc atccctgctt tattgcagga atctaagtgt
      301 ctgtatttgg ctattatgaa ctcactgcaa ttacagccct catttaaaat gattaagtgg
      361 ttataattat ttttcaatta aaacttagat cttccattta tacaacattg caggcttc
//
LOCUS       KCPA01000486             505 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 53211tic ultra-conserved element locus
            uce-5588, sequence.
ACCESSION   KCPA01000486
VERSION     KCPA01000486.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 505)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 505)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53211tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>505
                     /note="ultra-conserved element locus uce-5588"
BASE COUNT          140 a           80 c           85 g          200 t
ORIGIN      
        1 ttttctttaa gttaatggta gtccaacatt aaaactttat cttttaaagg ctagcattaa
       61 atttaggttt gcttcctaat tctttttgct tcttcactac gacccaaaga cttcttttaa
      121 tagacattag ttaaggcctg gaattgagta gacatttgtg gacttgaaat ttggaacaga
      181 attgtccttt atagtttttc catggaggaa aaaaatcttc ttatgagaat aaagacttta
      241 gcctaatctc ttgccatctg gaaaatgtag aagccagagg ttgttggcac caggtcacat
      301 cccttatgta aactgtcaaa ttcttttcat attaatggca tatcaagtta aacccatgag
      361 gtttgtcatt ggccagattt attgatttct ttcttatttt ttaattttga ttctgtccta
      421 tttacttgat agtgttttgt ggttaacatt gatcatctca atttagtgca acatttctta
      481 gtctttccta gtaggggatg attag
//
LOCUS       KCPA01000487             508 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 53314tic ultra-conserved element locus
            uce-3352, sequence.
ACCESSION   KCPA01000487
VERSION     KCPA01000487.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 508)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 508)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53314tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>508
                     /note="ultra-conserved element locus uce-3352"
BASE COUNT          121 a          130 c          101 g          156 t
ORIGIN      
        1 agaatcgtta cattccagtt atccaccagg aaaattcgac tgaagggcag ctttaagcga
       61 gccaaggtag caggcaaacc tgcactccct tccccacccc gcaggacagg tagtctttga
      121 agactgtgga aatgtgcagg tgtttatttc agcaaaagct gcagtgatgt gtaaaaagag
      181 agggaaggga tctcccagct tggcctctgt ataatgccat ttgaatcttt tttgtttggt
      241 ggtaagtttt aatagttatc ctttgaggat tttccctgcg agcttatctg aatacaccaa
      301 cagtcttttt tgtaatattc gcatttcccc tttggttcag ccgagcccac tgacagatca
      361 ttcaaattca attgttttat gtctaagccg aacagctaat taaagtaggg atgattaacc
      421 tgactggcag tgtcgctctc tctccctcgc tctctcgctc cctccctccc tccctccctc
      481 ctgttccaat cagtcttttt ctcacact
//
LOCUS       KCPA01000488             575 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 53417tic ultra-conserved element locus
            uce-7469, sequence.
ACCESSION   KCPA01000488
VERSION     KCPA01000488.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 575)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 575)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53417tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>575
                     /note="ultra-conserved element locus uce-7469"
BASE COUNT          180 a          100 c          124 g          171 t
ORIGIN      
        1 gaatagaagg gaatgcaatc taagttctaa taaaatatcc cagggctggt gcttctcttt
       61 tgacaggctg tgctgatccc atggagtagt gatgctctag aaggtgagta aatgcatgtc
      121 aggacaagga tgatttaaga ttaccccact tctgcatgag attggatcta ttgtaacctt
      181 cctaaacctt tgttaccttt gtaatttaaa ctgacacgtt aaatgctaat gcaattgatg
      241 ggggtgaaca agtggtcaag gaacaacctg atcagactac ataatgcatc agagaattgc
      301 aaaaatatgc aggtcagata taattttgac agaaaatggc tcgctgcaag ggtttatgtt
      361 tccctggatg gtcttaaaaa gagttggact atggtaagta ccacagccct tgtaccaagt
      421 gaaacttgat ggtccaagtt ctcaatatcc tcagatttca ttatcagttt ttattggagc
      481 tgggataata agattataga attaggagaa aagttatact cattttcttc agctcagcag
      541 ccctaatgtg caaaaggagt gacactcatt tctca
//
LOCUS       KCPA01000489             573 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 53524tic ultra-conserved element locus
            uce-790, sequence.
ACCESSION   KCPA01000489
VERSION     KCPA01000489.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 573)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 573)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53524tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>573
                     /note="ultra-conserved element locus uce-790"
BASE COUNT          186 a           89 c          116 g          182 t
ORIGIN      
        1 aggaaggagt taagcaagat gagctccctt taaaatgagt tagttttgta taactgcagg
       61 taaaccagtg gttaacctgg ctggaaactg ctgaagaaga agaatctgaa gaagaagctg
      121 actaaagaac cagccaaagc cttaaattgt gcaaacatac tgttgctatg atgtaactgc
      181 atttgaccta accactgcga aaattcattc cgctgtaatg tttcacaata tttaaagcag
      241 aagtatgtca gtaggatatc ctctgcaaaa ggtttttgta gtatgtctta atagtctaca
      301 ataaaaatat tttagagtat cttcaatgtt tagataacag tgtattagca gcatgcaata
      361 attacatcat aagttctcga gcaggttgca agggtcttct ttgctgccag ttatcatagg
      421 ctgtttttaa gttagaaact gaatagcaac actgaatact gtagaaatgc actttgctca
      481 gtgtaatact tgagttgttg caatatttga ttatccattt ggttgttaca gagaatcctt
      541 aactgtaatc gatggttgtt gccgtaatag tat
//
LOCUS       KCPA01000490             618 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 53634tic ultra-conserved element locus
            uce-4176, sequence.
ACCESSION   KCPA01000490
VERSION     KCPA01000490.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 618)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 618)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..618
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53634tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>618
                     /note="ultra-conserved element locus uce-4176"
BASE COUNT          190 a          158 c           93 g          177 t
ORIGIN      
        1 tttcagcatt atcgttaaac caacaacaaa taatgccgct cttcacttcc acgacactcc
       61 acattcagca cacaccgagg gtctccccct ctgaaaagag cccatttgtt taaaaacaaa
      121 caggaaacaa aacaaactta cctgctgttg ttgcagatgc agcagttcta ctgtgcttac
      181 ttcagtgctc gtgtcaccac ttgatcttcc atctctgctg ccagcatcta attggctgct
      241 tagagtgctc attccatttt gattcattga actgttgctt attgtctctg tcgcagattc
      301 ctgcatcatg acttaatacc taaaagtgat taagaagtat caattaacac acgcgttaca
      361 ccttcacact tccattagca agatgtccct ctctgccaat tacacagaca gcatctttag
      421 aagaagaaaa aagcctcgca gagccgttta ccaagaaaaa ctctgctttc atacagctgc
      481 taatcactgg aattatgatt tctataagca agctttgtat gcttacattt aacggccaaa
      541 ataacacacc atgcacacag catggtcaat agcatttatg aacgactacg ttttaaagtc
      601 tacctataaa accagttt
//
LOCUS       KCPA01000491             748 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 53740tic ultra-conserved element locus
            uce-5277, sequence.
ACCESSION   KCPA01000491
VERSION     KCPA01000491.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 748)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 748)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..748
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53740tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>748
                     /note="ultra-conserved element locus uce-5277"
BASE COUNT          224 a          127 c          139 g          258 t
ORIGIN      
        1 ggtgattcta cctggcaggc tgttccagtg tttgctcaga gtaattcagt ttcaagttta
       61 tgcagtagag aggcaaacca gactcctagc aggagcaaat tggtatttgt ctggacagca
      121 gaagatccac atctcactca agaagtgagt ctatacaatg gctgggctga tcatttcctt
      181 aggttttaga gaaattttaa ctttgcagac ttcatggttg cttgatctca ctacagtaaa
      241 cagctccata tttttccttt tcatgtttta tcctgaagca acagagcatt acattaattg
      301 acttgtctta ttaattcaat aagctgcttc caagatgaaa tgcttagcta tgcttgcttg
      361 tttttggcac tttttggttg ttggaagaaa agctttaagg ctagaattgc tctgatgttt
      421 tccacagttc actgaataat tttatgcact actgaagatt tgccacattt ggaattactg
      481 caaactgcta ctttttcatc atattataat ttaattcaca cttttagtat gataagaaaa
      541 catttaacag tttgcctatt tgagaagtat atttgtcctg ccataaagtt gtggttaaga
      601 attcattatg ggtcactcat ttctaggatt tgtaatttgg gcttaagata catttaaaag
      661 attaaagatg acatagaagc caccccattc aaatgaatta tatgcaagaa atccggagaa
      721 aaaattgacc ttgctgtaaa tatagggc
//
LOCUS       KCPA01000492             797 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 53852tic ultra-conserved element locus
            uce-3863, sequence.
ACCESSION   KCPA01000492
VERSION     KCPA01000492.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 797)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 797)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..797
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53852tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>797
                     /note="ultra-conserved element locus uce-3863"
BASE COUNT          298 a          138 c          158 g          203 t
ORIGIN      
        1 tttacttatt tatgctttga tgaactgcta attgacttca tctctgaggt cacataaggt
       61 cataagaaaa taaactgagt caagtgcttc agccagatca gtttatacag agcaaccaga
      121 cttcctgctg cttatgagtt catcaaaaat tgctcactta aaagcccacc tgggacagag
      181 atttggaaag aactagctgg agcactgttg tctcagcatt tccacatgca aagagcaaaa
      241 aaattaaaga aaatagagtg gatataaaca gtactgtata ttgagttaat acagcccttg
      301 tatggaagtt ataccctcca gtgaccttct agaattgtat cagcttgcta catgcatgtc
      361 ttcagagtcc aaacatgtgt gaaagagacc attcgtctac agaaggatgg atttcgtttt
      421 gttgtcgctg gaaccgggac agcagacatg tatatttgcc acattgtaaa taaaattact
      481 tcaacagaaa tcacataaag tacaaaagct ttgaaagtcc agggtaaaat ttaccatcag
      541 gcaaaggatg agatcttcca cacatgcttt tggtgcccag gcacgagcca aaagcagtgc
      601 aaaaaaagct tttacatgaa aaattaataa aaatcaggtg tgttcatgat gattacttaa
      661 aaagaaagaa aagatgattc agaaaaaggg gcatcctgcc aaacatatta gagatataaa
      721 ccatggaatt ggaaaaaggg ggtaaaagaa agatggactg tgataaaata caaaagaaca
      781 aatacaaaca gatggac
//
LOCUS       KCPA01000493             561 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 53959tic ultra-conserved element locus
            uce-2705, sequence.
ACCESSION   KCPA01000493
VERSION     KCPA01000493.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 561)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 561)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53959tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>561
                     /note="ultra-conserved element locus uce-2705"
BASE COUNT          174 a          110 c          104 g          173 t
ORIGIN      
        1 atgaagacat cagcaagtac atctttctta gacacccagg caggcaaaca tctctgaaac
       61 acgggggcat gaaactgctg ccgcagcatc catcatcctg tgaaggacag tgaaaacaag
      121 tgctgtcatc tttgacattt taattgaaaa gaaagcttac acagatttcg accttaagca
      181 gtatgtttat acaagtgtat acagagaaat aatctgtcag ttcagtgcag gctcattgct
      241 ataggagttg gtttagtggc tgaacaatcc aacattagct cacacacctt gccttgttcc
      301 atgcctcaat aatttttagt agaaatactt tgcctagagg catgcagtta ttaaaaaaga
      361 ggctcagctt gcttaaagtc tggaattatt agctcatggt aacaagcctg cactggagaa
      421 actgttggtt ctttgttttc ataactttgc tgtaattcac catcttattt tcagagacaa
      481 acttctgcat tgtttgggaa gaaatcactt caaaaagatt tacaaagctc ttttatctta
      541 gtatttctat taaattgcac t
//
LOCUS       KCPA01000494             724 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 54065tic ultra-conserved element locus
            uce-2771, sequence.
ACCESSION   KCPA01000494
VERSION     KCPA01000494.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 724)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 724)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..724
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54065tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>724
                     /note="ultra-conserved element locus uce-2771"
BASE COUNT          257 a          123 c          130 g          214 t
ORIGIN      
        1 gtgctaaatt agaccattaa acactgcaaa gccaatggtg cactgaaatg ctcccacagc
       61 cttgtaattt atactatgtt acacagggta gagtaagtag ctcatgggtc tcattggatg
      121 acttaacagt acattttcac ataattaaag tggacacagc ttagaaaaat taaaaggcta
      181 ggatataaag ctcagctgca aataatatta aatggcatta tcaataacag agatcccagg
      241 gtttgcatat taattgtaag aaggtgctaa tttgagtgtt ttaagcttgc attcacaagc
      301 ttgtttacat gctttgttcc acctggacct gtttggaggt ttgtcaaaaa cctaacaagc
      361 agaaaaagat tgcatttgaa aatacacata catgtttaat taagccaggg ccaccgaaca
      421 ttcctcaata tatttagctg ttgagattta agcaccacca gagcatcagg cattatcacc
      481 ttttgaagta ctgcagaatc tttaatattt aaagcacaaa gcagacttta atataaaatt
      541 ctagcagacc acagaagatt aaagacgcat tataaatgtg acagtttgta aatggaacac
      601 cagtattaaa gggaaccccc ctgatatttt atagcatatt tttcaggtgt atactaaatt
      661 ataaatacaa ttaaatagca gtaattattc tctggaaggg gatggcagtt taactgttct
      721 agaa
//
LOCUS       KCPA01000495             769 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 54175tic ultra-conserved element locus
            uce-257, sequence.
ACCESSION   KCPA01000495
VERSION     KCPA01000495.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 769)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 769)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..769
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54175tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>769
                     /note="ultra-conserved element locus uce-257"
BASE COUNT          255 a          121 c          138 g          255 t
ORIGIN      
        1 tttctattta aatgtttttt gactgttcag cttcagttaa accttttact gatatgcaaa
       61 caagaaaagt actttaacag acatctgcat ttgtaaccaa attaacatca aaattttgaa
      121 ttaagaaaat gtattgacat caaaaaaagg cttcctttaa caacagattt ctaacataat
      181 acacattgat ttcagtccaa cttttagatg tgataaaaaa ttagaacatt gttataatta
      241 gttcagggag aactcagaag taaacttact taatttattt gcataaattg ccattctgtt
      301 atctttaaaa gcaaatgcaa attggctctg tctgatatga tgatggttat ttggctcgaa
      361 agtgcttcaa tttgcgtagc aatctggtgt cgtctctgca gtgaggcgat cccaggtaac
      421 atacaaatcc tgaattattc cagaaattag tatgtttaaa gcatcaattt aagtgctaat
      481 tgcagtagta atgagaaaaa gcagtactac tgtgagattt gcatctactg ccccatcagt
      541 atgcctggaa cggctgctga ctggcagagg atttggctgc taattaaata attgtatgca
      601 tggcagtgtt ctcgtctgat tcaatagatg aagattaatc ctcagataaa tatgtttggc
      661 tggtattgaa atgtcttagc agtttcttca aaaaatgtgt acattcacac tgtgagtgac
      721 tctatgcctc atatgtttgt aaatacagat gcatatagga gggaaaaac
//
LOCUS       KCPA01000496             567 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 54284tic ultra-conserved element locus
            uce-4265, sequence.
ACCESSION   KCPA01000496
VERSION     KCPA01000496.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 567)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 567)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54284tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>567
                     /note="ultra-conserved element locus uce-4265"
BASE COUNT          183 a           98 c          105 g          181 t
ORIGIN      
        1 atttgattat gttgcagttt acatgtatac taaggccaga aactgtgaag atgatacctg
       61 cttaaaagga cccgggagat caggcaaact ttgacagggg aaacagaatt gtgcagtcca
      121 gtgaagaatt aaactactgg gagtaataat atgggctgat gcactcaata tagcagtaat
      181 gccctccgag aagggtagga aataattcag ttcctctagg ctgcacagaa gctaaataca
      241 gtatgacaag aaatagtagc agtactcatt atgtctgatt gctaattacc cctttgaatg
      301 attcggttat gcctgctact agataattag tttagtaatt tatggctgca gcacaaacta
      361 gtattttaat tttcactgaa cagttttcac aacacctaca gttcagatta tatctctctt
      421 tttactcaat ttcaaattgc tttttttgat aactgatgga gaaacctagc aattattgct
      481 atttcccagc ctggctttaa tggtaaattg ctttttatgt aactgtattc aaatgtaaat
      541 tatataaata aaccagctct acctgag
//
LOCUS       KCPA01000497             525 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 54389tic ultra-conserved element locus
            uce-7866, sequence.
ACCESSION   KCPA01000497
VERSION     KCPA01000497.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 525)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 525)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54389tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>525
                     /note="ultra-conserved element locus uce-7866"
BASE COUNT          153 a           90 c           97 g          185 t
ORIGIN      
        1 tttttgcttg tcctttttct ggtctcttga gtgatttaaa ttaaatattt gaaatagctt
       61 ccattgcaat actcactttt ttttactgac atgctctgta atgtatgtaa aaggtcacac
      121 gtatgatgtg atgaaaagca gatagcttta caatgtcttc atttttagca gaagcagtcc
      181 tgcgccagct gtaacagcag catctgtgac caacacacag gcttctgaag tcactgtgcc
      241 acaaataaat tccagtgaaa gctcaggggg taaggaaata gcatattgtt tctattgaat
      301 ttataaggca gcttccagct tcagtcttct agactttact taacacatgt aatgtgttct
      361 ccttcaaaca tgtagtttaa tttcagaaaa tcactgctgc gatgtcttta gttctcagaa
      421 caatagcagt agtgttccag tgactgtagg tctgtagttt ggttagataa atgagatatc
      481 taaagctgga agaacaatat ttatttttaa ttcattttgt agtta
//
LOCUS       KCPA01000498             626 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 54500tic ultra-conserved element locus
            uce-4707, sequence.
ACCESSION   KCPA01000498
VERSION     KCPA01000498.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 626)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 626)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..626
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54500tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>626
                     /note="ultra-conserved element locus uce-4707"
BASE COUNT          179 a          152 c          141 g          154 t
ORIGIN      
        1 tggaagcctc ccttctgact gcagctccag acccaagcgt gtggccccgg ctgcctgggg
       61 caccaggcag agcagggacc aagggtggct caagctccac caccgagtaa ggccagcagc
      121 ctgtgctgag aggctgagtc attattttat taacagggcc cacaactact ttaatgtggg
      181 cttaggctgc aaaaacaaaa acatacataa aagcatttgg aattacttca taaaatacta
      241 aatcacgata ttaaccgact gacctttgct ctatgcagac ctgctaattt tagcaattac
      301 agccaacaac ttgaacatat caagtgggca actgtttaac aataatgaca tctgcttgga
      361 aaatcaaatt aagtctaaac atctttaaat ccccactagg ggatacctgc gcaactgtta
      421 gtccctgttt aataggattt taaacccaca gccggctgca cactgtggtg gcagtgggag
      481 tgacaacaac aggacagaca tcccattaag cagagaatgc ccttggacag tgatggaagt
      541 ggtttgggtt ttgacagctt aatctgatag atgggtgcat tagctggatc cctttgcttg
      601 cccgtccctg cagatattgc tcccct
//
LOCUS       KCPA01000499             602 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 54607tic ultra-conserved element locus
            uce-696, sequence.
ACCESSION   KCPA01000499
VERSION     KCPA01000499.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 602)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 602)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..602
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54607tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>602
                     /note="ultra-conserved element locus uce-696"
BASE COUNT          230 a           92 c           85 g          195 t
ORIGIN      
        1 gtatgtacat tggtgtctag gtagtaggag gcaaaaataa ctaaaaagaa gagagacata
       61 tctctagtct aaacaaaaca gtgtattttt aattgaaata acattcagtg gaactgaaca
      121 tcaaaacatt taactttttc aaagttttcc gcattaaaga attaagatga aacacaatta
      181 ggaaacagaa aactgcaaca ttgtagagga tggtcacttt ttgtatgtca tgtggcttta
      241 aaaacaagtc agataaatga tgatgccatt aaaactgaac taattaaaga aagcttcttt
      301 taagaactca ttaactgcaa cctcatttgc ataatgatgc atattaatta agttttaatg
      361 aatctgaatt tgcaccaagc ctattcatgt tggctttgaa acaaattgaa caaattagtt
      421 aaaagctttt tggaatctac ttttcacacc aaacaggata tgaatgcaat catctccaca
      481 aaaaagaaat atttttcttt taatttaatt caaaggtatg cagacccatc tattaattat
      541 ttttaaatgc aataatttcc accttttctt tgcaaaatca acagtattac tcattcttga
      601 gc
//
LOCUS       KCPA01000500             457 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 54714tic ultra-conserved element locus
            uce-2352, sequence.
ACCESSION   KCPA01000500
VERSION     KCPA01000500.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 457)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 457)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..457
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54714tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>457
                     /note="ultra-conserved element locus uce-2352"
BASE COUNT          109 a           83 c          104 g          161 t
ORIGIN      
        1 cttgtcacct cgtgttgggg accacactaa ggctggggac agaggttgca gcccaggatc
       61 tcacccagcc ctccctgggc attagccctg ctttggctct tgtataaata tctgctgcat
      121 ttccaccagg agttattgct gttatatatt ttacagacac tttactgtca tctaagtggt
      181 ttattttatt cccacagcta ggagaaaact acaaaaggaa ttttgtaatc tgaatgtgat
      241 tgtgggcaga gagtaatgtt ttgaaaagga gctgagagta aattatatca gtgctttatt
      301 gtgtttaagg agacttttct attgtgctag gagttaacat tagttctcaa agttattaac
      361 tggatgtggt tttattatga ctgtgtgttt tgtcaatata tggctttttt tgttaggctt
      421 ttcggtgcca gttcggctgc aactttggca ccctcca
//
LOCUS       KCPA01000501             609 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 54822tic ultra-conserved element locus
            uce-3825, sequence.
ACCESSION   KCPA01000501
VERSION     KCPA01000501.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 609)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 609)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54822tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>609
                     /note="ultra-conserved element locus uce-3825"
BASE COUNT          166 a          124 c          138 g          181 t
ORIGIN      
        1 gtatttctct acacaagtgc ttttgaaata aggaaaaatg gggggaaatt gcagtgggct
       61 tagcagacaa aattgagcag ttgactgtgg caaggcatac agtacttaaa tgcaagagct
      121 gatctaatcg ttgttctcga ggaagctttt tgctgcattt tagcacacaa agcttttcgt
      181 tttctctttt gtggcttgag ctgctattta agaaagcaaa aatcaataaa cctttccagc
      241 tttcaatctt ttgccccaaa aggtgttttt ttgggtagtg ttttgtcatt cataagctgt
      301 ggcgacaaat ccttgacatc attcgtggat aatatcgatc agctcttccg ttgcgccaaa
      361 ggacaaatag aaatcattta tctgtctgga ctccaaaaca gcaaaagaca aagggctctg
      421 ccagccaccc atgacaatca gcagctgaag gtattaccag ggggtcaagt tcagaggtca
      481 gtggtcaaac aggttgtcat cagtttctca caggcagcag agtggtttta cttgccaaac
      541 cctggagcct gatgggtgct ggtttgggtt aatttcctgt aaatttgggg tcttaactcc
      601 accttcccc
//
LOCUS       KCPA01000502             611 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 54933tic ultra-conserved element locus
            uce-2971, sequence.
ACCESSION   KCPA01000502
VERSION     KCPA01000502.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 611)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 611)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..611
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54933tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>611
                     /note="ultra-conserved element locus uce-2971"
BASE COUNT          179 a          127 c          115 g          190 t
ORIGIN      
        1 gggagctccc aaatgttcaa ttcctctgaa aatctggcta gaagttacag ttttaaaggg
       61 aattgtcatg gttatctaaa ggttatgcag tatgcatctg gcttgctgaa ctttcaaaaa
      121 tccttcaaaa gataatgtat ttaattttta aatagagagt ttacatgtcc aacagaaagg
      181 tgttagaaat attttgttaa atgtgacatt gtccctttaa ctgcagaatc tatagctgct
      241 gtagccatgg taaaataact gtaccaggtg tgcacgtcta aataaggtga ctattctaca
      301 atctttagga agaggaagta gtcccacctc gtcctccact ccctcggtcc tatgacttta
      361 cagagcatcc tcccataatc ccccctctgc ccagtgatag cagctccttg ctctgttata
      421 gcaggggccc agtacatctg acagaagaaa agaagatgta ccaagttcaa ggatatcaga
      481 gaaatggatc ttactgtgta agtggcttaa actgccacgt tgttctagct gcatcatttg
      541 ctcttcccat tttatgttct gtgcaaaatg tcttaagact taaaaaactt agattcttct
      601 cctcactagt t
//
LOCUS       KCPA01000503             429 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 55043tic ultra-conserved element locus
            uce-4598, sequence.
ACCESSION   KCPA01000503
VERSION     KCPA01000503.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 429)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 429)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="55043tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>429
                     /note="ultra-conserved element locus uce-4598"
BASE COUNT          115 a          104 c           91 g          119 t
ORIGIN      
        1 cccttgctgc tgcaaaatgt caccaattta ctttagcctg ggggcccatt tcgagtttta
       61 ccaccaatat atgagaaatg catttttcaa gctgttacca cttaactgta ctgatatcag
      121 ccactcaggg gacacaatat tgtttacaca tcctgctcta tggaataagc acggatgcca
      181 aaactctgcc tgggttgtga aggagacgtt tactctctgt tttatgagat ttcctcgatt
      241 tgtggctgcc tcaatggtcg taaaaacagc tgtaaatcaa aagagcacca caaaattgca
      301 gtaacaactg tcgaactcgg ctctaaaaag cataactccc agcaccagaa ggtggatggc
      361 tgatttaata ccaggtgtgg gggagcccta cactgtgtct gcctatgttg gctgctcccc
      421 tgtcgctca
//
LOCUS       KCPA01000504             496 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 55149tic ultra-conserved element locus
            uce-6521, sequence.
ACCESSION   KCPA01000504
VERSION     KCPA01000504.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 496)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 496)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="55149tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>496
                     /note="ultra-conserved element locus uce-6521"
BASE COUNT          142 a          107 c           95 g          152 t
ORIGIN      
        1 ggatgtcatg tggacagact actgaggaac cctgccatgt taccagggag gcaagctgct
       61 cccaactttg ttataaattt atgaagcaga agtcctgaca cggaaaccca agatgaagtc
      121 aactctgtca agtggatatt tttctcatta ttcaacactt aacagggatg acaagattaa
      181 atagtcactc atcttctgtg ccattatacc tcctgcatga ttgcttcaaa ttaaatctaa
      241 cagtcaatga aatagtcaat atttaattta ctcattgcag gtggcgattt agctccagtt
      301 acgatatcat ttagtgacag aaatattggt atttatcttt ttatgactct tcagaaaatg
      361 cccacgcagc tttaagtcat acgtcactct cgtgtgggtt ttgaacatca ggggccagtt
      421 ccttttccct gctttcctgg gcagtgaaga cacacaagag gacttgagtt tcccaactat
      481 tcttctagga gcatcc
//
LOCUS       KCPA01000505             467 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 55253tic ultra-conserved element locus
            uce-5830, sequence.
ACCESSION   KCPA01000505
VERSION     KCPA01000505.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 467)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 467)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="55253tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>467
                     /note="ultra-conserved element locus uce-5830"
BASE COUNT          125 a           92 c          101 g          149 t
ORIGIN      
        1 tctaatcagg agtcatcaag acctataatt agcagggttg ttcagactca ttgctttctc
       61 tttaatggcc ataggacatc caaatggttt taaattatgt accatgggct cctaatcagt
      121 ttattgaaca tcataaattg ttaaaaggag ttaatagctt gtgttccttg gtagaaagtg
      181 ctaatactcg aggcagagaa ctcatcaaat gaacctcgtt agagagggga ggagggagat
      241 tgcgcctcag tgtctcattt tgttttagta attagctttt actggattat ccgatccaaa
      301 tctttattca gtttactctg tcaaatctag tttgcatttt aaatggaaaa ttgacacgtg
      361 gaacaatttg tctcctgact gggttaacgg gtccactggc aggaggctcc tgcggggggg
      421 ttatcaccaa agccattttc cccaacactt gatgtcctct ggcctcc
//
LOCUS       KCPA01000506             633 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 55365tic ultra-conserved element locus
            uce-744, sequence.
ACCESSION   KCPA01000506
VERSION     KCPA01000506.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 633)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 633)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="55365tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>633
                     /note="ultra-conserved element locus uce-744"
BASE COUNT          194 a          116 c          126 g          197 t
ORIGIN      
        1 ccaacttttg gactccttgt gatctagcac atggagcctc aaacgtaatc agaaaatgcc
       61 gtgtgaaaat gaggactgct gggttaaatt ccagctactc tgaacttgtt cctcgctgct
      121 cgagccctga gcttcctggt cgtaggactc tgtgtgtagt ctgaattgat ttctgagccc
      181 agctaaggga aagagttaag cttgttctcc ctttctagtt ggcagaaagt ttgcagttta
      241 aaattacata ctgactctgg tgtagagaca caagaaatta tagagcagac actgtccagg
      301 acaacgtata atttaaaatg tactaaagaa tgtataccac atggcaaagt aagtgaagtg
      361 cttcttcaaa tataagtgtt ttgcatagaa aggctgtaat tatccactcc tagggaaatg
      421 tttgcattca ttctaaatca atatttacta ttcatctctt gtgttcagca aaacaaggat
      481 ttaacatttt tttgttttaa tgaggtacta agactacaat aatactacaa cgtaattgtc
      541 ttgatacaga atattgctaa attgcgttgc tatttcagga gcaaacaggg ggtgtccctg
      601 tttagatgtt actgcagtaa cacacaattc aaa
//
LOCUS       KCPA01000507             445 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 55476tic ultra-conserved element locus
            uce-2172, sequence.
ACCESSION   KCPA01000507
VERSION     KCPA01000507.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 445)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 445)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="55476tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>445
                     /note="ultra-conserved element locus uce-2172"
BASE COUNT          141 a           76 c          112 g          116 t
ORIGIN      
        1 ttttcataca aaagcccagc gcagaatgac atttgggcag gcaggctgtt tctgcggaac
       61 agcaagagcc aaaaggcctt gtgtcaccca gttatgtaag acacaatctc gcctgaaaat
      121 gcacaatgaa tcgggaagga tttatgtaat taattgacca gtcttaacct gttatcgtga
      181 tgtaaggaat ttggaactca ttaatttggg ccctgacaga tttcatatta gagctggcaa
      241 atatggattg agcctcttat tcttgtagca gctggaattt ccgtgacagt gaggattagt
      301 gaagaagacc tattgctcaa gtcaaactgc ctcttttgta atcagcagcc ctgctctgca
      361 ttaaaggggt aataggaaag tggaaaaaaa aagagaaatg tattcatgta tggagcagag
      421 caagggaggg agaagaggga tgtat
//
LOCUS       KCPA01000508             483 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 55690tic ultra-conserved element locus
            uce-6391, sequence.
ACCESSION   KCPA01000508
VERSION     KCPA01000508.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 483)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 483)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="55690tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>483
                     /note="ultra-conserved element locus uce-6391"
BASE COUNT          156 a           86 c           83 g          158 t
ORIGIN      
        1 tttctatgag caggcaaatc ccaatccaaa tgtcctttga tgtactgtac ttaatagcct
       61 ggtgactcct tggattagac tgatcgagtc agtgatgaat agggtaagta tagttaacag
      121 ccattcttaa acaactttga gtgtcattaa ttttgttata ggacagatta atctgaaatg
      181 tcaggacttg ctgtactaga cctaaaattg tattttcaaa ccaattttaa cagattgtat
      241 ttcactcttg acacaaaatt catttactcg ccttagattg cagcttttat tgtaattgta
      301 tcaaattaaa tcaggtcatt agaaccacag aaaactaaga taggaggata cttgccctac
      361 cttctatttt ccttttaatg catttttctc cataaagcaa gcctgaatac atggacattg
      421 ctacaggtta atgagggaaa cagacttttg aaatcatatg taaatcatgg ccagacagag
      481 gac
//
LOCUS       KCPA01000509             390 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 55899tic ultra-conserved element locus
            uce-5664, sequence.
ACCESSION   KCPA01000509
VERSION     KCPA01000509.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 390)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 390)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="55899tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>390
                     /note="ultra-conserved element locus uce-5664"
BASE COUNT          136 a           71 c           77 g          106 t
ORIGIN      
        1 aaaagacatt cagctctcat cctctgaaat tctctgaaat tcccagtggg ttaaaggttt
       61 cagagggtgg ggaaagataa aggtctactt ctatgtgtat tatctattaa gaaagtgcaa
      121 gagaggaaac tttgaatttg gagaacaaac agtaatgagt ccagcatttt acatcttcaa
      181 agagcaaagc agggtctgcg agcaattaaa gttctgggac attaatatct tctgaccctg
      241 cggaaaaggg caatcaaatt ccaatcacgt ctaagaaaca tctggacaaa tttgagcaaa
      301 tgatttttca aacctccata tatttcttta aattacactg tcatcggagg caagccacat
      361 cccagagcat gaaataaatg aaagctgttt
//
LOCUS       KCPA01000510             735 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 56007tic ultra-conserved element locus
            uce-77, sequence.
ACCESSION   KCPA01000510
VERSION     KCPA01000510.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 735)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 735)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..735
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="56007tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>735
                     /note="ultra-conserved element locus uce-77"
BASE COUNT          258 a          167 c          107 g          203 t
ORIGIN      
        1 actaattttt gagccaaatt atataaatct atgtattagt aggtacatac actacagttt
       61 aaaataaact taacatgctt ttataacacc ttgcaacacc agtatttaat atatatgact
      121 accaacgttc ttgcagaact tacctgcagt cagaattcat tagtaacttt gatgagcagc
      181 agtctacttg tctactctat atttgacagc atatcacagt ctactttcac attaaatcag
      241 catctaaacc accagtgtgt actgtcactc cacagcaaac tacttattac aaagaaaaaa
      301 ggtgcaaaat tacctctgga tgagcctagc ctggaaagtg atgagcgccg aaaggatgga
      361 taaccaaagt aactaatatc ttctgaaaac atagcatcag catcaataat gacacttggg
      421 tgagcagaat gtatgtcagc atccagaaga gacataagat cctctataag aggagacaag
      481 ggtcttaagt gaataatcag ctacttaaaa catcagctag agagaccatc aactaaactc
      541 ctatctatta attgaatttc tgctcttcag attcaccagt gcaaactcat gtgcctccta
      601 tgcaaccaca tttacaatca agcttggtga aaaccagctt ccctgcaaga actgctctgt
      661 cacttaccta accacatttc ccaaacaaga ctttcccaaa actcccagaa attcaaactt
      721 ttgactgtca cttca
//
LOCUS       KCPA01000511             513 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 56117tic ultra-conserved element locus
            uce-401, sequence.
ACCESSION   KCPA01000511
VERSION     KCPA01000511.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 513)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 513)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="56117tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>513
                     /note="ultra-conserved element locus uce-401"
BASE COUNT          150 a           89 c          132 g          142 t
ORIGIN      
        1 aaaaaagcag aggtgttttt aagatgctga tttttaaaaa tgctgcccac ccttttaacc
       61 ctccaagata tcagataagt ttctctttcc tgcggggaga tgaagtggct gtcattatct
      121 ggaagggctg tatcatatcg gaatctgccg gcgcaggtca gcgagtccgg gctgttctgg
      181 gcccggctcc ggcactgaat tacatttcct gggcacaaag gctgcagaat gggtgggtgc
      241 tttgtcattt aaactgcata aagaggcaga aattgatttt tattgtggat cttcatatct
      301 aataaagctc tgaggggctc ttttcttctc cgattgaatg gccattgaat gctttcaatc
      361 tagttctgtg tttcatgcct aaactgaata gtggcaggag gaaaatagac ggggggaaga
      421 gaggccaagt cactttccag attgaaaagg gggaaataaa ttaaaataaa ataaagtaaa
      481 aatgaatcag agccatttaa gtggaaaggg gag
//
LOCUS       KCPA01000512             558 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 56227tic ultra-conserved element locus
            uce-4033, sequence.
ACCESSION   KCPA01000512
VERSION     KCPA01000512.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 558)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 558)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="56227tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>558
                     /note="ultra-conserved element locus uce-4033"
BASE COUNT          175 a          103 c          135 g          145 t
ORIGIN      
        1 gaaacctcag cttcttttca tttcccctag tttggtaaca tacatttaag ttactctcag
       61 ttttcgtagc aaataaaagc tgcaaaggtg ggaagtggtg tgaattaaaa caaactaaac
      121 cagagtccag gcacaatcac cttgtgtctg ggaacgacaa gggctttcct atcaaaggaa
      181 actgaaggtc acactttccc tcattgatct tgcaatgttt gttaattact ctgtcactga
      241 tgtggcgaag gataattaaa cagctctgtt tatatcttat atgcataatt atgtgcgctg
      301 ccactgaact catgaagact agagaatgtg cctctccaga aggggaacgg acagacggag
      361 atgagtttca gctgcattat taacaggagg aggaaaacac gcgcatacac aaaaggagga
      421 aagtttgatg gattcacaaa gtgctgagat caggggaggg gtgcgtgcag gtggagcaga
      481 ttaggggaag atctttcaat tacagatcca gcccagctga gtgataaatg gagagaattc
      541 aattcgcgca aagatttt
//
LOCUS       KCPA01000513             709 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 56336tic ultra-conserved element locus
            uce-3144, sequence.
ACCESSION   KCPA01000513
VERSION     KCPA01000513.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 709)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 709)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="56336tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>709
                     /note="ultra-conserved element locus uce-3144"
BASE COUNT          220 a          150 c          190 g          149 t
ORIGIN      
        1 aggggaaata acgccagctg caaaagaaag aaagagataa atgactggag tcacacgcaa
       61 ccttctcagt ttttgaatgg tgaggcatga acataagcat tgcaccctca actggagcct
      121 gactctgcct gcctgcacag agagccctgc aggagcagag caaggtggac aaagtagccc
      181 agccagtcaa cattagtgaa gcccttggtt tctaaacact gacctgcacc gaatttgaat
      241 gctccactga tgactgaatt ggttaggaat acaactgaac agcaggctga atacccagcg
      301 aggtattgtg ggtaattaga gattaattac aatcccatag tttgtatcat ggttcagggt
      361 cagcacgggg tcagtgcaca tggcaaactt agagagctgt gactggatgg atgacgccag
      421 ctcggagtgg ctcagcaaag tgaagcgtat agaaatgagg agccagtgag gctggggagt
      481 ggactcacag ccagggcact ggcgacagcg atgacacgga gttgtggggc ctgcaggcac
      541 tgagaaaatg ttaacaagca gcagagagaa tacagctgca ctaactatcc aactgcaacc
      601 ctgacttttc caattaacct tttccaggct ttctaagatt tgggaaatct ggggcactgt
      661 cctgttatca aagaaagctg ttaaagaaag aaaactagtg aggaaaact
//
LOCUS       KCPA01000514             413 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 56439tic ultra-conserved element locus
            uce-5541, sequence.
ACCESSION   KCPA01000514
VERSION     KCPA01000514.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 413)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 413)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="56439tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>413
                     /note="ultra-conserved element locus uce-5541"
BASE COUNT          148 a           76 c           63 g          126 t
ORIGIN      
        1 acatgatgac tttatatgca agctttgaca cacaagagaa cgccatgacc taatgcttca
       61 aagtttctaa ccttgctttg tacaatacac ttttcatgtt gctgcatttc atcaaattca
      121 tggaggtagt tatatgtgta aaaaaaatta ccataaaagt aacatgttgt attataataa
      181 tacatattaa atgtgcaaaa tgccgacaga tttgtgttga ccctttacag ttgaacacaa
      241 cacagattca acctaatcta actctgtaaa cctttaaatt gatacattag aagaatgata
      301 gataagcaac cacataatac aaggctatga tttcatcaaa ggattagggt gacataaagc
      361 actcaagctc cactctcgtg gttttgttac cagaacctca agatggaatt ttc
//
LOCUS       KCPA01000515             465 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 56549tic ultra-conserved element locus
            uce-4164, sequence.
ACCESSION   KCPA01000515
VERSION     KCPA01000515.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 465)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 465)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="56549tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>465
                     /note="ultra-conserved element locus uce-4164"
BASE COUNT          156 a           84 c           86 g          139 t
ORIGIN      
        1 tccctttatt tcagttacaa ggttcatttt tagattagaa aaatgtagca aaaagcattg
       61 acaataatag tttaaaaacc tcttattatc tggaagtaca tggaaaacgg ctcagctgaa
      121 cttgcatttt gttttagatg cttaatgatt acaaagaaga taatttatga ctgacatact
      181 tcttgtgcca agagaagagt tgaaagaacc tccagttacc tccattagac tgatagagaa
      241 gtctaaaaga gcattacact ctgcagtgcc atctgtcaaa atacgtaagt gaaataatag
      301 tagcaagctg tcacctattg ctcagtgata agagttttag acaaatcaaa acttctatgc
      361 cagaaatcca ttttgttatg tgatcctttc aggaaagtgg gggtccaaag gggaactcca
      421 ggtaatcctg agtctcctta atttgcaatt cctctgacgc cgaca
//
LOCUS       KCPA01000516             499 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 56656tic ultra-conserved element locus
            uce-3057, sequence.
ACCESSION   KCPA01000516
VERSION     KCPA01000516.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 499)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 499)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..499
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="56656tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>499
                     /note="ultra-conserved element locus uce-3057"
BASE COUNT          177 a           81 c           60 g          181 t
ORIGIN      
        1 ttctgttact ctgcattttc tctaagtcta aaaattggta ccatgtatga taggtccacc
       61 tcatttttct taatgatgtt tttattattc tttcactcaa ttaaaacaga aatggatatt
      121 gcatcttctg actgtataat tgttattgta atctgttttc gatcactgct agggaaatgg
      181 gtccaaaaca acataaacta tccacagcct cagaatacaa gtcattttct tttactacga
      241 tacttaaaga gacatttatc atgtttctcc gctaacatgt ttgtattaaa gaagttattt
      301 gtaagttggg aaaagacatt atgaaaatca ccttttactc caaagtattg tataactcat
      361 aatttataac cacatttctt aataaccatt caaaataata aggctggaaa ttgtgcacat
      421 ctaattttaa tatataaata atggaaatgc atataaacca aaatatgctc aaaatatgaa
      481 tttatattac tctcaaaaa
//
LOCUS       KCPA01000517             660 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 56760tic ultra-conserved element locus
            uce-3259, sequence.
ACCESSION   KCPA01000517
VERSION     KCPA01000517.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 660)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 660)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="56760tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>660
                     /note="ultra-conserved element locus uce-3259"
BASE COUNT          205 a          141 c          150 g          164 t
ORIGIN      
        1 aaaactcaga aatctattat cagtgcgagc atgtgcttat tgatcaggtt acctgtgcgc
       61 acctaatggt accggcgcac actcaggcag gtaaatattc acacacgtgt gcgtagatac
      121 cggtgggtta ggggtgcgtg catgataaag gctttaccaa aactgcacgt aaataaaaag
      181 aatggacctt ccccgtgaaa cgtgagcaca gaaacgctca caagtggcca agagctgcta
      241 aataattaat caatagagca gtgtggcagt ttgaaatgta aatgtgatgg atgaaggtgt
      301 gatgcttgtc atcaagcaga aaatgatgtg actggaatgg ataacccaca gtacctgcta
      361 actggcgaaa gcttggacac aaagataaag taaagccatc agaaagcaga cctggcaacc
      421 cctaattctt gcctttgacc cgcaattcac tttcatgtct ctgtcccaga agagctgttt
      481 aaaaaaatga tgaagagaga tcttggggtg ggaaaggggt gaaaaaaacc atctgaagaa
      541 atgctacctg acaaggctgc aggctacgtt cttgagaaca cctttctttt ctttatgttc
      601 tccttctcct gttaaataaa aatgcggctc cctttccttt cttccaaaac tctcccgagc
//
LOCUS       KCPA01000518             498 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 56865tic ultra-conserved element locus
            uce-426, sequence.
ACCESSION   KCPA01000518
VERSION     KCPA01000518.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 498)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 498)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="56865tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>498
                     /note="ultra-conserved element locus uce-426"
BASE COUNT          132 a           99 c          100 g          167 t
ORIGIN      
        1 aaattaatcc agacatttcc agggcaagtg tggctgacct tttgttcacc agctactgac
       61 cccagggtga atgaacgagc cttgcagaga gaaatgtctg ttgtttggct tcagtccctg
      121 gcatttaaat tgcattccct aatcgaatga aaaggctgtc ctctctatca ggttacagaa
      181 tccatggcaa catttggcct tttatatcca taatgttagc ctttttgttt gcagccaagt
      241 agagacacct ggagcaatgt taacattaac cgctttagca ttaatagctt cattatagaa
      301 gaatttctga tcagatagct gttacttttg ttatgttgct tcagcttgta ttgttttcat
      361 ttttgatctc cctgcttggc aaccgggcaa tgatttgcaa attttttttg tcttgattaa
      421 ttaagcaata taattatcag gaaccgtgct gcagtctttg cccaacaaag cttcggaggg
      481 aagacaatag taagtctg
//
LOCUS       KCPA01000519             517 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 56975tic ultra-conserved element locus
            uce-4364, sequence.
ACCESSION   KCPA01000519
VERSION     KCPA01000519.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 517)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 517)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="56975tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>517
                     /note="ultra-conserved element locus uce-4364"
BASE COUNT          169 a           94 c          102 g          152 t
ORIGIN      
        1 atacctttga caaaattgct ggtgaattaa aagtccactt ttagtgggca agattaatta
       61 tccatttaac caaatttctt attggggtag gaaaagtgga gagtgggata aagacgcagg
      121 tgggaaaagg ggcagaagct aggcttcagt attcagttac atgtgaaatg atttgtaatt
      181 ctgagtaatc actcaggaca agctcttgca ccattttatc tatacatgac tctaggccaa
      241 agtcaatact catagtaaaa taatgagatg aagctaactg agctccttta ttaatgctcc
      301 aaggagcaaa tctgatgctt aagcttctcc catggaaagt atccacttct tcctaaaatg
      361 aatgagtagg tcatgacggc cagtagtaac taggattctt acctccaaaa aaacatggaa
      421 aatttccttt cttatttgtg caccatgtca tgctttgccc agctgcacgt gaaaccatat
      481 aaattttgca ttaagcgtag actcattaga gaaatct
//
LOCUS       KCPA01000520             898 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 57088tic ultra-conserved element locus
            uce-1463, sequence.
ACCESSION   KCPA01000520
VERSION     KCPA01000520.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 898)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 898)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..898
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="57088tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>898
                     /note="ultra-conserved element locus uce-1463"
BASE COUNT          241 a          178 c          175 g          304 t
ORIGIN      
        1 ttctgaattt ctgctagaga tacaaatgct gcgtgtggca gcttcttcag gaggagacgt
       61 ttacttttgc aataacactg acaacatttt atagttgatc cgtgttttga agaggcattt
      121 gttgatccct aatttacata gcctgcaagg tgaaatagag ttatgttcta tattccaaag
      181 gtatgctctt ttgttcattc cagccctgcc tttacatctc cattttattt atccttctcc
      241 cccccctttt tcttttcatt ttcctctcat ttttcaccat gatgtagtta attttttttt
      301 cagctcatgc tacactttgt cttgtctatt gctatgtgac agaaaagcca gagacattcc
      361 atgtctggca gtacacctcc agggacatct tttgaactct cataatttgt atttattgcc
      421 acccactttg taagttcaca gtttaatttg ccagcagtgg cagtgttagg ccgacacagt
      481 aaaacaagat aacgttaaaa tgtcagaacg agagggggca tgaatgatgc attactcact
      541 gctagaactt gcacttgtca tgcctttcca ccaaagtgat gttaactacc ttttgagagc
      601 cttatctgac tggtattact cagaaatagg atcattagtt cactgctctg attagaaggt
      661 tgctatggtt gattaactct tctggaactg ggatcatggt gggaacataa catgaatcac
      721 actggattat gcatctagaa ctaattttat aaatagttgt ttacaattcg ctagtgggct
      781 gacaagagtg agagcagagg gaaaaatgga gcacatttta atggaaacat tcaaggtaga
      841 tttcggctga gctgtttctc cttcagtaca gtgtgctaac agtgacctgt tatgcaaa
//
LOCUS       KCPA01000521             842 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 57199tic ultra-conserved element locus
            uce-82, sequence.
ACCESSION   KCPA01000521
VERSION     KCPA01000521.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 842)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 842)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..842
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="57199tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>842
                     /note="ultra-conserved element locus uce-82"
BASE COUNT          222 a          165 c          149 g          306 t
ORIGIN      
        1 cattggcctt gtcttttctt gctcaaggaa acttttgagg gtggattttt ggcttgctct
       61 ctttccagca taaagcacct ctgtatttcc caaaagtgaa ttggggacag atctgcttgc
      121 acagggaaat aaaatagttt tccctgcact attttcttgg gagtatgcaa aaatcccatg
      181 tgcttttttt atgaactgga cccttctctt ttatagctgg tagtattcat gcttattaca
      241 atgccacata acggccttag acacttttta tgtccctcta acatagcacc ctagagaaag
      301 atgcttcact aagcaagaac cagtaaactt gctacagaat cagcggaata cttttcagaa
      361 aagtgcataa acttctgttc ttaaacattg tcatccttca ccttaacaag cacttcgact
      421 ggtttctatg ccttgttagg tctatcatct ttttaattaa tagtgttttt acgaagccgt
      481 ctgaactgtg tcatttccat tatcagaaaa ccattgccat taatgaataa ttttcatttc
      541 tgatccttga tatcatgcta gttgatctcc tgtttccatg ccgccgaatg atagcatcgt
      601 tttctgccca cgatcaaatt taatttggac tctgattata ttatgctgtt gcgactgaag
      661 tgtcaatttt tgtcaggcaa ttaggagcta taacctgtga agttaagttt gataggcatt
      721 gtaattggat tgttacagta atagcttgga acattccctt tttttcttgc ttctttgatt
      781 cttgatgcat actttagtgg tgagaacaaa ggcattttgt tattatgcaa ccataggata
      841 tt
//
LOCUS       KCPA01000522             493 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 57304tic ultra-conserved element locus
            uce-6459, sequence.
ACCESSION   KCPA01000522
VERSION     KCPA01000522.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 493)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 493)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="57304tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>493
                     /note="ultra-conserved element locus uce-6459"
BASE COUNT          157 a           87 c           92 g          157 t
ORIGIN      
        1 ctaggcagtc atttgttatg gcacttaaag gggaaaagaa acatgcttct aacagtgaca
       61 tcttcaaaat ttttcctaca gctaatttct gtaatataca agtatcatgt tcatggtctg
      121 ttgtcagtca aattaagagc atgttactta atgatctaaa ctgcaaaaca tcttgatttg
      181 cttcttttag gttatgtcaa ttttgtgcat aatacttgaa ggttaatagt gtgacaatga
      241 tggaccaaac catgcaaagt atatctttct aacaatggac aatttccctg tgaaatggat
      301 tggaaagaat gtgatagtgt acagaagact atattaagat tatggcactt cagtctgact
      361 tgctcaaagg caccattaaa attagaaacc attgtcttga aaactgctgc acacacgctc
      421 aagcttggct atagatcact tgtaggctct gcttgaattt ttgcactggg aatgctgcca
      481 agcacagctc ata
//
LOCUS       KCPA01000523             599 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 57412tic ultra-conserved element locus
            uce-4643, sequence.
ACCESSION   KCPA01000523
VERSION     KCPA01000523.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 599)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 599)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..599
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="57412tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>599
                     /note="ultra-conserved element locus uce-4643"
BASE COUNT          206 a           84 c           96 g          213 t
ORIGIN      
        1 aagaggttta catattcctt ataatacata tatgataaat taagctctct tttctgggcc
       61 cctttaaatg gaaggaattg aaaacacaat aatgatataa ttaattacag tcttacatgt
      121 gcagaaaaat tacaactttt tcgattagtg tgaaatataa gtgtcaaatc agtaataaaa
      181 tcctgatcaa taaaacaata ataacgatgt tgttaaaagt ggacctagaa aggtgttcat
      241 ggcaacatgt tttaggggtt agaaaccctt ttaaaataaa cggatttcat ctttacacta
      301 tgtcatctaa atcattacaa tgtttgtgta tacaattatc atcagacgat aaattgcagc
      361 tattgaatgg attaagtttg aactgtttga cctcataaat ctgggtttgt catagcttca
      421 gcaaatgctt gtgtaacaat cagttgatta catggcagag cagatgtatg tatgttaact
      481 ggaaaatatg aaaggatcag ggtaattcaa agttcattgg aagaagttta taaatgtctg
      541 acaatatcat gttctccata tacctttctt ttttttctat tctttttttc tcctatttt
//
LOCUS       KCPA01000524             701 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 57523tic ultra-conserved element locus
            uce-1055, sequence.
ACCESSION   KCPA01000524
VERSION     KCPA01000524.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 701)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 701)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..701
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="57523tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>701
                     /note="ultra-conserved element locus uce-1055"
BASE COUNT          233 a          120 c          120 g          228 t
ORIGIN      
        1 aaagcatgaa aattttcttc tagcattgtc tgacatcact tgcctacgac aacagctatc
       61 tgtgaaactg agacccttat tcaggaggtt aatgtgaggt aggaactcca ttcagtgtta
      121 ttttggctta agggcataat gtcacaattt ggtgcatcct ttaatgactt ttttctaaag
      181 gcagcttaca gcttagactt agttcagcga atttccttgc aaggtccttg gaaaatggga
      241 atgggtaggg agtacaattg attgtgtggc caaatttttt gttcatgtct gcttactgat
      301 ttttgttcat ttcacaaata aacaaggcat gaatacatca acccacaaac cataaacaat
      361 aaagaacttc atcctgtaag tttgctacgg ccagcagttt gtggctgaat ctgctatttg
      421 tcataagata aatgataaag tgattgccat ttgtcactga atacacaaga gaagtgttca
      481 gctgtgaatc acacaaatgc aggcagcagt aaatactgct ttcttattag taacttctta
      541 taaatgctta actaaaaaat tattttatct ataccaattt aatatgttaa caattttatg
      601 acaatatgca catacccata aagcatttac agtataaaaa tctaaaattt actacaattc
      661 attgagcagg aaaagatact tctatatgga aaggtacttt a
//
LOCUS       KCPA01000525             594 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 57635tic ultra-conserved element locus
            uce-5065, sequence.
ACCESSION   KCPA01000525
VERSION     KCPA01000525.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 594)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 594)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="57635tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>594
                     /note="ultra-conserved element locus uce-5065"
BASE COUNT          148 a          158 c          134 g          154 t
ORIGIN      
        1 cagccatgtg catgcacaaa cagggacttg atgcacagaa ccgggagcag cagtcttgta
       61 aataatggcc aatcagcgtc tcatctcctt taattccccg gcaatgcgat gattctgcaa
      121 gggtgggtcg gtcgtagctg caggtgctcc cggacggggg aggagcacaa aaatgaagtt
      181 gtttgcagct tttgattcca tccctggaat tatttacagc tgcaggcaat attaaactat
      241 gtagagcaag tgtcctcatt tacatgctaa ttcatttata ccctctggat tgatttctcc
      301 aattcatttt cagcccacta acccttctga tatgaattat attatcacct ccagaacagc
      361 agcagggaaa tgtgacgaag ctaccccagc tcttctgatc tctaattgcc ctcactgttc
      421 ggagcaggca tggccagctg cagctttgcc tcctggctac cagcacccag cttccttcca
      481 tctcctggag aaacaccagc ggtgtggctc ggagaggcca ctgccatcgc tcacaagagg
      541 aactttggaa ataattcctc tctctgctca ggaggaggag ccatctcatt tcag
//
LOCUS       KCPA01000526             508 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 57743tic ultra-conserved element locus
            uce-3152, sequence.
ACCESSION   KCPA01000526
VERSION     KCPA01000526.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 508)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 508)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="57743tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>508
                     /note="ultra-conserved element locus uce-3152"
BASE COUNT          144 a          100 c          127 g          137 t
ORIGIN      
        1 gaactgcatt tgaattagaa gactaagaaa ggtctccgac ggctgctccg ggctgattag
       61 cacgaggcgc gtgcggcacc aagagggaat tttgcggcgc acgtcgcgga taaaggagct
      121 gaaagccttc ccgtgacagc gagcagggag gtcatttggc aaccattttc tgcctagggt
      181 taaacgtcct cgccctgtca ctgtatcaag gttatctatt attggcagtg acaggtgaaa
      241 attaatctcc taattatttc ttgctgcgta atctgcactg aaggagtaac gtaaaaggat
      301 tacagtacac cctctacgga aggctttgct agaaagccaa tcatccaggg agatagaggg
      361 gatgtgggaa agagatattt atgacggatt tccaaccatt ttgaaggcag aatacactgt
      421 aaatttataa ccgacagctc tggagtgaag atattcttgc aggtatctta atagcctctt
      481 tttattgttg ataagattta tatccatt
//
LOCUS       KCPA01000527             790 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 57850tic ultra-conserved element locus
            uce-1150, sequence.
ACCESSION   KCPA01000527
VERSION     KCPA01000527.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 790)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 790)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..790
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="57850tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>790
                     /note="ultra-conserved element locus uce-1150"
BASE COUNT          260 a          128 c          182 g          220 t
ORIGIN      
        1 actaatgtat acatagcaat aggggacttt ggatagaatt ctttcagttc tcttaaaccc
       61 aatctaaggt taatttataa taaataatta tagttttaac agtaaaatga gaccctgtga
      121 agctgaaagg aaaaacagtt ttaaaagctg gatgtgctca caggtaatag ctatgactgt
      181 gtagatcaga catcgacact gaaagaagca taaattcata taattaattt tgccattgta
      241 aaaatcattt gctaaaattt gcattattaa cattatcaag tcgctggttg gtgagacatc
      301 agacatgacg agtgagaagg gcagcttagg gagaattggg ctttaaaccc tcagcagatc
      361 ggagttagga tcaaaggcgc ttgttttatg tggctgtgtg acactttgaa gtcttgactg
      421 cacctacagc actcatttca tcaggttcac tggtgtctta atagcagatc aataagtttc
      481 aaagtcggag agttaatttg atactagtgc tgatgtggtc gtgctgggga agcagagaga
      541 ggcaggcaga gaaagcaagc ctattaaccg tcctgatagg gagaggtgtg tgccaatgtt
      601 gatgggtacc tgtaaaaacc caaactgtaa atattgacct taaatatgaa agctccacgt
      661 actaaaggca tggagttgtt tacattgttg aaatagattg tatgcaagag gcaccattct
      721 tcagccaggc ggtgcgaagt tgtaagaaag ttaaggagaa taaatgcaca ctcctaagcc
      781 cctaaagcat
//
LOCUS       KCPA01000528             727 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 57962tic ultra-conserved element locus
            uce-664, sequence.
ACCESSION   KCPA01000528
VERSION     KCPA01000528.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 727)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 727)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..727
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="57962tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>727
                     /note="ultra-conserved element locus uce-664"
BASE COUNT          229 a          140 c          124 g          234 t
ORIGIN      
        1 gtgaggtctc aaagccacag tggctgggtg tggaacagat aatgattatc gtagaatagg
       61 aaaatgaaga gttacatggc attcaaaaac gagttctctc taatctttct taacctttgc
      121 tctttctgta agtagtgtcc tcaaaggagt attccttaat tcaggagcgt atactgcagt
      181 ataatggttc tcatttttca gttgggttat tacaattcat ttagagtttg atcctgtgat
      241 attttatctc aacattatat gacatcatta aagacatctt atattgtttt tgcctatggt
      301 tagaaattat gtctgcttaa tcaattccat tatgcattca accatccatg acacatcaaa
      361 ggctaataag atttttttaa aactttgctt gcttaaaatg atttccctcc agatcaagat
      421 gcagagcaca aaatattaat cagtttaaat aaatatcaag actacccaaa taatatgaat
      481 aattggcaca gtgcagtgcc tactgcccag ttcccaacag ctggtcacac tggcacatgg
      541 caccatctca acagtctttg agataatgac tttggcatct gccgatgagc gtttgctact
      601 gcccacagaa tttacaactc acaagtggga aacagaggct ccaacagaac ttttttatgc
      661 aaggtctttg aaatttatta atgtaatgca aacacaagcc ttccaaccca ttaaattgtt
      721 gatgtta
//
LOCUS       KCPA01000529             679 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 58071tic ultra-conserved element locus
            uce-5635, sequence.
ACCESSION   KCPA01000529
VERSION     KCPA01000529.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 679)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 679)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..679
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="58071tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>679
                     /note="ultra-conserved element locus uce-5635"
BASE COUNT          243 a          142 c          107 g          187 t
ORIGIN      
        1 gatccctgta agtataaaca ttctgatgaa gcaaaatgat ttagagttac aattaaaaaa
       61 actggagtaa gcaaaaagat acataggaaa cataataata atcctatccc aaaagattgt
      121 gctatccgag gggatctaga atattaatta gtaagttgtt gcaaacctat aaaaaatcat
      181 cctataatta ctctgaaaag ttgcaatttc aaagctacac tgcagaatag catactggat
      241 taattatgcc agactgcagc aataaccttg aattaaagct gcaaccttct atttttaaga
      301 aacaattgcc tttctggttg atgaaacctg tcatcccatc aggtaacaga cgtgaccagg
      361 aaagagaaaa gcaataatga gtcaatccaa gctgtttgat acatttcaaa tcttcctccc
      421 acagagtgta gctgccacaa gctacatcac cagtctgctt cttgaaaact cgatctcctc
      481 cctgatgagc gaatatgtcc cagacattag ggccctttcc atctgcattc cagccttctg
      541 cttgaaaaac aaaacttggt catttttgac atcaaaagac atatgttgca cgtaaataat
      601 tataataaag taggtgcaaa tccctaaaaa ccccatgggc aaatggagaa ctattctcta
      661 cccactcctt acattattt
//
LOCUS       KCPA01000530             521 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 58179tic ultra-conserved element locus
            uce-3308, sequence.
ACCESSION   KCPA01000530
VERSION     KCPA01000530.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 521)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 521)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..521
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="58179tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>521
                     /note="ultra-conserved element locus uce-3308"
BASE COUNT          143 a          135 c           98 g          145 t
ORIGIN      
        1 ttttttgtag ccatgtttgg caccataccc ctcccctgga caacctatta tttcacaaat
       61 ggatgctttc tgcagcctgt aaagaaaaag aaccctggat ctttaaccag ttcccttgtg
      121 gtttcttgtt ggtaatattt ctgggtacaa agggttacac tttaattgag ctgtcagcat
      181 ctccaacaat cctataaaac tccgattatg cacggcgggg ttagtgacac acttgttatt
      241 gtggatgccc tatttgctaa acccggccag gtcacctcac ccaggcgacc ttcctgtcat
      301 tagcctcgtc tattcctacc tcaccgctgt gaaaatcaca caaggaaagg cttcaaagcc
      361 cttgccagga ctgaattcga ccaggagcta atcacccaca aatccagctc aaatggcaat
      421 aattggctaa actgctcacc tctccagagc tcagcagtaa tttgggataa taaagaaaag
      481 aattattcag ctaactgccc tgaaatgtat gctttgtgac c
//
LOCUS       KCPA01000531             514 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 58289tic ultra-conserved element locus
            uce-478, sequence.
ACCESSION   KCPA01000531
VERSION     KCPA01000531.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 514)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 514)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="58289tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>514
                     /note="ultra-conserved element locus uce-478"
BASE COUNT          143 a           96 c           89 g          186 t
ORIGIN      
        1 aaaaccttca ttcttcttat cgtagttagc ctcaactttc taacagttgt aattgtccac
       61 agaaaacatt tcaagataaa tgcattatca ggttttgaaa ttttcttatt tttgtaaata
      121 ctaagaccta aaataagggc tatattgtgg attaagtgaa atatctcaag gctgtgcttt
      181 tctgataact gaacctgaag tgacctttct cagacacaat tacagagctg tatgtttttc
      241 ctttaatttc atcaggggtt taattagtat acaaataaaa cttcccttat cttcctttct
      301 acctaattgg cttgtctttg cttatatatg aagaatgtga aaatgggctg taattagggt
      361 gaccgtgtta accttttttt ctcaaatgta ctgttgccta aaggcctcaa agcctaaaac
      421 cagtgctttg gattattgct ttgcaatcac tatggctctc ccataggttt tctcatgagc
      481 agaagggctt tgggtgctgc aggttcccac tgct
//
LOCUS       KCPA01000532             340 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 58402tic ultra-conserved element locus
            uce-1511, sequence.
ACCESSION   KCPA01000532
VERSION     KCPA01000532.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 340)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 340)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="58402tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>340
                     /note="ultra-conserved element locus uce-1511"
BASE COUNT          111 a           67 c           51 g          111 t
ORIGIN      
        1 tccactgttt aatatcttgc tgccattaag agacaggata attacataga tataaaaatg
       61 ctcatttaac agcagttgca ataatgctca tcaagcattt ccttttgagt agcatatgga
      121 aaccgtagag tactgaaaga gttaatgcgt ttagaattca gtttccatca tacttgggtg
      181 actatctctt taaataattt aaatcctctc catcaactac aaagctgttt tgaagccatt
      241 tagctttgtt ctttacatgt gttctaatta agaaatgacc ttgtcatcac acacaccaga
      301 aatcctggat tatttcctgc agcaaaaatc tacgaagcca
//
LOCUS       KCPA01000533             799 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 58514tic ultra-conserved element locus
            uce-3451, sequence.
ACCESSION   KCPA01000533
VERSION     KCPA01000533.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 799)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 799)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..799
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="58514tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>799
                     /note="ultra-conserved element locus uce-3451"
BASE COUNT          263 a          151 c          183 g          202 t
ORIGIN      
        1 tgccaagaac tgccatctgc cacctacaag cgcaggtgcc agggagtctc ctctgcacac
       61 aaagcataat aatataacac aaaggaccaa tgtgcactaa taattgctaa acacacagaa
      121 agaggggcca gaacattttt atgaaagttt acttagtctg tggagatttg catacagatg
      181 gctaggtcag ggtgctgtgt atgccgcctg ggccactgtg gggtagggct gccttcaagc
      241 agcctttata agcacacacg gcttttacta tagcatagtg ttgtggagag acctcattct
      301 gcacacactg aatagtcatt caagtagctt gctttgaaat gagaaaagac cttggatggg
      361 gggaaaaaaa gcaaattctt ttctttgtga gacagaggag gagtgttggg aaagaggcca
      421 gaggacttaa agaatgtggg ttagcaacca ggaattagag gaaagtttct gtggagacac
      481 acaattagat atgtggcatt cacccctctc cttctagtgg gcaacaagag caagcacatt
      541 tcaaagggtt catcatctgc atgaaacaag gatgggggaa gaaaaagcac cctaattttt
      601 aaagtataaa gcaaagtgta actgtcttaa aataaaacaa acccaaaggt taagcagcaa
      661 gaaatttccc ttcgactaag agcatgaaga cacaaaccct gaatttactg catttccttg
      721 tgtgaatctg aatgtacata tgtgtgcata catacgaagg tgccttctga ttattttata
      781 ttttaaatca ttgcaataa
//
LOCUS       KCPA01000534             560 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 58623tic ultra-conserved element locus
            uce-4897, sequence.
ACCESSION   KCPA01000534
VERSION     KCPA01000534.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 560)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 560)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..560
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="58623tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>560
                     /note="ultra-conserved element locus uce-4897"
BASE COUNT          186 a          123 c          115 g          136 t
ORIGIN      
        1 ctgcataaag taatcccacc ctggcatctt atgttccccc aggtgaatag actgacaaaa
       61 aaaagccgaa aaaaaggaaa aaaaaatcca cccttctata tttgtaaatg ttaacaaaag
      121 ctaaacacgg ggttttgcta tggtaagaaa atgccaccct ccccttctcc ataaattggg
      181 cttctaggaa gcaatccctc ccccaagaaa cggcttgtgg ggagggcaaa gcaaccagct
      241 gggttgtagg agtaataaag aaggagaatc aatagggcat gcaatggagc caaggtgctg
      301 ccatttatca cgccgcttct ctgactccaa tcattcatca tgctcaatga ggcagcaaat
      361 aggaaaatga ctatttgtat caaacacatc tgcactcatc cactgaggta ttttattccc
      421 attaactctg aaagtaaaat acgcagagtt ttctagcttc tttcagctca ggttggcaga
      481 agaaattcac agcacatagg aacacaaatg actgcatgag tttgcaaagc attttggaga
      541 ggattttagt gagtccgcag
//
LOCUS       KCPA01000535             333 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 58724tic ultra-conserved element locus
            uce-7429, sequence.
ACCESSION   KCPA01000535
VERSION     KCPA01000535.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 333)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 333)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="58724tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>333
                     /note="ultra-conserved element locus uce-7429"
BASE COUNT          130 a           60 c           71 g           72 t
ORIGIN      
        1 aatgaatagc agtgcaatgt gtacacgctt tgtccctccg gcccttcaag tagcccccat
       61 tgaatagact aagttgacac tgcatgacag tgaaacaaca taataaaaaa tacatgagcc
      121 cctgaatagg agcaggcgca taaataaata aaatgggtga ccaaaactgg ataaactgaa
      181 tgacaaaacg gtgaaagggg aacaaaaaga tatttaacac gctagattag cattagaatg
      241 caatctacaa ggcagaacaa ttgatgaata ggtttaccgg ccaagaaaga aatggactaa
      301 atgccctttg aatagatatg ctttttgcaa ggg
//
LOCUS       KCPA01000536             747 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 58837tic ultra-conserved element locus
            uce-6277, sequence.
ACCESSION   KCPA01000536
VERSION     KCPA01000536.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 747)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 747)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..747
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="58837tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>747
                     /note="ultra-conserved element locus uce-6277"
BASE COUNT          245 a          141 c          129 g          232 t
ORIGIN      
        1 aaaaatgcat gaatacatgc agagtgggat ctggaatttt gctctattat tttaaacaag
       61 atgaaaattt ggtataaaac ataatcctga aagtcctagg gtccactaca atgcttggac
      121 aaaattcaaa tacattttat ccaaagtgtg gcaccgcttc catcaaaaaa ttatatgttc
      181 agtcacaaat ggttattgta aaatctttat taacctaagt gcatataaaa attgtgaatt
      241 cttaatacaa agcagtattt gacttttaaa tttcatttta agcttgccct gttcacttgg
      301 aatgtgatta cagagtaaat taaaaagtaa tcacatgtga attacatttc ctcatgaatg
      361 taatgacttc aggagactga ttaatgttaa gcagtgcctg tcctacctca tgcatacctt
      421 cccaggtgag atgtgcaaga tagctgtcgt gagttgattt aatttccttt ctctggtagt
      481 ccagtgagaa atgttgaaca gaaaccaatt cagcacgttc attagatctg tatatgttca
      541 cttcttttgt ccacccaagc accatctgca aaatgctatc agtgtcagct tatgattgtg
      601 agcaagaccc cagggactca ctcatcctgt acactgcatt cgagccagga aaactcttta
      661 catttagata gaacaactca gctgctgcat agagcaagag atacatatgt gtcagcatat
      721 tacagcctga tgaaaaacct tgtcaat
//
LOCUS       KCPA01000537             478 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 58943tic ultra-conserved element locus
            uce-2513, sequence.
ACCESSION   KCPA01000537
VERSION     KCPA01000537.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 478)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 478)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="58943tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>478
                     /note="ultra-conserved element locus uce-2513"
BASE COUNT          124 a          104 c           87 g          163 t
ORIGIN      
        1 aaagcttatt tgcctgagcc gttaagattt tttctcacag ttctgcctgt ggcgcctgtc
       61 actagcagtc aaataaggac aattttacca ttctctcctg ctgctctaat tttttttttc
      121 agtgccagta catgtatttg ttattcttta taactccctt tgaagttggg aatccaaggg
      181 gaatctaaaa ccgaccagat gtttctgctg ctggagacac agaagacagc aaggattaag
      241 tttaactgaa acttagttct ctacaaaacc ccattagagt gagaattctt cctcagttag
      301 ttttatttat tatttatatt tgcacttgcc atcctgggta ggtgatacct caagtcatct
      361 ggcccgagag aaaaatggat gatttatcca agtaaatagt gtatcagcag ctgcctgcgt
      421 tgatttccct tatggggttt cagttccatt acactgcata tttcccaccc acactctt
//
LOCUS       KCPA01000538             480 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 59051tic ultra-conserved element locus
            uce-3606, sequence.
ACCESSION   KCPA01000538
VERSION     KCPA01000538.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 480)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 480)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="59051tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>480
                     /note="ultra-conserved element locus uce-3606"
BASE COUNT          174 a           65 c           81 g          160 t
ORIGIN      
        1 cctgtaactt cattgctatt gagaaggtgt gaaaaagggt cagtaacccc atagtcgtct
       61 tataatcagg aatgatcagg aaatgtagaa ctaaatatag agaaaaggga aagttagtga
      121 atatatttgc atatgcaaat tagcttaatt gatactgctt gcctctacag ggatttttca
      181 ttacaaactg gagtgctaca ttgttcagct catattgagt aatttagtaa ctaatgagac
      241 cagtttgcac taatttgcat atgataaatg agcttaattg cagtaaataa cttggaggca
      301 taattactta attttcctgt gttgcatggc ttttaagttc acgtatgaac aactcaagat
      361 aattttgcat atttaaatta gttgctttta aaattcttga acaaaaaaga acacacctta
      421 caatttgaac tgtagaacaa ttaaaagtat aatgtacata ttttcaaatg aaatttaata
//
LOCUS       KCPA01000539             805 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 59163tic ultra-conserved element locus
            uce-6953, sequence.
ACCESSION   KCPA01000539
VERSION     KCPA01000539.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 805)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 805)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..805
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="59163tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>805
                     /note="ultra-conserved element locus uce-6953"
BASE COUNT          164 a          214 c          221 g          206 t
ORIGIN      
        1 agcagtcagt gcagcattca ctgggcacag ggctgtggtg aagctgcctt agcttttcag
       61 tatccccttc tgttcctacg agctttccag tctggtacca gagtggtgat tcccttttgg
      121 actattggga tgagcaaccc cagagattgt ggcaggtcag gtgagaaaag tgaatgtggg
      181 gagggagctg gcaagtcgcc accagcactg cagccagcag cacatcctga caggagcaac
      241 gagttttcgt ttgcccatga ggaccaagaa gggtggctca ggagctgctt gtgctgctct
      301 cagcctttct cactctgtgt ctcttcctgt tccatctctt ctccttgttt ttccagaaaa
      361 gaaagtccag ttccagcgtt cagttaatgg tgagtgtcct tcgtcttcct aaatgccgat
      421 attgctgggc ctctccacat gttccagctt cccccgtttt tggaagttac ctcggggtag
      481 ggaagaaggg acagcggggt tggagggaac atcctcaaag ccgtatcacc cacaaaaaca
      541 gggttggtgc aggcacttgc tggccaccag cccctggttc ttgctgatgg gttctcatgc
      601 cgtttctccc agttctcctg actcaggtct gcaggctgca tcggtccaag gagccttgga
      661 gaaacacctt ccatgcctct gcggggactg tatggtcatg ggacaccttg ccaacctaca
      721 tcggggtctt ctgggtaata cacaagcaag gctctgctgg gaagagctag cagagccatt
      781 gctctagctc cgctagcaga gttgc
//
LOCUS       KCPA01000540             550 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 59271tic ultra-conserved element locus
            uce-4823, sequence.
ACCESSION   KCPA01000540
VERSION     KCPA01000540.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 550)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 550)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="59271tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>550
                     /note="ultra-conserved element locus uce-4823"
BASE COUNT          184 a           84 c          108 g          174 t
ORIGIN      
        1 acctgtgtta aaccaaaagg agtagggcag accaaagcag tttattaagc catagttgtc
       61 agagcaaaat aaggcacgct gagtttatct gatgtcacat agacaaacac tggtgttaat
      121 attcattgta tggcttaact ggttcaatac agaatagcag cacaaatgca ggagatgctt
      181 cttatgtagg tcttcgtgtt gtttcaaagt ctttattatt atgacagcaa agtcttgttc
      241 attaaagttt cacaatccat tttcattagg atgaaactga ttctgtaaat gaacagttgc
      301 tctgaaaaat caaacccttg cagctatcac aggggaggta caaagtctgt attaattatc
      361 aggaatatgg tgttgatcga agatgttaat tgccctgatg gttagttatt tggggaattg
      421 ccatgcattt catgcaggga taataaaaat gaatttttaa acaaagagat cttaaaataa
      481 tatataatct gtagagaata ccaacatcaa aggcttatct caaagctttg aattttatct
      541 ttgtggtcca
//
LOCUS       KCPA01000541             617 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 59381tic ultra-conserved element locus
            uce-4524, sequence.
ACCESSION   KCPA01000541
VERSION     KCPA01000541.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 617)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 617)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..617
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="59381tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>617
                     /note="ultra-conserved element locus uce-4524"
BASE COUNT          145 a          130 c          157 g          185 t
ORIGIN      
        1 caataaggta tgtgggtcct ttctctgtat tggttctcaa gagttgatcg cgtttttctt
       61 ttggagctgg cctgacgttg tgagataaag cagctcagaa aaaaatgttc tcaagcagat
      121 gcctttaaga gacagaaatc atgaatttgt tgaattgcaa ccactctggg ggtggctaca
      181 atgacttttt gacagtgaca gtaactctgc cttgtctttt cgagcccttc tttggcccat
      241 tcactctgga aagccgctta agcgcactta agcgcattag catttggatg ctcggggacg
      301 tattgaccct catttggaaa gtttaaatga gtgaaagatg gagcgatttg ttagggcttt
      361 agaaaccagc tttagagagc tgcgggtttt ccgctctggt ttgttcgggt gcttgttcta
      421 atctggtgtg ctgtttgaag ggaccagact gatttgtgac acatgagccc aaagcctcct
      481 ttttgggctt gacccgatta tctgatctgt gctctgaatt tcaatcaccc gcgtttggga
      541 atggctcgtt acctcaccct atggacacag atggcaaaac ggccactgcc gtctcagcag
      601 acaaagtgag agggaac
//
LOCUS       KCPA01000542             363 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 59487tic ultra-conserved element locus
            uce-528, sequence.
ACCESSION   KCPA01000542
VERSION     KCPA01000542.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 363)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 363)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="59487tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>363
                     /note="ultra-conserved element locus uce-528"
BASE COUNT          103 a           53 c           66 g          141 t
ORIGIN      
        1 ccttctgcct ctgtatttgg agttgttagt gcaactcatc aaagaaaact gcctaatata
       61 tatatatggt aataattttt cctcttttgt agtctgcaca agatccatga aagattgtat
      121 ttttattact atttaaacag tgattaaatt tagcctgagc agtgagcaag ggttcacatg
      181 cattctttta tactgctgga ttttgttgtg catcatttaa aacattttgt atgtttcttc
      241 ttatctgtgt atacagtatg ttcttaaata atgttcaatt gtcaggagaa ctgtgagaaa
      301 taaactatgt ggatacagtc tgtttatata tagaatgctt gctgtgactt ccaatggagc
      361 tgg
//
LOCUS       KCPA01000543             483 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 59599tic ultra-conserved element locus
            uce-1200, sequence.
ACCESSION   KCPA01000543
VERSION     KCPA01000543.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 483)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 483)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="59599tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>483
                     /note="ultra-conserved element locus uce-1200"
BASE COUNT          131 a          120 c          102 g          130 t
ORIGIN      
        1 acccggggca gcgcgttcga tgcctttcat gtggttttta ctgtatccct ctggatgtag
       61 ttctgaagaa acatttctcc tgccaaaata cacacacagg ctgggattaa aagggctgaa
      121 acctaccacc aagttcttac cgccctccca ccatcattag actaaatccg ccgtcattcc
      181 agattcattt ttcccttatt catctgtcca actaattcct gctgcattca ccgggcttac
      241 atcttaatct tttctgttac atagagaata cataatgaaa agctgcattt tctgggtaca
      301 tgcacacatt tggagcggat gaaccatatg tgaagtgaca tacaatgctg aatgggggct
      361 gaatggtgtc cagtgctaaa aacagtgcaa gtccagaaag caggagaaca agagccctgt
      421 gctgggcttg cctcgctcga acaccagggg attcgccgct aaaacatggg tataatttca
      481 ctg
//
LOCUS       KCPA01000544             621 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 59711tic ultra-conserved element locus
            uce-3082, sequence.
ACCESSION   KCPA01000544
VERSION     KCPA01000544.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 621)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 621)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..621
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="59711tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>621
                     /note="ultra-conserved element locus uce-3082"
BASE COUNT          197 a          132 c          134 g          158 t
ORIGIN      
        1 ttgctgcaca atggcacgat gacattgggt gttttccagt aaattttttg ctgtgtgtca
       61 cgagcaatgg aaacaccaga gcaagcgcgt cagcgttaga tgcacaccta agaagaataa
      121 aaagaaaaga gctttttgca ccagaatttt ttcttgaaag catcgggagt cacatgactg
      181 agcccggagc ctccaggata acgcagcacc agcctgcaac gggaaagaaa ttaagcagga
      241 ctgcctccgc ctcgcacacg cctttagcct gtcgacgcgt tgcctgtccg tatccctcac
      301 agcgcatctg tagagccatt aaattggata atccctctgg cctttgatac atttctggac
      361 atgattattt cattactcgc agtatatcag taggatcata ataaaaagga cttctgacaa
      421 cctgccaaga gttttgtggc cttgtaaaca caaaagtgct ctaataaaat tttattaagt
      481 gttaaaaagt cataaaaagt gaaataacat aaactacaaa atttactgtc ctcagcaaat
      541 gctgaaaata tcgtccatag taaaattaaa ttagcatgta atagcgcggc agcgtggagt
      601 gggcttgaaa gaggatccgg g
//
LOCUS       KCPA01000545             593 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 59820tic ultra-conserved element locus
            uce-2637, sequence.
ACCESSION   KCPA01000545
VERSION     KCPA01000545.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 593)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 593)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..593
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="59820tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>593
                     /note="ultra-conserved element locus uce-2637"
BASE COUNT          219 a           93 c           90 g          191 t
ORIGIN      
        1 aggaaagaag catgtagcta ctatttctcc cacattggaa agtttgtgat ttctatatta
       61 tataatgcag aggattagct ttaacaatct aaatgcgtct aagaatgatc aggaagccaa
      121 ttgatttttg aatagcattg agtgggtcag catgaaaact tgcttattca ctttagcacg
      181 cgcttcacag tatatgtact gtactatact gaaaatttta taactacaat ttaaaagaat
      241 aagaaccaaa aacaactgca aagatagtgt acaactatgt tatgcataga acattgcttt
      301 ttctaagggg aagcatatga gcatctcagt ttatacaaaa agcaggacga tagttgtcag
      361 tgcatcctgg tgaaaaaccc tcagcttaaa aatttaatta taagctagat gctaatcaga
      421 aaatattctt tttccttaaa tttcttcaat acatccccaa atagtgattt aagcatcata
      481 caaagttaaa cttcaatagc atacaggtat ttatggtttt catatgaaaa atgtaaggaa
      541 atttgctcaa aacatatgtt tatacttttt ttaccacaaa catatttata aac
//
LOCUS       KCPA01000546             736 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 59929tic ultra-conserved element locus
            uce-81, sequence.
ACCESSION   KCPA01000546
VERSION     KCPA01000546.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 736)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 736)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..736
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="59929tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>736
                     /note="ultra-conserved element locus uce-81"
BASE COUNT          228 a          178 c          179 g          151 t
ORIGIN      
        1 cacaagggcg gtacggtcct caggaggcaa acacagcagg gtgcagccct atggagatga
       61 ttccgcttct ttgtgccttg caggatggca gctctgctgc agccacacta actcctcact
      121 gctctctgca gagccatggc aggagacaat aacacacaac cacagctctg agccactcca
      181 aggaaggatc ctacctcaca caaggctgtc caagaacttg acaggactct gtttgaaaaa
      241 gatgttgaaa gaaatgatct ctttaagtgc aatgggagat atttgtctct gatttaccct
      301 tggctttttg ctctggttca ggtaggagcg gtgtgggatg gctggcagat ctgagagcat
      361 ggcacgcccc agcgggcaaa gcgagcagtg cggaggaagg cgcgagtcag tttggagtgc
      421 tccccattta tcaaactcac gcagcccgcc agcagagcga gtctttccat cattacagct
      481 ctcaaaatcc gattcatacc actaatcctg ccttcattct cccagattaa taacatctct
      541 ttcaaccttc acagtgtgat aaatagacaa agagagaaca aaaggagaaa cagaagtgag
      601 agaaagagcc agagcaactc cacataataa agagaaccaa gaaaggggaa aggaaaaaaa
      661 agggaaaaga aaagggaaag aaaggagcct gcacacttga ctctgccatt tactttagca
      721 gattctccct aagagc
//
LOCUS       KCPA01000547             718 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 60027tic ultra-conserved element locus
            uce-1190, sequence.
ACCESSION   KCPA01000547
VERSION     KCPA01000547.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 718)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 718)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..718
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="60027tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>718
                     /note="ultra-conserved element locus uce-1190"
BASE COUNT          249 a          132 c          131 g          206 t
ORIGIN      
        1 aacaaacaaa cagaaaacaa aagcagaaaa caaattaaga aacaaaatca aagacattag
       61 cttgcaaact taggtaattt agaattctag aaacaatcca atggctactt taattaacac
      121 atcctctctg caatcagctg aaggcgtaca gaaatatata cttttacacg gcttaacacg
      181 gccaacataa aatagataat ataatctgaa agataaatag agtttaatac cttagtaatt
      241 tgtacttaga aacaaaggcc ttggtgcagt cttgttgtgt gcacttgtag ggcctctctc
      301 ctgtgtgaga gtatgagtga acctttaatt tctcaacact gttaaaggcc ttgtcacaca
      361 gttggcaagg aaagtttttt cttggtttgg tttcaccacg cttacgtttc cctgaaggga
      421 ctttctgggt atctcttact tctgacaaat caccaggaat gacagtggcc atcgcagcct
      481 aaaccaggcc ttcttgttgg acacttggga attgcccaac tccactaaat gatttagctt
      541 tagatggctt ctcaagtttc atgtggtcgt aaaagaaagc aaaaggggac tggaaaaaaa
      601 aaataagaaa caactagttt gtaactaaac ttagattttg aagtttactt gctatgtgat
      661 gcttctgaat aaaacttaaa aataaagtta ggttcagctg gtctaatgta acacctac
//
LOCUS       KCPA01000548             629 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 60136tic ultra-conserved element locus
            uce-1288, sequence.
ACCESSION   KCPA01000548
VERSION     KCPA01000548.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 629)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 629)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..629
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="60136tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>629
                     /note="ultra-conserved element locus uce-1288"
BASE COUNT          193 a          111 c          115 g          210 t
ORIGIN      
        1 tcttgtttgt gtgaaccagc ttcaaagtga atggtaggag gatctaggta gctggaatta
       61 ttcagctttt aaatctagct aaaaatagaa aatggtagca agccttaagg atgcaaaaaa
      121 aaagatggta tcattctgct agtgcatctt gcttaacttc tgatttatct ttcaaaacgt
      181 ttctttttat tagcatccat atccttcaga ggagcagaag aaacagttag cccaagacac
      241 gggacttaca attctacaag taaacaactg gtaagtgacc ctacaatcaa tatctttact
      301 cccatggcta aactgcaatt tctaaataat tgttttcttt ttcatttctg aaccaaatgc
      361 aattgactag gaaaattcct gtattcattc ttcttaagta tgaaaatagc acttagggaa
      421 tggtaaagct aacctaggta aattgttttt caagatcatt ctctttccgc tagcaaagtg
      481 tccaactgag ccttggattc tgttcaggtc tttcccattg aaaacacctg aaaagccaca
      541 tagttttgca cagtcatagc atttaggtta tcagtggtaa tggttggctt tgtttaggtt
      601 ttgagtggtg atttagctac aagcatttt
//
LOCUS       KCPA01000549             716 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 60244tic ultra-conserved element locus
            uce-7823, sequence.
ACCESSION   KCPA01000549
VERSION     KCPA01000549.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 716)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 716)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="60244tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>716
                     /note="ultra-conserved element locus uce-7823"
BASE COUNT          240 a          129 c          125 g          222 t
ORIGIN      
        1 acttttctgt ctaagatggt tactgcatca cctccagtca gaataaaaca tctctgttgt
       61 gtatcaagat tcatcatcca gctgagctag aattccctgt ttgctctgag attgtggtct
      121 cctacatgac agtaaaattt gtgaagtcct atctccaggt tgccctgaca tttatatttt
      181 agccagaaag aaacattaag aaggcctaca gactaggaag acaattgaaa aacctctaag
      241 aaaggaaata tcttattaat tcattaagtc aaactgcttg tatctacact tgtatgacta
      301 gaattatggt tcattaactt catttcttta tatgagttaa ttagctcaga ggaggccaga
      361 aattaattac cagcttatat agtttgtgca gaatggcatt ctgtttattt agtttctcct
      421 attaactttt aatctcttca aacaataaaa gaggtaatta gtattttata aacaaaaatg
      481 aacgcaacaa aggcaaataa tttgccaaat agtgaggctc ctgtgtggaa cctgatagtt
      541 gtgtggttca agttgcagac cttttcactg ttaagtataa gcaaaaattg aaaatatagg
      601 tagtcttcag gcaaggccat gcaatccatc atgaaagaag agctacctac taatacctca
      661 cggagcagag aaacgagccc taaaaagttt ccagctgttt gaaaataatt gcccat
//
LOCUS       KCPA01000550             691 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 60356tic ultra-conserved element locus
            uce-6568, sequence.
ACCESSION   KCPA01000550
VERSION     KCPA01000550.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 691)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 691)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..691
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="60356tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>691
                     /note="ultra-conserved element locus uce-6568"
BASE COUNT          217 a          128 c          134 g          212 t
ORIGIN      
        1 aagtgaaaca attttgttta atcccatgta ccctaaagta ggagtgcagc cacaaatgga
       61 attaaagtaa tggtgatgca ccactatagt gaaaagaatt tacgtaattt aacatgctca
      121 actacttggg aaaattttgg tcaggttagt tttcattatt gttaagatca gacgactgag
      181 cctatagcaa aattaaacaa ttggttgagg tcttttgatg acaatagcat gcccttttta
      241 ccacgaaact gtggaaatgc tctgcgcgtc ttcccagcac ccggagtcat ccacccccat
      301 cttataattc aacctgcaaa cagattaagc agctgagttt gtggaaagtg tgtttacttt
      361 gagctaagaa cccttgtgtg acactataga gattcctctg acacctctgg gagagctaca
      421 cagacagttc gtactcatca gcagggaaac tgggctgaga attcccaatt tctttgtaac
      481 ctcaactgct tcatacaaat cggtgtttgg caattaggca ggaactcatt tgttagctta
      541 gattttattt agaagatgtc gtatgttcta catttcaaaa aagaactgaa aattcataaa
      601 cctgtcaaca gtttttggta ttaattacag tagtgtttgt tatcactgcc ttaagaggat
      661 gaaaatgtgt cactaaaatt tgtagactaa a
//
LOCUS       KCPA01000551             447 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 60458tic ultra-conserved element locus
            uce-955, sequence.
ACCESSION   KCPA01000551
VERSION     KCPA01000551.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 447)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 447)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="60458tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>447
                     /note="ultra-conserved element locus uce-955"
BASE COUNT          156 a           74 c           79 g          138 t
ORIGIN      
        1 cctttccaaa agctacttct tgtaaactcg taattaataa taataataat aaaagaagcc
       61 acagtctcac catttgaaaa cgatactttt gattgctttc ctaactgtca tggacaagga
      121 catgacacag attatttcta tgcacatatt agttaaaaaa tccagctgac tttagagttt
      181 gtcaatatca ggagaggtaa ttaactgttt tgaaagaatc cgtaatgtgg gactttgtaa
      241 tggcatcatt tggagtcaag tcacagatgc ggcgtgtgga gccatactgt aattaggaag
      301 aaatgctgta caggttttct actaattagc aaattatgct gaaaatagca tcaagctaat
      361 taacagttat tatggcattt ttgaaagtat gactttaatt agcaaagtcc tgacgcatgc
      421 aatttcaaac ttgtccagaa aaacaca
//
LOCUS       KCPA01000552             355 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 60563tic ultra-conserved element locus
            uce-75, sequence.
ACCESSION   KCPA01000552
VERSION     KCPA01000552.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 355)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 355)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="60563tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>355
                     /note="ultra-conserved element locus uce-75"
BASE COUNT          140 a           54 c           50 g          111 t
ORIGIN      
        1 aaggaaagaa aattctgcct aaaaatgcac ttccaggggg gaaaaggccc cacaaaagag
       61 atacaggggg ttggaagttt aatacagaaa atctatttga tatttattaa acttagtttc
      121 tccagttaca gttttgcatt gtacaaagca ttttaatgac acagtagtta aaaagatctt
      181 tacaaattga aatgtgatac ccttttctcc aaatatttta attgccataa atttgtttaa
      241 aaatacacat taaacgcatg tttcagacac taaactttct ataatctcaa taccacaaaa
      301 tacatagaat atactataca gatgtggaaa aaatctagtt agtatataat acttt
//
LOCUS       KCPA01000553             665 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 60673tic ultra-conserved element locus
            uce-6209, sequence.
ACCESSION   KCPA01000553
VERSION     KCPA01000553.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 665)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 665)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..665
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="60673tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>665
                     /note="ultra-conserved element locus uce-6209"
BASE COUNT          185 a          158 c          142 g          180 t
ORIGIN      
        1 gtgccttgct ttcttgcctt tccttagctg tcactacatc tcgccccctg taagcagctc
       61 agtctcatta aaagcaatat ggtgaaacta gccacatcat tacatacact tagaaggggc
      121 tcttgtagcc agcacttacc attcataata gctgccactt agggtttctg aaattggcac
      181 cttcctcgtg gtttgttccg tgtcttactt tgaaatttac atgtcttcag aacaaataaa
      241 attcacaaca acaaactaat taatggattc cagttttgac agctacaaga agacagatga
      301 gaaagtaaca tgcttctggc agtgtgttat caattgggag gcaccagtgc atcgcctcta
      361 tgtggtacag tgagctggaa ccgacactga cagatgacac agcccttgac agtgaagcct
      421 gtatgagctg acagctccac ttgcactcag gcaggtccac gctcggcact ggaactgaac
      481 cagcttgatg tgcagaatat gcttgctttt atcccccggc tgtacagtgg gcaggctgag
      541 cagcactgtc aggtggagcc caggacttac cacgaaagtt aaaactgtga caagtgctaa
      601 gattttacca gtaaaaataa attaaatcag ttgataagga tttatcttcc agccagtgcc
      661 ttgct
//
LOCUS       KCPA01000554             445 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 60784tic ultra-conserved element locus
            uce-5948, sequence.
ACCESSION   KCPA01000554
VERSION     KCPA01000554.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 445)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 445)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="60784tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>445
                     /note="ultra-conserved element locus uce-5948"
BASE COUNT          137 a           67 c          109 g          132 t
ORIGIN      
        1 tttttttttg gatttggaca gacttaaaga agtggcatca aatttgaagg gcacccaatc
       61 aatctgttgt cctagctgca tgaaattgta tttccttgcc acttcatatc ttatttgcag
      121 cagctgggct gtaagtcatt ggtgataaca ttctttatta tgcagccgtg tttatgaact
      181 gtgcctggaa agagatgata gaaatatgca gcaatatgca aaggggggag ggggaataaa
      241 tgcttgttgc tagggcaacc atggggctat tttgggcatc aaattttgca gatgatgaaa
      301 agcattttca tgtgatgctt ggtctctctg ggaagagaag aggagagagg gcacacaata
      361 aacgggaaga taatattcaa gaaggcagtc atttatatat aaatacatct atagtttcag
      421 ctgcactgga aatgcattaa aacag
//
LOCUS       KCPA01000555             601 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 60890tic ultra-conserved element locus
            uce-3902, sequence.
ACCESSION   KCPA01000555
VERSION     KCPA01000555.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 601)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 601)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="60890tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>601
                     /note="ultra-conserved element locus uce-3902"
BASE COUNT          186 a          121 c          118 g          176 t
ORIGIN      
        1 tttcatgctg ctttccactg tcacacattg cacaccctat ccttccattc cagatcttat
       61 atccaacaag cttttgctga ctacataacc ttcactaacc tgaaattcct gagtagtccc
      121 aggagctcaa tgcatcttgg aataaaattt ttgtaatgtc atttaagggt attcctaatc
      181 cagaattatt gaggaggcct gggtcatggg aattgagttt gacacttgac aaatacttgg
      241 ctttgtgtaa atggacaggc cactgaaata actacctttg gatgtcacat gaagagaaat
      301 taattcttta ttaacttccg caatgataat ctaataaact catttggtct actagtttca
      361 gcacttaaag agctcagtcg attagatgca aatagaccct ctggagcagt gcctctgtgg
      421 tgtgcaaagg gacatcagtg tgaaaagtca ggcctgccat gtcaggacat acatgtccag
      481 ttcgctgctt agcatgaggg aaacaggcac agcagaagga caaatagcag gggctaaaaa
      541 taccttatta ggaaagaaaa gggtcttatt ttttaaacaa atttgctata acttgaattc
      601 a
//
LOCUS       KCPA01000556             533 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 60999tic ultra-conserved element locus
            uce-7292, sequence.
ACCESSION   KCPA01000556
VERSION     KCPA01000556.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 533)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 533)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..533
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="60999tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>533
                     /note="ultra-conserved element locus uce-7292"
BASE COUNT          177 a          107 c           90 g          159 t
ORIGIN      
        1 ccaattacta ctgtacttaa cctaatgaaa ttttattctg cgggattctt aaacaaaata
       61 taagattaaa aacttcgaga caaagaaact cctagagaaa agatgcaaat aaaattactg
      121 ttttttactt gcaagtagga gaaacaaaag cacggaacat agcatctgtc atatcagaat
      181 ataaaaagat gatcctggca ccaaatgaaa aagctctaat tcatttgcaa atcaagcctg
      241 ccagttctat ttcaagctgg cggtaactgt caagagttaa caagataatc actttcaatc
      301 ctgccttcaa tggtacatta cactgttatt ccattcaata aggcccttct ttggggcact
      361 ggatgaatgg ttttcatttc aaactcacac aaaaagttgc tccatggggc ttaagaaaga
      421 aatcccttta tgggcattta tctgccggca cttgctttta ggcaaaatga gatatttgga
      481 tacattggtg tccattcact tcctctattc cttcaggccc tcagtctggt gat
//
LOCUS       KCPA01000557             670 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 61107tic ultra-conserved element locus
            uce-1579, sequence.
ACCESSION   KCPA01000557
VERSION     KCPA01000557.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 670)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 670)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..670
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="61107tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>670
                     /note="ultra-conserved element locus uce-1579"
BASE COUNT          169 a          113 c          135 g          253 t
ORIGIN      
        1 ttaacagatc tgtcagaaca aagcaaatat gtcatattgg cagctgttac ttatgagtac
       61 tttttcttta ttgcattttg ttttgtaata attgagaagc ttttatgttg agctctgcat
      121 aaatggtact gagtgggagg gtatgggcat gctttctatt attctgcccc tcatgcatgt
      181 ctcctttttt cgtctttcca gaaccacaca ttgagccagc acgcacagtg agccactggc
      241 actacaggac acctctctgc agaagacttg acggtggcac agtggggagg accatttgaa
      301 cattacatcc aatcaaagtg tcatttgcaa cccagatgta aaactctaat gatttggcca
      361 tgaggcgctg ctattataag cagctggaaa tgaatattaa tggaagagat taaaagtatt
      421 ccatgctcag tattttttat tgtcctgttt cagctagtgt actttagagc ttctgcttct
      481 gactgaattt atagtgttag ataaatctgc tttgatgctg ttgccctttg ttgcttcttg
      541 tattatattg atagttaaag attagatgtg atttttttct tttttgttaa ctgcttttta
      601 attgcaattt taggtaactg tgcattgtga tgtgattgct tggctattgt ctgaatattt
      661 ctttttaatt
//
LOCUS       KCPA01000558             543 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 61217tic ultra-conserved element locus
            uce-4532, sequence.
ACCESSION   KCPA01000558
VERSION     KCPA01000558.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 543)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 543)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="61217tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>543
                     /note="ultra-conserved element locus uce-4532"
BASE COUNT          170 a          110 c          117 g          146 t
ORIGIN      
        1 gtattgtaat ttaattttct ttaatgatat aaatgccaag taaatcatta aaagaaatgt
       61 cagctctatc agtggcagct gctgttacta cgaaaaagga ggggaagtgt aggagcaggg
      121 cagccagcaa agcccacagc ggtctgcaaa gtcactagtg ggaaaacaac aaaggccttt
      181 ccatgcaact aacacagatg tgcccatagc caaactgtca gaagcagtta gggtgacagc
      241 tactcacagt tcattatttc cttctcacag gtcactgggt gacaagctgg gtcaccatgc
      301 tttgtcggct gctacaaact gcccccagtt ctgatgtcag ttaaataaag gtgtgatgtt
      361 cattacacct tcattttcag atggatagat gacatttcct ctctgtgacg agcaggaact
      421 ggatttgtgt cagcagacac aactattaga ataattttgt caagatgtga ctaaagcaga
      481 taatgaaagc taatttgtca ccaattcgaa gttttaacct ttagaacgcc tacatggcag
      541 ata
//
LOCUS       KCPA01000559             699 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 61326tic ultra-conserved element locus
            uce-5190, sequence.
ACCESSION   KCPA01000559
VERSION     KCPA01000559.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 699)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 699)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..699
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="61326tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>699
                     /note="ultra-conserved element locus uce-5190"
BASE COUNT          182 a          157 c          153 g          207 t
ORIGIN      
        1 tgcattagcc ttgctggttt atcttaagca tactcagtag acttgcctca gtttttctca
       61 agctattgtt cttttttaca ctgcgtttgc acactgcagt gcatctgggg aatttcagca
      121 gtcggaatat acatgaaaag agacccgctc tactttcata aggtccctgg atgaattgga
      181 cgaaacctca aggccccatg gtggagccag agccgcattc atattccttg ccatcaccac
      241 acatatgata gcatgaagcc cagaccaatc gaaaacttga cagtaagcct tttgattttg
      301 cggggaagcc ttcatcaagc tgagagaggg aagggaatat agcccaaact ggacttcata
      361 ctgtggcaag tttgaaatcc cagcccaacc acagagctgc ttgattggaa tagttggaaa
      421 ctgtgtccag gaattcggca gcaagagctt ggctttcagt tactcctgcc tttttaaagg
      481 aaagctcacc atacaggtca cttagaagct ttatttattt tgtcgggatt ttaaatatgt
      541 acactctcgc gtgtgtagcg tgagttggct gctatacagt tctgttccac aggagctttg
      601 tttcttaccc tcgtggtgga acactcttgg ctaaagctgg cacactttga cattgtcttc
      661 tacgctgttt cattatttgg tccttaaaga aacagaaaa
//
LOCUS       KCPA01000560             498 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 61434tic ultra-conserved element locus
            uce-6592, sequence.
ACCESSION   KCPA01000560
VERSION     KCPA01000560.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 498)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 498)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="61434tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>498
                     /note="ultra-conserved element locus uce-6592"
BASE COUNT          170 a           82 c           88 g          158 t
ORIGIN      
        1 tttctactgg gtaaacataa acaaaatgaa atgccttact ctgaaacaat aaaaaatctt
       61 agaacttttc cagcaagacc tgtcctattg tgtgtagagg ggcatggggg aatataaaac
      121 atttagtaaa caaaacataa agcatcttta acatgaataa tcagaatgct tttaaattgt
      181 tttgttgcaa ctataaatca ctataatcag tgcaatcact cagctctgac atccattagc
      241 cgcttggtta cagcaaatta acaaagaaga gagaaagtga ttcattatct cattcctgtt
      301 aatgactatc agatgcattg cttaattagg ggatggccat tgtagtagga agaaggtcat
      361 atgcctttcc acaaatcttt tcactcgaag tttaagtcct ccataataat gctcgtgttg
      421 aatggagtaa gttattgaca tctgtcataa ttttgtggat attagtagtt accagttgcc
      481 aaacttagta tttgtaag
//
LOCUS       KCPA01000561             633 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 61543tic ultra-conserved element locus
            uce-5185, sequence.
ACCESSION   KCPA01000561
VERSION     KCPA01000561.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 633)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 633)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="61543tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>633
                     /note="ultra-conserved element locus uce-5185"
BASE COUNT          201 a          135 c          113 g          184 t
ORIGIN      
        1 ctccctcaca ggaattttac ctattgacat tgccactgtt ctgtatgttt ggtttggctt
       61 gcaacaaata catttacctt tttaggtata agtaaagaaa caaagttagc tattagataa
      121 cagttcttgc tgccaaaagc cataatctga cacagattga gcctggtaca gtagtcaatt
      181 aatggctcag tgctcataca ataatgacct actaacctga cggtgtgttg ctctcacatt
      241 ttgctgtccc ctgggatgcc actgtcactg tgttatctat tgcctgcttc cctatcaaag
      301 aaaataagca gagctgaaat gtatgtacgc atcaagctct gtagttcatt gcacaccaac
      361 cccagcaact ggaggaacaa tagatttata agtttatcct acattaaacc aaacatgcct
      421 gactgcactg taaattacta aataataaac caggtggtgt aagatcctga cttggacaga
      481 atataaaaat ctatcaacct gtaaaataca ataaccataa acgtgctatg tagctgatgg
      541 ctcaggtaaa ccatccacct ccagcagcag aggttttgct ggagtaaatt gcaacaaaag
      601 gtttactaaa tttaggtctg gagcactttt tca
//
LOCUS       KCPA01000562             346 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 61649tic ultra-conserved element locus
            uce-7136, sequence.
ACCESSION   KCPA01000562
VERSION     KCPA01000562.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 346)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 346)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="61649tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>346
                     /note="ultra-conserved element locus uce-7136"
BASE COUNT           96 a           90 c           57 g          103 t
ORIGIN      
        1 cctgggcaca caaagccagg gctgtaattc aatgctcaat ttacccttgt ctcagtggag
       61 accccgctaa ttgatagaaa ttaagccatt aatcaaggca ccagccatca ttcaacccgg
      121 ggaagatgaa tccaaacttt catcataacc accttcccca ttttagtgtt cattagcatt
      181 aatttttaat gcaattatgc tcttctttta cgctgagctc ataaattact tttgttgctc
      241 gctggccttg taaaatccaa ggtaatgctt tgtgctcaga tcttaaaggc aattactgcc
      301 tgcttcatac ctctatccca gaggtacaga ctcacggatc ccacac
//
LOCUS       KCPA01000563             686 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 61758tic ultra-conserved element locus
            uce-4688, sequence.
ACCESSION   KCPA01000563
VERSION     KCPA01000563.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 686)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 686)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..686
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="61758tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>686
                     /note="ultra-conserved element locus uce-4688"
BASE COUNT          219 a          113 c          108 g          246 t
ORIGIN      
        1 cacagaaatt actaactaat tgaactactg gtcttttatt gtttcaggaa gcaggacaga
       61 gtgtcattct tttatctctt aaatttgtca ttatcacata tcacagtttt tgagcaatat
      121 acgcttccta atagattaat acataaataa cccgcccagt aatgccacag tgggcaaaag
      181 tctttgaaat aaaaccacct gttttaatta gtattcagat tcatgcggtt aaaaaatggt
      241 aatcctcttg cagttatatg acatttttaa agctttgaat ttccatctgt atcttatatt
      301 atgatgtttc aggattgtcg tgagttaatt atgttaactt tggaaacatt gcctgcattt
      361 agaatgaaaa acttcagctt gaatagccag gaaagcagat gctatctttc ttgtcgactg
      421 ctttgttgtg tgatgccttg aaactttttt ataagattct gtctccaaaa ggaagtataa
      481 atctccattt atttgaaatg ttgctctaat ctaatcaata ttttaatata tttctcatgg
      541 gagggacctg aatgcgtctc aagcaaccaa agacacgaaa atctcttatt ttatgttgaa
      601 atcctcttgt tattacaagt ccattcacga taatttgtag aacaggaaaa atccatgtac
      661 tataaagttc taaaattgtt ttgaag
//
LOCUS       KCPA01000564             581 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 61868tic ultra-conserved element locus
            uce-7518, sequence.
ACCESSION   KCPA01000564
VERSION     KCPA01000564.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 581)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 581)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="61868tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>581
                     /note="ultra-conserved element locus uce-7518"
BASE COUNT          212 a          102 c           94 g          173 t
ORIGIN      
        1 ttagcacctt agtgaactca accactgaat gtgagaaatg agcacatgaa gtgtgaccac
       61 tcaacaggta ctgtgccatt ccatgaagag actgtgtctt cttgagcatt ttgtgcctgg
      121 tagtatttag acaatgtcta cagttaaaca aagaaattta aagcaatcat tcataaggat
      181 tgcatcaaca tcagttagca gaggaagatc aaactttatt gaaactgctt gcatacaaaa
      241 tatattgcac tataaccaaa caaatgtcaa cataaaatcc aatctgttgt agctaatatg
      301 tacagagaat attgcccaag agcagttaca ttacaaggtc agtctacctt ggttaattat
      361 ctacagtatt ttaaaccaaa cagcttacag atgatgtgtg caaggtacca atttctgttt
      421 tcaaatacta tacattccca aaataaataa ctagaaatca acattaatgt ttggcaatac
      481 ttttaagaca tttttatatt tgttaaatca tgtgcagttc gttgccagtt ttatatgctc
      541 acctgtatgc aaggaagaaa gcaaagaaaa aaatacatca g
//
LOCUS       KCPA01000565             679 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 61978tic ultra-conserved element locus
            uce-5914, sequence.
ACCESSION   KCPA01000565
VERSION     KCPA01000565.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 679)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 679)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..679
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="61978tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>679
                     /note="ultra-conserved element locus uce-5914"
BASE COUNT          223 a          139 c          111 g          206 t
ORIGIN      
        1 tgtatttcag cacaaactgt atctttaaag taatgacagt ttctctcatc ttttctaagg
       61 cactttaaaa ctacagccca gaaatacacg gacagagaga aattaaagca actgaagctg
      121 aaatatgcta cttaggaatc caaagtttgt ttacaccatt agaaggcact caaatatata
      181 tccccataaa tgacaaggtc ccagcagcaa attaacagga acaattttcc catctcagga
      241 gctgtcaaga tgggctctgt tagccaattt atcttactct agcacatctc tggtgcttgt
      301 caatcaatat gtgaaacatt tggtgttgat tgccattttt ctatctactt ccttttgcct
      361 ctcgtaccag gcaatttact gcaagtcaat caaggttgaa gcagaccttg tttaaataaa
      421 acactgttga gttcttttca caccaacaat ttcaaaaaca gaatgagctg tagctcttca
      481 catttacatt tatactgctt tttctcccaa atgccatgct caagctataa gtcataacta
      541 aactcagccg aaggcttatg gagaaatcag tcaaggaaga tgaactgctt ttgctgtcat
      601 tcaggctatc aatggagaca gacaacatta aagagtactt aaataatctg ggattgaaaa
      661 atgactactt gtttgaatt
//
LOCUS       KCPA01000566             638 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 62086tic ultra-conserved element locus
            uce-7463, sequence.
ACCESSION   KCPA01000566
VERSION     KCPA01000566.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 638)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 638)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..638
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="62086tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>638
                     /note="ultra-conserved element locus uce-7463"
BASE COUNT          220 a          118 c           95 g          205 t
ORIGIN      
        1 cacaaaattc agcgaggaga tgctgtcacc tcttcacttc tcctttcgtg aagccacaca
       61 taacacaaag ttaattaaag cctctattct gaaaggaatg ttccatttgg taaatttaga
      121 aacagctggt tagttttatc cattactttt gtgctaacat cagttgagct cattcagctc
      181 tctcttttta tgaagctgtc cttcctatgc tacctgatag ctactaattg ctgcaactac
      241 atttctgaat tgcaaatttt ctgcactgat aaaaactttg attgcctgtc agctacacat
      301 aaggaaaaga tcaccagtgc taaatgaggt gttccacgct tggataataa tgcctaatga
      361 attattcaaa aaagaatgct tgaatgaagc aaacaatttg aagggttact agcagccgta
      421 acagttcaac agccaaaaga acaaaagtat catcctgaaa attacactaa tgattaaaaa
      481 atgcgtatta attctacatt tggagaaaaa agaaatgcca atctgatttt aaaggttaat
      541 cattattttt tcactaatgc tctaatctct gggaaaaata ccctttacca atattttggg
      601 acatataata ttatgacata acatatttat ataatttt
//
LOCUS       KCPA01000567             589 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 62196tic ultra-conserved element locus
            uce-1564, sequence.
ACCESSION   KCPA01000567
VERSION     KCPA01000567.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 589)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 589)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="62196tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>589
                     /note="ultra-conserved element locus uce-1564"
BASE COUNT          179 a          118 c           97 g          195 t
ORIGIN      
        1 aaaaatttca tatcagcaaa tggcataatg ttatatttat attaattgga tattctgggt
       61 ttactgctcg ctccattggc accacataat atacaatcta aaatccatgt ttgtgcacag
      121 tgtataattt aatgcatgag atacagaaga tcttccagct tttaaacaac aggagggaaa
      181 cattttccat gctcagtttc tctgctattg gaacatttgt tttttattct gaatatttca
      241 gcacatctat ttacctggca ctatatttag taccacagta ccaagatggc atatataaag
      301 attcaattgc aattcccatc tgatgtccct tccctctcct ttttaccccc ttttttatgt
      361 ccgcactctg aattcagcac aaagttggtg tgtttaattt aaaaagaagt aaaacgcgcc
      421 aggagacgcc tcagaccact gcaaatcacc tactttatag aggcagtaaa attgtgtatc
      481 ggattaaaag tgatgctgat ctgaaattta tgataacttt taatggcatt ataccctgtg
      541 cgctccatca ccggatcgtt tggatgcaca gtgcagcaag atgaaattt
//
LOCUS       KCPA01000568             586 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 62309tic ultra-conserved element locus
            uce-1648, sequence.
ACCESSION   KCPA01000568
VERSION     KCPA01000568.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 586)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 586)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..586
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="62309tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>586
                     /note="ultra-conserved element locus uce-1648"
BASE COUNT          184 a          108 c          102 g          192 t
ORIGIN      
        1 ggtggtgctg aataagcatg cttatatgga atttctcttt gaaaagacca ctagttaggc
       61 cctataacac ttcagttgat atttccacag tgcaaacacg atagtggaaa ttaagttgcc
      121 ccagcaaatt cagtttagga gaaatttgtt atgaataaaa tgctgctgct ggccttagaa
      181 cattgaattt atccaccaaa taatatctta gaaataccac ttcagaagaa atcagctcta
      241 aataattgat aaatttggtt tgtttagaaa ccttttgacc cctgtaatag aaagtaaaaa
      301 cacatttcag ttattaaagt cacatatatt ccctctggta ggggaagctt ttaattttaa
      361 gctggtctct gttggggcca tttgataaag cttggaaaaa ccttttcaac tgctgctggt
      421 ggatttgggt cagcttccct tgggaaaatg gcaaaagata aatttgtagc ttttcataac
      481 acataagaaa acttcagaga ttttaaacat caagaactat tgaaactgaa agacagagtt
      541 tctcttttgt ttctccccat cctcctcctg ctccttcttc tctttt
//
LOCUS       KCPA01000569             309 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 62412tic ultra-conserved element locus
            uce-3914, sequence.
ACCESSION   KCPA01000569
VERSION     KCPA01000569.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 309)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 309)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="62412tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>309
                     /note="ultra-conserved element locus uce-3914"
BASE COUNT          124 a           47 c           56 g           82 t
ORIGIN      
        1 ttcagccaag gcagtcccaa tattttaggc catggattga agagaggaag gctgatctat
       61 ccatgtgtat tataaaaatc aagactaaaa ccaggcatca tttaatgtat tttaatagca
      121 aacttacagg aacagcacag aagacagaca acattaaaaa catgtacttg catgtaggac
      181 aactcagtta gaaaagtata gtgaatggat ggaatctact gtatgataaa aatgctacaa
      241 acagccattg ataagaaatt tacttgttta aaaaaatcca aatgctggca aaaatttgac
      301 aggtttatt
//
LOCUS       KCPA01000570             686 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 62524tic ultra-conserved element locus
            uce-2279, sequence.
ACCESSION   KCPA01000570
VERSION     KCPA01000570.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 686)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 686)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..686
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="62524tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>686
                     /note="ultra-conserved element locus uce-2279"
BASE COUNT          239 a           95 c          127 g          225 t
ORIGIN      
        1 aaagcccttg tgagttaaat ctctgagatg ttatcattgt atgataaatt taactgattc
       61 ctggtctgtg ttattggcac aagggagtga atcaaaggtg tttaacacaa ataatctaaa
      121 agaagcttct gtttttaccc aacaagatca ggtccacttt ctctatgatc agagtattac
      181 aaagctagta aagaataatt tatatcagaa gttctgtgat ggaatgaaat ggagctcttt
      241 tgaagtatga tctctgaaag cacagcatga agctcaaata aagtgaagga cattcgctat
      301 aacaagtaat gtccttaata atcttgttag tctagtctcc ctctgtaaga gacaaatgga
      361 acattattgg cttatgggct gtagtaaata atttagtttc caatattcag gctgctttga
      421 cagtaaatta aaatgacatg aaaggggctt gttgaataaa gaaagtatcc aatcaaattt
      481 aattggcatg actaaggcag tagaaatatg ttttataatt aaaccatgtt gtcttggagc
      541 tttataagca tgtatgaatc aaaatgtcaa aaattgttct ttgatattgt gcatttaaaa
      601 ctttgcatgg tgaatagttt tcttaaacaa ggttctagac acacatattg atcgaacatg
      661 aaaatagtct tagctttaaa taagtc
//
LOCUS       KCPA01000571             650 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 62635tic ultra-conserved element locus
            uce-5647, sequence.
ACCESSION   KCPA01000571
VERSION     KCPA01000571.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 650)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 650)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..650
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="62635tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>650
                     /note="ultra-conserved element locus uce-5647"
BASE COUNT          177 a          137 c          141 g          195 t
ORIGIN      
        1 aaagcagctg atttaacatg tgaattagac ttaacaattc cttctgcttc accccctctt
       61 ccccaaacac atttaaataa accaatgtct ttgtggcctc tgcaactgta attctgtgtc
      121 tcctgggggc acaaggttta ggtgaagaat ggagaccaca gacccttttg ggatgaggat
      181 tagctttaat cttgaggtga ttcttgcagt tgtaggactc tgtgttctgg ggaatgtgag
      241 ctgatggatc gttcctgatg ggactcccat gaaatactac cattgcaaaa cagattgacc
      301 ttggagccca caggagtcaa cttgatgaag agcttagttg gaactggagt gacaattgga
      361 agccaaatga atcatatcaa gtgtgaccat tacaggcctg aaaatgattc ttaattaacc
      421 actgatcctc tgtggtagca agtttccaaa atctgtgaat ccataaggga acccgtgaaa
      481 atataaaagt agcaatttac ctaatctaat agctctgctg tgctgcctct tcgacaacgc
      541 tttatttttt gtttcgtgtg ttagaagagg tcctcaggat cctgtcgggt ttggtgagac
      601 cgttgtaaac ttgcacaggc ttacccatat tttcccagta tctcccttca
//
LOCUS       KCPA01000572             499 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 62738tic ultra-conserved element locus
            uce-7676, sequence.
ACCESSION   KCPA01000572
VERSION     KCPA01000572.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 499)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 499)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..499
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="62738tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>499
                     /note="ultra-conserved element locus uce-7676"
BASE COUNT          144 a          105 c          125 g          125 t
ORIGIN      
        1 agcaggtcac atcttgcttc cggtgcatcg ggaattggga agcgggactg gggttgcact
       61 tggtatttaa agcaaacaaa cctatctatt aaatgagact cgaaagtaaa accgagagcg
      121 ttaaattaca gatgaagagt ccaaaatgtt ctcgttttcc taacgaccgt cgttatattt
      181 tgatgtggat aatacagcag aggttaaatg aaacatgaaa aagggctgta cattaaaatt
      241 gagatcttca gtgaagtgga acccagcaga tgtagctgca cactgtaatt gctgcctgtt
      301 tcctgtcact ctgattaagt tgcattgtcc ctgctccagg aatcagtggc ttcccatagg
      361 gcacagcatg ggacaactcg gcaggcaaat gcacctcctg cttgtaatgg tataatatcc
      421 attgatgact cctaaaatca ataggctgtg cagcgcagga ggctccgggg ctgccacggg
      481 agaggcactc cagtcaagg
//
LOCUS       KCPA01000573             494 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 62844tic ultra-conserved element locus
            uce-2126, sequence.
ACCESSION   KCPA01000573
VERSION     KCPA01000573.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 494)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 494)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..494
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="62844tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>494
                     /note="ultra-conserved element locus uce-2126"
BASE COUNT          132 a          104 c           96 g          162 t
ORIGIN      
        1 aaaaaagaat gtgagcagaa gtgcattgcc tcacctctcc ttttgatgca tatttcccat
       61 aactatgtaa ttttctgcca gtcatgattg tagacccttc agtatgtgaa acataatact
      121 tccctcgaaa ataaagcaag taatctgaca aactgcgttc ctcctctttt gtgggtcact
      181 cagtgacttt attttactga gggaacaagg ggaagtttat aataggatca gttttgtttg
      241 caatttgttt ctaatagatg ccaataagcc ggttaactag gctctagtta atggaaattt
      301 tattgtgttt ccccctgcag tgcacatgac cttttcttac aagagtttgt gattcttgaa
      361 aacatgtatc tgctgccttg cctcggggtc tgcttacaac agcagggata tgaccacagg
      421 ctcttctgaa cttgttcacc agccctctgc tttggctaga ccaaaatact ttgatcatcc
      481 tgtcagtggg aaat
//
LOCUS       KCPA01000574             636 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 62952tic ultra-conserved element locus
            uce-2922, sequence.
ACCESSION   KCPA01000574
VERSION     KCPA01000574.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 636)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 636)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="62952tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>636
                     /note="ultra-conserved element locus uce-2922"
BASE COUNT          233 a          103 c          120 g          180 t
ORIGIN      
        1 tccagaggaa atgaacacat atcatgctct tagaccaagt acctttgcac aattaatctc
       61 tacactgtcc tttcctagca acccaaagta ggaaatatat ccagtcaaag ctaaacagct
      121 agcaggtttc tatatttaca agaatcaaag cagttaaatg actcagctgc ctcctaatgt
      181 gtgttatatt tgaaattggg gagagtgggg gaagaatgga acattattgc tttaacaagg
      241 tttactgcta aactgaacat atgttgctca taatgtcact ttctaaatca atgaaattat
      301 cattatagaa catgtcgaca aattagacat gtaaagtgca agctgtatgt gggagagatg
      361 taatttggct ctataaaaag aaattaaaca ataaaatatc aatgacagat gtagttagct
      421 aaaggttttg aggtttaaat accaatttgt gaaaaaaaat tatgcagacc caatcagggt
      481 acaagataaa aataccagcc ttcatgcaac aagatgatta agtatttgga ccagatgttc
      541 gaagacctta gatgtgccct ttatttaact ggcaagcata ctggcaagtc cttaaatttg
      601 tgaaatccaa gtaatgaagg atagctcaga tggaag
//
LOCUS       KCPA01000575             436 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 63063tic ultra-conserved element locus
            uce-5172, sequence.
ACCESSION   KCPA01000575
VERSION     KCPA01000575.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 436)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 436)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="63063tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>436
                     /note="ultra-conserved element locus uce-5172"
BASE COUNT          141 a           83 c           75 g          137 t
ORIGIN      
        1 ttttctccaa gccttctgag acatgcatgt cctaatgtcc cttttctgcc tcctctgcta
       61 ttgctatttt cttttgctga caggcccgac attaagcatt tgcaggagtt ttcatatcga
      121 tagtatgtta ttttgccatt actgaacagt ttggggcttt gtggctagct accatgacaa
      181 tagatgcaca gcctggaacc agttttagtt aattagagtc aatcaatcca aactttgcta
      241 acttactcat gtgaaacaat agtataatga accaaagtct gcaagatgat tgggaaacac
      301 aaattattgc accctgataa attaaatgtg actattgcaa aatcttcctt ctaaatgaat
      361 actcagagag agaatgtatg ggtgaataag cataatttaa aataaagaaa aaaaaagaag
      421 ctgttataac cccact
//
LOCUS       KCPA01000576             677 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 63170tic ultra-conserved element locus
            uce-4521, sequence.
ACCESSION   KCPA01000576
VERSION     KCPA01000576.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 677)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 677)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..677
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="63170tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>677
                     /note="ultra-conserved element locus uce-4521"
BASE COUNT          206 a          108 c          134 g          229 t
ORIGIN      
        1 ttaatggtat tcctaatgtg tactgcaaag atggctggat gcctgttttc cttcaattga
       61 aacatttcct taatctgagg tggttatgga aacttaagtg caaattcact tccatctcac
      121 atacaatctt atattcatta acataattta atttgtcact tgtaagagag ctgtaaatta
      181 gagaatggga aacacttgag ggttccgctg tatgtgctgt ttctgttatg tttaatatgt
      241 tgtaagacat tgtagagttt atctggagct gtttaaaaga aattgtaatg tacaaatgtg
      301 aatagtcact tatctataat atgggtaagt tttgttttgc ctataatagt agatgtttat
      361 aagaaagtga aggacaatgt ttgtcatttc ttgcttgcac aggttgcact attgaaaaat
      421 tgagattgta taaacctgtc cctacaagat aatgatcttg tagatgtcaa ataaaagtta
      481 ttgtactaac aagaagtgga gtcttgttta ggcaatcacc atattccact aacaagtctg
      541 tacaattgga attcaacagg acttggcatg ttccaggctg ctctaaccag gcttctgtct
      601 tgcggcccaa atctctcagc tgaactcgtt aatgaggcaa gaactaaact ctgttcaagg
      661 aaggctcagt tccagag
//
LOCUS       KCPA01000577             354 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 63277tic ultra-conserved element locus
            uce-5854, sequence.
ACCESSION   KCPA01000577
VERSION     KCPA01000577.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 354)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 354)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="63277tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>354
                     /note="ultra-conserved element locus uce-5854"
BASE COUNT          128 a           51 c           66 g          109 t
ORIGIN      
        1 aataataata tgacattaag ttaaacaatg tcttctggtc cacagtagca aaaagaatat
       61 aagacagttg cagtgccaca aatcaaacag aataaacaaa tctatactgc acttcatctt
      121 acaggacctg tatcgcccac tctcttcgga tgatatggat tcagtaggag actcagtgta
      181 aaagagaaaa tggaacaatg tttatggttt gtgatttgat gaaggtttaa catttttaaa
      241 gaaaatagct gctaatttac agtaatagtg aatcacacaa aagagttttg catatttaat
      301 attaacaaca tggggccaaa ttaattctag tgtgtggggg tattttttgg cttt
//
LOCUS       KCPA01000578             651 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 63390tic ultra-conserved element locus
            uce-2962, sequence.
ACCESSION   KCPA01000578
VERSION     KCPA01000578.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 651)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 651)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="63390tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>651
                     /note="ultra-conserved element locus uce-2962"
BASE COUNT          158 a          138 c          158 g          197 t
ORIGIN      
        1 agatgtaact ctggtgacca ttattacagt agaaggctct cctcattcat tatagctgtg
       61 gtcgggaggg ctgcacggcg tcacggaggc cagcatgtag cagctctggg ttagcctgca
      121 aggttttgcc agtgcaggat atgtacggat agagcggacg gcacagccgg ctcaagcaca
      181 tgcgcccctg tgtgcgtaaa ataacttagg tgtgcctttc tttctaatga aatgttgtct
      241 ttatttatga gcatgtgaaa ttctgaggag gagctcttac acttaaatga acctgtgagc
      301 agcccataga aaagcaagtg cctgcagcgc taataatgag aactgacaag gcgatcctgc
      361 tgtgtttatt tatgaccttc tgcctttgtt agctcttgtg agaaattcct ctctaaccat
      421 aacaatattg ctggagcttg gcactgcact gaggaatcct acggtgccct gaggccgccc
      481 actggcacgg gtacagctcg caacagattg gcacggttgt tgaaattttc atatgttttc
      541 ccacttaatt catgaggttg tttcctttgg tacatttgtt cattctgaca agcatccttt
      601 agaagtattt tgagattgca aagatctgac ttactaattt tttttggtga t
//
LOCUS       KCPA01000579             851 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 63504tic ultra-conserved element locus
            uce-4437, sequence.
ACCESSION   KCPA01000579
VERSION     KCPA01000579.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 851)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 851)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..851
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="63504tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>851
                     /note="ultra-conserved element locus uce-4437"
BASE COUNT          255 a          192 c          167 g          237 t
ORIGIN      
        1 accagcagca gagatgctag tgtttacaag gaaagtcctt ttaatccctt ttagaccaaa
       61 cctaatactt ttatcttcac ctttcaaagg agagatttaa caaaccttat ctctattact
      121 cattactttc agcagaagga gggactgggt tctacttgaa gacagcttca aagggataaa
      181 caacattgtc aaccatgata gtttgcttgg atcacactgt actgaacatt cattttaaag
      241 cagtggtctt gaaagggttt aaaagagtgt ctagtgaaaa gaatctgaaa agattctgta
      301 cttactcctc ggcctcggcc tctgcctgtt gatggtcctc caaaagcatc atagtttctg
      361 cttccaaatc cactttcagg ataagcaggc gttcctctcc cccgagagcc tacaggtgca
      421 ggcttcatat ggggtgaaga aaaactgctg taggaagagt aactctctct tcctctgtcc
      481 tccataaacc caggcctcaa ttttgaacgg gagtaaggtg cttcccagct agacccgccc
      541 tggtttctac ctccgaaaga gtcaaggcta ttccggtagg agttgtcaaa tcgaccacca
      601 taactacctc cgaagcggct ttgttcgggt tcattataac catagccaga tctgtacaga
      661 tctcgcccac ccagagaaga cccggagtcg taagactcat aaggtccaaa cctggaaaag
      721 ttgcacagtg aggagaaaaa aaagtaagct tactaatgtt atacatttca aaagacaagt
      781 tatcagttga catttatcaa ctaaaatcaa tttattacta tactgatctg tacagttgtg
      841 ttattgttta a
//
LOCUS       KCPA01000580             609 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 63609tic ultra-conserved element locus
            uce-1630, sequence.
ACCESSION   KCPA01000580
VERSION     KCPA01000580.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 609)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 609)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="63609tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>609
                     /note="ultra-conserved element locus uce-1630"
BASE COUNT          191 a          117 c          111 g          190 t
ORIGIN      
        1 ttaaagggaa atcacttgct ctaagccaga tatctgactt ttgacggcaa ttgtcactgc
       61 ctggatttcc ctttgacagt ttggcaaccc tgcacctctg ttattgtatc cacttatttg
      121 tcttgttttc agccagatta atccattctg ttttgacaag aagactgatg ggtaattgat
      181 aactgtgata gacacaaaca gaagagttgg atgctgaata attcagtact tttcagtatc
      241 agtaagagaa caggctgaag aatttgtgtc tctatttaca cttaacctaa actaagtcag
      301 cccagacatt tatgctgcca gtctatcaga aaaccaaaca gtgtacattc ggtttccaca
      361 cgacaaaatg ttttataagc ttgtaacaat atgtgtgaag ctgccagaat aataaatagg
      421 tacagcagcc catgcatgct aatgttaagt tgtaagcagt tttgttgaca agtgctaata
      481 cttctttcat actatcatca aaagcagcta ctacaacagc cattatttgc tgactttcca
      541 agcaagacat gatggattgt gaccttaata tgggttagcc aagttttgaa agttaaacaa
      601 cttgcaata
//
LOCUS       KCPA01000581             368 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 63715tic ultra-conserved element locus
            uce-7432, sequence.
ACCESSION   KCPA01000581
VERSION     KCPA01000581.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 368)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 368)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="63715tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>368
                     /note="ultra-conserved element locus uce-7432"
BASE COUNT          115 a           54 c           63 g          136 t
ORIGIN      
        1 ttaaagggaa atctatggtc aagtatgcct tgaagttctt caggttcatt aacaaggtca
       61 aaatcaatgt tattttactg tttggaatca tttttggcgg aacaatgaaa agaaaccata
      121 gtagaagtag tcttaatata atcattttct tttcattgtt ctttatggga aaataatttg
      181 gcccgaaatt tagtggtccc atcagggagg cgatatcttt aaaaaggtgg tctgaaggac
      241 aggttttact gtactttaat aggcttatag attaatataa atcttaatat tcataatctg
      301 tactctccct tttctcaata tctcgttcat ctatacatct atttgtaatg tgtgtttcaa
      361 acacaagt
//
LOCUS       KCPA01000582             730 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 63823tic ultra-conserved element locus
            uce-7984, sequence.
ACCESSION   KCPA01000582
VERSION     KCPA01000582.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 730)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 730)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..730
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="63823tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>730
                     /note="ultra-conserved element locus uce-7984"
BASE COUNT          199 a          151 c          186 g          194 t
ORIGIN      
        1 gttcaatatc tgtatatttc cggatcagta tcactaagct gatgaatttt actgtgaaac
       61 atacagcatt ccctgtattg gcaggcagga aaagagtcca tggtatgaat ctctcgtgtg
      121 tggaaagggt gaaaagagga tttctacaga aaagaccacg tgatgtggca tgtcgatgat
      181 taggcaaagt gtcccaaagg ttattttctc actcaaatag gaaggatctc cagctggaag
      241 tgcaagaaaa gggttaaatt tcggggctgt agaagcagat tgtgttttcc ttctatgatg
      301 tgggctgaca agacatcagt attctattca tctgttggga attaggctgt taatccaatc
      361 aatgactctt gagctagctg cagcctgcct ccccactggg gaacaatcgg atcagacggg
      421 agattgttta agagcacaga gcagtcccgg tgtcaggtgg aatttccaag cgttccctag
      481 tgaattgggg atgggaaagc tgtctcagcc catttatcct gccccttaaa taagcaggta
      541 tatgcctcag ccatgctaaa gtgataaagc agtagaggag cacaactttt atgcagggag
      601 ggggcagggt agcaccctga gaagagtttc agcatcctac ccttcggaat atcatcctgt
      661 ccattttgcc aggggctggt tcagccacag caccgtgaca cttgttacag atttaggcac
      721 tgacttctcc
//
LOCUS       KCPA01000583             346 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 63928tic ultra-conserved element locus
            uce-4590, sequence.
ACCESSION   KCPA01000583
VERSION     KCPA01000583.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 346)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 346)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="63928tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>346
                     /note="ultra-conserved element locus uce-4590"
BASE COUNT           99 a           69 c           71 g          107 t
ORIGIN      
        1 tcagttgtcg tttgcctgtt ttctctgttg cctggtggaa aggactggcg agcacagatg
       61 cccccaaaag gctgcacagc cactaattag catatatatt gtttgtcctc gtacaaattt
      121 atagcaaaca gcaatatttt acactccagt aaagttaata aatgaggatt taggctataa
      181 aaatttcatg ttcttttgtg caaaggtcaa ttataaatag ttaagctcag attcatccaa
      241 aagctctgag cttcagctag aacgtgtttt ggtcactctg gtgctggaca aatcacagta
      301 cctgagacac ctctctgcaa cagtgtagag tgattttggc tctgag
//
LOCUS       KCPA01000584             701 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 64038tic ultra-conserved element locus
            uce-6649, sequence.
ACCESSION   KCPA01000584
VERSION     KCPA01000584.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 701)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 701)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..701
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="64038tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>701
                     /note="ultra-conserved element locus uce-6649"
BASE COUNT          220 a          139 c          112 g          230 t
ORIGIN      
        1 aaaacattta ccattttgtc attcttgttt tcacaagggt gtaatgatta cagtataaca
       61 aaagctataa gtcattaaaa aatatgtgat atcctttgca tatcaagggt acttttctta
      121 tgaataagga acttttcact gtaagaagac ttttatatga ctcccactct atttccaggc
      181 taaatttact gtaaagagag aggttttgca tctgcctatg tcagttcttc agtgtattga
      241 ggtcagcttc cattctcctt ggctctgatg cctgcctgta taaacacaaa ttccatttcc
      301 atcctattat ttttctaatc aagggtttgt catgcaaaag aagatctgag gtgactgtgt
      361 tttccattat gcaaaacatt ccattatgat aatatcttca ggatagtctt ataaaggtgc
      421 cctgcccaaa gacatcacaa atgagagcac agaaatggta gacaaatcct gcataatttg
      481 ccctctcatt taacattcag gccacagagt tcaccctaat ttgccataca catttcctct
      541 gacatcctcg atctgtacat atggtaaaaa taagaattgg cagctttcac tgaatactgt
      601 taagtgctta tcaaagaaga agaaaaaggg ggctgtaaaa tgcagtcata tttagtacat
      661 tcttcattgc tttctctgct aaactcacac ttagcaaaat c
//
LOCUS       KCPA01000585             614 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 64150tic ultra-conserved element locus
            uce-3813, sequence.
ACCESSION   KCPA01000585
VERSION     KCPA01000585.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 614)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 614)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..614
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="64150tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>614
                     /note="ultra-conserved element locus uce-3813"
BASE COUNT          199 a          123 c          125 g          167 t
ORIGIN      
        1 tttcataaga gagtccccat tgcgtaagct tcttgctttt aggtaatgcc tatttcatct
       61 gctgtaaaga cacacatgaa gaaagggctg gcattagcca catatccata aaagcctagc
      121 agccaagagt attatcttta ttcagaagaa gcatagcact tttaaggttc agaaacatat
      181 ataaaaattg ggttctgaaa tggtcacccc tctgctatgc cattatagcg atcagccaag
      241 cttctgcaag gtaaatactt ttggaaaata agtggaaatt tgctgcaaat cagtcccttt
      301 tgtgcatggc cacaggagca tgttgaaatg tttggacact aatacccatt cattttcttg
      361 gctccataaa taaaagccgc cagctatgtg gcggccgtga aatggtattc ttcaggaccc
      421 agcaggaagc cccatcctta ttaccactgc agggggcagg acaggcccaa aatagcaaga
      481 caactaaatc aagacatttt caatgtctaa caaaatgact gtggtttaga gagaagcaaa
      541 aggttggaat tggacagctt ttatacttag cataatacct ttgttaaagg agttcagata
      601 agaaaatcag atct
//
LOCUS       KCPA01000586             501 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 64253tic ultra-conserved element locus
            uce-3529, sequence.
ACCESSION   KCPA01000586
VERSION     KCPA01000586.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 501)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 501)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="64253tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>501
                     /note="ultra-conserved element locus uce-3529"
BASE COUNT          145 a          105 c           96 g          155 t
ORIGIN      
        1 actcaggaat tctcagtggc tgcctgggat caactgccag gagattaaca ggggttttgc
       61 acagagtttt ctccttatag agtttcaaag atgtatgatt acattacggc tacctggaaa
      121 gagacattga ggctgaacca taagttgaca ggcttcaaag aaaaagttaa ttcctatttt
      181 cttttaccca caggtctacc cacggatagc gccggcattt tggcactacc tgcgggtaga
      241 agtgagtagc gggtatttga atactcccac atctttattt tacagcttgg tagtgtttac
      301 cgacctcctt ttgtccattg tgctaatgag cttccattct tcttctgtga atgtactaat
      361 tcatgttgag gttgctaacc caatatgcaa ggttaaagac ctgatatcta aaagatatca
      421 tacattctga ctatagcaca gaaccaaagt acagaaatcc atacatgcac ctccttttat
      481 aaacacattt tatattcatg a
//
LOCUS       KCPA01000587             323 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 64357tic ultra-conserved element locus
            uce-3588, sequence.
ACCESSION   KCPA01000587
VERSION     KCPA01000587.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 323)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 323)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="64357tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>323
                     /note="ultra-conserved element locus uce-3588"
BASE COUNT          104 a           71 c           66 g           82 t
ORIGIN      
        1 gctgtctccc cccaacgagc tggtgtttaa atcctacagt ctcactgtaa ttcttttctc
       61 cacataaaga tacattcaca gtagactcac cattggcgtc ttgtacttgt ggctcaccac
      121 ttctttagtt tcaggaacta aaaccggacg ggcaagagac aaaacaaaaa gttcaaaaaa
      181 cgagaggcaa atgggaaaga aatagcaaaa tgttcccatg ggaaagggaa gggatgcaga
      241 cagacagcag gtgcaggtac aggacacttc tcacttctat atgtttcttt tcatttatat
      301 atatccttgg aagacaccgg taa
//
LOCUS       KCPA01000588             628 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 64470tic ultra-conserved element locus
            uce-685, sequence.
ACCESSION   KCPA01000588
VERSION     KCPA01000588.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 628)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 628)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="64470tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>628
                     /note="ultra-conserved element locus uce-685"
BASE COUNT          190 a          126 c          124 g          188 t
ORIGIN      
        1 aaacacaagc aggataaact tcctgaaaca attctgtgtt ttgaggggcc ttctgcataa
       61 acaaagccag cagacagtta ttaaagactg tgtagctact ctctctctta cctttacctg
      121 tacatctgtc catctatttc tcatctattt ttacatttca ttatgctgtg cttgctctcc
      181 agctctcttc ttttcctttc ctgaagacac atttctatct ggcacagaaa ataaactcag
      241 attgcgggta gttatgttaa tctaattcaa tcctctgtgg gctaggagtg aaattctaat
      301 agtagagctg ttgagggctt ttttgttaat ggcttgggga ttacattgag ttaaaggctc
      361 atttcctaat caaacagaga gggagagagt gactccgaat atttatgagt ctcccagcgc
      421 gagttaaaca ttgaactcca aaagcaggat ttcagtgctg caagaaagag ttaaaacccc
      481 tcagggctgc tgtggagagg gaggaaacca gttaagccat cagcattttc aactgctgta
      541 taacttcaga aataatcatc tcacgagcta aaatggaaac tgtagcaaga tatttaaaac
      601 aaagtcaagt gatgcttcaa aaaggctc
//
LOCUS       KCPA01000589             491 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 64574tic ultra-conserved element locus
            uce-294, sequence.
ACCESSION   KCPA01000589
VERSION     KCPA01000589.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 491)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 491)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="64574tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>491
                     /note="ultra-conserved element locus uce-294"
BASE COUNT          153 a           82 c           95 g          161 t
ORIGIN      
        1 tttgtttcat tgtcagtagc actctggggt tatttgaagc acttatttat gcactgtaag
       61 cagaacaata ctgaagaaga aatgattaaa taccagctct ctgagcaata gacatctcat
      121 tgtggcaggc ctagactcac cactgggtgg ttttgataaa ggcaatatga gttgataact
      181 gatacagttt gccagggagt catctgggga tgctgacagc tactatgctt taataaaatc
      241 attagaatgt aaatgttttt attgcaaaat aaagagcctc cagcaaagtt gacactatcg
      301 ctgctccctc cactgaatga aagcaccgat tagcattcaa atgatataat gatagtctgg
      361 ttatctttat taaaattttt caaatcgagt cttcattttg catgattgag ttttaaacaa
      421 atgcaatatt cagtaggctg gtgagtcagt ctgaacactc ttgaaataat taaagtgtgc
      481 cttttatttt t
//
LOCUS       KCPA01000590             628 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 64687tic ultra-conserved element locus
            uce-115, sequence.
ACCESSION   KCPA01000590
VERSION     KCPA01000590.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 628)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 628)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="64687tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>628
                     /note="ultra-conserved element locus uce-115"
BASE COUNT          173 a          134 c          138 g          183 t
ORIGIN      
        1 cttttgtgtt tctcccacta cctggaaatg cttttttgaa gatacaccca tcaccagtga
       61 ataatttgta gacctcatga ttcccatagg ccttccaacc ctttcttgtt tctaatttca
      121 aaggcccttt tgagtgggaa acaaaaggtt aattttctcc agcttgccca ggctgactta
      181 atgtaacaga aggcagcaaa ttgtattgat ttagtgacat gcaactgtcc agaaagagct
      241 atttatacat tattcaggac aaacactgtc ataatggaca aacagcagca gcatctggga
      301 tgttaatgtc tacaaataag attattcttt gaaaggatta ggacgaagca ttttgtgtaa
      361 ttagatttct cagttttagg aatgaattgc cttttagcag taaaagctgt cactgaggga
      421 gccattagct ccttataact gaattaaatg cataattagt gacatgatcg cattaggatt
      481 tgtttcattt ttaactaatc cagggccagg tcaccacggc ccacctcggc agggcccggc
      541 ctcagctggc gtgccagagt tgggaaaagt caggcgcgtg tgaacgggag ccggggcctc
      601 gccatggtgc tcgcgggcta ttcatcac
//
LOCUS       KCPA01000591             713 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 64795tic ultra-conserved element locus
            uce-7647, sequence.
ACCESSION   KCPA01000591
VERSION     KCPA01000591.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 713)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 713)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..713
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="64795tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>713
                     /note="ultra-conserved element locus uce-7647"
BASE COUNT          216 a          122 c          137 g          238 t
ORIGIN      
        1 tgatgttctg tggtgtgttc aaataatcga tagcagtaca agggttgttc cattgggatc
       61 acattatatg agtttataat atacaatata tgctttgatg tatacatgta gtgtttgctg
      121 ccccctctcc ttaaatacag aaatttctag ttgtgtttat tcccctcgtc agcatacttt
      181 atcatatcaa agcctttaca gacagtgtag aactactgag ttatgtttgg gtcatgtttt
      241 gcagtgtgcc ctttaatact gaagctttag aaatgcaatt ttcagcctct gcttattaga
      301 atatgataaa gtattcctgg tctatgtcca gctccactaa tctccagact acacttcatg
      361 aattaggcat gaagatttta gtcaatgtgc tttcaaagac caatgtttag ggaatcatgg
      421 attttctaca agctgaggga gaaatctata ataggaagaa ctgattttca aatatcatat
      481 tctgtagaaa aaaatgacca gttctggctt ggaaaccaga aacatttcct tttagaatac
      541 tcaagatctg gttaaagatg tattgaaaag gagtagcttt ttaaaatgca ctgtaggtgc
      601 tgtgtagtgt atagaagctc atacatactc gataccacgt agacaccttc tgagttgggg
      661 gttaaaaaac aagccacact tggcttggtt tagtggtatt aacctaaact cac
//
LOCUS       KCPA01000592             310 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 64903tic ultra-conserved element locus
            uce-771, sequence.
ACCESSION   KCPA01000592
VERSION     KCPA01000592.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 310)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 310)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="64903tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>310
                     /note="ultra-conserved element locus uce-771"
BASE COUNT          105 a           51 c           57 g           97 t
ORIGIN      
        1 tttttcagtg taataagccc aaatatgtga aatatgttaa atctaaacta ggtatacaca
       61 gaactctatg ccatgttatc aggctacaat gattatgact gtgacagaaa agaaaacgta
      121 aggccagtag catagctcat ttttattgtt taaacagttt ttgcatagga aatatatctg
      181 cttccagtaa ttgactgcag tatgagcagc tgctagcagt ataggctgga tataacagta
      241 acaatcacat taagtcaagc ttgatttaca ccagtttaaa acttgtggca gttgagttca
      301 cttgtaacct
//
LOCUS       KCPA01000593             721 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 65014tic ultra-conserved element locus
            uce-3031, sequence.
ACCESSION   KCPA01000593
VERSION     KCPA01000593.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 721)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 721)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="65014tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>721
                     /note="ultra-conserved element locus uce-3031"
BASE COUNT          252 a          137 c          110 g          222 t
ORIGIN      
        1 aaagctttat ataacctccc tatttggcct ttgttagtca tgctacaaag acttagaagc
       61 tttgaagatt gtcttaacta gatagagcca caagaacaac aatgcatttt cttccagtca
      121 ctgatcaggc ttctaaagag taactaataa tgtagatttt aaagtgcaaa aggcaacgtg
      181 aaaatattta atagtagaac taacagcaca gcataccttc tgcagaaacc tgtctgcttt
      241 actttccttt tatcaatatt gccaagaaag taaatttgtc actgtgcagt tgagaatctc
      301 tcaaagatct actttaatgt ttcacgctac gtttgcaaaa caagagtaat aaaaataatg
      361 acaccattat tactcttccc cctttgtttt cagttcatca cttgcatatt tgaataatga
      421 attatattca cattatctct acacttttgc tcttgacttc ctctgctggc tgaaagtaaa
      481 gctattatcc agttgtcagc tctgaagagc cattcaacaa agcagccaat ggtcctgaca
      541 tgtagatata ctactgtgca aaattatcta gagtacaatt tcaagctata tatgagaaaa
      601 ttaccagcca gcataaaaat gaaacttcag ctaaggtgaa atattaaaaa tttcatcagg
      661 gccactttag aacataaata agtagacaac agaattagtt gtgaattagg cacaaaaggc
      721 t
//
LOCUS       KCPA01000594             812 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 65124tic ultra-conserved element locus
            uce-7836, sequence.
ACCESSION   KCPA01000594
VERSION     KCPA01000594.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 812)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 812)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..812
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="65124tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>812
                     /note="ultra-conserved element locus uce-7836"
BASE COUNT          265 a          191 c          147 g          209 t
ORIGIN      
        1 gccacaagca caatagcccc actcttttta actaagcaaa tcctagagag agcagttttc
       61 ccccaaaatc tgggcatcag ctccaaattc agtgaactga tgtctcaaag tgttcacaaa
      121 aggtgcggga aatttgcaga ggggcacgag cttttccttt catagagaag tgtttccatt
      181 ataaaaaatg agagtgtgaa aaaatcctaa cacacaatag ctctctttca agtttaaagt
      241 tcagaattac atctcccaag tttcctgtgc gttaaaagac gaacacataa taatgatcta
      301 aaaatccttc acaaaaaacc aacaagcaag gatgaagcag tactcgcctg ggggccaatt
      361 gcctctccag cagcggtaag gctgttacta ggcttgcagt accatttgtt ccattacaca
      421 atctcctgaa gccttttaca gagagctaaa acaactgcct gtaccaacac gacacatggc
      481 tttccatccc gactctttgc taatccagac gctccaacca tctttcttta agatgccata
      541 tggttggcag aagcctgtag atctagcagc acatctgctt gtatgttact tctcccctcc
      601 aactcccccc tccacaccac aaaagagaga gcaaataatt attttacatg taaccaatta
      661 aactgcattt aaagaggacg gggattattt agctctagat agattgtcgc agaagatcat
      721 ttgtctctca gtgatttggg aaatacagag aaacaaaaca aagaaatgaa aggcacatgg
      781 gcgctgcatt tgaattattt aaatgactgc ca
//
LOCUS       KCPA01000595             765 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 65235tic ultra-conserved element locus
            uce-7844, sequence.
ACCESSION   KCPA01000595
VERSION     KCPA01000595.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 765)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 765)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..765
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="65235tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>765
                     /note="ultra-conserved element locus uce-7844"
BASE COUNT          208 a          162 c          158 g          237 t
ORIGIN      
        1 agtgtttcta attattgtct ggttacttta cacaggtatg tgtctgattt gtagaaagct
       61 tgcttagcag cacgactgtc attcaggatt tgcagaaaca gccttctatt atttggtagt
      121 ggtttggttt ctaaagggca ggctgtagac acaaacaaga gacgtagccc tcagaaacat
      181 tcatgcagca tccttcagga agggagggga ggttatccaa gtctccatgc tgctgtactc
      241 atataaatgc tccctctttt gttgctgctg gactccaaag aataaaacca aaacacaaag
      301 cgaaggcagc accactgagc aaatgccaca gtgtcccctt aatccatgtg gatcaaaaaa
      361 catgaacgtt ttgattctgt aaagaatctt cctcagcatg ctggattaat cacatggatt
      421 aataaaacac tgttgcactc actcagtggt gcctcttctg ctttgtgttt tcttttatta
      481 ttctttggag ccctgcagga acaaaagacg gcgtgtttat aagagtacca taggcactgg
      541 gaattctata aacctctccc tttataaggt atgcttgatc atacactgca gatttgttaa
      601 accctgtgct agtgtcccta tctgcctgaa atatactcat tttaaaccca tttcattgtg
      661 tttctgttta gttctgcaga gtgtggcaga gagcacatgt ggaatgctct catcttggag
      721 caaatacttt tgtgtaccat ttcagtcaca gtagagctcc tgagc
//
LOCUS       KCPA01000596             523 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 65343tic ultra-conserved element locus
            uce-3806, sequence.
ACCESSION   KCPA01000596
VERSION     KCPA01000596.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 523)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 523)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="65343tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>523
                     /note="ultra-conserved element locus uce-3806"
BASE COUNT          144 a          121 c          125 g          133 t
ORIGIN      
        1 aattaagaaa aagccttcat ggactgtgct gtcaagttat tggaaaacca aatttctggc
       61 tcctgagaca catcccaagt ggaggagcag ccaactccaa tcccccaaac tgctgccctt
      121 cagaaggtgc tctgtgtgtg tatgtgcttg agtgagagac atctgcattc cttttctgtt
      181 cacccagcca cagagcacaa atctactttg acacttttag aaaaatgaaa agatggaatc
      241 tcgcaggagc ctgcctgtgc cgaggagggg agcagccaca gcaggaggga agttgacttt
      301 tctttataca tatagggttt tttccatgca gagtttaaat tatgcctgat aaaaggagtt
      361 tcgtggatgt ttcagttctt tcaaaccctc ctggcttcct cccaattaaa tgaggtttgt
      421 caaagccaca gggctctgct gctgccagag aggcggacaa gcacttcccg cagtgacatc
      481 tccaatcccc aagggagaag atgaaagtgt cagtgctgag aga
//
LOCUS       KCPA01000597             839 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 65453tic ultra-conserved element locus
            uce-4993, sequence.
ACCESSION   KCPA01000597
VERSION     KCPA01000597.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 839)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 839)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..839
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="65453tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>839
                     /note="ultra-conserved element locus uce-4993"
BASE COUNT          233 a          173 c          145 g          288 t
ORIGIN      
        1 tcattgtgaa gcattgcact tttggaacat atagcccacc aatttggtgg taaacaagcc
       61 ttggctttaa gacaaagctt gttttaatct ccatgatcag gctacagatc tgaccatgtt
      121 ttttaacaaa cctcttatga agaaatccta ttcacgatta ttatctatat gagaataaaa
      181 atgtctaatt accttatttt aaatctgtat ttatcaattg tggttttctc tgggaaatta
      241 taatttgcag aaatgctcca cattccaggc tgtaacagtt ggaggtggat gtccttaagg
      301 atggaaaaaa agttcttttt taaatggcac atttactaat tataaaatgc tcttatctct
      361 ctgcagccaa agccaaaatg aacatgtgcc ttgcactaag aaatcccagg attgtcacaa
      421 cttgtgccag ctgttgaggt tatgacacct gtgccagcat cgccagctct gcccactgtc
      481 atctgttcca actgttccat ctgcactgtt tgtaccaatt ctcccatttc tgcatctgta
      541 ccttctgcag aaacgggtcc aacaatgcca gctgtgtcat cggtgccaaa tatgccagat
      601 gttctatttg tccaccctgg gccaaatcaa tgtagttttg tgctcattag ttttagctgg
      661 tagattctat ttcacaattt tttgagatgc acttagatcg aatcatttct aaatcactac
      721 aactgcttta catctatctc gccataaaca gaactttgtt tgttatctag tgtttggtca
      781 aaattatttg aaccttatta agttgcacgt gatgatttga gttctgtcat ggcaagatt
//
LOCUS       KCPA01000598             776 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 65564tic ultra-conserved element locus
            uce-1768, sequence.
ACCESSION   KCPA01000598
VERSION     KCPA01000598.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 776)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 776)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..776
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="65564tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>776
                     /note="ultra-conserved element locus uce-1768"
BASE COUNT          223 a          134 c          162 g          257 t
ORIGIN      
        1 cctataatag gagaaaagtg acagaccctt aactatagta gcatgaacag cactgctata
       61 attcctgggt gaactttgtc cctggatgtg tgtttttgga gtgtgccggg gtgacattca
      121 gcctctacat tcatttttat gataattcag agtaaattgt ggtgcaataa actcttcaag
      181 cctgtctttc ttgtgaaagc catgaatcaa tcagctgcag gcttttttgg gtcttttcaa
      241 tgtatagtga tcatttagat ttgacatgca ttgtgagacc ttggcttagc tcctctctat
      301 ggtctgtcat taattccagc ctttactgtt ctgaagtaca gtgaaggatg actgagaaat
      361 cattgcccct cttcagctct gttattgcac aaaatagcag cgcaataatt ttttgtcaat
      421 gttttactct aaaagctttc tacatcagtt ttgaaaagga agcaataaag cccattcaat
      481 ggtatgaata aaaatccttt gaggtttagg cgcagggctg cttttcttca gctggtaatc
      541 aaattggagc taaaatgaaa ttgagttttc ttatgaaaat agcctttgtt gctgggaagg
      601 ctggtaattc ataaacaata acctgctctt ttgtgtggat aataatatat tcatgttctt
      661 tcaatagggt aaaagccaga cctagtgcat tatggtacag taaaaatagc agaaggagct
      721 tgctggaata atcttgaaga agagatgtag cattcggtga cttaagcttt cagctc
//
LOCUS       KCPA01000599             534 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 65670tic ultra-conserved element locus
            uce-2965, sequence.
ACCESSION   KCPA01000599
VERSION     KCPA01000599.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 534)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 534)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="65670tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>534
                     /note="ultra-conserved element locus uce-2965"
BASE COUNT          155 a           91 c          107 g          181 t
ORIGIN      
        1 taattttata gaggtctact gaacttctgt tatttccaaa gtgttaaaaa tactcagttt
       61 gctaatataa atgattacaa ttgacagtgc attgtcaatc tattgcaaag ctgatttaat
      121 taagaatgcc aaggggcatc atttggggcc aggtatctaa gctgcaaatt tttttttgat
      181 ctcaacctct ccctatagga ccgtccacac tggcaccaaa ggctggaggg caagagaaca
      241 aagggaattt tatgtgtctg aattcaaatt ctttcccttt gaaatgaagc gtccagaatg
      301 ggcaataaaa ctgtgaaaat ggatttctgg ccgcatttga tgttaagcct ttagtgtcaa
      361 gagccaggtc ctctctcttt ccctgaatgg tcttgtgggg aatttgtcct ataaattatt
      421 tcttgcagtt tgtatgcata cggtatggcc ttgtctcata gatagaactc aaaagtaggc
      481 tattttgtgt gtgttttaat taacttgtat ttccagtaat attgcaatag aaaa
//
LOCUS       KCPA01000600             507 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 65777tic ultra-conserved element locus
            uce-4009, sequence.
ACCESSION   KCPA01000600
VERSION     KCPA01000600.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 507)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 507)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="65777tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>507
                     /note="ultra-conserved element locus uce-4009"
BASE COUNT          171 a          102 c           73 g          161 t
ORIGIN      
        1 attaaattac taagctacat gtaaaagcca aatttgcata gaagagttta caaacaaatg
       61 ctgaaaacat aatttcaaga aaaacttgca aaaatagcaa agtaaggtaa ttacctatct
      121 ccctttggtt ttcttttttg tactgtcttc cctttgggtc gtctttcact tcctaaacag
      181 gggctcccac cagggcctgt tacccgtatt gattcaaggc ctttggaaga tttcttaaaa
      241 gtaaattcca caggttctcc ttcttttagg cttctaaatc cttccatgta aagcttgctc
      301 tgtaaatagg aaaaatactc ttaaaaacag tatttacatt tataatcaat aggacaaatt
      361 atcccgtcta ccatcctaca acacatacaa gtagtttcct ctgcgtgagc tgtaggagaa
      421 aattatagtc ctggataaca ctaaacaagt aaaaagaacc tattttcagt cagcaaaacc
      481 aaaataacat tttctttttc tgtgatg
//
LOCUS       KCPA01000601             419 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 65884tic ultra-conserved element locus
            uce-7197, sequence.
ACCESSION   KCPA01000601
VERSION     KCPA01000601.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 419)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 419)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="65884tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>419
                     /note="ultra-conserved element locus uce-7197"
BASE COUNT           88 a          103 c           95 g          133 t
ORIGIN      
        1 ccccagtttg ggactttagg ttttttagtg aaggtggcca caagcaggtg cgtgctttac
       61 agagggtctc attctgcagc tcccactggc atccctggcc tcctgaactc ccttttgcta
      121 cctccttccc ccttttttat gaatgatagc ttttcagaac agcttgttgg gaaaaacact
      181 ctttgtgggg tcaaatccta cacatttctc tttcctatga aaggactggt tctgtgttgc
      241 aggtatgacg tacgtgtgga cccccctccc tgctggcttg tgataaattt gctttttaat
      301 ctctcgccac aggtgcttct caattaaaac ccactttgtt taaaaactca gggcttgttt
      361 aactgagccc ctggggagag ttgtcagatc ccaggatagg tgacacaaat aggttggtg
//
LOCUS       KCPA01000602             753 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 65996tic ultra-conserved element locus
            uce-1209, sequence.
ACCESSION   KCPA01000602
VERSION     KCPA01000602.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 753)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 753)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..753
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="65996tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>753
                     /note="ultra-conserved element locus uce-1209"
BASE COUNT          238 a          149 c          110 g          256 t
ORIGIN      
        1 aaaaggcctc caaattagga tactgcttca ttaagctttt gacatttgtc cagttaaaac
       61 tattgactca tactttcgtt tcttccccct caaattacta cagtgccaca gctgatctaa
      121 ctatattttc catttcttat aaatagccac aagaaaagta ttaattatcc ttgtacgatt
      181 taatgcacca actgccttaa cctttcaggt ttccttaaac accagcataa caaggcatat
      241 ccatggcagc aaatgtgatt tatgacagga atctttaatt tctgttttta aatatgttac
      301 ccaccgatct gcatacattt aaattcgcct gcaacacttt tctctgtctt gaggctgttg
      361 tttaatattc aaggatgatt tttgtccaca tacattttgg tctatgtcac ctcagattaa
      421 attattactg tttgcagcct ttttggagca ggcctcaggc ccttatttac aagaatcaat
      481 gaaacagtaa tgaaaatcca tttttcatac tatcagctct ggcctgcttt tatttagtta
      541 gctgtgtcta agcaagcaat tcattttgtg caaatgtcac gttgataaaa caggacgagc
      601 caccaaaggg ttaatcatga aataaagcct ctgctttagc aaagcacatc tgtaatggca
      661 aaattaaaaa aatattttct taatgtatgc aaagtaatgt atattgacac ataagcaagc
      721 cttttcatga tgaatattga aatatatatg caa
//
LOCUS       KCPA01000603             568 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 66105tic ultra-conserved element locus
            uce-7488, sequence.
ACCESSION   KCPA01000603
VERSION     KCPA01000603.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 568)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 568)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="66105tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>568
                     /note="ultra-conserved element locus uce-7488"
BASE COUNT          165 a          134 c          113 g          156 t
ORIGIN      
        1 aagccaccga ttctgaatga cagtgcacga acaggcaaag gggaatgcat ctccttccac
       61 acacagaatg gccttaacaa tgcctgcccg aggacccatt ttgtcatgaa ggagaatacg
      121 aaagacaaat tgttctatgt ctcagtaaaa gacacagaca atcacaaata attctaaatc
      181 ttatctagtt gaaaactgac cttccttagc ttgaaactgc ctgtaggagt cccaggacag
      241 gttgttctga cattctttta acatcgtttc atcagcacag ccaaaactaa tcacaagaat
      301 attacccgat gacaggtgca tttattctgt caattaaatc agatggttaa atcgaaatgt
      361 gccccaaatc tctcttgttt gcattatcca tattggcatt tcttggctgt ggttcattgc
      421 tggctggaag tcatccagcc cctgcagagt cactttgcag tcctgtgcca gtgagtttcc
      481 aggctctgca ggttacgccg agaccagagt ggtcctacag gactgacctg caatcttaca
      541 ctgcttcact aagatttatt taagggaa
//
LOCUS       KCPA01000604             403 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 66216tic ultra-conserved element locus
            uce-1245, sequence.
ACCESSION   KCPA01000604
VERSION     KCPA01000604.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 403)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 403)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="66216tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>403
                     /note="ultra-conserved element locus uce-1245"
BASE COUNT          135 a           80 c           74 g          114 t
ORIGIN      
        1 ttttttttgc ataatattta cctcaagctt gcttcaggct aatgtctcaa taatttccac
       61 tcctttctca ggtccttacc acaaaggact tgactaatga tccatggaca aaatgaagca
      121 tttaaattta ttcattaatc attcatctcc agctcattga aaactttaaa cttccacaaa
      181 attaagatag aacattgagg agtgattgag ggagacagct ctcagagagc taaaaaagac
      241 tggtaaacac aaaaacaaag gtacattaga cagggtgtct gcacatgggc ataggtattg
      301 ttccagttta cataaacttt aagtactgaa ttgcaaagcc tttatttggg ccaacacagt
      361 ggggaaatct ggggaagcgt acagtcactg tcaacaccgc cag
//
LOCUS       KCPA01000605             463 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 66320tic ultra-conserved element locus
            uce-6610, sequence.
ACCESSION   KCPA01000605
VERSION     KCPA01000605.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 463)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 463)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="66320tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>463
                     /note="ultra-conserved element locus uce-6610"
BASE COUNT          145 a          105 c           70 g          143 t
ORIGIN      
        1 tctctggatg gtgtttcaca tgtggctatc ttggtgcagg agggctcagt ctccgtgtag
       61 gaatgctgtc tcccacatgg ctccactgaa ctcatcctta acgatctatc cccgcttacc
      121 taacttcaac actatttttc ctgagactgc attaatgaat ccaataaata aagcattgta
      181 tcacccatgc agtatagaca ttaattttag aacaaaacat taatcaattt aaatttatgt
      241 actaatgcag acacaatcaa tttgaacttc ttatgacaat taacaaagct tttgctacat
      301 ccctaaaaca cactgaccca tcaattatgg tttgcatcaa actaatgcta atagtacttc
      361 cttcttcctt aggctgtcag cagcctacct gattggtcag cttcaacgca gcagatcaat
      421 taatataaat tatacatgca cggaaagatg ggttaatatc ata
//
LOCUS       KCPA01000606             579 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 66537tic ultra-conserved element locus
            uce-5722, sequence.
ACCESSION   KCPA01000606
VERSION     KCPA01000606.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 579)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 579)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="66537tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>579
                     /note="ultra-conserved element locus uce-5722"
BASE COUNT          171 a          103 c           78 g          227 t
ORIGIN      
        1 tttttaatag ttaaagcaat ggaagtatgt gaatagttac ataacctttg taaaatttta
       61 atgtggacat tttgtcttag cttcttttcc tttaaaaatg agaatataaa aaaggtggcc
      121 cccaaaataa atgaaactca atttcacggc acattatctc tctcaattct ttcctctcag
      181 ctttcatttt cattaaaatc acagacaacc ataaattaat aattacttca ggttgactaa
      241 atgcaggcca cactatttag ctctcgtttt cctacagtgg cccttcttgt tcatgctaga
      301 aaaatgttaa tttagataat gtggcttgcc ccttgtcata taattctgtt ttgcagtttc
      361 actgatctat aatggtctct tctgattagg aagtattaac tttatctttt gttcaatcat
      421 gcttcactgt ttcctttgac tagataacta ttgtgaaata tcagatgaaa tgttctacta
      481 tctatatttc tgttatattt tgatttatct ctatgttgta acagcgttca gcaacatttg
      541 taatttcttc cagtaataaa tttattggcc attagccca
//
LOCUS       KCPA01000607             372 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 66637tic ultra-conserved element locus
            uce-5971, sequence.
ACCESSION   KCPA01000607
VERSION     KCPA01000607.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 372)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 372)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="66637tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>372
                     /note="ultra-conserved element locus uce-5971"
BASE COUNT          108 a           60 c           65 g          139 t
ORIGIN      
        1 attcattttt aaagaccagc gtgtacaaac agtattgcat tttggtttgt tgattgataa
       61 ttaaagagaa ttatatctac actcagtgta catttaaaaa attgttacat agttaatgtt
      121 aaaaagtaat atttggatca atgcctccta tggatttttg tagattttct cctcactgag
      181 gcatgcagtc aatacctaat ttctctggag atttactgca cttaacgtat tgaggtcctt
      241 ttaaatactc cagtcctgtg cactgagtat gtaagcctag ttttaatttg ctgtcattga
      301 tgaacataag aatatgaagt gtctgtgctg aattccctcc agcatgtatt tgtgtttgcc
      361 atcgatttca ag
//
LOCUS       KCPA01000608             614 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 66744tic ultra-conserved element locus
            uce-5095, sequence.
ACCESSION   KCPA01000608
VERSION     KCPA01000608.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 614)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 614)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..614
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="66744tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>614
                     /note="ultra-conserved element locus uce-5095"
BASE COUNT          207 a           93 c          101 g          213 t
ORIGIN      
        1 aaaatcattt tgatgcatta tgaatcacct gtaaaagaat aagtgaggac attctcaatt
       61 ttggtaaata tttatagagc caaacaatat gaagtatatg taacaatcaa atttctagtg
      121 aaaatgtgtg caagaaggtt tattttgaaa ggaaaattcc tactcccagt gtcataccca
      181 attaaattct ccaggtaatg accccatttg catagagagc tgaacccaca agtgggaatt
      241 ttaatgggca cagcacctga gtacattaat tgagagtgac actacttgaa ctagttttgt
      301 gcttacccca ctgaaaattc tactcatatt atttttaatg tcaagctaca agtcaaattt
      361 caagatgatg gatttgttct tttttaagca ttgaatttga ataaaaggcg gctttaattc
      421 tgttatgcat tgcatagctt taactaatat gtagttctga ttctcaccca gtgattggaa
      481 tttaatttta ttcattaatt tggaaataat tagatagaaa ataatgcctt ctgcagctaa
      541 attacttctg gattgctgtt taatgtactt taaccagaat atgtgttaca gttaagctga
      601 cataatagtt tact
//
LOCUS       KCPA01000609             522 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 66851tic ultra-conserved element locus
            uce-7025, sequence.
ACCESSION   KCPA01000609
VERSION     KCPA01000609.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 522)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 522)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="66851tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>522
                     /note="ultra-conserved element locus uce-7025"
BASE COUNT          147 a          113 c           66 g          196 t
ORIGIN      
        1 ttttctgtcc tttaatccgg taattgtttt attgctacat taaaaaatgt aaataatcat
       61 ttcccctccc tgtaataaat tagaagcaac ctgtctagct ctgaaaatta acatttcaat
      121 atcttcagtc acacaatgac atcatatcaa tatttaaaaa cattttatgc atgtattcca
      181 ggttgtccaa cttcattagg ggcattcatc agccctccgg ctacagtgta ttcccattgg
      241 agttgtaggc ctcaggccct accaaacaga aatttaaact aacttgcctt tttaattcac
      301 attattctca aatattctcc tttttaaccc cctgccatga ctaaggtgtt tagtggctat
      361 gatttgtgca catcaacatt taacttttta tgtcagagta cttgtaaata atttctcctt
      421 taatttccct cttctctcct atccatcact atttcctggg tgcagtaata actgtacttc
      481 ttttaatgtt ctatgctaac ttaatttgag atacaggttg at
//
LOCUS       KCPA01000610             393 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 66954tic ultra-conserved element locus
            uce-3999, sequence.
ACCESSION   KCPA01000610
VERSION     KCPA01000610.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 393)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 393)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="66954tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>393
                     /note="ultra-conserved element locus uce-3999"
BASE COUNT          104 a          107 c           78 g          104 t
ORIGIN      
        1 cgctgtaagg agattaaagt gacataaacg tcccgagtgg gaggagggag ggcagagaat
       61 tcaggtcacc cccatccgtc ccccatttga cagccgctat atcgctatcc aatccaataa
      121 aaaaatcccc cccttttgct ttaattaatt ttacagctag cttgcttaat tactttcaat
      181 caaaatcctc ctgccatcgc aaaattagag atggttgagc tccattagcc taaattcttc
      241 atttccatat agaaagaggc tccctcggca aagccaacag ggctccctcc tattctagct
      301 gccatcggac agatgcctgt gcctgtgtct gtcttccgtt ccttgggaga aggaaggcag
      361 gaaagataca gtcttgttcc caccttcccc tta
//
LOCUS       KCPA01000611             675 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 67066tic ultra-conserved element locus
            uce-2713, sequence.
ACCESSION   KCPA01000611
VERSION     KCPA01000611.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 675)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 675)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..675
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="67066tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>675
                     /note="ultra-conserved element locus uce-2713"
BASE COUNT          194 a          107 c          160 g          214 t
ORIGIN      
        1 aattttaaat tggtgtgtat tgcccgttca gtgcagtatt aaggacattg caacttttgc
       61 atttatgaat agtctcataa gtgtaacatt aaggaaattt gtataatctc taataataag
      121 gttaacatga tgcaccctaa gttttgtcct gcagtttgtt aaccaggaaa ggatagttgc
      181 aagctagcta tattgctttc ttcttagcta ctggaggctg gctgagcttt cagttattta
      241 cctcaataga aaactgaaag ggaaaaagtg aacaaaggag gtctgttttg cctgtcccac
      301 ttgctgggct gttgtctttg cccttttcag tgaaggaggg ggtagagctg ggtcagagtt
      361 gaagaacact gaaaaggaat tcaagtctta tattgaaatg tgaatgatag cttagtttga
      421 gtgccgaaca cattttctgt gggagcttta actgacagat ggtgatggac tggcatatag
      481 actgctagaa gttacagcta gatatgtgtt cagagcttga ttagatgctc agtaaataag
      541 tgcatatctg atgagacttt taatactgga gatactgatg ctagacactg tgtgacacac
      601 tagacatttg attgtgtgaa ttaagggcag acccctgcag ctggcataca ttcaggctta
      661 cttgtctagc ctaat
//
LOCUS       KCPA01000612             740 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 67177tic ultra-conserved element locus
            uce-7289, sequence.
ACCESSION   KCPA01000612
VERSION     KCPA01000612.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 740)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 740)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..740
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="67177tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>740
                     /note="ultra-conserved element locus uce-7289"
BASE COUNT          211 a          158 c          162 g          209 t
ORIGIN      
        1 agtctgccga cagacagcct tacgctcaca tttagtttaa atgcagtgcg gtatagtttt
       61 tcattatcat taacgtgctc ctggtgggca gagtgcaatg cagtggcact ggtcacactt
      121 cattgcttta tctcatatga caaagagaga tgatgtgctt cagcccaggc cagaagatga
      181 aagcgaaagg tggccacggc aaactccccc tgctgccgag gagccgcggc cgggctgcgt
      241 ctgtgacttg ctaacagcac gaaggggcag acaaatagat tttcctctat atttataacc
      301 agcatcattc ttcctttcag gcctttcagt gcaggtacct gttttatatg aaatgaacaa
      361 tctttataga cgtaccagag ccataacaag gctgattttc agcgaggctg aggtatataa
      421 ctcttacaga attgtcaggc ttcttgctca acaaatcaag cctaacttat gatgtttgca
      481 gtgtaatttt tattcctgtt tgactagcca actacccagt ggtaatagga tgttagaaaa
      541 gggcagtagc aatgtttgta catgccatga ttgataggca aactctgcat ttttcattta
      601 tatctcctga ttccaaatca gttaagttta ggaaaaatga aacaaaatgg caagaaaaat
      661 gcttgcagat tgcagcccgg cactctcgta gatctgagtt cagcccacat ctgctaggat
      721 tgtctggaaa cattaagata
//
LOCUS       KCPA01000613             620 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 67289tic ultra-conserved element locus
            uce-5013, sequence.
ACCESSION   KCPA01000613
VERSION     KCPA01000613.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 620)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 620)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..620
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="67289tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>620
                     /note="ultra-conserved element locus uce-5013"
BASE COUNT          151 a          141 c          172 g          156 t
ORIGIN      
        1 cttcaaaggt gtctgggctg gtgcctaagc aaactgtcct gtgaagttgc tgcctctgta
       61 ggtctaatgc ttgcaccctt ctgtttctta acagatggga caaagattag taaatgccag
      121 gttagcggct ccctcctgct gcctcagatt tgagttttgt cacttgggga ggagagcgcg
      181 gctggggagc tgggtgtggg gcgggatgtc agtttatcga tcgcacctca gtcaggagag
      241 ctgcgggcgc agcgctctga gcacgagcgg cagcgtgctt aatgtgattg aaaggcagtt
      301 aaaatggcgg tgaccttttc agggggaatt agattgcctg ccaagagtgg ttagagggag
      361 tgataacgcc agcttgagga agctgtccag tctgcttcaa aggcagggaa agcaagctgg
      421 cagcaagtac catttaaagc acgaaccgtg cggtctgata gaacagagat tgctgtcctc
      481 tttagatacg aaagaattga agaatggtag ctaacttctc tccacccgcc ctgccctcct
      541 cttctcccct ccagctaaaa aaccttcttc tagctcttct cagtttcttt tgcttaaaaa
      601 taacacagaa gagagaaaga
//
LOCUS       KCPA01000614             705 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 67396tic ultra-conserved element locus
            uce-2585, sequence.
ACCESSION   KCPA01000614
VERSION     KCPA01000614.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 705)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 705)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="67396tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>705
                     /note="ultra-conserved element locus uce-2585"
BASE COUNT          250 a          152 c          101 g          202 t
ORIGIN      
        1 aaaaattaat ctatactgta acgtcattta aaaaccagca ccaaaaagca aaacatacac
       61 tattattacc cagtacacat ttattgtatg ccagagctca aaaacagcta agaaaatgga
      121 aaagttgccc ctctacacaa atttgttaat ggggaacata atggtaagcc atgtttgctg
      181 gcattctgtg aaacatctac aaattgcctc tgcaaagcat tataggttgt cagactaatg
      241 cagttgaaga taatttggcc tttcagtgaa ttgaacctca cagcacgatt atactccagc
      301 accaagtaga gtgtcacaat tattctttca tgctgaatta ccatataatg tcataagcct
      361 acctgtcata agtcctgcag ccgagcttga attttttcta aatctatggt tcatggcttc
      421 taatggaaat ctgattgttt ttatcaacaa caaatttcat agcaaatcaa aggatatgct
      481 tggacaaaca atctgatact caaggttaaa aaacacacaa ataataaatt gctggtgtgt
      541 catgttcaat ttttactact gcattacact gcaataacca taacaggatc taaattgttg
      601 tcagaacatt aaacaaaccc ccttacttca caaaggcatc ctgcctgagt aattcacaca
      661 acggaaacaa ctatcacatt ttccactgtc ccaccaccat accat
//
LOCUS       KCPA01000615             650 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 67509tic ultra-conserved element locus
            uce-4626, sequence.
ACCESSION   KCPA01000615
VERSION     KCPA01000615.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 650)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 650)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..650
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="67509tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>650
                     /note="ultra-conserved element locus uce-4626"
BASE COUNT          143 a          179 c          168 g          160 t
ORIGIN      
        1 gtgcaggcta agagggtaga gccagggccg ttgactgggt acatgatccc agcccctctc
       61 cctgtttctg tggccaggga aggatggagt gatagtgcac cgctccctac acgaatctgc
      121 cattcagcgg ggcgaggtcg ggaaataatg aagtcagcac attagtgcct tgcctgctga
      181 gctcacactg ctgaaagctg ccggtgggtg aatttcccag cgtttggaaa ctttgtctca
      241 gttctgcggg tttgctcaag tgtgcgatgg ctgtttgcaa agggagcttt cccgctgggt
      301 gggtttgctt tcctcctcac ggctcaggga aggtgagagc cctccttcac gtcccccctt
      361 cccccattgc tgcccctcgc tcaccccaca aacacaaagc tcttacagcg ggttccctcc
      421 gctggggagc ttttccctct cccaactccc acactgggac atttttccac atttccagga
      481 ttacggccac tttcacttag atctatgtgt gttgcctcca catacaaaga agcacttggg
      541 gacgggatta gtaggattag aagagattca catatgtcca gttcaagcaa ttggtattca
      601 aagctttaca cttccaaatg ccaccaagag agagaaaagg aactgagggc
//
LOCUS       KCPA01000616             489 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 67615tic ultra-conserved element locus
            uce-2450, sequence.
ACCESSION   KCPA01000616
VERSION     KCPA01000616.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 489)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 489)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="67615tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>489
                     /note="ultra-conserved element locus uce-2450"
BASE COUNT          164 a           93 c           90 g          142 t
ORIGIN      
        1 aagaccatca acaagtttct gaagatacat tctataagga aacagttcaa tgttttcaca
       61 caggtcaaaa tggaaaagat tgaaatctgc ttgtcacaaa cagaagtgca gttgatcaga
      121 aaaagaacgt atctgttatc caaacgataa agatactgca acaatgcaaa taaaataatg
      181 aatatgtaat atatacctac tgctgtagtt tctatgtatt taattaccat tgtatttgag
      241 cgagtgctgt tgtctgcatc attctatcca acaaaggagg gatgtcccat tgaacagatt
      301 ggttaatgct ctggggcaac agatgtctac tggaactgca ggagaccagc aactggtggc
      361 ctgcccatct tctgaaaact ttcaatagac tcatgcatat gttcacacaa tagggcatgt
      421 ggtagaaatg caaacctctt tttaaccctt ttatatgcac tctttccctc tcaactgata
      481 tatgaaggt
//
LOCUS       KCPA01000617             559 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 67723tic ultra-conserved element locus
            uce-4335, sequence.
ACCESSION   KCPA01000617
VERSION     KCPA01000617.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 559)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 559)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="67723tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>559
                     /note="ultra-conserved element locus uce-4335"
BASE COUNT          149 a          127 c          123 g          160 t
ORIGIN      
        1 cccccacttc tataccacca gcccaaacat ggaacatatt ttagcagaag tgccccagct
       61 ctatcatatg tgctatgcag agtcatcatg gccatggtgc atagctgaga gccggaaagc
      121 aaacagctgc tgtagcctga tttgagttaa aatagtgtca gtgtttagtc tggcgcagtg
      181 cttcaggaga gattggcagc tgggtcaaac aaagtcattc cattggctcc cttcccagta
      241 agcttctgct agtatttagg tactagtgca gcctaggccc cttttctcag ggatagccta
      301 acatctgacc gcaccttttt aaaaatgcct tttcactctt caagataaat cctctattat
      361 acaatctgcc actaattgtg tgttaagact gtttttttct cgagagctga ggcatcctgc
      421 tctcaacgtg gtctagaaag cgggctgtta cagtgttgga ttaataaaag gggcctttat
      481 ggtttgtgaa agaatatctc tgtgcttaga caggaaactt tttgatccac agaaaagcca
      541 gacgacatct aggtaaggc
//
LOCUS       KCPA01000618             487 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 67831tic ultra-conserved element locus
            uce-1201, sequence.
ACCESSION   KCPA01000618
VERSION     KCPA01000618.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 487)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 487)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="67831tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>487
                     /note="ultra-conserved element locus uce-1201"
BASE COUNT          158 a           73 c           84 g          172 t
ORIGIN      
        1 aatatagcag gatatgattc agtttttaag agtaaagttt gaaccagaaa tacgtgaact
       61 gattgcgaat atttattaac taaataattt aataataaag aaaatgccta cttgattaat
      121 tgttacagag taaaaattac aataaaactg tcttgatcag tgctttgcag aagcaccatt
      181 actgtctgtg cagttgttta acaaggattt aattggaaag ataagtgaat gcacatttaa
      241 aagtattgtt aatttgcttt ataatcaccc catccttcac agtattgaca gcaccaggca
      301 caaacccctt tctcttttac aagtattatt ttccatatgt gcacaataaa ttctggagca
      361 gtaattggaa tttttatgga tttcaacata cctagtgttt tgattttata ggtgccatat
      421 cccttctcta aaggttgttc ataggtggca attacacatc gacttgttgt ggtgtggtag
      481 tttttgg
//
LOCUS       KCPA01000619             415 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 67938tic ultra-conserved element locus
            uce-1986, sequence.
ACCESSION   KCPA01000619
VERSION     KCPA01000619.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 415)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 415)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..415
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="67938tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>415
                     /note="ultra-conserved element locus uce-1986"
BASE COUNT          129 a           69 c           76 g          141 t
ORIGIN      
        1 gagtctttca ctttttaatt cagcgattct ataaacatct tctgccaatt taaaaaatat
       61 ggtaatacaa agcaattttg tttgctctaa ttctggtgcc agattaggta attagaatgg
      121 tgtctaatat ccttccagta aatgtttctc cataaatgca aaatggaatc gagggtctgt
      181 gggttacatt agcttaatga aaacaagact ttaatgcata ttgttacagc agtgtttgaa
      241 tgcacttatt aaggcccgtg ttcccacaac catatggttt ttgtcattaa tgtctccttt
      301 gaggaaaagc actaaaatta ggttgcatct ttgattccaa tgatcccaac taaatgatat
      361 ggtaaccata tggtgtgcag tactgataga agaatctgga aatgtccttg taagc
//
LOCUS       KCPA01000620             367 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 68038tic ultra-conserved element locus
            uce-6335, sequence.
ACCESSION   KCPA01000620
VERSION     KCPA01000620.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 367)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 367)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="68038tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>367
                     /note="ultra-conserved element locus uce-6335"
BASE COUNT          128 a           57 c           69 g          113 t
ORIGIN      
        1 gaaggaacat tttgctaaat gaataaacta agagaaataa tttcagaaga agtgcaagcc
       61 agaaaacaaa taaaccttaa tactaccaca aataaatgag actaaggcaa ttgtgggact
      121 gctcaaagcc tttttgcctt gctgaatgaa agcaatccct aagactgaat gggtaatgag
      181 atcctggctc ctgagatttt agctttctta atcatgttca taattaattc aagaacattg
      241 ataatttcat tacattcttt ttgtcttatc aataaatgat gtgcctgcac ttttggtcct
      301 gtgtacaggg agaaaggaga tgctttgggt aatattgcac caggaattgt atatgtatat
      361 atacatg
//
LOCUS       KCPA01000621             584 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 68147tic ultra-conserved element locus
            uce-232, sequence.
ACCESSION   KCPA01000621
VERSION     KCPA01000621.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 584)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 584)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..584
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="68147tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>584
                     /note="ultra-conserved element locus uce-232"
BASE COUNT          204 a           80 c          101 g          199 t
ORIGIN      
        1 tttatttaaa atgaaacatt aaaacttcaa agacctattc tagatatata aagtttcaaa
       61 ttaaaatgca ctatgtgttt cacagcaaaa aatgctatga agatgaaatg gatgctttat
      121 ataaaatatt tacatagata gaacataaaa aatgtaccat agttggtaac ctttatgact
      181 tggggaacca tgtatttaca tatctttatc gtcgcatgtg cgtatgtgtg tgttgtgtat
      241 atatttttaa cagttgacag ctgttttaga gcatacagag atgccaagct gaatgagggt
      301 cttgattact tcaagattag ctatctaaag tttctattca ttttaagtgt tgttagtgcg
      361 aagagtcatt agtcacttcc ttgtctcata gaacatcagc atacatttac attgttaatg
      421 aacatttggg gtaaatgaat taatggcact tttaaacatc aattcaatcc taataacttt
      481 gtatgtcata gaaatgttaa ggttgggata aaaatgagaa accttttcag tcaaggtaac
      541 taatcgcttc tgggcacaat aaagggcaaa attaacttac agtg
//
LOCUS       KCPA01000622             587 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 68255tic ultra-conserved element locus
            uce-4159, sequence.
ACCESSION   KCPA01000622
VERSION     KCPA01000622.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 587)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 587)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..587
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="68255tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>587
                     /note="ultra-conserved element locus uce-4159"
BASE COUNT          209 a          116 c          108 g          154 t
ORIGIN      
        1 gaagatcaaa cgaaagaggg gactcgggtt aaatgctgga agacaagctt aaataaagtt
       61 ctaagaaaaa agcaagacac gctgtaattc caagaaccta ttacttcaga caatttactt
      121 caaaaaataa aatcagaatg gtaaatgatt acccaaaagc aatcatgtca tcatcactga
      181 aagatggaat aaaataattt tttgtgaagt ggctgaatga gagcaactta aaagccacgg
      241 agcctgtcag aagcacatta tttcttttta caccccgttt cccaattcat ctcagtgctg
      301 ctgactaacc ttggctccca gcaggtggag catttaaaat aaatagcatt tcctacaaaa
      361 cgcgctccaa ctgccccatg acagacgctt ccaattcctg gccagccact ggatcagctt
      421 cagcggtatc taacaaggtg taaatacaat aacaagcatg taattaagtg agcatgatga
      481 agttaatgga gataattcat tccattttgg gcttatgaat attctattag atgttatcag
      541 gcagctggaa tagctgttaa tttaatcatc attcagacca gcaaaat
//
LOCUS       KCPA01000623             501 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 68361tic ultra-conserved element locus
            uce-2472, sequence.
ACCESSION   KCPA01000623
VERSION     KCPA01000623.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 501)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 501)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="68361tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>501
                     /note="ultra-conserved element locus uce-2472"
BASE COUNT          148 a           79 c          106 g          168 t
ORIGIN      
        1 tttctgggaa cttagtgcac taaatattgt gtgtccaatt tgaggacttc acaacaactg
       61 tgggtctttc tctctcgtct gttcattggg ttttcttctg catataaatg cattctctgg
      121 tcattttgaa ggatgtgtct gctacactgt ttcattaaac tgccacgtta tcaggtaatt
      181 gtttaaacat aatgccatag cactatcaaa aggaaaggtg aactaatggc atttgcaaat
      241 gtcagggatt atcttaacac ttttattata gtttataaaa agtaggttca gggcattcca
      301 tggcaattat ttccacagaa attggttatt caaataaatt gctaattatc tggatatgac
      361 agtattgaaa accctgctaa tgagttattt gataagtgta gcttatggtg gccacctaca
      421 ggtggcagaa agaaagagcg agtggaataa ttgcagtcag aaggaatgtg atgcaaatgg
      481 tttgtgtgta atccctggac t
//
LOCUS       KCPA01000624             716 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 68475tic ultra-conserved element locus
            uce-2527, sequence.
ACCESSION   KCPA01000624
VERSION     KCPA01000624.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 716)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 716)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="68475tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>716
                     /note="ultra-conserved element locus uce-2527"
BASE COUNT          190 a          189 c          144 g          193 t
ORIGIN      
        1 caagctcttc caaatgctgc tgtaaacagc aggctcttgg agggggctgg aaggtggcat
       61 tggaaaggtt catgaaccac ttcctggcgc tctcctctcc aagcacagcc acattgccat
      121 gtggaggaaa cctttggcag ctgtcttgtg ctgggagaca gggcttgttg agcttggctg
      181 agtaatccca gccactcccg tcactgcagc tgcatgcatc cttgttctcc caacctaagg
      241 atcgctgcct cgctgaatca ccccattaaa ttgctaatat cttattgttc tttaagattt
      301 cgaaacttgc tgcgaaacgt ttacagataa tttttttttg cctgcagtca ctgtgcctaa
      361 tgcccagtca ttgagtgcca tatgtgttta tatgcactgc aattttccac ttgattacat
      421 tttaccacaa acactttcat ccactccgca aagacagcag caacacatcc ataatgttca
      481 gagcagccca gacagacaga gctcagacac aaatgtctcc gggcactgca aaatgtgaga
      541 ttcttaaaac caagtgaccc agtctccaat tctgaagtct ccaagggcag aaatacctca
      601 gccacctaac agaatgtgca aagttaactt catgctccag ctttcccatt aatgctgctt
      661 gtaagtctgg aacagctaca catttggaca tgaaccgagg atatctcaga ttttcc
//
LOCUS       KCPA01000625             302 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 68575tic ultra-conserved element locus
            uce-6922, sequence.
ACCESSION   KCPA01000625
VERSION     KCPA01000625.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 302)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 302)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="68575tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>302
                     /note="ultra-conserved element locus uce-6922"
BASE COUNT           83 a           71 c           66 g           82 t
ORIGIN      
        1 ataagatgtt gctgttctga tagtaaggca gcagtgcccg ggttcataac gggcttaatc
       61 actgtgtcgc aggttgtgat gcttcacaca gacctgtact gtgcagctgc cctctctctt
      121 tgcaggtttg tgtactagac ctccggaaat agcgctctta gttggaagcc atggaccgac
      181 tatgaatgtg tacatagcca aaatgactgt ccctgaccca tgtactgcta tagtcccaat
      241 cgaaccatgg ccagtccact acagccaaat gtaaaagaaa tatatacata tactgtatat
      301 aa
//
LOCUS       KCPA01000626             526 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 68682tic ultra-conserved element locus
            uce-5734, sequence.
ACCESSION   KCPA01000626
VERSION     KCPA01000626.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 526)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 526)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..526
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="68682tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>526
                     /note="ultra-conserved element locus uce-5734"
BASE COUNT          161 a          116 c           87 g          162 t
ORIGIN      
        1 taacatttct gcagtttccc tgagtattta gctccaaccc ctcttgacat ttcttcttgc
       61 ctgtcactgt ccctccagcc agtgtgcaca aaaattggaa ttcaagtcct gtctgaaaag
      121 taaaagggac aaattagttt cttgtcactg cgctgcaata aatacattgt catttttata
      181 ccccagtgaa tcatattctc catttccccc gtaactatta tacagtctgc tggcagtaca
      241 tcattttttg gtaattttat tttcaccaat tgttttatga aatttttgag ttttatggac
      301 actaaaacaa atctagcctg tgcgtattat agccctttaa atcactggca ggaaatctca
      361 aggttcctcc agactgtgag agaaggaagc tttaggaaag aaagattgct cctagcttat
      421 aaactgagca aaaacccaga gataagtttg taaaagggac atacatcatc actggcaaaa
      481 agcaggacgt aaaacaacat ctctccgctc agctccctta agaata
//
LOCUS       KCPA01000627             654 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 68793tic ultra-conserved element locus
            uce-4248, sequence.
ACCESSION   KCPA01000627
VERSION     KCPA01000627.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 654)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 654)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..654
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="68793tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>654
                     /note="ultra-conserved element locus uce-4248"
BASE COUNT          212 a          113 c          116 g          213 t
ORIGIN      
        1 gtttcggtgg aagagtacac aaatacctac ctacagtaag ctgagcagaa gttactcaac
       61 catatgtaag cctgtaaaat ttagccacag tgtaaatgtg ttattcctgg gacaaggatc
      121 tggcagggta tggaaaagct ttagcagttg tattagtaaa cctgacagac ttgagaaagg
      181 agtattgtat ccttagaacc atggttgcca gaatttaatg tcaacaatta aaatttattt
      241 tgatccttac ctagtgttta ttactgtttg tatacacaac agaccttact aatacagaga
      301 tgcactatta gatggaatta ccatctgttc agagcgaaat gctggcatct gtcttcgagc
      361 ctaaaactaa aatgatatta tttcaaacaa aacaaaatta actgctcttt acttaccaac
      421 ttcatttttg tgtacatgtg tgtgcataaa cacatgggaa aggcttattt gtaatgacct
      481 gtgtagaaac atctatattt agatatatga cttcaacata agctgtatgg accatctgtc
      541 tttattggtc ttttctgtgc cctctgctac acaatggcat gcagcaatca tgggctttta
      601 aatactgttt tagccctata atatattaaa tatgtattat atagcaagac atta
//
LOCUS       KCPA01000628             715 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 68905tic ultra-conserved element locus
            uce-4592, sequence.
ACCESSION   KCPA01000628
VERSION     KCPA01000628.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 715)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 715)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..715
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="68905tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>715
                     /note="ultra-conserved element locus uce-4592"
BASE COUNT          236 a          117 c          175 g          187 t
ORIGIN      
        1 tactttgtgc ctttggatgg aagagatttg ggtggaaagg agaccaggcg agagaggaaa
       61 gaacaaggag ttctgggcaa cgtataaata ttgagtatga ggttgtacaa gctgcacaga
      121 ctccattaag gaaaggccac agatagacat gagaatggtt acagagcttg tgcattatct
      181 cagctctact aaaatgaaaa tatacagtac aaacaaaaga tctacagctt tgtgaagaga
      241 ttgggagaga gaggacaact gaatgttggg ctttgcaaat gcgtgcaaca aaaaatcttt
      301 tcttccctct agccattgtt ctattgtctt tcaaaggcca ttaaattgaa cagcaggttg
      361 tgatgaaaat ttcattaagc cctagttaaa tcattatgag ggtgccatat tcatgtctct
      421 gcttactccc caaaaaatga ataggaagga gttgagcttt ctccttgaaa gcgaactaac
      481 aaaagttcag aagttagaag agaatgggaa atgggacatg aaacaaaagg aggccagaga
      541 ggtgagctgg ctaggaagaa aattagactt gcataagagc attgaaaggt ggtgagggac
      601 aaatacatca ttttgacaag cctccccttt cccttcagcc aacatggctg tttttagagt
      661 ggctaattat atatatttct gggtgcagat ggctagactg ttcttagagg tcctc
//
LOCUS       KCPA01000629             398 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 69008tic ultra-conserved element locus
            uce-5953, sequence.
ACCESSION   KCPA01000629
VERSION     KCPA01000629.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 398)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 398)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="69008tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>398
                     /note="ultra-conserved element locus uce-5953"
BASE COUNT          150 a           58 c           80 g          110 t
ORIGIN      
        1 tgatgtgaaa ttcccaatgg gttaaaaata aacagaagaa ggcaaaagaa acagagagaa
       61 acggtaatga cagttttgaa gtatccagta cctgttgtga caggaataac aaattaattg
      121 ggactataac ggattctttg taaaggtgaa gtaaacacac ttgactgtat atttttcacc
      181 atcagttaag tctcaattgg ttctaaaaat aaacagaaga cattgaacag ttttaatgga
      241 ttttgacacc taggtattat gctgtcactc cagtataaat gaatcataac tttagactgc
      301 accaaggaat tactacacat ttggagaaaa tttatggtgc agcgggcttt gaatcatgat
      361 gtgatatcaa aactaaagtc acaagaggaa agtctggc
//
LOCUS       KCPA01000630             512 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 69118tic ultra-conserved element locus
            uce-4999, sequence.
ACCESSION   KCPA01000630
VERSION     KCPA01000630.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 512)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 512)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="69118tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>512
                     /note="ultra-conserved element locus uce-4999"
BASE COUNT          153 a           94 c          135 g          130 t
ORIGIN      
        1 aaagttcagc taagtaaatg ctaccgaatt actgactaca tgaaacccag gaggaccttc
       61 cagccaggct ttttgtgtat ggtccgtgga agccgattgc agcaccgtgt ttggccatgt
      121 gatggcggaa gaatgtttta tgagttcttc tttttcattc taatgtaaag atgtgtgtct
      181 agttctgcat tccaggaagc agacatagta agctctaagg acagtggtca tggagacagt
      241 gagcaaggag acagtgatca tgatgccact aatcgaggtc aatcctctgg taagtctgat
      301 aagagaatgg aaatattgga tctttaagta gggagactag aaggagcagt tacaaggtga
      361 gcatgggagg ctgggcagtc tgcttgctgc tacggcctgg acaaggaggc aattgtcaca
      421 gggcaatact gcatcaatca ctgaagccct gcccattaaa acaaagttat tggtacaatg
      481 gcagattcag agaatttcaa agcattaagc aa
//
LOCUS       KCPA01000631             685 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 69226tic ultra-conserved element locus
            uce-5570, sequence.
ACCESSION   KCPA01000631
VERSION     KCPA01000631.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 685)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 685)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="69226tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>685
                     /note="ultra-conserved element locus uce-5570"
BASE COUNT          195 a          172 c          158 g          160 t
ORIGIN      
        1 gcctgtccag ctcgtggcca acatctcctg ccggagcact agaaagggat tttacctcag
       61 atgctgccga atgtacagcc cagagccagc ccagctttcc tgttgcaaaa cctggcaacc
      121 aaaccccagg aaacactgca ccccctccaa agtgtgcagt caagaggctt ctgcacatct
      181 gtgttgtaac acacggggag cgaggggaaa tgcagacacc aaatcctcca tctgcagccc
      241 aaagtaacaa tgttggaggg caggaaaggg agagggaatg tggtgcacac aatacaaaaa
      301 gtaggttttg tgccaggctc atcagtgtgg cagggtaata aggtcaatgt gaaaacaact
      361 ggaaggcaca ttccccagta aacatgtgct gagtgaaaac ggcccgacct tatgttgtag
      421 aatccaaacc cattgagtca attgccagaa aacatgacat gacctttcag attcagtgag
      481 catcagttcc aagagcaggc tgccgtgctc ttttccattt cactgctgcc cccggagggc
      541 ctcaagtcac ctgaaataat agcttgggct caaaatctgc actcctttaa tgaaatacac
      601 atggcatcaa gtctgaccct ggtggcagat tttttatatg cttagctcaa tttctttaaa
      661 ctaaacaatt gtgctttgtt ttgct
//
LOCUS       KCPA01000632             825 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 69338tic ultra-conserved element locus
            uce-3215, sequence.
ACCESSION   KCPA01000632
VERSION     KCPA01000632.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 825)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 825)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..825
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="69338tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>825
                     /note="ultra-conserved element locus uce-3215"
BASE COUNT          245 a          113 c          169 g          298 t
ORIGIN      
        1 tgtcatagat tatttaattt ttaatcattt attgtaagtg aaaaaggtta tttaataata
       61 ttatcctgac agcaaaaaga acaacagttt tccagtatgc cctgtggtat atgaaggggt
      121 caatggaagc atctagagag cttcaagtac acaatctaaa ttaagattct aaacaggcat
      181 tacagatgct ggtaactttg gcaattatca ttttgtttgg tgaacagtag taaaacagtg
      241 tgcggtaaaa gtgtttagag agagaggata aataaattga acagttttgc aatgcaaagt
      301 ggtttgtggt gtttttgagg atttcttggc tcttgcttaa ctgctattgt gaagcctgga
      361 gcagattttc ccattgctaa tgccctagaa gtattaattc actttgatat gctaattaga
      421 gggcattatg caagaaatga gattaagtgg cagcatgaag ccatttgcct gtcagtaaat
      481 tgagagcttt agcatcagga ggagctttgt tttttctgag tttctcttgg ttttgcatat
      541 aaataaaatt gattgaaagg tctagagaag cttctagaac attggtggtt ctttttctcc
      601 ttctatgatt atttaaactt catgttaaag cctttctctg aatattaatt gatctaatgg
      661 gagatactga acatgaagaa tttcattgta ttctcagtta ctgtatctta acaaaaggaa
      721 agtattagaa ttctttgtgt catctgattt ttgtgggatt attttagata tatcttacag
      781 ctttgtattc taatgtctct gcctgctcac ggctcctgtg ctgag
//
LOCUS       KCPA01000633             591 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 69444tic ultra-conserved element locus
            uce-6352, sequence.
ACCESSION   KCPA01000633
VERSION     KCPA01000633.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 591)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 591)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="69444tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>591
                     /note="ultra-conserved element locus uce-6352"
BASE COUNT          199 a           98 c           98 g          196 t
ORIGIN      
        1 tttaccttag gagtagcaaa gttgcttatt tctgtactgt agagttgaac agaactatgg
       61 actgatgttt tcacaaggca tcagtcacac ttccacaaca ttttctgata taaatataaa
      121 agcttcattt aaaaggataa ataaagcaac actattatct aaacagggta aaatttaaca
      181 tccttgtggt ttgtggaaat ttttgatgtg cctgctggct tttcaataaa aatcaattat
      241 gccttaaatg cgagcagtag tcaacatact acagactata aattcaattt catactcaga
      301 aatatggatt agctgaactt gatgcccttc cattgatttc agaaagcaaa agctgataag
      361 gtaaataata gtaagaagct ctctgacact ccacatcaag ttccggattt ccatattatt
      421 tttgtaagaa ctttccagcc accacaatat cctccttgtg aaatatgtat gatgaataga
      481 tattatatgg attgctgatt catctctatt tacagaatgg atatttggct tttataatgc
      541 aaggtgggaa ctggatagga aatgaatata cttatttcct ttagcactat g
//
LOCUS       KCPA01000634             632 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 69555tic ultra-conserved element locus
            uce-7104, sequence.
ACCESSION   KCPA01000634
VERSION     KCPA01000634.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 632)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 632)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..632
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="69555tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>632
                     /note="ultra-conserved element locus uce-7104"
BASE COUNT          198 a          116 c          107 g          211 t
ORIGIN      
        1 tatacagctg catgttcatg gctttattcc cttatcaaaa cctgtgaaat gattttgatg
       61 atgcggaaat caataaaata tttacttaga ggttttgcac ctgcatttac aaacttcaga
      121 accaaaacac acgaaccacg attatatttt ctgacgttag tcttttctct atgacactat
      181 tggtatatgc aaataattac tttttttctt tttgatacaa tttcattatt tgcattgcta
      241 ctagtggttc accaataaag gcgaacatca cattaggatt catgacagtt ttcacattgt
      301 attatcaata tgtggaaata attgtctgct ccaggattaa attacattat tgtgtatctt
      361 tttcatgcct aataaataat gatggatggc ttttattttc atcaccacct gcaaccattt
      421 agtcacccct tgattgttga agataaaata ataaaaagca agtgttatgt tgcaagcaaa
      481 agaatgcagt caaaacagtt gcatgcctcg tgtctctgcc tacctttttc cagtccctaa
      541 agagcaatag ttggtgttct gggaaggctg gcaacctgca aactggcaaa cagttctcat
      601 aaattgggca agggggaaaa atgtggaaaa cc
//
LOCUS       KCPA01000635             422 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 69662tic ultra-conserved element locus
            uce-3417, sequence.
ACCESSION   KCPA01000635
VERSION     KCPA01000635.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 422)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 422)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="69662tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>422
                     /note="ultra-conserved element locus uce-3417"
BASE COUNT          133 a           62 c           73 g          154 t
ORIGIN      
        1 tttttttgct taactgcttt tattataaaa cattcttatc aaaaatattg cactatatta
       61 gtacaaaaat tacgtaatgg aatcatgtga gacatttctg cccagatact gcattttggt
      121 gggccttgta gttgaagagg aaggtccaac ttgaacgagt ttattatggc ttagtgattt
      181 gctgattgat ttcatttgct gtcagttaag gctcttttaa tgtcaagctt tctttgcata
      241 atgctttgtt tttcagattg atgctgctta tataaactga ccctgatttg cccttctgca
      301 tgacaatata agtgacagca gttagataaa aatataacaa tgaatatgca acttaaggat
      361 taagaaaaaa cctttcagaa tataaaacta ggcattctct tatttcattg aagaagtaga
      421 tg
//
LOCUS       KCPA01000636             563 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 69773tic ultra-conserved element locus
            uce-778, sequence.
ACCESSION   KCPA01000636
VERSION     KCPA01000636.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 563)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 563)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="69773tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>563
                     /note="ultra-conserved element locus uce-778"
BASE COUNT          180 a          116 c           99 g          168 t
ORIGIN      
        1 cagctagcac ttgctattgc tgctggtttc catggcaaaa ggccattcca cacactttta
       61 atttctggct atcttttgat gagccaccca gtactgactc agcggtgctg gaccttcact
      121 gggggcccag aactctgcag ctgctctagc tctgcatttg cctagagcaa tgtgccagct
      181 gtctctgact gtattacacc acagtaatgt gaacaactgg aagcaataat gtgtctcccc
      241 atttgcctaa caataccaac atgaacaata attcagaaga ctgaagattt gtgctgtaat
      301 ttaataaacc ccatgcacat ttctacaatt gagtatcaca tctgtgcaat ggatcctaga
      361 agtgtaatat tcttttataa gggaccatta accaatctta agtttatagg tttccttaaa
      421 tctttttcat cagctgttaa actacagtaa agagaaaatt gcctcttatg agacaagaga
      481 tagtaaaata caaagactgt gattaaacgt caatcaatta aggattataa tataataaaa
      541 atgctgactg atgattaaaa tga
//
LOCUS       KCPA01000637             640 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 69879tic ultra-conserved element locus
            uce-5068, sequence.
ACCESSION   KCPA01000637
VERSION     KCPA01000637.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 640)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 640)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..640
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="69879tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>640
                     /note="ultra-conserved element locus uce-5068"
BASE COUNT          164 a          128 c          144 g          204 t
ORIGIN      
        1 ttctctttgg taattgcaga gggcaatatg cttggagcat gagagtagag cctgtttcag
       61 cagtcttata gagccctctt agtttaagca caattgcttt tctttcagta ctgctaagag
      121 gtaagtgcca ggatttagca tgtataacat tgtctgaggc atttgttcag ctgtctgttg
      181 aatcccctga aactaatgtt cagtctctat taaagtctca gtccctggaa agcagagccc
      241 attctctcct ataattaatc ttgcaggtac tgccttgaca ttattggctc accagcagag
      301 cagaactgcc ccagccatca ataataattc agcgcattag ggcaagacct atgtacacag
      361 cccacagatg tagctgagtt gtgtgcaggc ttctgcactc cttgctgaca gggaaaagaa
      421 ggtcaaaagt gttttggtcg ctggataatt ttgcaataca aaggtcgtgg tgttactcat
      481 gctttggctt tatgtcttca aatgttggca ctgtttggca caatgcttgt gattgtctgt
      541 ttactgaatc tttatactaa agctgttaca aattggcttt cacagatggt gggagcttct
      601 cagatcagga gaggcaggga atttattact caatatttct
//
LOCUS       KCPA01000638             634 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 69990tic ultra-conserved element locus
            uce-7965, sequence.
ACCESSION   KCPA01000638
VERSION     KCPA01000638.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 634)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 634)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="69990tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>634
                     /note="ultra-conserved element locus uce-7965"
BASE COUNT          180 a          169 c          109 g          176 t
ORIGIN      
        1 ctatcaacat gcatggtttg acatttgcat tacaattaac atggcttgtc ttttactagg
       61 gatgtaccac acgagtggac cttggctttc ccatcagttc tttgatggct ttaaaccttg
      121 gtttatttta atattggtac agacattaaa atgcacataa ctgagccact cgtttatgca
      181 tataacatcc agagactttg gactccagct gcctgcaccc ctaaccatgt gctacatttt
      241 tcaccaagtt tctctgccct gctgctgccc tgggtcctct gacagccctt tccttttccc
      301 agatccgcgt cgtgaaggca ttccgtagct ctctctatga aggtttagaa aaaccagaat
      361 ctagaacctc tattcacaac tttatgactc atcctgaatt taggatagaa gattcccagc
      421 cccacatccc actcattgat gacacagacc tagaagaaga ccctgctctc aagaaaaact
      481 cgagtccacc gtcctcgctg aacaagaaca acagtgctat cgacagtgga atcaatctta
      541 caactgatac aagtaaatca gctacctctt ctagtccagg aagcccaata catagcctgg
      601 agacatcact ttagctgaaa aggtcactgc aaaa
//
LOCUS       KCPA01000639             872 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 70099tic ultra-conserved element locus
            uce-1311, sequence.
ACCESSION   KCPA01000639
VERSION     KCPA01000639.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 872)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 872)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..872
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="70099tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>872
                     /note="ultra-conserved element locus uce-1311"
BASE COUNT          266 a          189 c          161 g          256 t
ORIGIN      
        1 gaacgaacct tacagtcata tcacttcctc cagctggaaa gagatcaata caaacttttg
       61 tcatactgtc taaatgtaat tgatgtacag taaacaaaat tgaatttaac caaaaatgag
      121 aaaaaacaaa ttcacccaca aactctggaa atttgtttgg agctcatatt caacctttta
      181 tgttctcctg cttagcagcc ctctcgtcct accccaacca attaagacga acgctatatt
      241 tctcccctcc tttttcggtc aaagaatctt ggcacaacca gcacaaacaa actttgctaa
      301 cagctttaaa cttggaaggc ccgcttttta aatatttgcc gctacataat tgaaacagct
      361 gttttaatga gatacctact gtcatcattt taccctggct gagctgggtg acaacaaagc
      421 agtaataacg aattcaataa taattaactc gggtcatctg ctcatctgtc atggctcatc
      481 agctttaggg agaaaaatcc cagtgaactt ctctcttttg tgagctttcc aaaactctgc
      541 aataaaatgc ttagagagga ctctaggtag cccttcaaaa gttctaagca aactggtaag
      601 taggttaatt aaattttatg catgtttaaa tgctaatgat tacattccta acattacagt
      661 gtaatctgtt atggaatgat gtcatgcaag cagtggtttt tagtgcctaa cacatttcta
      721 gcctgatgtg gagcagctct ggatcatttg tcggagggca ggaagttgac agtggtgctt
      781 cagagccagg ctctccctct ctgttgaatg tcaagcaggg gagctgcaga aagccactga
      841 ttttatgcct actgccacat cacagagggt ga
//
LOCUS       KCPA01000640             705 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 70211tic ultra-conserved element locus
            uce-3334, sequence.
ACCESSION   KCPA01000640
VERSION     KCPA01000640.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 705)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 705)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="70211tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>705
                     /note="ultra-conserved element locus uce-3334"
BASE COUNT          181 a          165 c          139 g          220 t
ORIGIN      
        1 actgcattct tgaactgcga tgtatgcatt tgcgggcagt ggggcagcca gtgggagggt
       61 attgattgga gtataatgtc atgtgtagca gcgagagtca gatgaaaagt gttttctgct
      121 taatgggttg gtattaagta ggtgggaatg gcttctaatt aaccaacaat tgctgtgttt
      181 ctcagtttcc ctcccttccc tcctcctgtc ggtcaccagc tgccaatctc tccctccttt
      241 tccttctgcg gagttcattg ctcactgcag tgaaagcctt tgtttaaaaa agagggctcc
      301 cagggtctca tctgccaggg tacagcttgc tgcctgcgat gagtagcaac tgtcagttta
      361 ttttatctca accttttcat cattctgctg aaactggtcg agtgaaacca cctgagagac
      421 ctgaggattc agtacctaca agtcattagc caggactgct cagtctctcc ccacacagca
      481 agtcaactga acactgctta aaatatagtc cactttaacc ccatattttc ctacgacgta
      541 ttaggaccat cttccacatt gcatgatcat gtcttttaga aatacaaaat ataacatact
      601 aaaagttaga atagcctcag tcagaacctc tttcttattt aggttatttt ctccagcatg
      661 aatatcatac ctagcaacta aattatttga acctctgatt gtctt
//
LOCUS       KCPA01000641             820 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 70320tic ultra-conserved element locus
            uce-2782, sequence.
ACCESSION   KCPA01000641
VERSION     KCPA01000641.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 820)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 820)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..820
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="70320tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>820
                     /note="ultra-conserved element locus uce-2782"
BASE COUNT          241 a          139 c          169 g          271 t
ORIGIN      
        1 tcatggtcaa aggtggatgt tatcaaggca agacaatgtt agccaggaat taatgtaata
       61 tacaagtgga gcttctttgt ttcctacact gtctgttgac attccctagg taccaaaaga
      121 aaattgcagg gatagacttc tgctgttatt gtctcagtga taggtcgaat ctccaaacaa
      181 actgtatgag gaaggttatg ttttggaata acatcctgtg tttttgtgct taaccacttt
      241 tcattgatgg tctgaagttg cattgtatta gcacgaagta ttttactgag ttaattgata
      301 ttccaggttt gtccggggga aaatctacag ctccccacaa catgcttgac aagttattat
      361 atttacttta gtcaaagccc gagtgtgcag tatccctctt ggaggtggtc tattattgga
      421 gtcccatatg ctttttgttt gggaagaaag cagtcactgt gtcatactgt tacacagggt
      481 attctttttc aaggatgttg ttcccttggg gaccatatca tgccagagtt cctaagtcta
      541 ataagacctt tgtagctctt attgtgtcaa agttctggga gggaggcaag agttaaacag
      601 aaaatataat tcaagcaacc atactagacc acatgttgaa aaatatcact gttcaagcag
      661 aaaggcaaag gcttcaaaaa gattcctgat gtgtttttat gtttcttccc aattaatcaa
      721 aaagggtgat ctttgtagaa tgtctagttc tattaaagta attaaaaata tatcagcagt
      781 tccgtgtcct tgtatatcac aattcttcga aagaaatgtt
//
LOCUS       KCPA01000642             375 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 70422tic ultra-conserved element locus
            uce-7071, sequence.
ACCESSION   KCPA01000642
VERSION     KCPA01000642.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 375)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 375)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="70422tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>375
                     /note="ultra-conserved element locus uce-7071"
BASE COUNT          120 a           95 c           61 g           99 t
ORIGIN      
        1 gccttgaaat ggttcagcct tccaactcct aggaaactaa tttcctaata atctatttgt
       61 ttaaaattag catctacaaa gataactctg tgagcagcct ggactttgat tttgggagta
      121 caccccagaa acctgtaaat gcaggcactg ctttcctttg catccagaat tcagcagagc
      181 tgtcagataa cacatgagag atggttaata ataaattaaa aacattgcag ccacagggaa
      241 actgcaactc tcccctaaac tccccctctc ttttgctttt ttctacccca tgggcttaat
      301 cagcatcaaa gagtaacaaa tccaataaaa tgcttccctg agccaggaac cagcctgaac
      361 tggatacaca cacac
//
LOCUS       KCPA01000643             540 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 70532tic ultra-conserved element locus
            uce-18, sequence.
ACCESSION   KCPA01000643
VERSION     KCPA01000643.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 540)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 540)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="70532tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>540
                     /note="ultra-conserved element locus uce-18"
BASE COUNT          126 a          105 c          116 g          193 t
ORIGIN      
        1 gcaccaaagt ggttactttt aactgttctg cttcgtatgg atatgtgggc ctctgctggg
       61 cttgagtgaa gttagttggt ggctcagctt caggcaattg aaagtcattt tgatttctgc
      121 tctgtggtgt aattgctcac atgttatttg atgattaaga ttctggagtg aattgtgttc
      181 ttttgggttc ttgcactgtt tctccatcag ggacttggtt tcagtggtgt gcagctgctg
      241 gagttgattt acagtgctgc ggctgtggct agtcataaat aaatcctctt atatagttgt
      301 tatgaacacc tgttagatca tctgtcagca aagcactgtt cacatttatc atggtgcggt
      361 agttatttta cctcaatcca tttccgactg actcggcctc catcactgga ttactattac
      421 cacaccataa tcgctcgttt ccactccatg ttacaacttg cagataaaag atttcactac
      481 ttggccaaat ttcataaata aaggagcagt tcagtgcagt aaaagtttat ttttgtcatc
//
LOCUS       KCPA01000644             471 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 70633tic ultra-conserved element locus
            uce-645, sequence.
ACCESSION   KCPA01000644
VERSION     KCPA01000644.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 471)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 471)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="70633tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>471
                     /note="ultra-conserved element locus uce-645"
BASE COUNT          155 a           97 c           81 g          138 t
ORIGIN      
        1 atggcatccc tgagcatcaa tcacaccagt ccagctatct caattaaccc ttagttaagc
       61 tgggacctcg tggagaaact gaaaagaatt tgagggaata agagatgcta tctgccacaa
      121 ggattaccat tctacatgtg gatcaaagac aattccacat tttaccctag tgattagctg
      181 taattaaata aagtaagtct gtttaaactt cattagcagc aagacatttg ctacagcaga
      241 gtgggcacaa atcatccatt cttaattaaa agataatcca caggatgacc ataatcttgt
      301 tctaaaagta cactctttcc ccctgaaaga tttcttcatc aaatacggat aaataacagt
      361 ttctctctgt ttaagctatg aaggaatgga tgctccttcc catttgcttg aatgagtgct
      421 gaatgttcct gataacatca ctttggcatg ccattatcta aaatggtaga a
//
LOCUS       KCPA01000645             711 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 70744tic ultra-conserved element locus
            uce-6500, sequence.
ACCESSION   KCPA01000645
VERSION     KCPA01000645.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 711)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 711)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..711
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="70744tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>711
                     /note="ultra-conserved element locus uce-6500"
BASE COUNT          198 a          155 c          139 g          219 t
ORIGIN      
        1 tgttaaatca atgatcataa attagggctc tgtttttaca gcaccttatg ggaaatggtt
       61 aaattaatca gctgcagcaa tgagcacctc ccacaagatc atgtcagaag ttctcacccc
      121 atacaccacc aaaaagggga aaaaggactg aattatttgt ttttacctag cacacaaaat
      181 ggaatccctc cgtctatccc tgctaattcg tgtttcaatt gtacccagct gtttaaattg
      241 cactgtgcag agattgcctt gatccccagg tgctggtact ccatctgtgc tgctctgaga
      301 gactatttac agccgaggtt aggccagtga ttgctgggat ggaaaactca tttctcagcc
      361 tggcttttat ttacactctt attaaagatc ctttcactca tgttggaatg gcagctagtg
      421 gctgcagtaa gctcttggcc ttgagccaag cagcgaaatt accgtgtcga tgaaagatag
      481 cctgcttcca ttttaacctt tcactgttcc cccctttcca tctatatttg catgaagaag
      541 gatgattatt gaaagagatg ggggacaaag ggatgagaaa atccttgtca actaagcttt
      601 tcaagggata aaccaatagt ttgtgaccaa ttttgaaaaa tctttactgc cttagtttcc
      661 tactcctttc ccttaattgc tgttagagtt tattttcaca tgaagcaaca g
//
LOCUS       KCPA01000646             582 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 70857tic ultra-conserved element locus
            uce-7751, sequence.
ACCESSION   KCPA01000646
VERSION     KCPA01000646.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 582)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 582)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="70857tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>582
                     /note="ultra-conserved element locus uce-7751"
BASE COUNT          175 a          113 c          116 g          178 t
ORIGIN      
        1 tactattgga ccaggaagga actgaataat gatacacatt ttaaaaacat agctttgtaa
       61 cttgcttttg tctgatgctt tcactactgc agaagtgggg atggggttat ttacgtaagt
      121 catttggctt gttgaaaaaa aatatgccca cactcctcta cttaatggga ttctttcctc
      181 gttgcagtgc aaacggctgg agcaggagct tcatcatctg aaagagcaga accagacttc
      241 agcaaacaac acgagacata tgactgctga aaacaatcaa gaacgtgctc tgaaggtaaa
      301 tctccatttc ttcttgcagg caaattaagg ttgtaagccc ctggtgccag ctttctgggc
      361 tgcatatatc agttgtgtac atttcggcag aagtgagcta tggtgtttgc caacaactgc
      421 ttctttaaac acagatacag cacccttctg ttatggtttt attttatttt gcgtatgaaa
      481 gcaacaaaat tacatatcct ccaaattatt gggctggtaa ttaacactaa attcttgaaa
      541 tctgtccttt caatgttgta taaggtgaag aaaactgcaa ct
//
LOCUS       KCPA01000647             670 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 70966tic ultra-conserved element locus
            uce-976, sequence.
ACCESSION   KCPA01000647
VERSION     KCPA01000647.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 670)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 670)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..670
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="70966tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>670
                     /note="ultra-conserved element locus uce-976"
BASE COUNT          192 a          111 c          111 g          256 t
ORIGIN      
        1 tgtattacag ttggcagttt tctaaagaaa aatttattaa tttctagatt gcatttgttt
       61 aatcacagaa atcttggata ttttgaacta ttaattgtgt taccatattt ttttaacaag
      121 agaacaattg agttttccag cctgagcata ttaaaagctt agtcaggtgt atgctatatc
      181 tggttccctt ccagttttaa tgtataaatt ctctttttaa tgttccaggg aaaagcaatg
      241 gtatttgctc cactccgagg gaatacttta aaccagtttt gcaatctagc tgaaaaagct
      301 ggtttctcta tccaaagaca tgaaaattat gatgaacaca tttcgaactt ccactccaag
      361 gttagttttc tgcttgtgta agataacact ttaatccgca ttgcattttg aagagatcat
      421 ggtccttttg gcaggtaacc taaatgtttg attaaagtac tccttaggtg tgctgtttct
      481 gaacagctat ttttgtatct gattattttg tgtggtagag ccatccttta tctctgcacg
      541 tctagaagag ttttaagcat ctcctgttta cccttttcat tcatagaaat ctaatttatg
      601 agagtctttt cttgttgttg ttagctgcct ataaatataa gcatttacat tttaataaaa
      661 agcctgcaac
//
LOCUS       KCPA01000648             641 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 71078tic ultra-conserved element locus
            uce-225, sequence.
ACCESSION   KCPA01000648
VERSION     KCPA01000648.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 641)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 641)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..641
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="71078tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>641
                     /note="ultra-conserved element locus uce-225"
BASE COUNT          248 a          121 c          100 g          172 t
ORIGIN      
        1 aacctgtgtt tgcagaagtg tggctcggga acgagccgga cacactaagg agctgctcca
       61 actctccaac ttttctgaat actggcatct cccaaaaaag agagctttca gatttaatta
      121 aattttacta ttttatttgt gaaaaaacta caagcagaat tcataaatag acatttctat
      181 ttaaagcagg aaaatgataa agtggcttct aataacagtc gtgcacatgc cagtaacagg
      241 aatatattaa catcttttat ttgctagaca aagagcagtg tccaatataa atttcccaaa
      301 aacatttaag acctgtgaat ttctgaccag ttcacaaaac caccattgac actttagcat
      361 gaagattaaa acaaacctaa caggactgtc agctctaaag actttacaga gcggaaaaac
      421 agaagcgtta tacaagctgt ctttctgggc aaatgaaaaa tagagctcgt ataatacatt
      481 aacataaaaa tccacaagat aagattatgt tttgacatac ttaaacaagc attctatatt
      541 tgtctccaac aaacaaagct aaggaaataa tgtaaccatc tttacacagt aaattaaggt
      601 tacaagtcat acacaagaac agaactgctt gcgcattaaa a
//
LOCUS       KCPA01000649             544 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 71186tic ultra-conserved element locus
            uce-3306, sequence.
ACCESSION   KCPA01000649
VERSION     KCPA01000649.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 544)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 544)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..544
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="71186tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>544
                     /note="ultra-conserved element locus uce-3306"
BASE COUNT          123 a          123 c          127 g          171 t
ORIGIN      
        1 gggtgcctct gcatcggtgc taatgaagtg accatctgca atctgcatca aataattata
       61 agttgcctcc cctgactgca ctccatgtgc tggcacagcc tggtgggagg cgcggggcgg
      121 gctgcaggct gctggtgggg ggctcggagg agccgatcat gtttatccct tcaccacgag
      181 gcacacaacc tgctgagcag acaggtgctg gctgtgctga tgtccatggg cgatgaagcc
      241 tggttgtcct agtagctgac atctatatct agatctatct ggatttttaa actgatacaa
      301 catgaagaat gtcactctct gttactgtat gtgtgtatct tatggatatc ctttaagcac
      361 aatgccttga ccatgtctgc cccgctttct tcagctgatg gattttgcca ttgtaatggg
      421 ctattgtttt agtttatcct tcagttcaaa tgcttctgga catgattaca gttagagtct
      481 ttccccagaa caactctatt gtttctactt atgctttaaa aactttagac ttcattttaa
      541 taaa
//
LOCUS       KCPA01000650             646 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 71295tic ultra-conserved element locus
            uce-3777, sequence.
ACCESSION   KCPA01000650
VERSION     KCPA01000650.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 646)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 646)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..646
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="71295tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>646
                     /note="ultra-conserved element locus uce-3777"
BASE COUNT          137 a          168 c          136 g          205 t
ORIGIN      
        1 aatttaggac agatcacccg tggtaagagg tcagtttatc gtacacatct ctgctcatct
       61 acagttgcca ttgcctaagt cagctggcaa aggaccttta caaattcctc tgagactaga
      121 gtcatgtatc ttttgttcct gtgccagctt tctttttctt tctaaagact tctgcctcac
      181 tttatcacac ttccagtaac atttcattcc tagacttctt gcatggttta tatttgctta
      241 tgaacatcat tatgcccatc tttcttagtt gcttctctgc tggttctgca gggtcatccc
      301 caacatcatc tcagaatgcc acgctgcctt catcgagtgc ctggccgctt agtgcctccg
      361 gctacagtag ctctttcagc agcattgcat ctgcacctag cattgcaggt acggcctttc
      421 tgcttccaca gcttctgcat tcccaggaaa gggccctagg gagtgctctc ccagtgctta
      481 caggagtgca ggcagaaatg tgttttgtgc taggcgcagc tctcctgtca gctctggtgt
      541 gcctgggatt gttggattca ttccacttgg tgtcactcaa tccagggcct cagcaggaaa
      601 agctgatgtg gaatttggaa ctcactgtta aaagtgaaat atcttc
//
LOCUS       KCPA01000651             496 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 71407tic ultra-conserved element locus
            uce-198, sequence.
ACCESSION   KCPA01000651
VERSION     KCPA01000651.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 496)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 496)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="71407tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>496
                     /note="ultra-conserved element locus uce-198"
BASE COUNT          170 a           83 c           81 g          162 t
ORIGIN      
        1 aacatttgaa atgcagccaa gtagtcaaga aaagacgact ctgtgtcttt aagctgggga
       61 aaacccaatc attccaaatg tattgcttta gtcatctggt ttcattctat taatgacctt
      121 taacatctgc aaaaatattg tgagaagcta attttgtttg tactgaggtg gtgcagaaca
      181 gtttctggct gtcagtctgg gatgtgctat aaaataaaat tgtctttctg ggagtctgac
      241 aaaaacctac tgtacagatt cagtttattt acaacagcat gaaatgaaaa gaaaacagaa
      301 ttttacaaca cgccaacatt cagaaaatga atactactta cacatttata tatattttag
      361 taataagttt tcaagatatc cactgagatt aagggatcta ttttgtattt tgtggtattc
      421 cacaaaaatt ttaaccagag caaaacattt ctctgcaaat gctcttctct agaattgtaa
      481 taacctatta ccctga
//
LOCUS       KCPA01000652             576 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 71514tic ultra-conserved element locus
            uce-7712, sequence.
ACCESSION   KCPA01000652
VERSION     KCPA01000652.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 576)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 576)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="71514tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>576
                     /note="ultra-conserved element locus uce-7712"
BASE COUNT          188 a          104 c           82 g          202 t
ORIGIN      
        1 attatttcag aaaggcagaa aagagactgt tattttattc atttatattc ctactatatt
       61 aaacatgcta gtttaaaaca caagactccc ctctttgaaa ctaacaaaat agtcaaatgc
      121 agaagaagct tttcaaaatt gtcttttaat aaaagtttaa agtcttcaaa atatatttgc
      181 ccctggagca aacttttttc atttaatatt gtgtctgtta attagtgctt caaatttgca
      241 aattctttat tggtttatat caatgtaata cccaaagctc atctcattgc cagctttgaa
      301 tgaaatatga tcctgtttat tctattaaaa cgaaggcttg aaattgttac ccaaatgcca
      361 caggaattct tgccattttc tcatcaaatt cctcatcaga ttttaaagtc acattgtttt
      421 agattttgag ccttggcatt taaatgaaat tcaatgtgcc ccactggaga aaacatctgc
      481 agggacatat tatgtacaat atccattcca atcaagcagg agtgcactgt gtggctgaat
      541 gagaagctta ttcttactcc acttagattt accctg
//
LOCUS       KCPA01000653             729 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 71626tic ultra-conserved element locus
            uce-3024, sequence.
ACCESSION   KCPA01000653
VERSION     KCPA01000653.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 729)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 729)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..729
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="71626tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>729
                     /note="ultra-conserved element locus uce-3024"
BASE COUNT          228 a          133 c          151 g          217 t
ORIGIN      
        1 aacgttctac aaatctgaca cattttgttc atgcatatcg tgttcatttt ctgtaactaa
       61 ccttgcttcc agcaaaatct tattctagtc caataaatga gacaagtaat tcatgataac
      121 aaaaataatt aaatagtagg agcaggttaa agatcagcat tcattttaaa attaaatttg
      181 cagtagttac ttagaagatt ggcaagtttt acaaataacg tcaccaagca ttttagagag
      241 aaacacagcc gcattagaat ggagtcatta ggcaatacat ttattttgaa gccaattaac
      301 cttttgtcag agaaatgtcg gagctgtaat ggtttcagca gtggaggtca gcctgtaaca
      361 gaggcacgta tgacagcgat tacgctgtct gacatatgct ggagactgag agtacagccg
      421 tggaatgaga atctgccttc gtttgtattc tgctctgcat tttcagggag cagacaatct
      481 tgacctatcc atttaggtaa ttaaagcttc tatttggaag tgtcctgcag gaaggtgaaa
      541 tctgggggag ataaatggct gctgttcact gtatccagcc acttccatca tttgatggac
      601 tgcctgaaac aggctgcatt gccaagtcct cataaaaata gagatgaatt gggcaggaga
      661 caattctcta aggcaaagca actctgtcat cttccttttt gcagcatata atttaattgt
      721 tagccaagg
//
LOCUS       KCPA01000654             423 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 71728tic ultra-conserved element locus
            uce-3398, sequence.
ACCESSION   KCPA01000654
VERSION     KCPA01000654.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 423)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 423)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="71728tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>423
                     /note="ultra-conserved element locus uce-3398"
BASE COUNT          117 a           79 c           83 g          144 t
ORIGIN      
        1 ttctctcttc cagaggataa aggcggtggc tgcccccaag gaagtgaatc gatggtccaa
       61 agaaacagag agtggcaccc ccttctgccc caatggaact tcaaatggcg gattgatcaa
      121 gccaactcat atcattgtgg aaaccatgat gtgagctctc tctgtgagag gataaacctg
      181 ctttaactgc cgtttactaa ccatagattc tcataggacc aggtttacag agctttatat
      241 ttgcactagg atttattttt atttctcaca gagaaagtta ttttttgtgt gtgttttttt
      301 ttttaatatt ttgtaaggta atcacagcag acgtctctct gtagagggag agctttcata
      361 tcagactaga catattacaa gaatttacta ttattgggtt ttttatatat atatctttat
      421 ctc
//
LOCUS       KCPA01000655             404 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 71829tic ultra-conserved element locus
            uce-1685, sequence.
ACCESSION   KCPA01000655
VERSION     KCPA01000655.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 404)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 404)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="71829tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>404
                     /note="ultra-conserved element locus uce-1685"
BASE COUNT          141 a           57 c           79 g          127 t
ORIGIN      
        1 gtttttctct cttttttttc aatgaagact gtaccaatta tcatttcaac ataaagtatt
       61 aggagatcaa ttgggaactg aatgccattt cctaatgtta atacagtgtt ttatttaagc
      121 tgccttgaca ggctgtctag gctgtgggaa aaagactgag caaataatga gtaaagggtt
      181 tagaaaaaag agagagggtg gagcttggca aacgatgtga gctattcatc aacaactcaa
      241 caaggatgat ggaaataata agtactcctt aaagaaaagg ggaaaggatt tttttaaagg
      301 aacagtttcc aaaaaaatat ttaactctaa ctttgtatta ctttctgatt agctgatttt
      361 aaacttcctg aaatcagcaa aagcttccct ttgaaatgga tagt
//
LOCUS       KCPA01000656             499 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 71938tic ultra-conserved element locus
            uce-5427, sequence.
ACCESSION   KCPA01000656
VERSION     KCPA01000656.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 499)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 499)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..499
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="71938tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>499
                     /note="ultra-conserved element locus uce-5427"
BASE COUNT          146 a          116 c          114 g          123 t
ORIGIN      
        1 attgttcacc cttggacgga gccctgactt ttgtgcctct ctgtggcagt cagacatttt
       61 tattgcaaaa tgccgtctgg aaaagatgca aaacaaaatt gctaaactac aaaaagaaga
      121 aaagggggga gaagaagcaa aaggccccct tccctttgct tattgagttc aaaggcataa
      181 catgcagcac cctgcagcaa atgggaagct acactaattt taaagccata aaatgctata
      241 aagtgccctg cggggcagga ctacactgga gctagttgca cctaaataag ccatggttca
      301 tttacttcgc agcttagcct aatgtaatca tcagcagatt cctagcctag agttgtaaca
      361 ggcacagggc cgctgccacc gaggcaacac tcccagccat ggaggggccg ctgccacatc
      421 gctgttgatt agaaaatttt tcagttttga caagccctta atgaacataa atcgctcctt
      481 gattggtttc tgtgtgggg
//
LOCUS       KCPA01000657             701 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 72049tic ultra-conserved element locus
            uce-6780, sequence.
ACCESSION   KCPA01000657
VERSION     KCPA01000657.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 701)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 701)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..701
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="72049tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>701
                     /note="ultra-conserved element locus uce-6780"
BASE COUNT          232 a          104 c          143 g          222 t
ORIGIN      
        1 gtaaaatgtt gcccctgggt gatgggttat gctcacagaa aggatttgaa cattcagact
       61 gcgctgtgcc ctgacagagg ctgcatgcta aaagacctgt tattttttcc tgactctgac
      121 tccaattaat gtacttttta aatgattaaa catatcatgc tgtgacttct gaaatgtcaa
      181 caagcttcga aacttgggag acaggaatgt aataaaatag gtaataggag attcaatagt
      241 taatagaggc cctgaagtgt gagtgtatac agtagctgca tattggaaac tgtgcaaatg
      301 aagatggctt agtattgcaa actggggaag aaaattgttt ttaattagca ccttcataag
      361 aactgctgat taatactgtt tggtttggtg aaaagctttc agctgagtaa tttgtacagc
      421 cattacaaca gttttgttag accaggactc ctgttgttaa acacaaacag cagatgataa
      481 tggtggaaga tgagtttgtc atgtaacaat ttaccttatt gaaaaaagct ttatataaaa
      541 cccaatacag taggtactag cagaaatcac atattttaaa tcctttcaag attgcagtgt
      601 gcaatgctag tttttttcat ggaggagaaa cagattttat atcatttata aaattatata
      661 tacaatttag aagtgttgta gcatggacag actactttac t
//
LOCUS       KCPA01000658             461 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 72153tic ultra-conserved element locus
            uce-6069, sequence.
ACCESSION   KCPA01000658
VERSION     KCPA01000658.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 461)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 461)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="72153tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>461
                     /note="ultra-conserved element locus uce-6069"
BASE COUNT          123 a           93 c          107 g          138 t
ORIGIN      
        1 tatatacaca atgcaaaaca aaatcctctg tctgcagatc catctttgct agggtctgct
       61 acttgttaaa tcagtatgaa tatctgtcag agatatcctg ctacaccatt tggctgatgt
      121 caaacctaaa caaaccagat cagaaaacca gcaagtggca gaacataaat gaaacgggag
      181 aagaccagtc taactgtaac tcgcatggtt tgcttgctga ttttttgggg ggagggggtg
      241 aggagggaaa tagtggcaat cactgcagtc atttgcagta ctaatgtcca attcagcctc
      301 ctttcattct cctgatttag gtggtcagag tggtttcgta gccgacatgg ggaagctgtg
      361 ctgcttagca ggctgtttaa tgggaaactg gcagtcttat ttcttttcta gatttggttt
      421 gtcactaggt ctccattaca tgccactcag ctttgatgtc t
//
LOCUS       KCPA01000659             599 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 72264tic ultra-conserved element locus
            uce-7314, sequence.
ACCESSION   KCPA01000659
VERSION     KCPA01000659.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 599)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 599)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..599
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="72264tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>599
                     /note="ultra-conserved element locus uce-7314"
BASE COUNT          186 a          148 c           93 g          172 t
ORIGIN      
        1 aaacacacta tctttgcaac cagcacaagg gcttgtggca agtttccctt actttcaaaa
       61 ggcacatcac taaggtggat ttgcttgtcc ctgctctaat gtcatgaaag ctgcccatta
      121 tctcacccac aggtaccgtc tcagttacct cattgcaggg ctcacactct gcgagagcaa
      181 gtgttgccaa gagatttcca ctgcaatttt caaagtcaca tcaaaccgac aaaacatcac
      241 aacgtattca gtgctgcctc attcaaacag ttcaagtttc cactgtaatt aaccctatcc
      301 tcgttaagat aattatgatc aagctccctg tcacagctaa tatcacagca tcattgccta
      361 tggctcacgc tttgccctca ttagcttaca aaaacacagc gctaaacagg aaactgactc
      421 cctctgcaaa acgacttaag atgttctcta agtagacagt aaataatcct ttagaataga
      481 aaggtctcag aaattacatt ttatgctggc taatcagtat gatttcttcc agctttcttt
      541 tccataattc attcatggtt tataacaaag atttaatcat aaaggaatgt catgacaga
//
LOCUS       KCPA01000660             332 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 72370tic ultra-conserved element locus
            uce-7789, sequence.
ACCESSION   KCPA01000660
VERSION     KCPA01000660.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 332)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 332)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="72370tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>332
                     /note="ultra-conserved element locus uce-7789"
BASE COUNT          101 a           68 c           55 g          108 t
ORIGIN      
        1 tttatatcaa ccccctcatc tagattctta gacacatcac tgcttaaaat tcagtcacct
       61 gacaaaaaca gttctaatta ttaccccctt gggctaacat ttttcagagt gactggctaa
      121 agtgcacgac agctcataat ttttatctct gacagtggaa gacataacct agtttcctct
      181 aatgctaatc tagagggcaa gacccttttc agtataacac tgaagggaga aaatgcaatt
      241 tgagcacagg gaaattgctc acatagtttg atagttctac tgttatatct ccaggattgg
      301 atgtcttgtt ttattttatg ctaaattatg ac
//
LOCUS       KCPA01000661             783 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 72478tic ultra-conserved element locus
            uce-5796, sequence.
ACCESSION   KCPA01000661
VERSION     KCPA01000661.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 783)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 783)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..783
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="72478tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>783
                     /note="ultra-conserved element locus uce-5796"
BASE COUNT          275 a          147 c          115 g          246 t
ORIGIN      
        1 catttggtac tctattgaag aagcatgctc acaacatgag ctacataaac tcattctcta
       61 aatgggaata ttttaagaga tatcaagtac agatgtttca aagtagaatt taaggtctcc
      121 atgggtgtcc ccaactggtg atcactctat tataagctta actcttcaca gacagagttc
      181 agattccaaa ttacccaact ttgcatcaag gaaaaatgac agttttgttt caacagttct
      241 ttgcacccac tacctaaaac aaaccatgaa catctgcaat ttcactgccc aatcctttct
      301 tgtaccctta caacatttgt tctgttaatg taggttaatt ctgcaaataa cacttctgta
      361 aattgttctt gcaaactgct acatcattta tgtaaggact tctgtgaact ttgaaaaatt
      421 aatgccttta attttggttg atggcaacat cagcagagct ctgtaaattg cactttaatg
      481 agattttgct acaggggata atctgctact gacagagtaa catcttgaaa acatctgtag
      541 acctataatt tttctatgac gattagatcc cacaacaaga gtccaaatac agtgcagaaa
      601 taaaggaaaa aatgtaaatt aacatccaac ctgttctttt aaaagaaaag agaaacaatg
      661 aaaagtttca tgcactgaaa ataaatcaat ttttctgact aattaacatt taactatatt
      721 taattaagaa agactattac tgtcttcact gctgtgcatc tgtatataat gaagcaaaca
      781 gca
//
LOCUS       KCPA01000662             779 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 72586tic ultra-conserved element locus
            uce-958, sequence.
ACCESSION   KCPA01000662
VERSION     KCPA01000662.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 779)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 779)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..779
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="72586tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>779
                     /note="ultra-conserved element locus uce-958"
BASE COUNT          244 a          143 c          144 g          248 t
ORIGIN      
        1 tgtgtgcctg ccagtaatgt gatcatggta atgagaaagc ttttaaagca aataatccat
       61 gtggttttga taagtaaaca acaaataaac tggttagaag ctcctttgac tttcaggaaa
      121 ggtgagatgt tataggttca ttaatatgta aagggtagta tgtagatctc aatgaaagtg
      181 acaaacaagt gccacagtgg gtattgctga acacaggaaa tggttggttt gagctaatat
      241 atacttttgg cactacttca tcttaaaatc atacatagca tctagcacca gcaggttggt
      301 tttatagctt catctattac tttactgtca ctgttaattg tcttctttta cctctgcagt
      361 attctacaaa ttgggcctat ccaaagtgac aggaggaaga acattaagca tctgacaaga
      421 tgatatctaa gttcaatttc ctactcttta cctgatttat acctgcagaa gataattttc
      481 ctttctgtca taaacagccc tataaatcag cagtgcttat ggaaccactg catagagagc
      541 ccccagcttt gtatcctctg tgtttcctat taggaagcca ttactgcaga attttcctcc
      601 ttcaaacaaa aatgatgaaa tttaatacca ctgagattac aaagattaag agctgaagta
      661 ctgctgaggc ttttcaattg aagcagctat ctgagcaatc tttgcaaaac tcaataaaaa
      721 cagggtttct gcctttgaca tcattatcca tctgcttgga tgaaattgct gtatcatgg
//
LOCUS       KCPA01000663             356 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 72686tic ultra-conserved element locus
            uce-3628, sequence.
ACCESSION   KCPA01000663
VERSION     KCPA01000663.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 356)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 356)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="72686tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>356
                     /note="ultra-conserved element locus uce-3628"
BASE COUNT          133 a           69 c           73 g           81 t
ORIGIN      
        1 cgcatggctg agaaatggca aggtgccaaa atgaaactgc tcctaatttt cagaggaggc
       61 caccggctaa ttacacagac tgcaggtgtg aagagagaag ctcaaagtaa tcaatagtag
      121 taattaatct gctagactgg agctaaagag ctaacagctg gacatcagaa atggacacat
      181 gcaacaagat cagcaataat tacctcttta aatattgaat ttccatagca acaattaagc
      241 atataaataa aggcttgaaa tcaaggctcc gaggcatgat gctgaattgc aaacacaaca
      301 ttctccaaat caaccgtttt aataaaacag taacaatatg cttgggctgg gtcgac
//
LOCUS       KCPA01000664             667 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 72785tic ultra-conserved element locus
            uce-6554, sequence.
ACCESSION   KCPA01000664
VERSION     KCPA01000664.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 667)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 667)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..667
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="72785tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>667
                     /note="ultra-conserved element locus uce-6554"
BASE COUNT          231 a          120 c          134 g          182 t
ORIGIN      
        1 gagaaagagc cctgactatc aagttgatgg caacttgagc caatatatac attctcagta
       61 gaaaacactg tatgaaaaca aatctaagct aaaaatgtaa taagcagcct tagcagttac
      121 atgttaagca gttcaaacca tactccaaag acacagccac tgaataaaca agaagatagt
      181 atttctgaag tagaattaaa tagctcaaag cagttttcaa aaagcaaaaa aacaggggag
      241 aaaaaaaagc aaaccaaacc cttttaggga ttactctgag gagtttattt actgtgtctt
      301 ttccataaag gatatatgga aatcagagag ctacagacac cactcatggc ctgttttgaa
      361 attcaaaaaa gagggggagg gaagagaaaa ctatattgtc ctttccaggc agaaagatgc
      421 tttccatttt ttctcaccat gactgtcata gtaatctgat atgacaaatt cacatacagt
      481 ggattagcag ccagtggaga aagcctaagc ggttaatatt tgttgatgtt gcttttatct
      541 agcaggtttg tgtccctggg ctgtggttac cttggcaata cggatataac cattttctga
      601 agctgttaaa aatgccaagg agattctctc ttcaaaattc cagggcctgc gggctgcttg
      661 tcatttt
//
LOCUS       KCPA01000665             425 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 72889tic ultra-conserved element locus
            uce-1679, sequence.
ACCESSION   KCPA01000665
VERSION     KCPA01000665.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 425)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 425)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="72889tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>425
                     /note="ultra-conserved element locus uce-1679"
BASE COUNT          120 a           73 c           76 g          156 t
ORIGIN      
        1 atttatatat tgacctacct ctggcatcat ttaaaggata taacaaaact acaattagtg
       61 ctgtgtaagt taatcttgcc ttttaagtta caaaagcatt gctgttttgt tattttattg
      121 atcaactttc atgcctttga aaatacaaat tccagaatga catcatgccc agtaggagta
      181 attaaagcta tctgatgagg gaatttagaa gctgaaaggg atgattgtaa ttgatcctga
      241 ttcaatccta ttacagcttt ttatagttta agctctagag aaagcaaact ccttgtcaag
      301 gctttatttt acggattcct ttgtgtgtgc tatgctctct actttccctt ttaatttttt
      361 ttttcctgta gtaaataatg agctgccgcc tgaaatccgg cttgccagtg gtcagctaat
      421 gggtg
//
LOCUS       KCPA01000666             717 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 73001tic ultra-conserved element locus
            uce-7077, sequence.
ACCESSION   KCPA01000666
VERSION     KCPA01000666.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 717)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 717)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..717
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="73001tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>717
                     /note="ultra-conserved element locus uce-7077"
BASE COUNT          229 a          167 c          149 g          172 t
ORIGIN      
        1 agtagtttat taatcccctc acaacacaga aaccaatgct cagccctgga aggagagtgg
       61 ggaagctgca gagtagtaac aatctcagca accctacgac tctctctctc tgatcccatt
      121 ataaactaac acaatatttt tctccaattt tcagtcggta ttgcagctcg cagcagaaaa
      181 gatactgaaa gcagcaggag ccaggcagag gtgtcagact ccagagcgga cactgccttg
      241 ggacctgggg gggccagtaa atcagtgcac gcttgtcaac agctccaagc tgcaggaatt
      301 actcgagcga aaataacaaa tggctgtcat tgtggagcca aaaacctgtg attataatta
      361 tcacatcccc agtgaccttg cataaacttt aatccctctc caatggagca tttaaatagc
      421 ctgcatctac tggcagggga ccgtgtcccc ttagttgaaa atacagagag taggaaagaa
      481 acgagccaca aagaaaccac caagcccctc tgtgtcttac agcttgtatt aagagttgta
      541 caagaaaagc cctgtcactg tcattttaat tgatattaca tagtcatcct gtattcaaaa
      601 tgccacgatg gtgtccaaac tcgctaatcc cagaagcatt ttaatcagat gaaaaggtca
      661 aataacacca agtttttatc acagcattca gaaagtgggt atacaaggtg tgtggat
//
LOCUS       KCPA01000667             649 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 73113tic ultra-conserved element locus
            uce-1749, sequence.
ACCESSION   KCPA01000667
VERSION     KCPA01000667.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 649)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 649)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..649
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="73113tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>649
                     /note="ultra-conserved element locus uce-1749"
BASE COUNT          208 a          100 c          114 g          227 t
ORIGIN      
        1 ttctagtatc attcagaaca cagcagaatc ctgaggtgtt aaatctttta tgcaggcata
       61 atggtgccaa cttcaacaaa tgttttatca gaagttagct tttcagatat gcactatatt
      121 atggtatatt aattgaaaaa cactgcttct ttttattaca tctccaaggt atcaatttaa
      181 taactatcaa agtagctagt gcagttgttg catttaaatt gatttacatg tcaagactgg
      241 cagtttagca gctgcgctat tattcctgga ttggtcaatt tacttgagaa aaacctacta
      301 ctgagttcta ctgacctgca tgacaatata ggccctattt ctattcctgt aattaggcct
      361 gcgactaact cagaatattt ttaattaaaa tattttggtc aatgtgttgc accaaattag
      421 gcctttcagt gcagatttaa ttctggaaat ggtgtgatta gaatatgtaa tgagttgtgt
      481 tcaatttgag attaacaggt tgtgcatctt gaacatacag gtactataga gatttactct
      541 gatcagttaa aaaaaatctg gtttgcatgt ctgatttgta aatttatcaa tactgtaaat
      601 aaaagacctc agacatacga agatatttca agacatttgt gtgaaggaa
//
LOCUS       KCPA01000668             365 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 73216tic ultra-conserved element locus
            uce-6668, sequence.
ACCESSION   KCPA01000668
VERSION     KCPA01000668.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 365)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 365)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="73216tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>365
                     /note="ultra-conserved element locus uce-6668"
BASE COUNT          109 a           89 c           78 g           89 t
ORIGIN      
        1 tactcctcag actccaaacc tcgtgaagtt aaaagtgtga agcggggact gttccatttt
       61 ctctgtgtgg ccataatggg gttatttatg gtacatgtag gaaagattaa aggttttcat
      121 aataaagaaa agcgagagct caagaactgg gtgcctccta acagcactga ctctcaagac
      181 aggataaatc acccaagcaa ccattaaaac ttcaagaaga ttgcttgtaa acctccaagc
      241 catgccagta aagcatattc cttgccacag agcagcccag atggtggagc tcagcagttt
      301 tagggctcct cacagcttaa ccctcctgtc tttctcctcg gagggcacag tgccaatgaa
      361 ccact
//
LOCUS       KCPA01000669             773 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 73328tic ultra-conserved element locus
            uce-7135, sequence.
ACCESSION   KCPA01000669
VERSION     KCPA01000669.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 773)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 773)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..773
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="73328tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>773
                     /note="ultra-conserved element locus uce-7135"
BASE COUNT          261 a          157 c          127 g          228 t
ORIGIN      
        1 catttttaaa ccctgtcgta taatttataa ccattatgta ctaatcattc cttgatggaa
       61 ctttcattta tgagactgaa ttaacgtcat ttcgagtagg cctgtctcag aatattaaaa
      121 ctgaccacca ggtttattca cttactagca gttaagtaac ttactttctt ttagactgtt
      181 ctatacttaa cattatagaa ggtcagctac tgacaagtca gaatgaaaca gatgcatgta
      241 aaaagaacat aaatatgtta aatgaaatac aggtatattt gctaagtcat gtacttacca
      301 ttagcactgc aaagttactg aagtgtgtac tctgaatggt ggtaatattg cctgcagaac
      361 taattatgtg gcacccttct ccccaccagc ctccatgtcc atctagaagg tcaaaatccc
      421 agaaggctgc aatggggtct ataccccgtg caaagtgcct caatcctata gtaagagggc
      481 tggtgaggtt tccgaaactg cacccatctg caaaaggaac aaactgaatc agagagaaaa
      541 ccctttagtg atcaacgctc tgtaaagaga acactaaact ataaaagcct gtgcacataa
      601 aatctcaaaa tcaaaggtag ttctgacatt agaaaagttt gcaatggtat aaatctgaac
      661 atttcaatca catattgtgc caaaatgatc taatcattcc tcacaaaaga gatccttctt
      721 attgtttcag attcttcagt tacgaccaat attacactat tgcccatgta act
//
LOCUS       KCPA01000670             758 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 73432tic ultra-conserved element locus
            uce-1817, sequence.
ACCESSION   KCPA01000670
VERSION     KCPA01000670.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 758)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 758)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..758
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="73432tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>758
                     /note="ultra-conserved element locus uce-1817"
BASE COUNT          214 a          161 c          173 g          210 t
ORIGIN      
        1 agatttacag ttctcccagg ccgagggggc gtttgaggtt ttactgtccc ctttggctgc
       61 ttgtctcgat atgtggaggg gcatataaaa actggagatt gaaaaagtta ccgtttctgt
      121 gtgggaataa atccagagac aagggtgggc cacaggagcc acagcactga ctgccctcct
      181 ggcccgggaa cacagcatca atggaccata agtgctcctg caatggcact ggatctgtgg
      241 cagctgtttg ttcaatgttt catgctttta gccacatctg ttccaaatga gtgttaatat
      301 tgcagtggca tccactaagg atgggctctg tcagctctac tgagcgtcag gctgaccctg
      361 gtgacaagga aagagcagtt cagcccacag tgctctctct ccctccgtat ctgtcttgcc
      421 ttgctccgct ccatcagaaa agaaaaggga aaactaaggc agtgattctc aaggagaaag
      481 actgcattta tttctagcac cctgtccagc aatgtcagat aacagtttat tcatcccctg
      541 gcccctgtat gacattgaag catatcaaca gtgacaaaag tatattgaat aattatcttg
      601 aaattaatac attatcccaa acttaaataa atgtcatctg atcaatatat cttggaatgg
      661 aaagggaaga gaatgtgaag ggcatcgctt cattattcat taattttaga gtaatgtagg
      721 cagatgaaat ggttatttca gagcactgct attatact
//
LOCUS       KCPA01000671             598 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 73541tic ultra-conserved element locus
            uce-3264, sequence.
ACCESSION   KCPA01000671
VERSION     KCPA01000671.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 598)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 598)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..598
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="73541tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>598
                     /note="ultra-conserved element locus uce-3264"
BASE COUNT          168 a          122 c          137 g          171 t
ORIGIN      
        1 tttttattac taagtggtaa aagacttccc catgcacttc cagtttcacc cactacctca
       61 cactggcggt aaatagtctg caaaaaatgt catttgctgg tggattgttt ttctgtttat
      121 tggaggtgac atgagcagtg gggcagtggc aaagaggccg tgttgccatt gctaaatata
      181 catccctgac agtctgataa tgggttccag gaagttcagt ggaaaattaa aacaaagcaa
      241 catttatagc tgattgaact tgaaaagcag ttttcatgtt gaatggcaaa tatgtagact
      301 tcagcattcc aggagactga tgcagctcca ctggatgggc ctgaccttgt gtgcagaatg
      361 gactgtggac acagcagcag gcagaatggc ttcatctata gaggacttca tggggaggaa
      421 aaatttgcta tcgtgcacag aaatagttct cacatacgcc tatatttata cagtgtccac
      481 aggtctgaat agcatctttc gtatgagggt tttgcagcct gttagcacta caagaatgtc
      541 tggtactggg actgtctttg tccctgccaa agcactaaaa atacccttcc atctatcc
//
LOCUS       KCPA01000672             410 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 73650tic ultra-conserved element locus
            uce-1430, sequence.
ACCESSION   KCPA01000672
VERSION     KCPA01000672.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 410)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 410)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="73650tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>410
                     /note="ultra-conserved element locus uce-1430"
BASE COUNT          145 a           80 c           76 g          109 t
ORIGIN      
        1 tttttcacca gctccaaatc cccggcatat gaccttctgt taaatagata aaaaaaaatt
       61 tgcttatcag tcatgcaaat gaggctgaat tcattttcca caacagatgg cctcatagat
      121 aatgatgatg gaagagagaa aattgaatgt ctctcacaag gtggtcatgg caaccaagag
      181 cagaataata tcaataataa gctcactgca taataaggtt gtcaatccca caaatcaaag
      241 tctccagcta aatcaggtat cccacccccc actagttatc aggtaaatag agaaatagag
      301 agcatccttt ttctttttaa acaagacact ggaaagaaat tgtagctcca gagcttccag
      361 ggtgcaaggg gaaagaaagg acaatagttg tgttttattt catgattctg
//
LOCUS       KCPA01000673             570 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 73758tic ultra-conserved element locus
            uce-5192, sequence.
ACCESSION   KCPA01000673
VERSION     KCPA01000673.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 570)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 570)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="73758tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>570
                     /note="ultra-conserved element locus uce-5192"
BASE COUNT          150 a          123 c          156 g          141 t
ORIGIN      
        1 cctgccgagc tgcccttgtg gctgccagcc tgactttgag gtcctcatta ttgtgggttt
       61 aaatgaagga tgttcatcca ggcagggcgg gggaggccaa tagacatcgg tgccgttatc
      121 tggtccttct atcaggccaa gtgacaggct tctcagggaa gaatgcaaag ctcatggtgg
      181 agacctcagc ctgacacaga aggtgactcc cctgactcta accttgaaag gaaaaagttc
      241 ccactttatt aaaatgaatt tcgaaagggc cgctctgaca gctgcataat taaatattgg
      301 agtgtcagcg ataatttatt ctgctcgcat ttggtggtca gagcctgctc actgtagggt
      361 cagcaagcac agtgacagag ccaaggatac actggattac ggggcccttt agccgtgcca
      421 gtgaaaggag agactgtaat ttttatttaa atagagaaaa caaagcagca aggaggtgag
      481 cagtgctctc agtagcaaaa attgtgaggg ataacgttgg aacttgtgct gaaatttgtc
      541 tggctccggg cactgggtca gccttgcctc
//
LOCUS       KCPA01000674             740 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 73869tic ultra-conserved element locus
            uce-65, sequence.
ACCESSION   KCPA01000674
VERSION     KCPA01000674.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 740)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 740)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..740
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="73869tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>740
                     /note="ultra-conserved element locus uce-65"
BASE COUNT          226 a          141 c          121 g          252 t
ORIGIN      
        1 tgtaatggtc gttaatggaa ctcttgtcta aaagctcttc ccaaaagtga taatataagt
       61 gcaagtcctt atcctaagtg tcttagtcta gactgaagca agagactcca ggtcagacat
      121 atgtgacaaa aagtgcattt tatttattca tgcatcttaa tgggaaatgt gtatttgaag
      181 aggctagcca attactctca gtttttaatt ctggcaatac attttcattg ttctaagggt
      241 taaaaacctc accgtgacaa tgatgagcct tattactcag tcaaagtaaa tggatcacca
      301 tataaccttt cagaaatgtt cttccttaag ctattaaaac attccatgcc cttagatggc
      361 aacaatttct ctgccttttg aaatttcttt tctatcctgc agagttcata gagatatgct
      421 tggttaaaat caacttatat aaaactatgc actgtaaatt ctgacacttc tgtttgaatc
      481 tcttttcaaa cacttgtctt tgctcaccat aatagatgtc agttcttctg atgtagttca
      541 agcatgagct tcatatgaag actcagctat gtctattgca tttctgaagc tactactcac
      601 tgaagttttg tgctgtttga catcaaagat aggcaagaat cacctgctga gttcacatgc
      661 atggagcaaa acatcttcaa atcacttgtg ctagacaaaa gtttttcata ttaagctttc
      721 actatcatgt ggacttaaag
//
LOCUS       KCPA01000675             386 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 73975tic ultra-conserved element locus
            uce-4417, sequence.
ACCESSION   KCPA01000675
VERSION     KCPA01000675.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 386)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 386)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="73975tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>386
                     /note="ultra-conserved element locus uce-4417"
BASE COUNT          112 a           70 c           61 g          143 t
ORIGIN      
        1 catgcagggc ttgaaacagg aacctgattc aataactcat gcatttattt ttaaaatgaa
       61 tcagattagt cccatgtgtg acctgccggt ccatctgtat gagctggact taatgggcac
      121 tcttctcacg cttacttcag tttgaagtat gagagagata aatttagttt aattttcaac
      181 agatcaagct atccattttc caaatggacc atctggatca gcctattaaa attaatttat
      241 aactttgcag tgtgaaaatt cgtttgttag cttaaataaa gttgccaaaa acttttgcca
      301 cttgtcattg tttttttctg gtctgttttc atactatgat tttcagttta tcccttcaaa
      361 atttaatttt gttagatcaa acactc
//
LOCUS       KCPA01000676             590 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 74085tic ultra-conserved element locus
            uce-4312, sequence.
ACCESSION   KCPA01000676
VERSION     KCPA01000676.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 590)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 590)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..590
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="74085tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>590
                     /note="ultra-conserved element locus uce-4312"
BASE COUNT          185 a          125 c          110 g          170 t
ORIGIN      
        1 caagcactgc gctgcctgga ctccaggact cttttcccca aatgtactac ataaaaccag
       61 cacaaacctt caacagaata tgcagataaa caaagtaaaa tggggagaac agggatgcat
      121 agaaagaaat caagggctac cttctgagct ttgccaaaaa gcgtatgctt tcattcggaa
      181 tgcagtgcga aaacgctcct tattattcaa gacaacattc ttaggctctt ttgaaggact
      241 ttcttcaatg gcatctacat tcagaggggt aaatagcttt cctttagtat tggtaccacg
      301 aacccgatcc aagagaccca gcttttggct acaaaataag caaaagtaat cattttcctc
      361 ctttgtacac tattaacttg tttttatgat gctttgtata taatgggctt tttgtataca
      421 aggacactgc tggggctacc ataatgtctt tgtaagcaac agttaagctc cacagataat
      481 taatttttat aagcatatca atgttgaaaa tgttaccaga gggtctgtat cctctccatg
      541 caaggcagtg tttcagctca cacagcacac ctgaagcagt agttttgtaa
//
LOCUS       KCPA01000677             415 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 74186tic ultra-conserved element locus
            uce-2703, sequence.
ACCESSION   KCPA01000677
VERSION     KCPA01000677.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 415)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 415)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..415
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="74186tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>415
                     /note="ultra-conserved element locus uce-2703"
BASE COUNT          118 a           74 c           89 g          134 t
ORIGIN      
        1 tgatccgcaa agctttttga agtcctaatg aacctgattg caggaacatt tataatcccc
       61 catggcttta aatgaaatca gatataatca ggagctatgg ggaaagggag tgtttacagg
      121 cagagattgg gaagtgctgc tgtattagta aagatgctgc tccttctatt gatgtctaaa
      181 atgatggata atgtgagaat ggcaaatata ctatttgtct aatggctctg caattaaatt
      241 cccctgtaaa tgacccatgc ctcatttcat cctaatctat ggaattttga ttgaattcgt
      301 cagctctaat tgaaaaatac tgcactttaa tgtctgcagt gccgtttcag gaccgcgctg
      361 gttttaatga gacggtgccc ctctgacctg ggaatatttt agacttttat ttagg
//
LOCUS       KCPA01000678             592 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 74295tic ultra-conserved element locus
            uce-4522, sequence.
ACCESSION   KCPA01000678
VERSION     KCPA01000678.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 592)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 592)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..592
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="74295tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>592
                     /note="ultra-conserved element locus uce-4522"
BASE COUNT          160 a          101 c          131 g          200 t
ORIGIN      
        1 gcctgtgtga cagcagacac tctggccgtt gtttgattgc tgtctgggtc aggagatcag
       61 ctttttctac gagatgtagt gtgttagtgg acaggttgga aggcaagtta cagctgcctt
      121 tcttaggcat attactgtcg agtctcgttg ttttgggttt tttactgtac atcagcaata
      181 atatagcttc tgaagactgc atgtgacagg ttaggcattt tatcctttga gtaaacagta
      241 atcatggtgt gaagaaagtg aggcattgga gatttttccc attctttgag atttccattc
      301 ttcctttcta gtttgctcca agggctcttt ggggatacat atattaagcc ctttaaatag
      361 ttcataataa atctttgtct cgggttgatt ctgacagttt tttaaagagt cttttaagag
      421 acaatcctca atcatttact aatccatggg gtgatcttca gacttggaga aaaagaaaca
      481 gttcaagctc tgggattgtg aagatacaat gtagaaaaat tttaactcag aaaaactcag
      541 aaaatacgga aatttcacca gtccgtgttc tgccggtgct taaaagctca tt
//
LOCUS       KCPA01000679             731 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 74405tic ultra-conserved element locus
            uce-2299, sequence.
ACCESSION   KCPA01000679
VERSION     KCPA01000679.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 731)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 731)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..731
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="74405tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>731
                     /note="ultra-conserved element locus uce-2299"
BASE COUNT          241 a          114 c          140 g          236 t
ORIGIN      
        1 agctgtgatt gaggttttaa atctatgaat atataatact atatttgcag atgttatggt
       61 taaaaggaca agaagggata tatgttaata atattttgat tctgctgtat tagtagcagc
      121 ttgctaaagt ggcctgccat caaatagtat ttatagcaat gtataaaaca tattagtgac
      181 atccctttta tattcaaaag ctttagctaa tattactgtc tgcatacaaa gcagagctca
      241 ctgcctaaaa gctggtcaat aaacatttta gtactgctct attccagtga tctgaattca
      301 ataatgttac ctttccagaa gctgcaaaat ggaaagtgaa agaatgattt atgaagctta
      361 gctatgcatg gccagataag aaagctttaa ctgatgcttg caggattctc cttaatgaag
      421 tacaagttgc caagataagt ttaggtaaat gaagcctctg tcacaatatg ttacagcaaa
      481 agaaatgaca gagacagcag agcagatgga ggttattaca gaacagtggt gtcaagaatt
      541 gtagtctagg taactgcaca aagacaacag atgcattggg tttgttatta atggtttcac
      601 aatggcagtg ggtatttcta gaatctgttt aaattaagcc tagcaaggtt ttcccttaaa
      661 ttgtcattta gccttcactg agttcatatt attcagccat cacactcttt tgagtagaat
      721 tcttctcttt c
//
LOCUS       KCPA01000680             759 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 74518tic ultra-conserved element locus
            uce-1865, sequence.
ACCESSION   KCPA01000680
VERSION     KCPA01000680.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 759)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 759)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..759
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="74518tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>759
                     /note="ultra-conserved element locus uce-1865"
BASE COUNT          262 a          117 c          153 g          227 t
ORIGIN      
        1 tgcacatttc agtgttttgg ggagaaggag gcaacagaga aaatgcaaaa taaatctaaa
       61 ccacatttga ttctttcaat ctataataaa tctaaatgat ttaccagagc ataaaattct
      121 cacatgcact gaatattcta ttcatgtgca agagtcactt attcatttat aattagataa
      181 aatgaactgc aattttttaa gaaaaaattt gcatgtggca acagtaatgt attaaagggt
      241 ggcactttgt taccatccat ttgttagtca ggacactgga gctgcaattt aatagacaag
      301 aaataagtac agtagaggaa gggaaaaaat taaattccgc gtgatcagca aggtttcgaa
      361 caatcgctag ccaactgaag tgggtgccat atctataagt cattttgttt tataggccat
      421 taggatctcc tgagagaggc tgcatggaga ccgctgcttt ttgttgaaat taaaatgtca
      481 gagaaaaaga aatagaacaa aacagggaat ctgcaattaa ttacaaggcc ataaaaattc
      541 aataatcagg aggcagtgct gctgtaggca cagcggtatc tgattcaggc taacaggaat
      601 ggaatacatt aatcttttca aattagtttt ttaatctgac agggatatat agtgacgtgt
      661 tcttttactg tttgagcaga gctgctgtct aatatataat gctgagtgtc tggaattagg
      721 acatctatag ccattttgtg actacaacat tttcacggc
//
LOCUS       KCPA01000681             598 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 74624tic ultra-conserved element locus
            uce-5732, sequence.
ACCESSION   KCPA01000681
VERSION     KCPA01000681.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 598)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 598)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..598
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="74624tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>598
                     /note="ultra-conserved element locus uce-5732"
BASE COUNT          190 a          111 c          124 g          173 t
ORIGIN      
        1 tgtggcttca aatttacaac cagggcatat aatctcattg taagaagaga gtcaagttca
       61 agaacttagc ctctacagta aagctctcat tttaactaaa gaagctgagg tcgacggcct
      121 ctcaaatgaa acagataagg cgacataggg ttcttgtcag aaacaaatgt tatgtctctc
      181 cctactgaaa agcttaaaga tattatcagc aaaagcctag ttgggcctga aatgggtccc
      241 agagaagtaa tattaaccag gctcctggca gatcatttat ttatctcaag ctaaattcaa
      301 taaagagagc catatataag tgagggaaaa taatgcagct gctagtaatt tatcattgga
      361 tggaaagtca ttgttatcct tatctctcca atgatgttct atttccaact ggtaatgaat
      421 tatggggctt gccacatctt tactatgtga caggtcaacc ctacctcatg ggtactgtac
      481 tgtatttatg caatcaatag agagtttgaa aatattggca accattttgc gagactgacc
      541 tgggacggtg gtggtcagtg gatggagcag catttctctg ctcctttaaa acaaagat
//
LOCUS       KCPA01000682             760 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 74845tic ultra-conserved element locus
            uce-1793, sequence.
ACCESSION   KCPA01000682
VERSION     KCPA01000682.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 760)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 760)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..760
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="74845tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>760
                     /note="ultra-conserved element locus uce-1793"
BASE COUNT          276 a          129 c          131 g          224 t
ORIGIN      
        1 aaaaactgtt aatgcagcct ttgaataagt gctaccctgc tctttaaatg ctaaagttca
       61 ctaaaactcc agtgatttat gtgcagcttt tgactgccag cacctggcag atgaagaaac
      121 ctactcaagc ttcagtcata aacagatagc atacaattta attttaatgt gctcgttagt
      181 cgtagcacat ttcagacata attgtgaacg caacacaaaa ttatagcaaa aagacaattt
      241 taatgctgct gtagaaaaaa aggttatatg aagagtcata taatggtgct tcattgtcaa
      301 caacaaaaca gggcacagag tgcattacag tgtctgtgct gtttacatgc caatatttta
      361 tacatagatt ctcatatggt gtcagctgtc agttacttct gcaaattaac tgccaaaaat
      421 ggagacgaac agaatcactt agtgtgctgg taaccacggg ttacctttca tatgcctaaa
      481 gataaagctg cagtatggaa tcttgggaga ataattaggc agaacaaaac agaaagttac
      541 caattgaaat aaaaaggcat tctacaatag gaaataacaa ccaagagcgc ttataaataa
      601 gtaaaagagg ttatatcaca gaatgcctca taacttttta agcaaagtat tacagtacaa
      661 acattttaaa ggctttatca atgtttagga aatacagtac aagtttttca aatagattta
      721 accctttgag cactgagttt attttgaatt atctcttttt
//
LOCUS       KCPA01000683             806 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 74958tic ultra-conserved element locus
            uce-2125, sequence.
ACCESSION   KCPA01000683
VERSION     KCPA01000683.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 806)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 806)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..806
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="74958tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>806
                     /note="ultra-conserved element locus uce-2125"
BASE COUNT          228 a          138 c          180 g          260 t
ORIGIN      
        1 ggttccgggc tgggaagcac cttgtgtgct acagcttctg tgtgaggtga acatacctga
       61 gggggagagc accactgcgt cctgtggaag gttaacatga agtgagcttt taattaagtg
      121 gggaaaaagg gggcatttta cttcaatcag attaaattgg ccctctcttc agtgtgcgag
      181 cgataccaaa gtagcactgg gtcaaaagat ctgagatcac tcatttgcag tacagcagca
      241 atatggttta caggtaatac tattatcaac ctactttttt aactatctgt tagactaact
      301 tgtttaaatg agaaaggaag ccctgggcac aaagggatct tcatgttcat ttggtgtatt
      361 aggagaggca cccagttaaa gagtgttcat tactattgta aattcctgcc ccagggcttg
      421 tatccttgca ctagattaca tgaggtctat gttcatggac agcgtttggc gtctgattga
      481 aggtccagcg cagctaatta atttcattag gaagtgaagt catcttctag caggaattaa
      541 tatttggagc ttcgtgttgc taattcattt ccagatttaa ttagctcaga gaagaaatgt
      601 tgcttgggca agaggacttt ttaattatca gcttggataa atttgaaaat gttgatgcct
      661 aggggttgag ttaattaaaa cctgcattat tttaacttta attagctccc atctttgttt
      721 tgcttcacca tatggccatg tcctgtagtc aaatttagtt aattaagcta attaagctaa
      781 tcattttaat tactcaagac aatatg
//
LOCUS       KCPA01000684             686 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 75067tic ultra-conserved element locus
            uce-1809, sequence.
ACCESSION   KCPA01000684
VERSION     KCPA01000684.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 686)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 686)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..686
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="75067tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>686
                     /note="ultra-conserved element locus uce-1809"
BASE COUNT          204 a          121 c          147 g          214 t
ORIGIN      
        1 tatctggctt actgaaaagc tatgctcaga aagaattatc atgaatgatg gagttctttt
       61 tgcttctggc aactataggt cttttctgaa tacagcaaat gactgtttca aaatgaaaac
      121 cactatgtgt ttgaatgtag tattatgcct agttgctttt tgagtgaaag gcggctttaa
      181 aaagttaggt atatcattgc caaaaagggc tacatagtat tgtcagcatt ttgagaagga
      241 ataggtcctt tttttcctga aactccattc tggacagctg ttagtgactt accaaacttt
      301 tcatatggat atgtatgtta atgacaggca atgaactgga gatgaagaga cccaaacaca
      361 gaccgatctc ttcagtgcac atcaaaagcc tttacaaaag gagcagtaaa agaggcagtg
      421 atggtggagc cttcactttt gtacactgaa ttagttctgc aagcaatgaa actgatcttt
      481 tctccttgcc agaaaagtct ggtgattttt gtgagtgctc attagcacaa gaggcatttg
      541 tgaagataat tgactgacgc tgatactgct ggctgtcaca acagtgccag cagtgtatgt
      601 gcgtttttaa tagttgtacc cctttcttag atataaagct ctctgaaaga tactggctct
      661 ctaaagttct acgggcctat gcaaag
//
LOCUS       KCPA01000685             761 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 75181tic ultra-conserved element locus
            uce-2487, sequence.
ACCESSION   KCPA01000685
VERSION     KCPA01000685.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 761)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 761)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..761
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="75181tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>761
                     /note="ultra-conserved element locus uce-2487"
BASE COUNT          239 a          132 c          151 g          239 t
ORIGIN      
        1 atctgacatg caatataatt tactctattt ttgctattaa tacaaatgct tcctgctgtt
       61 ctgaaaatcc actatttctt aatccagcat tattgtcctc ttaatgcaac atttcaaacc
      121 catttcgctc cattttctgt tagaaaagaa aaaggaagat taaaaaggaa ccaggtatca
      181 ttggttcata tgcatatggg ttcagcatgt gaggatgctg tttctaggac tggccttaag
      241 atgtgactga tagatcttat ttgtctgata gagttgacca gggaaataga gctacagctg
      301 gttacttcat taggtcctct cattgattga accctgctga agtgatgcag caggctcctg
      361 agataactgc tggtaataga acaaaatgaa ttcttatcac agagattgga aaggccatta
      421 accctggcct ccaatgcttt tcagaggtca cagacaggaa gccaagcggt gactgggaaa
      481 actgttttgt gtctaactac aggtcatgtt agagggggtc tgtgactttt ttacccttcg
      541 gcttctgtac agatgaaact gttacactgg cagatgttaa taatcagctg taaataaata
      601 ttggaagcag aagaagaaaa atgagaaagc acaggaattt ttttcaataa atatttaata
      661 aaagagcaat tgtttctgtg atatttactg ccagttctgc tgtagatttt tgcctaatac
      721 ttttccatat aaattgaaaa gagaaataca tacaggcact t
//
LOCUS       KCPA01000686             575 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 75289tic ultra-conserved element locus
            uce-7163, sequence.
ACCESSION   KCPA01000686
VERSION     KCPA01000686.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 575)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 575)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="75289tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>575
                     /note="ultra-conserved element locus uce-7163"
BASE COUNT          155 a          155 c          151 g          114 t
ORIGIN      
        1 tgaggggcac cccagcaaca atcaccctat ggacctaggg aaacagagac aggactgctg
       61 caaaggaaca gacaccagaa ccaaagggat aagctacaga tgggccttcc attgcccaag
      121 ggaaggagga ggagacacca cacagtggcc agctgcaaaa ggccagtggg aggcaggact
      181 tactcatctt tttacacaca gccatacaat actcctctga ctcaaaattg ttcctgttgc
      241 ctccgcagcc tccatatata aagcgaatgc actttctctt gttaggatcg aagtaccaac
      301 gaggcatcac agcccggcag ggccctgtca tggcctcctg ggagcagaca gctgtgtgga
      361 gacgggtgag aacatgagct gaggagcaca ggccttgccg agcgatttac aggtggctct
      421 acttcactct gaggcacggc ctcaacattg ctgctgcacc aacccaaggg cttctgtcag
      481 acattccaaa gcaagctggt cagggtgtgg tgctttggaa atagccaagc agcttgctcc
      541 tctacatgga agtctcatct gtgagagatt tctcc
//
LOCUS       KCPA01000687             653 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 75399tic ultra-conserved element locus
            uce-7472, sequence.
ACCESSION   KCPA01000687
VERSION     KCPA01000687.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 653)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 653)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..653
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="75399tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>653
                     /note="ultra-conserved element locus uce-7472"
BASE COUNT          181 a          130 c          124 g          218 t
ORIGIN      
        1 cccaccgctg gctttacatc tcagctaaat ttgaattgat gatgggtaca gtgtttgtaa
       61 tcctacatca agcagtgctt gtgtctgcca tttatttgtc ctgttgcttt ggcagcttct
      121 tccagagcct cctctcatct gacatgtcag gtctacaatc aaagaggaat agtgaattca
      181 cttttacagt taggcaagct gaatgctatt acccatgtat ttgtcaccaa cctgcagatc
      241 ccagcctcta atctgccatc tggatggatg ctacaaagtt aagagccagg gacatgcatt
      301 tctcagtaac tacctgctgt cagctattat tttaaggatc ctgtgatttt cttttatttt
      361 gactagaaaa aacaaggcag ctgcagtaat aaaaaggcat atcaactagt cacttcctgg
      421 cagatttgtc actggtgtgg atacagcagt ggtatttttt gttagcaaat gtatacagtg
      481 gaatatagta ttgtaaatct gtagtgcgtt cttcacaaag ggcccttttt agaaccttgt
      541 atacagtcaa caaaataaac gtatttgctc tcactctatt gtgcacatgt attatatttt
      601 acaatattgt ccattgtgtg caacagactt tgtaaatatc gtgggtttaa aaa
//
LOCUS       KCPA01000688             835 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 75510tic ultra-conserved element locus
            uce-396, sequence.
ACCESSION   KCPA01000688
VERSION     KCPA01000688.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 835)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 835)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..835
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="75510tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>835
                     /note="ultra-conserved element locus uce-396"
BASE COUNT          257 a          151 c          158 g          269 t
ORIGIN      
        1 gggagttttt tgacctcttg gctattcata ttgttagcag gtatgaaatt aagaactcgg
       61 gagggattta ttgtgatgac aggctctaac acatttggta catttggtaa actcttagtc
      121 ttctcaaagt gcagaaactg attccaataa aaatacagat aaatcagttt tgtgaaaaaa
      181 atttaagaga ggatgctgtt tacaaaacca tgatgctact tctaaagctg ccagttcaaa
      241 cattttgtgt gatatgctgt gctattgaaa gggttaagct tttctgactt tcagatacaa
      301 tgaaattatg acaggaagaa aattgtgcca ttttagcatg aaaatgcttg tacaaatact
      361 gtcgttcctt ccttcttact ttctttataa tgcctcaacg atagctaaga tgacagacat
      421 ttgacaggta tctgtaagca tacaacccag gcagctcatt aaagtttttc tttctatgca
      481 tcagctttca caaaggcaaa aacccattag cattgactat tttgcagatt agaagaatta
      541 agggcttcaa acgttggctt ataccaagca atgtcatttg tgaagtgatg tttgctttat
      601 tatttccctt tctctccctc tgaaaccaga ctgacatgac tttagctcaa cgtagggcgt
      661 aatgtgcaaa ccaaaggact ggctcaccga tgaaaagaaa cacattccct tttatacatg
      721 actggaatgg caaaaagggg agactttaca tgtactattt aggctcatta gagtactgat
      781 tatgatagtt ctccggtgta atctttaatc gactttgaca ctagatttgc cccgt
//
LOCUS       KCPA01000689             782 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 75623tic ultra-conserved element locus
            uce-7209, sequence.
ACCESSION   KCPA01000689
VERSION     KCPA01000689.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 782)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 782)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..782
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="75623tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>782
                     /note="ultra-conserved element locus uce-7209"
BASE COUNT          208 a          149 c          238 g          187 t
ORIGIN      
        1 gataaggtta ctctggaact tgaatgtttt cccacaaaat tcacaggact tgctcttggc
       61 ctgaggctgg ggaggtgtag tgctgctggg gggcatgggg ggcagtggcg gggtgctcaa
      121 aaaaggtgat ttaggacttg gctggaaagg attcaacaga cgatgcatag ggttggtgcg
      181 actgggtgag actggcggag gggtggaact gtttcctgcc agctctcgaa gccttctgga
      241 gaaatccatc gctggggact caattgccat ggggtttaaa cgcataactc tgtcaaaggc
      301 actgggatgc tgggcaacta accccatttc ttcggcacta aggcgatgtg gatccagatg
      361 atgacgaggc ggtgggctga acagcggagg cgtgtttggg agccgaccct caccaaagcc
      421 agggtgttca cgcaagatgg gtcctgtcat gcgcaaaagg ttgaaagggt tgttgtctcc
      481 aagaaaattc atcagcgggg actgtgcaac agtctccggt cccagaggag gagggatggt
      541 gatgcgtgga gtaagggaac tgtttgaagg gcttgtttcc aggtagatgc ggaatccatg
      601 tgtgttctgg gcatgctgaa gcaagaacca agcgctatta aaaggctgct tgcatgttgt
      661 gcaaatatag cttgaaggct catctttacc tataaaagaa aaaacagaaa gaacacttaa
      721 aaaataatac agcagagaac atttaaatac agttggcatt cattttattt tgctaacaca
      781 tt
//
LOCUS       KCPA01000690             384 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 75729tic ultra-conserved element locus
            uce-4299, sequence.
ACCESSION   KCPA01000690
VERSION     KCPA01000690.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 384)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 384)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="75729tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>384
                     /note="ultra-conserved element locus uce-4299"
BASE COUNT          120 a           90 c           65 g          109 t
ORIGIN      
        1 aatcccaaac acagacccat aaaaaattca ctctgccccc gtcaacacgt ggcagactaa
       61 atccgaacgc ctccttccca cttgcggggt tgtagggttt ttttttttcc agagcatctt
      121 gagcagataa tcagatcgtg ctgacattca gcagtaatca attagcgcct actttagatt
      181 aaattgagaa tatgtaaatt ggactcctca tcaggcacca cagtcaacat tgcagagaca
      241 ctcaccatgc tctgaacata tcaaacagat gaaatgcaga agttgttcca aatcctgttc
      301 caaaatagga agccaggtga gctatatgaa ccatttaaga ttacttttgg ttttaactta
      361 ttagcttctg ttaaattaac ctct
//
LOCUS       KCPA01000691             570 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 75834tic ultra-conserved element locus
            uce-6731, sequence.
ACCESSION   KCPA01000691
VERSION     KCPA01000691.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 570)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 570)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="75834tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>570
                     /note="ultra-conserved element locus uce-6731"
BASE COUNT          166 a          109 c           97 g          198 t
ORIGIN      
        1 ttttctgttt gtataatgtt gtgattaaat atggtggagc cccagggagt gaatttttta
       61 tttgaaggtt aagccaatat tagcaaaaaa taaaataaaa ttaatcaaat ggcccagagc
      121 atcacagcca cagttgattc caagaatgct tggttacaaa atgagcaact gactaattgt
      181 gtaaatgctg ttaattagct gtgcagagcc cctaactggg ctattccctg taactaataa
      241 gaaatcaatt agctaatgaa gtggccatta aatgctatgc taatcttagc tgggatattt
      301 ttaatgtttc ttcttcttct tctttttttt ccttctttat gatccttcct aattgccatt
      361 gccatacgga gctcacagct ttcagcatgt ctaatgaaac atcattatat cataactggc
      421 attcttggaa gagttagtgg caaacctgct tcccaattat ttttaattgc cagacatact
      481 cataactggg ccttctacca agtagttcag atccctgcac tgtcacgtaa tatacccaaa
      541 gattgtgttt tcttttcttt gcatatgcag
//
LOCUS       KCPA01000692             379 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 75934tic ultra-conserved element locus
            uce-674, sequence.
ACCESSION   KCPA01000692
VERSION     KCPA01000692.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 379)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 379)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..379
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="75934tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>379
                     /note="ultra-conserved element locus uce-674"
BASE COUNT          128 a           80 c           65 g          106 t
ORIGIN      
        1 aaagcactat cataaattca aaaaaagtat atcttaatga tacacttaga gtaaatcatt
       61 tgccttgaga gacaggaggt ctctggtgac ctgtatggca gccacaagag actaccaggc
      121 tagctacttt cagctaaatg tactctcata ttaatatttt aaaatgccat aatgcctctc
      181 tgaaaacctc agaggacaga tacatcaatt tgcgaggtct tcactccagg aaatagaaac
      241 agggataatc tgccattaaa agaaatagtt cattatgtct gcttcttggg agcacataaa
      301 ctatgtccct cacatactta tgttgcaaat cctcacttta atgtgaaggg aaacaccatg
      361 ccccagagct ttattgtcc
//
LOCUS       KCPA01000693             902 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 76044tic ultra-conserved element locus
            uce-325, sequence.
ACCESSION   KCPA01000693
VERSION     KCPA01000693.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 902)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 902)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..902
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="76044tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>902
                     /note="ultra-conserved element locus uce-325"
BASE COUNT          267 a          196 c          157 g          282 t
ORIGIN      
        1 aaagcaacac ttgaaattca ttttgcccac ttgtttttgt ctgagtcaga atctaaatca
       61 acagagatca gactgtagct tgtgagcaaa tttccttaac aaacaaaaaa agatacccat
      121 cctcctcata ctttatgcac agtaatgcaa gttattttcc actccattta gacttttcac
      181 cttcctttca tttaccctgt tttttacagt tcaataaata tttttccaag ctccacttgc
      241 caaacaaaag agtttagctt cagtgttact cctctgacaa atatccttat ggtgttgcac
      301 atgtgagcca ttgataaaca aattaaaatt ctgtcccagc tcagagctca gctggcccat
      361 ttcatcttgc ggtatgggtt tgtaaaggtc tgggtgtctg tcatcctccc ctaaccttgt
      421 ctttgtcaaa gggatacaaa agcctgcacg ctcggggcct tacgatactg attagtgtga
      481 gtgacaaagt ggagtagcaa gtccactcag cccttcataa taaatctatc aaagagtaat
      541 agaattccat caattctgca tcatccccga gggtcgctgt gctgggatgg aaagtgtgtt
      601 ccgctgggat tgtacaactg ttattattca attacactct tttcttccta gttaaagacc
      661 atgatatcat tatcacttaa tgaatacata taattggatc tggactctat gtttggctga
      721 tgaataccac tcactattca ttcagtctca gctcatcttc tgaccattta ttatagactt
      781 ttggctgaaa accatgatga caaagggaat ttgaaattag ctgagaattc attcaatgct
      841 cggttagaca caaaggcaaa atacaattct gacgcgtaaa tgaggctgag accacacaga
      901 ga
//
LOCUS       KCPA01000694             469 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 76153tic ultra-conserved element locus
            uce-6863, sequence.
ACCESSION   KCPA01000694
VERSION     KCPA01000694.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 469)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 469)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="76153tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>469
                     /note="ultra-conserved element locus uce-6863"
BASE COUNT          167 a           92 c           97 g          113 t
ORIGIN      
        1 tttataaatt agtagtcata tatttacaat aaccactaaa tcaacagatg gttccagagt
       61 acactgaacc aattaaatcc aaattctaaa gactgcagcc aagaataaaa acaagcaagt
      121 tggagaaaca tatttaaaga cacggaaaga aaacctggca agagtcccta tgtctgtgtg
      181 cagttaacct ctgttgttaa cactgaagga aatgccaccc agtaaatgga ggagagctat
      241 aaaaataaaa caacatctgt ataaattttg ctaacacttg cctcctatga cccatgtatt
      301 cagaaaatgc ccagcgtcaa aaaagcagac gactgccctg tgttatttgg gtcactgtgg
      361 gcaaatggtg gggtaaacag cagtggtgta cttccagggt tctgttagcc aaatcctgca
      421 cagctagagc tctgacagag gactccatgg gtgaaaagta atactggag
//
LOCUS       KCPA01000695             710 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 76260tic ultra-conserved element locus
            uce-1239, sequence.
ACCESSION   KCPA01000695
VERSION     KCPA01000695.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 710)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 710)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..710
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="76260tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>710
                     /note="ultra-conserved element locus uce-1239"
BASE COUNT          196 a          185 c          143 g          186 t
ORIGIN      
        1 ctggactcca gctctttggg caggccagcc tcggggcttg ggagagaggg agacactgcc
       61 ctcaaatgcc accaacagca gcttctcctt caaagccttc caccccctcc tggacttggg
      121 aaggggtcgt ggggatggag gctgggaggg taggacagca cctctttccc gttcaccaag
      181 gtttgattcc ctttacgagc acgatccgcc aatccgtaat caagggttaa tttcacagct
      241 cactgcttca tctagcataa tatccattca gactaattaa atctgtctaa taatgtgagt
      301 gtctttgtct ttgttctttc cattctttgt tttacaccct tcacatctca tctccagaac
      361 tacacgccat cacactctgc ttgacaagca gaatccatcc ctaaaattaa aacattcctg
      421 acctatctgc gatgacaagg caagcaagct tcacagcgct gcggcccatg aagggagctg
      481 acacatttgt ttttaatttc aaaagagtag aaagtgaaga tctgaccctg tcaatcaggc
      541 cctgtgacaa gtttaatcat tgctgcccca caaaaatcac ggctaaatag gaatgcaaat
      601 aatgtatcac agggctctta taaatgctaa tcaaggagaa gtaatcaact gacaatttca
      661 ctgatctcct ttctgaagaa gtcagtcaat gcactgtctc tggaccacaa
//
LOCUS       KCPA01000696             598 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 76371tic ultra-conserved element locus
            uce-7320, sequence.
ACCESSION   KCPA01000696
VERSION     KCPA01000696.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 598)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 598)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..598
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="76371tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>598
                     /note="ultra-conserved element locus uce-7320"
BASE COUNT          194 a          120 c          108 g          176 t
ORIGIN      
        1 aaaacagatt gtgacacagg gcagtgattt tttttaacaa tcctattatg aaagacagag
       61 tgctcccatt tcctttgcag cttttatcaa gacttaaatt gctgccaagg gagaagggaa
      121 cctcactgct tttattttat ttttaattag ttactaaatt cctgcctaag tctcctccga
      181 gcagagatcc aacagtatcc ctattaaatt atatagagcg agtccagtcc ttggctgtca
      241 gcgggaccca tcagtcctaa tttatcgccc caggaaacac agtacaatta tggtaataaa
      301 taataatagg attcagtaca tgacaacatg aatgatggag cctctcagaa ctcatttaca
      361 ttgctttgtg ttgcaatcac cctgcttcta atgtaatgcc aagcaaatga gcctttttga
      421 atattgtgca atctattgca agtcaactgg cacaaaactc actcaataaa tcatgttcaa
      481 acacatgcct ctaatgacag gtaaatcaac aatgaagtaa ttgcatttaa tgtattgaaa
      541 tactggacaa aaacagtgac ctcgaagtga ctttttggag aagggttgca gtggcaga
//
LOCUS       KCPA01000697             669 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 76478tic ultra-conserved element locus
            uce-7074, sequence.
ACCESSION   KCPA01000697
VERSION     KCPA01000697.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 669)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 669)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..669
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="76478tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>669
                     /note="ultra-conserved element locus uce-7074"
BASE COUNT          231 a          107 c          117 g          214 t
ORIGIN      
        1 taattcaaaa ggcaaattag aaagcagtag aaatatgcct aaaactctac aaaggaaacc
       61 gtaaaggaga ccgagtatta caggaataat aaaaatacca ctgcgtaaaa agtcagctgc
      121 atggcttcat ctaaaagtgt tctggagaaa atttgctatc aattacacct ctcctctaaa
      181 tacttcataa atgaagcata gggttttaag agacattttc tctttctttt gtcaggtctg
      241 gagtcattaa acagagatta gctggataaa tagaggaagt gatttttaaa ctgtttgcaa
      301 acttaatgtg aagagcccag ccttgcaaat tatcacgtct aatcagagat gcacgcttca
      361 ctgctccagt aattgtacta gtattagtca aattcttgtt gtctcctcat tagccatgaa
      421 aaggagactc aagatgtact tcattagagt atcctgaata taaattttta gtgtaaggag
      481 gaagagatgt gttgcatact gtactgtata tagaaagata ttaagaacat aaaacatatt
      541 gaatcattct gggttttgac tgaatcttta acaacgaagc cttttctctt ttcattttta
      601 ttgtattgat ccttctttta tttgcagtga gaatatagca cttgaaaatg taatttacaa
      661 ccaatgtca
//
LOCUS       KCPA01000698             612 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 76587tic ultra-conserved element locus
            uce-7685, sequence.
ACCESSION   KCPA01000698
VERSION     KCPA01000698.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 612)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 612)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="76587tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>612
                     /note="ultra-conserved element locus uce-7685"
BASE COUNT          220 a          111 c          110 g          171 t
ORIGIN      
        1 gcttacatta cgtatgataa acacagtatc atggaagaaa tgtattaaaa tggatttcaa
       61 aagacagatc aaacgtaacc ctgatatcct ttctttcacc attaaataat tctatagaaa
      121 gttaaataat gcacaaaaca tacagtgatc agccaaatgc tgtctaaccc tatcaaacac
      181 aggtcaatgc catcatagca gccatctgaa atttcctcca ctggagctgc cgaatgcttt
      241 ggaagtacag aaagcctaga attgagacag aattacacta gcattgtgta aataatcaaa
      301 ctgtgacctg tggggttaaa acctataatt ggagtgatac ttcaaagaga tgactatttt
      361 ttcagagcta ttttgttcag ccagatagga agatggcttg ttgggatttt attggccagc
      421 aacaccactg caaaactgat attttcaaca gctgctggta catttgtgct ctgaaaaatt
      481 agaggctaaa ttgaagcatt aaaagacatc aaaggaccga tttaatgcaa aaaacaagta
      541 ctccaactgg atctatttta ctgcaaatta ataatgcaga tttacacaaa atgtgatgca
      601 ctgagtgctt gg
//
LOCUS       KCPA01000699             596 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 76699tic ultra-conserved element locus
            uce-1529, sequence.
ACCESSION   KCPA01000699
VERSION     KCPA01000699.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 596)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 596)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..596
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="76699tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>596
                     /note="ultra-conserved element locus uce-1529"
BASE COUNT          207 a           83 c          122 g          184 t
ORIGIN      
        1 tatgcaagat atataatcaa aatattttta aagtaacttc aactggtttg ggaaagaaag
       61 aggtggctta aaaatacatg ttctgtttca tttggggtgc agtaaaaacc atcgtgtaaa
      121 agttgtaagc ccagaaataa ataaaataaa agcatcagtc atttctatca ctggggaact
      181 tttttcatct aagcacatat gaacaattga tccttgtagt catatatagc agtaaacatt
      241 aataacttaa cagtctgaag tcagtgctga agatatggag cattattgaa agatggagtc
      301 gagcaggtgg cactttaata tgttcagtgt catggttgac tctaaagact agtagaatga
      361 aattacttga ggttctaaag atttaaaaag cgaactcatt ttgctgcact aaggaaatgc
      421 tactgatcag gctttctgtg tccctttttt ctaggctaga aaatattaac cctgaagaaa
      481 atgacatggt aagccattct ctgaggagat ttcttgatgt cagtcttata tcttagaggc
      541 ttaagttcaa ttgagtgggt ttcaagaact aagatgtggg aaaaagaaga attgac
//
LOCUS       KCPA01000700             807 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 76809tic ultra-conserved element locus
            uce-4301, sequence.
ACCESSION   KCPA01000700
VERSION     KCPA01000700.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 807)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 807)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..807
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="76809tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>807
                     /note="ultra-conserved element locus uce-4301"
BASE COUNT          232 a          135 c          167 g          273 t
ORIGIN      
        1 atctcatgct agtaaatgct tgaaactgtc tttgaataaa ccagtcgata gtacctatca
       61 atttcttatt tatatttatg tattgtaata tagatgtaat tttattggaa tttgaaaagc
      121 ttggatgttt ttcacagtct ttggggcaaa caatgaaatt aaattgtata gtgatcttaa
      181 tctattatta aaaggtcctg gaaaggaaga ttacaaggta gattcaggtt ttgaatcagt
      241 tttgccattg gtttagcagc gggtgggcag gcagatgcct gctcagagta gaacctattg
      301 ccatttttca ccattgatag agtagccttt cagagtcaat gagctctgtc aatgtgagct
      361 tgtcaaggct acaacttcat agacctgaga ggcggtttga gaggtcagcc cttttcaggt
      421 ttgctgtgat gcaaatgaac tttaatgctt aaacaactat tggaattttt atgtctgctc
      481 cttgttcttt tttcttcaca aagtcattga cgagacattc agtgcttttt aaattggaag
      541 ttgcattgtg ctaaagacct agtacagatt tacggagggc tgaaagcagt tagatcatgt
      601 tcttttcatg gtgcgattag aatcaaatcg atttccctac agccttcagc attcagatgg
      661 caattttaac aaagcttggg ggctagacaa gggacaaaac gactgaactg aatgttaatt
      721 acactctgca gccttatttt cttttgattt ggagctgact ggcaactaaa ttaacaaaag
      781 tgtgaccata actgctgccc tattttc
//
LOCUS       KCPA01000701             555 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 76917tic ultra-conserved element locus
            uce-2587, sequence.
ACCESSION   KCPA01000701
VERSION     KCPA01000701.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 555)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 555)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="76917tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>555
                     /note="ultra-conserved element locus uce-2587"
BASE COUNT          191 a          108 c          116 g          140 t
ORIGIN      
        1 ttttttcttt gaacttcaat tacgaaggga gacacccctc tctttttgca ttcattcagc
       61 atttgattga agagttaatt cagctccact gaacaatgat agatgtaatg aacataaagg
      121 tcttccaatg tgagagatat tcttctcaat tctttctgac aggcaaggga tggtaaatag
      181 acaaaacaga gtcaagctag gcagcaaact tgtagaaaga atgactctgg taatgtacaa
      241 ggacagcatg cacatcaatg aatacttaca taaatgtctg caccataaaa tccatcctgg
      301 tatacaacac tgcaaggatg cacacacaaa gaaaaacatc catattagtg catttccaca
      361 tgcaaatgcc accaacccct gcacagctga ggttagtctc tcacaagaac agaggggagg
      421 gggaaggaag gcactcttca cattggttaa ggaggttggt agtaattatc agaagtgaac
      481 ctgtaaatac atcatcttat caagtatgcc aaatgcttag tcaaaggaag gcaaagcatg
      541 gcagaagttt ggggg
//
LOCUS       KCPA01000702             662 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 77028tic ultra-conserved element locus
            uce-6625, sequence.
ACCESSION   KCPA01000702
VERSION     KCPA01000702.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 662)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 662)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..662
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="77028tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>662
                     /note="ultra-conserved element locus uce-6625"
BASE COUNT          180 a          118 c          134 g          230 t
ORIGIN      
        1 ttgaagccct gaggctgttg actcagctca tgatatattg tactgttagt gtttcagctc
       61 tctcacaggg gattggtggt cctactttga ggtcaggagt taactacttg tattttagca
      121 gtgtactgat atcaatacgg ctcctatgga aaccttactt gacgtcattt tcagatcttt
      181 gctactgtag ctaagcttta gtaaaagtca ataagaacat tagattgttg tctgtattat
      241 tacttgccac ttcctgccag caatctacca attcattagc agagagtttt ggaaatctca
      301 cttgattatt tatgcagtca atagcaaggc ttgtctgcat tcataattgt ttgattttat
      361 ggcctcttct ttaaacaaac attgtctatg gtaatgcgat gccctgatgg atgggaaagg
      421 ttttgtctgt gaatatcatt tagataatta aaaatgacag atgaaatcgc ctgctgtctt
      481 gacctgtact ttgttccctc agtgatgctg aggagatgct gattgctgtc aatcaaaacc
      541 cattggaggt ttgtaaattc tggctgctgt gaactctgac ctcgagtgtt gatctgaaat
      601 agataataac cttgaaattc tattagaatt taaaaactgt tcaccaaagg ggcatactat
      661 at
//
LOCUS       KCPA01000703             351 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 77132tic ultra-conserved element locus
            uce-6107, sequence.
ACCESSION   KCPA01000703
VERSION     KCPA01000703.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 351)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 351)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="77132tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>351
                     /note="ultra-conserved element locus uce-6107"
BASE COUNT           98 a           74 c           59 g          120 t
ORIGIN      
        1 agcagaaatt agaatttata ttacacggtg ctcttagcat ttataaatgc tcactcctgc
       61 aagttaaaaa tcctgggccg taattcccac tctgccaggc acttttcaat catttctctc
      121 tgctaatttt ggtgtcaccc tcatttcttc attttgagca aatttgtaaa tggccctgat
      181 gtgttctaca atttagtcaa ttactgtttc agcctgcaaa cctcctggga aacggaacat
      241 acatggcctc aaggtacgaa tttcaataat tgtttcagga aagttagatg gatttgtaat
      301 gctgtgttcc acttattgaa atgtcaaata aaactgcact ttcttgagct c
//
LOCUS       KCPA01000704             455 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 77240tic ultra-conserved element locus
            uce-2409, sequence.
ACCESSION   KCPA01000704
VERSION     KCPA01000704.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 455)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 455)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="77240tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>455
                     /note="ultra-conserved element locus uce-2409"
BASE COUNT          122 a          109 c           85 g          139 t
ORIGIN      
        1 ggtacacgga tggcacctct cactgctcgg ggctctgctt tcattaagaa cattttctgc
       61 ctgttctcca agggcaccct ctgtcagaga ctgccacgca attatggctt tgaagtccag
      121 tgaatagaaa caaaatgaat tagcgttcag gtgttcatgc aacctgatta caaaggccca
      181 attcagtggc gtccttcaca ccttttcact tgtccctgca taatctctac acaccccttc
      241 ctccctgtta tccctttatt tcctaatgct tgcaggtcct ccaggaagac acaagcactt
      301 acagttgttg agtgattaaa tatttataat cagggcaatg agtgaggtgt tgaataataa
      361 atgctaaggt tgaggcggcc ttagataatt tctgcagatt tcttcatcca cagcctcttt
      421 gattctaagg caaaattctt ttaattaaaa ataac
//
LOCUS       KCPA01000705             486 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 77351tic ultra-conserved element locus
            uce-3627, sequence.
ACCESSION   KCPA01000705
VERSION     KCPA01000705.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 486)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 486)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="77351tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>486
                     /note="ultra-conserved element locus uce-3627"
BASE COUNT          119 a          121 c          113 g          133 t
ORIGIN      
        1 aaggcaggaa gtactgttga aaaagtcacc ctgcatgccc cgtgccagaa gtgtttctct
       61 taccctgcaa aacatcccct cagctgtggg gtgcgcaggt ggtttcccac tgcagggaag
      121 gggctctgat gccagcacac cttgtgccgg tataaaacta tctaagccaa agttcaggtg
      181 aagggcagcc atgtagctag aaagtcatgt ggctctcatg ttggttagta tgtcactttg
      241 aacagctctt atctgatatt attatgacta acccagtgct gacagcatgg aacagattac
      301 agaagccatg tgatgattat ttaaggcatt gctgagtcta gcatgcagct aatattaacc
      361 ccttctttcc agagcagctc tctcaccctg tgagctggga gcgctccctc gccacgctta
      421 ctctacttca gacaaggcta tttttgagtc attcctctgt ttcaatgtgg ccttacagtt
      481 cagagc
//
LOCUS       KCPA01000706             638 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 77458tic ultra-conserved element locus
            uce-7722, sequence.
ACCESSION   KCPA01000706
VERSION     KCPA01000706.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 638)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 638)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..638
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="77458tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>638
                     /note="ultra-conserved element locus uce-7722"
BASE COUNT          179 a          120 c          172 g          167 t
ORIGIN      
        1 cttagtatcc aactcccttc cccgctaccc taccctggtt aataatgaaa ggctatttta
       61 agggactgga gttcagtaac acatatccag aaaaacgtgg actgtttaac ctaagcacag
      121 ttcctgggca atggctctgc aaaaggcatt gctcagagtt aggaagttgc tattgcaggg
      181 cagggaggac aggggggtgg gaccaacagg tcctcagatg gggagagctc tgaatcataa
      241 acacaccata gctttaataa aataaatgaa gtggagcctt ttcagacgag ggcagactgt
      301 attggggcaa gccaggcttt taacgttagg agtgaaaatt gacaggctga gaactgggac
      361 ataaacaaaa atgtcaggcc ctgggagtct tgttcactgg acaatgtctc aattgtttca
      421 gtgatttttc gcaggcagca ggggatagtg ggagatttaa ctcgttactg gccatgtagg
      481 agctggaggt gctcacagag tgaagaagtg gcagaaaaga gcagtttgga aatgattaag
      541 ctggaaaggt cacactgttc tctgcatact tgtctgctgt taaagttggg ctttacactt
      601 gcttagtttt gctccttgct tggtttttat caggaaac
//
LOCUS       KCPA01000707             630 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 77569tic ultra-conserved element locus
            uce-2298, sequence.
ACCESSION   KCPA01000707
VERSION     KCPA01000707.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 630)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 630)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..630
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="77569tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>630
                     /note="ultra-conserved element locus uce-2298"
BASE COUNT          203 a          103 c          108 g          216 t
ORIGIN      
        1 aacattgtat ggatttgact gagctttaaa caaataatga ggaactgcat gttaaacttt
       61 ctacaatgtc atgaattata atactgaatc cagtgtcatt aaattgtatt tgtttcttgt
      121 cagctacaac aattttagca aagcacaatc cgtatgaaag tatgaataaa attcagggag
      181 tagcatcaag gacttctgag ctcaggaaac tgagtttggc agtgctaatt tgtattaaag
      241 ttgttgttgc atgacagcag gaaaaagatt taatgcttgc cacctgaatc aagccatgga
      301 acattggttt ctataactgc catgaatttg aatcaaggcc aatatctcta aatttgaaat
      361 aaactgatac tctgtcttga aagaagatac aggccactta tgttgcagaa ggtatttaga
      421 aaatgtattt caatttaatt ttcagcagta tatatctttc aaatttttag gcactttagc
      481 actggctttt tctgtattcc agcaaatatg tagcctttca gccatttatt tgtcaatatc
      541 cagtttgaaa ccacgagacc acagatgctg gttttactta ctatgcagct gcttacctta
      601 atctgaaagt catttttctt ttgtatataa
//
LOCUS       KCPA01000708             834 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 77682tic ultra-conserved element locus
            uce-1260, sequence.
ACCESSION   KCPA01000708
VERSION     KCPA01000708.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 834)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 834)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..834
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="77682tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>834
                     /note="ultra-conserved element locus uce-1260"
BASE COUNT          159 a          251 c          182 g          242 t
ORIGIN      
        1 atcgccccag ccccctgagt tctttgtctg tgtggcagag ctctcccacc cctcagttcc
       61 tttatcagac ttcccctcgg gccgtggcat ctcctcaata tcccacacgg tatcttgctt
      121 aatttgagtc tggccccagc cggtgtttga aagcactcgg gggtccaagt cagtcctgct
      181 cagcaaagtc tgcaggactg cctggcaatc gggatgcgta ggcctgtatg atcggcgtcc
      241 agaattgtga ctgtcactgc ttcctgcttt gtggttgctt ccagtgcttt gacctccgac
      301 ctcacttcct gcagagctgg aagatcttcc ccaacaggga gcctgggaac tgccttggtt
      361 ttcaggaaga gggtggcctt tttgattgtc ccatgctcca gtgctagaat ttggttggtt
      421 tggaccactc cactctccaa tcttcagttc atcagaccca gacagctgtt tccattctcc
      481 ctgagagacc ccagatgtta atttgttccc ttcaccccat ttgctttcat ttgcatgctg
      541 agggccaaag ttccaagacc caccacccgt agaccggtta ttgttatccc aagaatcact
      601 tcttgaccca ttaggttttt gaacagaagc tcctttccag gagtcctctc tatcctttcc
      661 attgttccca tggtttccag aattgctctg cccagagact gtgtcagttc cagaagaccc
      721 cctagctgta ctccaagatc caacactccc agtctttctt tctccagtgc tttgagaagg
      781 ggtgtcagtg ctcctggaag ggttccccaa gcccatttca aagggcattc cctt
//
LOCUS       KCPA01000709             449 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 77789tic ultra-conserved element locus
            uce-6779, sequence.
ACCESSION   KCPA01000709
VERSION     KCPA01000709.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 449)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 449)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="77789tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>449
                     /note="ultra-conserved element locus uce-6779"
BASE COUNT          127 a           89 c           97 g          136 t
ORIGIN      
        1 cagctttctg ttttgtgctt tcttagccga tgccttgaaa gctagatacc ccagccatca
       61 attgccgaga cattttgtct tttgtgacat tgaggaaaag acaaggaaag aactaaaaaa
      121 tgtcaaaaga tcaaaatcaa tgggctgaag gaatgtgatc tgtttatcgg ggtgtagctg
      181 ctctttctgt ttgcattaag tccgagtgag tgtctttggt caccactaaa cttgctttta
      241 ttcactccct aggagatgta atacaagcat gaaacggtgg ctcacaaagc aggcacagcg
      301 gcaaataaat aaaagggctt ctttaaagac cacaaaacca ggtttactgc cttctcgtat
      361 taaacatgct tacctttctc ttgaaacttg ttgctgagca cagcaaatgg accatgttgt
      421 gttgacacgg gtgtcttgtt tctgtgtta
//
LOCUS       KCPA01000710             567 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 77895tic ultra-conserved element locus
            uce-2909, sequence.
ACCESSION   KCPA01000710
VERSION     KCPA01000710.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 567)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 567)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="77895tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>567
                     /note="ultra-conserved element locus uce-2909"
BASE COUNT          191 a          121 c           90 g          165 t
ORIGIN      
        1 tatgacatta tctcacaaaa ctaagacatg atagtgaaaa aggcaactca cagtacagat
       61 ctattgcaca gcatgcaaat aataacgtac cttatctggc caccactgca agtcttctcc
      121 taaagaaaca ggactttgaa caggtgtgtt cttcttgtcc aggtttggtt ccccttcctt
      181 acttgttgag cctctttcat tatcaaatga ggctccatca agccaccttc gttcacgcaa
      241 acgtaaaacg gactcacgtt cacgcaacag ctcagagtct ctctctaagg gaagaaggag
      301 aactggtatg caattgggtc acaccagtgg gataaaagta agccactctc tagtaaagac
      361 ccttcaggat gcaactaaca gtagttaatc tactcataca gattaaaaat atagtcctga
      421 catgcaacat tcaatatatt aactctttca agaatatgta ctttagaatt actaaacata
      481 aaataagcta gaaatagttt tgtgcactat tttcatttac atcataagag gccaaatatt
      541 taacatttct atttagtttt atcaatg
//
LOCUS       KCPA01000711             566 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 78005tic ultra-conserved element locus
            uce-3911, sequence.
ACCESSION   KCPA01000711
VERSION     KCPA01000711.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 566)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 566)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..566
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="78005tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>566
                     /note="ultra-conserved element locus uce-3911"
BASE COUNT          203 a           92 c           99 g          172 t
ORIGIN      
        1 agagaaagtg gcatataggg ggttaatgga atgatgaagc aaaaaattgc agtgccagca
       61 gaattcccca aagggtaaac aaaactctta acagttgcaa acaataaatt gtcaatacct
      121 tgtagaaagg gtggataatg aaaagttata atgcctatag ttagtaccct ctttaaaaga
      181 atttacacag gatatgaaat taaattctgt gcacagttct cttaatttgc ccttaattaa
      241 acaatactcc ataaatggtg cattcagtga ccaaatgttc agagacagca aaatggtggg
      301 tcccaagcca ttaggaatga aataaagtca gtcccctgag agcctgctag aatctggtct
      361 atctaagtga caactgatgg tttaggaaag ataattaact ttgcaattac aaactgcagc
      421 tttcaccaat gctgtttctt tcagtattct cttataaatg ttctacagca agataaaatt
      481 ttttttaaat gctgagttca taggggccca tttttcctac acaaatataa tttgaataat
      541 ttattttaaa tatttcagat cattaa
//
LOCUS       KCPA01000712             631 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 78111tic ultra-conserved element locus
            uce-831, sequence.
ACCESSION   KCPA01000712
VERSION     KCPA01000712.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 631)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 631)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="78111tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>631
                     /note="ultra-conserved element locus uce-831"
BASE COUNT          183 a          132 c          126 g          190 t
ORIGIN      
        1 aatgattact gtggggcagt tcctacaagg aatattgaat tcattagact ataattgaaa
       61 tatccagttc acaaaacata ctgtttcaca tggaattcca gaaacttttg taagctggca
      121 aatcagacag agagaaacaa acaaacaaga aacaaaccca accttgaatc cagagacatt
      181 ttttctcccc ttcatgaagt gacaaaaaaa tcccttcatt atgacctact tgtctagaaa
      241 cggactttca accccatggt taggctaaga tttgctctac tttctcccta gggcataatt
      301 gtcagactga cttaccgtgt gccttttagc ctttgttctg cctctcacgc tgacatcagg
      361 gaagcagtga tgtagaataa agcaggggtg ggctaggtta gtccactgtt tgtgtcgttg
      421 tgtggtgtgc agggacactc tgtgatactc tagtgagctg ctaagctttt tttgtaggct
      481 ttgtgtcatt tacttaacga ccaatctcat tagctgccag ggtacaatgg gctgatgcat
      541 tttctatgta catactctac acagtgaccc tcaaggttgc cgaaggtcta tttaatcagt
      601 caaaatgctg aatatatttg cagtaaatca c
//
LOCUS       KCPA01000713             835 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 78221tic ultra-conserved element locus
            uce-3096, sequence.
ACCESSION   KCPA01000713
VERSION     KCPA01000713.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 835)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 835)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..835
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="78221tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>835
                     /note="ultra-conserved element locus uce-3096"
BASE COUNT          223 a          153 c          164 g          295 t
ORIGIN      
        1 agctcggatg aagcaaatgg aattatttaa acctacagga cctccagttc ttaaatatgt
       61 ggaagcagtt catcttttgt catgctgctg tgaaaacctt cccaggacac agagttactt
      121 ttcaaaatgc ttcatgttta ttttgtttaa ctgtacgtac tctccaggtg ctacgtttaa
      181 ctcctctttt tcttctttag atctctgcag cgattatatt tggaaaaact gtatatctga
      241 acacttaaat gtgtgtgagt gcaagcagtt ttacgttcag attttctctt cctgtttaga
      301 taacaaatct cactttcctt gtgtgcttgc actataggtt tgggactgac aatagctgac
      361 taacatgtcc tgagctgtga gagggcatag caagaaggcc ttcatgcggt aatgaccctt
      421 ttcagagaca atggtcatca tggattatgc gtttccaatt atttgttcat ttatttattt
      481 ttttacatat ttctaaatta gaaacctcac tgcttcatgg cagttggttt gctattgctt
      541 ccaattctgt taggatgcca ttttgtacta gaggtttttc tatgatcatt tttagatagg
      601 caatgatgtc gttcataaat gatttaggcc acagggttgg gtatgatggt acacagttgt
      661 acatccacaa aatggagtat taaatgtagt ttcagaggac ttctcaactt tgtggcattt
      721 aaatacaatg caagatcata ctgtataacc agactgtgta aggggatttt gcattaacat
      781 cgacagtccc ttaccatcca gatggctgca ggattagtat gtgcctgcat gcata
//
LOCUS       KCPA01000714             397 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 78327tic ultra-conserved element locus
            uce-2777, sequence.
ACCESSION   KCPA01000714
VERSION     KCPA01000714.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 397)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 397)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="78327tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>397
                     /note="ultra-conserved element locus uce-2777"
BASE COUNT          135 a           71 c           75 g          116 t
ORIGIN      
        1 ccttcccttt atcttcatga actgtgtcct ggtgggctga aaattttaac cacttttcac
       61 atttctagat gaaccctttc ttcaatcaaa gatgatgaag tgaaatgaaa ttatgaaagc
      121 cagaaaacat agagcctaaa gtgtgaccta ggaatcttaa ttttcctcaa tcatttctgt
      181 aacggaatgc aagtctgcag cagcgggggg gaaattatag tacaaattac catgctatgc
      241 cagataaatt attctctgca gcacggttat taagtgatag ataaataact aacactgcag
      301 gactgattga caaaatataa gtgacctgga gctaagcagg gcactgtgaa aataacattg
      361 cagtgccact aatattttaa tactgaaatg agatttt
//
LOCUS       KCPA01000715             577 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 78426tic ultra-conserved element locus
            uce-2034, sequence.
ACCESSION   KCPA01000715
VERSION     KCPA01000715.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 577)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 577)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="78426tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>577
                     /note="ultra-conserved element locus uce-2034"
BASE COUNT          196 a           96 c           99 g          186 t
ORIGIN      
        1 taattaataa ggtataatat gcaaagcaca gtaatttcaa acagcttgta atgtctctaa
       61 tgtactttca attttttatt ttacataagg gctatattca ttatgtggtt atgataaaca
      121 tactaatgaa ttttattaca ggaacaaatt taaacatgta aatgagatca aatagtatta
      181 aaatgcaaac gatggggaaa cttattacaa actaaccttg ccaacataca tggagggatg
      241 ttacaaaggg actcgggaag ttgcacactt ggtacaaagt cagtgcagtc ctttcacaat
      301 gtcactgaac acaagaatct gtgaactctc cataaactct gttgaacaaa aaaagttaac
      361 tcgaatcctg agcttgcacg taactttggg tgacaattaa aatccctttt cttgttccag
      421 tgaacagtaa tctgtgcata attacattca aatgagatat tagcattttt tgtgcttact
      481 ctttgttaat tgcagagttc actcaccatg gtgatgcttt tgatagaatc aagcaacctt
      541 attgacctga tgctgcaagg catgtttgga aattctg
//
LOCUS       KCPA01000716             449 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 78527tic ultra-conserved element locus
            uce-7648, sequence.
ACCESSION   KCPA01000716
VERSION     KCPA01000716.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 449)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 449)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="78527tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>449
                     /note="ultra-conserved element locus uce-7648"
BASE COUNT          144 a           79 c           74 g          152 t
ORIGIN      
        1 aataataata ataaatgtta atcaaaaaac tgcatgtgtc tttctgattg tgccagtgtt
       61 gtggtattca attatgcaat tttcattggc atattaatca tcttttcaac aaacaagcca
      121 gcgttaatta aagcaaacca tggataaaga catgttgccg gatcatcatt ccgtttatca
      181 cagcgcacag gctggccgtt aagtaaattc tggactgtga gatgaatttc aatgttggct
      241 tcatcttttt tgttggagtt tgaatgcaac tcatctacaa caacaacaaa cttcaggctt
      301 cacaagagaa agatgaattt atttgtaatt aatggtaaaa gaagaaagat aaagtagttg
      361 tatgcttcta atgggaatta gagtatttca aactaaacca tttttgttct ttcttcctct
      421 gttccccttc ttatcctact cagaaccct
//
LOCUS       KCPA01000717             700 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 78635tic ultra-conserved element locus
            uce-5820, sequence.
ACCESSION   KCPA01000717
VERSION     KCPA01000717.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 700)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 700)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..700
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="78635tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>700
                     /note="ultra-conserved element locus uce-5820"
BASE COUNT          209 a          123 c          144 g          224 t
ORIGIN      
        1 ttatgccttc ttgtttataa tctgagccat aatgaattcc accctgccta ttgtagagta
       61 ctgtaagagc agccactgta aaacaagctg tcggcatcca gaatgcagtt tctcacccag
      121 aacaatgtaa taagaaaaat aattagattc tgtgattaac agaacacagt gaaattatat
      181 acggtggttt tgattgcaga tgttagcact ttacaaattt gcattggaat cttatttcag
      241 ccactaagac tgactttcaa gcaacagtaa gcaggctata gttaaccact gaagcagaaa
      301 tttagagtcg atgagtaatt attaagagct ttccagaata ttagctgttt cagttgctgt
      361 agtgatggaa tagtccatta gatatttctg tttctggcaa ctcctgagaa ttgattctga
      421 tacgaaacga cgagccattt tgatcaatac tgtaattact cttattgatg gattgtttta
      481 cagtgatagt catcattgca atgtgtctgc tcaggaggca tcaggattgc tgcatgcagt
      541 aatgctccac aaatatcgga ttcaaatcaa cacactatag agactgggct gacaagcgtg
      601 aaattaattg ttccacttca tgtaagacct gcattcttct tttgagagag taatttgttg
      661 ctgtgtgtag cctgggaact ttggtgccat gttaggtgtg
//
LOCUS       KCPA01000718             503 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 78743tic ultra-conserved element locus
            uce-7248, sequence.
ACCESSION   KCPA01000718
VERSION     KCPA01000718.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 503)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 503)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="78743tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>503
                     /note="ultra-conserved element locus uce-7248"
BASE COUNT          177 a           84 c           91 g          151 t
ORIGIN      
        1 ttggtttgca agcagcatct tttactctta atggaataaa gatcacagtt tctacagaaa
       61 ataatgatag aatttagtca ggatgtcagg aatgaagacc acatggttat tgtgagttta
      121 acctttctct tatggctgat gaaggccaat gcagtatttt attatcaaca ttggcaggtg
      181 atttattacc actgtttcta ctccagtaaa accacattaa gctgtgcttg atgtaccatt
      241 tgttatcttc aaactcccta tacactttct gaatgcataa tctcttcttc taagatgctt
      301 caacagaaaa tggtaaatat ttaagtcatg attccaaatt catcaaaagc ttaggaactg
      361 aaatacagta ggtgaaagac tagatgccaa cataaagcga gtgatgtaat gcatctgaaa
      421 cagcagccat gcataataat gcattaaggt agattcaaga gtgacagaaa gtaaatcatt
      481 aagagacttc aaaggagaac aga
//
LOCUS       KCPA01000719             622 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 78852tic ultra-conserved element locus
            uce-7975, sequence.
ACCESSION   KCPA01000719
VERSION     KCPA01000719.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 622)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 622)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="78852tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>622
                     /note="ultra-conserved element locus uce-7975"
BASE COUNT          159 a          144 c          163 g          156 t
ORIGIN      
        1 gcagtgtcta ggacagatgt gctacctgta gaagtcttta gctgtgaacc cttaatttgc
       61 agctggaact ctaataaaca gtgcatagtg tttcaatagc cttctgctta tatgtttgaa
      121 gattcgaaac tgaatggtga ggtggccaag gcggcgctgg caaacgaaga ctgtccccac
      181 atagaccagg ctattacgcc tgatgagggc ctgcccttta cccgctctgg cactcgggag
      241 agatatggac cctgcttcct cttatcaacc ggggaatatc cctgcccgcc tgatggagga
      301 ataagaaagg gtatgtgggg ccctgtaacc acgtagctag caaccggttt aagtaactga
      361 gagaaagtca gcttagctgt agcacgcgat agtgcgcttg ctgtagagat gcacgtttgg
      421 gctggaaacc accacctgat gtctgcattt ggagtttcta acctatttct ttcagaaaga
      481 aaagcctgag gagctgtgct aggcagtgcc accccagctg gtgcaggcag ctttagtgga
      541 ggatgctcta ctatatcctt aaattagccc atccccgaag gagagaccaa ttaatgtatc
      601 gtagcaatga aggtttgcca ct
//
LOCUS       KCPA01000720             519 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 78957tic ultra-conserved element locus
            uce-3421, sequence.
ACCESSION   KCPA01000720
VERSION     KCPA01000720.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 519)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 519)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="78957tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>519
                     /note="ultra-conserved element locus uce-3421"
BASE COUNT          120 a          130 c          109 g          160 t
ORIGIN      
        1 cctgctcagc tcccaacctg accgctgagc tccacacaca catggccttt cccaacaagc
       61 agcagtcacc tgtgcttcca gggattttaa tgaattggcc tcttttctcc aatccactta
      121 tttgcctgct gcagcctccc tctgccggtc tcctccctcc ccactcccat cctggctgct
      181 cccaggcaga gggggagagg aattatttat tgtgtgcctg ttgaaaatga aaggctttta
      241 cattttaatg agcactaaat aggagcgagg aaatattgtt cattagctgt aatctgtgga
      301 attgcttgag tgaacttcct ttggaggccg ctttaaacgg ttcactcaag taaagcagtt
      361 tgtatggtaa ttaagggagc atttttctgt caacatctgt gctgctattt ataacgccga
      421 aggtatctta ttgctccacc agagaaacat taaaagaggt gggcagaggg gaggttgtat
      481 tttttttctc tcttcaaaac ccctcccttt tccttgttt
//
LOCUS       KCPA01000721             411 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 79058tic ultra-conserved element locus
            uce-1759, sequence.
ACCESSION   KCPA01000721
VERSION     KCPA01000721.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 411)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 411)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="79058tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>411
                     /note="ultra-conserved element locus uce-1759"
BASE COUNT          163 a           57 c           70 g          121 t
ORIGIN      
        1 aagggtaaag ataaaaacaa ttccaagctg agagaaatgc aaataggtgg aaagcagtga
       61 cattaatagg aataagatta ttaattgctg ggcatatttc aggagaaatt tctgaaatgt
      121 atcaggttac acaatgaaac aggctggaaa agcataaaat gacaataatt gaaatgttct
      181 ctttgaaacc ttccattaaa aaggatcaca gcttattgct tttaatatct gtcagaaaga
      241 cattaaaggt gttttatgac atctatgcca acatttatat tatctccatg ataatgatct
      301 ctacacaaaa tgtataatac atttacaaaa attacattat acaaattaaa tgaaaccacc
      361 ttttactgat tgctaaatgt ctccaagggg tttgggaaag acgtgattag a
//
LOCUS       KCPA01000722             695 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 79163tic ultra-conserved element locus
            uce-7588, sequence.
ACCESSION   KCPA01000722
VERSION     KCPA01000722.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 695)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 695)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..695
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="79163tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>695
                     /note="ultra-conserved element locus uce-7588"
BASE COUNT          207 a          108 c          159 g          221 t
ORIGIN      
        1 attcttttca gtttgagaga gtatgtatat ttaacaaaag agcaccaagc agcagaaagc
       61 tgaatcagag aatcttttat cataataatt tcaagatgag aagtgagaaa atgggaattt
      121 tgagacggga ttgctagcag tgaaagtgta gatcagtaag gcaggaattt accagcttag
      181 ggagacagaa tgtcatgttg gaagtcaaca tattcacgtt acagtcttta atgttgaaaa
      241 tatagaattg agaagtgttt cttaatgact gaagctcttt atgtggtact gtttgctagg
      301 tttcggtggt tgcatgaagg atgttaaatt tacacgaggt gctgtcgtta acttggcatc
      361 tgtgtccagc agtgctgtca gagtcaatct ggacggatgc ctatcaactg acagtgctgt
      421 taactgcagg ggaaatgact ccatccttgt gtaccgaggg aaagagcaga gtgtttatga
      481 gagtgctcta caaccattta caggtagcgc atcggttcct tatatcattt tcattccgtt
      541 ctttaatctt ttatctcctc ttctttgaag aatacctcta tagggtggtt gcattaaatg
      601 aaggaggatc agtatctagt gcatggactc acgttcgaac aagagaatca ggtaaatata
      661 attttaaagt ttactcgttc ttatttttca taaac
//
LOCUS       KCPA01000723             579 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 79267tic ultra-conserved element locus
            uce-1695, sequence.
ACCESSION   KCPA01000723
VERSION     KCPA01000723.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 579)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 579)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="79267tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>579
                     /note="ultra-conserved element locus uce-1695"
BASE COUNT          187 a          113 c          113 g          166 t
ORIGIN      
        1 tttgactgtt gcaaaataat ccccactctg cttctttcta tgaactgtaa tacaaggtcc
       61 aatagacagc ctcagatgca tctcaggtcc agtacatgct tttcaaactt aatcaaggga
      121 atatagaaat gtatatgaaa agatgaaagt gtctttgcct ttatacatac tgaaaaaaag
      181 tgagatcttt cataggggaa ggttaagtct gatgctaatg cttatttaaa atggtgacag
      241 tctgaagtag tgaagccttg ccgggctgct ttaatttctc cctggaatag ctctctccca
      301 accttcggca gcacatcaaa gtctctggag ctcaattaaa attggattat attgaaatgc
      361 tctatctatg gaactgtgtg ctcactaaca cttttctttc agtaatactc cagatgacag
      421 ttgcccatcc caatttaaac agttgtcata gagaccatga actaaagcag cagtaactaa
      481 caatacaaag gaaaggtaag tggtaggatt tctatgaatg aagggcttgg tttgcagccg
      541 cagtgctcac actgcaagaa gctaaatgca gaaaacata
//
LOCUS       KCPA01000724             512 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 79373tic ultra-conserved element locus
            uce-5054, sequence.
ACCESSION   KCPA01000724
VERSION     KCPA01000724.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 512)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 512)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="79373tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>512
                     /note="ultra-conserved element locus uce-5054"
BASE COUNT          147 a           99 c           96 g          170 t
ORIGIN      
        1 ttactgattg tttacaaacc ttgtgcttta cggcaatgag ggggtaacat accttcattg
       61 tttataaaat gacagctcct aatggaccat attagcttta acacaaacta ttaaatcctt
      121 ttcattaaat tattctgcac tctattttgg aatcttgtta gccttgggaa gtaggtgcaa
      181 actcctaagg aaacatgagc acacattgag actattatag ataatgttta ttaaataagc
      241 ctctgaggat gtttttcttg ggttgctctc aagcattttg aaggagtcgt gttccatgtt
      301 tgaggtccca tgtttcttcc tcttaaacta tgagcagctg tagcacatga cctacttctg
      361 tagaaccctg taatgatttc cttccttcag tggcttcagg agtccctctt ctgccctgtg
      421 aaaaaaaggg acaaatattt taatccaagc aaaatgctaa agcaggtttt gttggtttca
      481 gggaagaaac tcaatacagc tacatcactg ag
//
LOCUS       KCPA01000725             431 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 79481tic ultra-conserved element locus
            uce-2502, sequence.
ACCESSION   KCPA01000725
VERSION     KCPA01000725.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 431)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 431)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="79481tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>431
                     /note="ultra-conserved element locus uce-2502"
BASE COUNT          113 a           78 c           88 g          152 t
ORIGIN      
        1 gggtatacaa gcagtattta atcacttact gaattgagaa aagttgttgc ggtttatttg
       61 gagatgtctt acactttgct gaagtctcca gagcttgctg acattcctga ctctttgtga
      121 atgagttatt ttcccttcat ttgtttagct ctttacttaa ttgattttct gtgctaatac
      181 actaaaggtc tgaggaaggc agagcctcag gtgtgacaga tgaaataagg tgcttttagt
      241 cattgctttt atcttccatg tctaatgtgt tggttacatc tgtgcagttt aacagcaaaa
      301 tcaatacatc atttactgcc agtatctgaa agaatttgga agcctgttgg tgctttaact
      361 attaggttcc cactgaaagg ccttcttatc ctgctgctcc tgaagtcaaa tgttgcagga
      421 aaacaagatc c
//
LOCUS       KCPA01000726             458 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 79581tic ultra-conserved element locus
            uce-1056, sequence.
ACCESSION   KCPA01000726
VERSION     KCPA01000726.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 458)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 458)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..458
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="79581tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>458
                     /note="ultra-conserved element locus uce-1056"
BASE COUNT          171 a           79 c           56 g          152 t
ORIGIN      
        1 aaaataatta aaggaatcat ttttatcctg gcataattag ctaatccact ttacaagcac
       61 ttattaaaat gaatttacat gttatattcc ataggtagtt acacagtagt gtttatacag
      121 gaaaaatata atgaaccaaa ctctatgtat ccagctctcc acaattaaaa cgaagactcc
      181 ccaagtaata tcaatctagg agagactaat taagtttggt ttgataacca ttcatttctt
      241 ccattgcctc tgagcaaatt gtttattaga gaaagttatt ttacacaaat caaatcaaac
      301 tgggtaaacc attatatttg agagaaacct tagccatcag tcaattaatc catcattttc
      361 tccagacact tttgtttaac gagaagatca tattatcaac aatttagata tcctatgatt
      421 caattatgac agaaaattta ttgacagctt ctataata
//
LOCUS       KCPA01000727             505 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 79688tic ultra-conserved element locus
            uce-1174, sequence.
ACCESSION   KCPA01000727
VERSION     KCPA01000727.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 505)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 505)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="79688tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>505
                     /note="ultra-conserved element locus uce-1174"
BASE COUNT          150 a           91 c           86 g          178 t
ORIGIN      
        1 acactatatc acccgaccct tgttgttctg cgaccctaat taatattata ctcgctgaca
       61 tttatgtatc agagcaataa gctaaacagg aaacaattta tgtcacctaa agccttttaa
      121 caaatcgatg caactatttg taattgcttg tttcacaaga ttaaaagtac tcagccttga
      181 tcttcgccca cagttttgtg gccaacatga cctgtgcttc cgttgtaaaa taggagtgtt
      241 ggtgatcagc acctatttcc atcaagtaat ccatattgct aatatttctg gaattttaat
      301 gtagttacaa tttatagccg atcaaatgtg gttacctaaa ttgctgttgg tagtagacag
      361 tttaactgtc tttattaatt acagtataat ttaatgtttg agtacaggca cttgtgttgg
      421 tcatttttac agccaaagca gttatgtgcc ttatgacgaa ccattttagc attttcaatg
      481 gaaatttgct aatatgatga gtgat
//
LOCUS       KCPA01000728             659 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 79799tic ultra-conserved element locus
            uce-678, sequence.
ACCESSION   KCPA01000728
VERSION     KCPA01000728.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 659)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 659)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..659
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="79799tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>659
                     /note="ultra-conserved element locus uce-678"
BASE COUNT          191 a          122 c          135 g          211 t
ORIGIN      
        1 aatgtttgca aattttcctg actacttgat tagaaaatgc accaagtaca ggcaccagtc
       61 gagtatgcat tatttaagtg gttggtgtct ggtgacagtc tggaagctgg attcattgtg
      121 gttgcctcta ggaaaatagc actttctggg agaaattctt tcacctttgt gtgcccacag
      181 cacagatctc tcctcatggc agctctagaa ctttgtgacc tggaaaatgt gggacaactg
      241 acacaaggtg accccctgaa tgctggggta ggcccaatta atttaaaatt ttgcttggcc
      301 ttgtctcttc caattttcta aatcctctgg aaaaatgatt aatgcgtaca ctgccaaagc
      361 gaaaatattt ttgaccctat taaagtcgac caagggtaaa ccaagtgtag gctggcattg
      421 tatcaaacta gctttattaa atttgatttg aggtttgtat gaggaaggga cagacaagga
      481 cattattttg cacagcaact ctctttaaaa atactgtgag gaatacaaag tatgtacttt
      541 gggcatttaa ccgagcagaa ttctacctta gtatttcctc agtaggaaaa catattgctg
      601 gtaaagtata tgataattgt ttcccttgat tcagaccttt ccttattttc agattttta
//
LOCUS       KCPA01000729             399 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 79908tic ultra-conserved element locus
            uce-3970, sequence.
ACCESSION   KCPA01000729
VERSION     KCPA01000729.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 399)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 399)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="79908tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>399
                     /note="ultra-conserved element locus uce-3970"
BASE COUNT          125 a           83 c           84 g          107 t
ORIGIN      
        1 taactgagca gtgtagtgtc tgcatcatgt cctctctccc aagtccaggt gactctaatc
       61 ttagctttgc actgtgttcc agatgcggca ggccagaagg ctgtcgaatc cttgtataca
      121 gaggtataca tcaagaactg gtgaatgcag cacgtatgtg ggctctcatg ggccttctta
      181 acagagggct aggactagac actaattcgc actataaaac ataatgctac cttactgaaa
      241 actaactcat caataatata caggtttgca ctgagaatga ttggaaagct aaacataagt
      301 gatgtaggaa agtacctaat ttgcatgaga gttcatactt tacatttctt ttgaaactgc
      361 gcaaaagcaa gaattgaagc tgcccacaag ctaatacag
//
LOCUS       KCPA01000730             393 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 80015tic ultra-conserved element locus
            uce-3683, sequence.
ACCESSION   KCPA01000730
VERSION     KCPA01000730.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 393)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 393)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="80015tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>393
                     /note="ultra-conserved element locus uce-3683"
BASE COUNT          133 a           69 c           67 g          124 t
ORIGIN      
        1 cagcaacagc cttcaaaaca ggagctagct ttttttgcag ttgtgaagta ttggatccaa
       61 ttactgcaaa aaaacagttc attttaatag gatttgtagt aaaacaaggc atataaaaat
      121 cagatgcata ggcaaagaat ttttcatctt taatcattaa gctaccagta caaattgagc
      181 cctgcagtta tttcattccc gaaggagagc agagatttaa agaattcaga ggattaaata
      241 tttgtgtttg agtgaacatg ctaagtgttt ttgtggctgc tatcattaaa atgtatttca
      301 acactatttc aaatgcatac agtacacatt gtctctaaat gatagcttga aactctcggt
      361 cacctgtgta atatcaccat ccttcccaca gat
//
LOCUS       KCPA01000731             597 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 80124tic ultra-conserved element locus
            uce-3242, sequence.
ACCESSION   KCPA01000731
VERSION     KCPA01000731.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 597)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 597)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..597
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="80124tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>597
                     /note="ultra-conserved element locus uce-3242"
BASE COUNT          174 a          109 c          101 g          213 t
ORIGIN      
        1 tgcagcatgg atttcctttg ttctatacag taactcttgt atgttcatag ctgttgtaca
       61 aatattttta ataaaattac tccttctccg tcagagttgc taaattctct atatagctta
      121 atcacttcag tgcatcatta tacatatttt tctatccgtg gcttgcttac aagtatttgt
      181 cctagttgtt ttctactctt tttccttcac ctgtcctgaa tattgccatg aatgtttcta
      241 atttagagcc agaggagtca gtggctgatt agaagacagg aaattagagg attaaactgt
      301 ctggttgaac ttcctttact tatcagtact gtgtaactca cactggatta caaactcatt
      361 gagacaattt ctacagtgta tcagtacttc tgttttcttt tttcctggag aaagtactgg
      421 ggaaaatggg caatttgcag ctacaaccca atacttttta ataacaccga ggcactggaa
      481 gattaaattt gcacaaatgt cttcaagtat gagaattcat tcaattttaa gtcagcaggt
      541 ctataatata gattaaattc ggtatgtaaa caaccaagca acagatactt tcgggga
//
LOCUS       KCPA01000732             543 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 80208tic ultra-conserved element locus
            uce-5055, sequence.
ACCESSION   KCPA01000732
VERSION     KCPA01000732.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 543)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 543)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="80208tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>543
                     /note="ultra-conserved element locus uce-5055"
BASE COUNT          155 a           96 c          124 g          168 t
ORIGIN      
        1 aggggaaatg cttcagaatc agagatttat gaattcgtag taagcagttt cctggcatgt
       61 aaacaaatct cgctgggctg ttttaggaag gtgggtttgg gcagcggagt aatcattttt
      121 attattctga ttttccaaat agaaatggac atatatgata aaaatgtcag gcgcgctctc
      181 cacgtcaggc tcctaacagg attacatgtc agctcttaat gtctcgctct gtttttcttt
      241 gccatgaatg gctgcattat tgctcacagg aacttcactg taatatatgg taagagacaa
      301 gtagctcttt atggccagtg attattcggt ttgaatgaaa cctgtgattt atgtccattt
      361 aactgaaaag ccttgtaaat tcccagtgct gcatttttcc tcaatagaga atgagtcaag
      421 cgaaagtgac aactaggttg gcgtggaaat gtgcagtgca tcgtcgtgtt atatttaata
      481 tacctgacat gaaaaacgtg tgcacaccac gcagtcacct taagtaggag tgagagtgac
      541 att
//
LOCUS       KCPA01000733             829 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 80315tic ultra-conserved element locus
            uce-260, sequence.
ACCESSION   KCPA01000733
VERSION     KCPA01000733.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 829)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 829)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..829
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="80315tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>829
                     /note="ultra-conserved element locus uce-260"
BASE COUNT          293 a          133 c          152 g          251 t
ORIGIN      
        1 tggatttgtt gattatagtt attttattct ggtaggatga catggaaaaa gaaaagccaa
       61 tacctgagtc tttttacagc taatgagatg agactgaata cagtggagag agaaacataa
      121 ctgaaaattg cattctgcac tagctcaagt ccaaatatat atttgtaata caagacacag
      181 tctccttcac atttgcagca taaaaataac cctcaaacag aaacattaat tgaacagtaa
      241 gtcagattaa tgttttgtaa tattagttca caattattac tctcagctaa ggtcaagaag
      301 tatatagttg gatattcaca aagaaatgac tgatttaaaa acaaagagct ctaatggaat
      361 tcaatagtgc ttttcagtca ttccagttgg catctctatt acctgaaatg attcacagtc
      421 cattatggga gcttccatgc taatagaatg tctatcttct gtaatacaga cacatcaggg
      481 cactaactga gaatctgtca caatgaattt catctagatt tcacttcatc tcttcatgga
      541 ctgtaaaatt tgctcttgta caatgcctaa atttactgtg ggtaattgag agagatctat
      601 agatgcagca cacagttaaa agcagttttc caaagatcta ttgtaaattg tgcagatttg
      661 gttcggttgg gaaaagatta tgaaatgctg gacaccactg gctgctaatt aaaagctctg
      721 aaaatatttt gaatggatca tggtgaatag aaaagtgaaa acagcagcct gggtaaaata
      781 tctctcttgc agctagaaag gcaatgaaaa agcttttgaa atctaagac
//
LOCUS       KCPA01000734             593 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 80426tic ultra-conserved element locus
            uce-197, sequence.
ACCESSION   KCPA01000734
VERSION     KCPA01000734.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 593)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 593)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..593
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="80426tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>593
                     /note="ultra-conserved element locus uce-197"
BASE COUNT          227 a           98 c          109 g          159 t
ORIGIN      
        1 aatcaccacc aaagtaaagg gtgtttgaga aaccgtaagg gcagaataaa aattttttaa
       61 tgaaaaataa catgtcagtt aataatagag ctgacctatg tttaagagag aaattttaat
      121 catgtgcata ttaaatatta ataacctatt ctgttattgt tataataagg ttaagtaagc
      181 ttctccatgc ttaaggaaag agaaaaagta ggaatatgta acagtgaaaa aaagcactga
      241 gaagcagaga cataaggaaa atgtgtcaac aataaacaag aggaaatgag aaagaaggaa
      301 aagatgaagg tggaaactaa tctctatgtg tcattatgac tgccagagta ctggcaaagc
      361 agcaacatcc ttttatttca attttaatca tttctgaatt ttaataccct gctccttttg
      421 taattctcct ggcattccct atatgcatcc atcccagcca aaacaccagt gtaaattaaa
      481 tggcacgcaa ccacaccgct gatgtagctc tcccagtaga gccaattgag tgaccaaaaa
      541 gcagagaagg tatgactact ttgatagact actggccaat taagtgactt aat
//
LOCUS       KCPA01000735             699 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 80535tic ultra-conserved element locus
            uce-4295, sequence.
ACCESSION   KCPA01000735
VERSION     KCPA01000735.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 699)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 699)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..699
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="80535tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>699
                     /note="ultra-conserved element locus uce-4295"
BASE COUNT          209 a          158 c          146 g          186 t
ORIGIN      
        1 gggctaaggc tgagcagcag cctctaaccc cttcttctaa aacaagctta gtctttgttg
       61 cactgtattt acttctgttt tccaggagta gggaaaagca aacaatgtag aaaaccttta
      121 atttcacccc agctggtaaa aatgatagct ggatatgcac acatcagtat aatcgtctcc
      181 taaacaaatg gcacaatgac aaaccgaggg ggcggggaga gggggagcag agcacaagct
      241 ggtgttttca atttagaaag tatgcattat ttacactgcc attattccac tcaatttgag
      301 ttcacgcttt agtcctaatt tcagtataat caaagtcaat gaatatttaa tcagcattgc
      361 ttccagaaat tgagtaatgc cattaacata atgtccccag gacttcaatg ctgattttcc
      421 tcaaaagcat gggacttcca ctcttcctgc ccatcagttg atgctctgat ccccaccttt
      481 gctgggctta acaaggtggg ccaaaatgca gtgaatggga gcaacacttc ccaaatgcag
      541 agatgcgtcc ccagtgatgc tgaagcccca gggtaggtaa taaaagtaga gcatttcact
      601 tcaatatggc tcagtatgca aaagcaccat aataacaata atccatttgc acttctggag
      661 cacctttcag cggaggggct cgagtcattc tgcaggcat
//
LOCUS       KCPA01000736             674 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 80647tic ultra-conserved element locus
            uce-1899, sequence.
ACCESSION   KCPA01000736
VERSION     KCPA01000736.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 674)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 674)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="80647tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>674
                     /note="ultra-conserved element locus uce-1899"
BASE COUNT          216 a          137 c           95 g          226 t
ORIGIN      
        1 tatttataaa atacatagaa gtctatcctt gaaataacca tatcatgaag ttttgatttt
       61 gacctccata ccaaagatgg acaaagatgt acacgcttat atattaaagt tgtgtgttac
      121 actttatatc aattaaataa atattagaca aactcctact actctttgtt tagctgtgtg
      181 gggctcagct gtgttgcttc taaccccaac tacatcactt caaattacca gtaaattaac
      241 agagtaacac tttcaacctc agagcagatt tgatccaaat agtctttaaa tgccatttct
      301 gttcctatta acctaaagat cggcatagca gatatttttg taaggctgcc cagcaataca
      361 gggcattaat ggctaagttg tgacagcact tttcatgatg atttatgatt cagtgtttaa
      421 cttgattact ccactgctga ctctgaatac tatttcaatt agtgcacaga aggtcacatc
      481 acaaatattc ctctataatc tattcctatt aacactaata cacagagtaa ccaaatcttt
      541 tcacccttgt tgattcaaac catccatagc actaactgca gacttgttta ccagtttact
      601 gctctggaca tatctgaaat ggtaattttc agtctttgag tatcattagt agctgtacca
      661 taccatcatg aata
//
LOCUS       KCPA01000737             793 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 80756tic ultra-conserved element locus
            uce-6885, sequence.
ACCESSION   KCPA01000737
VERSION     KCPA01000737.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 793)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 793)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..793
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="80756tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>793
                     /note="ultra-conserved element locus uce-6885"
BASE COUNT          254 a          140 c          129 g          270 t
ORIGIN      
        1 taatgaatgt tcctttcatt ctgcatttct gtataatatt gaaaattgtg tttttattag
       61 aagaggtatt ggatggaagc caacaatttc ttcttttaac ttgatatttt gggctctgat
      121 ctttgttaaa actacaatgg catgtatcta gtacagtcag aggtcatttc tatagctact
      181 accatttcct atcatttctg gggaatgttt gttttcaaaa caaagaattg ggttaaagct
      241 taagtatcgt atttcagaac atatttcaaa ctgaaattaa gaatgctaaa acctttcctt
      301 taaaggtcag atgatattta ttattattat aaaaatgatc tgtgatttat gaatttaact
      361 tctcgtaaac ctcctttgta acagaatatg cagtcagaag cttaacatta cattgttttc
      421 ctttgacaac gtatccacga gaccactgca gctgttcctt tactcacaat agcagattaa
      481 ttaacacaat catatgctgt tggctcctac tcaatgagta ggtctgcagt gggatagata
      541 ggtaaatcct ttaaatgtgt atgagataaa gaatatacta tagtagtttc ataactagcc
      601 agttttgctt ctgactagtc agccctatca gcaatggttc actgactaca gaagctgtga
      661 gcttacattt caaaggcagc cacacctatt acagagcaat aatgcctgaa tcattgcaaa
      721 actcaaatat gtaaaagcac aggcgcgctc agaaatcacc atatttgcta aaataatctg
      781 cttcaagcat ttt
//
LOCUS       KCPA01000738             760 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 80870tic ultra-conserved element locus
            uce-8043, sequence.
ACCESSION   KCPA01000738
VERSION     KCPA01000738.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 760)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 760)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..760
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="80870tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>760
                     /note="ultra-conserved element locus uce-8043"
BASE COUNT          248 a          147 c          156 g          209 t
ORIGIN      
        1 ttgcttgaca agcatctctc catgcatgtg gaactcccta ctcatggctc atcccatgtt
       61 gcacatgcac tgccacccat cacacttccc acattgggtt attatcactt agccctagga
      121 ggcacgattc ctattccaag tgcccactct gaaaatttcc ttttgcactg ctgctgtggc
      181 tccagctcaa taaaagatgg cacaaaacac ttcaaagaaa taacatatgc atccttgggt
      241 tattgtgccg aagaaagaga taaaacagga acaaagtaag aaattatatt gtcagaaaaa
      301 ttgtgaactt tttgattggg gatgacattt attttaagtg tgcaatgacg gcagggaatc
      361 tgtcagggta agacatggca gaggtttcaa cgtttgttaa gagcatcatg ggaatttaac
      421 taaaactgtt aaaactgaca ctattggctt ttgttaacac attaggcatg ggaaaagtgc
      481 cagtcagcat atcctccata gcatcagttc agttaaatca tctggaaggc tcatagaact
      541 gggtgtgata ataaatgcaa cgttttccac acacggatag agggagcaga gagggacagg
      601 accattttga caagaacaac ttttaaaaac ctgcacctgc tttgtaattt agcattcaag
      661 agggaggaag gagtttcagc tttcaaagac aactgaaaca aacttactaa gtgcttatag
      721 tagaaaataa cttaatacta gagtgtatat ttatggaatt
//
LOCUS       KCPA01000739             827 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 80977tic ultra-conserved element locus
            uce-574, sequence.
ACCESSION   KCPA01000739
VERSION     KCPA01000739.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 827)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 827)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..827
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="80977tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>827
                     /note="ultra-conserved element locus uce-574"
BASE COUNT          223 a          142 c          189 g          273 t
ORIGIN      
        1 gatttcaaaa cagacttgag gttccagagt gcggccatcg gtgcgctgca ggtactgctg
       61 agggccagct gggccgcggc gcttttctaa caacattttt tcttgtgctc ttgaaacagg
      121 aggccagcga ggcatatctg gtgggtctgt ttgaagacac aaacctgtgt gccatccatg
      181 ccaagagagt taccatcatg cccaaagata tccagttggc tcgcaggata cggggagaga
      241 gggcttaagt gaaggctgtt tttatggtgt tttgtagtta attctgtaaa atactttggt
      301 tttaatttgt gacttttttt gtaagaaatt gtttataata tgttgcattt gtacttaagt
      361 cattccatct ttcactcagg atgaatgcta aaagtgactg ttcacataaa cctcagtgat
      421 gttgagcctc gggctcagga gtgacaagtt gctaatatgc agaagggatg ggtgttcttt
      481 cttgcttctc atgcatgttt ctgtatgtta atgacttgtt gggtagataa acttgtaagg
      541 tactagaatt gatataaatg tgtacagggt ccttttgcaa taaaactggt tatgacttga
      601 tccaagtgtt taacaattgg ggctgttagt ctgaccatgc atcactgtga tcaaatgtgg
      661 acttccttca gagggtgaaa ctacaagtct taaccacagt gtaacttaca gtttcctaaa
      721 aacgtaaacc tggcagctat agaatacact atgtgcattt ataatagcta ttttatatat
      781 tgtagtgtca acatttttaa attaaatgtt ttacattcac atctgag
//
LOCUS       KCPA01000740             381 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 81077tic ultra-conserved element locus
            uce-2347, sequence.
ACCESSION   KCPA01000740
VERSION     KCPA01000740.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 381)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 381)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="81077tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>381
                     /note="ultra-conserved element locus uce-2347"
BASE COUNT          124 a           54 c           71 g          132 t
ORIGIN      
        1 taaaaagagt gttatctatt agttcaatta gacatcagac atttactttc cagtgtattt
       61 gaagactgat ttgatttggg tccaatcatt taaaaataag agagcagagc tgtgtacaga
      121 gctgtgtaca gatatctgta gctctgaagt cttaattgca aattcagata aggattagaa
      181 ggggctgtat ctctgtagac caaaggtatt tgctaatacc tgagatataa aagtggttaa
      241 attcaatatt tactaattta ggatttccac tttggatttt gattaagctt tttggttgaa
      301 aaccccacgt tattaagctg tgatgaggga aaaagcaact ctttcataag cctcacttta
      361 acgctttatt tcaaataatt t
//
LOCUS       KCPA01000741             669 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 81180tic ultra-conserved element locus
            uce-6792, sequence.
ACCESSION   KCPA01000741
VERSION     KCPA01000741.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 669)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 669)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..669
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="81180tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>669
                     /note="ultra-conserved element locus uce-6792"
BASE COUNT          206 a          131 c          154 g          178 t
ORIGIN      
        1 tcagcaagtt acagttttgc tttttatttg aagagttggg agcaggaagg agactgccta
       61 attgtagtgg aaatttatca taatccatta tttaaaatat tctactttgg acagcaaggt
      121 aatatttaaa agcagtcagc aagaagtgga aactctggtt ttgtaacagt tcacatgtca
      181 gactggcaaa gtgcccacag tgtacagcag aaaaatctat ttaatgtctg ccccacaagg
      241 cgacatgagg cttgattggc agaaagcaga gagtggcttt tgatcatgtg tcctaacaag
      301 cagttccagc tcctgtctct tcggctgagc ggctccacat tacctattca aacagaagtg
      361 acaggccact gcactactct ttggctctag tctcacacag tgggagctat gctggagaca
      421 gagccactga ttaaatatat cactttttca agacaagcag gttgtctgaa tcaaagttgg
      481 acagaataga ctcaacatta ttaaaagagg atataaaact ggagttgagt gatgttaggc
      541 cagtgtgtac agcctcaggg attcacagac tgacaagggg aataaggaac agcagaactc
      601 ataaagcagg gtcagaaatt agctgtgaca ccttggccat tttcccatca cttcagggcc
      661 actgtgttt
//
LOCUS       KCPA01000742             343 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 81278tic ultra-conserved element locus
            uce-2365, sequence.
ACCESSION   KCPA01000742
VERSION     KCPA01000742.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 343)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 343)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="81278tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>343
                     /note="ultra-conserved element locus uce-2365"
BASE COUNT          127 a           40 c           62 g          114 t
ORIGIN      
        1 tagatactta taaatgagat attatatttc catacatttt atttctggcc acatctatga
       61 atctaatatt gacctggagt tatctgtgat agagaagtta ttaattttga cagatataag
      121 ggagaagcta atatcctcct tttacaaaca cctaatatta atctctagtg atgtaaacga
      181 gaactccaga atggcttggg gtggtgctgg aaatgatata agattgaaat ttgataatga
      241 aaaagggaaa gattcatttt agaaaattga taaaatagat aaaaaattgt atttcctgtg
      301 aaataagtgt gggaagcaca acttagattt agcatccatt att
//
LOCUS       KCPA01000743             444 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 81379tic ultra-conserved element locus
            uce-4798, sequence.
ACCESSION   KCPA01000743
VERSION     KCPA01000743.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 444)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 444)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="81379tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>444
                     /note="ultra-conserved element locus uce-4798"
BASE COUNT          163 a           72 c           57 g          152 t
ORIGIN      
        1 tgttccagat attcaggatt caaaagaact ttcatttcct cactgaaaaa agcaacagtg
       61 aacaatccaa atatgaatgt ttatttttgg tcagcgttct gcacgtacta ttatgtattt
      121 ataagccaac tttcatataa agtgcaaatg agaaaagtaa aaaagagcaa ctccattgaa
      181 caaatgaagt ctttcctttt tataaagatc aaaaacaaat tagctgcctt gtctgcacta
      241 caatgaagta accatctaat tattccaaat aacaaattac tgaatgtcac aatgtattat
      301 ttgaatatgc ttgatctaga ataattgatt gctgcacaat ctatcactgt ttatcccaaa
      361 caaaatatgg ttactggtca aatatgcagt atcaaaacat taatttattt tgttttaata
      421 gcctgtattt ttattgtact ttaa
//
LOCUS       KCPA01000744             672 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 81488tic ultra-conserved element locus
            uce-2882, sequence.
ACCESSION   KCPA01000744
VERSION     KCPA01000744.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 672)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 672)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="81488tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>672
                     /note="ultra-conserved element locus uce-2882"
BASE COUNT          173 a          102 c          130 g          267 t
ORIGIN      
        1 tttacatttt gataaagaat tgttgatgct tattttaata agacatccat tggagtataa
       61 cttggtagtg tgtcttgcat cactcatttt cttatatttg gaattgtcct gtgccataac
      121 ttttctgatt ttttctgatc attctttatg atcatgttga ttcacagctt tctgaaaacc
      181 tgcttaaaca ttaaaatatt ttcgaagaga tgctgctgtt gtgatactgt gtttcatttt
      241 gtaattccat ctgctgctta ggccagatat gcattttctg gatgcaatct gttggtttcc
      301 aatggtttac tacatggtgg gctctatcga caagtaggtg aaataactgt tagacctttg
      361 tagtctcagt ggtttgttgt gtgtcgtcat tgcatgtttt agtgtgtgta ttgtagttgg
      421 agatgagctg tgtgctgtat ttcaaatttc gatttataaa ggagctcatc agtagggagc
      481 acaagttaat atcttcaaaa tcgtaagatt aacacttact taggtgaatt catatgtttc
      541 tttatagccc tgattctagt gtcagtctgt actgagattt gttggaattc attgattcag
      601 gttttgtaaa gatagctaca gaatgtacag tcttgaataa aagtcttcat cttccaccac
      661 ttaaattatc ac
//
LOCUS       KCPA01000745             705 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 81595tic ultra-conserved element locus
            uce-6746, sequence.
ACCESSION   KCPA01000745
VERSION     KCPA01000745.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 705)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 705)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="81595tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>705
                     /note="ultra-conserved element locus uce-6746"
BASE COUNT          182 a          151 c          163 g          209 t
ORIGIN      
        1 agctagtttg ctgatgttag aaacagttgt tcatattagg aacacctaat ttaatttcat
       61 gaaagagaca taagatgcca gtatgtgtat gaatctaagg tatgcgtttc ctaaaaggaa
      121 ctaaaactct gtcattccaa agttgctctt ctttttgact tccagcttgc atggggactg
      181 ctgtctggaa gcagtaactt taactttaac tctaaggctg ctgatgaggt ctgtctgtgt
      241 gatcttcgta agcagataag ggtagggaga cagctcagag cagagcttgt ttacagcagg
      301 acagaagaaa acagctagac ataaatgagg gctgacggtt tcatgaagca caattggttg
      361 atcacagatt caatatgact gccctgaact gagcgatgat ccgtacagta tgcaaaattc
      421 actttcttgc tggtctgtgc ccaccagcct tccagcagct ttcccagagc ccctcagcca
      481 tggctttgag tggaaccaga gctgaacgca gcattgttgt acccaattcc ttttgacaac
      541 aatcacattc ttttaaaaac ttcataggtt ttagttgtca ctggttataa atgaccctcg
      601 ccattgctgc tggctgttgt tgggtgctcg ctgctctccc acagatgcga gtgctgcagg
      661 ttctggtgct cccggttttc ctttgtttat cagaaagcag gcggt
//
LOCUS       KCPA01000746             408 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 81706tic ultra-conserved element locus
            uce-2208, sequence.
ACCESSION   KCPA01000746
VERSION     KCPA01000746.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 408)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 408)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="81706tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>408
                     /note="ultra-conserved element locus uce-2208"
BASE COUNT          133 a           71 c           75 g          129 t
ORIGIN      
        1 gcttagctct cgcaaatcag atagggccca aatactctag ataaatcctc agctaaattg
       61 gactcaagtg tgttaactat acatggatgt ataagcaaga tttatttgtc ttcacaggtg
      121 gaaacatttt ctggtgtgta caagaagctc acaggcaaag atgtggtgtt tgaatttcca
      181 gaattccagc tgtaaaatgc aaaaagtggc tgaataaaca actgttcata taactaattt
      241 aatttaaatt tttaattcca tattaaatgg ttcacgggac ttcgctgctg ttgacatctg
      301 tgaaaagtat taagttttaa tggtagccct cttaggtttt tcttggcact gttgcaacac
      361 aaaaaagagt ccacactctg caaaaagaat tcatactgcc taagtatt
//
LOCUS       KCPA01000747             414 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 81814tic ultra-conserved element locus
            uce-7665, sequence.
ACCESSION   KCPA01000747
VERSION     KCPA01000747.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 414)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 414)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="81814tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>414
                     /note="ultra-conserved element locus uce-7665"
BASE COUNT          130 a           77 c           74 g          133 t
ORIGIN      
        1 ctccactgcc tgccctctcc acaaacttca gcccctcttc ttcctctgta ggaaatttat
       61 gccctttggg ttcaaaaaag gctcctagag ggaaagagaa agagaatgaa aatgatttta
      121 attttttttt tggcgtagaa atgaagctga tattgaaagt gagtaaattt taatgaaacg
      181 gtgcaaaaat gacatcattt actcagaaat cattaatttg tcagcattaa tatttcagct
      241 acaacattgc ctgtcattct gtgccagcaa tgactgataa atctataaaa gtgtgctgct
      301 aatttactga atatttatgt gcagtgtcat ttgcagagta ggatttgaat ttatttcact
      361 cggtattcag ctggagaaca tttctaacaa acccaggctg tgcttcccaa ataa
//
LOCUS       KCPA01000748             648 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 81925tic ultra-conserved element locus
            uce-6311, sequence.
ACCESSION   KCPA01000748
VERSION     KCPA01000748.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 648)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 648)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..648
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="81925tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>648
                     /note="ultra-conserved element locus uce-6311"
BASE COUNT          187 a          112 c          127 g          222 t
ORIGIN      
        1 aatatagtgc ttattttttg cttggttttc tagtacttat tcaataggtt aaagggcaat
       61 accatctgtt tcctaacagg acattttgtg taagatttgc aagtcctaca ggtaccttta
      121 agcatggata aatatgcact catggtttca gccggatagt ttttcaccac caaaggatga
      181 ttatgttgtg tgccttgaga cataggctat aatatatttc ctgtcccttt attgcatttt
      241 ggaatcataa acaatgactg tttggctcaa agccatttat tcagcccaaa aagacattat
      301 ttgcacaaca aaaatcaata aaaatgttac taggtctggc tgaatacttt gcttaactgt
      361 gatatttgtc tgtcactgat ggcatgccat ctctcgtagg agactggggc caaaacagag
      421 ctattgatcc agtcatcagt gatggattct ggcatttgga acgggctgct gcagagaatc
      481 tcgattaaaa aaaatatttc tatgttttgc ctgcagcaga gtcaagataa gctgaatgaa
      541 gagattttct cttttatatt gggtttctcc tcttgtggtt gttaaatgct ctggaccaaa
      601 gttcattatt gaaagaatta agtcaatcta tgtttagcca aaggcttt
//
LOCUS       KCPA01000749             524 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 82030tic ultra-conserved element locus
            uce-6797, sequence.
ACCESSION   KCPA01000749
VERSION     KCPA01000749.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 524)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 524)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="82030tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>524
                     /note="ultra-conserved element locus uce-6797"
BASE COUNT          159 a          105 c          109 g          151 t
ORIGIN      
        1 gtagcacttc aacatttatt gtgtttacca gtttttcaaa agcacttcaa aacagtagga
       61 tgagcctcag gtcaatgcag ctgatttcta acttttatgt ctctgccctt tccaggggaa
      121 gagctgcaga gggagccagt gacaaagagc caaagtctgt aaggttttcc caagagcatg
      181 taacaaatgt aggaggaaga ctataaatca ggatccaaaa tgtactgtcc acggcagcag
      241 ctatgaacct tcaacaagac atttttcgag caaggttttg gaactttggt gggctctgac
      301 ctgcagtttt cacttccaaa ataacttgac ttttctaaag tggtaatttc attttcatga
      361 taatgctaaa ctcaagccac atgtgcttta atttaaagca ggactcgggt ggtggaccct
      421 gccaagaaac agcagagaaa catgcttatt ctactagttt gcttgaggca ttcagcattt
      481 ttgaatgcct aggcagaaat atagttttta aataagccaa tccc
//
LOCUS       KCPA01000750             547 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 82137tic ultra-conserved element locus
            uce-5789, sequence.
ACCESSION   KCPA01000750
VERSION     KCPA01000750.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 547)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 547)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="82137tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>547
                     /note="ultra-conserved element locus uce-5789"
BASE COUNT          174 a          102 c           99 g          172 t
ORIGIN      
        1 gactttgaaa agaatagagt ggtgattaac agcaatattt tttttaatga aacacaacct
       61 ttcatccctg tcatcttctg accatccttg cttgtacgca gctctctgac aagtagaata
      121 ataacggtca tacatcactg ccctgaaagt ccaatcatct aaatcttcac tcgctgcagc
      181 ctctgagact caattacttt attgacatgc aatcttcata aggggagaaa tattgtgcat
      241 gtaaggtcac ttggttatga agacatatta tcatattatc tgcatgaggg ttgcagggct
      301 aagacctgac agagctaatt ataatggtac atgatagaga gctcagtaca cattatttgc
      361 ttggctgaaa ctaaaggtga ggtaagacca tgacatcatg gtttcaaaag aaaataattc
      421 cctttccctg agagactatt acttttattg tttaatgttt tgcacagatt atattcatgc
      481 aagaaagcag tgagaatttc tgaattcaac tgtttccatt tggaagtact taactcttga
      541 agaaacc
//
LOCUS       KCPA01000751             858 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 82246tic ultra-conserved element locus
            uce-949, sequence.
ACCESSION   KCPA01000751
VERSION     KCPA01000751.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 858)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 858)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..858
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="82246tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>858
                     /note="ultra-conserved element locus uce-949"
BASE COUNT          242 a          140 c          195 g          281 t
ORIGIN      
        1 gtgtcattgc tactaactgg agcttcatag aggaagaaac cagagttgtt ctttcaaaga
       61 gacaaattac agtgtgctcc agatgaagcc agcaaagcca tggagaggct acagtttatg
      121 ctgggtctca tgtgatattt tggtcctttg accatggggc tcctggatgt ttttgccact
      181 catgctgaca gtttgtcagg tcactcctgt gcaactcctg ctgcatatgt tgcaggacat
      241 gtggaaagcc attagttgtt tctgtctgcg ttactgtcat tctaaagtac aatcttgcca
      301 tgcactttgc actacgaggg ctaggaaacc agtatctttt atagtaatga cttccagttt
      361 acagccttca tttgttatat ttcctcaata gctgttgtgt tgagattaac tgcataaatg
      421 gtctgcagct ggctgttatg aattaaggga gtttaatcaa agtatttcta atgtacagca
      481 taatgataat acatggggga agtactattt aagagataat gatggcttca gaagatcact
      541 gttgtaatgt ttagtgcata tgccttcagc attgaatttg ttgttgttct gaatatgctt
      601 aatggatcag tgaaaagctg cctaatgtgg gattgtttga tggggctgac agagctggaa
      661 ttagcccatt gctgtttact gcatacagcc attaagatta attgctgcca gataattttg
      721 actgttttta tcttcgggaa aaagtgtcac taatgggttt ataaattggt tcactattac
      781 taatagtaag gccagtgtaa caggagagga tgtgaacagc taattctaaa gataaaggta
      841 aaaagtataa agtactat
//
LOCUS       KCPA01000752             664 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 82356tic ultra-conserved element locus
            uce-5481, sequence.
ACCESSION   KCPA01000752
VERSION     KCPA01000752.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 664)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 664)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..664
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="82356tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>664
                     /note="ultra-conserved element locus uce-5481"
BASE COUNT          234 a          101 c          112 g          217 t
ORIGIN      
        1 ggaggtcagc tccttattta cacaagagaa cgtgaagaca gaaattgcca cctgacagaa
       61 aatagagaga atgaggcata aaagttttct agtttactta ttagcactat atgtaattgg
      121 atggaagtag caggtttcaa aaatttgtct tactgtaatg accataattt tttagagatc
      181 gaaaatgaat ctgactagaa aataccatta aactaccaac ttgcttaaaa tttaaagggt
      241 aattcacata taatgctttt atttaatagc ccaatttaca aaacgtctaa aattaatgca
      301 gatcttttca ggacaaaatc agctgtaact gcaccaacta atttttgctc atttgaactg
      361 aattattaat aagagagaaa tataccatat gttcccaaaa gagctggata catttatttc
      421 aaataaaatt gccgtgtttg gtggaatata agaggtttaa atgctttcag agaaatgggt
      481 tacttatata ctgatttaat agagtataaa tcagactgca taattaggga cacagctgtt
      541 tcctaaccta aagctgccag cttttgttgg ttaagttcct ttatcacctg catggcttta
      601 atcagcaata atttgttctt cttgtggaga aatacaagtt aatcaataat tttgctgttt
      661 gcac
//
LOCUS       KCPA01000753             696 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 82467tic ultra-conserved element locus
            uce-6805, sequence.
ACCESSION   KCPA01000753
VERSION     KCPA01000753.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 696)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 696)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..696
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="82467tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>696
                     /note="ultra-conserved element locus uce-6805"
BASE COUNT          240 a          117 c          171 g          168 t
ORIGIN      
        1 tattttgtaa ctgagggcaa gccaggcaaa actaaataga tagcaagggc tgacaagcaa
       61 gttagaagga aagggcaagg gttataaaac taatgcgtgt tgtattatgt agtgagtgaa
      121 tcatacggat tatggaccaa ggactacata attaaacatg taaggtatca aggtaaagta
      181 ccagaataca taaagaggat aatttcttta gtcagcaaat gggcaataac aggaaagaat
      241 ttttgtcttg ggatagtgag cagttgtata aacatatgat gcaaaggctt tttcaaatag
      301 acataacatt gccatatgtt ccatcaaaaa actgcagagg gacttgggaa aatcagaatg
      361 atttaagagg gactatacac atttctgcca ccacttggtt agctgaacac aggcagccaa
      421 aggtaaggag tgccgttaaa caagggcatg ttaagagacc agagtgtgcc ccggagattc
      481 tcacactgag ataacgaaag ctctcaaatg tcaccacaga actgaagttc tccttaaaaa
      541 gtggcagaga gactgtgctt tctctgggtg gtgggagctg acattgcata tgggatagct
      601 cttcccagtg gactcaagaa gcccattaaa gtggctggct atgattggaa ttatagctac
      661 tgcagcagca gagacacact gaggtgcaaa ctgatt
//
LOCUS       KCPA01000754             587 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 82579tic ultra-conserved element locus
            uce-513, sequence.
ACCESSION   KCPA01000754
VERSION     KCPA01000754.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 587)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 587)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..587
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="82579tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>587
                     /note="ultra-conserved element locus uce-513"
BASE COUNT          148 a          154 c          125 g          160 t
ORIGIN      
        1 agcgtgaagg aacagctctc tgtatgggcc tgaaacgcaa cgccaagtgc tttgggacca
       61 tttgctagca tcccgcacac atcctgtaac ctgctgcttt ttacactgac catgctctcc
      121 agctgccctg agtgtcgctt caggatgtgt cgatccgagg gggttacgca caaatcgtcg
      181 ccggcgccgc aagtcatctt cccagtagtc gaggcgccag aactcacgag gacgactaca
      241 atgaaacaga ggagccacat atgttagcaa ttatcaacca gcatggtagc gctgaatttc
      301 tgcataaagc tctccttgtt tgcgctgctt tcgctctctg caatctttta cttaggtatg
      361 tccttgaaaa taacaatatc accttccact ctaaggaact cctttccctt ttttcttgga
      421 aggtgaaatg agcactaaat acatcatttt gaaatgaatt gctgacagtg tgatcagttt
      481 ccccacactc tagtggcatg tgctccgatt tcagcctcat ttcagcctca gcagggcacc
      541 tttctcagtg actgcattta taaaccagaa tagggaaaag gctatta
//
LOCUS       KCPA01000755             634 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 82690tic ultra-conserved element locus
            uce-6524, sequence.
ACCESSION   KCPA01000755
VERSION     KCPA01000755.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 634)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 634)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="82690tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>634
                     /note="ultra-conserved element locus uce-6524"
BASE COUNT          144 a          162 c          174 g          154 t
ORIGIN      
        1 ccatccatgc ccggtcacaa cccgatgagg ccgccggcct tcctgcagca gggcatgatg
       61 gggccgcacc accgcatgat gtcaccagca cagcccgcca tgcccggcca gcccgcgctc
      121 atgagcaacc ccgtggccgc cgtgggcatg atcccgggca aggaccgagc ccccgccggg
      181 ctgtacagcc acccgggccc tgtgggatca cctgggatga tgatgtcaat gcagggcatg
      241 atgggacccc aacaaaacat catgattccc ccccagatga ggccccgagg tatggctgct
      301 gatgttggca tgggaggatt tagccaaggc cctgggaacc cagggaacat gatgttttaa
      361 gctgctacca taagactgga tgttctgatc cttgtcaaga tgagattcca agtcctgatg
      421 gcttttttgg gagcttcagg agtacagttt ggccatgcaa taggtgaaaa gagaccagag
      481 gacgctttgg gaaatctcga atgtatggaa ttacctgatt cattttaaca ggttgttttt
      541 tttttaagat ttatttttta aaaattattt ttgtggactt gggtatcccg tgacggcacc
      601 tgctttgaga atctgtagct gtattttgag aatt
//
LOCUS       KCPA01000756             618 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 82801tic ultra-conserved element locus
            uce-2943, sequence.
ACCESSION   KCPA01000756
VERSION     KCPA01000756.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 618)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 618)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..618
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="82801tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>618
                     /note="ultra-conserved element locus uce-2943"
BASE COUNT          215 a          105 c          109 g          189 t
ORIGIN      
        1 cctaagatca gtatttcctt caactcacaa acatagggca gcataacatc atttcagatc
       61 gaaagttagc cctgaatgtg ttaggagaaa tgttacacac gtattttgat caaatacctc
      121 tgaaggccca ctaaaacaga tattgtcgct ctatgaaact tttagaggcg gtgtaggggt
      181 ggaaataatt aaaatgttac ctttgccaag taattcccaa tgtatcctca ctggcactgg
      241 ggtataaatg cctgccgttt tgattcatgg tccagtcaca aattctcagc tgtcaattga
      301 aacctagcag tcagatatgg atcaggcatt tttagtattt aaatgaatac atgcaaacta
      361 gtaacgtaca tggcaaaagt cttactttcc caagaagtaa ctttaatttg ttttgagaaa
      421 taaatgccta tagacttgtt atgctatttt aatatgatcc tctattaata aagcataaaa
      481 aagttagagt gtagcacata acaattagcc attattagat tacaaactga gctggaataa
      541 aaggaaatgt taataatcaa tagtgcgata ttttaagaaa ggaaataaat atgctggttt
      601 ctaagcaatg ctctccat
//
LOCUS       KCPA01000757             733 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 82909tic ultra-conserved element locus
            uce-7160, sequence.
ACCESSION   KCPA01000757
VERSION     KCPA01000757.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 733)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 733)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..733
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="82909tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>733
                     /note="ultra-conserved element locus uce-7160"
BASE COUNT          260 a          121 c          131 g          221 t
ORIGIN      
        1 accttagagt ggcaactgta aaaaagtctc attaaaatta atgcatagta gtatagatta
       61 aattaaaagc caacaggagc tcaatgcatt gcaactagca ttcctgaatt agcagtttct
      121 gttaagacaa gtaaaaatat ttgcagtgaa aaatttgcct tttactatta ttcttcacat
      181 acagtttgct atagttttaa aatagacagg caaagaaaga aagatttatt tgacctacct
      241 gtaagtcttg aaatatgtat ttagcacagc tgttcttttg tgtttaaact catcacaaaa
      301 atgcggcttt aatgtaaccc accattgatc tgcagtaagt ggaaacaaaa tctctcctta
      361 attagtatca tccaatcact tttttacatt tctacagaac acacactgtg aactgtttaa
      421 tggactatta tttagaagag tggcaaagag cttgcggcat atagtgaaaa taaaaactag
      481 ctgtgtcaat gaaaaatgtg ttgcaaaata atggaaaaaa agatgtttca ttaagatggg
      541 cttcactggc attttactgt atagatgaac actgctccaa ttactgccaa caatggggaa
      601 agagatagag agatatagat tcattacttt caacaccctt aaccgtctac cactgaattc
      661 gcttatctgt tcctttttct acaggacctg cgtggagggg ggaaggaata aacaaagaac
      721 tgagtagagt gaa
//
LOCUS       KCPA01000758             703 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 83015tic ultra-conserved element locus
            uce-1639, sequence.
ACCESSION   KCPA01000758
VERSION     KCPA01000758.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 703)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 703)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..703
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="83015tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>703
                     /note="ultra-conserved element locus uce-1639"
BASE COUNT          235 a          144 c          114 g          210 t
ORIGIN      
        1 ctccctttca attctttgct ttggaactcc aagatactgt agtttacttt ggaaacacgg
       61 aagccaaatg agtatagtca tgaggaaaga cttcagttat acaatccatt aaagaaaaca
      121 atagagcttg cagctgagct attaaaaagc gtagagcaat ttttatttca atggctacat
      181 tttatttcct cttctgagtg actgctaaca aagggctgct gaaaggactg gataaaaagt
      241 agacgtcaga tgcaagatcc atgagttaaa caacattatt agatacaatt tcataaaatc
      301 tagttgcttt tctgctacta gaaatcatgt ccttttgtca acttgtggtc acatcagcac
      361 ttctgttgat ataatttgct ccagctgcag agcatagctg gcctacaaat caagaactag
      421 aatagggaca gtcaggaata actcaatggc ttggataatg tgcaaatcac cacacatctt
      481 gctattagta taatttattt tctctcagaa tatttggaac gtgaaaaatt tatctttagc
      541 aaaacagccg atctgacact ttactgagaa cagaactggc tggctagcat attgtaacac
      601 cctcctcccc tcacagatca cacacacata cacactctat aaccatttaa gtggaattat
      661 catatcaaaa cccttcatta tctttcattg aattcagacc aaa
//
LOCUS       KCPA01000759             381 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 83122tic ultra-conserved element locus
            uce-800, sequence.
ACCESSION   KCPA01000759
VERSION     KCPA01000759.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 381)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 381)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="83122tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>381
                     /note="ultra-conserved element locus uce-800"
BASE COUNT          102 a           83 c           73 g          123 t
ORIGIN      
        1 tgtggaactg ggaacgctct ctcctccgtg ggactccgca tcagcaagcc acaaggtggt
       61 ggtatggtgt caagcaacaa aaagaggttt tgtttaatga gcttgaactc acaagcctgc
      121 tcatctagtg aactgtgact tttcaaatac caacctatta atgtcaaagg caatactgaa
      181 gggaacagtt ctgtttgatt tagacaatgt gaagtccact atgctctaat atctatcacc
      241 tatggggctc cattcatgcc taatgcttta ttcaagctaa gacctagttt ttatatatca
      301 gattaataca tatctacagc tttgcacctt tctattttga tttttttatt atcagggctc
      361 gccggggcca ttttcattcc c
//
LOCUS       KCPA01000760             670 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 83232tic ultra-conserved element locus
            uce-7532, sequence.
ACCESSION   KCPA01000760
VERSION     KCPA01000760.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 670)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 670)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..670
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="83232tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>670
                     /note="ultra-conserved element locus uce-7532"
BASE COUNT          213 a          128 c          101 g          228 t
ORIGIN      
        1 ttctctgata actgatacca aaatagcttg atataaaagt aagcacgagg cacaaggctg
       61 tgaaagacaa tattttgctg ccactaacaa gggctgattt ctttgtaagt gtacaatata
      121 gtcaaactaa gctttatttc ccaagagatg agatacttca tttatttgtg taacttcctc
      181 agactttata ttcttgtgtg tttcaggact tcagtagttg ccttcttgta atatttcagc
      241 ttttaagctg ttttcttgcc tcactgaact cacataagat acatctgaaa gctttagtac
      301 aaatttactt cgaataaagt cttcaattca ttttcatggc accaaaaaga cagctttaat
      361 aactgcaatg acaaataaac tggaaatcat tccaggcctt ttcacttaac tgacaagtag
      421 aacgctctca taatgagccg caggttttac gttttctctt tgaccataat agcttcattt
      481 aagagcgtca gaccctgaca cttcatcatt tatctacatt atttctcatc ttctttcaaa
      541 taaattatgg aatactagac tgagcacata aaaacaaagt gacttgttat ctgtaaacag
      601 caagataaat tgtccagaag ttcctcattt agttcctttt aaatttaagg gcaagttatt
      661 ggatgtacct
//
LOCUS       KCPA01000761             483 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 83336tic ultra-conserved element locus
            uce-6516, sequence.
ACCESSION   KCPA01000761
VERSION     KCPA01000761.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 483)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 483)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="83336tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>483
                     /note="ultra-conserved element locus uce-6516"
BASE COUNT          147 a           70 c          114 g          152 t
ORIGIN      
        1 ttaccatggc aataagatct tgtgttttaa tgttcttaca gaatttgaaa aaattggcat
       61 ataaaggaac ttggattgat ttaggaagaa gaatttggag ttggagacat tcattcagag
      121 catggaatgc agcactcaca cacacagcta gaggtgatgg agaatcaatt ggctgggaaa
      181 cagcaagaga ttgaagaact aagcagagag atagaagaaa tgagggcagc ctatggtaca
      241 gaaggattgc aacaggtata attaccttat gttgctttct acttgctatt tggttacatg
      301 cgaaaatgca gagtctcgcc ggaaagagtt cacgctaatg gttgctgttc agaatgcgtg
      361 tgtgatatag aattaattac acaatttctt tcagtcgtat gacatgtgtt ctattacttt
      421 gaatggcatt tccattgtgt gtccttttct ctgtattttg tgactgaatt gtctttgcag
      481 tga
//
LOCUS       KCPA01000762             718 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 83445tic ultra-conserved element locus
            uce-3434, sequence.
ACCESSION   KCPA01000762
VERSION     KCPA01000762.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 718)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 718)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..718
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="83445tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>718
                     /note="ultra-conserved element locus uce-3434"
BASE COUNT          235 a          130 c          116 g          237 t
ORIGIN      
        1 aaaaaaacag ggcttcctgg atattcttct tttacctccc ttgtgtcttt actcctactg
       61 cttagcaaag gtgctgactt tatctctcta agccttagtt taaatgtcca acactgatta
      121 ttaatgaaac tagtaggctt ttgtttatta catgtaataa tggtgaatat gactatttaa
      181 tataaatctg acatttaaat tccacttagt tccgagattc agttgatata aacgagtaac
      241 tctttaccct agagtaaaaa ctccctcagt ctgcatttta aagcattgaa gttttcaaag
      301 taatcagttt ttttcagagg aaccaaattg tgaagacatc tgttatgtta ttaatttcac
      361 ataaatctta agctcctcaa ggcctgaaat gaggcttcat tcaagccgaa ttaatgaaac
      421 atgattgtaa gtcccttgca tggaaatgct gtcatacagt attgagttgc ttataatcac
      481 tgagtaatct tgcaggctgc caagggagag ctactttaaa tccctccata aaacaatatc
      541 tgaaaatatc agaacactaa ctatatcctg gaagattaat agcagatgaa aatttctatg
      601 aaatgaatca ttctttctca gtaaaggata caaacatttc cagtaactgc agattgtata
      661 atatggagca caatctatga tccagatgcg aggtgcattt aagctctgag attcgttc
//
LOCUS       KCPA01000763             540 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 83550tic ultra-conserved element locus
            uce-441, sequence.
ACCESSION   KCPA01000763
VERSION     KCPA01000763.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 540)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 540)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="83550tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>540
                     /note="ultra-conserved element locus uce-441"
BASE COUNT          178 a           95 c           96 g          171 t
ORIGIN      
        1 gatattttcc acttgagtgc ttctgtcctt atgttcttca gggaatgtgc actttagaat
       61 ataatacatt tatgtaatat atacatgcaa actaaggtgt ttcaaatata tgagctatac
      121 cgtgatctag aggatatcta ggaggcctgt catacttctc ttacttcagg taaataactg
      181 attgaccttt gtggtgtgct gatacttcac taatcagaac ctgaaatctg tataacaaca
      241 cttcatttac ttgatagaca aaagaacaat tgcacttgaa gtaatgtgat ttctaaatag
      301 acactgcctg tcaaaaataa atgcattaga agtaaaatgt agctcaagga gacaattagc
      361 aaacagaggt gacactgtaa acaggtgcac ccattattcc caaagcttgt ggcaatatat
      421 tcacatcttt tagactgatg gaagatcatg tgacagtttg gtgaattatc tatctgtatc
      481 atctgactga tgaagcctgc tgcagttgca gatcatttaa aaatgcatct cacaaattac
//
LOCUS       KCPA01000764             462 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 83658tic ultra-conserved element locus
            uce-5756, sequence.
ACCESSION   KCPA01000764
VERSION     KCPA01000764.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 462)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 462)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="83658tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>462
                     /note="ultra-conserved element locus uce-5756"
BASE COUNT          161 a           86 c           75 g          140 t
ORIGIN      
        1 tttgcaaagt aggtcaggaa tacccaaagg atacacattt gaaagctaca gatagcagaa
       61 cacaccattt acggctttgt atatatacat acattctata taatataggt agatagattc
      121 aatgatttaa acacactaca tctataccgt gtgtttcaag aacattcaga tatttacact
      181 gttagatcac cactcatttt agacccactc tagtgccagc tgccaggtac acaaatcaaa
      241 atatgttacc tttgttcaaa caatactgct gttcattata taacagaaac tgtcatgctt
      301 aatcttccag gaaccaaaaa ctggtacatt cttggatcag aggtggcttg aaatggtttg
      361 aggcaaaacc gtaagtaaat cttgctgaga aactcagtgc attgatgatt tttagcatca
      421 tctgatctat tagtaaacta aaaatgctgg agtattttca aa
//
LOCUS       KCPA01000765             291 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 83758tic ultra-conserved element locus
            uce-3156, sequence.
ACCESSION   KCPA01000765
VERSION     KCPA01000765.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 291)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 291)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="83758tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>291
                     /note="ultra-conserved element locus uce-3156"
BASE COUNT           95 a           52 c           50 g           94 t
ORIGIN      
        1 ttttgctaat attttactgt tacatctgac aggatttcac attttctgta gcccgccttt
       61 agtacgttga actgccagac agagaaatta ataccctgag tgactgtatt ttaattaagc
      121 aatttcatgc aaattacaaa ttttagattg ccaaataata tattgcacaa aaattgtagg
      181 ctggctgatc tgatatgcat ggagtattac tcttccaggc gctgtgcata catgggaaaa
      241 tgaacaaaaa tgctaatttc caatctacta tgcaaacggt aaaagatgcc t
//
LOCUS       KCPA01000766             365 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 83859tic ultra-conserved element locus
            uce-4670, sequence.
ACCESSION   KCPA01000766
VERSION     KCPA01000766.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 365)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 365)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="83859tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>365
                     /note="ultra-conserved element locus uce-4670"
BASE COUNT          153 a           71 c           43 g           98 t
ORIGIN      
        1 acagtaaaac tacactaaaa gtcatttaac aatatttata acgccataaa atacagtgtt
       61 aaaatatatg aactgcaata tgtaccaaaa ttataaaatt tgtttctcat catcagtgat
      121 taaaaccagg atcattgctc tagcttcaat actcacaacc ctggtgacag attagaattc
      181 aaatcttaat gatcaattta caattaacaa gatagaagtg aaacaaatta aaccaaccat
      241 tatatataac gagacccaat ggactcccat tgttcccctt aattacaaaa cgcaaatcac
      301 aaatactcag tgggtagtgc taagcattaa tctacaacat agaaactcag acagtgacaa
      361 tcaga
//
LOCUS       KCPA01000767             551 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 83970tic ultra-conserved element locus
            uce-6212, sequence.
ACCESSION   KCPA01000767
VERSION     KCPA01000767.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 551)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 551)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="83970tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>551
                     /note="ultra-conserved element locus uce-6212"
BASE COUNT          215 a           88 c           81 g          167 t
ORIGIN      
        1 aacattcact tgcattattg aacattttta gctttattat tataatagaa ttacagtctg
       61 acataaaata aagagctttt gctaaactct gtaaagcaat acatgcttct gccataaaca
      121 atctctatta gatttaggtt ttattgccac atcactgcac tgaggtgcaa taaacattca
      181 atgtcatctt tttaaaatta tctcaggagt aaacagaaac tgtcctctat aagagtgtat
      241 cattattttc aaggaagact tactattatt acatggttta gcaaagcatt gtataaaagc
      301 tacatagaga ataccttgtc tttgataaac tgtgcagtca agtttataca gtataatact
      361 attggcatag actaactaag aggtgatata atgcaatcat tgcatagcaa aaagcagact
      421 agttaagtac atctaatgtg caaaatgcag accaaaaggt agctatgaat tgctagaaag
      481 ataaaatgcc ctaaatgaac acactagttt aacgccaaaa ataacaagat aaacaagtac
      541 acaaaagtta a
//
LOCUS       KCPA01000768             612 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 84083tic ultra-conserved element locus
            uce-1600, sequence.
ACCESSION   KCPA01000768
VERSION     KCPA01000768.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 612)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 612)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="84083tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>612
                     /note="ultra-conserved element locus uce-1600"
BASE COUNT          202 a          119 c          102 g          189 t
ORIGIN      
        1 ctccctgcgt gcttctacca cggtggcaaa cttatttcaa aaattctgat gaaacgcttt
       61 gtaaattttg ttattctgtg atgataataa atcattatag ccttaaacac tcctctagct
      121 tggagcctca gtcacaaatt atcttgtcat tctgaccaaa acattctcca aaaaagcttg
      181 acaagtgcta aaacccagaa catgaaacca tgtgttgttg tgaaagcaag attcagaaat
      241 gtcaattaat tagattaaga ggctactttt agctttactt gtgttgccaa ataaccctta
      301 aaatatgcat agcagtggaa gtctacctca gcaatacagt acttctgtgc aaaataaaga
      361 caatggatct ggctaataga gggaattatt gtatctgtca ttcagacaag gagaatgatc
      421 tagaagcaaa tgtcttgctt ctctttccac tgtatggatt cacaagcaag ataaattctg
      481 ccacttagga gtttaggcat aattttttga aatctgattc agattagaaa ataaaagtca
      541 aatcactgtt atacatctcc ataagtaaaa tggataacat cactgtctgt gtagctgtct
      601 ccccctgccc at
//
LOCUS       KCPA01000769             788 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 84190tic ultra-conserved element locus
            uce-449, sequence.
ACCESSION   KCPA01000769
VERSION     KCPA01000769.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 788)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 788)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..788
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="84190tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>788
                     /note="ultra-conserved element locus uce-449"
BASE COUNT          225 a          133 c          165 g          265 t
ORIGIN      
        1 tgttaaaaag tagaaatgaa agacagaagt tgtaagaaaa acctgttcat tggacagacc
       61 tgcaatgcag taaataatag atgtgaaaga cagcctgttc tggaaaaaag gcagtggatt
      121 tttctgtggg tctaggggag aaaaggtcct ttattctttg gtaacttttc tgattttaaa
      181 tatgtgcttg tctggtcatg aggagcaagg tcattcctac tgctcagggc ctaggctttg
      241 tgctggcgtt ggtgggagct tctctcctct ctccttttcc tccctccctc tatctctcct
      301 tttctttttc tcctgaggtg cagatggcca catttgcagg ttaactggaa cagctggagg
      361 cacattatta gcttcctgct gctaactcat atttgcttag atttttttta acagcaacat
      421 aatttacaag tagtaggcca gtgacaaagc tggcatgttc taaatccgca tctgatttat
      481 ataatgctgt tgcttatcag tgaatgaagt cataattatt gctttgtacc attaaatagc
      541 ataaatatat aaactgttac tcaaattgca gcaaatgttt cctctaggga gctctagaca
      601 aaattttaat gtagtgcatt tgtctgtggt ggcagtttct atggtatata ataatgttga
      661 taaattttac tgtagcaagt gacattttat aacattaatc ctggtggtaa aaatctgatg
      721 aatactacag ctgtactggt gggtacaaga agaaagagag cttttgacac caagtgaatt
      781 gattttaa
//
LOCUS       KCPA01000770             450 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 84295tic ultra-conserved element locus
            uce-7496, sequence.
ACCESSION   KCPA01000770
VERSION     KCPA01000770.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 450)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 450)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="84295tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>450
                     /note="ultra-conserved element locus uce-7496"
BASE COUNT          134 a           69 c           80 g          167 t
ORIGIN      
        1 cagggttagt ttctgtattt gatcaaaata aatcaattat atgacagagt taatttgggg
       61 ttaattatat aattcatttt tcttctgcaa aggtggagaa ctcaggggat ccatgggaaa
      121 atttccagaa taatcaaccg ctgacatatt gggaatgtgt ttatttgctg atggttacaa
      181 tgtccaccgt tggctatgga gatgtttatg caaaaacaac ccttggtcgc cttttcatgg
      241 tcttcttcat ccttggggga ttggttcttc ttcatattca aaacttgatc ctgtttatct
      301 caatgttgta attaagttaa aactaattat aaaacattaa aatacgttaa atttttccct
      361 gtagataaat attttggcac agcttgtcaa attagtcttt ttctaatcca tttaaatgag
      421 taatgcatgt gactacatga gtgccttaat
//
LOCUS       KCPA01000771             638 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 84399tic ultra-conserved element locus
            uce-7605, sequence.
ACCESSION   KCPA01000771
VERSION     KCPA01000771.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 638)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 638)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..638
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="84399tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>638
                     /note="ultra-conserved element locus uce-7605"
BASE COUNT          232 a          121 c           99 g          186 t
ORIGIN      
        1 gcatccttgg ttaggcagct gcagtcccag gttactgact tctctggctc acaccaacag
       61 catcttctcc cctacactag gaggaagatg tgacttctcc agtaccaaac actctgacag
      121 ctgtcagctc ccatgacaca gtacatgtta aataactcaa gtaaaactca agtaaaaatc
      181 cattttaact ttgctgtatt tatatactat ataaatttta catgctatat atttacagtg
      241 gggcaagtgc ttgttatctt taaaaaaaca aagatcaaac atctctgaac aacacagctt
      301 gtataaacca gacagattat tcagatgaac tgtatttaat acaggttccc cactcatctc
      361 ctgatgcagg accagtgaaa aataagtgca tcacagtttg atagcattta ataataaaaa
      421 taaaaatcac agtatgaatt tgtctgtaaa aaacagacaa ctgagactta agacaaatga
      481 cagtatatta agaaaatgta atatggaaca atatacaaat agtcttgaga gatacattca
      541 ggactgcata tttgttgttt cacaatgtcg aaaaccagaa gattttcttc agatcttgaa
      601 tataactcaa atgtgaagta aattagtttc tagtgtca
//
LOCUS       KCPA01000772             603 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 84503tic ultra-conserved element locus
            uce-1618, sequence.
ACCESSION   KCPA01000772
VERSION     KCPA01000772.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 603)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 603)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="84503tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>603
                     /note="ultra-conserved element locus uce-1618"
BASE COUNT          186 a          105 c          116 g          196 t
ORIGIN      
        1 agtccaacat ttgcagttaa tattactata ttaacaaaaa ataaagggct ttggttcctc
       61 acactgacct gctctcctac ttaaacgttt ttggagagca aatatgatct aaagaaatgt
      121 tttgttctgt cttttattca cagtggaaca tgcttgaatt ttacagatct ccaccaaaaa
      181 aaaagtttgt gaatagttgg tgaaagaagc ctaaggaaaa tgtgtaccta atcctattaa
      241 ctgacttaat ttagaattat taaaagcctt gatacacagg atttaacaca atctttctag
      301 cagggtgtga tgtaatctat ttttgttcct cagctagcag atggcttacc tttaagtaat
      361 ttccaatatg ttaggagatc aaaagccatc cttatgccat ggaggcagta atcgtttctc
      421 tctgctgggg gttgcttggt actgtggata tgcaaaagct gctggcattt ccaagcatag
      481 aaggccgaca tttcttcaga ctttgaagtt aataatcctt cagaagttga aaaactgaga
      541 gaccctttta atgttctata cggcgtgtgc taaagtaaat atctgtgagt aatcactgtg
      601 ggc
//
LOCUS       KCPA01000773             697 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 84613tic ultra-conserved element locus
            uce-1878, sequence.
ACCESSION   KCPA01000773
VERSION     KCPA01000773.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 697)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 697)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..697
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="84613tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>697
                     /note="ultra-conserved element locus uce-1878"
BASE COUNT          201 a          162 c          154 g          180 t
ORIGIN      
        1 cgctggagct agctttagag gaagagagtc cctgccaagc tggaaagcag tcatgaagtt
       61 acttgagaaa taaggcccta cagtgggact ggttgtgtag ctaatccatt agtcttttca
      121 aaaggacttt gctctacgcc cttatggcta aattgaccca acaacctatc aatgccttta
      181 tttgctgagt ggttgtccat gaaaggtctc cgtgctggat ccaagctgta atcaaagcct
      241 ccatcagtac cagggccctg atgacacaaa tggccaaact ttcaacgagg ctggctggtt
      301 tccagccaca ccattttaaa gatacaaaga ggctgtgttg tgctgtggaa ttcattttct
      361 tgtttacttc ctacagaaac aagagcataa tcagcactca gtgcatcgga tcagaccgct
      421 gagttgttga cagaagcttg gagaggcttg ccagctttcc acatgaaaca ctggctttct
      481 tctaatacac cccccaccgt ctgtggccct gccaattgta gcacatcaga gcaaccattg
      541 agataatgac cgtgaagtct catgatacac tttgatgaag tgtaacattt ttttttgtct
      601 gtgccaaaat gatagagaca gctgactaaa aatcacccca tcaaaatcaa ggctgatgaa
      661 cagcaggcaa agacatgtgc ttccacagag aaaaggg
//
LOCUS       KCPA01000774             722 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 84723tic ultra-conserved element locus
            uce-2431, sequence.
ACCESSION   KCPA01000774
VERSION     KCPA01000774.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 722)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 722)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..722
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="84723tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>722
                     /note="ultra-conserved element locus uce-2431"
BASE COUNT          242 a          134 c          139 g          207 t
ORIGIN      
        1 agacagtgga ttcctttata tcctaggaaa aggcacaatg gaaaaaatgg gccctgccct
       61 ttcacaaaac atctagctga catgtagctt actaaaagag tgtagattta aagaaaggct
      121 aagcagaaat gtacatcaag tgccattatt ttatcaccca ctttaatcac aggctgctct
      181 tcaggatggt ttgggatgct ggttgttaca gaagagattt ctgtaccatt attagtacct
      241 ctgaacaaat gcagtgagca tgggaaaaaa agacaggaga gtgagagtga gaaggaaaat
      301 gtagcagcag ttaaagcata gtttaataac tccaatctca gtcacttttt tcatatgcat
      361 tgtatgtgca agtccatagt acagcataat gtgtcataat ttggcctgca attctgacag
      421 cactgcttga cttgggcatt aaatcattgc cccgaggaat tcacattctg gcaattcctg
      481 atggtagggc tgtcatctcc tcccacacat gacctatcat ttttgacatg attgaatcaa
      541 aattagtcag tacatttaga tgtaaattag agacatccaa gaataataat gagcacaaaa
      601 atatagctct gtgtaactga cacggcaaca gcttagtaca gtcttccaca gtgtcctcaa
      661 aattattaat atcacgataa cagaagtact gtatcaaaaa agtgtgaaaa cttttctttt
      721 tt
//
LOCUS       KCPA01000775             594 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 84832tic ultra-conserved element locus
            uce-7782, sequence.
ACCESSION   KCPA01000775
VERSION     KCPA01000775.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 594)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 594)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="84832tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>594
                     /note="ultra-conserved element locus uce-7782"
BASE COUNT          206 a          117 c           95 g          176 t
ORIGIN      
        1 aataataatg ctactttcta aaaagacaag acaaaaagca cactcacaca taatggtaaa
       61 ctgaatttat ttccttttgg aaaacaattc cagtaatctc caggttcaga ccgcagagta
      121 aacattaata acagtaacat acaggttagt tcaactgatt caagaatttg gccgtgtgaa
      181 atcattaagg aaagtcttga acactcaaag cttcaaatgg tatccaggaa aaaaattctt
      241 tgacaaacta cataacaact attgcatata tggtaatgct atctgtcata tcgcaaggct
      301 tacaaatata tatacgggcc ttattcaact gtgggttcct gctctgtgag aaagagtctc
      361 ttcatatttt ttgcaagaat cttcagcaat aaaaaatagt cttagattca tccgtttgta
      421 taccaaaaga gagatttcta gactgaaggt taaacgaaag ggaggccaaa cagagctgca
      481 atggaacata gctattacct tctccctcct ccttgcccct cacacagtat tattattatt
      541 tgtatctttc ctgaataggg cccaagtcca cttgtcttta taagaccatt ttag
//
LOCUS       KCPA01000776             847 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 84938tic ultra-conserved element locus
            uce-1611, sequence.
ACCESSION   KCPA01000776
VERSION     KCPA01000776.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 847)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 847)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..847
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="84938tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>847
                     /note="ultra-conserved element locus uce-1611"
BASE COUNT          289 a          155 c          124 g          279 t
ORIGIN      
        1 attttagagc aaatactgct accaaaagcg ctgccagagt ctgcattgca caactccaga
       61 cagcatcttt cacaaaacaa ttatattttt tctagatgtt gtgaaagcct tgaaaaaagt
      121 ttacttgatg tctaaccaag caatgctgta tcttcagatt tgaaggagag ctcagaaagt
      181 tagtttttta ttattcttca tttaagtatt attttttaat tgcagcgtat taaacataaa
      241 atctggtaca atctttaaaa ataaatagga cctaactata aatgggccct gttgtgtttt
      301 tatctttgac aagcaagtaa ttgcttctca aatttatcag tttgtttatg caaaaaccat
      361 ttaccaagcc tagctcaaaa gcatcaattt catcattatc atcttattaa tttagccaag
      421 ctataacaca gctgattatt cctgagtaat atcctctgca gcacatcatg tgtggcaaaa
      481 ccatctgtac agtacctatt taataaataa accctcggct aaatgtctct gtttattgag
      541 aactaatgtt tatagaaaat ataatggaac tcaataaata actcagcttc atcaacctgc
      601 atatgaatca gtatgaagaa cgctgacatc atcacctttc aagtaccaga gaaagcaaaa
      661 ttacccaaaa gagctataga gtcaatatta aggcattaaa actgcaatga aggcatatta
      721 atgcttaaaa cttcattgtt ggcagtagaa ttgccaccac ggacatattt tataactcta
      781 agaatactta ggctttatga ctgtttcttt gttgagtgcc ttgcacttaa tgtagttttc
      841 cacttta
//
LOCUS       KCPA01000777             770 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 85050tic ultra-conserved element locus
            uce-7864, sequence.
ACCESSION   KCPA01000777
VERSION     KCPA01000777.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 770)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 770)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..770
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="85050tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>770
                     /note="ultra-conserved element locus uce-7864"
BASE COUNT          249 a          126 c          189 g          206 t
ORIGIN      
        1 atgcgctttg agcaactttc aaaataaatg aaatgtttta ttaattctaa cagcttaata
       61 tacagaacta atagaggtgt agtccatttt gtcttctcct atagtgcatt aatttcttta
      121 taccgacaga ttgcatggct atgtttgtat gacaccactc agatcaattc tatggcctct
      181 gaactaaaga aaatcatctt tctaaatgga atactaattt tagctaagct gcttctgaag
      241 actatgctct ttagcaaagt tccatacaaa aggtagggag aagagggaga gtgtagctga
      301 tgaaatgcaa atgaggcttt tctcagacag ctggctgctt tgggatgaca tgtgtgatga
      361 atggctctta aaacatgagc aggcatcaag ctccaattca gtgtcagact ggcacaaaca
      421 gcagcattac tggatgcttc ctttaattaa tgcaacactt ctgcattagt ccggacactg
      481 ccgataaatg gggaagaacc gatatcagtg gtaatatcag aaatctttca accttgaagc
      541 tgggatgcat tagccgaaag ctgcggtatc gtaaaaggtt taattgtatt tgtaatgtac
      601 cagtgcacca tgacaaaaat gggagatagt gtaggcagga cagagtaagc cagtgataaa
      661 tgagtgtgag tgagcgatta taaagcaggg gggagtgtgg aaacagacaa tagacagcgg
      721 agaggaaggg gggaatgggg gactctaatg tgaaaagcag gtaacgggag
//
LOCUS       KCPA01000778             591 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 85160tic ultra-conserved element locus
            uce-2416, sequence.
ACCESSION   KCPA01000778
VERSION     KCPA01000778.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 591)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 591)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="85160tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>591
                     /note="ultra-conserved element locus uce-2416"
BASE COUNT          183 a           95 c          125 g          188 t
ORIGIN      
        1 cagtagaaat ttgttccttt aaggtccaag aatgatgcag taagggcaaa gctcttccgt
       61 gggcattttg gagccttccc ccacaccagg aatttactga gggaataaag gtgagcaatg
      121 cacagacctg aaagtcacag acactcaggt tcatctgttt ggtcctgtta tgacagaaat
      181 cattacgagt ttgatagatt tatttataaa gacttgcttc aatatttaaa gtacatctat
      241 tccaacattc ctcatttcaa gctcggctgt ggatcaagat gaaagaaaaa ttaaattgta
      301 tattgaagag ctgttaattg aactgcactg catttagcaa gggagcatca gcttcaggca
      361 gtcaatacta cagagaattt ttaatgtact gtatcactag attgtcagtt tgtattggag
      421 aatgcaaaca gactgcttca actgatgata aagccctgga aacttctaag ttgttgaggg
      481 gagaaaatgt tattttgctt tgatatattg tgacaaagtt gttggttgaa gcaggaacaa
      541 cggtgattat tatttgaata tcgaattctg attgctttca ttcttttagt g
//
LOCUS       KCPA01000779             534 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 85273tic ultra-conserved element locus
            uce-2312, sequence.
ACCESSION   KCPA01000779
VERSION     KCPA01000779.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 534)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 534)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="85273tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>534
                     /note="ultra-conserved element locus uce-2312"
BASE COUNT          173 a           98 c           94 g          169 t
ORIGIN      
        1 cttcacagct gcagtctaat agctacatga caaagacttc acaagaacca aactatgtag
       61 caatgaatta acattcatgc tttagggcat ttactgcatt ctacatattg gcagaaaatt
      121 atactgttaa aaggttaggt agattgaacc tacattttaa actggttctt aagtgttcga
      181 tttttttaac aaattggtta cttaattcta ccaagataca aaacataagg ctgtaagtaa
      241 ctaatagttg tgtttaggct attacagtgc aggtaatcct agacacactg cttcactgct
      301 gcttgcattc tgctgggttt tgatccttct gttgggaaat accagtttag agaagtcagt
      361 atttaaaaga acgatccata ttgataagca tgcttttccc ttgcactagt tgtctagaca
      421 gcactactgc agcaatattt tattctggct ttgttagcac atcaggatac aatccagaac
      481 aaaaacctgt tcagaactaa gtgtggagaa gtactctcaa agacaatata actg
//
LOCUS       KCPA01000780             752 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 85384tic ultra-conserved element locus
            uce-6706, sequence.
ACCESSION   KCPA01000780
VERSION     KCPA01000780.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 752)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 752)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..752
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="85384tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>752
                     /note="ultra-conserved element locus uce-6706"
BASE COUNT          228 a          127 c          149 g          248 t
ORIGIN      
        1 atatggaagt aaaaccaatt caaattaaaa tatcaagaat gtaaaaactt aacatgggat
       61 caacaggtct tctggtgacc ctttcagatg gaacctgtta cataattcca ttcttgagct
      121 tttcctaaag cacttgggag cataagtgta ttttgattaa gtaggatggg acttttgcta
      181 atcagttctt tgacactgca aagtgctttc atagcctgca gcatctgcct tccaaacttt
      241 gcttgctggt agattgttct gcagtttgtt tagcagcagc attctcgaat tctaatgtat
      301 gaaaaattga tgattaactt cttacctcct ttaggcacat agagatgaaa tccagcgtaa
      361 atttgaagcc cttcgtaata gctgcacagt gagtattaaa tacagatcat tgaattattt
      421 tgaaattaag gataatgaaa caaacaattt cctcatttaa tccttgatga cactagttcc
      481 taatgtggac ttctggcttc aaggtgctag taggagctgg atggattgga ttggatttct
      541 tttaggtttc agcagttttg aggttttagt ctgatcatga aattgtcact gttcttcttt
      601 ttggagaaga aagcaaatta aaatatctca ttgcagtgca gctaataaga atggtgtagc
      661 agctgaaaat tactgtaggt gaagatcttt tctgctcaca agaagaaaag atctacctgt
      721 ccaaatcctg agctgcattg tagatctagg cc
//
LOCUS       KCPA01000781             499 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 85489tic ultra-conserved element locus
            uce-4721, sequence.
ACCESSION   KCPA01000781
VERSION     KCPA01000781.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 499)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 499)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..499
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="85489tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>499
                     /note="ultra-conserved element locus uce-4721"
BASE COUNT          129 a          114 c          120 g          136 t
ORIGIN      
        1 ttccctgcag aggagtacgt cacctgtcac acgtgccgct ccccggacac catcctgcag
       61 aaggacacca ggttatactt cctgcagtgc gagacctgcc actcccgctg ctccgtggcc
      121 agcatcaaaa caggcttcca ggctgtcaca ggcaagaggg cacagctccg tgccaaggct
      181 aactaggttt gctaatcaac actggagaaa gtgttctggg gatttgcaat cggagtggat
      241 tttaaagcaa ggttgtaaaa acgacattgg tctgtgaaat ccttgcaaga tgcagatcct
      301 caagctgttc acatacattt gctcattgaa tatattttac caactgtaag gagcgtggtg
      361 ggaaaggagg tgctttttaa tccgttcaga cttctgtaaa acacgagata aattaaagat
      421 actataacag tgagtgtctt tggatttttc cttcagtttc ctcaatggtt ggtgtgttgt
      481 tctgcagatt atgtcactg
//
LOCUS       KCPA01000782             631 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 85594tic ultra-conserved element locus
            uce-454, sequence.
ACCESSION   KCPA01000782
VERSION     KCPA01000782.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 631)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 631)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="85594tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>631
                     /note="ultra-conserved element locus uce-454"
BASE COUNT          216 a          109 c          115 g          191 t
ORIGIN      
        1 tgccaaatta aagcaggaat tcataatagg gtgcaaaaaa aggataaaag aacgaaaaga
       61 gaatgaaagc ttcttagctt ggtatttctt taatttcacg taaatttcac taagtaaata
      121 tgccttaaaa gtgaataaaa ttttatttca ctttaacaag agagtataaa agttaaaaag
      181 gtcactgtag taatagacta atctcaatta ccagggcagc cggtgaaacc cacaactccc
      241 acctaatctc attcggtgca cacgcagtgc accgtttgat ttccaacacg gctaaatgaa
      301 attataaagc agtgttaaat ttattaatca tttaattagc taaatgttcc tgcaactact
      361 cgtgagatga atggcatgtc attttctaat gcaatttgcc tctcagccag gcagggtcag
      421 gagggaagct actggcatct taaatgatct tttttatatt gcaccttcta ttaagggaca
      481 gtgtgatatc gctgattata tttgagtctt gtacacaagg ccagggagtt ttcttgttat
      541 aataacaggt tatatttaaa ccaaaataaa gatggtaaga tccgaagagc gaacaattaa
      601 cccatctgtg actgtatttc tcactttggc t
//
LOCUS       KCPA01000783             607 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 85705tic ultra-conserved element locus
            uce-4527, sequence.
ACCESSION   KCPA01000783
VERSION     KCPA01000783.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 607)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 607)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="85705tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>607
                     /note="ultra-conserved element locus uce-4527"
BASE COUNT          130 a          171 c          121 g          185 t
ORIGIN      
        1 ctgaaatatg ctgggcctct cccccttcca cctttaagaa aggagaaaac ctaagtgggg
       61 atggccacat gatagctctg caaaaaatcc ttcctttcct ctgagtgcaa tgaagttaca
      121 aaaacagcac cttaatcctg tttctctctt tcttctccct tcactccatg cccctgttat
      181 tcatttttta ctcatccacc cttttctgtc tccatgggac actgttttgt gcgctgtggg
      241 ctcctggctc ggcacacagc tcaccctttc tttctccaat caggatggcg gcctagtgga
      301 agagcccact acttcaccat ttttgccttc accaagcctg aagctccccc tttcaaacag
      361 tgcactccct aatcagaccc tgggcgggat tgcctcaggg ctgggcatgc aaaacttgaa
      421 ttcttctaga caggtaaggc tgttggggaa gatctcaatt tcgctctctt ggagtagctg
      481 cagctttgtt catgtgaatt tcaccttaca ggacattgta tttagcctgc aaccctccag
      541 aagagatgtg gatttatacc cctgaaccct ggtgtggctc tgccttcatt tttttttgag
      601 gcattgc
//
LOCUS       KCPA01000784             718 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 85813tic ultra-conserved element locus
            uce-6718, sequence.
ACCESSION   KCPA01000784
VERSION     KCPA01000784.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 718)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 718)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..718
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="85813tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>718
                     /note="ultra-conserved element locus uce-6718"
BASE COUNT          218 a          130 c          143 g          227 t
ORIGIN      
        1 agcttttaaa aatattgcac gtgcagatca gcaggagcgg gaggaaaaat cattccttta
       61 tccacggcgc agatttcgag taattcaggg gaggcaaata cgacacgatc aataaagcag
      121 ctctgtgcct tccacactca cggcctcctc atgaatctta accaagagaa ataataataa
      181 gtgacagaga agggttctgg tactttaaat aagcaagtga gccttctaaa gctacgagca
      241 acattctctg gatatcaaaa ataataactg gttgtgcagc agtgcagcat ggaaacacaa
      301 gggtataaga tatactgtac tttaagctct gtttgatgaa tctgagcaca gttcctgggg
      361 gatagattac tttaaaccat gctcttttac tttctaatcc tgacttgatt tgatttgtac
      421 tttaatacag ctgcctggca attcaacagc aaatagagac tatttatgta atcatattgt
      481 aagtagtggg acaagaagaa actctctaga acctttttgg aaaatagttt gttgtacttt
      541 tttatttatt gaacagcagg gcttcgggct tttcagtgct cattataatt ggttttctgc
      601 ttgaactttc aaaaactgtc atgtcaatac tcaaacagaa tttttttgct tactatatgg
      661 ctgtgggctc tattttctca tgtgctactt ggcaaagttc ttgtaatatc ttagaggc
//
LOCUS       KCPA01000785             375 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 85918tic ultra-conserved element locus
            uce-2794, sequence.
ACCESSION   KCPA01000785
VERSION     KCPA01000785.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 375)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 375)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="85918tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>375
                     /note="ultra-conserved element locus uce-2794"
BASE COUNT          128 a           59 c           51 g          137 t
ORIGIN      
        1 aatagttttg aaagatgaat ttgaccagtt atattacttg tttaaaatat aacgaagaca
       61 cctggaatta taacatcctt tgcacagtga atgtcatatt atttttttgg tgattacgtc
      121 agtttagtat ttcacgtatt attaataatt cctcattaca taaaattatt actaaactgg
      181 caattaagtg aatgtgaagg atccatatgc tgaagtgttt gtaacatttc aattatgaac
      241 ctcacatcag atgtcttccg gagtacatca ataacattaa tgaacaattt ttgccaaaac
      301 cacacaaatg cgttccatta tcttgttata ttttcacaga gccttgtacg tcttcataaa
      361 tatttagata ttaac
//
LOCUS       KCPA01000786             619 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 86027tic ultra-conserved element locus
            uce-6970, sequence.
ACCESSION   KCPA01000786
VERSION     KCPA01000786.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 619)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 619)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="86027tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>619
                     /note="ultra-conserved element locus uce-6970"
BASE COUNT          185 a          122 c          134 g          178 t
ORIGIN      
        1 agcagctgca ggtggtatta aatcccattg gtctcagtgg attgcagtct aagctgttat
       61 tgtaggccag ggcattaaag cctagctctt aaagtaaggc agtgttcttc ctgtttgttt
      121 tctctccgtt atttagaaga gcttcatctt tttcagcttg tagcactcct ccagtcaaca
      181 tgaaagtgca gcctgtgaac aggacagcgc tactggtgac ctggaaccaa ccagaaacca
      241 tttaccaccc tccgatcatg aactacatga tctcatacag ctggactaaa aatgaagatg
      301 aaaaggagaa gactttcacc aaggatagtg acaaggacct ggtaaaagca cagcatcaac
      361 cccagacata tgtatcaagt tatccttttt tcttggtaga aggaggtaaa ggaggaaagc
      421 ttaccttata ggcctacaat gaattgctat ttaaatgttc agcattagta aacactggaa
      481 atttatagtt tatgtgattg cataaaggac tgaatctgca gacacttttt catgtagtgt
      541 tgctgagaag cagctggctc aggaaatggt gaggctcatt tggcttgtgt tcaacttaca
      601 gattttcaca ttaaaagtc
//
LOCUS       KCPA01000787             795 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 86135tic ultra-conserved element locus
            uce-3139, sequence.
ACCESSION   KCPA01000787
VERSION     KCPA01000787.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 795)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 795)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..795
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="86135tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>795
                     /note="ultra-conserved element locus uce-3139"
BASE COUNT          211 a          148 c          189 g          247 t
ORIGIN      
        1 tgatgctaac aattttcttt tctttgtgaa agccaacttt ctctgtctcc ctggtccttt
       61 agctctcacc ctcaatggaa acaattattt tgttgagttt gaaatgtgtg tttgtgttga
      121 ttgttgcaat gcaacaatgc tggtaacaat atttctatct ttccctttag gtctggatag
      181 atgcagggac acaaatcttc ttctcatatg caatctgctt aggagcaatg acttccctgg
      241 ggagctacaa caagtacaaa tacaactgct ataggcaagt ttccatccaa gggggtttag
      301 tgttttagct aaatgatgta aataaagtag ggacaatggg ttaatttttt tttaattaac
      361 ttgctccatg acatatgtgt gacttaggga ctgtttgctg ctgggatgcc tgaacagtgg
      421 taccagtttt gtgtctggct tcgcaatttt ttccgtcctg ggcttcatgg cacaagagca
      481 aggggtgaac attgctgatg tggcagagtc aggtacgatg gtgttggtgg cagtggtggt
      541 gggcactgcc gcccagcgtg tgagcaaagt tctgcagacc caatcagcta acatctaagt
      601 gataaaacag aacaagattt cccataattg ccagaaaata agcacgttgt ctagagcagt
      661 gagggttagt cggggttgta cgtcttgatt aacagggcag caaacacatt tcctagagtg
      721 tgctaaacca tttgagttga gattagagct aagacaccat tatccagggt ccagaatgtc
      781 attgattcaa gaatt
//
LOCUS       KCPA01000788             514 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 86239tic ultra-conserved element locus
            uce-344, sequence.
ACCESSION   KCPA01000788
VERSION     KCPA01000788.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 514)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 514)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="86239tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>514
                     /note="ultra-conserved element locus uce-344"
BASE COUNT          166 a           82 c           84 g          182 t
ORIGIN      
        1 tgttgctaac cactctttaa ataaaaatac aacatgattc taatatgcca aggagctcca
       61 cggataacca tataatttca aaatgatact gattttgttt atatgcaaca taatctttta
      121 cagttcttag tctttatttg aagcattgca aagtggattt ttatgaaagg tattataaaa
      181 gacttcttgt tttttcataa cagatttgaa cattaactga tcagagttca gataaatagt
      241 ctttactctc cattaaaata ttaaaaagcc tttggtagga aactggcgta aagatccttc
      301 attcttgttt aatgaacact tgttggcaag tataacactt taatagcttt gcagaatgaa
      361 ttttgtgtga gcatcctcca tttcattgtc agacacttgt ccaggtgctg ggaatttatt
      421 gggagaagca tatttttact cattagttct gtatttgatt acagaacagt aaaatatgaa
      481 ccactaagtc cccgaggcat agctgtgtac attg
//
LOCUS       KCPA01000789             527 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 86351tic ultra-conserved element locus
            uce-6871, sequence.
ACCESSION   KCPA01000789
VERSION     KCPA01000789.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 527)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 527)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="86351tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>527
                     /note="ultra-conserved element locus uce-6871"
BASE COUNT          134 a          132 c          133 g          128 t
ORIGIN      
        1 ccttctaggt tgtttctgct ttcctcctcc tcctttctct gctccccaac ccatgtgtaa
       61 aagtagcagg ggggccttta ttaaaggcaa agccccacgg cagcagcttc ccagccaaac
      121 tgctcttgta ttactttttg atgagttttc aatttaggcc tttgcagaca gggggaagaa
      181 ggcgacttga gagacagagg ggggaaaaaa atgcaacaga tggggccgat tgtgctctct
      241 aggcaaatta aggaagacat ctgtagctcc caaatactgg tggtctaaag caattagtcc
      301 cctgtgaaaa ggggcctctc tgagcctcct ccagccaatc cgcgccccgg cagcactcac
      361 gttacaatgg ccttgaccac aattcactga gccaaaaaaa agaaagatta atccaggagg
      421 agctgtgcgg ccaggctgga gttgctaggc ttaaaaggga aggcgtttct gcctgagttt
      481 ggagcagaaa agcggggctt tttatcctcc tttctgatgg tcaccca
//
LOCUS       KCPA01000790             739 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 86461tic ultra-conserved element locus
            uce-3520, sequence.
ACCESSION   KCPA01000790
VERSION     KCPA01000790.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 739)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 739)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..739
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="86461tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>739
                     /note="ultra-conserved element locus uce-3520"
BASE COUNT          245 a          126 c          117 g          251 t
ORIGIN      
        1 tatattctcc tgtgattatg tagttgtttt atttcagaat ccctttctcc attactctga
       61 ttttaaaata tgtgcatcta ttaagaatta aagttaaata attaacaact ttaatttctt
      121 cagcagtgcg tggtattttc cttggtgctt tccatgcaaa ctagatacat gtagtatttt
      181 attgtcaaaa taatgtttca agtagtaaaa tggcaaggga atactgactg agctattaat
      241 aaaacacacc agcttttagc tggcaaagca gccttctttc catcaaatat gtctcagcct
      301 ttaataaaga aactcaagtg gtgtaggtga aaaattactt ttctcacccg gtcatctgtc
      361 tgtcatgtat tattcaggtc accaatgttt gtcctgaact gtatcattct gtagttgtgt
      421 caggtatgaa atatgttcag tgtaattcca tcagacttca cgaagttgat tagaacagat
      481 cacctttcgg catgggcaca agttatctca gcagattgaa tgaaaaagac ttatttatct
      541 ctgcctgata ataaagaaag agatgagcaa atttatccat taacttgaaa cgagtcccat
      601 attttgtatg aaaacaaact aaaggcagta attctattga aaatacttta atacatgaat
      661 gcttcttcga aaacatgttt acgtttaaaa ccagaaaatg taaaccttga gccacatgca
      721 ttataacaag ctttaaaat
//
LOCUS       KCPA01000791             801 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 86575tic ultra-conserved element locus
            uce-6872, sequence.
ACCESSION   KCPA01000791
VERSION     KCPA01000791.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 801)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 801)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..801
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="86575tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>801
                     /note="ultra-conserved element locus uce-6872"
BASE COUNT          292 a          149 c          140 g          220 t
ORIGIN      
        1 agggcaaatg gagtattgtt atcaccacac ataaaccaga agtacttcct tttctttccc
       61 caaaagaagg acttcagatg taagaatcac taaagggatg ggtctgaaat caagacttca
      121 cacatacaca aaaggcactg acataatatc agattacata aaaatgcaca tccttttaat
      181 ctcctgtaca taatgtgctt acttttaaaa tacaaaatct gccccagatg gctaataatg
      241 cccatttgaa aaaacacaac accacaatat taaagggcta aaatatgctg tgaacagatt
      301 gagaggcagt tcatcctaga ggagagtaaa aaagtgcaga tgggtgtcaa aaatagccaa
      361 gtgtcagatc tgttcaagta tctccattct ggcacatgct cccagtcaca gctgttagtg
      421 tattctctgt atccaagtgc aaggttttct aacactcaga gctgacatta aaacacactt
      481 cttgcttgct actgctttaa gagaatgctg caaataaaag atttatttaa tagtaaagct
      541 taacattgat aaggatatac atacttgagt gtgacacgtg ccattttgat taaagatgca
      601 tgaaatttta accagcaggt agattaagta atttaaatgc caaaggctta ataggttttc
      661 aaaaacatcc actctaggca ttccaacatt tgccaatagc cccaaataat gcaagaactg
      721 ataagattgt gtcattttag tatgagaaga tgagtttcat acaaacataa gggaaacatc
      781 agtggatgta aattacgcac a
//
LOCUS       KCPA01000792             694 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 86686tic ultra-conserved element locus
            uce-241, sequence.
ACCESSION   KCPA01000792
VERSION     KCPA01000792.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 694)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 694)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..694
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="86686tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>694
                     /note="ultra-conserved element locus uce-241"
BASE COUNT          210 a          113 c           95 g          276 t
ORIGIN      
        1 aaaattccaa gcccaccaac ttaaaatacg catgcagaaa ctcatactca attctaatta
       61 acaaagctta cctttctctt gaccatagag gtcatcatgt aaactattta aattgatagt
      121 aatattatgc agcatgaaat taattttaca ttgtatacag tttttattgt gactttatct
      181 tgtttcaaaa gtgcttactt tctgattttg tggatattac tgactggatt acttttattt
      241 tggtttttac acaacagtta tattagaaat ttgctgtttt attcttacct tcttagtaaa
      301 aatcctttta tcacacaatg ggtaatttat atccattacc agccctttca atccttttca
      361 gtggtgctgt cagtgccttt ggcacagtaa tgattaatgt gatctaataa tagtgtgcca
      421 ttatattacc ttagtaaaac atgtaccaac atcctattca gatctaccaa attcatagct
      481 tcctataata tttttgttga aagacaggat tactattttt caaagcggaa tttttttttt
      541 ttgcctttaa catatttaat gaaattcaca attctttgcc atggtaatct tcgtgcatgc
      601 atttgggctt gatgggtgaa ttttatatca ttctgcatta ttatgatttg ttaggcaaat
      661 tgtttgacat gtaaagaaag atatgcatta catt
//
LOCUS       KCPA01000793             352 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 86790tic ultra-conserved element locus
            uce-3514, sequence.
ACCESSION   KCPA01000793
VERSION     KCPA01000793.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 352)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 352)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="86790tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>352
                     /note="ultra-conserved element locus uce-3514"
BASE COUNT           95 a           69 c           69 g          119 t
ORIGIN      
        1 cttccccttt tgaatgttgc tgaaagttct ttccaagctc caataacagg ccactacaat
       61 ataactggct gggcttggct gccaatctat aatgttcttg gccatgatta atctgataaa
      121 taataaatat atcaatctag tcttttagac aaggacaaat tcttaccagc ggggaggcac
      181 gaggcctctt ttacagctgc ctgtagtgct ggaattaatt atttaatgct taattcttca
      241 ggaaatgaga aagttttgat taatgttgtc cagtgtcatt tcttgcttgt ttgatatgtg
      301 tcagataatt tttcctcggc agtcgctctc aagaagccag aggctactgt ca
//
LOCUS       KCPA01000794             542 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 86902tic ultra-conserved element locus
            uce-6070, sequence.
ACCESSION   KCPA01000794
VERSION     KCPA01000794.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 542)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 542)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="86902tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>542
                     /note="ultra-conserved element locus uce-6070"
BASE COUNT          177 a          100 c          109 g          156 t
ORIGIN      
        1 ttttacccag gcacaattcc agcaacagtt gcttttgact tacagcattg taacaaagag
       61 taaggacttt ttatttatta aaatggacaa ttgcatcgac tttaataacc cttacctcaa
      121 agttcacttg aaagaaaact agtaagactt tttattgaga gaaaaaaaaa aagtttagct
      181 atggtcagcc agggtgggaa attccattgt ggctgcaagc ccatggcagg tagagtggaa
      241 tttaatgaag gaaactgctg tgtttttgtg tctttctgta tgtttttcct ttaaaaccaa
      301 gagctgggca ggcttcccat ttgacctgat gtgacccaag caaattgctt cttatataaa
      361 aacaactgca gacttggaga atgtgaaaat gcactgtatc ctttttccaa ctcagggaaa
      421 atgaaagcct gagaaacagg acggccctgt caatactcgt tgagcaaaac tatcactcaa
      481 gccctataaa gagagattag aacaggcttc cttatgccag agggattcat tataagttag
      541 at
//
LOCUS       KCPA01000795             764 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 87015tic ultra-conserved element locus
            uce-6520, sequence.
ACCESSION   KCPA01000795
VERSION     KCPA01000795.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 764)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 764)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..764
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="87015tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>764
                     /note="ultra-conserved element locus uce-6520"
BASE COUNT          229 a          153 c          147 g          235 t
ORIGIN      
        1 ttcttttact ctgttaaatt cagacataat ttaggatgga aaaatgcatt ttagaattac
       61 acctgcagca tgtagtatta gtatgacttt ttcatggcat gacagtgatg tttctacaat
      121 ctatacatat tgatttaggc tgataataaa caatttgatt aggctctatc tataggctgt
      181 catttcaatc actgtcactg ttccaataga gtggaaggca gatagcagac acatatggca
      241 agatttctca aaataaaaac tctggcctga ttagagccct aggttcagtg aattggacaa
      301 gacagctcag ctgccaggtt attaactccc tcagaaaata ctctgccttt tccccggggc
      361 cagcctgaat attctgatct ggatcgataa gcaatctccg gtgtgtacaa aatgccagct
      421 agaatcattt gtctcagtgc agtctcctta caaaggataa aacacctgca gtatacggcc
      481 ttctccccct ccttttttaa ctaatgaccc acaaagaggg aagaagtaac tgaatctgtt
      541 ccatcatcag gaaggctctc tcaggtttgt tttaatgatc acaacggcta cctttcaatc
      601 ttacaaaaat tatatcagtc atggtttccc tgtggcatgt ttatgtaagt aatgtgatcc
      661 acaatgtaat gacaagtgta cagatgtcat tgtaagaggg cccttggcaa gaagatatct
      721 cagaatgtca gaattttaat aaaccgtggg tagggttctc tttg
//
LOCUS       KCPA01000796             587 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 87122tic ultra-conserved element locus
            uce-4661, sequence.
ACCESSION   KCPA01000796
VERSION     KCPA01000796.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 587)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 587)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..587
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="87122tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>587
                     /note="ultra-conserved element locus uce-4661"
BASE COUNT          197 a          108 c          104 g          178 t
ORIGIN      
        1 tatcacccaa aaaaaagcag cgaaatggag gcatgcgaaa ttcacccaac tcctcaccca
       61 aactgatgag gtaagactgt aagaaagtca tatcttcatc tcctcctctc ctaaaaataa
      121 ggggaaaaaa aaagattgtt agatggtttc tgaaaggctg aagtatttat tctgtcagct
      181 tgtcagcagt taatgataga gctgaaaaaa aattctgtca tgaaaaacag tttgaaaagc
      241 tgtttgaaaa atacataggc tttaaagtct tagctgtcac cctgtcctgt ccatgtgtag
      301 ttcttaaaca gcagtggcac taatgatagc actaaccaat caggggaact catgtggtta
      361 gtttgcctca ggcaattctc tttttgttgg attccctctg agtactgttt tctgtactta
      421 aggccatatg tgagatgtat catcacaatc aaaaatgaac ctgaatatta ccttcctttt
      481 atcctgtcga ttgaaatcaa atttctgtta attgatttag actgatgaaa aagtctaata
      541 atatatgtac ttgccaaagc aaagttcaaa actaacacag ttttagt
//
LOCUS       KCPA01000797             581 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 87231tic ultra-conserved element locus
            uce-1018, sequence.
ACCESSION   KCPA01000797
VERSION     KCPA01000797.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 581)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 581)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="87231tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>581
                     /note="ultra-conserved element locus uce-1018"
BASE COUNT          202 a           72 c          117 g          190 t
ORIGIN      
        1 tcaatgatca agaggagtaa aaaggacatt ccacacacat aaaatatgta attaaaatga
       61 tgaattattg taagatagaa tattagcctt ttgacatttt aatctgagca ggagagagtg
      121 agagagtgca tttggagccg ctcaattaaa tttagaattt tcccctccat tgttatgaat
      181 aaatagaaag attctgtagc agtctgtgga attattaatt gcaagtactg tagaaggtgc
      241 atgcaccata tcatgaaatg gagtatcatt gttagtgact atatttcttg gtaattaagg
      301 cccagactaa tgatgcaagt tttcttcagc atgattttca tctgattatg aggctgcttc
      361 attaagagca ctcagactaa cgagctgtag ctgtaataaa gtaattttct gtcttgtgct
      421 ctgattgata aagagtttct atagctaaaa ggaattgaaa atataattat aattagaaat
      481 ggttgaataa agttattaca ggattgctga agggtagtgc aattgacacc ataatgtttt
      541 ttggaagtgt gcatcttaaa attagacttt ataaaaggaa g
//
LOCUS       KCPA01000798             684 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 87340tic ultra-conserved element locus
            uce-7357, sequence.
ACCESSION   KCPA01000798
VERSION     KCPA01000798.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 684)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 684)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="87340tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>684
                     /note="ultra-conserved element locus uce-7357"
BASE COUNT          220 a          112 c          113 g          239 t
ORIGIN      
        1 aatcaaccat ttgcagctgt gcagtgagtc ttccattcca agttcttcag cctttttaat
       61 ttttatcggt cttggtttat tcatgacata tttatgacca gtgggattga gatgaaatgt
      121 acatacatga aaaaaatcat tgctatactg tttttttttt ttcttttaat gatatttcat
      181 tccaacaagc tctttctatc tagacgctta attagatatt taaatgattg gagcaatgct
      241 gtttctttaa ctcctaactg caacaaacac atacgaaaca cactgttggc ggcatttaat
      301 caacagcagt caatttatca ttttcacagt tttagtgagt ggttatgaat cactaaaatc
      361 acaggtactg tagatgcagc gttgtggcac tatcattaac aaatatacag tgcacagagg
      421 gatgacttgg taattgagtg ggactaataa gaatacatta tttagctgta tgtgacaaac
      481 tgtgcctcaa aacacaacca tggaaaattc acgttttgct taataaataa attacacagc
      541 caatgtatta tacataattt gtgtcctcat ggatttgaat gatatataat gcatactcca
      601 agtcatttat ttattaagac taactatata tattgtaggt ggggaatttt aaactctaga
      661 gtaagacctg cataggtaac tgtt
//
LOCUS       KCPA01000799             447 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 87446tic ultra-conserved element locus
            uce-7904, sequence.
ACCESSION   KCPA01000799
VERSION     KCPA01000799.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 447)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 447)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="87446tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>447
                     /note="ultra-conserved element locus uce-7904"
BASE COUNT          151 a           68 c           76 g          152 t
ORIGIN      
        1 tctgtgggca gtttaaaaat gtccatcagt gcatgacgca cctttacttt cacacgtctg
       61 ctgtttacta aataacattt cagcacagtt ttcatcaaag tgtttgaaac ttggaataag
      121 tgcacttaat taaaggaagg ctgtgaaaat gtgcactaat ctgatatgac taatagcaaa
      181 gtgcatgaaa ttgctaatta gaatttcatt aaaggtgctg ctttatcaga ctgcgaatat
      241 cacaaccttt aaaattcttt caggaaagct taattccttt tcaaacagaa atattcttta
      301 aagacatttg atttgttctg aaggaatttg tagcttaggc tgaaacataa aatgttgcca
      361 gtattccacg ggagtaatat ttgaataaaa atatgtatca ggtactttct ttcatcaggc
      421 agatgaataa tttttttgaa aatatta
//
LOCUS       KCPA01000800             696 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 87556tic ultra-conserved element locus
            uce-6992, sequence.
ACCESSION   KCPA01000800
VERSION     KCPA01000800.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 696)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 696)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..696
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="87556tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>696
                     /note="ultra-conserved element locus uce-6992"
BASE COUNT          219 a          146 c          134 g          197 t
ORIGIN      
        1 aatttactca tgaataaatc aggccaaagt caggttttgc tccagttttt cagcataaag
       61 gcccagacta aaagagggac cggtgcaaac agtgcctctg tatgttgcgt tgatcttcag
      121 tgcgaattgg tttaacacta acgatacacg gcacacaaaa actcatacgg gctgaacatt
      181 gcaaggctgc caatttaatt tgaaatgact tgacagaaaa tctctaggcc accaaatgct
      241 attataaagc actgtattct cattaaaggt ctgagcccct ccctgagggc aggctcctct
      301 tgaggctgtc cctctggcat aacatgtgat agagctaatc tgtcttcact tggacagcat
      361 tgcggatatg caaacccagg tggcactaat aggtttacag taataactat ggaattggat
      421 acagtatgtt acactgtgag aaattcccac agatcaattt ttgtggtgaa ggttaaccaa
      481 cagacacaga gccataatat tcccttttca tgggtctgtt aacaatttta tggttttctc
      541 tcccatattt ggacagaata taaatattta acttttcaaa catatctaca atatatgtgc
      601 attctcttgg aaacacaact tctgttgaca gttattccaa cacaaacctg gaggaattcc
      661 attggcttca aagaaagata ccaagcgaga gcagaa
//
LOCUS       KCPA01000801             738 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 87664tic ultra-conserved element locus
            uce-1194, sequence.
ACCESSION   KCPA01000801
VERSION     KCPA01000801.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 738)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 738)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..738
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="87664tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>738
                     /note="ultra-conserved element locus uce-1194"
BASE COUNT          208 a          174 c          153 g          203 t
ORIGIN      
        1 ccgagtgaaa gagcagagtc tcagcaccgg tgacccgaga aacctcattg ctccacttat
       61 actggcacaa tgtcatgttc tcagccactc catcaccagc aaggggaaaa aaaaagcttt
      121 tcctttcctt ttagtcaaag gcagtgggta agcagagcac gcggttcaga gggtcattaa
      181 aaagcatcaa aggaggcagc ctcatgatgg taataagacg gctgcaagga aataaagtgg
      241 gcattgatct gcactatcga gtgtgacatt ttaaccgaag ctaaaagcca agagcagatc
      301 tagccctctt attcatctgc ctgcctgttt tagtaaattg tctttttttt cctccaacca
      361 gtggcctcag aggtcacttc atattagctg gcttgttaat accgaggcaa tcaatactta
      421 atcaacaagt aatgggattt tgcagtcatc ctgtatgatc tttcaataaa gccccgaatc
      481 tatctcagcc cattcagagc ctgactaaag gtgcacgatt gctgcagagc agggatttga
      541 tggtctgatg ctcttaggct gatctgcatc tgattaagac accatgcagc cactgtcctt
      601 cacccttttg ttcctttatc cccgtataat gtagcatggc acagaaattc gtcatcttag
      661 cttttagatg caacagcaaa ggaattaata tttccttagt gcatcatgat ccagcctctt
      721 ggtcatgata tgcaacca
//
LOCUS       KCPA01000802             606 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 87773tic ultra-conserved element locus
            uce-6426, sequence.
ACCESSION   KCPA01000802
VERSION     KCPA01000802.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 606)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 606)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="87773tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>606
                     /note="ultra-conserved element locus uce-6426"
BASE COUNT          120 a          190 c          135 g          161 t
ORIGIN      
        1 aggagatgca aggagagcac tcggacaaag tccttaggct gtgaggcccc caaagagagc
       61 gctccaaaac gcagcgagtc ggagccagac tctgacagaa aggggcgagt ttgctccgcc
      121 gagcaagacg tggcttttgg ctacaagcaa aaagctggca aaggcggaac actcttttcc
      181 ttctccttgc aacttccaga gtcatttcct tccctcctgg atgacgatgg ctacctgtcg
      241 ctccctaacc tctccgaaac caacctcctg cctgccagtg tgcagcacta cctccccatc
      301 cgctccccct ccctcgtgcc ttgcttcctc ttcatttttt tctttctgct ctctgcctct
      361 ttctcagtgc catacgccct cactctctcc tttcctctgg ctatgtgcct ctgctacctg
      421 gagcccaagg cggcctcctt gagtgcctca cttgccaatg acctgagtga cagttcagag
      481 gaagaggtgt gtacctcggc atcgaacaca ctctttttcg tgttcagtgc ttcagtccta
      541 accagtgtta gatagtagtc ctactttcag agcctcattt ctgtctgtgc tgatatgtta
      601 gaaggg
//
LOCUS       KCPA01000803             677 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 87882tic ultra-conserved element locus
            uce-3356, sequence.
ACCESSION   KCPA01000803
VERSION     KCPA01000803.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 677)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 677)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..677
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="87882tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>677
                     /note="ultra-conserved element locus uce-3356"
BASE COUNT          213 a          120 c          136 g          208 t
ORIGIN      
        1 cactctgcga gtaattgtct gcacagcagt gacagatgtg caatatagca gcttcttcag
       61 gaaaaaatta acagtttgtc cagcatgtca gctcgctctt tttagtgctt cggaggtctt
      121 ggccccatta tggatgattt agaaattgag gcaagctaag accagctgcc tgggttgaaa
      181 gccttagtta gtagccctca tctgcattcc agtattcact tacatctaga aattggtagg
      241 gcccctctgg ccacaagatg agtatgggct gacaatgcct tgatttgttg agagagagaa
      301 taaatgggtt tttcagaaga tgaggaaata tcaccattac tggccaattt acagcatttt
      361 atctgttctt caaacatgtc acttttgtta ttgttgcatg gtaattacat agtgaaacgg
      421 aaagaaaaca aattctggtt acatattcag atggattgca aaatcatata atcctgataa
      481 atgcccattt atgatacaca cggatgaaag gttcatttta attttgaata gctagcacag
      541 ccataaatag gatataggat tagatcccac agaatctgat tacctaaaag caaatagtat
      601 ttttcttcgc ttcataatca ggaaattcag tatgtgcagg gtatttaaat aagcaggttt
      661 tccactaaaa tatatga
//
LOCUS       KCPA01000804             639 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 87994tic ultra-conserved element locus
            uce-1868, sequence.
ACCESSION   KCPA01000804
VERSION     KCPA01000804.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 639)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 639)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..639
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="87994tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>639
                     /note="ultra-conserved element locus uce-1868"
BASE COUNT          192 a          124 c          126 g          197 t
ORIGIN      
        1 ataaatgtca tgggttgtta acaagcacgg tgtcaagcag ggcaaaatgt aattctgtat
       61 ttttttaatt actggaatta acagaatatg gcactaattt ctacagctac cgcttctccc
      121 cctccctgaa cacgaagctt gatttgtgtt cttattaact ttgtcctata aatgaccttg
      181 caaggagagt ggttctggag gctaagtgaa acaatgtcta tattttctga agcttcaggc
      241 taagttttat taatgtaatg tctaagatct ttgaagttgt gactttacca ggaaaatcat
      301 aatctccaaa cctttattca taatgggtat gacttccagg gggaacagaa tacctgctgt
      361 gctaattatt tcaattatca gctgctacta aaacacgtaa tggattttct ctgcttccac
      421 aggtaaaagg catgacatta tggaacttaa ctctgatgtt gtgaacttga tctcccacgc
      481 tacagaggag agattacgag ggcttctaga aaaactaact gtaattgctc ggcacagagt
      541 atcaacccac aaggtaaagg aaatcattag caagttttgc acaaagtttt cctgcattgc
      601 agccttgaag gtcctcttcc aagtgtgggc acatcacag
//
LOCUS       KCPA01000805             816 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 88104tic ultra-conserved element locus
            uce-5382, sequence.
ACCESSION   KCPA01000805
VERSION     KCPA01000805.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 816)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 816)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..816
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="88104tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>816
                     /note="ultra-conserved element locus uce-5382"
BASE COUNT          250 a          130 c          165 g          271 t
ORIGIN      
        1 tttggataat aaatatggtg tgggtagcta acattttatg aatgcagtaa tgtgttttta
       61 tttctactgg ttcaaaacag catttgcttc ttgaaattaa atggaatctg attgaggttt
      121 gtcctttcag agccttgtct ggtacaaggt aatgcattga ctaccctatt gatattgtaa
      181 tttttctatt atacatagaa attctcatat tgcaagttgc tgggaccctt gatatttcac
      241 aaatttggga ccattaagaa tgttttccat gtcagagcta tactaattgt gactgtgttg
      301 atgacatcca ccattctact taaattgaaa attgctgctt actaaagaag ttggaccctg
      361 agcttaagtc cttggtgact gatttgatta gtccatttga gtgagaatag ggcaacacag
      421 gggctatgtt aatggaactt aaacaatagg ccatcactaa tcagagacct caaggttgaa
      481 gtgaggttaa ttgttatgcg ggtggtattt gaaaagaagt gttgactggt gtaatgcact
      541 atgggactgt aacatttgaa catgcagccc taaggccaga ggttttgttt agtttcccaa
      601 tgaaatttaa agctacatta tgtacatctc taaacaacag cctatatttt tgatacatca
      661 caagagcaac agctaattga taacagaaat gagcccctag gcacaaaatt cagatccaaa
      721 tctggtattg gattttaatc cctttctaaa cttggtgatg tgggaattga ttgagtcttg
      781 attaagccct tcatgaaatg cacatagaag attcaa
//
LOCUS       KCPA01000806             667 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 88209tic ultra-conserved element locus
            uce-5716, sequence.
ACCESSION   KCPA01000806
VERSION     KCPA01000806.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 667)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 667)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..667
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="88209tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>667
                     /note="ultra-conserved element locus uce-5716"
BASE COUNT          198 a           83 c          142 g          244 t
ORIGIN      
        1 gtgtgccata taagacttta attttctgag cttaatagag tatttaaatg tctgtgcaag
       61 caagagagta tattctttgt gccttgtatt ttgtagagct atcagtataa gctggtaaag
      121 tttcgtatga agaaaaccct gaggggagct gtacagatgg tgagatttta ggttttaatg
      181 tatttgttcc atttttgaat gtatatagga atatgttgaa aatgtagata tatgccacag
      241 agtctatgta ttgtataaaa gatggctcta gaatttcggt actttggccg gaagaaaaca
      301 aatacttgca cattaatgcg attgtttatt tttgtaccaa agacaaatgc aactgatatg
      361 gcgaactgcc agtctaagta aagttttgca cagcttatat gatactgtac tgaatgtaaa
      421 aacaaaagaa aggtcagggt tagggatctt actgaactgt gaattttttt gtttgggtcc
      481 aattatctac agaaggagca ttcatacata acaatattat tttgctgttc ttgtagttcg
      541 cttccatggt agataagttg gtggccgtct tggagtcttt ttttttctct gcacttactg
      601 taggagattt taatatattt ggattttagt aagctattgg taaaatagtt ttcgactttg
      661 agaattt
//
LOCUS       KCPA01000807             723 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 88319tic ultra-conserved element locus
            uce-3907, sequence.
ACCESSION   KCPA01000807
VERSION     KCPA01000807.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 723)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 723)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..723
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="88319tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>723
                     /note="ultra-conserved element locus uce-3907"
BASE COUNT          203 a          135 c          114 g          271 t
ORIGIN      
        1 ctatattcag gaaagggaat ttcatgcatg accatctgaa gcacaacata ttccacacca
       61 tttagaacta tctcaggttc tcttttccta ttaatcactt ctacttaatt taaaatttac
      121 cagataacca ctgagaaata ttccagttta aatatttgac ttgagttgct catctttttt
      181 ttaatgacca actttttata tgggtataaa acagtgttta aaatgtattt tgttccctct
      241 ttctgaatag acttccacta ttatttttta ccaactagtt tcattgaaag gtttccagca
      301 ttacaggtaa tgtaaagtcc attaggtcag gctcttcata gcatgacatg cagtaaatta
      361 caagtgcttc aagcagctca gtgaattaca gttcatcact ttgaaaggtt cccactacaa
      421 gactacagat atcagatctg gcagttagga tccaattaac actttggtcg gaataatcag
      481 attgcgtgtg taagacttgt ataattcgtt tattgcttcc atgcatcttc tgtctgtagg
      541 taaatttgtt gctgttattt caaagcttgg aatcagtatt tcacttgcct ttaggttata
      601 tttcaagtcc ttttgcagtg caatgatgaa ctctccctgt tccaccaatt tagatcactt
      661 gtcccataga tattactgct tgagaaatgg tttgtttctg gtagttttgt tttgtattct
      721 tac
//
LOCUS       KCPA01000808             678 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 88427tic ultra-conserved element locus
            uce-1435, sequence.
ACCESSION   KCPA01000808
VERSION     KCPA01000808.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 678)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 678)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..678
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="88427tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>678
                     /note="ultra-conserved element locus uce-1435"
BASE COUNT          201 a          107 c          122 g          248 t
ORIGIN      
        1 tccaatggaa agtggtttca ctactggtac agtatcagca ccgaagggtt ttattccagc
       61 aagcactgtg gttgagtgac atcacctcaa ttttttatta tccaaaatat ttcatttttc
      121 atattcttta tttataaagg aacaatgctg ctgtaaatac attttttatt tcattccatc
      181 accatgagat gcagttccct atttgttgaa ggggtatata agctttctaa tggtgtcttc
      241 agaaatttat aaaatgtaaa tactgatttt gatggtcctt aagatgtgtt taactgtgag
      301 actatttaac taatggtgtg gatgtgattt gtcatccagt attaagttct tagtcactga
      361 ttttgtgtac aaaataggaa agagggaaac tgcagctttt cattacagac tccttgaatt
      421 gccagctctc ttgagtttta gcaaactcta attatgcctc tggatagtac atcatgcatt
      481 tctctctggc tttaatttgc taaagctgtg cacatatgta aaaaaataga ttattttagg
      541 ggagatgtag ttctagaatt attgcttatg tcatttctta agcagttatg ctcttaatgc
      601 ttaaaagaag gctagcattg tttgcacaaa aagttggtga ccccccaaaa atagtaatga
      661 aattacttct gttcagta
//
LOCUS       KCPA01000809             622 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 88538tic ultra-conserved element locus
            uce-6230, sequence.
ACCESSION   KCPA01000809
VERSION     KCPA01000809.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 622)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 622)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="88538tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>622
                     /note="ultra-conserved element locus uce-6230"
BASE COUNT          161 a          135 c          181 g          145 t
ORIGIN      
        1 ggtgagggag gcggggtggg gtgggtctcc cgggcgctgg tggagtttat ggatgcggga
       61 ggtgcaccgc aggagaaagg cgacacgtcc cctttaaaag gaaatataat ttacagtgtg
      121 cagccaggcg ggccatagtt tcaatctcgt ttactataga gaaaactctg ctagctgttc
      181 tctatcccac aaatccgatt taatcagaca agccagccag cgtggcttga agtaaaaacg
      241 gataattagt aaacagagag ctacttcagt gcttcattgg cattcgagcc gggctagtgt
      301 gtcgcattta aaatgcagtc tgatgaagtt tacaaaatca aaccatttgt tactcctatt
      361 gaagaggctt caggccactt gcaattaaat tggaattagt gcttagaatg agatacagca
      421 aattcatact aaaaagggat ctgactttca gacatttgac ttcaagatgc tagagcacgc
      481 gtgtgtgtgc tggcctgccg gccccccaga gcccctggca gcacgcccag acctgctgtg
      541 tggctgggat ggagtgactc ggggatgctg tggcagcagg ggaaaaggga gcggtgccac
      601 tgctggtgag ctgagcccca gc
//
LOCUS       KCPA01000810             659 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 88645tic ultra-conserved element locus
            uce-7985, sequence.
ACCESSION   KCPA01000810
VERSION     KCPA01000810.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 659)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 659)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..659
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="88645tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>659
                     /note="ultra-conserved element locus uce-7985"
BASE COUNT          192 a          124 c          130 g          213 t
ORIGIN      
        1 acatggtatg taagagaagg gagactgttt ttgcatgaaa ctttgtagct tacaatactc
       61 cttctgtgag ggaatggcgt ccagtttggg actgacaggc agcctacaat ctttgtgcca
      121 gcacactaat cccttgtctg tgggttactg aaaaccttct tgcatttttg ttcccagttc
      181 accttggtgc ccaattccac atatgataaa tccagtgtct gcagaaaggc agtcacctaa
      241 ttgcacagtg aagcagaaga aagccttgca aatggtatac aattttcaaa gtgttccaag
      301 ccttaggcaa aagcctttca actatgtcta aaactgaatg ataaaatatg ttgtacaaat
      361 tatctgtgaa caggaaacat gtggtagtgg caggggactg aaatgtaaca cttgtaaaga
      421 aatgggaact gccagtcatt tatacccttt tacttttctc tcagtcacaa gttccatgat
      481 atttttttca ccatcagttg atgttcaagt ttataataag acatttatca gatctcacta
      541 ggccaattac agctttgtag cccccatatg aaactaaagg tttagttttg tcccttcttt
      601 tatagaattt cttttttatc attgcaagga tgtgtgtgga tggaattctg aaagagttt
//
LOCUS       KCPA01000811             699 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 88755tic ultra-conserved element locus
            uce-5441, sequence.
ACCESSION   KCPA01000811
VERSION     KCPA01000811.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 699)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 699)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..699
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="88755tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>699
                     /note="ultra-conserved element locus uce-5441"
BASE COUNT          171 a          205 c          142 g          181 t
ORIGIN      
        1 ggagccaact taccccgagt tacatcccat tcacgagcct gggctgcctc tgccgcccct
       61 cctctgcgcg cctgccgctg ctgctgcaga gaggccacat atgtctgcaa acacttctag
      121 gcagaaacca gccagtgcag aacaaagaca gccggggttg ccttcatctc agcacaaggc
      181 agccagtagc tattttcaag cttgttcgct ctccccctct gagggcaccc tgctctgttt
      241 ctcccctctt tgcctgtcca gctactgcac aacacacatc aattattcat tgcttgtctc
      301 ccggtttcca ggcaaaacca atcacagatg gagtcttgct aatgggctca tgccgtactt
      361 gccaacaggc tatttgtgct caagctacaa ccctctagag acaataaaga gaatcaggtt
      421 aagctttaaa acttcacacg tacgcgaaca gacctaaaac ggcgatagac atgtaagcat
      481 ccctatgaca ttgcttagga gtacgtcttc ggcatacagc atggcagaag gctgctgtaa
      541 atcttctgaa agggttttaa gaaaatcaaa cactcatctc acctcagctg catgttactg
      601 atattgatgg ttctcttttc tgtctctagt gctccatgtc ttgctttccc attacacaga
      661 gaggtatgtc cttctctcat tctggtgcac gcacgcaca
//
LOCUS       KCPA01000812             639 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 88865tic ultra-conserved element locus
            uce-1523, sequence.
ACCESSION   KCPA01000812
VERSION     KCPA01000812.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 639)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 639)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..639
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="88865tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>639
                     /note="ultra-conserved element locus uce-1523"
BASE COUNT          202 a          138 c          127 g          172 t
ORIGIN      
        1 ttaacaaaag aaaagtcaca attaaataag cattactctt aagaatgtct cattttcttc
       61 cttccttttg gcagttttct aggctgctgt agattgaaga aaatgggaat aagcatcttt
      121 cgaccacaaa cagatgtgct tgataaagaa aatgtcagca aaaatactaa agcaatgtgt
      181 cacagcagct ttctgacaga tagagggaaa aggtaaaaaa tgttctatca tgtccgacaa
      241 ggtgttcttt ttgagattta aagatcactg tgcaacttta aacatgtttg tcactttggc
      301 tctgactgca gctatctgga gcttcacaag aactttatca gctcagcata ggggggaaga
      361 aagaagccca ttcccattta tctcagccag gttcccttca aagccaacaa ataaattaca
      421 gtgtacattt gatacaaatt gatttcttaa ctcaaataac aatgttgtcc tcccagtcag
      481 gccatgtgtc actcattcgc gagcctgagt gaaaggctca atctgtctgc atgacagaaa
      541 taggcctgac gcatctcacc gaggaatgct aataaccccg gcctggcccg ggcctttgtg
      601 ggcaagccgc gataaggaaa atcagcccgt cctgtcaaa
//
LOCUS       KCPA01000813             376 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 88976tic ultra-conserved element locus
            uce-5895, sequence.
ACCESSION   KCPA01000813
VERSION     KCPA01000813.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 376)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 376)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="88976tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>376
                     /note="ultra-conserved element locus uce-5895"
BASE COUNT          107 a           99 c           76 g           94 t
ORIGIN      
        1 gccattaagc cctaaagaaa ggtaatcaat tccaactaaa aagcacttct cctggaatga
       61 ctgcacttca aacccctggc tggctgccag ccccagacaa cagccatcaa tgtttctgac
      121 tagcacagga gcacaagggg ccatgcataa ttgactggaa gatgggctaa aactgtgccc
      181 aatcagtgtg tgatcaaaac cgtgtggaat attcagcgcc acttgattac accttgtcct
      241 cccgctctcc tcatgaaatc tcttcaaggt ccagagtact gtaataagat cattactgtc
      301 aagcgctacg aatcgcaggc aatgagtctt gggataggaa gtcatacttc acaagctcct
      361 ctggtcttcc tttttt
//
LOCUS       KCPA01000814             697 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 89088tic ultra-conserved element locus
            uce-843, sequence.
ACCESSION   KCPA01000814
VERSION     KCPA01000814.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 697)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 697)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..697
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="89088tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>697
                     /note="ultra-conserved element locus uce-843"
BASE COUNT          186 a          169 c          162 g          180 t
ORIGIN      
        1 ccgccccagc tggtgtggag cagagcctgg tgacctccca gtgcgtcggg gagagcatgc
       61 agtgctgctc ggagcaaggc tcagtgcagc tgggagcacc ctggctgccc aacaacatct
      121 cggaaaattg ttcggctggc gcgggattgg atggagccga cacatacccc gagagagagc
      181 ttccaccaga gcagagcagc caaacggtca cggtagactt ctgtcaggaa atgactgata
      241 aatgtacaac agatgaacaa cctaggaaag attacaccta gtgactcgta accttaacgt
      301 tacaccggtc aggtgttctt cagtcagcca gtggcagtgc tcatttgttg tctagaagaa
      361 cgtatttggt gcacactaca gtggtcttag cagcaatact gtttttaagt attccctcct
      421 ctctacaagc aggagttctc ttcacaatgg tgctatccct tgctcaggca gggaacgaag
      481 cagtggcaac actgtctgtt tttgtatgtt gatttcaatc ttaacaggga tggacataac
      541 acctctgagg acccaaccgc agcttttttc tcagtggccc atgtcacaaa accctaactc
      601 aggaatttcc tctgaatgtt caatttttca ttgaagacag cttctttaca catcaaagtt
      661 ttatagctaa actgtacata ttatatataa tatatat
//
LOCUS       KCPA01000815             593 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 89196tic ultra-conserved element locus
            uce-3105, sequence.
ACCESSION   KCPA01000815
VERSION     KCPA01000815.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 593)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 593)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..593
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="89196tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>593
                     /note="ultra-conserved element locus uce-3105"
BASE COUNT          169 a          112 c          132 g          180 t
ORIGIN      
        1 tgagtggcct gaaaacttaa ctgctgtttt atttgagata aacctagctc ttcttcttgt
       61 gtgactaaca gatggattca tccactatgt cacgttaaag gaataattaa aagcttcatt
      121 tacatgcaat atgaaatatc ctgaaaagat gtgctgtgat tgtaactttg gattgttttg
      181 gttttctata ataaatgacc ctccaaatag tggctggcca gaggcatgca agaagcaatc
      241 catagtatat ggatttgctc aatggcattt aaaggaccct gattaaaatt cagcccaggc
      301 tggagtgatg agaagactgt ttactgaggg ctgtttgaag tcgtacattg cactgcagac
      361 agaccagagg gatgcacaga ttgaaacgtt ttaccttgcc tgtctgcatc cggctgtcag
      421 gagccgatgg cactctaaca ttcttgagag gtctgactgc tgctgcttat gagtcttaat
      481 tttcattgga ggcggcacaa gctcagcatt ggagatcaca gcaataacga caaacttcct
      541 agctggatct gtgttgacta ctacagatgc tacatttaga tattcgattt taa
//
LOCUS       KCPA01000816             343 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 89301tic ultra-conserved element locus
            uce-6913, sequence.
ACCESSION   KCPA01000816
VERSION     KCPA01000816.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 343)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 343)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="89301tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>343
                     /note="ultra-conserved element locus uce-6913"
BASE COUNT          100 a           81 c           61 g          101 t
ORIGIN      
        1 caggaatcct ttatctagat aaatatatcc tacaaatctt gaaagaaaac aaacattctc
       61 ctgaaagcag actgtaaaac agttgctttc cagaacttca tcctcttgta atggttccag
      121 ctctgctaag ctccctgcta caatatctca gcttgttcta tttgatggct gttcccctgt
      181 catcactcat tttcagtggg caagggggag caattgctgg gcatcaaatc atcatcaaat
      241 aaaccagcct tgacactagt taaaaaggga gatggatggt cagttggctt ctgcagaaaa
      301 tattctccta agcatcctat cccttgatac cagcctagtg ctt
//
LOCUS       KCPA01000817             682 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 89409tic ultra-conserved element locus
            uce-1860, sequence.
ACCESSION   KCPA01000817
VERSION     KCPA01000817.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 682)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 682)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..682
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="89409tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>682
                     /note="ultra-conserved element locus uce-1860"
BASE COUNT          190 a          133 c          124 g          235 t
ORIGIN      
        1 aaagaaaggc taactgtcca aagaggtcca tgctcactct aattaaaatt ggcttaggtg
       61 gcacaacctt cataattcag actatggcta tgaaggatat gcatgttgaa agcgctcttt
      121 gctcattagt gctatttctg tcagacactg ctacctgctc ttttcttaat gaatgctaag
      181 ccatctcttt agaagattgt gctgcttccc tgaactgagg gaactgtctt atttcctccc
      241 aagttcgttg agagtaaaat cggggagtca cctctttgac atttcccaac ctctgtactt
      301 atttatctct ttgagaccct gcgctccaga gatatcactg tcttaattaa gaagaaggat
      361 gtgaccatgg taaattgact gattccattg attaaggact agctgtacaa gtaacattga
      421 ttttaacagt gggtctacat aaatgtaatt gttcgaacat ggggctgcat aattatggtg
      481 atgtacgaga atagttggtt tgtccttttc aaccttcact aacattcttt tgcatggtaa
      541 tgtacctcgt tcaattagca gaaatcttaa atgttacaaa atgtcttttg tgaaggcaca
      601 cagtaatcat tatagtctaa tttaatctaa cagcattaga cagatacatc tctttctttt
      661 cctttctttg tttctagact tt
//
LOCUS       KCPA01000818             723 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 89524tic ultra-conserved element locus
            uce-7522, sequence.
ACCESSION   KCPA01000818
VERSION     KCPA01000818.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 723)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 723)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..723
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="89524tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>723
                     /note="ultra-conserved element locus uce-7522"
BASE COUNT          190 a          164 c          144 g          225 t
ORIGIN      
        1 tacagccata ttttctcttg atgagtttct gtcctgtcac tcactttagt tgtactaata
       61 ccaggaaagc ctgttgtatg ctaaatttga agttcttcaa caacttctat ttgtacctaa
      121 aatgggctaa acaccaattt tgctggtttt cctccttttc agttgccaag cgtgccaaaa
      181 gagaaaatat ggcttccata atttttttct ttagataaac ctcaaggtct tgcagcaaaa
      241 tttctttact tgatgtgcta caagtgatct aggctctatt gtagaatttt ttttccaaca
      301 tgcttcttcc cttgcaacag gtaccgtttt gcagagattc gctaccatcg ccctgaggag
      361 acccacaagg ggcgtacggt tccagctcat gtggagacag tggttttatt tttcccggat
      421 gtttggcatt gccttcccac ccgctcagag tgggaaaccc tctcccgagg atacaagcag
      481 cagctggtcg agaagcttca gggtgaacgc aaggaggctg atggagaaca ggcactgaac
      541 gctaatccct ttttctattt ctgcttctca caggcacagg aacacaggca caccacatac
      601 tacacaacat acatacatag gaggaacata actggtaaca atgactggta aaccagcttt
      661 cagcagtgta gtgaatgttg ctttttattt ttatttcagc tagttcacta actttaagtg
      721 tgt
//
LOCUS       KCPA01000819             661 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 89636tic ultra-conserved element locus
            uce-3115, sequence.
ACCESSION   KCPA01000819
VERSION     KCPA01000819.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 661)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 661)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..661
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="89636tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>661
                     /note="ultra-conserved element locus uce-3115"
BASE COUNT          201 a          106 c          126 g          228 t
ORIGIN      
        1 gtgggaggga aggtgaagca tttgagtgaa ataagtctgt aaaatattaa aggaagcaaa
       61 taaactggca aattaataaa tcaggaaaac atggaagagg aggattaaga acttgccaat
      121 aagacaaaaa ctgtccactt tggtcaccta gtgccagatt gctatagcat gctccttttt
      181 ccctttctat ttcagcctct tattaactct gctgtctgtg tctttccagt tcctgtggag
      241 tggtgttgtc aattgtgttc ttgttggtag ttttttttca ctattctgct tctgtaactg
      301 atctcctaat ttgctgtttt gaactcagcc tttgtcggaa ttatgggtaa cacaagatca
      361 tacaaactgc tagactggaa tagtttcaat tcaggtattt tattagtcat tcagtactac
      421 atatgctgac agaaattatg gcagctcagt gaagttatta gaaatgctct aagatattta
      481 ggtttaatca tcaaatgcct aaatgtcatg ttttcatgtt gttaacaact ttctttaaaa
      541 ttacaaacca taaaatattg ctaagaataa tttaatatca atctggaaag ctgaatgttc
      601 agatgtttca gctcagcata tttagggtaa gttccttaca cagttgggat catgtcaggt
      661 a
//
LOCUS       KCPA01000820             774 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 89750tic ultra-conserved element locus
            uce-729, sequence.
ACCESSION   KCPA01000820
VERSION     KCPA01000820.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 774)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 774)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..774
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="89750tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>774
                     /note="ultra-conserved element locus uce-729"
BASE COUNT          252 a          131 c          130 g          261 t
ORIGIN      
        1 cccttacatc acattttatc acagataatc caggaatatt gtttctctga gtaataaaat
       61 tgttctttag tgcatgacca gagtaaggga tattgtgtca tttagacatc acgtatagac
      121 aagaagatat aaatgagagt taataaccat caaatgtgtc tatttccttt tcctataaat
      181 tagagcatgc tttcctactg aattttgcaa gaaggaaaac agactccctc ctgctgatgt
      241 ggggaagcaa tgctaaatct ccctaaagat tcactctggc ttcttacagc tgtatgttag
      301 taccttttta tatgcaattt tacttcattt agtctttaag gttgtgcctg aggttagttt
      361 aaaaggttag ttaaatgtta atggatgtta atgctgcaat taaattgtta aatcaattga
      421 aaactgtggc tccatctcta tctgtgttag tgccggcctg agttgcattg gcgtataaat
      481 taaaagctgt aaatctagtg aagtctaatt agagaccaaa tttctcattt atcttatttt
      541 cacaggactg taagcactga tagataatca acgaagggct aaaacttttt aacattaaaa
      601 aactatttta tctatttcag gactcaggtg actgattata attcagatcc aattacagta
      661 aaaggtcata tgtgaaatga agttcttaca gacactacaa gttttatttt acaagtttgc
      721 atacactgct gcaccatcta catcccaagc aaaagtaaat acactgtacg agat
//
LOCUS       KCPA01000821             722 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 89861tic ultra-conserved element locus
            uce-614, sequence.
ACCESSION   KCPA01000821
VERSION     KCPA01000821.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 722)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 722)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..722
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="89861tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>722
                     /note="ultra-conserved element locus uce-614"
BASE COUNT          170 a          192 c          172 g          188 t
ORIGIN      
        1 cttgcagaat tgaacaagag ctgccaggat gccttcatag tcatttctct acaggtcatc
       61 cagtccctcc cgtgtcctgt cacttttcca ccacctcaaa catccacgtg tggctgagga
      121 gggccagcac cagcacttca cgacagataa ctctactgtc tacacaatct acagtgagga
      181 gcacacatgg gacgacctgc gggcatgtgg gtgtgcaggt ctgggggaag agtcccctca
      241 cacatcctcg tacgcaggtt acctcttgct tgtcatggtt acacttctcg cacatggccg
      301 gcgaggagta atgatggaag acggagcccg ataggttatc gatgatcatt aactccccgt
      361 cgaaggagtc cttaataatt aaagagacac tgtccagcca taagttctcc taggggacaa
      421 gaaggggggg aggatgggag agatcatttt aagaatgtcg agttttgctt tcaagtttca
      481 tgtgaatttg gggctgggtt ctccaccctg actcatctgg agcagcattc tgcaggtact
      541 tgcacagggt cactgcattt tctccacagg ttgtataaga tgccagagtt caatgaaaat
      601 aaggagggac agtcttcact cactttgctc acgtctccct tccagctctg ctggagtcac
      661 tcactctcga tctgccattt actcttctcc tgagctcccc tctcaaattt gctcctgtca
      721 ca
//
LOCUS       KCPA01000822             735 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 89973tic ultra-conserved element locus
            uce-599, sequence.
ACCESSION   KCPA01000822
VERSION     KCPA01000822.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 735)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 735)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..735
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="89973tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>735
                     /note="ultra-conserved element locus uce-599"
BASE COUNT          234 a          127 c          160 g          214 t
ORIGIN      
        1 agtttgcttt taggaagttg aagtatggca gcaagggtat cttgcaaacg tgaccatcca
       61 aaaagttacc agaattgccc tcaagggctg acctagttcc cagtactgtt ctgagagatt
      121 aaattgtgcc gggttggtca tttgaaaaaa gtactctgaa acaaatttgg acagcaggag
      181 agaggatggt gacaggagca cctgtccttg gaatcttatt tagaaaatgc agcaagattt
      241 taccttaacg gggtctttca ggcagaaaaa tatggcagta acatgtgtaa aggaaatttc
      301 aatatgtttt gacaatagtg taatctagag aaagtgttat ccctcttgtg gaggtcatca
      361 ttcttaatac agtgtgtgtc atcaattctc aggacaacag ggaaaatgat ctagtcaata
      421 catatgaaac agaaatcatg cataaacatg ctgcctcact ataaagtggg tgacaccagt
      481 gaaaattgga tagcaggcct ggatgcaatt ttccataact tcttattatt cataagatcg
      541 tgtgatctaa taagccacac ctcaaattac tgtccattga aggtactctt gagtgataga
      601 ttctgacaaa ccagacagag aatatattat gattaagatc tgatgccggt agtgctggac
      661 tctccagctg gtgttgttct ttcattttgt ttccaaaatg agggagcacg aatccctagt
      721 ttataaatgc ttaaa
//
LOCUS       KCPA01000823             607 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 90087tic ultra-conserved element locus
            uce-6743, sequence.
ACCESSION   KCPA01000823
VERSION     KCPA01000823.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 607)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 607)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="90087tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>607
                     /note="ultra-conserved element locus uce-6743"
BASE COUNT          175 a          156 c          118 g          158 t
ORIGIN      
        1 gccatacatg cttcagtgaa aagcagcagc acccgtgccc aacccactgt acagagttaa
       61 tgtcctgcaa tttttccctg atcctgagag tcagagggag tttccagctc cacttttcct
      121 agcagctgcc aacgttgtca gcactgatct gtcagaaagg atttttcctg gcaaaacttt
      181 gaagctcctt tctgacatcc ccaacaaact aattgttgtc tcctgcctct gagagccctc
      241 tgaagtccca acgagttagt gtcttctcaa gagatgagaa aggggactca caaaatcaat
      301 ttatcaggct attacgcatt gtcatcagcc aaaacaaaaa cctgctaaag acaggagaaa
      361 aagaaggaga aatgggtctc tgagaaaagg ttacagaaca tccatcttct ctcctcttcc
      421 aattgtttcc tttctttacc cattttcata cccatttccc tccgctaaaa gacactttat
      481 gacaagcatt gtaatctctt tagaccaggg gggaacctct tctttgggac caaatctttg
      541 caaggcgtga gtgacagcgg gaaggggtcc aattgccatc gaagacactc aggcaataaa
      601 tcatcca
//
LOCUS       KCPA01000824             395 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 90194tic ultra-conserved element locus
            uce-1268, sequence.
ACCESSION   KCPA01000824
VERSION     KCPA01000824.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 395)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 395)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="90194tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>395
                     /note="ultra-conserved element locus uce-1268"
BASE COUNT          121 a           61 c           80 g          133 t
ORIGIN      
        1 ttgggtaaaa ggatttaggt aagaatactt atgatatgct gtattttgcc taaaattcca
       61 gtgacctgtt ctgttttata tatgaaaggt acacattaaa agaatatgag ctagcaaata
      121 tctttactga agcactgttg gcagccgaga tcactgacaa cttcctggct gtgattcata
      181 atctatattg gtgcctttga gacagaaagc tattgatttt tcccagtcta taatccaaga
      241 ccatatacac agcttgttag acatctgtgg gaatataaac tgagttttga tacaatttag
      301 ggagtttctg ttagcagggc actttttgtc tttgtgagaa tctctacaca tctgtgtaat
      361 cttgaagaga aacagttaat tcaaaagagt ttggg
//
LOCUS       KCPA01000825             410 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 90296tic ultra-conserved element locus
            uce-5156, sequence.
ACCESSION   KCPA01000825
VERSION     KCPA01000825.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 410)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 410)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="90296tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>410
                     /note="ultra-conserved element locus uce-5156"
BASE COUNT          154 a           65 c           58 g          133 t
ORIGIN      
        1 tttaatcatg tctagtttca tagacaaaag taatcactaa aaagccagtg gctacaaaaa
       61 ctgcaaacaa aatgaacctt taaaagctaa tgacttaagg gtgattttac agacatataa
      121 agtatgttag gggcttacac tatttgtcat taacacatat tttgaaagct cggctaatat
      181 aatgtgacac aaaattagtc aaacacaatt catgcaatat tgtttaattt tactcctcat
      241 ttaacttggt tttaagcaaa atcattatgt cacatgataa cgttcacttg aacaagaaat
      301 attttataat ggtgtctgcg tttcgaaatg agttattagg agctacatgc tgaacacatt
      361 cttaactatg aaaactataa agctaatagc ttcatcatat tttgacaaca
//
LOCUS       KCPA01000826             428 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 90402tic ultra-conserved element locus
            uce-5595, sequence.
ACCESSION   KCPA01000826
VERSION     KCPA01000826.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 428)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 428)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="90402tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>428
                     /note="ultra-conserved element locus uce-5595"
BASE COUNT          141 a           90 c           59 g          138 t
ORIGIN      
        1 tttttgtgtc aaaacaatta gacacacata aaactggcag aaaacaccac ttttcaaagc
       61 tgtttttcac acccatgaaa gataaaaagg tgctcattag tgtatggggc attaccttgt
      121 aaggggtata acaactcagt aagacaaagt gaaaaatgag gtagataatg taacaataat
      181 aaattatctt gacattcact ttctttatgg tccttcaagg gtcattgttc ccaatttact
      241 aagagaacca catcatcaaa atttttcttc aattatcatt tttttcttcc tcctgcagta
      301 ctgcaaatag aacaactttc cttatgctag ccacaacact acatttccac cctttaactc
      361 agaggtttgt ctccatccaa ctaatcctga gaaaagtttt tgccatctgt ctgcttttac
      421 atgaaact
//
LOCUS       KCPA01000827             659 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 90504tic ultra-conserved element locus
            uce-4986, sequence.
ACCESSION   KCPA01000827
VERSION     KCPA01000827.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 659)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 659)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..659
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="90504tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>659
                     /note="ultra-conserved element locus uce-4986"
BASE COUNT          183 a          148 c          135 g          193 t
ORIGIN      
        1 cacccagcct ggccttgaac acttccaagg atgttcccgc tcatttcaga aggaggattt
       61 ttgcctttgc cttggagcaa ctgtgctctt tcttccaaga ctcacaccag ggccgcttct
      121 ctgcatgtgt ggtctcttgg actgcgagct cataaataaa taaggagaaa agttcttaat
      181 cttcattcga aagctcctgg tatcacaatg ctgctgcaca aaagccatct tattagcccc
      241 aagtgcaaaa tgctgccttt tcttgcagaa gctcattaat tgcaggtcac cattcaacaa
      301 gaaagatgag gcacttgagt tcttcaggct ctcattagcc accgagctga acagtatgtg
      361 tgaaattaac agtcacctga gtacctctat aatttcataa ttattaggcc taatgggtta
      421 gtctctgcca aatggtttta actccttcct agacagagct cacgagatgc caaggttggc
      481 gcaaaccatt taacagctta ataataataa ggagaggaag tttccaggat catgtactgt
      541 ttgcattttt taacatatgt ttagctttta attattcata tccagcgcgc caaggaagca
      601 gatagcctgt atcccagaga gtgggtgaaa gagctttctc tgcaaaggga ttttaattg
//
LOCUS       KCPA01000828             415 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 90606tic ultra-conserved element locus
            uce-694, sequence.
ACCESSION   KCPA01000828
VERSION     KCPA01000828.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 415)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 415)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..415
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="90606tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>415
                     /note="ultra-conserved element locus uce-694"
BASE COUNT          135 a           62 c           85 g          133 t
ORIGIN      
        1 gggcgcatga tttctttcat ctcaactaat tagagcttgg tatgcttatt aaaaaagaaa
       61 gtattaaaat acaaaatcat attactctgg tatcaagaag cagaatatta caatattcaa
      121 atgctaatca tataacttag cagatgactg cagaaagtag tgtatttgaa ctgagacata
      181 aattataaat tgtaaacagt gcatagggga tatgttataa ctgtgtctca tttaaattaa
      241 ggcaggaagt tttctctgaa gcagattatg tgccttcatt aagttttaaa gtatcttctg
      301 taatgtttta ttaagatcac ttggcacagt gtttcccaga ctggatgtta gcaatatgta
      361 ctggtggaag cggccgcagt ggtagaggtg gctcaggtgc attgctgcac tccac
//
LOCUS       KCPA01000829             542 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 90715tic ultra-conserved element locus
            uce-355, sequence.
ACCESSION   KCPA01000829
VERSION     KCPA01000829.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 542)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 542)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="90715tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>542
                     /note="ultra-conserved element locus uce-355"
BASE COUNT          189 a          111 c           92 g          150 t
ORIGIN      
        1 ttgtctgcag agggatatat gctgttttaa atccaaagga gtgcagacat agatggtggg
       61 taaaatctgt gaaccataag taaattctta taaggaacat acaaaaaaga ttgttcttca
      121 gtcagactta agccattact ttcttcaaaa gaagaaaaga cgcaagttaa gaaaaaggca
      181 ccgccaaaga ccttctgccc aaatgtgcat ctccatgaag tttcctgctg agtgcatatg
      241 aatgcacagc gatctgggaa aaggatccaa ataggatttc aaacatctaa aaattttaac
      301 tcaaacattt aggtatttca ccatgctgct attcattcat tcactgattt tttttgtctt
      361 agtttaaaga gatgctaaac aaaaggagaa gagctctaca tgtatttaca ttccaaaact
      421 aagctcccct taccaccccc ctagtctgtc atcccttcat agctaaacaa accgtaaagt
      481 ctagccctat gtccttgaag caaagtcaca aacacagtaa cagaaaagtt tggtctttca
      541 ag
//
LOCUS       KCPA01000830             630 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 90821tic ultra-conserved element locus
            uce-5923, sequence.
ACCESSION   KCPA01000830
VERSION     KCPA01000830.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 630)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 630)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..630
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="90821tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>630
                     /note="ultra-conserved element locus uce-5923"
BASE COUNT          197 a          109 c          106 g          218 t
ORIGIN      
        1 tggtgttgaa accctattct tgtcttctaa ctctctcctt atttgactag attcttttaa
       61 ctgaaagaca gtcccttcaa cagtaaatta tgaaaacttt aataaagagg aaagctactt
      121 agatatttaa atgtataaat cccgctcatc tgacatccat tgtctcagta acatcaggtt
      181 tacttgtttg gaatttcata tttccaaaca gaagagcatg taagagttct aattcaaagc
      241 atcaatcaca gagaatgaac ataacctaat gtcactgctg aatcaggcca tcaatttctt
      301 gctttgtaaa agcaatcagc aagctatcaa gcaataaagt gtatgggaaa agtgtttctt
      361 ttgagatagc acagccattg acaatgatat actgatggag aatagcagct atctcatagc
      421 atagtgtgcc tattagttgt taaaagctct gaattgttca acagatgtga aatatgtttc
      481 ttattattat ggatcaatct agtttgctta atagccttat atggcgctta gatttgctgt
      541 cttatttaat gaggttatat ttgcactctc tggctctttt gtttagttga ggtatgacct
      601 ttccactcag ttttccaaga aacaatgaat
//
LOCUS       KCPA01000831            1395 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 90934tic ultra-conserved element locus
            uce-1250, sequence.
ACCESSION   KCPA01000831
VERSION     KCPA01000831.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 1395)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1395)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1395
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="90934tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>1395
                     /note="ultra-conserved element locus uce-1250"
BASE COUNT          462 a          230 c          253 g          450 t
ORIGIN      
        1 gataaaacat gaaaaagtga gtgtgttaaa aaccatgggt cattgctctc aatataactg
       61 gtccagagat gaaaataaat gttgtcttga atgcttgtag catgatgaaa aatcattttg
      121 agaatcaaaa gaaagtgatg tcatacgaga aaactgtttg aacagataag atgcaagtgc
      181 ttatgccaac atctctgttt gttgctgagg tctctgcttt agagtattgg atggcaaagc
      241 atgtcaggat agctccaatc aaacagccca gcatcaactt caaactttaa gtgacataga
      301 attgtgacct ttcactaata aggtatacta aatgaactta gagagctgag tgtttctgtg
      361 aggctgtgga aaatagatat gagcgggttt agttccttta ctaaagttct gaagttaatc
      421 cctgctatac agtataattt aatgttttct gcctacaaca aaaatagcag ctgtccccct
      481 atttgaaata gcattcgcat gatcactaca tattcatatt cctatgcata cgttatcact
      541 taaaaggctt tctaattaca acaacaagac aaaaacttct tggattcttt ccagactcac
      601 taaatgataa aataagcttg tactctctcc ttcttaatct ccgtaaagca ccttggagcc
      661 tcatctccga aatacatgcg aatgaatgtg aaaatgccat ttagagatgc aggtgtgaca
      721 tttgataaga aacttctgga ttaaatatgt tctgctaatg aggatcccag ctacccccat
      781 cagggctaac tattggttgg attgtgtgtg agctgataac attccacatg cgaacattca
      841 aattcattat taataaacag cccaagtctc tatcagaaaa gtctggatcc tttagcaagt
      901 gagggatgtt gcttctcatt aggagaagac atcaaatctt ccagaattta gcaatttcat
      961 ttttggaacc aatttctaac agtgtattaa tggtgcattg aaaatctgaa caaagccttc
     1021 atacttttta ttcattttgt aaattacagt aatctaggaa ggtttgacta agctactgga
     1081 gcaatgggcg gtaaagacat tgtactgaag cattgcagtt ctaatgattt ttttatgatt
     1141 aaacgtttat gaggaaaaaa ttcatccttg gagaggaaaa ttaactttca gcttgtatgt
     1201 tcattatctt tgataccaaa gtgaaatgtg gtttcttgtt tttttttaaa cttgcagatg
     1261 ttaaaggaaa tgttaaaatg gagatatgat tcagcttatg ttttaaccaa ataaaaagct
     1321 tttaatttgc cattttatag ttaatattac aaatggccag acacgtcatg gtacaatttc
     1381 tgtattacaa agtaa
//
LOCUS       KCPA01000832             632 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 91045tic ultra-conserved element locus
            uce-2112, sequence.
ACCESSION   KCPA01000832
VERSION     KCPA01000832.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 632)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 632)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..632
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="91045tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>632
                     /note="ultra-conserved element locus uce-2112"
BASE COUNT          187 a          105 c          142 g          198 t
ORIGIN      
        1 taaaataaaa gttacaagtg ggtggtgagg ccttttggat gaggtctttc tgattctaag
       61 aaaagcagtg actcaaattt aataaaagta atatacctaa actattttaa tcttatttta
      121 gcttcctggc atgcaatatt tatatgtaga tgtagcagtt aaactcattt taatggatga
      181 atttttatgt aaaagtgatg ttctgtgctg caagcagcag gtgtgttttt aatctttaat
      241 aggtcacctt cctcagtgca agcaggcaag ctgttattga tcaaagaggt tttgttgggt
      301 agctctcaga ttattgagtg acaaacttta ttggatttga cttaacagaa gtcagaagac
      361 agctgaagca taagagcttg cactaccatc agagtcattt tacgacagcc agggagcaaa
      421 gctcagagat ggatactgag ctctttgctg gcccttggag attaactgaa cagccttcct
      481 accaattccc aagcctgtca gcagaaccaa ttagattttc aaccagtaga caagaagggt
      541 ggcacttggg gacctttttg ctttaggtca aaggcttttc agactgcgat gagatgacat
      601 tgatgatgac acgttgagca ttggttggtt tt
//
LOCUS       KCPA01000833             554 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 91156tic ultra-conserved element locus
            uce-6821, sequence.
ACCESSION   KCPA01000833
VERSION     KCPA01000833.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 554)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 554)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="91156tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>554
                     /note="ultra-conserved element locus uce-6821"
BASE COUNT          103 a          153 c          156 g          142 t
ORIGIN      
        1 ggtaaactca gactttgatt tatttccttt catctcgcct gcaagccctt gcccaaaggg
       61 agcaggagag cagaattaaa tgcctactcc tctcgttcgc ttcctcagga tgggaaggtt
      121 cagcgtccac tggatatggg acaagatcgc ttggcagccc ttgtggattc tccttcttct
      181 agaggcgaat tatagttatg gatttattgt cccggtgcag cacttccagc agcagcagca
      241 gctttctgac tctcttcggt gacgggtatt cttgggtgga taatacggat tacgttgtta
      301 ttgcttaaga atacgcgtag tcgaggagag taccggcggc gggcaggcag gcaggcagcg
      361 cgaccgcccc cagcccacca gctggctcct cacctcctct agttgccaag gtagcacctt
      421 ttccatcttt tcctacgctt tgcaatgttt catctgtgtc tctgcccggg cggggggctc
      481 gaacgccctg tctcttgcgg atgcgtggga gcaagccggc tgggagggcc gcggcagggc
      541 tggccaagct cctc
//
LOCUS       KCPA01000834             838 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 91268tic ultra-conserved element locus
            uce-734, sequence.
ACCESSION   KCPA01000834
VERSION     KCPA01000834.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 838)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 838)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..838
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="91268tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>838
                     /note="ultra-conserved element locus uce-734"
BASE COUNT          247 a          143 c          208 g          240 t
ORIGIN      
        1 tgcaaatctt tcactggaac ggcaaggatt ttaaaaataa attatgactg accagaatag
       61 aaacagtgtc tacagttgca aaagccatgg tcatgtaaca gacattattt aagccattta
      121 ggtgaaatgt atggatactg tatgtttagt ggcattgtta aaacagggtg tctgtacaaa
      181 tatttagctg tgagaattat aaaatcataa ggcgattaag ttagctagtt gtgaaattcc
      241 aatattgctt tttaaatgac ttcaggatat aggaggtgct aaggttatta tctgttatca
      301 ggaatacagc ggaattgtac gactggataa taactaaaca actgacacaa tgtaaaatta
      361 cattatcagt gtgttaaaac aaaattgcgc cctaaaggag tctacatgcc agctcagagc
      421 tgcagtgtaa ttatgcttaa ctctgataat taaaatacaa cggagatcaa cagaatcatt
      481 ttcattaaga aaattattaa tgatggtggt ataacagtaa ttgattgcag agcaccacag
      541 gataactctg tgcaggaaag ccaacatgtg taacgtgccg gtcgggttgc gttgtgtccc
      601 actgagcgtg ctgccggcca ggtggcagcc gtggggcacg tgctgcaaat cctaatttag
      661 agcgctctgc aggttgcccc ttggaggaac agggatgggt gccggtgcac gggatgaggg
      721 gtggggtcgg gtatggctgc cggtggctgc tgacagtgac tcgaacactt cctaagccag
      781 ccgtcgtctc agtttgtgtt tggttttgca tttccattag tgatttactg gtgttatt
//
LOCUS       KCPA01000835             612 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 91377tic ultra-conserved element locus
            uce-3582, sequence.
ACCESSION   KCPA01000835
VERSION     KCPA01000835.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 612)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 612)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="91377tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>612
                     /note="ultra-conserved element locus uce-3582"
BASE COUNT          182 a          121 c          134 g          175 t
ORIGIN      
        1 cagctccttg cagaaagact gaaacatgat gggcagagaa gggtattggt gtcggtaaga
       61 gaaaaatgat tgaagttgca tcatctgtat gattaaaatc actgtgtgaa ttttgatttc
      121 ctactttcag acatttgagg atgcagtcaa gtcaatggag ctctgttgta gtggttgctt
      181 cagtgaacat tcaacgctgt cggtgagttt ggaattaaag tgaaaaccat cgaccgttga
      241 ttgtaccctc cagctaacca gcctcctcct tacttcatgc tttcaggcct taacaccgaa
      301 gatagcaacc taaccaccat atgatgtttc tccctcaccc tgccaagctt taaaaaggtc
      361 acaatcaaca ttcattgctg tcggtgggtt taactatgtg gacaagctca ctgaacaatg
      421 aatgcaactg tggccccaca ttgtacagtt gccgttgaga ggagaacagt gagaagcaaa
      481 ctacagtttt ctgataaaaa tagtctttga ctgtgttcaa cttaactgac tttgtcctca
      541 ctttgaaaat gtgaaaacag ggcaggaaag aggaaagaat attttgcctt ttaactaggc
      601 attgttgaag gt
//
LOCUS       KCPA01000836             827 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 91486tic ultra-conserved element locus
            uce-4978, sequence.
ACCESSION   KCPA01000836
VERSION     KCPA01000836.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 827)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 827)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..827
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="91486tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>827
                     /note="ultra-conserved element locus uce-4978"
BASE COUNT          225 a          162 c          200 g          240 t
ORIGIN      
        1 taacagttca tcgcaccagt gcaacacact aatgtttact acaacttgca tgtgactttg
       61 tattggctgt gttgagtttt aacttcccaa aaccttcaag tgcattttgc tgcttcttga
      121 aaccacttct aaataagctc tggcccggca agatttgcag gagagcaaat ttcagaacag
      181 aaggggccaa aatctaatgc tcaggaggca ggtcttccta aattgttttg caggcactaa
      241 tccatcctga agtgcgtttc tcattaaagc tgaactgggg aagtagcgtg tggtgttcca
      301 cccagggggt tctgatgcat tccttttgaa taaatttatt gctgggtaat ttctatgtga
      361 caggagtata tcaggcgaca gctagaagag gagcagcggc acttggaaat tctacagcag
      421 cagctgctcc aggagcaggc catgttactg gtaaagcact gtatctgttt tgttcagtag
      481 ctataggatc catttatcca gccagtccta ggcttccctc agtcgggcac agctgcactg
      541 acagtatgac aacaaaggag cttgattaaa aggccattta tgctagtgtt gtgggctgac
      601 aggcacatat gagaagtgct gtatggtcac actgctttct aggcaataag aggaggcttt
      661 atgttaatgg aacagttctg gtgtggtggt cgagtttctg aacagacctt ggcatttagt
      721 gaagaactag agtgcttgtg ttgcagatca aaagcacaca tgatatgtaa aagatacaat
      781 ggcctagtgt tggtctaaat cattgtttta tgaactttac actgcat
//
LOCUS       KCPA01000837             666 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 91590tic ultra-conserved element locus
            uce-4910, sequence.
ACCESSION   KCPA01000837
VERSION     KCPA01000837.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 666)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 666)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="91590tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>666
                     /note="ultra-conserved element locus uce-4910"
BASE COUNT          206 a          121 c          119 g          220 t
ORIGIN      
        1 cacaactcca aagaaacaga aaatacattt cttttgatga tctgacaatg acaacatgta
       61 gctctggatc cctgcatgct ctattgatct gacccataaa aggctcatgg ttctatctct
      121 tgtttgtatt cttcatttta ttatcattct ctctctaagg tcagcagtgc tggtctccca
      181 gagaccatta gcatgctttt gcttatttaa ttcactaact gctgaagtgc atgctgcttt
      241 tagtggcact catacaactc caagctgaac ggtttggttt catgtacttg aactcaagtg
      301 acacaaatat ttcagtggtg aatcaatact gggaaaggat ggtcagtaag gtagggagtg
      361 tttatagaag atgtttcatc actactagta aaacatgtct tattgttagt tcaggaggtg
      421 ctggtattta gctctttgaa ggaggcttct gacaagccaa caactctcag cctgttagta
      481 aaacaaaatt taaaaaattg cacaagctta gaaatgcaaa aatgtctgca gattaactat
      541 ttaggaattc taatttccgt aaaaagagac aacttctgca gcactagcta tatggaaatg
      601 ttgaacataa agtacatttt ttgatttcat ttgacatgat taataaatga atatttactc
      661 tttcct
//
LOCUS       KCPA01000838             537 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 91697tic ultra-conserved element locus
            uce-4222, sequence.
ACCESSION   KCPA01000838
VERSION     KCPA01000838.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 537)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 537)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="91697tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>537
                     /note="ultra-conserved element locus uce-4222"
BASE COUNT          178 a          119 c           82 g          158 t
ORIGIN      
        1 ttccatacag aaatgacatt caatctacct actgaattga acgtcttcag actgcactgc
       61 aatgtaccat atgtaaaagc cagtaaggtc acaataattg aatctaaata agttgctgct
      121 gagggcaaag aaaaacttgt tctctctctc aacctttgta ttaattttcc ctcaattcaa
      181 ttccatctaa gtctggtgca ctctagtttt acaattcaat tggcattttt aaccaggaag
      241 aacattgctt aaaaacaact tatttgaaaa actacaaaaa gtaattccat agagacttgc
      301 cacttgactg acacctgtca tctcatgata aatgactcca ttttctgcct ctcttgcctt
      361 ctgccactcc ggcaatggtc atttatcatc atctctgtca gcaatggaaa gcagcactga
      421 cagtgcaagt cagcaaacat ttagcacatg gaaccacgcg acacagggaa attattattg
      481 tcagaataat aatggtttag cataatttat tacaggtcca ccaaataagc aaaggct
//
LOCUS       KCPA01000839             709 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 91808tic ultra-conserved element locus
            uce-5849, sequence.
ACCESSION   KCPA01000839
VERSION     KCPA01000839.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 709)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 709)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="91808tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>709
                     /note="ultra-conserved element locus uce-5849"
BASE COUNT          240 a          132 c          106 g          231 t
ORIGIN      
        1 gcttctttgg gagtggcagc tgtaaactat taaatgttta ttaataatac tagcagtaat
       61 gacaaacaca actacaattt cattagcaat acagggaatg taacattccc atcacttcct
      121 caagaaacca ttagcaattc ttttcatgtc ttctggtact tttcttgcaa ggatgcttct
      181 tataatgtac agctaatttt gacaaattta cgtaattgaa ggagaggatg atggatttga
      241 aactctgatc agcagctggc agctgtgcag aaaaaagctg cttctcttca tcaatgtcaa
      301 agccagaact gatgaacaaa atttgccctt gacaattaga agacacccat gaatttcttt
      361 agactgctgg gtacagtttt cttaaaaatg ttcttgtcag actccaacac actacctgac
      421 agcttaatta actggctttc aaccgcaatc tcagatattt aaaacttatt aaacttacat
      481 tccatattga tgtctggctg atagatctct gaattgcaca gctgatatgt gcctttttcc
      541 ttgaaaagcc atgaccaata caatatgtat ttaacactga tacatatttt aacttttact
      601 atttaattca tacactatac aatagatatt aaaatgctaa tattgaaatg accaatagat
      661 aaagatgata gatttccttg ctcttgacca aaaagataat atttgaaca
//
LOCUS       KCPA01000840             501 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 91916tic ultra-conserved element locus
            uce-5103, sequence.
ACCESSION   KCPA01000840
VERSION     KCPA01000840.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 501)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 501)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="91916tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>501
                     /note="ultra-conserved element locus uce-5103"
BASE COUNT          149 a          108 c           87 g          157 t
ORIGIN      
        1 tgcatggaag cctgcttcta gtaagaagtg tatcaattca aaattgatag caaattttct
       61 acctaaggag tgttatgccc tcctccacgt gaaatatatc tccataacta ttgccacgct
      121 tgcaggcact cttaagccat ggatctgccc tggttagatt actttcaaca ggattactgc
      181 acccccttaa ccaaatgctt tatgtctttg ttcatatggt tttaatatgg ttttaaccaa
      241 ttgcaaggtt atttataagt ttgcaactcc ccagtagtta gagttatgaa gcgttcagac
      301 ttaagcatat ccagttgtgt ggtaacccaa ctactgcttt catgcggttt ccaacttttt
      361 attcatgtac aaaggcatga tgcatggcag tatctgagac cattctgatt aactctttgt
      421 ttcagcagtg cagcaggcta cagtaaaatt acataccgaa aaagattaaa acacacaaac
      481 tgaaattcca ccacagactg a
//
LOCUS       KCPA01000841             504 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 92023tic ultra-conserved element locus
            uce-1188, sequence.
ACCESSION   KCPA01000841
VERSION     KCPA01000841.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 504)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 504)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="92023tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>504
                     /note="ultra-conserved element locus uce-1188"
BASE COUNT          162 a           68 c          119 g          155 t
ORIGIN      
        1 tttccttgcc aactcattcc tgacaatgtt aatgattcac tataaagcag cttctgtgct
       61 atgatttgtg acattcaggc tggttagatg ggaggactag gcaggtttct ggggagtgtt
      121 ttggatgcag aaatgccttg aagatagcac tttattatat ttaggacaag tatgacatcc
      181 cacttcaagg aataggcccc tatacatatt gagaagggat ttctatggtt taagtgggga
      241 ggagaaggtt agtttaaaag aatgcctctg tgttttttga gacgacataa agataggagg
      301 tagagaaatg gaggcaggag gcagaaggat tatggataat ggaagaattt tgcctgaggg
      361 tatgtgcctg ctttgcctat tcctgtataa ctagaatatt tataattcaa atacttatct
      421 ttaataatta aaaatgaagg aatattaaag acaaaaggta gagaatatta tgtacacata
      481 tgtaggcatc atgcattaaa tccc
//
LOCUS       KCPA01000842             579 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 92131tic ultra-conserved element locus
            uce-1796, sequence.
ACCESSION   KCPA01000842
VERSION     KCPA01000842.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 579)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 579)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="92131tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>579
                     /note="ultra-conserved element locus uce-1796"
BASE COUNT          168 a          105 c          107 g          199 t
ORIGIN      
        1 ttaattgtct gcagatttat atgaagcaca ttagtaaaca tggagatatt agtgtttcag
       61 aattcaaaaa aagcccagct gtgctggtga ctaaccaata catgaactga atctcacact
      121 ctgcaaggac ctttggttga cattcgattt tgaacctgcc agatgcattt ttgtgaacca
      181 gggatactgc atctttaatg aacaagtctc tactctttcc cctgttttta aatacaacac
      241 aagcagtgta gcactaggca ctgcaattgt caaagacaat tagactgaaa gcaggaaaat
      301 ttcacctccc tgtctcagtg atatgtagaa tgtcggcagt gtgggtcagc cttgccacag
      361 agttgtgtga gaatatatga atcagtccta tagaatgtta aatatttata aaatggttct
      421 gtactacacc aaggttggga gcacattcat tccttcttgt tgttttataa tagcaaaagt
      481 ttatttccaa acctaaactt tgtgtggttc atttttcttt ttttcttctt gtggtttata
      541 tgcggttgct agaggctttt catttccttt ttaaaaata
//
LOCUS       KCPA01000843             613 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 92239tic ultra-conserved element locus
            uce-2868, sequence.
ACCESSION   KCPA01000843
VERSION     KCPA01000843.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 613)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 613)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..613
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="92239tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>613
                     /note="ultra-conserved element locus uce-2868"
BASE COUNT          199 a          100 c          124 g          190 t
ORIGIN      
        1 tgtgatgtga ggcattagta atttagcaat taatcattat gataaaggta atttattagt
       61 cagtcatcat gaaaaattaa aacaggcttg tcaacttaca attaatattt tgaattttag
      121 atttttgcta tttcccaact gagtagaaat ataaaacatg aaacagatta gttgatgatt
      181 gctctatttc attttgattg ggtgagacta agtggtagga ttgaagtcct tgctaccgag
      241 agccccacca gtacagaagc attaggatga gaaaagattt tcactcactg ggtggtctgt
      301 tcgctgccaa gtttttgaag tggctgcctt ttatcacttc tgctgataat cttccagttg
      361 tagcattata aaggaggcca atgaggattt ctggagctga gccatgtacc agagactgac
      421 aagaggaggt actttcactg caggacactt ctgacatgct cacttgagag tcacaaccct
      481 acaaaacaga taaaaagttc tgtgtgtctg ggaagtagat ttttagaata atgcatagaa
      541 aattctgaaa gcaacttagt gacaataaca agttccgttc aatcacccaa taagaaatgt
      601 accttaattt gta
//
LOCUS       KCPA01000844             506 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 92344tic ultra-conserved element locus
            uce-6457, sequence.
ACCESSION   KCPA01000844
VERSION     KCPA01000844.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 506)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 506)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="92344tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>506
                     /note="ultra-conserved element locus uce-6457"
BASE COUNT          188 a           76 c           81 g          161 t
ORIGIN      
        1 aaggtgttat atattgtcat ggtaattata attgggttat atgtatccaa ggtacagaac
       61 ccatacatgg tgatggcata aaagagggtc ttataaatga gactgtaggg catttaacta
      121 aacaattgca cgcagaataa agagcttaca taaaagtgtg tattatgcag atcttagaaa
      181 cctgtgtctc tgagaagaca ctattttgac cataatgcat tctgtcatgt gagataaaat
      241 gcagagaaca tttacatttc tcccactcac tgagcttcta tcacacggct tgcatttttc
      301 ccacatcaat aggcatcttt ttaaacatta tattcatgtc tgtctctctt gatggcaaat
      361 aaaattcaat aaataaaata ctttatgata aatatgttag atttaagaaa cagttgtgat
      421 aaaatgctca caaaaaagat ttgttaaaaa caaataaatt taacaagact tgtacacaag
      481 ctcaaaatgt attaatatat tgtaga
//
LOCUS       KCPA01000845             557 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 92457tic ultra-conserved element locus
            uce-5133, sequence.
ACCESSION   KCPA01000845
VERSION     KCPA01000845.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 557)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 557)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..557
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="92457tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>557
                     /note="ultra-conserved element locus uce-5133"
BASE COUNT          184 a          115 c          113 g          145 t
ORIGIN      
        1 tttgtagaag caaaacaatt tagaactatg aattgattag tgaaagtaat agtacagcta
       61 cagtactttc ctctccctgc gggttttcag ttttaaaggg gaaaaattca aaaccaagac
      121 tgactgagac ttgcagctca ttaaagctgg ggtgatttcc actatacaga attctattga
      181 tctccacagt ccacagtaga caaaaaagtg tggtcaggga ggggatgatg gatgcctctg
      241 ccaatagcac tgaacaaacc tgttagctaa ttgctaccaa agacaattat ccccgcattg
      301 tttcataatg gaaacacatt acaaaactct aatatacaca cagggaaatt tgatgatttg
      361 actgcggagc catgtgcatt gaatctcatt gctgaaggcc agccaggtcg ctgctgtgag
      421 gggaagaaag tgtcagaata gaagcctgag tatctcacag ctcattttgt aaaacgagtt
      481 tagcaactcc taacgacact gcaattcccc tgccacaccc atgtacaaca caaggcatgt
      541 atcttttaat gaaaaat
//
LOCUS       KCPA01000846             798 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 92569tic ultra-conserved element locus
            uce-3078, sequence.
ACCESSION   KCPA01000846
VERSION     KCPA01000846.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 798)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 798)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..798
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="92569tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>798
                     /note="ultra-conserved element locus uce-3078"
BASE COUNT          267 a          153 c          132 g          246 t
ORIGIN      
        1 gccatgataa tcataattat ttgaagctga tatttgatta acactgccag tactctataa
       61 gtgatttcca ctagacaaca tctaattatt taattatatc ccattattaa tggaatgaaa
      121 caattcaaaa caaacagcta gaatgactgt tttgcaggaa gctcataaac atcaattcgt
      181 acgtgtagaa atcttactaa aattatatca agctgacctg ttgaacttga aaggcatatt
      241 ttatcccaat caatgcaaaa attatctata actaaggcat gtttctctgc tgtacagttc
      301 agctgtaatg atccccacac gctgcacttg cacatcaatt atgataatca taatcacggt
      361 cgttaagcgg aatgttcatt attatcagga tgctggtgac agcagattca atcatcgggt
      421 gcaatgggca ggcagtcaca gtcccaccca agtttctgca gacagcgttg tgccacatta
      481 aatctacgat gtgttccaca tcccactcca ttccaaaagc tgtagacggt aaaggtcaac
      541 tttatgttct gtgcaatatg cttaggttct ctaaattaat tctttgcagt ccagggtatt
      601 tgtagataat aaaatcctgt ttagggccaa aatgcctgtg caaataatga aattgtgatt
      661 cagttgtact gtaattcacc tataataagg catcagaggg aagaatctat cagctatcaa
      721 ttcctgaatt ttacaaataa gaaaacatta aacgctgtca ttaaagtcag ttttctaaaa
      781 tgcatatgca aactaatt
//
LOCUS       KCPA01000847             756 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 92679tic ultra-conserved element locus
            uce-2714, sequence.
ACCESSION   KCPA01000847
VERSION     KCPA01000847.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 756)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 756)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..756
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="92679tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>756
                     /note="ultra-conserved element locus uce-2714"
BASE COUNT          226 a          139 c          136 g          255 t
ORIGIN      
        1 tgtgtctgtg taactaaatg ctttttttgc tttcagattt tgaaatatta ggtgtatctt
       61 tcctatttac agttcccctg tccatctata agcttttggc aacagttgat acaactgtgg
      121 taaaaggtga ttaatggaag gcaagtaaag gaataattaa tcaaaccaca taagaacaaa
      181 aaattatgca gaaatgacaa gaatagtcta aactccttgt gctttggcac caatgaaaac
      241 agaccagaga aaaagttcat gaatgtgctc caattaatct gtatgcacac tgcaatgctc
      301 tttagtttgg ttcatttaaa tctgaaattc ccttccctgt tgatgtcagc tagttagcca
      361 agatggtgca ttactgttat gatcactgca gcgcatataa tttagattta tctctttagg
      421 gactcagctc caccccctgc tagctaatat gctcaccatg tttaatgatg caaaaaattt
      481 ccctgagtac aggttattta tctttatcag ggactgcttt tggctggctg tcagttatca
      541 gccagaatat ttgttcctaa atggtttgta ctcatccata ttctagggca attctgaggc
      601 ccatattatc actgatgttt gcaataaaag tgtttcagtt cttcagatac accttagtaa
      661 tactgattta tgagtctgga ctggctgtat ttctgatgca gtgatatgaa ccctgaaata
      721 tctataactg tcatggaagt gaaatatcta tccaaa
//
LOCUS       KCPA01000848             598 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 92787tic ultra-conserved element locus
            uce-1181, sequence.
ACCESSION   KCPA01000848
VERSION     KCPA01000848.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 598)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 598)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..598
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="92787tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>598
                     /note="ultra-conserved element locus uce-1181"
BASE COUNT          199 a           90 c          142 g          167 t
ORIGIN      
        1 attttatggc tgcgctgcag cagcggaatg tccactcaat ctgttgagaa gttacacagc
       61 aaacatgcgc cgggcatatt aaacgcgggc ggaacggcgc agtgaatatt tattagcgaa
      121 aatataggtt ctcaaaaaca gaaataaaac agggtaatgg atgaagggga gaatagattt
      181 aacactgaaa taaatatcaa aggtgcaaag caaaatatag tgttcaaaca aagctgcgaa
      241 ttgggcccag atttaatgcg tcccctggga tgaaaaggtt ggacagactg ttggaattga
      301 gatactactt ttagtacaca gcccctgtaa tgctgtcagc tttatttcct ttgacaaatg
      361 tgaaataaaa tttgtcaaag ttagggcttg gtaagtttgc tattgaaaat tcaattggta
      421 ataactagta gagcctggca ctcaggacat ttttaaagga aaggaatgtt taggatgctg
      481 ggagaaaaag tgtgctacag attgcagttt taaaaattta acagctgact taggcaaaga
      541 gattcctctg tttattatta gctataatca agagtggagg tgccactttt ttggtgtt
//
LOCUS       KCPA01000849             666 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 92898tic ultra-conserved element locus
            uce-315, sequence.
ACCESSION   KCPA01000849
VERSION     KCPA01000849.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 666)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 666)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="92898tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>666
                     /note="ultra-conserved element locus uce-315"
BASE COUNT          224 a           97 c          143 g          202 t
ORIGIN      
        1 gttctgttta gctatgtcaa tatggatagt ggtatatcag catatatatc gcaaatatat
       61 ttcaaggtgg aaatatttaa ttagcccatc tgcaagcata aatagcaaat ctacattctc
      121 aattaattta gtgaaaatta caccattgac catttcttta ctgcactgtc tcagaatgga
      181 gaagggagag atattagttg tatcactgta gagcagtgag atttctgtaa gtcgtgatct
      241 gctggcatgt aataactcga tctgcttcat gcagacgaaa tatattaaaa gtatggacga
      301 gtgaagtttg tgccccaggg agaaggcaag ataatgcatt gaaattgttc agaggtagtt
      361 agatacctaa tggtctaata tgcgagctat gtgaggtctg gggtctggtt ctcataaatt
      421 ctggctagac tgatcctgta atttcaagca aaggataaaa gcgttaacca gagtcatcag
      481 tgttcaaggt ccatgatgct ggatattatt catgtaaaga ttcaagaaaa acactaaaag
      541 gaaagcatac gtgtttatat gtggcaatat ataaaatatg tgtgtattcc ttgtgtaata
      601 tgcacaggaa ttaaatgtgg acgttagcat atgtataagc taacaactga atcgccaaaa
      661 taagag
//
LOCUS       KCPA01000850             525 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 93003tic ultra-conserved element locus
            uce-2716, sequence.
ACCESSION   KCPA01000850
VERSION     KCPA01000850.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 525)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 525)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="93003tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>525
                     /note="ultra-conserved element locus uce-2716"
BASE COUNT          163 a          101 c          109 g          152 t
ORIGIN      
        1 gggagggaac ttgcccaacc catctgatga caagaaatgg gtcagacgcc ttaccactgc
       61 aacttagttg tgttttatta tttattaggg aatggaacag cttttacagg gacaaagaga
      121 aatgaaatca ctttcagtga aagaaagagg cctcattata gccaccaaca gcagttattg
      181 acagctacac ttcctattaa caaggagcat ttaagagttt ggctgttgga tctttggact
      241 tgatctaatt tgctagcatt aattagtttc ttttgagcac agacacttgg tgctcacagc
      301 tatagattta gaggactaat taggacagaa aattgaacag aatggggtaa ggcattaacc
      361 ttcaaccatt accagctggg gctctgataa agaccacaga gtccaaatgc tcctattcat
      421 gcaaagagta ctctaatgaa tatcaatttc agccaggttg ccatatctta caagccctgt
      481 cttgattttg attctcttac ctggcagaga ttttgatgta cagat
//
LOCUS       KCPA01000851             719 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 93111tic ultra-conserved element locus
            uce-5961, sequence.
ACCESSION   KCPA01000851
VERSION     KCPA01000851.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 719)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 719)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..719
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="93111tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>719
                     /note="ultra-conserved element locus uce-5961"
BASE COUNT          219 a          122 c          131 g          247 t
ORIGIN      
        1 tttaattgaa taaatatatt acacagcagg gcagattatt ttctttgtgg ccttgctgtt
       61 gcaatttgag aagagataca atttccttca gctgatgaag aaagcaacat ctgttcttgg
      121 tttcctgcag ctttccttca gacaatgcat ttagatgcac aatttgaatt ccttcccaag
      181 aaatagaaaa ttaaaacttt gacccctcct tcaaagtggt ggttgcactg tgacaacagt
      241 gggttgagct aaattcagct atgtcaggca agaactataa aagtagatag attgccctct
      301 aagcttcact ttattggata ttgtaattga catatagttg tcatttataa tcatctgtcc
      361 attcctgtga gctgggagca gtaaagttaa ttgtggctgc tcatttgcat taatctcacc
      421 tctgaagggt acagtaaccc attaatatca tgtcatgatg aattatcaca aataacattg
      481 aacatattga ttaatgatct ctgagatttg tatctcgtta aaacattttg ttagctcttt
      541 aaacttttaa gcagacagtc aatgtatgcg ggagaggttt agagatcacc cacgaggtga
      601 tgaaaagtta tggcacacat tttgggtcac taattaaaaa ttgtttttcc atattcattt
      661 taagactgct ttttccttct aaaggtatag atcttgaagg ctaagaattg ccttattat
//
LOCUS       KCPA01000852             723 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 93210tic ultra-conserved element locus
            uce-733, sequence.
ACCESSION   KCPA01000852
VERSION     KCPA01000852.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 723)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 723)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..723
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="93210tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>723
                     /note="ultra-conserved element locus uce-733"
BASE COUNT          236 a          112 c          131 g          244 t
ORIGIN      
        1 agcagctctg gtgtcccagt gtaacaccag tagggaacag tgatcctctg gcttggtgtc
       61 aaggaagggt gacagaaagc tcaggggttt gtttgtgaaa gtgtgcagtt tggaattttc
      121 tttccataat tgttagccat aatgtgtata agacctccac cttgatatga ttcctagcag
      181 attagggata ttagataatt tccttctatt tattgtacta ctgcactgta ttatctttct
      241 atcactcaga taattactaa ggaaatctac attaattttt tttggctagc acaaggaact
      301 gctaaacact ggcatgatgt attgatgttt tacacaacaa aagttttcct cctgtcattg
      361 tacaataaat aaaaagatat ttatcaaaat gcaaagcctt tcatggattt taaagaacaa
      421 agcaaataaa atacaagatg agcatggaag caaaacctag aggcttcctt aactgaacaa
      481 aattaaggac tctgaagcct cgagtactgt acatattaaa cactcacatt caagtaagat
      541 gttgtttgct aaattatgaa tgtgtgtaat taaaatctag tggctgtttc tatgaaagat
      601 ttacaatgtt atttcatcgt ttgtcatggc taattaacaa tattagatga agtttttctt
      661 cttcaaaggt ctgatttttt ctcatttatt tatgtcagaa gtgataaaca gagtagttaa
      721 aag
//
LOCUS       KCPA01000853             687 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 93321tic ultra-conserved element locus
            uce-649, sequence.
ACCESSION   KCPA01000853
VERSION     KCPA01000853.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 687)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 687)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..687
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="93321tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>687
                     /note="ultra-conserved element locus uce-649"
BASE COUNT          199 a          162 c          111 g          215 t
ORIGIN      
        1 ggctatgtga tgcgcaggga ttctgaaatg cttcccctca ttcacagttc tcctactaat
       61 atcctgggca ttattagtag ttcacaaagc cagcacattt tctttttgat aagtgtcgct
      121 gttctgccct cctttgtcca cctccaaatg cctcctagta cttacaaaga ataaagccgt
      181 gctgcctaac tagcctggtg cattggattg ctacccctac tcactcagtt gcctgtaagg
      241 ggacgtactt atatcatgaa agataaatcc cagctagaaa tacaggtccc tgacaaccta
      301 atcactgaaa ccctgtcaag taacccctaa ttttaaagca agtggttaat tcccagcaaa
      361 ttgatttatg cactgtttga ggtttggtga gttgtgttgt tcatctgtta ttaccacgaa
      421 ctcaactcag cctattcatt tagaccactg acacaacaca gtgcatctcc caagaaaatt
      481 tcctttgtca gcacatctag aatttgctaa ttaaatcaac gatgacatta ttcactttct
      541 gaaaaaagca acttctctct cctgccttaa tacacgtatg tgcataaaca tgacacataa
      601 gcatggtttg taaatgtgct caaaactttg aattatcttt attaactgtt ttagtaagtc
      661 taaatcaact ggtcatctca gtagaca
//
LOCUS       KCPA01000854             740 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 93431tic ultra-conserved element locus
            uce-2418, sequence.
ACCESSION   KCPA01000854
VERSION     KCPA01000854.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 740)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 740)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..740
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="93431tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>740
                     /note="ultra-conserved element locus uce-2418"
BASE COUNT          219 a          145 c          121 g          255 t
ORIGIN      
        1 gattattgtt cttgacattt ttctggaaaa agaagaaaac ttccttgttg ctgttccaga
       61 cacagcatct ttactatcta ctgttaccct ttctgaggtt aatctattgt aaaattagat
      121 tgtaaaaatg gacacagttt ccacatttag atgccagcac tgaaggactc gtggaataat
      181 tcaaatactg cacaattccc tttgcagaaa tcactgcaaa attcatttgg taaaccatgg
      241 aaattagcat ggattcttcc tcagttcaat tcatctttta gaggttgtta cccttcccaa
      301 tctgattgcc ttaagaacac agattgtctt ctcttgatgg tgaaactgct ttaatcccct
      361 tttccaaagg tcaactaatc tccagtctta agtgcaatag atgcaaatac agttctcttg
      421 ccatgttcct tctaatttaa ttctctccta agctttcatg tataaaccta gtaatggatc
      481 aagtttggaa ggggtcaaaa ggtttctgtt ccagtaaaat ttaaattgac atcgcatact
      541 gataatggtt tgctctactt tactataaac accagctact actctactgg gatataattt
      601 tgtgcaagaa ggcaatgttc caaacagaag cagaacatgc tctttgtttt tttgcagaag
      661 ttgatgactg caatctgtga tataaaaatg cataattttt aattcgcagt tgttgcgcag
      721 catctctgac caacttgttt
//
LOCUS       KCPA01000855             388 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 93645tic ultra-conserved element locus
            uce-6198, sequence.
ACCESSION   KCPA01000855
VERSION     KCPA01000855.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 388)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 388)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="93645tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>388
                     /note="ultra-conserved element locus uce-6198"
BASE COUNT          132 a           70 c           71 g          115 t
ORIGIN      
        1 aaaaatagca catcaagcac cttgttaaat taactccttc attaataacg tggctccagg
       61 ttgtgtgaag cccataaaca gtttctaatt agtcacatgt ggattcaaat gcagacttgt
      121 acaccataaa ccaacactga agtgtataag aaactgtcag tcagatcaaa agtcaatcca
      181 aaatcatccc acttgcagag ctgagatgct gtcacagtta gttagcccaa atgtttaaaa
      241 cagtgatttt attctaattg agcatgagtt gaaaggctgc agactttgat gtctctgctt
      301 ttatcatttg tatatagcta aaaacagcag ggtgagtttt cttagaaatg agagacatta
      361 cttcttatgg aaaatataca ggtaggtc
//
LOCUS       KCPA01000856             804 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 93866tic ultra-conserved element locus
            uce-2341, sequence.
ACCESSION   KCPA01000856
VERSION     KCPA01000856.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 804)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 804)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..804
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="93866tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>804
                     /note="ultra-conserved element locus uce-2341"
BASE COUNT          222 a          192 c          179 g          211 t
ORIGIN      
        1 aatcagcact ttgaatgaaa ttttgttccc ctgtggcacc ttgaacaggt tttgaaccag
       61 acttataact ctgtggcaca gcagctatgc agcttgaaat ccaagtagca ctcaatttta
      121 ttatttcata tttgtacaat aagcttccca gacgacgtgt caacattttt ggtgaagagc
      181 ttgaaaggct tctgaaaaag aagtatgaag ggcactggta tccagaaaag ccatacaaag
      241 gatcagggtt taggtgcatt catatagggg agaaagtgga cccagtcata gaacaagcat
      301 ccaaagagag tggtttggac attgatgatg ttcgtggcaa cttgcctcag gatcttagtg
      361 tttggattga cccatttgag gtttcatacc aaatcggtga aaagggacca gtgaaagtgc
      421 tttatgtgga tgataatgaa aatggatgtg agttggataa ggaaatcaag aacagcttta
      481 accccgaggc ccaggtgttc atgcctatta gtgacccggc atcttcagtg tctagttctc
      541 cttctcctcc atttggtcac tcagctgctg tgagcccgac cttcatgccc cgctcaactc
      601 agcctttaac cttcaccact gccacatttg ctgccaccaa gtttggctca accaaaatga
      661 agaatagtgg ccgtggcaac aaggtcgccc gcacctctcc caccaacctt ggcttgaatg
      721 tcaatgacct gctgaagcag aaatccctct cctcctccat gcactctctc tatgggcttg
      781 gcctaggcag caacagcaac agca
//
LOCUS       KCPA01000857             591 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 93972tic ultra-conserved element locus
            uce-7811, sequence.
ACCESSION   KCPA01000857
VERSION     KCPA01000857.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 591)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 591)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="93972tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>591
                     /note="ultra-conserved element locus uce-7811"
BASE COUNT          172 a          128 c          115 g          176 t
ORIGIN      
        1 agaaaccaaa gtcagccgcg caattggagc tggattccat cactcaccac tcagtcacaa
       61 cttcttttga attcctcggc tgccctgagg caaaggctca atgttgatac tgagattaat
      121 cccaaaagag ccccttattt ctcagcagag aaattaaagc ttgccagttt tcctttcacc
      181 tgtccttctg acagctctgt cagtaatgat atgccttcta catggtataa tccccatcct
      241 atggtaaaga ataatttatt aagaaattaa ggggcttagc tcctctctgt cgggttggtc
      301 ttcaaaagtt ggctgatagc agagacagca tgattatcaa tgaaaaatta tttaacagta
      361 ccttggggct tttttagaca aagcctaata agtcacatgg gtagatatca atcaaattta
      421 tcccccttag atttagtaaa tattccccga agttaagtca aattatgttg attatatggc
      481 tcctctcctt gcagttcagt gtgactgtgg ggcacagtcc tagtttaggg agaagcatat
      541 ttttagcagc acagcagcag cgtgacatgt ttgctaataa agctgacaca c
//
LOCUS       KCPA01000858             698 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 94084tic ultra-conserved element locus
            uce-7514, sequence.
ACCESSION   KCPA01000858
VERSION     KCPA01000858.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 698)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 698)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..698
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="94084tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>698
                     /note="ultra-conserved element locus uce-7514"
BASE COUNT          208 a          122 c          121 g          247 t
ORIGIN      
        1 aaggatgtac tcatgtacat gatcatttag actgtagatt gcttttattt tattttgtca
       61 gtgttttgat tctcttgatc catatttgcc tactgcattt caaaagggaa tcaaattggt
      121 tttgtggtgc attaatgttt tatgcaatat tccatagaga acattaaatc aaaataaaaa
      181 ggttgacctc taacacttac acccatttct tatgtcaaac tggaagatgt tgaaagcctt
      241 atatggtcgt aacccttcta tctaactgtg accctcctta acattaagca ggtgactcga
      301 ttaaacataa atcaggcata aaatgccctg catgaggcag cacagtgaat caagcaaatt
      361 atcaaatggc aaaactcatt ctgtgctctg ggcaatgtaa gctgccagca cttatacatc
      421 aaaacttcac tcagtgtaag attgatttta ttttattttg tttattttaa ttccctacag
      481 caagctgtgt tagttgtgta aaatgctgtc tgcatcatta cattcctaag aaatgctttt
      541 cttgtttagc aaaggccagt tgcaatctta agcaacataa tctatctaag attgcgctct
      601 gtagtggatt ctagtggggt tgatattttg tgcagtaata gcaaaactta agcttctgtg
      661 attgtataga tctatttgtt tgtgtgtaca catacact
//
LOCUS       KCPA01000859             451 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 94190tic ultra-conserved element locus
            uce-4063, sequence.
ACCESSION   KCPA01000859
VERSION     KCPA01000859.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 451)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 451)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="94190tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>451
                     /note="ultra-conserved element locus uce-4063"
BASE COUNT          151 a           77 c           80 g          143 t
ORIGIN      
        1 tacttcaagc aggtgttaca tacagattat gcttaaggca tctaaatagg gattgtagca
       61 catggtaaag atttagtaaa tacttttcta gtccaaaatc aatgccattg attgtcatta
      121 aagcagcaag ctaatgaagt ggtttctaat tttcaagctc ctgctggagt ctgctctatc
      181 tcttcttttt ccagttaaga gcatcattaa atggtaagag caaacagcat attgagaggc
      241 caagtgtttt attaattcat catcagaatt atctcagcac attaatatta atagcctcaa
      301 attggatttc atttaggagg tgaaataaat atgctgatag taaaagccta catagccaat
      361 gaatcttttg aaatggcact taaacatagc aatactcaca cgagatttga taagtcagaa
      421 ttcctttagc ttaggggcac cttccaggta a
//
LOCUS       KCPA01000860             581 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 94303tic ultra-conserved element locus
            uce-3174, sequence.
ACCESSION   KCPA01000860
VERSION     KCPA01000860.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 581)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 581)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="94303tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>581
                     /note="ultra-conserved element locus uce-3174"
BASE COUNT          144 a          132 c          138 g          167 t
ORIGIN      
        1 gactttccag ctttacacag tgacattgtc cagtcttcac agggaggtaa tattgctaga
       61 aactcagtct aaaatgaatt ggcctcatcc ggtaagagtg aacagggggc agtttcctgt
      121 tgatccttca gaagttgtgg ctgtacctgt caccttggtt tttgcccact gccatctagc
      181 cctgcccctg gtccagcctg agcagttgtg ttttggtgaa cagatgaagt gcttagacat
      241 tcatagactg agacgccaca aattcagttg ggttctcctg tagctctaag cagatttctg
      301 ccctctgagc catgacagcc ccggctgggg ctctgaatgc tgatggcagg gccttttatt
      361 attaatcagg aattcatgtg aattaatttt cagaggaggg gttggaattt cacatcataa
      421 attcaatgaa ctgaaactgt catgtgccac acggttgctg cacctgagct ccatcctcct
      481 gcagatcaca ggttgcagaa gggtccaagg cagacataca gatggagtct gttaattaat
      541 aaaagctcag atcacatgct tgcagattgc tttgtttcca t
//
LOCUS       KCPA01000861             653 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 94408tic ultra-conserved element locus
            uce-1358, sequence.
ACCESSION   KCPA01000861
VERSION     KCPA01000861.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 653)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 653)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..653
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="94408tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>653
                     /note="ultra-conserved element locus uce-1358"
BASE COUNT          241 a          120 c           94 g          198 t
ORIGIN      
        1 aaaaccacac aactaaacaa aactcacgca acaaacatct gagaatctgg acacttcaca
       61 tcagtgttta gaagtgtttc ataaatatct taagacaagt gtatcaaaac cttggcatgt
      121 ttaatttttg ttttactatc agaaagttat ggctataatg ccgggtctgc ttaatttgac
      181 ttaagagttt aatatgactt aaacattaaa agctcacact accccgaaat atataatttc
      241 acgcatacgg tgacattcaa cattcaagtg ccagtgtttt tgtactgtct tttggtcaag
      301 tttctttaaa ctttcaaaga atcactttta ggcttacaaa aataaatatt tgtcaaaaat
      361 gttcaataaa tattacacaa aactagcagc aaaaagtatc tagaaatctg tcgtgtgcaa
      421 atagttttct tcccagctat cattcccatg gtcccaaata agttttagaa tctatttcct
      481 tctccttaaa caagctgcgt tcaatctcca agagacaaaa taagattgga agttaaggac
      541 acgcacacaa gacatatata aaattctctg aatgtgcaat aaaagaagta ttttgtaaaa
      601 agttatgggc aaaatgtaca agggcctaaa cctagacttg aaatagcacc ata
//
LOCUS       KCPA01000862             341 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 94512tic ultra-conserved element locus
            uce-7719, sequence.
ACCESSION   KCPA01000862
VERSION     KCPA01000862.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 341)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 341)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="94512tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>341
                     /note="ultra-conserved element locus uce-7719"
BASE COUNT          101 a           49 c           72 g          119 t
ORIGIN      
        1 tgttgcaatc caaaaatatt tgttttaaat gtattctttc tgaattattt cccctctgtt
       61 ttctttttct aggctgaggt tcagctatgc tatctggaag cacaaagaga tgctgttgaa
      121 cagatgtcct taaaactgta cagtgaacag tacaacagta gtagcaagcg aaaggaagag
      181 tttgctgata tgtcaaaagt tcacacagtg ggaagtaatg ggtagggaac tattcttttt
      241 gttgttttat tctcactgat ctggtatatt ttttctacta gttaatcagg attaggcaaa
      301 gaggcaggat atatggatgt ctggataatt tatccaaatg a
//
LOCUS       KCPA01000863             539 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 94619tic ultra-conserved element locus
            uce-3501, sequence.
ACCESSION   KCPA01000863
VERSION     KCPA01000863.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 539)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 539)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="94619tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>539
                     /note="ultra-conserved element locus uce-3501"
BASE COUNT          194 a           93 c          105 g          147 t
ORIGIN      
        1 aaagtgatcc tgaaggttga caatcacatt taagacaaat atagaaatct aaaagaaatg
       61 cttacaagca attctgtatt ctgggcaatg atttggtttg aaaatgcatc cagttcaagg
      121 gttaaatgaa agcaaaagca atcacttcaa ccatgttttt gaagaaaata aaccagcttg
      181 atgtaagcta aatgaagggg gtctgtgact taaaaggaat ggacagatag agaaaaaggt
      241 cagaagatta aattttccct aagggaaaag tcattctttg gaatcattaa cctccttcta
      301 ggtcactact gaaaaaaaca gcaggaaatc ctactgctcc tggaaagatg ggtgcatcgt
      361 ataccaccca ctgacctagc aactctatgg caaacataat tgtgcttaca aattctcctc
      421 caggcatgct tggttttact atgcccattt taaagcaata tgatctttta gctgaactct
      481 gaagtgtatc tataaagaca atattccagg ggcttgggat gttaaaaaga aggataact
//
LOCUS       KCPA01000864             705 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 94732tic ultra-conserved element locus
            uce-274, sequence.
ACCESSION   KCPA01000864
VERSION     KCPA01000864.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 705)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 705)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="94732tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>705
                     /note="ultra-conserved element locus uce-274"
BASE COUNT          196 a          136 c          154 g          219 t
ORIGIN      
        1 atcaattttc catttaagtg gaagaggtta aacaatttac agaagtctac tgaagcattt
       61 gctccaagga tagccaggct ctttcttatc ctctccctgc ttttcacttt cttgtgtcag
      121 tcgaggccag ggtttattgt tttaggcttt tctgaacata caccagtatt tacactggat
      181 tgaaagcatt tgcttccaat gaaaatcttg tcttagatta cagcccagca gtgtaatttc
      241 cctcccagat gggagtaaag tagcagtatt tgcctaaaaa cagtaggaag aacaaactgt
      301 gcattaagcc aaggctgttt ttggcttgag ctaatgatgt aacagaaacc ttttatttgg
      361 gataggtcac tgcccgggat tgaaggaggt gatctggctc gcgcttgaaa ggtttctcca
      421 ttgtatctac ataagtcttc acttaaaaaa tcctgttcct aatgcttctg ctttcataca
      481 gcagaaataa acaggaaagg ttctggggag tgttataggt ggaatgcaga aagcttttcc
      541 tcccctaatg gaggatataa ttcaggtgcc ctggaggcat gctttcagga attctcttgc
      601 ccgaggtaat gggaagctaa ggctgcttga aggccttgat tatctattga tgcacaaagc
      661 tggaaaaaaa gtcatctccc ttggattata gtagatattt ccata
//
LOCUS       KCPA01000865             399 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 94834tic ultra-conserved element locus
            uce-5872, sequence.
ACCESSION   KCPA01000865
VERSION     KCPA01000865.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 399)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 399)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="94834tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>399
                     /note="ultra-conserved element locus uce-5872"
BASE COUNT          123 a           76 c           96 g          104 t
ORIGIN      
        1 atgtctttaa aaattgtggt gtgacaccca actgatatcg agcgtcctat ttataatgtg
       61 ggccaagcac catgctgtaa accagttcct atcatgatga tcagattgag aatgaaattg
      121 catttctgtc aattactgag ttggcaactg ttcaatatat cttagcagca agatgaagag
      181 cggcgtcggc agctgagaga gagagctcgt cagctaatag cagaagctcg atctggagtg
      241 aagatgtcag aacttcccag ctacactgaa atggctgcag aaaagttgaa agaaaggtca
      301 aaggcatctg gaggtgagct gaggaacctt gtatcttatt cctatggcaa cctagaaagg
      361 gtatcgcttt tattcacact tcaaaactca tcaggtgag
//
LOCUS       KCPA01000866             468 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 94942tic ultra-conserved element locus
            uce-3378, sequence.
ACCESSION   KCPA01000866
VERSION     KCPA01000866.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 468)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 468)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="94942tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>468
                     /note="ultra-conserved element locus uce-3378"
BASE COUNT          163 a           78 c           79 g          148 t
ORIGIN      
        1 ctagttgggt tagagcgaac actgcctttt aaaactttat ggaactaatt tatagtgtag
       61 ggcaggcaca gacttgatct cctggcagca aaattttatg tttccatttc agcaatactg
      121 cctaacacaa taatatcagg ccagcaaatc ttaaatataa gttaagctaa catgatccat
      181 tgccttataa agcaaaagta ccctgtggag tcatgctgaa tatgccaagt gatttttcaa
      241 aatttaatca tcctaaatgt cagataaagg tgcttttgct gtcattcttt aaaaccaggc
      301 tgagtgtgcc ttcaagttat accaaaaact gttcgaaaat agctatgtta aaatattaat
      361 ctgcaacgta aggaaggaaa tattgacgtg ttctattgaa aaataaagaa tggtataata
      421 aagatcacca gttttcatat caatatagat attatggttt ccttctaa
//
LOCUS       KCPA01000867             773 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 95052tic ultra-conserved element locus
            uce-663, sequence.
ACCESSION   KCPA01000867
VERSION     KCPA01000867.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 773)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 773)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..773
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="95052tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>773
                     /note="ultra-conserved element locus uce-663"
BASE COUNT          227 a          145 c          151 g          250 t
ORIGIN      
        1 ttccagaatt tcttcataca aagtctacat ctattccttt gcttagttaa caataccaaa
       61 ctcaaccaaa tcaaaccgga tacttgattc ttccttcaca gaaaatattt gacccattaa
      121 tgagaagttt tcttatataa aggaattcaa tttttttttg attggcatta gactcacaga
      181 cagacagaaa taagctgcca ttcttccatt tgatagccag acgctgccag ttgttgctag
      241 ggcagtcatg ctgttaaatt aggtctaatg aacgagtaat tgctttaggt atagtgaacc
      301 atttcaaaga aaacaaggat tctaattgat ttgcaatttg tttggcacat tgcattgtct
      361 ggggctattg attagtcttc tggatttcac actgcatgtg tttcccttta ttaagggaat
      421 aacaggttac tgattacttt ccttctgggt ttaatgtagc ggttaatgtc tactttgttc
      481 ttgtgtcatg tcacaggcaa ggaaggaata atatgcaagt gggtggccct ttgctaagaa
      541 actcccctgc tgctttgagc tgtgtactct aagacatgct gaaaagcaga tcaagagaaa
      601 gggttagaat agcaggactc acaagttacg gcctgagtca ggctagaccc aggctaaaac
      661 ttggctttcc tttactatca aagcacaaaa caagtggttg gcagtagatt cactcgtttg
      721 attagatgtc tctaaataag gaagcttaca atatttgtcc ttttgctgca aca
//
LOCUS       KCPA01000868             817 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 95163tic ultra-conserved element locus
            uce-1547, sequence.
ACCESSION   KCPA01000868
VERSION     KCPA01000868.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 817)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 817)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..817
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="95163tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>817
                     /note="ultra-conserved element locus uce-1547"
BASE COUNT          250 a          167 c          116 g          284 t
ORIGIN      
        1 aatatactct aatcctctga aataatccca aattaaaatc gctttaaaac atcccaaact
       61 gcctgctttg ccttcctatc tggatataca taaatacagc tatttttatt atccacatgg
      121 aatatttact atttgatagg atatgggttg gtttttttta cctctgggac attccacaga
      181 tgctacccaa cttcccctaa caatatttaa attgccttcc aaagcttctc taaatatttg
      241 ctgtgtattt agcatgccta agatttgccc gttatcccaa agtctttttg ctgtaaattg
      301 caattttaca acttcatgcc cgtgatatat tttgacaaag ctctgctgac actctctatt
      361 ggcctccaaa gacaaaatag ctgatactcc atgagccacc agagaactct caatttgttg
      421 tgagacgggc tgctactttg ccatcctcaa tctgcatgga gaaagattaa acattcaatt
      481 tgttacttga taggccacaa ggttcaccac ttaccataca aatggaaaac attactgtca
      541 ttcctcaact tgcttgcctg agtattttat tatttgtaat atttacttca gggaaattat
      601 gattcatgtc atatttatct tcatgaaaaa tgagcatcta aatggaaatc accttttgaa
      661 tgtaccagga tatagtgtaa tactaatatg cttcatgaac tataaaattt agtcacagtg
      721 tatggatata ttatagcatg actttaatac tctcacatca agcaaatttt ctctgtgtta
      781 agctgatact ctgagacctg atttcagttt gataatc
//
LOCUS       KCPA01000869             751 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 95272tic ultra-conserved element locus
            uce-2005, sequence.
ACCESSION   KCPA01000869
VERSION     KCPA01000869.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 751)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 751)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..751
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="95272tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>751
                     /note="ultra-conserved element locus uce-2005"
BASE COUNT          250 a          133 c          145 g          223 t
ORIGIN      
        1 aaacataaga aaaagtggag gctgaaacaa ggaggtggtt atatctgcac atgtagacgt
       61 gtacgttaaa agtggagaaa tggcttccat gatctacacc ttgctctgct cccctgagaa
      121 gaaggagaat atttgccctt taaaactagc acctgagctg ccacctgcat ttgccaagta
      181 cttgctgaca gctgtgagac ctgctatatc tcaaaaagag gcaaaaataa caataaacca
      241 gggatataac aattttaaac ccaaagcttt ttctctcttt tttcctcact ctgtctccaa
      301 gtacaccttt ccagctcatt actgcaaatc atttgaattc cagcacacaa tgtcacctgc
      361 actgtaatct gattacttta tggaggaatt agtatgtata tttaatgtag aaaggtttta
      421 atcttgatga aaataatcct aaggaactgt gatagggctg ctcatatgtc tggcagatat
      481 gccagtaaca tgctaataaa tgacagctga tttatgtatc tggattcttt tatttataaa
      541 aatagcaagt ggactgattt ttgatattaa taatacaagt gaatccactt tgattagact
      601 tctgtagaga gctgtgcata ttcggcatta caattaaatc ttatgatgtg gaatgggaat
      661 gacatgctaa tgaagcaagc cagtgagcct gaaccaagaa tgtccaacat cattatggga
      721 tatcttagat gaagagtaat tataagagga a
//
LOCUS       KCPA01000870             805 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 95382tic ultra-conserved element locus
            uce-4819, sequence.
ACCESSION   KCPA01000870
VERSION     KCPA01000870.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 805)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 805)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..805
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="95382tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>805
                     /note="ultra-conserved element locus uce-4819"
BASE COUNT          206 a          189 c          169 g          241 t
ORIGIN      
        1 gcagggtgtg ggagctccat gggttatctg cactgcaaat gaagccacat aatatctcac
       61 ctgcacctac cgtgggacat ttcagtgtga ccttttgaaa tgtacataaa atactgtaga
      121 tcatctcctc tcctgagggc atctgtagca tgaaactgaa ggtggcctca cagttggcga
      181 aaagtgtgtg gggctttctg tttacattta tttgtgtaca gacactggct tgtttgctgc
      241 tctaaattac tgccctctgc attttacctg cactgctgtt tttttctgat aaacttgatg
      301 agttgaaaaa atccttccat gtcaattctg cagttcatat tcatgctgag attgtatcta
      361 attttgaaaa tcttcacact tgtgccctgc catcatgtgt aatcttttat gcatggctac
      421 ctccactgct gctgaagcag ttgctatgcg acagatgaac ctgctccgtg gggccctgac
      481 attagtaaaa gcaaattgac cacaggagca ctaatctagc atgaaaagca gttggtgccg
      541 tgcatttcct agagaaggat tacctaatca acaagcaaaa cctcctttta aacgtgagct
      601 gaattacctg ggtctgggtt tccctgtttt gcaccttttt gctaccccaa atcaccctga
      661 agagtgaagc ccaaaggtgc attactcaag aggaacaggg actcaccccg atcagattct
      721 tcagctctca ccctggcctg ctggcaaatt tgtcacctgg gctgatagtt gtaacttttc
      781 tccaaggtta ccaaaaactg gtaat
//
LOCUS       KCPA01000871             502 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 95493tic ultra-conserved element locus
            uce-6753, sequence.
ACCESSION   KCPA01000871
VERSION     KCPA01000871.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 502)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 502)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="95493tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>502
                     /note="ultra-conserved element locus uce-6753"
BASE COUNT          151 a           93 c          116 g          142 t
ORIGIN      
        1 taacatctac tggtgatgct gaatatatac ctgcaaacac ttaaggtgca gtttttcagg
       61 ttctgccaca ctgagattct gaggaccccc ccagttcagt ttctgtttgt ttacaatctc
      121 ctgctgtgcc tgcaatatgc ttgagttgta cttaaaacac ataaatctgc cttcaaaggc
      181 agcttgggag gcaaaagtgt ggcttgggaa ttttaaatgg aagggacaag caatggctac
      241 aaagagctca ctttttagta gtaggtgttg cagtttgttc caattacagc acacattaga
      301 gtgtgaaatg ttcatgccaa tctagtaaaa ggaaaaagta cacgtaatgc tgaaattaac
      361 acctttggac aagtttcttt accctgcaaa tgcagctgag gcaggtttag agaaaagcaa
      421 acataagggg tcgtgggaat ctgacttgat aattggaccc ttccttggca gtcgaggaga
      481 agaatttaag agtgtactgc aa
//
LOCUS       KCPA01000872            1225 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 95604tic ultra-conserved element locus
            uce-564, sequence.
ACCESSION   KCPA01000872
VERSION     KCPA01000872.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 1225)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1225)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1225
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="95604tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>1225
                     /note="ultra-conserved element locus uce-564"
BASE COUNT          359 a          269 c          212 g          385 t
ORIGIN      
        1 ttaggttgat aatcagattt ataagccaat agcttataaa tggctaaaga gacctctgag
       61 acaattagaa acaccaagtt cttccaatgc ttacagggac aaagctgctt ccataacaaa
      121 accatttctg cctctcagag aagcaatggg caagtacagt tacacaagaa ggaagggaag
      181 gtcacagggc tatgtggtac aaaaaatgcc agaaatagat gctgatcaaa aaagcctcta
      241 atcagttcta aatttcttag acagtttgct ttcttgctgc acctagaaat gtgtcatttg
      301 tctattaaaa aacataacag cttcactggc tttcattggc ctctccccgt ttaatgtctc
      361 taacttcatg ccatgttctt ttcctctttc agcacggctg agcaaggctg acaggcggat
      421 tcctttgctt ttcagggtat taaagccact ttcccgctct gacagcctgt tctactctgc
      481 caccttatag ctctggcttc acacttctct gggcagccac tgcttcttga cagaccactg
      541 tcacttccca tcatcctctc tgtatatcct gttctctccc cctcagcacg catcccgact
      601 ttccaaccaa tgcaattatt ttttttgaca agccatccat cagctttaac tttaaaagca
      661 ctttccgctg atatccattg ttaaatccct tgctttttat ggagcttgca tgagagaata
      721 tgatatcaga cattcaaact accaaaccat gtaaatttac tttgttctca gctatgtttc
      781 caatttcacg tccaattttt cggtacatta tgcgtagttg ttgtgcttaa tatgatgttg
      841 tcaaatccca ttaaagttca ctgcattgca cggctttaaa aacaggttac aatttgcatt
      901 ctataaagaa aggaaggagt gcagtctgaa gtcaagctga atcttattaa aattatctgt
      961 tcaattgtta catttgtaga tggagtaatt ttgaggcatt agctgagaca catatgaaaa
     1021 tgtcagtgtg ccaactaatg acaatgaaag caaaaggaat atatctgtga aactcaataa
     1081 agctcctttg ctggtgacat aaatttgatg ataatccgag gaaatgaata agggaccatc
     1141 cagtttgaat aggaattacc ttttctatta aatcactttg ctgtatttcc acttggccta
     1201 catcttggtc ctatgccaca atgag
//
LOCUS       KCPA01000873             635 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 95713tic ultra-conserved element locus
            uce-3073, sequence.
ACCESSION   KCPA01000873
VERSION     KCPA01000873.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 635)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 635)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..635
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="95713tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>635
                     /note="ultra-conserved element locus uce-3073"
BASE COUNT          190 a          147 c          132 g          166 t
ORIGIN      
        1 atcatttaac cctctctcct tcagggaaac acattccacc tagaaagaca tcccagaact
       61 ttgctgtaag cagccactca gtttctgcag gagcagaaac aaaattcaaa acaggatctt
      121 gctcatagat ataagataga tttgaggttt gtgaactggg aagtatgacc agctgcaaac
      181 agcaaaggtg gaagtgaagc actacggttt aatgttctat ctagcgcggg ttaataattc
      241 ttcttttccc tgttttggtt aaatgaacat tctcttacca tttgtctggt ttgtccgtgg
      301 ttaggcagac ctaacaaaca ggaaagagaa tagagctggt aagaccattg cttttccaag
      361 acagaaaaaa gtacaaaatc aaaacacacg cagctatgtt tacaactgtg ttgttttgcc
      421 aagcctaagt tgcctactga actgacttct gcaaggtgac tgagtggttt gaagagcaga
      481 ggccccaagt acaaacatgt tccacttgcc cagtcccttc tccatttact caaaccttgc
      541 ctcacagtac ccacaccccc tcgcggctgg ggtgacgttc tcctactgac gtcaagaagg
      601 agaaagtgga aggcattatt cactgtcaag acagc
//
LOCUS       KCPA01000874             777 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 95825tic ultra-conserved element locus
            uce-6113, sequence.
ACCESSION   KCPA01000874
VERSION     KCPA01000874.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 777)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 777)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..777
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="95825tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>777
                     /note="ultra-conserved element locus uce-6113"
BASE COUNT          251 a          161 c          140 g          225 t
ORIGIN      
        1 atttttagag ctcagatgga aaacaccaac ccgaatatgt tttgaaacac aatttccaca
       61 ctaccttaaa aagcagctgt ttgtagaagc atggtttaca ttaatcagta cctaacaatt
      121 ttatatacaa cctttctaaa attcatttgc ataatgataa tccgcatatg gcagggttta
      181 agttatttaa gcggtgttat atttcactat ttagtcttgc ttcaccactg ctttagcagt
      241 gaatccttct ggagtgtaat gcagctaatg aggtagcttt ttaactgaac aaactgacag
      301 gtcccatatc tgcagaggca gcttgaaacc gtgcccaacc tctcggcttc ccaagaggct
      361 tttcaaaatt caataaataa catctgtagg cgatgttggg tgcagaccta gcagagtgcg
      421 tcataacact gagctggcag aacaaagaaa ccatgacgac tgccaagttt ccatggcaac
      481 cgctgcgagg cttggagagt ataatagcac atcaatcatt gtccaaaaga acttcattat
      541 cagcaagcct ttaggatctg tttagtgtgc aattgtgggt taactcacct caaagccttg
      601 ctctctagca aaagcggcag cttcctgaaa taataaaaaa agaacagtta attataaagt
      661 gctagataat gaagaaataa cacattttga aactcattca gccagttttc ctcttacacg
      721 attatctcaa tatagccata tatagttgtt caattctgat agtcgcacca aaagctt
//
LOCUS       KCPA01000875             806 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 95937tic ultra-conserved element locus
            uce-129, sequence.
ACCESSION   KCPA01000875
VERSION     KCPA01000875.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 806)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 806)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..806
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="95937tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>806
                     /note="ultra-conserved element locus uce-129"
BASE COUNT          263 a          127 c          141 g          275 t
ORIGIN      
        1 tgcttatgaa catgttagaa agctttaaat gccacttttt tgcaaacaga gacttctgaa
       61 tactctcatt aatgaagtga aaaaaagtaa tagctctcct aaggaatggc atttaaaagg
      121 agtagtgata aatatcagaa acaattcaaa agagttgaag aagttttaag cattatcctt
      181 ttcagcatgt ctatcaatag aaagctgaca atagtattat tgctatttac atattggtaa
      241 cacactggta tgaatttgca taacgtattg tagttctgtg ctctagggac ttgcattgta
      301 acatattggt gcttaatgaa ctctgaaaaa attgattttc cacagagtaa attaaggaat
      361 gcattatagc tgttaaagca atcttaaggg aaatctgagg cttctactgc agcaccgtgc
      421 ttagtaagta ataaattaca tgttatactt atttgcctta attcatgcta attttgtcca
      481 attaatgtat cacagtaatt cagaagcctg tcacaggaga gctaattatt tattggattt
      541 ttgtgttcag ctccctagga gtctactagc aaacaaactt gcgactgtct ttctattagg
      601 tccacaatga cattcttatg tcttactggg gaaagaaaaa gaatgttatt ctttgtttca
      661 gttatataaa tggatcatta ctcatttttg tttacaaatt ggtgtcacgt catgacagac
      721 tgttaggacg aaatccaatg tttttcctct tccagtaaat gcctgaacat gacataattc
      781 ttctaaaaga gcatggcagt actttt
//
LOCUS       KCPA01000876             454 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 96041tic ultra-conserved element locus
            uce-1204, sequence.
ACCESSION   KCPA01000876
VERSION     KCPA01000876.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 454)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 454)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="96041tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>454
                     /note="ultra-conserved element locus uce-1204"
BASE COUNT          109 a           94 c          121 g          130 t
ORIGIN      
        1 tctgttgttg accttgggca aatgagcttc ttgccctggc agaaatgaaa tgaatgataa
       61 atgtagagag tgtctttgct gagtaatgga gctgcagcat aggctttcca cagaggtttt
      121 ctcctgcaca gcccgaggca gcccgaggac ccctgctgtt catttaaata ggtatgtcaa
      181 atctgcctcg aaacgccgct ggtttgatct gtggtaatat ttgtgaaggt tccatatgga
      241 cttgagcccc ctgcagtgct aagaaataat gtacaacgct tcatggtgca gacgcaaatt
      301 ttctctgaaa agggatgcag tgctgcgttt tagctgtcgg agaggatgat ggagctgacg
      361 cgctaggcct gtcaacttgt tacacggatg ggttgcacgc agcaaggctg tggaaaatct
      421 gtgcctttta acttttctac ttaatcacgg ttgt
//
LOCUS       KCPA01000877             496 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 96144tic ultra-conserved element locus
            uce-5415, sequence.
ACCESSION   KCPA01000877
VERSION     KCPA01000877.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 496)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 496)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="96144tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>496
                     /note="ultra-conserved element locus uce-5415"
BASE COUNT          174 a           86 c           87 g          149 t
ORIGIN      
        1 gaagaggaat tctccttcca tatcttcctc tgaatttgtt tcatgtcact ctgaaagagt
       61 caagagatca agatttaatg ttctaataaa ccatgcattc tgaagtgaga cctctgaaat
      121 gatactgcat catcagtaaa gtgaatccat cagatatcct atacatcaca gtgaacaatt
      181 tcaaatctca tcttcctaca gcactcaaag tgaaatgaag ctgaatagaa caaatcctga
      241 tttttcacat ttgctgttat taaagaatgg aacaaagtag tgccaagggg aataagagaa
      301 taaagctatg gctattcagt tgtgaagaaa gtaaattaat aatactaact tcaattcttt
      361 tgtacatgat ttcaattgat gccctggaga acaattcctt tatagaaatg gggaatggac
      421 aatggaagct attgctgtat cttgcctcag tgctattgac aaatagtata tcagcatcag
      481 actacaggat gtcata
//
LOCUS       KCPA01000878             642 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 96253tic ultra-conserved element locus
            uce-3792, sequence.
ACCESSION   KCPA01000878
VERSION     KCPA01000878.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 642)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 642)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="96253tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>642
                     /note="ultra-conserved element locus uce-3792"
BASE COUNT          184 a          132 c          141 g          185 t
ORIGIN      
        1 aaagaggagc ttcttctgtt tacatatttt aatgtgttct ttccccaccc cctcttgtct
       61 tgtctgttcc tcctgtcaaa taaaggccaa gaaacaccag gtctttctaa cagagacgta
      121 tgaaaacaac atgagagagc tggagttact cttggacagc tttgctatgt caggccagcg
      181 gacagcaggt tagttgaagg tataaaatga cagatgcatc tgtcaatgtt ccaaagtcac
      241 tacattgtgg gaattctgca gatgcctctt gcattccctc ttctcaacat gctttgattt
      301 gatgacatga taagagcagt tctcacagca gtcaaatggc cttgctagct gagaaagggt
      361 gacggaaggt ggacctgctg ttgtcagccc agagcttgat ttacaaatgc tggggtgtat
      421 atgatcggtc agaaaagggc tcacttgctg tgctctaaat ccaactgaga aaaaagtcct
      481 tacagtatac ctgcaaaggg aacagatgtt ttgcctgaac tgagccaaat tctgaggcaa
      541 ccttcagcaa cttaaaggtc atatattcaa aaaggttgtg taggacacat gatgcaacac
      601 aatacttttt acagttgatt gtactatgtt gcgttcattt aa
//
LOCUS       KCPA01000879             720 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 96365tic ultra-conserved element locus
            uce-4550, sequence.
ACCESSION   KCPA01000879
VERSION     KCPA01000879.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 720)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 720)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..720
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="96365tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>720
                     /note="ultra-conserved element locus uce-4550"
BASE COUNT          223 a          137 c          131 g          229 t
ORIGIN      
        1 ctgtatcatt cacagctctg ggtaacagca agagactgtg ctttcctatt gctttagtga
       61 gtgtactctt caaacattta ttgtattgca ggggataaat aatgcatatg agggaagaaa
      121 atttacatta taagttgatt aaactgctta acagttttta gccactctct aaataaggaa
      181 gccagattta atctatgcag tgtttcatgt ccaaagaact agcatttaat ctctgtttaa
      241 ctgaaattta gttagcaatg ttgacacctc tgcattttaa cactgggatt tctttgtgag
      301 acacaatccc tttcactcaa cttaatatcc catcttggtc tctaagggaa aataattgag
      361 tttaggctag ttctaaatag cgataaggac agggaacaca gatgggtatt tcattgatta
      421 acactaacac tggcctaagg ccttggtgtc aggcattaga ttaggacatt actaagagaa
      481 tgacagagtt ttggcacttt attcctcctc aataacattc tttcacatat taagtttatc
      541 ccaccctagg tagctacttt atcatgcaga aggccttaat ccactgatgt gactctatct
      601 gctttcactt tgatgctgcc tctgtttaca agagtaatgc agcctgtgta agacaaagta
      661 ctcgtgacaa gaacaactga ataaggcttt tagatgcaca gagctctgac ctaaaaaaaa
//
LOCUS       KCPA01000880             793 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 96477tic ultra-conserved element locus
            uce-7958, sequence.
ACCESSION   KCPA01000880
VERSION     KCPA01000880.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 793)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 793)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..793
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="96477tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>793
                     /note="ultra-conserved element locus uce-7958"
BASE COUNT          268 a          154 c          127 g          244 t
ORIGIN      
        1 taaaatatat gcttaaaaca gatgggccat tcaatctcag caatgatatt ctttaatgct
       61 aatttttaac aataaaagaa acactatcct cccacacaca aatagccata attatgtaaa
      121 gaatgactgc ttcagactga tgactttcaa tatgcttgag tctagcatac tggtataaga
      181 ggccagaaag gtcaacagta attcataact gctataaaat tgtgtagcat cctagggctt
      241 ctggaggatg ctgacattat catgcttctt ctgctggttt gtatatgtaa atttgtgata
      301 ggaagtgcac tgctttgcca tatcgcatgc agagcatcaa tcaggcagta gaatacatca
      361 gagtattttc attatgccta gttatttact gcatcagaag aaattaccct ggcaagccaa
      421 gcggccttct ctggatagca tgatatgacc aaccaggttt cagctcagaa gtcttgtaaa
      481 cattacagga ttaatctcac aatcacaatc atcaatcttt cctagtcctg cccgggtgca
      541 actgcggaga ttggtaacca ggcaatgtag atttaaattt aaccctgaac atcaagagct
      601 atatgtcaga tccatgcacc atattacaaa cacctatatt tttactccag ctttagtaca
      661 aaatgatgaa aacgtaaaat ttttgcactt caaattcatg tctaattttt cattcccatt
      721 tttgatgcat tacagcaaaa tatgaaatat tctgaaaaat atatatttca taataccaga
      781 atctaatgtt aaa
//
LOCUS       KCPA01000881             397 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 96583tic ultra-conserved element locus
            uce-1065, sequence.
ACCESSION   KCPA01000881
VERSION     KCPA01000881.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 397)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 397)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="96583tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>397
                     /note="ultra-conserved element locus uce-1065"
BASE COUNT          140 a           65 c           81 g          111 t
ORIGIN      
        1 ttttgcaaga gggctggtag tttcattaat aaataatttg aactaagggg aaagaaaaac
       61 cttcagagga ctgcagtgtt aggcacagcc tggccacgcg gttcaggagt tcacctctcg
      121 acgtggggca acataaactt ttggaaataa atgtaaacaa tggcaatgag cttgtaattt
      181 atattttatt ttgcacaagc ttgcatatat actgcacata cattcagttt agagaagatg
      241 gaaggcacac aaggcaattg aactactgta tcctttaagt ggtacaaagc aaaaaggtaa
      301 aagtctggag agtatacaaa agctttaaac acacaaaata aaatccattt tcctgtgttt
      361 atcttaaatt tagtagctgc caagctagaa ttgtaac
//
LOCUS       KCPA01000882             582 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 96692tic ultra-conserved element locus
            uce-1354, sequence.
ACCESSION   KCPA01000882
VERSION     KCPA01000882.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 582)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 582)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="96692tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>582
                     /note="ultra-conserved element locus uce-1354"
BASE COUNT          145 a          117 c          146 g          174 t
ORIGIN      
        1 aaaattgaaa tatttgtgtt tccttttacc tgaaggggaa gttgctgtga agtttttccc
       61 ttctttctct ccagtgggct ggcaatcagg tgttgtgctg ggggagttac atggcataat
      121 tcccacgaat gtaggaggag gatgaaaaag ataaagaaat tttgtttttc tgagctggag
      181 gattctctgc atgacttccc cactgatggg atcatgtgct ttcaggctga gattttatta
      241 acaattcaaa tggaaattga gggcacagga ggagcagatt ctcacataaa cttgatctgt
      301 ccatgaatgc agttctctgt ttgccctgac cctgcatggc ttaagacact gcctgtgagg
      361 cctgagtgcc agacacaaag accgaaatga aaagcaagca cattccagta gtctgcacaa
      421 aggcaatgga gcagtttcca gccgtctccc cagggagaga tcttatctcc ttctaaaacc
      481 ctttagagtg tttatttgtg ttctagcgcc cgaggtttat tgatatggat gctgattggg
      541 agacgcggag gtttctctcc cggatatttg tcgctgcttt gc
//
LOCUS       KCPA01000883             539 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 96803tic ultra-conserved element locus
            uce-5739, sequence.
ACCESSION   KCPA01000883
VERSION     KCPA01000883.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 539)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 539)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="96803tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>539
                     /note="ultra-conserved element locus uce-5739"
BASE COUNT          168 a          100 c           96 g          175 t
ORIGIN      
        1 tgttcaatgc aaagctaatg tctgttttgt ttacaaaaaa ttgaaatgta ccttaaatgt
       61 gctatagtgc cttggacaga tggagctttc tctagtcaaa cctcatcttg aaagatactc
      121 agcttataga gctgaagcat agttggtggt gcacttcatg tccttcatgt aaaatattct
      181 gtcactttta attttgtacc ttgtttactt tctctgttac aaaagaactg ggacttgttt
      241 ttagcagctc tgattaagtt tctattgatt ttcgagatag gaaatggaac tttcagattt
      301 cccacatgaa tttaaagcaa gtcagatatt aacctcgagg taaaacatct gccatgacat
      361 tccaagaaca gacaagtact atctcactga aaacagcatc tgtgctcaaa tctcagtgcc
      421 tgggagttgg aattggaaaa agcagcagga ctgtattttc acatgtgtta cacatgaaca
      481 tactgacatt tacaagatat ggattactat gtacacaccc cttaaagcac tattgacta
//
LOCUS       KCPA01000884             529 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 96913tic ultra-conserved element locus
            uce-2795, sequence.
ACCESSION   KCPA01000884
VERSION     KCPA01000884.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 529)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 529)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="96913tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>529
                     /note="ultra-conserved element locus uce-2795"
BASE COUNT          179 a          112 c           98 g          140 t
ORIGIN      
        1 ttttcagtag aagtgcaaag ggaggcgaaa gaaataacag caggaacatg aagctgaaat
       61 aaaaaaatgt agaatcacaa agaaaaccta aacaaataaa gtgcaaacag agagtgacaa
      121 gcgcactcag cccctggatt ggttatggat gagtcgacaa gtatatgatg aaattaatga
      181 ccctctgtca actttttaga tctcactttt aaagagaatg gaccaaaaat caatagcccc
      241 caaaccacta gtactccagt gaaccagttt atcatttatc ttactgctgg cactcatata
      301 gaaagtgcag ccaagcacag cataggactt tcattggtag tcatcattac aagcaatgtt
      361 tgagcactcc agttaaaggt caaaggtgtg cagtacagct cctctgagaa gtacctattt
      421 gaaattacca atatctgtgt atggcttatc catgctctac actattactc tatttttttc
      481 cccaccccca tgtgcatttc cctgttctga gctttacctt gaagcagag
//
LOCUS       KCPA01000885             790 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 97025tic ultra-conserved element locus
            uce-2781, sequence.
ACCESSION   KCPA01000885
VERSION     KCPA01000885.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 790)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 790)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..790
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="97025tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>790
                     /note="ultra-conserved element locus uce-2781"
BASE COUNT          211 a          168 c          180 g          231 t
ORIGIN      
        1 taagtgcagg gatatgagct tcaacttctg tgaaacaaaa atacctctga cttttgtgtt
       61 gtgtagctgc agccttctgg gaattctgca tcttttcgga gatgcacaag ggcttagtgg
      121 tctcatttag ttacctatgt gcccctgaag aagccctgct agcaataaaa cactctggtg
      181 gcaaacagct aattcattaa ttaaccacag tatttgccgg aaaggaaagc actaaacaac
      241 gctgcagaga aagtgcaatt gtggttgttc caggtccctg tctgcaggat gtgcggcaga
      301 ggcaagcgat gcctgtgctg tttctaatta ttccaattat catggcacac tatgaaaact
      361 tgattaataa cactgaagat attgttgtgg caattagcca tatggttgtg ggactttatt
      421 ctgtcacgat ttagccatta gcatctactt atgtttgtca gaacagagca tccgtgacaa
      481 gttggagttc cgctcacctt gccgagtccc tggtgagcaa caccagagaa atgtttattc
      541 ctgggagccc cgtgcctgag taaatttttc atgtggcatc cggtctgact agggacaaat
      601 gtcaagtagc ttatgcgacg acccatcaag ccaggctcct ctgcaaaagg tgcctcgttg
      661 tcagggcaga cttctttcac aggaggattt gaccagtaaa attagtgtca aatgtcttgt
      721 attcaatgtt ttcaatgctt aactgttcag acagcatgca cctaccctta tttagatgtg
      781 atgaaatgct
//
LOCUS       KCPA01000886             841 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 97137tic ultra-conserved element locus
            uce-1573, sequence.
ACCESSION   KCPA01000886
VERSION     KCPA01000886.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 841)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 841)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..841
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="97137tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>841
                     /note="ultra-conserved element locus uce-1573"
BASE COUNT          270 a          143 c          157 g          271 t
ORIGIN      
        1 tcctatttca acatataaag tggcaagcca atttatgcag cttaaaccat tgctaaagaa
       61 gatgtatcaa aaattgcctg tgatctttac aaataacagc ctgaaatgtt cacaagaagc
      121 tgtttgctta tcatattttc attaaaacat cttttcacct gattttcttt ttccatgcct
      181 gtaacctgca ttgtaatcag tcttattaac tgagaacata aatatgattt attatggtct
      241 gataatggaa gctacatgga ccaagagaag ggatatattg tcctttgata aaatggctct
      301 tttctctcaa atagagctct atcatgagag catgcagaat gtagtgagtg attatttcct
      361 gagggtgaat gatggcagaa ccctacagaa aatcttcttg ttggccatga cagcctccga
      421 gtgtccccaa atctcactga gtttgacaac ctgcagacac ttttgatgaa ctgtattctt
      481 ctgtcagaga cagcctgtct gggaggagaa aagggaacct ttatcgtctg atctgctatt
      541 attgtcttga tcttttataa gcaatctcta atgcacatga atataatatc ctttcacaga
      601 agtgccaaac ataatagaaa tgtagttaaa ggaccctttt cccggttatg taaatgtcct
      661 aatgccataa ttagaaaaga tgggttgtga atgatagcag caaggaaagg gtaatcaaaa
      721 tgttttaaca ttatctttct gttttaaaga ccaaaatttg tgataaatag catttatggt
      781 agatatgggg aaccagcttg tgctgaagct tttacctaaa gaaaatagtt ttgagtgtaa
      841 a
//
LOCUS       KCPA01000887             536 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 97249tic ultra-conserved element locus
            uce-2049, sequence.
ACCESSION   KCPA01000887
VERSION     KCPA01000887.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 536)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 536)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="97249tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>536
                     /note="ultra-conserved element locus uce-2049"
BASE COUNT          119 a           84 c          107 g          226 t
ORIGIN      
        1 caaatggaaa tttttgtggc ttactcttgt gggccccctc gatcatgact gattttcaag
       61 tttgatttct ggatggtaga aagagagttg gttttgtttc gagaattcaa aactttggct
      121 tgatttcttt ttttcccttt gcttatatct agtgtttaga attttgtctt aacaaaagcg
      181 gtaagtttca ctttttattc tgtatcgtgc agttacacaa taaggtaatt agaattagga
      241 gtactcggtc actttgcgtg gataaatgta ttagttaaaa tgttaggggt ttgctttttt
      301 gctgtttaga tcagagtttt ttctgattct tctgtcctca ttgtgaacat aaccgtgtag
      361 ttgaaacagt cagacttatt tttgtaacgt atgttattgt gtgatgcagt tttttgcttc
      421 tgtctccaat attaaaccat tttcctaata cttgtctctc tactttgtgt gttgtattgt
      481 tggtggtcat tctgtgttgg taatacatct gcacacctca ctgtttcacg tgcctg
//
LOCUS       KCPA01000888             416 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 97356tic ultra-conserved element locus
            uce-3303, sequence.
ACCESSION   KCPA01000888
VERSION     KCPA01000888.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 416)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 416)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="97356tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>416
                     /note="ultra-conserved element locus uce-3303"
BASE COUNT          146 a           66 c           80 g          124 t
ORIGIN      
        1 agggaagccc actcagaacc attaaacaag cagctcagga attaaattac cccctgctat
       61 cataagcaaa taacctacat gggacattgt gttatctgac tgaccagtcc atgctttgct
      121 ttttccagct ttaagaagga aattaaattg tatggcagtg tattactctc atttccaatc
      181 ctctggagca gataaacatt atcatgaaac tggccaagga tgaaatttaa ataagtagtg
      241 attggagagg agaagagttt ccaaattaca aaagctgaca aattagttta attaactgca
      301 tattttggag tacaaggata tgggggaatt atttattttg atgtgtaatg catactcaat
      361 atttctgtaa aggattagga tatagaaact ctgctacaca attattaaga agtagg
//
LOCUS       KCPA01000889             564 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 97468tic ultra-conserved element locus
            uce-72, sequence.
ACCESSION   KCPA01000889
VERSION     KCPA01000889.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 564)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 564)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..564
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="97468tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>564
                     /note="ultra-conserved element locus uce-72"
BASE COUNT          185 a          121 c          102 g          156 t
ORIGIN      
        1 ggctgcagga gtgaccctga tccaggctgg tgtcacccac ctccctctct tctctatagg
       61 ggaggggtgc tgtgagggag tctcctgcca cttacccttc ttactaaaaa tagaactcaa
      121 atggagacag gaaagaatgc aaatactggc acacaaggaa atactgaatt acatattggt
      181 cgaccaaaac acaaatcaac tcaaaactac aggagtccac caacatgcac ataaatcatt
      241 tataacgata atccaaggct gggtccaaat ctcattaaag tatatgaatc cttaatctat
      301 tttggcaaaa aagagccaat acacattttt tctttttatc ataaattaca gttctgtggc
      361 actgtgcaaa tattaccaag ctgtaagaca gctgtgctcc attaaaatgt gtaatggtcg
      421 ctgatttctt acagcacatg gtcatcaggc tgaatctaca gccagtaatt aggaagatga
      481 aatgtttaat tgtgccttaa ttttgataaa atttatctgt cacacatccc gtagtcaagc
      541 agtatgctca caaatcaatg tcat
//
LOCUS       KCPA01000890             774 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 97581tic ultra-conserved element locus
            uce-5255, sequence.
ACCESSION   KCPA01000890
VERSION     KCPA01000890.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 774)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 774)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..774
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="97581tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>774
                     /note="ultra-conserved element locus uce-5255"
BASE COUNT          213 a          165 c          177 g          219 t
ORIGIN      
        1 caatcttact aggagcaaag ctctttggaa actttaaaac aaatgctctg cttttactta
       61 aagctttaat tttttcttct tttaaaaagg agcccttagg gaagaaatga agtaaccatg
      121 cacattccaa tgacatagtt atgacagttc agaggctaac tatgtagtga tgaatgaaac
      181 aaaaatgaaa catggaaaga aagagaaaaa ttccatgttt taaaataaac gaaagtaacg
      241 tacctgttgg gacattctga ataagaggtt agtgtcagtg ttctgccatg tccccatgaa
      301 accagagtcg gtcgctgccg ttcttgttcc gaactgcatg gagttgtcag tgcaggagtc
      361 tcttaaagtc aagtctcttg ccctctttcg ctctctgtgt ctctgtgtgt gtctgtctct
      421 cacatccact tctgcctctt ctgactgaaa agtgaaggtg gattttttga gcgtcttggc
      481 agccagtagc aggagtgtag tgtagttaag aagctagctg cactgtgcat ttcatttggg
      541 aaggggggat tcaggggaga gggtcagagc ttctttcgca ccttcagcag agagacccct
      601 atcatttatg catagattgt gactccccaa gctcgccttt gctcagttta acagctgcct
      661 gtcaggtgtg catgcagcac taaggagacc caaccatcag cttcaaactc tcagccactg
      721 gatgtcattg gatagcagag caaagagtca actgcactgc tccactgtca ggca
//
LOCUS       KCPA01000891             738 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 97692tic ultra-conserved element locus
            uce-5845, sequence.
ACCESSION   KCPA01000891
VERSION     KCPA01000891.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 738)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 738)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..738
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="97692tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>738
                     /note="ultra-conserved element locus uce-5845"
BASE COUNT          253 a          133 c          137 g          215 t
ORIGIN      
        1 atttttgtag gagctataaa atttgcttgg aagcattttg cttaaagata ctactccaag
       61 aaaacaatga agctacaaga ttatatttag ggctgtctgg taccctaaat atggtcattc
      121 tagtgcttaa aaatcataat cacttcaccc tgaacatagc tctgaaattg cttgactcta
      181 caataaagca aagcgaagct ttctgttaac aaaggagcac ttacctgtaa tcatagttag
      241 agctgataga cttgctaagg ctgggatatc aaggttaagg ctctttaagt ttaaggaaaa
      301 gtctttaata gagtcgagcc actccccaaa tccacgaagg cactgaagtc tatgaagcac
      361 gagtccattg cagaatacaa acttatcctc agcagtatca gacctcaaat aaaaacaatt
      421 gaaaaaatta taaatgcatc ttctacttta cagaaaaatg cataaccagt attgaagtgt
      481 ctgtcattta aaatccaagg catattatcc tgagacatat gtgggcattc acgtttgaca
      541 atatgtttct cccttggggc caaagtacaa caaacaagct tctgtgattg cttacttggt
      601 agagttataa gcctgaggtt agctgtagca tgtggtgtag actgtctaat tagttaagat
      661 tttggtcctg cccaaaggca taaacagaga agacattttg cattaaatac tgtatgtttg
      721 aaccaaaaga atactaag
//
LOCUS       KCPA01000892             570 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 97802tic ultra-conserved element locus
            uce-4395, sequence.
ACCESSION   KCPA01000892
VERSION     KCPA01000892.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 570)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 570)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="97802tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>570
                     /note="ultra-conserved element locus uce-4395"
BASE COUNT          172 a          117 c           96 g          185 t
ORIGIN      
        1 tttttacctt tgttgatagg ctatgcaaat gttccacaat attgcttctc aagctgttac
       61 aggtacaagc tatctagata tttagataat acagtatcta ataggatgtt atcaatcttt
      121 tatagtaaga gaatacataa attataaaca aatatgtcct ttggtctagt ggaacagcat
      181 aatgatcaaa gacacacaat agaaatgtat ttgcttctac agtaagcttt attccctcag
      241 tgctcagtcc atagtgatgg acaggctgcg agctgtcagt ttttgttctg tctgtcacac
      301 tacacttacc tcctgttgtt ttaagtaatc aatatggggg ctgaaatcac ctaccactac
      361 ctctgctacc tactattttg tccactcata aattatgaat ccctgcacaa cgtcaagtct
      421 acaatttcga ttgcatttgc taatcattga tcaataattc aaaagcctct tcttcttcaa
      481 gggtccctag cttcctggaa catatggcaa aaggctgaca gtgttcacaa aactattccc
      541 ggagccaggg aaaacaagtt gttggaagtt
//
LOCUS       KCPA01000893             656 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 97914tic ultra-conserved element locus
            uce-6954, sequence.
ACCESSION   KCPA01000893
VERSION     KCPA01000893.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 656)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 656)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..656
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="97914tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>656
                     /note="ultra-conserved element locus uce-6954"
BASE COUNT          121 a          181 c          222 g          132 t
ORIGIN      
        1 acgcttcgct gggcagcggc aggtgggtct tggaggaact gttgcagtgc tggacctcga
       61 tgatctccag ggcggtcccg tcctggccat gccgcaccgc gccgttgaca caagcaccgg
      121 gcttgggctc tatagtccgc cgccagccct tgccgggctc cccgttgcct ttcttcgcgg
      181 tggccggaga gagagcgagg caggtgtcgg cgactttttt cttctctgtt ttctttactg
      241 tcttgcggat cctaaagcgt gccgccttga agatgcgacc gtagagcacc agcatgagaa
      301 gaagcggaat gtagaaggcg ccgaaggtgg agtagatggt gtacccgtgg tccttgctga
      361 tggtgcaggc gtcggggttc gagcggtcct ccggcgtcct ccagcccagc atgggcggga
      421 tggatatcaa gaagccgata agccaggtca ggctgatgag cacggccgcc cgccggggag
      481 ttcgcttgtt aacatagtca atggggtccg tgatggccca gtacctgtcc aaggcgatgg
      541 cgcacaggtg cagaatagaa gaggtgcagc aaagcacgtc cagcgagatg aagatgtcgc
      601 aggtgacctg ccccagcgtc cacttgttca gcacctggta gagggccgcc atgggc
//
LOCUS       KCPA01000894             799 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 98026tic ultra-conserved element locus
            uce-4638, sequence.
ACCESSION   KCPA01000894
VERSION     KCPA01000894.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 799)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 799)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..799
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="98026tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>799
                     /note="ultra-conserved element locus uce-4638"
BASE COUNT          241 a          156 c          131 g          271 t
ORIGIN      
        1 gtgcatcagg caggacatgc acccctggat gcacagaaac atccaagtca ctttttactg
       61 cattggatca ggtgagagca gtgaattttg tcagaacgat attcaagagt ctttacatgc
      121 cccactttgt tttgttgtca tatatttcca agtacaaagt gcagtccatc acaataatat
      181 tttcaataaa atttcaagaa aatgagatga taacaagacc atgatatttt aaattgaatg
      241 aatttcaaga tagttaagaa ttagactccc agaggaatac tttatgtcac aagctatgaa
      301 cactactgtt taatgtacac tcatgctcca tctgtttcct tttccattat tcgaatctcc
      361 taaccagttt ctcatgcaca cttttcagct ccatgctgtg ttttctattt attgaataca
      421 tttctcactt caacattttt ccacctgagc tggcagttgt ggcttttatg gccgtacaca
      481 tgcaggtctc cgtagattat gaacttcata ttttttcatt tgcctcatgc ttcagttctc
      541 taacttagta ggccctaaaa tgtgcaaatt gagaggtgtt ttgaagtaac cgttgctatt
      601 ctaggccatt gacttgtcat caattagatt aaaacattgg tttacaaaaa taatgttttc
      661 tctttacttc ataaaaaata aaacacttgg aaaaggaaac ccagctgtgc taagaggcaa
      721 attactttat gggagtaagc aaacattttc tggtcagagc tacaatgtat tattcagggc
      781 cattttacta catcagttt
//
LOCUS       KCPA01000895             651 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 98138tic ultra-conserved element locus
            uce-2551, sequence.
ACCESSION   KCPA01000895
VERSION     KCPA01000895.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 651)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 651)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="98138tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>651
                     /note="ultra-conserved element locus uce-2551"
BASE COUNT          219 a          119 c          111 g          202 t
ORIGIN      
        1 ttttggagat ggtagtccaa tttctaactg ctttcataat gtattaacca aaatttacag
       61 tctatatcct ttttactcgt taccactgtg atagatgttc taaatccagt cactgtctaa
      121 aaggatgcag tagcatttta aaataatata gctaatatga aaccctaaat tctaggaatt
      181 ccatttacag gcaacctaga aaacagaagt ggttaattta taaggaagca cagaacaaag
      241 gtaaggcact tgccaacaat agtttgttgg tttaactttg acttgctttc ctgggaaaga
      301 agaaaacaga attttcaatg tgaactgtca gccccactta tgacagggct tcactagtta
      361 ggaattcaga gttcctcctc cattggcaga atgatgtaaa gaaaaccacc aaacaaaatt
      421 ctttcaagtt tcaactacaa ctctacttaa ataatttact ttttagtttt actcagacta
      481 ttctttttaa acttagttga cattttcgtt gacaagcaca ttttattgca caagatcagt
      541 agtggaattg gcagtgaaaa agagagagct ggctctactc aatgagagaa ctactatctt
      601 gcctttggga aaaacagtgc tggcagtgac cctttctaaa gccagcaata a
//
LOCUS       KCPA01000896             457 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 98246tic ultra-conserved element locus
            uce-8016, sequence.
ACCESSION   KCPA01000896
VERSION     KCPA01000896.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 457)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 457)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..457
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="98246tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>457
                     /note="ultra-conserved element locus uce-8016"
BASE COUNT          131 a          113 c           76 g          137 t
ORIGIN      
        1 gatctgccaa acctgtggag aaagcctcag cacaaggaat agtaaaacaa gatgaagttt
       61 ccatcaacac caaataaatc catgactgcc taaccatagt gaatttcttt tcatattctg
      121 aacacaagaa aagataccct catgtcctta ccctgtgatt tcctcatgtc ttttgtggct
      181 aaagcacgat tcccatgcgg aacactggta aaatcaggat tggtcacatt gttaactctc
      241 agctcttgcc ccaacgactt ccgaccataa gtattttccc cagatcctcc attgacactg
      301 tagccacctg tggacaaacc aattagcagg gtggtgtgtg agttattcaa aattagcagc
      361 tcctttagct tcctttttca cttccacatg taagtttcca gatcagactt agaatctcac
      421 cgccatgaag ttcttttgtt gcatttgtta ttattac
//
LOCUS       KCPA01000897             543 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 98355tic ultra-conserved element locus
            uce-1351, sequence.
ACCESSION   KCPA01000897
VERSION     KCPA01000897.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 543)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 543)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="98355tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>543
                     /note="ultra-conserved element locus uce-1351"
BASE COUNT          193 a          109 c           81 g          160 t
ORIGIN      
        1 atgataatac cagaattcac aagaaagagc tgtgagcctc tagcacttac cagctgtaat
       61 actgaacaga ttacacagaa aaatcaggca aaaaaaagta atatgctttc acctcacagc
      121 aagaaacgct gaagttcagg aagaggaaat gtgtattaag agagcaggtt aaaaatctac
      181 attatcccag actttcatga aatcaaaatg ataggcacga tgctaagtta ttataatgta
      241 tttattacca gaattgcttt catatttaac tgatttggcc catcttgaga cctgttttaa
      301 aatgcaccac cttgtccacc tttccatttt catatgaaaa acaggaaagc aaaaactaat
      361 ttactcaggg agacacatcg actgtttgcc cgtttatctc ttacagacca cccctcagtc
      421 caatgttgac agtacatgat attccattaa tctgcctaat gaaaatttaa ccagtgttat
      481 aaacaaataa ttggctatta tcctctcaaa gatcccgaat aaattacttc tgcttatttt
      541 ttt
//
LOCUS       KCPA01000898             774 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 98467tic ultra-conserved element locus
            uce-2016, sequence.
ACCESSION   KCPA01000898
VERSION     KCPA01000898.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 774)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 774)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..774
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="98467tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>774
                     /note="ultra-conserved element locus uce-2016"
BASE COUNT          224 a          124 c          163 g          263 t
ORIGIN      
        1 atgaaaagtg ataataaata aatggaacaa agctgtgtat gcttttgggt tatgactagt
       61 tgaagtggag attaaaagct ctgaactgat gcatggaaac aaaaatactg aattcatttt
      121 aatcttctgg tttaagtggg tgtgccttca cttctgggtc tagaaataat catacttgta
      181 tcaatctata ttgtgtgact tttgtaagct gtgaaaatag tatttttcac tgaattgtca
      241 cttattattg ttcatttgtg gccactaaca tagaaaaatg tcgcagctac aatgtcagaa
      301 gaatagggac aattcgatgt tttcttttga tgctgtttgt tgatacctag accactgcag
      361 cttgattgcc taacattaaa cctataataa cagtgcaatc atagcagtat catcatgaat
      421 gtcgttacaa tagaaacaac atttacacgg cttcagaatg gtaattatca aagtttttgt
      481 catgaagcgc ttatttgcta gcattgatct gccccggtca gttgttagct cttctcatct
      541 gaggtgtatt gattgtataa tcagtagata gaggctgcgg gcagatgaaa ttcagtgttg
      601 ttgggcaaat tattgtctgc ttgcctgttg acctggaccc tgctggttgt accttagaca
      661 gtggtgggat tattactcat ttcagtgacc ctactctgac agagaactcc atattattat
      721 aaaagataaa tggcatcctt ctttactgtg ggtatggttg aatgcaggtg tcag
//
LOCUS       KCPA01000899             666 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 98576tic ultra-conserved element locus
            uce-2775, sequence.
ACCESSION   KCPA01000899
VERSION     KCPA01000899.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 666)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 666)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="98576tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>666
                     /note="ultra-conserved element locus uce-2775"
BASE COUNT          201 a          108 c          108 g          249 t
ORIGIN      
        1 ctgtctgtaa actttagtgt tagacacatt acctcatatg aagaaaaatg tgtaattcac
       61 ttattgacag agaaaagcca ataaatccaa tttgactcag gaagctgaga aatattttaa
      121 taactttctg acgttttcct gtagtcctta tttaccttat caatagttat ggtgacatat
      181 gattgtcaac tttttatatt aaaccaaact aataaattaa acatgttgtg tttatacctg
      241 atgaaagctg acgttttgga aaggtgttaa aatatactga caggtcttgt tcataaactc
      301 ctttggtata aatatgtaga tgacatcttt agatactgtt tgtacatagg ctgataggca
      361 ggaaacgttg acaacgtaac aaatgcaaat gtcaacccca caatttaacc tttctgtgta
      421 ggaaaagatg ttagttttaa gttacatgta tcttttaact ttattttcaa agtttttttt
      481 gagcctgtta tcattcctgt ttcatgtgcc actgaaagta acactgcagt aagaaagatt
      541 tgcacttaag agcttttctc tgcggtgttc ctacttaaat gactgcagct gagagggtgt
      601 ttttcttcta attctttttt ttttcatgtt tgcctagtac cttctgaatc tctcttcaat
      661 attatc
//
LOCUS       KCPA01000900             705 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 98688tic ultra-conserved element locus
            uce-5947, sequence.
ACCESSION   KCPA01000900
VERSION     KCPA01000900.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 705)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 705)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="98688tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>705
                     /note="ultra-conserved element locus uce-5947"
BASE COUNT          192 a          161 c          155 g          197 t
ORIGIN      
        1 gaccaattca acagcttgct tttaagtttc ccattgacag acaaactgca gggtttagtg
       61 ctaagctcca cattgcagct tatctctcct taattaaaat taaaatgtga gcaacaacac
      121 agagatattt tgcagcatcc tggaagagga gaagcagaag ctcgagtgat ggttgtttaa
      181 taagattata attggagagt taaagccttg tgatctatgt gcagactggt ttggtgctgg
      241 tgcggctccg tggcaggcga gccccaggtg cctggccaag catccctcgc cgacatctgg
      301 aaccagttgc aatacatcac tgtcaaaact gctttctata cgtatctgca tttacacatt
      361 agttactcac gcagcactca tcaaaaaagc tgaacaatct tgacacggtg tccctggtgg
      421 aacggcaaag gtgaaccgaa gttgggaggc agtgtctcgc gtcactgtct gctgagcttt
      481 tacaacagga agcctgatta aaactgaaag gaaaaatgta tcgtcagctt ctgctttgta
      541 tcatttttac ctacaaaaag agtattttgt ttcatacaaa gcagttggta atggggccag
      601 aggtgctctt cactttcacc actaccttcc ctgctttggg tgtctgatta gccacagaat
      661 tccctccttt gtgcccagtt cttgctctga aatacagaac ccatc
//
LOCUS       KCPA01000901             682 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 98799tic ultra-conserved element locus
            uce-5827, sequence.
ACCESSION   KCPA01000901
VERSION     KCPA01000901.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 682)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 682)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..682
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="98799tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>682
                     /note="ultra-conserved element locus uce-5827"
BASE COUNT          194 a          149 c          137 g          202 t
ORIGIN      
        1 catttccctc ttccctgccc agccccaact ctgagccccc atatcttgga ctttgttcct
       61 atactgatgg taaagattgt tttgtttctg tttcccctaa aaaaggcaaa aaggttagta
      121 agtctttaaa ctctcagttc ttatggctgt taatatttca cattgccaat agggaaagga
      181 attaaaactg ccagtagcta tccagataga ttttaaaatc cccttccctc ccccttctct
      241 ctgcctccct cagcttcaga ggatattttc cccgcaaatt ggttttaaat taaggaaggt
      301 gatgaaggca atgtgccgtc tcagcatttt cccaggtgca cttaatctaa tttcattaag
      361 gagatcagga cagatgatcg ctacagttga aacattaagt ctgtccattt ttgtataaaa
      421 aaaacattaa gtctgtcaaa gtgtcggcgg gtgggctgtt tattattgga gatgaaggca
      481 tgctttgctt ccccaataaa ctgtcaggag tagtaaacca caaattaagt cagccgctgc
      541 caaagattta ggcaaagatc tccaactaat tttgacacag gtgtggcaaa ggccaaacct
      601 tggaaactga gcctgtttga gatatttcaa tgagaccatc gaagagtgga ggactgggca
      661 tcagttgctg atgcttcaga ca
//
LOCUS       KCPA01000902             413 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 98905tic ultra-conserved element locus
            uce-1039, sequence.
ACCESSION   KCPA01000902
VERSION     KCPA01000902.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 413)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 413)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="98905tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>413
                     /note="ultra-conserved element locus uce-1039"
BASE COUNT          144 a           69 c           57 g          143 t
ORIGIN      
        1 acgaatctta tttttaattt gtatgggaac atttttacca caaattccat attttaataa
       61 tactatcccc actctatttt ttaaactcat tttgtcactg ttttgtaaca gaaacactgt
      121 aaatattata gatgtggtaa actattatac ttgttttctt ataaatgaaa tgatctgtgc
      181 caacactgac aaaatgaatt aatgtgttac taaggcaaca gtcacattat atgctttctc
      241 tttcacagta tgcggtagag catatggttt actcttaatg gaacactagc ttctcattaa
      301 cataccagta gcaatgtcag aacttacaaa ccagcataac agagaaatgg aaaaacttat
      361 aaattagacc ctttcagtat tattgagtag aaaatgactg atgttccaag gta
//
LOCUS       KCPA01000903             694 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 99017tic ultra-conserved element locus
            uce-4725, sequence.
ACCESSION   KCPA01000903
VERSION     KCPA01000903.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 694)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 694)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..694
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="99017tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>694
                     /note="ultra-conserved element locus uce-4725"
BASE COUNT          187 a          159 c          110 g          238 t
ORIGIN      
        1 ttattcactg agcagcttta aaaggaacat attaatttat ttcagcagtt cctcaaggga
       61 gaagaacagt tgttaatgat cagtttaggc aacacacatg accaccttga aaagaacaaa
      121 cgctaattag catcgcctac aattcctgtt tccaaaccat actttttaac ctgtacaccc
      181 aatcttttcc aatatttcca ttaaggctgt caaaagcaga agtttgggaa cctttgcttg
      241 tgaccttggc atttcttctc aggcttaacg tattggcatt ttttcctctg actgcatcgc
      301 ttctcatttg tcatgattat tgttgaattt ttcaactgtc attcccgaac gtaaatcaat
      361 ggttgtcgac ttcccctttg tcatatctgc actgccaaca gcctttccct tctaaatgag
      421 gcttcctccc tttccatcca ttaaaaaagg cctgtctttt ggagaagtca atcctttgtt
      481 aggtcactcc atttatcatt cttccaatca gtacctgaca tacttattca gccaggtctt
      541 caaccacaca atcattgttc attttaggag agagagaagg gggtatttca tttatgcatg
      601 gtgatttttg ccatttatct tgaccagttt tatatccctt ctatctttag gggtccttac
      661 ttgcttgaag gaaacaccaa actcagtaga ataa
//
LOCUS       KCPA01000904             389 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 99119tic ultra-conserved element locus
            uce-6659, sequence.
ACCESSION   KCPA01000904
VERSION     KCPA01000904.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 389)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 389)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="99119tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>389
                     /note="ultra-conserved element locus uce-6659"
BASE COUNT           95 a           80 c          111 g          103 t
ORIGIN      
        1 tttttaccat gtggacttaa ttgagcatgg ggctaaatat attataaaat acgtttgcaa
       61 cacgtggggt gttttcagga tgttgtggtg cagcagagca gctgcattga gctcgctcag
      121 gcgtaccaac gtttacaaat ccagcagcag atgttacagg ctcagcgtaa cgtttccgga
      181 cccatgagac aacaggagca gcaagtaggc cctgccagct caatctctgc tttggggttt
      241 ggtttcagtg caccaaagca gctaaagcat ccttaacgca gtgcgagtgc tgcacaggaa
      301 ggtgctggtc cagagccttg ctgggggaaa gctgtctgta tttgtaagga ttcactgtag
      361 ggaaatgcag tgttttctgt ggattgggc
//
LOCUS       KCPA01000905             799 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 99228tic ultra-conserved element locus
            uce-5864, sequence.
ACCESSION   KCPA01000905
VERSION     KCPA01000905.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 799)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 799)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..799
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="99228tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>799
                     /note="ultra-conserved element locus uce-5864"
BASE COUNT          235 a          138 c          163 g          263 t
ORIGIN      
        1 taattcctct ccaactggca ttattatttg attgcaatga attacctttt taaaaaaaat
       61 cataagtata aattcacttg actgatcctg caaattattt atgatgtagt gttttggtct
      121 aggataacct tttaaaataa atcagttttt caataatagt tcaatgtttg cccacctaat
      181 ggtgttccca ttaagatctg catttgtcac caacctgcct tttctgcctg tgcaggagac
      241 aagtcaccgc ccctaaaccc actctgcttg tagggtaaag taaatgcatg tctttgtagg
      301 agaataaata aaaagagcaa gctgagtcaa taagcgggtt caattcctgc ctgcagccat
      361 ggcggacagc tcatttggta gatgtgggtg ttttgtttac atttataatg cagctttatt
      421 taatgctgac agatatagct tgtggcaaat gatagtcaga atgtatgagc agtcataatg
      481 cttctgtctt cttatagtgt gctgctgaaa ataagcagtt cacctctgtt tttattgagg
      541 aaaggatatg agacagctat agcttcgcga ggctatttat tgagttgttt tactagctgt
      601 gaacatgccg ctttatagca gttgtgaaaa tggactttgc tagtgtgtgg gaaaggaaat
      661 aacattgcag tatacaaggg tagtaaaaaa accctctata aataattttt cagactgaag
      721 aatattctca tttaaacagc tagagagcct ggtgattttt gccagctgcc agctcttccc
      781 aggatggcat tgggttaaa
//
LOCUS       KCPA01000906             434 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 99334tic ultra-conserved element locus
            uce-3503, sequence.
ACCESSION   KCPA01000906
VERSION     KCPA01000906.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 434)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 434)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="99334tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>434
                     /note="ultra-conserved element locus uce-3503"
BASE COUNT          167 a           58 c           80 g          129 t
ORIGIN      
        1 ctccactaat atagtaatca aataaacctg acaaataact tttttaaagc tgcagaggca
       61 tgctaacaaa tctatttgat caatatatgg gatgtgaaaa aagaggagac aagattgact
      121 gatgaataaa atggaactga cacaaatagg ctgacagcaa gtcgcaagtc tctttagggc
      181 aaatgcaatt aacttagaat aatagactca aatttgatgg ttagaaatgc atttttatta
      241 acaatcacag cctgaatcat tatgcactct tatgaataaa attgtagttg tactgaaagt
      301 ctgtgtatac atgtatgcat gtacatgcct tgttgaagga gaggtttatt tttgtggcag
      361 aatggttgtg tgggatttaa aatataaagc atacacaagt ataaacctaa atattcaaac
      421 tagtgatata aaaa
//
LOCUS       KCPA01000907             585 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 99442tic ultra-conserved element locus
            uce-2195, sequence.
ACCESSION   KCPA01000907
VERSION     KCPA01000907.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 585)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 585)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="99442tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>585
                     /note="ultra-conserved element locus uce-2195"
BASE COUNT          168 a          123 c          133 g          161 t
ORIGIN      
        1 gatccttcca gagcagccag cagaagctga gcacttccct tcttcccctt tcttcacctg
       61 ctaagtgccc acactgcaca cctctctgag ctggggttcc ttctccactg gtcaacccct
      121 ggccagagaa ctgggaacaa agacgccttt tcgagcattg catgtgcaag gatgggagga
      181 ggaggggagg ggatggggga agaggagagg tacagacaca gcactccttg gcagtgattt
      241 atagactggg tcaggcacaa attgactcgt atgcaagaaa tgtaaatgga atcgagactt
      301 ttgatggaga agctcatttt cagacttaaa cgctttagat taaacacact cacacacaaa
      361 tgctggcggg gagggtgttt tatataattt acattacaaa tcaattcatt atccacagag
      421 gcaggttgca ctgattttca aggatcggag atttgatgaa gaggattcat ttcaagaaat
      481 aaacctttta aattaaccgc aagatgaggg aaatttcttt atttaaaaaa tgcgccagcc
      541 ccttctttgt ttcttttatt attattaata ttattttcca tccgg
//
LOCUS       KCPA01000908             633 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 99549tic ultra-conserved element locus
            uce-7282, sequence.
ACCESSION   KCPA01000908
VERSION     KCPA01000908.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 633)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 633)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="99549tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>633
                     /note="ultra-conserved element locus uce-7282"
BASE COUNT          162 a          157 c          182 g          132 t
ORIGIN      
        1 ggagactggc aggatctcga gaaagccacg gggacagctt tggaaagctc ctggagctgg
       61 gtgctatgcc aacctcagcc tacctgcccg ggagctggca gcacatgccc cagcccccgg
      121 atcagcaccg ggcccatccc tgcatcactt tcctgatcaa ggtcattcgg tacagctgca
      181 atacctgagc aaactaccta agcagctggg gtggaagttg gcctgaccac tgaaggtcaa
      241 gtgtgcactt atgcatattc aaagctgcct gcaggatcga tcgggtttta attgtttttc
      301 ctggggtttt ggaaggaagt gccaggggca ttgatcagtc ccagacaagg ctgctcacac
      361 accggggctg gcagggaccg tcactgggaa gtgcaggcaa cgacgatgaa gggatgaagg
      421 cacagccacc gctggccgag aggacgagcc actactgggc tgcactggaa aagaaagttt
      481 ttaattaaaa gtggcaattc tgagccgcct gctggcagca gccacacaat caagagcaag
      541 gagctttgct gtttaatatt taaagacaac gtttaatctt taaacaggaa agttcttctt
      601 ctgactgtta aagcgaggca gaaggcgctg gtg
//
LOCUS       KCPA01000909             770 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 99662tic ultra-conserved element locus
            uce-943, sequence.
ACCESSION   KCPA01000909
VERSION     KCPA01000909.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 770)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 770)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..770
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="99662tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>770
                     /note="ultra-conserved element locus uce-943"
BASE COUNT          221 a          115 c          149 g          285 t
ORIGIN      
        1 taaatcctaa aagcaccact attttagcat aataaaagaa agtccaaaga gctcctatat
       61 agactacgcc agataacttt gcttcgtcgg tatttgtagc ttattgtaac tttttttaag
      121 aaatacagga tcatcatcat catcgtattg tacaaaagcg ctttgattaa cacaacggct
      181 atatagtttt ttaattttag gaaaaacctg tggagacagt gacctagtct ttaagagtcc
      241 tttcagtata acgtctgact aaagacatgg cctttaatat ctgttgggaa ggaaatgtcc
      301 agacttttca accttttatt gtatgtttcc ttttccttgt ttacataggg aacaatgttt
      361 atagttgtgt gtacagtggg ggtctacaac aagaagtgta tattttaaaa caatttttta
      421 atgatttaac aattttttgt aaatcatttt tgggcttctg cagctgtaga ttctcactgt
      481 gaattccctt gcttgcttat tcataagtgt atttgcaata ccaaatatac aggtttagta
      541 cttttgcctg ttagtgattg ttttacatgt gtaacgtttt ggttgagatg ttaaatggtg
      601 gacgagtact gtggatgtga atgtgggaag taattttaat catgtgtaat tggtcacagg
      661 gcctaagttg cagtaattac cttttgctga tttatttaac aatgccttgt tgctttgtat
      721 gcattaacat ttgggtgtaa agattgtgtg tatatccaac agggagccac
//
LOCUS       KCPA01000910             614 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 99771tic ultra-conserved element locus
            uce-1389, sequence.
ACCESSION   KCPA01000910
VERSION     KCPA01000910.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 614)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 614)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..614
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="99771tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>614
                     /note="ultra-conserved element locus uce-1389"
BASE COUNT          231 a           93 c          108 g          182 t
ORIGIN      
        1 cttaattgag gaatttaaaa acaacgactg aaaagagcaa aaatttcaaa gtaaatgaaa
       61 tagggagacc ctttgaaacc caaactttag tgacagcccc tacagagagg ctattttcta
      121 aaacatgtaa gatatgacta tagaaagaaa gataaggagc aagggaatga cacactgctt
      181 ggtattttaa acttttgcat tcctattggt aaaatataaa gtccataaaa tttcagatag
      241 tgtgcaaaat gtttatatat taccaaggtc tccctttaaa aggtttatac ttttacttta
      301 tgacctgtcc ttgatttgac acttccgctc atcagaaagg gatttataaa ataatcctga
      361 aggtgaggaa cagacatctg tcagggactg gctgagtttc actttgcgaa atttaagaag
      421 ggagagaaat cctgttaagc tctctttagt caccaataga catcaaaggt aataattaaa
      481 gaagacagac gtcataaaaa taaatttatg tagtttttta taacgcacaa gcactctagt
      541 gtgtaaaaca tctattaagg tgaaagaaaa tacaacattc caaatgagca aaaatctttt
      601 ttgtttgagt tttt
//
LOCUS       KCPA01000911             659 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 99879tic ultra-conserved element locus
            uce-3713, sequence.
ACCESSION   KCPA01000911
VERSION     KCPA01000911.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 659)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 659)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..659
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="99879tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>659
                     /note="ultra-conserved element locus uce-3713"
BASE COUNT          247 a           87 c           89 g          236 t
ORIGIN      
        1 tgtacagcat gtttacttaa atatttaact tgtgaaattt aataaaataa caatttaaaa
       61 agataaggat taaaaaacta ttagaaacat tcacataatt aaaaattaaa attctcagcc
      121 attatcagat gtaggaaaac cacataagaa tccataaaaa agttttcaag ctccaataag
      181 ttaggtataa tagacctttt ttgtcaaaca caaaaataaa tattattgat tttatgaata
      241 aatacatttt cttaaatgat ttagaaagct ctgtttattc atatacagac agtgtttaga
      301 atatgtagta gccagtatgt ctgcagatat atttatgttg gactgtttag attggcttca
      361 cctctgtaat aatttataac agtttcaatg taaacctgcc attgagcagg tcataaaggt
      421 cctgcatttt aaccatcata atttcagata aacccacaaa actatttctt acaggaaagc
      481 tctagttaat ccttgaatat ctttgggatg gaatttgttt ttatttaggc aaatttaaag
      541 agcaataaag gctgcatttt aacagtgttt gatattgcag tactggtgat aatttaaaat
      601 atatacattt tgttttgttt tacagtagta actcttcatt gacacttttt aatacaaaa
//
LOCUS       KCPA01000912             523 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 99985tic ultra-conserved element locus
            uce-1361, sequence.
ACCESSION   KCPA01000912
VERSION     KCPA01000912.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 523)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 523)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="99985tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>523
                     /note="ultra-conserved element locus uce-1361"
BASE COUNT          184 a          111 c           79 g          149 t
ORIGIN      
        1 cctagagggt atgcaaaatt agagtactat tttgatgact ctggaaagaa ggaaatctcc
       61 ttctccttgc cacaaatgtg ttctgccaaa tgttgattgg aatagaaagg gttaccatac
      121 ctctcaggac attttgataa gatattttaa taccaattta ttaaagtacc agcatactag
      181 tgatattgct gcaattcatt gtacctagaa aactcagcat tttatagagt tctaaggcag
      241 cccaataaag actcgctcca ctctaataaa gcaatactcc gggcaaattt acggttgagt
      301 tctattctaa taaatctcca attgtaaact aatgaaaaga ccccagtata cctccctcat
      361 ccactcacac aaaaggaagc aatttgaaaa tgtttgacaa agtaacactg cacatcatca
      421 gcactgaaga acctcatttc ccgtccatgg agatattgca ttatcattca tattaaagaa
      481 taacccaatg gcacttattt tcaggaaact aaattaccac aca
//
LOCUS       KCPA01000913             507 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 100094tic ultra-conserved element locus
            uce-180, sequence.
ACCESSION   KCPA01000913
VERSION     KCPA01000913.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 507)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 507)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="100094tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>507
                     /note="ultra-conserved element locus uce-180"
BASE COUNT          184 a           92 c           84 g          147 t
ORIGIN      
        1 ctgaattaca gatctttctt tacctgttgt agtatgaaca ctacctagtt tctaaacacc
       61 actacaaagg agatcaggca tgaaatggtc ataagtatta gtttccagta gatttcactt
      121 ttctttttca agctacagct tgacattttc caaaacctct ggagaccaaa cagtgaaatc
      181 gagttactgc aggagtgaac tgtaaattcc atgaaaccat gtaatatatc ttaacacaga
      241 tggacacagt acattaaaat aactgtggat gataatagaa caataccatc tgttttgtct
      301 ggggaagaca acgcacatca gctacactgt cagtcatatc atatatcttt agtgtcatca
      361 tgtggtagac gacaactcta tatgtcaggc caagtgtaca cttctttagg gattactgaa
      421 aacagtaaaa agttaactgt gaaaaagaat tcatgaaaat acttaaaata aacataagtc
      481 tagtacttaa caagcagaca aatgtaa
//
LOCUS       KCPA01000914             592 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 100201tic ultra-conserved element locus
            uce-6502, sequence.
ACCESSION   KCPA01000914
VERSION     KCPA01000914.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 592)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 592)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..592
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="100201tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>592
                     /note="ultra-conserved element locus uce-6502"
BASE COUNT          210 a          109 c           88 g          185 t
ORIGIN      
        1 cagtagcaaa agttaaaaag gtaacatgaa aagaaagatg aaaaaggaat gctgttcaaa
       61 ttgaaggact gcagtttcaa gtttcaatcc tgtatcaaaa tatctccgcc tcatcttctt
      121 tctcagtcat cacaaatgaa acagtacaaa gaagtacaca aacatcagta caatgctgtg
      181 tgtgtactgc tatccaaaaa tcacagttac aaaattatac ctgacatatc aaaaactgac
      241 agtcacatcc tcaagatttc ttctgttcat tcccatggac cttctttatt aataaatctg
      301 acacataaaa agcatctgta tgactaaagt gtcagttact ggaaagaccg ttttgatcta
      361 cttcttaact tttagaagaa atattctctt ttttatgaag acagaatctg ttcactgact
      421 gccagctttc aaatgaccac ctcttgaagt ttaattttaa gttttaaata aatattgtat
      481 gcatgcagaa taattatgat gctctagaga gactgtgtat aatgacattg attctttttt
      541 atctaaaaat gccaaaccct tgaggcagca aagtctgtat ttgccacaga ta
//
LOCUS       KCPA01000915             718 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 100310tic ultra-conserved element locus
            uce-7297, sequence.
ACCESSION   KCPA01000915
VERSION     KCPA01000915.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 718)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 718)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..718
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="100310tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>718
                     /note="ultra-conserved element locus uce-7297"
BASE COUNT          223 a          174 c          132 g          189 t
ORIGIN      
        1 cttatcctgt ataaagctat gtagccttgc acaaagagcc tttggcatcc tgtctctggc
       61 ctacctggac agtagcaaaa catgtttatc agaccataca aaacctgaac tgcaagcagt
      121 tactgaaggt cgctaaactg caaaattcaa acatgcttct atgctttagc cgcacagaca
      181 acgataaaac aaagcctcca caaccacctg taataatatg cctgttcagc cagcaattcc
      241 aaagtactca gcaacacaag gtagacattt tctgcagctg ggtttacatg tacattcctg
      301 ccaaattgtt gtctcgtccc ctcttacctt cacattagtc cggagtgcac agtaacatgc
      361 aaaaaacatt gcagtaaaca aggagcatat ggaccagtat tcagcgtctc tgctctgcac
      421 aaacggtaca cacacgatcc cgagcatgtg ctactaagga gcatccgttc cctctgtcag
      481 tttgaaaatg cattgatctc tgtttttctg actacaaaaa gacatgtctt gaaggcactg
      541 agtgaaagct acatatctct tcagcgacta tatatagaaa tatgcccagt aatttcaatt
      601 agcagagaat tcagcatctg aaacttggac ctcagttgct tttccttcca gcattttaaa
      661 ttcagaactc agccaggggg gaaaggtgag gaattaaaac gtacgcaatg agttactt
//
LOCUS       KCPA01000916             813 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 100422tic ultra-conserved element locus
            uce-6260, sequence.
ACCESSION   KCPA01000916
VERSION     KCPA01000916.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 813)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 813)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..813
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="100422tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>813
                     /note="ultra-conserved element locus uce-6260"
BASE COUNT          247 a          173 c          127 g          266 t
ORIGIN      
        1 gcttcacgca gtggaaatca aatacttcct taacaaactc atataagtca aataactgag
       61 ccttcgttat gaaacactgt agttgcatgt tctcataaac atttatataa ctgggttgtt
      121 cacagatgaa aatcaaatcc atttcagttc agataatcat tctgcattag gaaaatgaat
      181 aaattaaaag tgtgctccag caatttactc ttcccaagca gctatcctgc acgctctgca
      241 gaggatgtca aaacctgctg atatctagca gagtcaactc caagtttgtg tatcccggtc
      301 cattctacct ttccatcagg cagtacatgt ggaaatggaa aaatagctct ctaattaatc
      361 aaagtcagat ctgcctgaac gcctggagtt gctgctgatc cttgtcccag cttctaccat
      421 gttctctctc tatgtttttt accttgaaaa cttctgctct gagctgggaa tgcctgaagg
      481 gcttgcacgg taagtcaatg tgaaattatc tcagcaggaa gaagttgctt ttcagcttaa
      541 atgatttaag gcagcaattt ttcacactct caaactctga caaacgcaca gattgcctct
      601 catgtttgac ttcaaaatat tcaaagaaaa gctattttta ttaaaaacac tctagagaaa
      661 attgtatgtc acttgttctc tgatataact tcatttctcc tgacagtgac aattttcacc
      721 tcagtacaat ttctttattt ttttccaaag ctaattctgc ttaatattag tatttataca
      781 aactcatatc aacttgtctc tgtgaaatgt tca
//
LOCUS       KCPA01000917             792 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 100532tic ultra-conserved element locus
            uce-7764, sequence.
ACCESSION   KCPA01000917
VERSION     KCPA01000917.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 792)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 792)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..792
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="100532tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>792
                     /note="ultra-conserved element locus uce-7764"
BASE COUNT          214 a          179 c          180 g          219 t
ORIGIN      
        1 aatcaaagtg aagagattct agttgtgtat cttctgctaa aaatctctca gtaatctcat
       61 ctctcagaca ggcagacaac tcaccataat caattccgga tgtgtgggat agcctgggaa
      121 tgttagatca tggtgaccac cattccactc tgtgtctctc ttaaaagggc cacctaaaag
      181 gccccagact atggccacac aatcccttct tgcatccttc tattgagagt atcagggcct
      241 atacagtgct ctccagagtg cttccccttt aagacaggac tgtgcagtct ttatttgctt
      301 gttgaaactg ttcagtttta ggacaggggg ggaggtcaca cctgttgtgg aacttgatag
      361 aaggcttatt tataaacttt cagagcttgg gattcttgca gtgctgaatg cgctgatgtc
      421 cggaggggaa ggtcactgaa atgcttgttt ataaaagcag cagcaactgg aaaaaccata
      481 aaagtctgaa atgatgaaat taccaagcta tttgatcagg cgcatgggct atgtgctctg
      541 tggccagcca gaaaaacctc gcacgtaaga gtcaaccctg ctggctgctg ccctgaattc
      601 tccttcagag gcaattgcag tgtgcctgaa gagggcaaaa aataatcagc tgcttagtat
      661 ggtctacttt tgggtcgctg gctggtccac tcttaatttg accttgcatg gaaaggggaa
      721 agcctactct acacttggta tcacagctaa tccactcttt agtttcacaa cttcaaagag
      781 ctacaccact tg
//
LOCUS       KCPA01000918             440 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 100644tic ultra-conserved element locus
            uce-2370, sequence.
ACCESSION   KCPA01000918
VERSION     KCPA01000918.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 440)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 440)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="100644tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>440
                     /note="ultra-conserved element locus uce-2370"
BASE COUNT          111 a           89 c           89 g          151 t
ORIGIN      
        1 tttttttttt cctccccttc cttttgctag ctgtctagga ggagtaaagc aggtggctcc
       61 ccgtggctga cttttcatga caacatgcca ttagaaattg cggtcctgtt gatcaatcca
      121 ctcgacatga cagctttgcc gcaaggcctg gctctttgag caccagcgct ctggcttttc
      181 cctccttttt tcccgcacta attggtgaaa gtttttactg tgcttgtggc ataggaaatt
      241 cttttgaaca ttgtcacaat caagtgttga cttctttaga attgcaagta ggttaagtga
      301 gtatcaacat taatccacaa aaggttttat gaaagtaaaa ttggggattc tgaggaatca
      361 attaaaatat tgttcctttt tttgcacagc caaagatgct gccatatttg catctcaaaa
      421 agtagaattg gttagttgta
//
LOCUS       KCPA01000919             440 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 100753tic ultra-conserved element locus
            uce-8046, sequence.
ACCESSION   KCPA01000919
VERSION     KCPA01000919.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 440)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 440)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="100753tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>440
                     /note="ultra-conserved element locus uce-8046"
BASE COUNT           76 a          137 c          102 g          125 t
ORIGIN      
        1 tgtcatcgca gagtcccgtc cccagaattc ccagctcctc gtgctctcct gaaggtgcct
       61 gctgcagggt ctggtgcgtc ccttcccccc tcgcctggcc ctgccgcacc gacctgcact
      121 tagtgtgttt cactcactgc ctgatctaca tttcagggaa gctgtacacc actaatggta
      181 gcaactcttc atcctcaagt agccaccatc acgccgcagt atgcggtgcc ctttaccctg
      241 aactgcgcag ccggccggcc ggcgctggtc gaacagacgg ctgcagtact ggtaattgcc
      301 tcccttgatt gtgttcacta actgagtttt tgttttaact tagagggcat ggaagcatgt
      361 gccatcttgt ggctgtgttc ttgctacatc ttaatgtctt gttgttttcc tccccaacat
      421 tgctgaagca ctgtctgact
//
LOCUS       KCPA01000920             593 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 100859tic ultra-conserved element locus
            uce-169, sequence.
ACCESSION   KCPA01000920
VERSION     KCPA01000920.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 593)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 593)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..593
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="100859tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>593
                     /note="ultra-conserved element locus uce-169"
BASE COUNT          184 a          103 c          132 g          174 t
ORIGIN      
        1 tgaactgctc cttcatattg gctttttaaa aaggaaaatg caaagaacgt aaaagtaaaa
       61 ggaagtattg aagtactttg tgagttttaa ccattttatg taaaccattc cttatcatca
      121 aagggttatc ttctgacatt gcacggggat agaactatac agtaaataat gaattgtggg
      181 atgcagccag gcttgcagaa aataactatt tgagggatgg tgcatgaaca gaaagctgta
      241 attttgacag gtggcaaggt gtcgtgtcac caagcccttc taaagcctca tatctcatac
      301 ctattgatta atggctctaa ttaaggaatg aaatcaagca tgtgaagaca ggggatcgct
      361 ttaggtcctt gtttggtagt tttctcttcc tggcgcacaa ctcatccatc taaatatcac
      421 tgctctttca tttattacag ttggatgata ccaaaagaga actggaggag gtgcatgctg
      481 atcttgtcat ggtcatgcag gaacttgatt tggcaagaac tgaggtaagg caatgtgtat
      541 taccaccagc tgaatgaatg ctacaaaacc atttgaaccc ttggtcaggg tga
//
LOCUS       KCPA01000921             563 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 100972tic ultra-conserved element locus
            uce-7538, sequence.
ACCESSION   KCPA01000921
VERSION     KCPA01000921.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 563)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 563)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="100972tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>563
                     /note="ultra-conserved element locus uce-7538"
BASE COUNT          149 a           93 c          130 g          191 t
ORIGIN      
        1 agagagctcg tgaaagattt gctacactgg tctttggggc aatatagctc tttcaaattt
       61 atttatttag ccagaggatg aaagtgaaaa gtgaatgaag aaaaatcagg ctttctgctg
      121 aattagcact tgtgtgtctt gtgtttagcc ttgatttaat tcgtatttag gatttctcct
      181 cccagcacat taatataatg tcaatgtaga gtgcattgca tgttgtaatt actggagaga
      241 gcagtagttg ggaaaacaga cggtaattga acacatggct gtttattaca acaggacagt
      301 gctcctgcgc tggtatttag ggcattaata gggaggaatt gatttgttgt tttaagatga
      361 attcaatcac tgttgcttag acctttgttt gctcaggccg agttatgctt tgtttgtgtt
      421 atgtgcccaa gaggtttaca caccacagtg tggcattagt catgcagagg gcttgggagc
      481 agagagccat ttaaatgagt aaaggacatt cttgtctctg tttatcttcc tctccagttt
      541 tgttaccctc taatctatct cca
//
LOCUS       KCPA01000922             640 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 101078tic ultra-conserved element locus
            uce-5978, sequence.
ACCESSION   KCPA01000922
VERSION     KCPA01000922.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 640)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 640)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..640
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="101078tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>640
                     /note="ultra-conserved element locus uce-5978"
BASE COUNT          192 a          119 c          106 g          223 t
ORIGIN      
        1 tttttcccag agtgtatcac tggctattgt ccttatcaaa caaagccctt tcatcagagg
       61 ttctttaaca cactttattt ctcttttatt ttgctttgaa ataagccggg caacaattaa
      121 tttcagagag agagagagag aaagagaatt caacaaggat ctattactac tctcggcttc
      181 tattgctgta atgaaaatct atttcctttc ccttttgtgt cccatataat ttaatgccca
      241 ttttattaat ggtctgaaat aattacggaa ccttttgtga ttctcaagta tgtttcattt
      301 aattgtgcaa taaacgccta atctcttcct ccatctgaag ctattatggc attaaaatta
      361 acaattatgc agcaatgcgc ccgggtccat agaaatcact ccagataact agacatatat
      421 aaatcattca tgagaacaat ttctgaaaag agacgaaggg agagaattgt gttgagaatg
      481 acattgggaa gccaagggcc tggtctctaa gaagatagca acaccttttt cctcttcttt
      541 tttttccttt tttgttatta ttattttact aattgtgttc agtggcacag ccattagcct
      601 gacagatatt ttcagaatta attaactgtt agctcagagg
//
LOCUS       KCPA01000923             493 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 101185tic ultra-conserved element locus
            uce-5510, sequence.
ACCESSION   KCPA01000923
VERSION     KCPA01000923.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 493)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 493)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="101185tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>493
                     /note="ultra-conserved element locus uce-5510"
BASE COUNT          147 a           83 c          105 g          158 t
ORIGIN      
        1 acatgtcttt taaattatag tgcccatttc ctgctgaaat aatttctaca tagagaggct
       61 cctattacag caagaggagc atggacgtca tgatttatta ttatttatgg ccccagcgtc
      121 ttgtttatgc acgatgggtt aggtgctcag gatagaaatg ccattatgca aatgacattg
      181 aatgtcctta ctgagcctaa ataatttttg tgttggacga ttaaacctca tctgttattg
      241 atatgggctg cagtcaggct attaaagagt cccaacagta cttactccca gtaatgggaa
      301 aattgagagg aagaggctaa acaattgcct caagtgcgcc atgattgtct ggtaggagtg
      361 gaacataacg agccctctga atggaaatcg tgtttactac ttagggataa ataaaaacac
      421 gcaataaatt gtgttttgtg atctgaattg gtgcaccaga gaatttgtgt actttcaatt
      481 tacttattta ttt
//
LOCUS       KCPA01000924             537 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 101296tic ultra-conserved element locus
            uce-7943, sequence.
ACCESSION   KCPA01000924
VERSION     KCPA01000924.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 537)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 537)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="101296tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>537
                     /note="ultra-conserved element locus uce-7943"
BASE COUNT          189 a           83 c          106 g          159 t
ORIGIN      
        1 tttattacca gtcattatgg ttagggtgga caaagtagca tttgcaactg cattagtaaa
       61 ctcatgattt tgcaaggctg tagtaaacat ttctgtgaag taatacgaga atagaatcat
      121 agaatggttt tatgagagaa tacatagagt acactactgt gttaaagctg cttaaaaata
      181 gctgtattat ttactggtct aggaaaacat aatggactat gggtaagaca ttttcccatt
      241 cttaattaaa cttgcaacag gaaaaactac cgaagatatg tttcagcctc aatcctatat
      301 aaaacagtca aaacagggat gtgggaaaat gatggagcaa agcacaggta agtgtcaaga
      361 agggcatggg tcttcaccat atgtagcttc aggaagtagg ccagtgaatc cagttgcatt
      421 tttatctttt tggattacat agttcacgat actacactac tgcacaaata aatttaaata
      481 atgttgtcgt aagaatatgc tgcacaaagt acctgatgca caaattctaa gatattc
//
LOCUS       KCPA01000925             623 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 101406tic ultra-conserved element locus
            uce-2451, sequence.
ACCESSION   KCPA01000925
VERSION     KCPA01000925.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 623)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 623)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..623
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="101406tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>623
                     /note="ultra-conserved element locus uce-2451"
BASE COUNT          154 a          129 c          130 g          210 t
ORIGIN      
        1 gatcctttta ttgcagtgga tctgtagcaa tttgcactgg ctgggaattt ggaccctaaa
       61 agcttgtgtc aacaaaagaa aaagccatag aactaagtga agctgttgct gtcagagact
      121 tttctattat gtaaccctaa agtggtcatc cgaaacagaa ttagggggga ggtgtgaatg
      181 tttcaaggag gtctttgaaa gtttcttcaa atgttcattg catctaagat cccagtgtgc
      241 ctttatttgc tccagaatac cgctggactg ccaacaaagg agggcttgtc ctcccaggaa
      301 ttttctgcat tcctctctgg agtaggcatt tttctcagct acaaaggccc tttggcaaat
      361 tccctctaat cattggattt accctgggct ctgataggtg ccattcatga acttgttctg
      421 ctgtttgatg gggctgaagc attaatggga tcttttcatg ataaacaaaa cagagtaaca
      481 ttactggagg aatcacaaag ctgctcttgt agggcaatgt ggttctttct tgttccactc
      541 tgttctccct tttcctttca tttttttcct tatcattgcc ttactttatg aacatgcatt
      601 ctttttagtg tcagatcttc cca
//
LOCUS       KCPA01000926             616 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 101517tic ultra-conserved element locus
            uce-2886, sequence.
ACCESSION   KCPA01000926
VERSION     KCPA01000926.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 616)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 616)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="101517tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>616
                     /note="ultra-conserved element locus uce-2886"
BASE COUNT          182 a          119 c           94 g          221 t
ORIGIN      
        1 ttcctttagt tatttccggt tgaccagcac ctttcatacc catccttctt tcttttaatt
       61 aaatgtattt attaagtctt tactccaggt aattctttaa acttatagca tgaggggaaa
      121 gagagaatat ttcacagtga tattttattg cacttgttcc ttaaaatgtt caagcctgtt
      181 atattgctct acccccaggt gtagaacatg aactcctgag gttgaataga atgattcact
      241 tgtttcacta tgaattcaaa gtggatatga agcataaatc ccctttttcc ctctgtaata
      301 tagtagccat gaatcacaat gttacgctga gtcgatcata atcttaacac ttcacgcctc
      361 agacaacaac ttgatttgtc aagagaacag gcctgcaatc tgccaatagc attgattccc
      421 attggaaaag aaaggataat taagtcctca gtgagctaat ttcttttctt tatttacttc
      481 taagaaatga agaaatatgt gtatagagtc agttttgctt tctttaaata actttttgtt
      541 ccatttccat ccgataaatt cttgggatca ttttatttca ccatacaata gcacattgtg
      601 ctacatctca gttagg
//
LOCUS       KCPA01000927             612 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 101736tic ultra-conserved element locus
            uce-3444, sequence.
ACCESSION   KCPA01000927
VERSION     KCPA01000927.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 612)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 612)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="101736tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>612
                     /note="ultra-conserved element locus uce-3444"
BASE COUNT          198 a           91 c          110 g          213 t
ORIGIN      
        1 ttttatgaca caaaagtgtg tcataaaaat taacatttag ttataacaag gagatgtttt
       61 tatttcactt aacatctgta gcagatgtga aatatgtaat tatttttgta aaagacttca
      121 taactttcac gattcttttg tttggcagat ctttcttcta ttgggcattt tagacaattg
      181 ataagtatta ttcagtggca tatggtctga gtctgacgtg ctttgaaaag agtagagact
      241 actaataatg aggattctgt gaaaatggga aaaccagcac aacagatatg ctttgagaaa
      301 gtatggggtt ttagcatctt gaaacaatat atcacactca aagggacaga attgggctgc
      361 acaatctgtt agctcattct tgtccaatct ggtctcctcc tttcttttgg agccagcatt
      421 gtcatcaact tgctgaatta tactctgact ggaatgtatt tcaggcacag ggtaatgtat
      481 ctgcttaaat ggaatcctat ctttctacaa aagcttttta agtataataa atttaaaata
      541 tattctatta gcttaaagta aatggttcaa cagtttacat atgtgcagga acaaagaaaa
      601 tgactgctta tt
//
LOCUS       KCPA01000928             576 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 101843tic ultra-conserved element locus
            uce-357, sequence.
ACCESSION   KCPA01000928
VERSION     KCPA01000928.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 576)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 576)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="101843tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>576
                     /note="ultra-conserved element locus uce-357"
BASE COUNT          206 a          104 c           97 g          169 t
ORIGIN      
        1 agcatcactt taaattaaaa ccttcacatt ttcaaaggaa aataaatagt taatggtttc
       61 agaattatta ttcttttcta cacaataaaa atttcccaat gataaaccaa tggcgagaca
      121 cttacatatg caaatacatt tccgtgaaag agttaaagtg ctttataata taaatttgct
      181 ttcagtgcca atataattag attgtaacaa gcaaacccct gcaacataac acagtgaaaa
      241 tttgaaaatt tgattctccc tggcaaacaa ccaagtccct gcgtgtgcac aaacctgaca
      301 ttaataagct acaagagatt acatgattta gaaaagaagc acttggtgtt acaaaatcaa
      361 ataatagatc tctaggctat aattaggaga attgggattc aacaatgaag tcataataat
      421 gtaatttagc tgtaagtaac agagccatgg agtcacatta ggaggtgtga tcacatcttt
      481 cagcaaagct ctgctgtgta gacttattgc tgttcagttt agtctagtac gcagcaacct
      541 gttggcacag agctcaggct gacagcctct tgttct
//
LOCUS       KCPA01000929             770 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 101956tic ultra-conserved element locus
            uce-2344, sequence.
ACCESSION   KCPA01000929
VERSION     KCPA01000929.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 770)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 770)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..770
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="101956tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>770
                     /note="ultra-conserved element locus uce-2344"
BASE COUNT          190 a          175 c          212 g          193 t
ORIGIN      
        1 gcctgtctgc tgaagacccc ccactgccaa ggcaaaggtg caatgctcct acctcatctt
       61 gagatgcagc gttgagagag cagctggtcc ctaattgccc aggggtgact ctgacatcgg
      121 actctcagca gaagtgctgc tcacagacag ctgtaaaaag caccttcccc acaaaaagtc
      181 ttcttgtgag ggtctggtgc cattttgaaa ctgaagttcc ccggggttaa aagccagcat
      241 cttaattcag agtgccaatg ttcaattttg ctttctgcta ccagactaga ttgcaggcca
      301 gcgagagagt ctgggttagt ggcccactgg gtcacctccc atttgttttc ctcaattttg
      361 tgttgtcata aattcattcc agcccgttgt ggttgatcag tttatctccg ccggggcagg
      421 gagcgctgcg agcatgatat atggcacaga gcattgtagc cagcctctcc atgaatcact
      481 ccagctgttt ggtgtcagcc ccaaagcaaa cagggcccgg acgctgagca ttgactacga
      541 tgagctcagt atgggaagag acatgacgta tgaatgttta tttaataatt ctctaatatt
      601 tccagcggag tgtggctgtg ccttctggga ggggtgaaac ggggggaggt tgaagaggga
      661 aactctaatc tgttggggtg ggtcataaat caggcagaca acatcattaa tcagggatgg
      721 gacagaagtg gaaggaggtg ggactgaaac tgccatcctt gttggaaagg
//
LOCUS       KCPA01000930             425 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 102061tic ultra-conserved element locus
            uce-4918, sequence.
ACCESSION   KCPA01000930
VERSION     KCPA01000930.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 425)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 425)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="102061tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>425
                     /note="ultra-conserved element locus uce-4918"
BASE COUNT          134 a           88 c           97 g          106 t
ORIGIN      
        1 ccaaaccaaa cccatttccc tttttttttg accacaaaag tgaccagacc cagagaataa
       61 aagctgaaat aaccaaaagg agaaaagaga atttagagag gggagaacga acaacccaaa
      121 ataaaagaaa taaaaactaa ccagctgaat tgggagttga gggtgagtta gcctggcttc
      181 catgggctga cacattggta gccgtgacag ccgttttggc agcataaata ttggcttcct
      241 cttgaaattt acctatgttc ttcttgtacc ggattctctt atttccaaac cagtttgata
      301 cctagggcga gttcaagaga agacaagttt cagctctgcc aagtgaaggt ggattagttc
      361 aggtcccagt tttcttagca ccttccaccc caagcccagg aaaggggatg ggatttgtgt
      421 ggatg
//
LOCUS       KCPA01000931            1406 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 102161tic ultra-conserved element locus
            uce-103, sequence.
ACCESSION   KCPA01000931
VERSION     KCPA01000931.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 1406)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1406)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1406
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="102161tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>1406
                     /note="ultra-conserved element locus uce-103"
BASE COUNT          453 a          272 c          274 g          407 t
ORIGIN      
        1 tataaaaaat aatacaaaaa gctatgtgac tgcctgcaac atggcctcac caaaacacac
       61 cccagtgaga cgcagtgccc atttatcctc atgcagatgg aaataagaat attcgtaaag
      121 gaaaatcatt tctgcatgta tctagctgta aagtcctgac ttgtttttta acccaatgac
      181 atcaccacac acaagttggg ccccacagca cagatgtgct ttcatgcgca gtgatatcac
      241 tttcactaaa acactaaagg catgactttc aagcagtttt aaaattcaga tcagttctgc
      301 tcatatttaa tccagacatg ttggtttaac accaagccaa gccagacctt ttaatgttca
      361 gtggccatga tataaaattc ttcactgtat tgcaccaata aattcagaag tgcagtgtaa
      421 tttgctatag tcacagacac tcttgtgaaa tttaagcaag agtggaaagc aacccctcat
      481 tttgtgcctt atttcagctg ctgtgtagac attactgctg cttgttttgg tcttattgag
      541 atttaaaggt aggctgtaga ccaccatcgg actcaagtta ggaacaaatg tggcattatt
      601 taggagttat ttaaaacaaa caatggaaag aaagtgccac ttgacactga cagcaagtac
      661 ctctgttcat tttgcattgt caatagttcc agtggtagca ctattctttc gacagctaaa
      721 agcagatgtg tgggttaagt atgggagcaa ttcaaatgtc catagtaaac tgcagggggg
      781 cagagagagc tcagagagca gcagctttaa agtaattgac taatacagta aggatattaa
      841 agtcatttag tgccaaaagg gaacacactg atccttgacc ctgagccact ttggagtaat
      901 ctagtattca atccagcgtg taatgactgc caggcctgtc aatcctccgg gctctccagt
      961 caaatgcctg tggctactat tggcttatgg taaaaggaca aaaatgcaag gaaatgcctc
     1021 tcaatcaggc tatgatgtga taatgttatt gctccaatgt attctatatt gtccctgcat
     1081 agtttaatct gttgagatcc atgtcaaaaa ttgcccttgt tccccagagg tctttactca
     1141 accttttagt aacacaagtg gatttgaaag gagaggggta actcacttga tgaatggttt
     1201 ccagttaata taaaaaataa gaggtcaact gtggcttaaa ggctaaccat ggaacgtata
     1261 aattagaata agcatgctag taatctgatt agtaagcctt gctcttcatt taccccagtg
     1321 ggtaaaatat tttccaataa ataatattga cacagaaatt tatttacaag aatgacataa
     1381 ttcctacaaa gtttagatgt tgagag
//
LOCUS       KCPA01000932             944 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 102273tic ultra-conserved element locus
            uce-882, sequence.
ACCESSION   KCPA01000932
VERSION     KCPA01000932.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 944)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 944)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..944
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="102273tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>944
                     /note="ultra-conserved element locus uce-882"
BASE COUNT          310 a          187 c          175 g          272 t
ORIGIN      
        1 gtagtaagaa ttgtctttct gcttttctca tgccttatct ttcaactggt atctggaact
       61 tcttgacact cttctttaac tgtttttctg ccaataggac agaagactga taggcttggg
      121 tttagcaaat aaatcaataa aaatagtcaa gccatctgca aggaagatga aatctaggaa
      181 gagaggcaaa ggcatgagta aaactctgca atgcaatttt aattagcatg ccaaatgtag
      241 gtgtacgaac taggagactg ggaaatattt tactgtaaac atacttccag gctaactagc
      301 aatgctaatg tcaaggtaac aaagaaatcc tgcctgcaca ctaatttctc actgcagctg
      361 ttgaggtgtt agattagaag tctgtatacc tttcccaaga atattaaagc agactgtcta
      421 actgcctgtg tttgtcctag tagcctcatt cttgctgcta gcagagcatg tcccaactgt
      481 tgtcaattta tcaatgtaac gtgcactagt gggcacagtt tgagcagcca ttaggacagg
      541 tgcctctatc catcacagcc agtcacttat tccaccttgt caggaaaact aaatggagct
      601 tttggagaaa tgtaaacaac tctctaatgg acaatcaaag ccccactttc tgaagcaaac
      661 aggaggaagg aatcttttat tagtatttta agtgttaata tgttgcattt taaaaatggg
      721 aaaaaaaaac aaagtcaggt acatacactg agaaaattgt gattatgggc cattagcatg
      781 ctgaaaaaag cacctctttg tctgtcttaa tttcgccaac ctgaaaacaa cagcaaaata
      841 gggcacccca aaataaatca gctcaatata tctaggggct tctctcacaa gcttttcatc
      901 ttgataaaaa tacctcacac aattaggcag tttcatttac caaa
//
LOCUS       KCPA01000933             641 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 102382tic ultra-conserved element locus
            uce-5564, sequence.
ACCESSION   KCPA01000933
VERSION     KCPA01000933.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 641)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 641)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..641
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="102382tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>641
                     /note="ultra-conserved element locus uce-5564"
BASE COUNT          166 a          155 c          145 g          175 t
ORIGIN      
        1 tgcaaatcca gtctttatag tcctttccag atactaaata aaactgtgct tggaagtaat
       61 ttgaatgcca gcaagctggg ccagtttgcc acagatttcc caacaacgtg atgtttatta
      121 ggatacaaat aaagtgtctt cttcacagtg caacgtgcaa tttccttctc agtaaaatat
      181 aaatgtgcct tatgtgcaaa caattttagc atttctgcca tcttactgac aagaaactcc
      241 cagctgttat aatttgtctc atccttctct ctcttgtaga accagccttt gttccttttt
      301 gcagtgccag ggacttgctg agctccacct gatgtgattt gtccaggcat taataatgca
      361 tcttcaagat gcaagacgcg tgaattcctt tagtaacaga tccaccggca gactgccgca
      421 ccgtattgtg ccgttttccc gagatggggg aggcaagagg gtcacgcagg cataggtcat
      481 ccggcttggg agcgggtcct gttatcacta catcctcaag acgaggtcag gctgaggata
      541 atgaacatta caggcgacgt tcctccagca ggcaagtcct tggacgacct gaggtgtcag
      601 gagagctggc aagcaggcga gtgctgtccc taaacaccac c
//
LOCUS       KCPA01000934             446 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 102491tic ultra-conserved element locus
            uce-2057, sequence.
ACCESSION   KCPA01000934
VERSION     KCPA01000934.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 446)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 446)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="102491tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>446
                     /note="ultra-conserved element locus uce-2057"
BASE COUNT          183 a           65 c           71 g          127 t
ORIGIN      
        1 atatacaaaa tttcaaagat aaatacaata tttatagttg atatgttaca aaataaattc
       61 ccttagtgac tgcaagtgtt tatgtgaaag aaagtgttgc aatggataag actattttat
      121 cccttatagc cgtcataagg aataaaatct gctttaagtg gatctgaaaa aaattcaaga
      181 caagtgtata aatatttagc tacaactttg gcaaaatcac aaaagtctac aattttataa
      241 ccacatacaa aacacattag ggaagaagga tctagaagtc aaaaggacaa ttttctggta
      301 caagaaacat agacttcaca gtagcctaaa atgcaatagt atacagtgct agcaaaagtt
      361 gaaaaaatgt tgcagatcac acttaacagg aagctctagc agtggaagta tattaaacca
      421 acagacagta gcaatttctt tttttt
//
LOCUS       KCPA01000935             399 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 102593tic ultra-conserved element locus
            uce-3533, sequence.
ACCESSION   KCPA01000935
VERSION     KCPA01000935.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 399)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 399)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="102593tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>399
                     /note="ultra-conserved element locus uce-3533"
BASE COUNT          125 a           69 c           83 g          122 t
ORIGIN      
        1 ttttaaagat gcttgacagt gtttcatcag ttcaaaaact cgtcagatgt ttattatctt
       61 ctcagagaag atgcttatct atattttatg gtcagcagtt cacagagaag taaataggct
      121 gggtgtagaa gaaaataaaa aaggtgtttc tacttactgt taggtgatac tgcctccata
      181 tttctgggca agcctggaaa ataaaaatat tgatcagcta ggagcatgaa acaaggtgct
      241 ttacagcctg ttggttttgg cataacacag tatccactgg tgtcggtcac aggaaaataa
      301 gaagcttaac tgaaagggtc tgcatttcag cttcaaaaac ccggctagac agtttaattg
      361 aattttacac tggtttaaca cactccttgc cattgtcag
//
LOCUS       KCPA01000936             394 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 102701tic ultra-conserved element locus
            uce-4757, sequence.
ACCESSION   KCPA01000936
VERSION     KCPA01000936.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 394)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 394)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..394
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="102701tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>394
                     /note="ultra-conserved element locus uce-4757"
BASE COUNT          117 a           60 c           89 g          128 t
ORIGIN      
        1 gtggtggata gtgtcctcag ggtaacttgt gcactaaagc tgttttcttt cccactctgt
       61 agaggtatct cattaagtga gatccacact agtgtcatta ttaagttttc atgtgtttct
      121 cagttttgat gctaatcttc atgtgtgtga acagcaccaa tgtggttatg aattattcag
      181 aaatagagtc taaggttcga gaagcaacca atgatgatcc gtggggacct tcagggcagc
      241 tcatgggaga gattgccaag taagtgataa tttgactcag tgatgaagaa aagaaaggta
      301 cattttatat aagaatgtga aatttgatgc taaatcaact ctgtggtatt cagactgata
      361 atgcaaaagt tgctgttttt taatgcataa tcac
//
LOCUS       KCPA01000937             605 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 102813tic ultra-conserved element locus
            uce-3025, sequence.
ACCESSION   KCPA01000937
VERSION     KCPA01000937.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 605)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 605)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..605
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="102813tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>605
                     /note="ultra-conserved element locus uce-3025"
BASE COUNT          191 a          134 c          143 g          137 t
ORIGIN      
        1 aaaatttaag tgctaaatca agcaggttaa aacaaagaga ttctgctgtg aggctggtct
       61 aacattaaaa cactaaagtt cctaagaaat tactacacta cccaataata cttgtgaata
      121 aaggaagaga ctttggccca ctgcacaggt ttgggcacaa aagtgcttgc taagctatct
      181 atttcacaca tgcaacgaca gaaggttcga tattcattcg atcgatgact gaaaaggcac
      241 aatggcaaaa tcggacggac ttcttttcaa atacagatct ccgatgtccc cctacagtct
      301 gcagtcgcac ggctggtggt gtggcacaga cggagcaagg gttacatcaa ggctgttctc
      361 tggaccgtgc aaacagtcta gaccaatgac ctgcaacatc gtgccctttg aagaagaggc
      421 aagttcagtc acgacgaaga aaaatcaagg cgtacccctt ttaacaatag ggagcagctc
      481 gtggctgcaa agaggtaagc aggggtaagc aaaaaaggca tctgcttcca tggttacagg
      541 ccaagcatgg gaaccttgct tttgaagagg gacagttctc aggctccctc acaggctatg
      601 tcatg
//
LOCUS       KCPA01000938             724 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 102923tic ultra-conserved element locus
            uce-625, sequence.
ACCESSION   KCPA01000938
VERSION     KCPA01000938.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 724)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 724)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..724
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="102923tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>724
                     /note="ultra-conserved element locus uce-625"
BASE COUNT          210 a          137 c          145 g          232 t
ORIGIN      
        1 acctaaatca agcataaaca atagagcagc ttgaaaggtt tggtctacga aaaatgtcac
       61 agtctaggaa gactgcttcc tctgtttgat ctgtcactgt atttctcaaa acatgacact
      121 ccttgaacat aatatacttt gatgataaac tagattaact ttcccagtac aaatgaaagg
      181 ccacctgttg ccagaatgcc catattcctt gttggctgtc ttgtagctgt catcacttca
      241 atgcaatctg cgcccaacat gctggaatat aatgaatatg tcaggagttg gaggtcagcc
      301 atcaaagtac atgaaaactt ggcttgcata cagtgtcagc atggaggcct cgcctatcat
      361 cttgtgcaaa ggatttctgc accacttgat ttgtttgcag agggcttgtt tctgttggat
      421 ggaacacatt tactgagagg ctttttgaca gcccattcaa acattttcaa tttggaaaat
      481 ggtgcttcct gtttcaagct ctgtaagtga tggatggtgt gaaatgccac tgtagctgat
      541 catgctattg ttattatttt agcatgaaaa gagccatgat gagctttgaa gtattttgat
      601 gagagaaaat aatataatag gaatacaata tatctatcaa atcctgtccc ttatgtatag
      661 tgagcaaaac ttgcttaatt catccttgct ggacattata ggtctcttcc gtggctttgt
      721 aatt
//
LOCUS       KCPA01000939             385 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 103024tic ultra-conserved element locus
            uce-7929, sequence.
ACCESSION   KCPA01000939
VERSION     KCPA01000939.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 385)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 385)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="103024tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>385
                     /note="ultra-conserved element locus uce-7929"
BASE COUNT          134 a           74 c           66 g          111 t
ORIGIN      
        1 caagcataaa accactgcag caatggggaa aaaaaatcag cttgaaaata attaaacagc
       61 aaggcagcca cccataatga tattcagcag aacacattag ggacagtttg ctgggaatgc
      121 acaagagcac tccagttgtt taattaacat tgaaacggcg gttccacaag aactaaaaat
      181 cctgttaatt tatgtgtctc ttaatgatgc tcatttaaat actgtcaact tttctccagt
      241 ttaatattca tgatttttag tcattaaaac accactctca gcttgtggat tcaccgagaa
      301 acacaaattg tttgatggtg atgtcagttc ttaaaaaagt ccttaaagtg taaatctctc
      361 aatgctcatc acgagggtca ttgta
//
LOCUS       KCPA01000940             688 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 103137tic ultra-conserved element locus
            uce-6714, sequence.
ACCESSION   KCPA01000940
VERSION     KCPA01000940.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 688)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 688)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..688
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="103137tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>688
                     /note="ultra-conserved element locus uce-6714"
BASE COUNT          223 a          113 c          123 g          229 t
ORIGIN      
        1 aatcagcact gcccttctta aggtcaggga aatgtatcaa aacattcata tatttaaata
       61 tgtattgtca ttttaatagg cactgtggat agtttaattt gtatctgtat taaattaaac
      121 atatggtgaa cagggtataa tagattttct ataatttagc tgccaatgtg gcaacagaag
      181 ccagttactc tcaccagcag acatgtcagt ggtttgttta ctagcttatt tgaattaaaa
      241 taaagcttcg cttctgctga ctgcacatca ttatctatga gaccataatc ctgctagcaa
      301 atcctatatc ttccagaact ggctcttttg tttgggatta ctgagagctt agcctataac
      361 aaagaggaat aaggcatccc tctcatcctc gtaattaagt gtggggagta atttagaaac
      421 aaacccagaa agatgtacaa tttggagttc tgcttctata caggattggg gaacagaaga
      481 caaacactga ttatgttagc acaatattta aactattcag gaattcagct tttaaaaaga
      541 aatggcaact accaataaag tattaagttg ttttattcta gagacatttt ttatgtatct
      601 gaaggtatgc tggtaaattt aggcggagct tgaagacggt tttacactac atgcatacat
      661 tatatcactt ttataagctc ttcatttt
//
LOCUS       KCPA01000941             352 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 103245tic ultra-conserved element locus
            uce-4930, sequence.
ACCESSION   KCPA01000941
VERSION     KCPA01000941.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 352)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 352)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="103245tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>352
                     /note="ultra-conserved element locus uce-4930"
BASE COUNT           97 a           62 c           91 g          102 t
ORIGIN      
        1 gggtgcggga gcgggcggct gccagggaag atgaatggtt ttaatcacac cgcttacagg
       61 gcaccatctg aagtttcgtg taagttatga tagcgacagt ttgcacgaaa attgtatttc
      121 caggcttcat tgactggctt aatgagaatc tttacgtgtc agatattaaa ttaagaaatt
      181 aaagagctgt ttcggtgtgt atagactcca ctgagctgct tcttccagat caatcaggaa
      241 cgcgcctcta gaaaagatgg gagaagcctt tgattttctg tcaccaggga agtgaatcta
      301 atatgcgttg gcacctaatt catgttttat taaaaggcat gaggtggatg ct
//
LOCUS       KCPA01000942             512 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 103347tic ultra-conserved element locus
            uce-7909, sequence.
ACCESSION   KCPA01000942
VERSION     KCPA01000942.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 512)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 512)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="103347tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>512
                     /note="ultra-conserved element locus uce-7909"
BASE COUNT          153 a           78 c          124 g          157 t
ORIGIN      
        1 aaaagagaga caggcggccc ctgtcacaca cagtctcatg acagagaaag agataaagag
       61 gagagtaaaa gagacagaga gaggagagat agaggacgcc ctattcctat taatgaccgc
      121 cattcagtta tagtccaatg aagttaactt tttttaatgt tatacctaca aattatactc
      181 tcacatagcc tgtatataag tgacaagcaa aaaaggaaag taacaaaagt tttttttttc
      241 tttctcttct ttaggtttat gaggtctgca ttgttaccaa gaagtgatat ggtttgcagc
      301 tgtatgagct ttacttttgg tatcctggtt cttttgtgcc catttggttt gactagacca
      361 gtttttgtta gctactggtg caatatacat gctgtcagag gtagagtgaa actttttgcc
      421 actgaggaga ctgtagcaaa acaggaggag aggaggaaga ggaggaggag atagagctca
      481 gagttggggg gttgtttctt tttttttttt ct
//
LOCUS       KCPA01000943             448 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 103446tic ultra-conserved element locus
            uce-2127, sequence.
ACCESSION   KCPA01000943
VERSION     KCPA01000943.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 448)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 448)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="103446tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>448
                     /note="ultra-conserved element locus uce-2127"
BASE COUNT          140 a           83 c           97 g          128 t
ORIGIN      
        1 agaataaata aactaattct gcactgatac aaaatcaaaa gcaatttaat taaagactct
       61 taagttttaa agggttttaa atgctatacg ttttggggaa atatcagaaa atgtagcttg
      121 actgacgtca gttcccatct ctgggatggg aggccatttg ctattctgtt taaggcaggc
      181 tggattgtct tattttggag ccagcttggt ggggggtttt ctttgctgct gcttcagagc
      241 tctgagcttc aaaggctgaa attaatggtg aacaaaattg tgcggctctg accatcccat
      301 gcggggcaaa cccatcgagg gttatcatta agtaaagaaa taaagaaaaa aaaaccctgc
      361 cagttccaag aaaacctcat cagataatga cctctgtgat tgggttttca ttaccaaaca
      421 gcatccagag attgtctgcc ccatagaa
//
LOCUS       KCPA01000944             385 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 103555tic ultra-conserved element locus
            uce-6606, sequence.
ACCESSION   KCPA01000944
VERSION     KCPA01000944.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 385)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 385)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="103555tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>385
                     /note="ultra-conserved element locus uce-6606"
BASE COUNT           83 a          138 c           87 g           77 t
ORIGIN      
        1 ctgtgccttt gcaagcacac gaacgggtca gcccctctcc acccactcgc cagggacccc
       61 agccccgcac tcacctatct ggatattgtt ggggaaattg gcccctaaca ccgcccctag
      121 gaaactggtg cagaagaagg caaaaatgtg ctgcatattc ccttttgcat tggcgaaaaa
      181 gaagcccagt tccaagcata gatttgattt ttcccccgct ctgctctctt tagctgcctc
      241 gcctcccctc cgctgcgcct tcgggatgct ctcccccgct ccgaatccag cgctgagact
      301 gccgctgagc agcgcctggc agcaggatta actgagcccc gagagaaaga aagagagccc
      361 gctcctcatc tcccccgcca cacac
//
LOCUS       KCPA01000945             509 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 103663tic ultra-conserved element locus
            uce-2734, sequence.
ACCESSION   KCPA01000945
VERSION     KCPA01000945.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 509)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 509)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="103663tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>509
                     /note="ultra-conserved element locus uce-2734"
BASE COUNT          110 a          140 c           96 g          163 t
ORIGIN      
        1 cttatttcta taacttgatc atattagcag ggatattctt ccattcattc tcataaggga
       61 agaaaaggcc ttggcctcat ccccagcaag ccccccataa ggctctgtag cctctgcctt
      121 ccttctctcc ttccagggct ataaattaat atctcatcat tgaccataat atgccctgta
      181 actctgttta ttattactgc gtattttaga caggtgctaa gtattggcac tttttattat
      241 gctgataaac aatgttggaa tgccaggtga aatgtgttgt cggggtgatt tctcacttcc
      301 ctgtagcctc ccatggattt ctgcctgggc taagggaagg cagagctccc cgccttttgt
      361 agcaccctcc cttctcctgt ggggagccaa cagctgccac tcctttccac tgcacgcttt
      421 caagggatac aatgccacaa atacaagtgc cttcccttgc ttctgatccc gtttccctcg
      481 tgattgttgc tgctctctca gatccattc
//
LOCUS       KCPA01000946             818 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 103776tic ultra-conserved element locus
            uce-1754, sequence.
ACCESSION   KCPA01000946
VERSION     KCPA01000946.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 818)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 818)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..818
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="103776tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>818
                     /note="ultra-conserved element locus uce-1754"
BASE COUNT          272 a          176 c          134 g          236 t
ORIGIN      
        1 aaacttgaac attaagccaa taaaagaaaa cacaaaaaag aggcacatct gagctaatga
       61 aaacaaagac ctttactcat gtacaacctg ggccttcctg cactatttca ttgcacttac
      121 aaggggaaag agccctggtt ctattccctg aaccactggt ctcacgtaca actgaaaagc
      181 agcagaagaa agtcttcttt gctgtgctac tatacacatc agacatctct aattagacag
      241 caacaaaatt ttattaatag gctggacatt atggaatgag cttgttataa atgggccctg
      301 tcaaagcctt attcagctac caaatgagta ttctcagttc actgctcgca tctgaagcat
      361 caccgctggt gccggataac aaatgattgc tattaaccgt attgttagta atgatggctg
      421 aaaacaaaca aaaacccata aataacagtc tacagaaaaa ttaacccata aacttgatag
      481 atatccagct gagaaataat aaatgacact ttggatcctg ctgggagaag ctagtggttt
      541 ttgttttctt ctctgtcatt aacacatttt ctgtgctaaa aattagattc tgatatataa
      601 ttatcagtgc ttccagatat taattctgct atcgctccct ctgcttctct gctggttggt
      661 tgtaatgtta ttcacagatt actctgagaa aacacatcaa acacttaaca gagcaggtca
      721 aagtgacaag cagcttttgc tgacaacacc aacctgcaca gcctttttta ccccggacac
      781 aaaacaaatt tctcatatta attaactctg gtttcttt
//
LOCUS       KCPA01000947             750 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 103886tic ultra-conserved element locus
            uce-959, sequence.
ACCESSION   KCPA01000947
VERSION     KCPA01000947.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 750)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 750)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..750
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="103886tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>750
                     /note="ultra-conserved element locus uce-959"
BASE COUNT          255 a          141 c          131 g          223 t
ORIGIN      
        1 tgtgatagca tagatgttgt tattagagga agaaatatga catcccattt aatttcctct
       61 gaaacaagac aatctggctt accaaatata gcctgacaaa gaaaaataga aatttcctga
      121 tcaaagatcc aagagtgcag tgctccacct taaatccctc ccacctatta ggtccccctt
      181 tagacaagac agagaaacaa atttctcaca catcaatgat gcttccataa tcaatttcaa
      241 atagcccctt gcatagggat gcaaatctta gctttctctt aataaagcct tttagaagat
      301 ggatgtactg atctgatatt attaaacgaa aagtggtctc tttttaatct agagatgcag
      361 gggcgttagt aacagagtga atcaaaggcc tggtctcttt ctcttcctaa ttatcaatag
      421 tgttttataa tcttattaat attgatacac agtatactga agatctgtta acgtataatg
      481 tatgtggagg ataattaacg agatccgagt cagatcaatc gcctatttga cagaaaacgg
      541 tgtgtggctt ataaattata catatgctag gtatggctag aaatgtttaa agtttcagtc
      601 caatccttcc agtacagcac tgggaaaact gatgaactta aaggcacagt cccttgcctg
      661 ttaggtttat actgtacact cagaggaata actcttattt aaaaatcaaa gagttccatt
      721 aactgccaag atctcaaagc agcacagaaa
//
LOCUS       KCPA01000948             448 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 103989tic ultra-conserved element locus
            uce-1912, sequence.
ACCESSION   KCPA01000948
VERSION     KCPA01000948.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 448)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 448)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="103989tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>448
                     /note="ultra-conserved element locus uce-1912"
BASE COUNT          171 a           72 c           88 g          117 t
ORIGIN      
        1 aaaaaaaaga aaaaagagcc ttgcctaaaa gactacagta aatcatgaaa gtgatctcaa
       61 gtgaacagag atggatttct ggaatacggt gtgcaatgaa accactgacc tcttatacaa
      121 gggttcatgt ctttttctac agaaacagat gggtaatagc ataatgctga aatcatgctc
      181 tacataatat ggacctagtg attgcagacc tgattgcttg ccatatggtt gctgaagggt
      241 tgaagagaaa atgggatgat aagcaaaccc ttaaaagcaa catttttatt gaatggccat
      301 tacattaaaa cccaaactct gcaaatgaag gcaagaactg tggtgaataa tgatgaaata
      361 acaaaacaat aaaagaagaa acacaatagc atgtatttgt ttgcagtatg caaaataata
      421 ctcctcattt ttgccttgtg ttacgagc
//
LOCUS       KCPA01000949             386 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 104087tic ultra-conserved element locus
            uce-5189, sequence.
ACCESSION   KCPA01000949
VERSION     KCPA01000949.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 386)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 386)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="104087tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>386
                     /note="ultra-conserved element locus uce-5189"
BASE COUNT          141 a           87 c           69 g           89 t
ORIGIN      
        1 ctccatttcc taggcagaaa aattataccc ctgctgtgtt ctaatcaacc aaccatcatc
       61 aagacaatca aaataatttg cctaaattag ccaatcaaga caccctgcaa actgcagaat
      121 gcgaaaagct acaccagaaa tcatcagagt tgattattat actaataatc acgttaaaaa
      181 cctaatgaga tgaggaaatt ggaagcttgc tggagcaact ctctattacc tcaacatgct
      241 gggaactaat tatatagact gtaattaaaa caaaaacaaa cccaagccca ggccctggct
      301 aagttaatag ctggtccagt aatgaagggg ccgggatagc agacagtaat aaagactgac
      361 agtcccagag gtgctccttt gtagcc
//
LOCUS       KCPA01000950             449 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 104192tic ultra-conserved element locus
            uce-6263, sequence.
ACCESSION   KCPA01000950
VERSION     KCPA01000950.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 449)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 449)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="104192tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>449
                     /note="ultra-conserved element locus uce-6263"
BASE COUNT          169 a           83 c           67 g          130 t
ORIGIN      
        1 tataataatc ttgttcatag aaactctcac aaagaaaata attaatcata aacatactgt
       61 gatcccccta aagcagcgac tgttttaagt tgaaatccca taatggctat gacctctaac
      121 cctgatgtaa ctgtttctat cccggctact aaagtggctg ctcatgaaag gccatcaaat
      181 acagaagtaa atgcaaaggt taacaaagtt agtggaccaa acaaacttga tactgagaat
      241 gaactttcac atgtagcaag aaaataaaca ccactcttcc agactgatct acacaggagg
      301 tttgagatgc caaaatatta aatgttatta agcatataat ctctatttta cagataagtg
      361 tttactctag gggttaccat cctttcatat tgataaaaat tcttctctca aattaaaaaa
      421 gaaaaaaagt tcatgcattt tcagtgaga
//
LOCUS       KCPA01000951             440 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 104294tic ultra-conserved element locus
            uce-6640, sequence.
ACCESSION   KCPA01000951
VERSION     KCPA01000951.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 440)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 440)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="104294tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>440
                     /note="ultra-conserved element locus uce-6640"
BASE COUNT          134 a           88 c           69 g          149 t
ORIGIN      
        1 ccttgcttag aatacaaatg tttgcaataa tgcagtgaat cccaatttgg ttttgattgc
       61 aataaactgg agtcaaacgt gcaaaccttt gctaatttaa gttgatttta cctttatcgt
      121 tttgcatatt acatgatcta gagccacaca aacaaaagct tgtttggact taccatgctt
      181 tccttttcag aaaacagaat tcaaaaacac tttaaaaaaa tcagtatgtg taattgctaa
      241 cacctgctat gtgttactaa cagatgtttc ttacttacct aagggaactg ttataattac
      301 actctacgct tattggaatg gcatttaacc aagatagttt aggaacttta ggtggtgact
      361 ttgtgttctt tcattcatct ttccaacaac caggcctcct attcaccaag catcagcaca
      421 atgctctggg tattcagcct
//
LOCUS       KCPA01000952             694 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 104400tic ultra-conserved element locus
            uce-3860, sequence.
ACCESSION   KCPA01000952
VERSION     KCPA01000952.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 694)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 694)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..694
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="104400tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>694
                     /note="ultra-conserved element locus uce-3860"
BASE COUNT          196 a          151 c          123 g          224 t
ORIGIN      
        1 acagaaatgg cagacatctc attcagatca tgtttgactg atgtatttac atcccagatt
       61 atacttagat ttcccattct ccattctttc attctgtatc atatattcag gtttagccac
      121 tgctctccat gtggctgaga tctccctggc agggccaatc ctttggatct agtagttggt
      181 tttctgtctc attactgagt gaagcagttg taagttaatg taaatctagc aatccccaca
      241 tactgctctg atataatcac agatcccagg aaaagattgt gcagcttctt acctgcagct
      301 cctttgagac tctctctaag tggttagtta tcttttttat taggtcacta tacatctgtt
      361 ccgaatgctg ctggcataca cacttataca cacaactgca gaaacaaata taggaacaaa
      421 caatgaactt acaacagttt gcaatgaagg gtaacagact tcaaaacatt ttgttcaagt
      481 ttcaatttaa aggacaatag agttaattga atgattccta agcttggaat gagcttcagc
      541 aggctcttat ggcttccctg gaggctccgg ggtgtccatc ccatttttta acttccaatg
      601 agttctctta acagtgcact tctaaacagc caggacaact acttctggct tttgtctctc
      661 ccatgtgaat gaagaaataa gcagtttagc aatt
//
LOCUS       KCPA01000953             386 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 104499tic ultra-conserved element locus
            uce-3642, sequence.
ACCESSION   KCPA01000953
VERSION     KCPA01000953.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 386)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 386)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="104499tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>386
                     /note="ultra-conserved element locus uce-3642"
BASE COUNT          105 a           77 c           83 g          121 t
ORIGIN      
        1 acatttccac actttctcct gggttcatac aataaaggag ttaccctact ggctgcctta
       61 ctgaacagag acctggtatt gattacctat cacactggca tcagaactac tcttaggatt
      121 caattttttt gttgttttgc atattttatt gatcaaaagt ggtaaatgag catcaagcgt
      181 gcaagaagac gatgaattgt ttacttgcat aaaataacct ttcaataagg gaagatgcat
      241 tgctcacact tttggtgctg ttctgctgcc cgaagcagat ggcattcagc tgctattgat
      301 ttgctcctat agttacagag cagcatgtaa caaggcatgc tcatttctcc gaacgagagg
      361 tgaggttttt tgccagggtg gcagga
//
LOCUS       KCPA01000954             605 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 104605tic ultra-conserved element locus
            uce-3439, sequence.
ACCESSION   KCPA01000954
VERSION     KCPA01000954.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 605)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 605)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..605
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="104605tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>605
                     /note="ultra-conserved element locus uce-3439"
BASE COUNT          183 a          120 c           95 g          207 t
ORIGIN      
        1 cagtggactc taatacctct gatctcattt ccttcttata attgctgagc acacacacag
       61 tttaatatac gaacttgtac ctttcatatt gtcaggagaa ctatcagaat acttacacta
      121 aatccttgta cattttgcct cattttttac gtatctttcc cattcacata taaaacatgt
      181 cttttaatga tgtactttta gaaaagtcta attaaaattc aatgcataaa agcgtgcaag
      241 ggttgataac ccacagaact cagcagaccc tagttaacat tctaatgcat cctccatttg
      301 aagagagaca gtaagacttt tccacctcgg tggcagacac taatgatact tgcaaatatg
      361 actaatgtct tcattggtga aaaattaatg caccacaata atttttctac ctggggttaa
      421 tgaatatgtc agatgctgaa aatgagttgt ttgaaagtaa attactataa tctatattta
      481 gaagacactg ctctttctat ggtgtgtttg atgtcccctg cttgtttttg tcatgaattt
      541 tgctgtccac ccagtgagac tacactatgc tgacttttct aagggaatgt tttcctagaa
      601 tgccc
//
LOCUS       KCPA01000955             562 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 104714tic ultra-conserved element locus
            uce-5860, sequence.
ACCESSION   KCPA01000955
VERSION     KCPA01000955.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 562)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 562)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="104714tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>562
                     /note="ultra-conserved element locus uce-5860"
BASE COUNT          189 a          106 c          112 g          155 t
ORIGIN      
        1 ttttaaccca catttctgaa gatgcagcat tttcagaaat agtataaata cacagtataa
       61 aaaggaagta gacactttga aacagatgca ctggcgccct tttgtagcaa ataaacaacc
      121 tgggcactaa ggaagcacag actcaagcat gccactcatg aagcatttgc agagtcacaa
      181 aacgtcacag atgagccacg cagcagctga cctgataagt agaattagtt ggcaagtgct
      241 gcagtaactg agcgattgtg taatttctta tactagccaa cttagcctga tgtctcctta
      301 atcgaatgag aagcaatgtt agctcttcgg gctgcaggta tttagacaca ttgtaaagag
      361 gaaattagca gtcttcaggg agaggaacta taattacatt tttcacctca gtgcccagaa
      421 agcacttgac atgattaagc aattatttaa ttaactctgc atttggtcaa ataaaaacct
      481 gaatcctgta ataacatata ggctttgccg ggttaagatt aagttctcat tcgagttatt
      541 tatgctttaa ctaaggtgaa ag
//
LOCUS       KCPA01000956             387 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 104821tic ultra-conserved element locus
            uce-5974, sequence.
ACCESSION   KCPA01000956
VERSION     KCPA01000956.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 387)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 387)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="104821tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>387
                     /note="ultra-conserved element locus uce-5974"
BASE COUNT          128 a           72 c           81 g          106 t
ORIGIN      
        1 gtcatgatta ctacagacca gctacagatg caacatctaa aattttatgt tttcaactgc
       61 taaaatgtac ataatacaca cattattgca gtgtgccata ccactataat gatgttacat
      121 ggaaaatgta aacttatatg gcattagtta ctagagtagt tttggcccag tgacaccagt
      181 aggaaaaatg atgtccttgt tcagctcatc atatgggcac cttaaatcta ggtgaggaca
      241 aatggggagg tgatgtgcat gtacaggcag ggaacttatt gcttgacacg gatcaacaga
      301 gcacttagga aaccagtgca gtgggaaatc aatatgactc agggccagct cttactttgt
      361 gctcttttgc caatgccaaa aaaaaaa
//
LOCUS       KCPA01000957             800 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 104933tic ultra-conserved element locus
            uce-6703, sequence.
ACCESSION   KCPA01000957
VERSION     KCPA01000957.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 800)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 800)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..800
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="104933tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>800
                     /note="ultra-conserved element locus uce-6703"
BASE COUNT          260 a          156 c          126 g          258 t
ORIGIN      
        1 caagtttcct gcaatggtaa tgactgcttg ttagtgacac ttgggagagg aatacacaag
       61 ataaaacccc acagcatgta acttttcagg taatgtttat taaatattat ctttgtttca
      121 aagcagcgca ctggaagaac ttcgaaatga cttcaaagct tcagtgataa tttttgtgtt
      181 atattttagc tttatcacta tagctcacta cagatttgct tcaaatatta aacagactct
      241 ggctatagta gttagctgaa ttgtttatgg gatcaaaatc aaactaaacg ttcagaaaac
      301 tttcagcaag agattccagt taatgaaagc accatttgtg atgtgctaaa acatgtatac
      361 acataggtat tgccccattt atcagacatg agagctaatt acctcatcca ctgctatatt
      421 tcttccatcc tctgcatttc aattcccaat attaacacat aggtggtcaa gctgaccatt
      481 gaatagcctg catgagcatg aatgcattaa ataatttaat gttagaagag tttattaaac
      541 tgccacattc taatcagcat gcgtacctgc cttcattaat cttgcactgg tccatggtgt
      601 gtctccacag ccgacataga gtgtgctaat gttaatagga gctcttaaca aacaggatca
      661 gttaatcaag gaaaatttac tattagccac atgaccatgc ataccaaaat ctaattacaa
      721 tcagatttaa cctcttcatt actgtattca tccaaatatt ttttgttatt ccttgtcata
      781 ctgaaatatt ccaaactgag
//
LOCUS       KCPA01000958             790 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 105041tic ultra-conserved element locus
            uce-6528, sequence.
ACCESSION   KCPA01000958
VERSION     KCPA01000958.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 790)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 790)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..790
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="105041tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>790
                     /note="ultra-conserved element locus uce-6528"
BASE COUNT          225 a          153 c          174 g          238 t
ORIGIN      
        1 gcctcaaaag aattttcact acctccagat aattaaaaat taatgaaaag cgagatatcc
       61 tttttcctcc ttagagacaa aattcatgcg gcttgaactg tgacttgaaa gatttgaaca
      121 gccctttgac agcatcgctc tgtaggtaga tagggaagtc aaattgcaaa gtgggttttt
      181 agaaagcaaa cacaaaagaa cacgtcggca gcttttctgt tttttcctat cttcagataa
      241 cagtggactc aaattattgt gatgtgttga ttgattacag ccgttaagtt tcttagtaat
      301 cagtttcatc acttaattca cgcttgcacc tttgatttct cttccacaac agggtgatgt
      361 gggttgtcgt tgactaatga agaacagaat tggtttcggc gtgagacaaa cggaatgccg
      421 acaccaatcc caaaatgcat taatctttaa taatccacat ctgcatgttt ataaatgata
      481 taaccaggag ttgctaatgt taatgctccc cctttcaaac agaagctgac ataggagttg
      541 gtgtttgcaa actgcatgag aggcacgtgg ccgcgcgtgg tgcgtgtgac cttgcggagg
      601 gagctcgcca gatgaaagtt ctcggttgat taaaaataca taaagaattg cttcgcttcc
      661 gcaccggtct ttggagctta ttgttgtcgg gcaagatgaa atatggcatg atagatcttg
      721 tcttctaggg agatcagacc caccaaatgg tttttggaag caggtttgcc tcaaggtgct
      781 tttatccttt
//
LOCUS       KCPA01000959             469 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 105148tic ultra-conserved element locus
            uce-3200, sequence.
ACCESSION   KCPA01000959
VERSION     KCPA01000959.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 469)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 469)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="105148tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>469
                     /note="ultra-conserved element locus uce-3200"
BASE COUNT          142 a           85 c           95 g          147 t
ORIGIN      
        1 agtttgttct tctaagtctt ttaaaggttt cttgaaaaga taataatgat ccattttcat
       61 caagagcttt gaactgaagg ccctgagtat atagttagag cattaagggc agtatgggta
      121 gaacagccaa tcagagtaat gagtctccac tgcttgagaa atccagatta atctaaatca
      181 aatactttcc actatggcaa ttttaactaa ttccctcatg aaagtataag agatgtgtga
      241 aacccctaca gtcagcataa acctcctggt aggcctagac aggtaatacc ttttaagctt
      301 gttaatgtct tatcctgctg gtttctacaa ctgactcaaa gaatagctga gtacttctca
      361 acctgtcatt acagaggaaa gcaactttca gcatggggtt ggaaagtgtg atgctgtgtt
      421 ttgtatatca tggtaatggt agtatggcta gagctctctc cactgatgt
//
LOCUS       KCPA01000960             668 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 105261tic ultra-conserved element locus
            uce-2222, sequence.
ACCESSION   KCPA01000960
VERSION     KCPA01000960.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 668)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 668)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="105261tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>668
                     /note="ultra-conserved element locus uce-2222"
BASE COUNT          218 a          137 c          135 g          178 t
ORIGIN      
        1 ggaaacacaa tagaaaaagg actaataatt cttactgggc tactgggctt ctgcaaggga
       61 agaaatatca gttactggcc cgatagctga gtgcccttca gtgtcaaatc catctgaacg
      121 tgctcctccc ctttcagccc ctcttcatta caaaactgtt taacagcaaa ggtaatgtga
      181 tgcaacatat attttacaca tagatacaca catacaaaca attttttgtt tttgtttttt
      241 tacctaaatg caaactggat gaggatccat gtgatgaaag tgatggcggt ggcgtaagtg
      301 aatgtcctgg cgtttggctt ggcagaggca tgcctattgg acttggagag gaggaaaatc
      361 ccagactatt gtaaaatggc tgccctatgg gtgctaggct gctactagat cttttgtaca
      421 agtcagagct agtagataga gaatctctcc ttgtggcact actacttgca gaactgccaa
      481 ctgaagaaga aataaaaaga ccctaattac acagtgtcaa ctgaataaaa cctatcccca
      541 actacagctg ggcaacaaca gatgcgatca caataattac agcaatcgtt atgacaaaga
      601 caattactgt gataaccaca catgcttttt aaatctaagt gggtataaac ataccactgg
      661 caaataat
//
LOCUS       KCPA01000961             886 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 105369tic ultra-conserved element locus
            uce-2070, sequence.
ACCESSION   KCPA01000961
VERSION     KCPA01000961.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 886)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 886)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..886
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="105369tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>886
                     /note="ultra-conserved element locus uce-2070"
BASE COUNT          273 a          180 c          129 g          304 t
ORIGIN      
        1 taatttatgt tacaatattg ctgcagtgat atcagagaca aatgtttaat tcacggaaac
       61 tcagtttcaa accacagtcc ctgaatgcaa acagcagact tcaatttctt agttcataaa
      121 aatcaatttt tttacactgt acataaaaga ctgtggcatc aattagcctt aattcttttt
      181 ttttttcttt tttggaaacc tctttgtagg aaaatctcat atttcagcaa tttgcattat
      241 ccacacaatc tgctttgaag ttctaagtta tggtaagaaa aggatccact tatctgcaca
      301 taaaaaatgt tcaaagctta taaattccct gaaacagatg tacattatca ttggatttgc
      361 ctttctctct ttgctgttgc atggctaata gagtttcatg tgccccctca catcctcccc
      421 atttagcatc ttttctctac agaagcatgc accctactgt gccaatccac acttcaaaga
      481 tttctgtcta tctattagaa acaaagcaca aagtgagaac atatggcccc ttttaaattt
      541 cccacattta agtcaatatc gtttcttttc tcctttggca aagaaacata ataaggttta
      601 tcttctccct tcctaaatct gctggctctc tcaaactgct tgtgccaatt cagcagttac
      661 tttgcagtat cagacttggc agcacatatg aaaacaaaat ctctaatttt ttaaattgct
      721 tttatttctt cagatcaaga agatgcattt gaatgatgaa aatgtaactg cacactttca
      781 gataagtgga ttttaaaccc atgaaagggc acaacagaaa gtcaacagct gttcaagttc
      841 tttttatggt gacatctttc ttagggatgg aagagtattc tggaat
//
LOCUS       KCPA01000962             863 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 105481tic ultra-conserved element locus
            uce-290, sequence.
ACCESSION   KCPA01000962
VERSION     KCPA01000962.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 863)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 863)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..863
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="105481tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>863
                     /note="ultra-conserved element locus uce-290"
BASE COUNT          243 a          144 c          200 g          276 t
ORIGIN      
        1 ttaaagatta atttaataat ctcagctggg tgaagaagag agcagattag gcatggacaa
       61 accataccaa agcttcagag agtgaagatg acagtccagg ggtagccact gctgacttta
      121 ttctagcggg gacatgactg atcttttgct cagtttgatg tatgaagaag gtacaactta
      181 taagacatgg tactccttta gtaaccattt aaatgaagat taaagttatg gagttggaga
      241 gtatttttct gttttatgat ttagcaattc aggctgaagt ttcttttgtg gtttttatac
      301 aggcagccta gaagatggac atttgacagg cgacaataga ctgctccttt cccaggtatc
      361 tcctgcttgt ttcctttatc tgtgaatagg aaatggctta aaggcacctg tgttatgaag
      421 gtcccagggg cagctgcctg actagtgaat gcctgattat gtgttaacat gctttgtcag
      481 atattggcag aatctgttct cttcttttgc cttttcagca agggtaccat tgacagactg
      541 gctacccatt tatagaaatg ttgtccatca aactgtgagg aaggacaatg gtgtttttct
      601 gtgaccagtg actgtgggaa acttttcttt ggctattcag gcaatttttg tagcttgctc
      661 tgaagaggag agactgatga gtgcaaaaag tacaattaag caaagccaga cttcaattga
      721 aggctgtagt gtagtctgct tgttctcaaa aaaaatctat gggttttcac gttgctgtgt
      781 ggcattcagc ggggggctat tacaatccta aatttttttt ctagaccacc taattctaag
      841 taaaaattaa atgtaatgag agc
//
LOCUS       KCPA01000963             362 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 105591tic ultra-conserved element locus
            uce-6499, sequence.
ACCESSION   KCPA01000963
VERSION     KCPA01000963.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 362)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 362)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="105591tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>362
                     /note="ultra-conserved element locus uce-6499"
BASE COUNT          118 a           77 c           71 g           96 t
ORIGIN      
        1 ccacaataaa gtgattctgc tgtggagata gcaccaggtg cacgggggtg acctcacaca
       61 cacaccaaat cgggagctga catccatcac actttgaaat tttggatttc atcatttcct
      121 gatctttcta aagggatcac agcacctggc cctcacagct gtagttcatt tagaaagcaa
      181 tttaaaaacc gagaaaaaag caaatgacat cttgctgcct cagccttgtc attaagtata
      241 gcagaatggc cttcatttat gagacacatg gctaagaatt aatatctttc agtgctttct
      301 caagttgaga ttacaaaagg tttgaaagac cactaaataa ttaggactat gactgaggca
      361 ag
//
LOCUS       KCPA01000964             633 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 105701tic ultra-conserved element locus
            uce-2252, sequence.
ACCESSION   KCPA01000964
VERSION     KCPA01000964.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 633)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 633)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="105701tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>633
                     /note="ultra-conserved element locus uce-2252"
BASE COUNT          144 a          151 c          105 g          233 t
ORIGIN      
        1 ctttggtgcc tttttaacaa tattttctct tttccttctc ttcccatcac ctttttgctt
       61 ttatttcatg tgtttggttg tggctattcc ttacgttctc ctcctcatcc cacctctgcc
      121 tatccacatc caccatttca tttcacctat acatccttag catggcaagg cactgacctg
      181 atgcataatc acgtcttggc tgatgatgac caatcaagtc tagactcctt gggtcgtcgc
      241 agtagtcttt ctcgtttgga gccttcagac ctctcagaag actctgacta tgacagtata
      301 tggacagccc atagttacag aatggggtct acatctcgta agagctgttg ctcatatatc
      361 tctcaccaga actaatgcac ttctgagctt tttcttaaca aatgcttgtt gtatcacagc
      421 ctgcttttct tagatgtttt cttgctgttc cttgtctctt taatgtgata ttttaacaac
      481 ttctgaggga gctcctgaaa cttcagttat acctggtgga aggctctatt gtcaattcag
      541 tacacctaca aataagtcat tctaaaatat cctgttaagg atcatacttc ttgagggttt
      601 tttaactgac agatgttaat ttgtagctct gaa
//
LOCUS       KCPA01000965             481 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 105807tic ultra-conserved element locus
            uce-5761, sequence.
ACCESSION   KCPA01000965
VERSION     KCPA01000965.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 481)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 481)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="105807tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>481
                     /note="ultra-conserved element locus uce-5761"
BASE COUNT          165 a           95 c           81 g          140 t
ORIGIN      
        1 actttgagaa tgagaaaatg gcaagtgatt ttacttaatt gttccttact ataactttca
       61 ccctatgaca ttaaacataa gctctttttg aaaatagtca ttaacctttt gcatgatgta
      121 taactagctt tatcactccg gttccacttt gagttctgaa aagaagatcc actgggagac
      181 acacaaatgg taaaccacac cgaaggacac aaaaaggccc ataaaacatc agtaaggtta
      241 taaaggtcta tggattttaa ttgctgtgtg ccattgggcc tttacaaagc aatcaagcag
      301 gcaatctccg aagagaaccc tgccataata catttaacaa tagagttctc gccccatcag
      361 cagactaggg tttatgaagg tcccaattgc aattaatgac cttgtacatt ggacaaaatt
      421 acttaaatta actacccttt ttggatacat atctgagtat cagaaagtgt aatttcaaga
      481 c
//
LOCUS       KCPA01000966             523 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 105917tic ultra-conserved element locus
            uce-4044, sequence.
ACCESSION   KCPA01000966
VERSION     KCPA01000966.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 523)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 523)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="105917tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>523
                     /note="ultra-conserved element locus uce-4044"
BASE COUNT          116 a          114 c          139 g          154 t
ORIGIN      
        1 ttttgctgtc ctatcacagg acacgataat ctcccgtatc ccgtcccggt aacccagaag
       61 cctcctattt tgcatattgg gggcaggaga ggagataagg gcggcgagtt gagccgagtg
      121 ggaactgctg actgacaaag tgtgtagtgc agcatttctg gctctctaat tatccttttc
      181 cttcttgact ccagtatcac atgtagccat gtgtagaatc ataaaataat tatgcagtgt
      241 acaagctttc tgggagcatg taccactgtt ttcctaattc tttatcgctc ccattgatcg
      301 tggcgtgtgt gcattgatcc aagtcggcca tctggttggg gaagataagc gtgcgagtgt
      361 ctttgcattg cactgtcact cagggagggg ggtacatttt ggctgtaggg aattacaggg
      421 gcaggattag ccctcttcct aggagtaaac tgaattttaa atgcagtgct gcagctgcat
      481 ggaccatgtc gctaacttct ggttttgccc gtagactggg tgc
//
LOCUS       KCPA01000967             654 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 106023tic ultra-conserved element locus
            uce-750, sequence.
ACCESSION   KCPA01000967
VERSION     KCPA01000967.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 654)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 654)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..654
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="106023tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>654
                     /note="ultra-conserved element locus uce-750"
BASE COUNT          215 a          101 c           95 g          243 t
ORIGIN      
        1 aagttgttcc tcattgatat tttgttgctt aaagtataat ggcgtaaaga taattatttc
       61 agttagtttt gtatctctgc ttttccagac actgatctca aattgccttt ttcatgctag
      121 acaatataat tttaatagta actgtagatt taagataaca ttattccttc agcatggttc
      181 ctatatacat gcatcttttg aatcaataca attaagcttg tctcctgttg gaatccttgt
      241 aattattttt cttgaaatac ttttcctgta atgatattga agttaaagta atcaggttac
      301 tggcagatca tgtaaaattc aactcaaaat tgctggctgc ttgattttaa tttgtctgac
      361 atcaagtttg tttgaaaagg gataatatgt ggttaaacca aggagcttat aattatggtt
      421 gacatttgtt tgtttataat gaaatctaat taaagttcat acattttaaa acaccaaagt
      481 taattactga attgctcact tcacttatgc acagcagtca aattaacttg cagaacaatg
      541 acaaaagact atgcataata acaaaatgcc cagctgatct tggcaataca aaacaaattt
      601 gccatgataa tattctagaa gtgctttatt aatagccatc ctatattttc actg
//
LOCUS       KCPA01000968             454 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 106134tic ultra-conserved element locus
            uce-1058, sequence.
ACCESSION   KCPA01000968
VERSION     KCPA01000968.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 454)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 454)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="106134tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>454
                     /note="ultra-conserved element locus uce-1058"
BASE COUNT          143 a           81 c           83 g          147 t
ORIGIN      
        1 aaaagcctaa ttttatgtgc ctgggagtag ctgtctgagc ttcaggcaat acaaacgctg
       61 ctattactgg ggagtaaaag ctctgcataa ttaacaaaca tcatcagcct tacagttcct
      121 gtagaatgta gtaagttcct tgcctgaagg ctgctctcag cctagtaagt ctgtttaccc
      181 tgtccaagat tagattagtt taattattat gaaaaagact gctaagatct tacagcctaa
      241 ttatgcaaat gtttctaaat gttcacaaaa gtaatttatt tatttggaga taaatgaatc
      301 tgttttgtca taaaccagat tgcagtcctg gcaatgtaca agcggggtta tgtgccctta
      361 ggcatatcct tcaccacaaa tatcagtggg acccctggat tacaacattt ataaatacat
      421 aaatgttttt tagcaggttt tataaattat agta
//
LOCUS       KCPA01000969             619 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 106245tic ultra-conserved element locus
            uce-1582, sequence.
ACCESSION   KCPA01000969
VERSION     KCPA01000969.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 619)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 619)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="106245tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>619
                     /note="ultra-conserved element locus uce-1582"
BASE COUNT          202 a          115 c          105 g          197 t
ORIGIN      
        1 aaggagtcac tgaaaaatgg agtgttgatg tacatttgac ttcaaagaat gcatggattt
       61 acatgatgca aatattatcc ctataaatac ttgaatataa ataagcagaa atcaacagca
      121 atgtcctcat taaaaatcaa cccccaatat tttatattaa tgctgttgag ctgcccataa
      181 aaattatttt aatcttcaaa ctgtggcaat tctataaaac tacaagtttt gctcctgagg
      241 gttccttttt ttaacacctc tctctaatct gcccagcctg ctgagtagca ttgacatcag
      301 tagtacatca atttcagaaa gtggattatt tttactagac agctattgtg acatattggg
      361 tcagtcataa atgaaagata ttcatgcaag catgcaatac ttgtaatgaa gtctcactct
      421 gaccttctgt atgattgatt ctgtaattta gttttttcag gcagtgcctg aaatgaaatg
      481 aaatcatgtt gaacaagttt tgaataccca cagtgcacca ggagaagaaa aatctgcagc
      541 cccagaggct tgagagagag cagctgaacg atttatctcc atgctattat agcctttgcc
      601 agcattcaac atttctttt
//
LOCUS       KCPA01000970             848 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 106356tic ultra-conserved element locus
            uce-550, sequence.
ACCESSION   KCPA01000970
VERSION     KCPA01000970.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 848)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 848)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..848
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="106356tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>848
                     /note="ultra-conserved element locus uce-550"
BASE COUNT          270 a          106 c          193 g          279 t
ORIGIN      
        1 attattggga attagtttaa attgtatgaa aatgatgctt ctgtaagcaa tacagagaga
       61 agctaatata cttatttatg ttaaaacatg tattttgttt gagagaaaca aacagctatt
      121 aaacactaaa tcctacaatt cagggtgggt ggggaattaa gtaggctgtg gaatgctact
      181 ctgacgtgca gtgttgtgag tttacattat agtggcagta tccaatcatt tttaattctt
      241 ttaattactg aactctctgg agtacataat ggtgtggaat atacacatgt atctgtaata
      301 aacaacatgt atctcgaaga aatggattta gttttggcaa caacgtgata gggagatcaa
      361 agagctagct ggcattaaaa tgatttagat acatttgtca taggcagctg ttatgctaat
      421 ctcatttatg cagttgtcag ctgataggtt ctgatgagcc agcttagtgg gaaaatcatt
      481 agtagatccc tattgtgata aatgttattt attactgtca aatggtatta atgtttgatt
      541 caaagatggg aaatgggcat catctacatg aagttcatcc attcatggtc aatgatgaca
      601 aagggagctg ttgaattcca gccaaaggaa cttcatttct gtaagaaaaa agaataatgg
      661 atttaatttg catatgtttt aaaagggtaa tgaagtaata tgatgtttat cttggttgaa
      721 gagtggtaat ttttgctggc atggctccag caacatttga gtcattgtgc agcatttgct
      781 gttcagttgt tggttgtgga aggggctttt caaagcagca ggtgcataag gggggagaaa
      841 ctaaaatg
//
LOCUS       KCPA01000971             605 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 106465tic ultra-conserved element locus
            uce-6719, sequence.
ACCESSION   KCPA01000971
VERSION     KCPA01000971.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 605)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 605)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..605
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="106465tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>605
                     /note="ultra-conserved element locus uce-6719"
BASE COUNT          169 a          108 c          149 g          179 t
ORIGIN      
        1 agtaacattg gtggtattct ctgcaggtag ctctgaggat gtgaggctgc cctcgctggt
       61 gacctcataa tttccagaag caggtggagg tggcaattat agctatggcc actatcttga
      121 accttctata gtaggtgatg aattgtaaat ggctagaccc ggtgcacaac aataaactca
      181 aataaatctt caatgtgtaa taatgacaag actgaaagac tggcagttat aacaaggctg
      241 ctgttgtcac ccactttact gtagccttga tatccatcat tatcagctgg agctagctca
      301 agagtcggac aagaaggtct gaagaaggat gagttgtttg cgctgaagcg tccagtaggt
      361 cccatctggc agagagtaaa tgggattttt ttgcctgttc actgggccag agctgtccat
      421 cattttgggc agatatctga tcacttcatg ctgtgggaca atatggcttt gtgctgtttg
      481 gtacagcaat ggcaattaaa ataactaaat ttttcattta tttcaagctt ttgttttagt
      541 tagctgaagg tgatcctaag aagggatctt tacattagaa gagcgattca ggaagtcaag
      601 tgaga
//
LOCUS       KCPA01000972             535 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 106662tic ultra-conserved element locus
            uce-3368, sequence.
ACCESSION   KCPA01000972
VERSION     KCPA01000972.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 535)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 535)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="106662tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>535
                     /note="ultra-conserved element locus uce-3368"
BASE COUNT          172 a          109 c           89 g          165 t
ORIGIN      
        1 tcactgaaag taactgtctc actacacacg atgctatttc cacttgcaat tagcttttat
       61 tgtacaatgc tgccaggtgt ttagaagggc ttctctagac actcagccat taaaccaagc
      121 tctgactatc aaaaaggctg cttaatttat ttttaagatt ttaaaatatt cctattccat
      181 gacagacacc ctttcaataa ctgaatttaa taaagatgta ccttatcagg ctgtgcagat
      241 aacatgaagt cctagtactg atgctgtaca atattcttca aacagattag caggatgtgt
      301 gcttcagcaa atttattctg tctatctcca ctgaatcagc tgtctgctaa tgcttgtaca
      361 actcatacac caacagtgtt atcataaaca cagtttaata gaggtgactt agtgaggcta
      421 aatataatat tccaaaatga accgaaggct aaggtattgt ccaccatctc tgaaaaataa
      481 ttaccgcatt ttggaatcca ccaagacagt ctgtggttgt caaaagaggt ggcta
//
LOCUS       KCPA01000973             665 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 106768tic ultra-conserved element locus
            uce-7125, sequence.
ACCESSION   KCPA01000973
VERSION     KCPA01000973.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 665)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 665)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..665
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="106768tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>665
                     /note="ultra-conserved element locus uce-7125"
BASE COUNT          179 a          118 c          117 g          251 t
ORIGIN      
        1 ggtgatattc ggtgcgtggt tgtttactcg aagttgcaag catcaccttt gatttcaagg
       61 gtggggatgc cctaagagtt tgttccagaa ccagttggtt acaagtgcac ctcttatata
      121 tgccttacaa acttcagagg ccatattcaa aacagggttt tatcagtgta tgcaaggggg
      181 tgcaacccct cttctcttcc tccccaggtc aaacagtatg gacagttttc acacatatct
      241 acctgtataa ccctctgtac ctctcataac tggtcaatga ctgtaacagg ttacatcagg
      301 tgttttttct acatactttt tacacaaatt ctatgcgatt aatgtaactt aattcaatgc
      361 atcattttat tgtactagtt cttaagcttg tctttatttt tttttctagg tgactgtggt
      421 ttcttgtgat ttttattgta taaataaatg aggtggctgt tgatgcttac tctctgttac
      481 taagaatttt tacctttttg gaagaaagca ttgctatgaa ctaatgaatt taaaatgtca
      541 tttactcatt gtaaatacag tattgtgcaa cccttttcat tcatttgaat tgctagtgtt
      601 aactgaattt tgtctagaca ccatttctgt tgatgaaata aagacatatc attatgtatt
      661 gtaaa
//
LOCUS       KCPA01000974             358 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 106872tic ultra-conserved element locus
            uce-4401, sequence.
ACCESSION   KCPA01000974
VERSION     KCPA01000974.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 358)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 358)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="106872tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>358
                     /note="ultra-conserved element locus uce-4401"
BASE COUNT          132 a           85 c           52 g           89 t
ORIGIN      
        1 tttttgcagc cccaacagca cttttcacag tcaggattat tctccacatt gttgtctgca
       61 gtcaaagtca ctcaaaaatt cctatggtcc cagcagcact aaaaatacat aacagcctcc
      121 ttacaataat ggctgtgaat cacagcattc ctcagctgac ataagtagtt aaaatagttt
      181 aaaaaaaagt taaaataaaa ctttttaaaa gttcaagtga aaaatgaaaa aaggttgaaa
      241 aggactcccc taccgtctaa caatattaaa gtctgcctca aatttacaaa cgtactcagc
      301 aacatcaaac gcgccggctt caaacacacg cggcagcttc aaacctggca gcttcaaa
//
LOCUS       KCPA01000975             497 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 106974tic ultra-conserved element locus
            uce-738, sequence.
ACCESSION   KCPA01000975
VERSION     KCPA01000975.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 497)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 497)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="106974tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>497
                     /note="ultra-conserved element locus uce-738"
BASE COUNT          137 a          116 c          112 g          132 t
ORIGIN      
        1 tgcaaggaaa acacttccca ctctactaac ggctatggta catacttcat ttttaatctc
       61 tggaacttag tggttgctaa atcatgtaga agtatagaca caacccctag cactgctgct
      121 cttttagtgc ctgtgacctt gaagctgtga tgagccaggg agatgctgca aaatgtacag
      181 gctccaccag atgagggact ttgatgctgg ggggagctct ggggtcaagc acagaaaggg
      241 gaaataaatg gtaaaatcac tgtctctaga ctcctcagat aaaatggaaa caagcacttg
      301 gcattttcag tgctgacaac ctggcttgtt tgttcactct aatgagcact ctggctccat
      361 taatgagcag actgaatcca ttatcatcat catttcaaaa ggcagcgtgc cactaaatag
      421 cttcccatat tagcaggcat tgcccttgtt gttccatttg atcagcagtg gcagcaggga
      481 gcccgctgta ctcccac
//
LOCUS       KCPA01000976             507 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 107076tic ultra-conserved element locus
            uce-7205, sequence.
ACCESSION   KCPA01000976
VERSION     KCPA01000976.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 507)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 507)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="107076tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>507
                     /note="ultra-conserved element locus uce-7205"
BASE COUNT          122 a          117 c          128 g          140 t
ORIGIN      
        1 tttttctagt tccagttggg ctggtgggat agtgactgtc tcagtgcaaa ggtctgaggt
       61 gagcagcagc ttaaaaaggc tatgtggcat gtgaggaagc aagttagctc ttaatcatat
      121 catattggcc tcctttgcgg ctgatacatc tgctgtaaaa cgcttagtgc tgagtgcctg
      181 attgggcagc ccatgctaag tgttcaaact cctgctgcct tttttcttca aacaatatct
      241 tctggcttcc agatttctga taaattgata agaggaattg cgtgagtcaa tagagttgta
      301 gacactttgc caatataacc ctagcgctat tgatctgcca gtaaattaaa gtcttactta
      361 gaggctgccg atatttctaa tctcctgcct caccaattac accctcccag ctacctggga
      421 aagacagcga cgggagacaa ggctgcccag gcttttccca gcggcagccg agggggcagc
      481 ggtggcaccg ggcccgttgg gaatgct
//
LOCUS       KCPA01000977             702 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 107186tic ultra-conserved element locus
            uce-7629, sequence.
ACCESSION   KCPA01000977
VERSION     KCPA01000977.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 702)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 702)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="107186tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>702
                     /note="ultra-conserved element locus uce-7629"
BASE COUNT          230 a          109 c          121 g          242 t
ORIGIN      
        1 ctcctctgaa ccagttttta taatgtgcat ccttaactga caataagtaa ttggaaaaga
       61 atttttgtat ttgtaaggat tgaccttgac attgtttgtg taggcctcca aagcaattat
      121 tgtagaaact gagatggaaa acaaaaagca gacaggaatg cttgaattag tgcaaatcac
      181 aaacataact gaatggtatt agatgacagt ttgcttttaa tgagggaaga cacgaagtaa
      241 ttaaatcttg acatacaatt atgaaaaata tcaggtaaca agcctgctat gcaatataaa
      301 ataagaaaag acattttctg aaaacttgcc tgatgctctg tcatctgaga ctgttcttta
      361 tgagtgcagg gtgaaggtca aggaggtatc tcaactccat caatcctttg gacagttaca
      421 aatgaccttt cacttttcat aagacattca atattctgaa tgggggggat acatttttct
      481 gtgtttagaa aatagcaaaa ttgaaacctt ttacagtgca caaggtgcat ttgtgtttgc
      541 atctcctgaa aagctcattc atttttaaat gttcgttgac accaatatct catttacatg
      601 aagtaaacat tttaaaatgt tgcatctgtt tcaacatgca ttttaacttt tcatattttt
      661 attgcatttt ttttcaaatt ttttttttaa atgctgtcgt gc
//
LOCUS       KCPA01000978             675 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 107297tic ultra-conserved element locus
            uce-6071, sequence.
ACCESSION   KCPA01000978
VERSION     KCPA01000978.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 675)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 675)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..675
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="107297tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>675
                     /note="ultra-conserved element locus uce-6071"
BASE COUNT          191 a          172 c          170 g          142 t
ORIGIN      
        1 tcacctagaa ctactgcaaa gtgtgagaac atcattctgg tttcagttcc aagataactt
       61 aatgttcttt aaggctggaa gagaacatag tttcattaca actgcacata tttttgtatg
      121 aaatgagcat ctcaaggcaa gggaaagaaa gcagcattgt tccagggctg tttttcacag
      181 gcctgtattc atatctcatc cttgttgttt gcaggagagg cagatgtgaa ccagaacaat
      241 gggacctcca cgaagagccc agcggtgaca gactccaaag gcacagcaga cccgaagaat
      301 gcctggcctg aggccaaccc agctgacagg actggtcgcc cccacttgat ccgcctcttt
      361 tcccgagatg ccccaggaag agaagacaac accttcaaag atcggccctc agagtcagac
      421 gagctacaga ccatccaaga ggacagtgca gcagcttcag agaattcgga tttgatggct
      481 tcacaaaaac gctcctcttt ccggcacgga tcaaaactgg catctgcgag cactatagac
      541 catgccagac atggatcccc acggcacaga gactcgggtc tacttgactc gctgggcaga
      601 ttctttggag gtgaaagaca cgttccccgg cggggctcgg gcaaggtgag ctctgaggaa
      661 tagagaactg caagg
//
LOCUS       KCPA01000979             616 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 107405tic ultra-conserved element locus
            uce-3068, sequence.
ACCESSION   KCPA01000979
VERSION     KCPA01000979.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 616)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 616)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="107405tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>616
                     /note="ultra-conserved element locus uce-3068"
BASE COUNT          188 a           98 c           96 g          234 t
ORIGIN      
        1 acttaatttc tagatattaa ttgaatacta ttttaactta ttctcatcca gtaccagaca
       61 gttggttttg atatggaatg tcccttttat agacttggca aagaccatca gtttatggcc
      121 tgtttcgttt cttgccagta gacagcactg aaagttataa aactaaaaca attgctttca
      181 tttatatctt ttcctgatta ctgtgatagc tgaaatgtct gaagaagttc agaatctgta
      241 aagcctgtca cattatagaa acatgtctct ttaaactaaa tgtgaaattc cagtaattga
      301 agtgataaat ctactgtttt tgctggggta cctttgatga gaactatagt agtaaattag
      361 aaattattct ctgctgttat atcatggtaa aagcctttcc attatctgtt gtcagtcact
      421 aggtatgggc aaataactca gttgtcaatc taactgtgaa accttaagtt ctgggaataa
      481 tcaataaggc aaaaaatctg tattatcttc atgtaattct ttagacaact tgaagttgtt
      541 ttttcccttt ttatttctgc acatctcatt tattcacaga tgtactggat atcttagaat
      601 atttcatttt ttatag
//
LOCUS       KCPA01000980             680 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 107518tic ultra-conserved element locus
            uce-4891, sequence.
ACCESSION   KCPA01000980
VERSION     KCPA01000980.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 680)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 680)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..680
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="107518tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>680
                     /note="ultra-conserved element locus uce-4891"
BASE COUNT          261 a          109 c          108 g          202 t
ORIGIN      
        1 aataaaattt actgttctaa ccaaagatat tttatataaa ttaagagttt gtttaaaaaa
       61 aatcgaaaat gggaactcaa ttctagacaa cacttaattt aaaataagtg ttaaaataaa
      121 agcaataaca ctgagaataa attaatgaac tacaattaac tatatttaca ataagtggtt
      181 tggttggaaa cacctattcc ctatactgat aaaataaaac ctgcattctg caaaagctga
      241 aataagttaa atgaagatgc ttttaacaag gttattactt aagcaatgac aggtttacag
      301 attttagcac cattgggttt tcacaggagc tgcagcaagt gctaaaataa cacacacctt
      361 caggttcatt aaatccacca gtgtgatgaa ataacttttt ctatattact acagtgcctc
      421 aaagaactga ctataaataa gatacactaa taacaactgt ttgcagtagt aaaacaataa
      481 aataattctt ccaggcttat atgcaaagga agaaaaggca gactgttagc agagttatat
      541 ctggtgactt taattctact ggtgccatgc cttcagccat ttacttgtca tagaaatgcc
      601 ctataaaatg ttttatcact cattgtggca ggaagaaatt tgtttaaagg ctgcataaag
      661 agggggctcc cgtcccgaaa
//
LOCUS       KCPA01000981             893 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 107626tic ultra-conserved element locus
            uce-415, sequence.
ACCESSION   KCPA01000981
VERSION     KCPA01000981.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 893)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 893)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..893
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="107626tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>893
                     /note="ultra-conserved element locus uce-415"
BASE COUNT          328 a          155 c          130 g          280 t
ORIGIN      
        1 atcttcaatt tataatgtca catactttga aaaacaaaac aaatatttac tacacaagaa
       61 gtcaacaata aattttttga aaatcacata tgcaaaaaaa atctcttaat ttgaaatagt
      121 gattacagca cctacatctt actgtgtttt tgttaatgcc atgcgacaat ctaagaaaat
      181 aaaccacagt tttcttatat caatgtaaaa aattactgat ctcaacttgt tagtttacaa
      241 attgtagata attgtaaatt agggtaagca aagcatgcaa atctatagat tctatatctg
      301 aattcctaga ttagcattaa aaccaatcac cgcaacaaat acctcaacag tatgccttgt
      361 gtgcagaaag gaagcgatac tgaacattca atgccacaac tgtaaggttt tcggagaagc
      421 acctgtggca gtttcagcag tttctatatg gaatgctccc cctttctagg attacttgaa
      481 aaaatcaagt caattcgaat tacgtagctg taaaacattg acatgtgtag tttttacagt
      541 ttcagaatct tctgtttgat ttaaacgggc aatggtgcat aaacaggaaa cttataccat
      601 aagggatcac atatttgcag gcaacattaa gatttacatt aacatacata aagtgctgta
      661 gcacattatt caatatgtaa gccattatca tgtgaccacc ttaacaacaa gacactaagc
      721 cttttatgcc tttaaaagca aactttcatc ctgaaaccag tttttcagtt cttcactgaa
      781 atttatatag aatggattaa agttactggt caactcatgg cttcaattac tttaaattta
      841 gtaggctgta tctcaaaaga attagtagct aaaaattagc agatacaagg att
//
LOCUS       KCPA01000982             650 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 107737tic ultra-conserved element locus
            uce-3211, sequence.
ACCESSION   KCPA01000982
VERSION     KCPA01000982.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 650)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 650)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..650
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="107737tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>650
                     /note="ultra-conserved element locus uce-3211"
BASE COUNT          200 a          121 c          126 g          203 t
ORIGIN      
        1 gaaaaaaagt tgtagtactt gttccttcca ttccaagaca tgctaagcaa gtcacttgcc
       61 cttccttatt cagagtgaaa atactttgat ccagttttct gaagacagta ctcatttcat
      121 aagaatattt aatcagtaga aaatagagag gatttagttt gtttgtttag tatttaacca
      181 agtgaataag gcagattagg ggaactggac ccataaacaa ggtgatatat aatatttttt
      241 ttcgttctcc ttttaaataa ataccgatca gctttatgtt cagagacaat aggagccgtt
      301 ggcttaaatt tgcagtttac tgtatttatg gctgtaatat caaggtgctg ccgtcgtaat
      361 ttcatgcccc aatgagaaga gcaaggtcga agcaaatgct tccatcggca tctgctaaca
      421 cactaactca taaacaaggc ccggctggat caggtggcac ggaataatac aggctaatga
      481 aatacagcac agctttccat tactgttagt ttttacagtg tcgtcattac gtgtaattta
      541 tgtttaaaaa attcaatttt atacaaggct ctgggaaata ggggtctgca ggtcacccga
      601 cgacttttaa cggctctgag agtccttatt gcactctact gttccaacaa
//
LOCUS       KCPA01000983             690 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 107849tic ultra-conserved element locus
            uce-4327, sequence.
ACCESSION   KCPA01000983
VERSION     KCPA01000983.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 690)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 690)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..690
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="107849tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>690
                     /note="ultra-conserved element locus uce-4327"
BASE COUNT          221 a          160 c          121 g          188 t
ORIGIN      
        1 atcgtatatt tcacattaat catcttgcaa aagctaaata aaacattaat tagaatttta
       61 tctgtgtagg tacatagcag ctactgacac tgatgtcagt aaccgaatag aatacagaga
      121 attcagttaa tcatctcctt acgttgccat tggcacataa atttgtctca ttagcagggg
      181 ctacttagtt cgctgtagta aacaaagctg ctgatcctcg cactttttct ttccttagac
      241 ttctagcatg tgccatagaa gagccaaaac attcctggag tgtcacaata tgtaatacaa
      301 taaaacagat tacaaccata cctttctttc acagcagtgg tgccaagcac aggtacactg
      361 tagcaatcaa tttgttctgc agacagtaag gctttcatag aatactaatg caaaacctct
      421 tttctttctc cttcgacttg actccccaat gcctgggtcc cgaccaatac aaggaggagg
      481 gcagaatgtc ttctgctgag ataaccacaa ctactaatca agtatacgtg tacaagggca
      541 caggattaaa cctccaccgg gcttgactcg ggcaccgaga gcagctcaac acatgcacag
      601 caaggtcaga attaaacaca cacacacacg agtgaactaa tttatacact ttaccatttt
      661 tacctcggga gtaaaattac atcctggtga
//
LOCUS       KCPA01000984             187 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 107954tic ultra-conserved element locus
            uce-2932, sequence.
ACCESSION   KCPA01000984
VERSION     KCPA01000984.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 187)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 187)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="107954tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>187
                     /note="ultra-conserved element locus uce-2932"
BASE COUNT           71 a           26 c           30 g           60 t
ORIGIN      
        1 aaaaaaagga ctatgaatga ccaaagacta acatttataa ttttatgtag aaacaagcca
       61 tgttttgcat ttggatagat ttaaatgaat taaagctaaa aattaaaaag cacgatgctg
      121 caacatctgg tcacttgttg aagacctcac ttttaaagtg gttaaggcac aatttgtact
      181 tttttct
//
LOCUS       KCPA01000985             418 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 108062tic ultra-conserved element locus
            uce-1867, sequence.
ACCESSION   KCPA01000985
VERSION     KCPA01000985.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 418)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 418)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="108062tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>418
                     /note="ultra-conserved element locus uce-1867"
BASE COUNT          118 a           81 c           76 g          143 t
ORIGIN      
        1 tttactcaag tttatgtgca gaatattttg caaatgtgag ccatgcacat gcagacaccg
       61 agtgtgtatg tctgtattta ttgatatctg ccacagtcaa aacacctcaa aaggttttag
      121 aattttaaaa actaaagtct catgtctcag ttgtatgtag tgccatctga ctgaagatgc
      181 tttgttagca tgtgaatgat ggaatgcaga acatctacac acccttattc cagtaatgga
      241 gaaagttcat tggcttaatt cttctgtact tcgtagccat agctccactg tgtgttcagt
      301 atgtctggtc tcttttcact ataaccaaca gaagcaccat acaaaagtct tacaatggat
      361 gtcttaatct ctctgtgtgc ttttagagca ttattttgaa ttccatcatg caggcttt
//
LOCUS       KCPA01000986             665 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 108171tic ultra-conserved element locus
            uce-2903, sequence.
ACCESSION   KCPA01000986
VERSION     KCPA01000986.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 665)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 665)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..665
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="108171tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>665
                     /note="ultra-conserved element locus uce-2903"
BASE COUNT          193 a          129 c          133 g          210 t
ORIGIN      
        1 ggctacatat ctcttctaaa atcacctatg cagtgcaggt gcagcagttg tctgcaaaca
       61 gccagttgtc ttgcagacaa ttgtctcact gtgtgacatg ccctaaattt tgaaacttct
      121 tattttcaga ctgcaatgtc agacttccta ggtgacttcc cccttccccc tcctttaatc
      181 taggataagt gtttctgact tataattatt aaagagggtg gtaaaactgc acatattgaa
      241 gaacagattc tgtagtagta gtagtagctg gcagaaatgt taagtgcttt tcacagtcaa
      301 cattcaaaca gattatcaga tggcatattt caccctgttg ttactttaaa tgaagtgacc
      361 atgaaatcaa caaatctgct gtcaggtgcc tgtcacagag atagttctcc ctgtcacaca
      421 atgcctcaca taacaggtaa tgtgttttta agaatcagtc ctgtgtcacc tcatcaagtc
      481 cttgttaaaa gatgaaataa gacggatggt gttgtctccc acggagctga ctgaaattca
      541 gtaaaagcaa tgcatgtgta aaataggcag taagatgcct tttgtcttga gaattttttc
      601 ttgctgcctt tctagactga aagggttaag tttgaatttt gtgatgagga cagaaagagt
      661 tattc
//
LOCUS       KCPA01000987             861 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 108281tic ultra-conserved element locus
            uce-1613, sequence.
ACCESSION   KCPA01000987
VERSION     KCPA01000987.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 861)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 861)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..861
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="108281tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>861
                     /note="ultra-conserved element locus uce-1613"
BASE COUNT          302 a          152 c          178 g          229 t
ORIGIN      
        1 gtctgacagc agggtttgga ggaggagagg caaacctgga gcaaggcaag gaacacgcac
       61 gggatgtgtg gaaagaggaa acaaagagac agcgacgagg tgaaatcctt tgatatttcc
      121 tcagcttaaa gaggtaattc aatgcattaa aatggatcct tgaaatttca aaggatgaaa
      181 ctcgcacaac aaagattgtc gagagtgcta ttttctagga ttagaacaaa aacgtattgg
      241 gatttgctat atgatcttac attgccgagc aagactgtac acttgctgtt atgcaagcac
      301 catcttccaa tagagaattt tcataattat aacagaaagg cgtaaatttt ctaatgcatg
      361 gcagttcaaa aagtaatcaa gagaatgagc ctgagggcta ttttaatgta tgcaaagcta
      421 gtgacccaca gtaaatggga ggtaggcttc aatgaatgca aagtaatgca cacatactaa
      481 agacctggtc tgatgaggga cggctaaaat taacacccaa ttaatttccg aattgacaaa
      541 caaatgaaag ccataaatct actttctcat taattttctt gtggtataat ttaaagcagt
      601 aatatgaggg caaaaactga gcattatcca tcataaatat caaaaaagat agcactgtaa
      661 caccataaat tatgcatatt acctgttgtt aaaaatgatt aatgtattat caactttatc
      721 gtgcactgta tatgtctaga catacctaaa atctgaaatt tcatttagcg cttaggaaat
      781 aaagggtcca gaagaaatgg gattacccgc agcgcatcct tggctctgcc tcctgaggtt
      841 ctcacctcgg ctggactcat c
//
LOCUS       KCPA01000988             503 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 108390tic ultra-conserved element locus
            uce-6412, sequence.
ACCESSION   KCPA01000988
VERSION     KCPA01000988.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 503)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 503)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="108390tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>503
                     /note="ultra-conserved element locus uce-6412"
BASE COUNT          170 a           93 c           75 g          165 t
ORIGIN      
        1 attattattc atattttttc ctcaaagtga tcacattcgg atgattacac cacatttggc
       61 caacactcta ccatctagaa gagccttcct cctttgtata ttcagaacaa gtttcatgag
      121 aagtatctca gaaacatctg ccttcattat aattatattt ctatttcagc tgcaccaagc
      181 tatttacaga tgagcctgtt cataaagagc tttataatta agcaaacaga aatatctttt
      241 tataggatgc agatttaggg gtgataatca cacacaaaat acacagcaac agttgcaaat
      301 agagtgttta atgctagtta tatagtaagt gatgtgctca ataaagcctg acatgtcttt
      361 gttcctaaat gtaagaaaat atggtcttta ctaaacaact atgtaaactg cctttttcat
      421 aaaaaggcca tatatttcag ggggtatgtc ttgaaaatca tcatgaaaac aagccctcat
      481 gtctccaatg caatatgatt ttc
//
LOCUS       KCPA01000989             635 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 108502tic ultra-conserved element locus
            uce-7425, sequence.
ACCESSION   KCPA01000989
VERSION     KCPA01000989.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 635)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 635)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..635
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="108502tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>635
                     /note="ultra-conserved element locus uce-7425"
BASE COUNT          189 a          135 c          113 g          198 t
ORIGIN      
        1 ccatgcttac atttagctgt ggaggaacct accgttaaaa ggggaatttg actgcttagc
       61 cctctctgga tgagatgtat ggaaaacagt ccattaaaat attggttgtt gcaggcagac
      121 tgctacagat ttgcttttgc aaagcaactt ttcttccata aaatcattct cttttcttaa
      181 gctacagaag cagcataaag gttgaaattt tccattatga ttgttacctg ggaagtagca
      241 ctggttctag actctgggct gccactgatg tctaaatttt cttacagtgt acacacgaat
      301 acctgaaaca cacacgcgca cagtcaatta ctacatcact ttggtaacac atatttcaac
      361 agctgcacgt atcctacctt tgcagtggcc ctggctcgga attcggggca gccattaaca
      421 gttatggttt catgcatgta ttgatacacc taaaatgttc atgaaaacaa aatgaaatta
      481 attataggag caaaactata ttaacctccc tttccctcat caataacttt agttaatact
      541 gtcaatcacg tagtcaagtg tactcgagca tgcttaggtt aacagagtgg atcaatctgt
      601 gtttctcatg ataatttcca aactttacat cttcc
//
LOCUS       KCPA01000990             897 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 108614tic ultra-conserved element locus
            uce-711, sequence.
ACCESSION   KCPA01000990
VERSION     KCPA01000990.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 897)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 897)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..897
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="108614tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>897
                     /note="ultra-conserved element locus uce-711"
BASE COUNT          296 a          136 c          200 g          265 t
ORIGIN      
        1 aaaacgtgag ttaggtgtta taaaacaact ggtgggtgct tgtgtgcatg tgaaatttgc
       61 ttacacgagt aatcccattg atttaaatga gagcattcaa gtgatgaaaa caggttcaat
      121 gtgagaatgt ttagaagatg gtgaccttag aaacgaacag gcatctttgg aagtattcaa
      181 agggggttat taaaacttaa agctgagagt tggcgtttga aggcagaagc agctaggaag
      241 gtgttcgggg agctcacctg cctgataata atgttgatga tgctggttaa ctctgcatca
      301 actttctcgt acttatgggg gaagggatga gggcgagaga gggacggtga cagcaaggct
      361 gtttgttttt cccgaaagtt gtttgtgatt tcaggtactc atgggaaatc tcttgatcag
      421 attcacatct gttcctgtca aagtgggtgc taagataccg gtcacccagc aaccatgtcc
      481 aagagggaat tgggccgata ataacttcaa aaaggaatga cagatgctag attaggatga
      541 aagacaaaac gcatgaaaaa tgagcttgtt agaataaaaa aattgttcaa gcaccttcat
      601 gcaaattaaa tgaatattga acatttgcat gcagtaattt ctactttttc tgttgattga
      661 gaagaaataa agacggtaca tataaaaaca taaatgtaat tttttttttt gcaccaatta
      721 acatacaaag cagtatcttt cttctaaaaa tgagattagc cacctgggtg cttggctgta
      781 tcccacatat gtcacaacat ttttgtaatg tgtatgcttc tgttgaagaa acaccttatc
      841 taattctttg tagcaaaaca aacaaggaag aaaccttata ttaattttaa aatactt
//
LOCUS       KCPA01000991             390 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 108721tic ultra-conserved element locus
            uce-1900, sequence.
ACCESSION   KCPA01000991
VERSION     KCPA01000991.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 390)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 390)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="108721tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>390
                     /note="ultra-conserved element locus uce-1900"
BASE COUNT          148 a           67 c           76 g           99 t
ORIGIN      
        1 gagcagggca gggagctcag gggaagcagc cacacaacca cgttctatac aagccattta
       61 tttgaaatgc cgactaagga taaagtcagt gttacatgct tctcagcaac agtagaaaaa
      121 tagaaccagt gaaaaccttt ttacaactgt aatggtactc aaaagagaaa tgtattgttt
      181 tacaatgcat cacacaagac tagaattcaa gtttggaggt acctaaataa aaatactaaa
      241 aaaacactat gtacaattga agcgtaaaca agttttacaa agtactggtt atgcaggttg
      301 tagaaaaaac acttgcatag gacatgaagt cagtttaaga aagttttctg agcctttagc
      361 attgaaggca cttgacttta taccagtaac
//
LOCUS       KCPA01000992             528 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 108829tic ultra-conserved element locus
            uce-3505, sequence.
ACCESSION   KCPA01000992
VERSION     KCPA01000992.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 528)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 528)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="108829tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>528
                     /note="ultra-conserved element locus uce-3505"
BASE COUNT          171 a           97 c          117 g          143 t
ORIGIN      
        1 aagaaagcag tgcaaccaac actgcttggg gaagtacaat ttattcagat tcttctggga
       61 gtagggagga attcgaacac atgtaacgaa acgtggtcag tttgatctgt taaactaaaa
      121 tggcagacca gcttaagtcg acactgagct ctgacaatca agcccaggga accagtgaag
      181 gaacttgtat gaacttacag cgcaaaccgt cagcagactg ggaagagttt tgagggttac
      241 ggtaaatgtt caagagggca atggtctgaa atacaaaacg caacaacttt atattatgga
      301 aaataatttt aacaagaaac tggtttcctt tagggtcgct ttagccgagt ctgtgctgaa
      361 agagaggtgg ttattctctc ccaagcagga gaacttctgg tgacctttct atatcaacct
      421 aacactgtaa agtaatagag atctcatgat attattgtac tcttaatttc actccattca
      481 ccaatattac tatagagggg ttttgcatga tttcagacag ctctgaaa
//
LOCUS       KCPA01000993             394 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 108936tic ultra-conserved element locus
            uce-2846, sequence.
ACCESSION   KCPA01000993
VERSION     KCPA01000993.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 394)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 394)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..394
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="108936tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>394
                     /note="ultra-conserved element locus uce-2846"
BASE COUNT          129 a           75 c           73 g          117 t
ORIGIN      
        1 aaagcattac tcaacagcct gttctgtaat ttaacagata tttcaagtgt ctctcagtta
       61 cgtaaagaaa gtattcagtc aactacaatc aaagttaaaa caaaaaagtg cctgtgatcg
      121 aaggatcatt attccagacc tgttgtgaat cagtgaaaag gagagtagca aaggacatac
      181 cttggaactg ctcccaaaac aatcaagttg gctttttgtt tgttgtttcc aattacagca
      241 tttttcatat ctctgtaaat ccagaaagaa aaacaaaccc tggtaaattg tgctgaggta
      301 ctgagggctt atctatagaa tttactattt ccatgattat caagcagttt tccacatgtc
      361 catgctgcag ctacagactg ggcagtgctt cagg
//
LOCUS       KCPA01000994             628 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 109046tic ultra-conserved element locus
            uce-2540, sequence.
ACCESSION   KCPA01000994
VERSION     KCPA01000994.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 628)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 628)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="109046tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>628
                     /note="ultra-conserved element locus uce-2540"
BASE COUNT          173 a          152 c          138 g          165 t
ORIGIN      
        1 cagctagaag ctagatcgtg ctgccttttc ttccttcaac ccttggtgcc acaggtacga
       61 ctctaagtgc cccctgttaa ttgtcatcct gtttctgcct gtggctccaa aacgcactct
      121 ccacaagagg aaaggaccgt gtctgttcct tgtcaattcg catcagttta aggtcaggaa
      181 agctaacggg gaacaaggca ctgcagcatt tgaactcaac cttgccttcc cgaggaacaa
      241 actgacaatt agcacaggga tcagcatcaa aaaagagcaa cccagcgtga agcctgtcta
      301 attagtcata tgaactgagg gcttcccctc cacttcctca ggaacacatg cctgtcagat
      361 ctgatacaaa gagacttctc tccctgacat agtactgaaa ttaggttggg aacaggtagc
      421 cctgcttgtt taagcaacag gaggcttagc gacctgcaca gttgcagcgt gcttatgacc
      481 atgtgcgatt gcaggatgtt tctttccttg cgttgatcat gttgctaatc ttctcgattt
      541 aataacactt cttgtttaga tggaaaaacg agcaagggga aaaattagag atgaaagctg
      601 aatgacagtc tcctaatctc agagaatt
//
LOCUS       KCPA01000995             700 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 109157tic ultra-conserved element locus
            uce-6342, sequence.
ACCESSION   KCPA01000995
VERSION     KCPA01000995.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 700)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 700)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..700
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="109157tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>700
                     /note="ultra-conserved element locus uce-6342"
BASE COUNT          213 a          134 c          137 g          216 t
ORIGIN      
        1 tttggcggct tctacttttg ttatttgcta ccaattcctc tgcacccagt aatgtcaagt
       61 ggtcaacaat taaattaatt cagaatacac catgaacgta agagtgaccc tatattatat
      121 cttcattttt tctccttcat catcccttta tttgactgca tttcagtaaa ttatccatgt
      181 agtttttatt ttgacagctc tctttacagc agtaaaacaa aatgtgtgca ttgcaaatgg
      241 caaagattca aatttcagct atgtttatcc aaaatagcac tgaactgctt ctgtacttat
      301 gctatactgc ctacagcctt acggaagggg agacagatgg gatgaattta gcagggaaac
      361 agctgtggct tgaagaagag acaagcaaaa gttttgctat caggcttcat tatgtatcaa
      421 ggtaccagta aaatgtgtat ccgtaaggca gccaaaaaag tgtttttcat ttgactagtg
      481 ataattacct tttctcaaca gctgacaatg ttctaagcac cattaaatag gtaaaataat
      541 taagcaataa gataagacag gcagtgcctt gctggggatt attgctcgct tcgggtgtgt
      601 tgcgaggcac aaggctgaag ggtgagtgac ttcagccacc cgagaaatgt aataatccct
      661 cagaaatgca ctgcctggag tgtcttcttg ccattaaaaa
//
LOCUS       KCPA01000996             675 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 109269tic ultra-conserved element locus
            uce-3134, sequence.
ACCESSION   KCPA01000996
VERSION     KCPA01000996.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 675)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 675)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..675
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="109269tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>675
                     /note="ultra-conserved element locus uce-3134"
BASE COUNT          234 a          136 c          114 g          191 t
ORIGIN      
        1 aagccctcat ttgataggtc tgtatgtact cttcaattat gcatgcatac attaagcact
       61 aaatgaaaac aaaaggcatt taacgttaat tactctggaa agtcaccata ttgtgatcac
      121 acacagcacc actactgctg cccagctaga tatcccactt tcgtgcaaac aacagaacca
      181 aattgaatta cataaaaaga agctacatac tgactcccag cagtatgttt tgacaaaaca
      241 ctttgtctgc ttaaatgatt tcagaagctg tagtcaaaag ccttgactgc aaataatggg
      301 ttcataaaac ctatctttaa aattttacct gacagtaatg ctgtgcaaat atctgcactt
      361 ctagttcacc ttctccactt gtttacatca ggattttaat agagtggctg tcacagaaca
      421 acagctaaag gccactgttt gataagttac tgtaaaaata gactgcttaa aatgagaatt
      481 tcctcctaaa ttcagtcatc acaaaaaggt ggtgggtggg aaaacattga agggagacaa
      541 tttctaggag gactgcaata aagccttttc aagttcagtg acattctaac ctgcaatgac
      601 tttgtaagaa actacatttc ccatctgtct tcagttttac tgcgaaatga caaaaataac
      661 aggaggaaaa gtcag
//
LOCUS       KCPA01000997             648 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 109380tic ultra-conserved element locus
            uce-1766, sequence.
ACCESSION   KCPA01000997
VERSION     KCPA01000997.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 648)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 648)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..648
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="109380tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>648
                     /note="ultra-conserved element locus uce-1766"
BASE COUNT          219 a          148 c          135 g          146 t
ORIGIN      
        1 cagctcatat cagcataaac acttcatcac agctgacacg ctgatatgct aaatgagtaa
       61 gtgcggtgca caaagaggtc acagggaagt taactaaagg gattataagg gacagtcaac
      121 acacttcaaa aagaaaaaac ctgataggtg cagaaaacat ggtaaatgag ccctaagaat
      181 gcaaaccctc cgccgtgcac tccattacag ccctgacagt ccagttccaa acagttaaat
      241 atgaaactgt caacaagggc ctgtcttaat aaccaaactt gaggcctttt atcctggaag
      301 atttatgaag taattttaaa gaggcccaag caaacatctg tcaataaatt gaatgccggc
      361 tacaggattt acaagcaaga caagaatttc tcattaagtg cacattagca ctgtggggat
      421 cataaatagt aagagggcag gatgctgagc ctctcaagct gtcattaaaa cactatctaa
      481 gaactaatga ggaagtgatg gaaggatact aatgatccct ccagctcctt tcattcagca
      541 gtgcctgtgg tacatttgcc acaactaggg tttcagagac tcccaacctc tgtccctaca
      601 aacccacagg gaccctgagt gctcactgcg ggaccagcaa tggcattg
//
LOCUS       KCPA01000998             524 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 109489tic ultra-conserved element locus
            uce-6626, sequence.
ACCESSION   KCPA01000998
VERSION     KCPA01000998.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 524)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 524)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="109489tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>524
                     /note="ultra-conserved element locus uce-6626"
BASE COUNT          169 a          101 c          105 g          149 t
ORIGIN      
        1 aagattaaat tagccttgta acctctttct cttccagact gatgatggaa aataaaagct
       61 cttagccaca gaatgtaaca cttagaatta atatttaatt agaccagcaa attgtacacc
      121 gtggctgaaa gcttccaaag agttgttagt gccacaattg acctacaagt ttaataataa
      181 ctcacttcta ggagcaagtg ccagttcagc atagtggagc cactgtaaga aagtcctgtg
      241 agattaaaat cagcaaacca aatggcaggc gaggattcct gggatggagc cttctggaaa
      301 gctgggagct ggagtagctt ttcagccagg attcagatga gaacagtggg caaaaaaagc
      361 tgatccctcc tgctctggga gcttctggtt gtaggccaaa atcttagaac agattttttc
      421 taaatgttct tacagcagct attaatttat ctcacaaatc aagtaacgaa tggctcgtct
      481 tcatctttta attaagtttt aatacaaaca ttgtcactga attc
//
LOCUS       KCPA01000999             756 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 109601tic ultra-conserved element locus
            uce-5451, sequence.
ACCESSION   KCPA01000999
VERSION     KCPA01000999.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 756)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 756)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..756
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="109601tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>756
                     /note="ultra-conserved element locus uce-5451"
BASE COUNT          232 a          152 c          150 g          222 t
ORIGIN      
        1 tactctctga gggcttatct acagtgtggt tgctgagaaa taatgaattt acagcacctc
       61 agctccacag gtgggcactc ttaacatgca gtaggagaag gtgctccatg tgaaaaatag
      121 agagaaaata ttccctgtga ggattttgag gctgagtgca gttttccttt tgctctacag
      181 gaagcttcag ccacactgta aaaaataaca acccacaaaa gtctgtctgg ggggtgttgc
      241 tggttgtcac catggcatag atggcctcac caactgcagt gacggagcca cccatggtaa
      301 atgctggaca actcttctga cctgttaata gctggcagac tatttgatga cagttgcaag
      361 aatctgatgc acagcagtat cctttacagc agtttaatct ttgtcatcaa atcccccagc
      421 agccatgatt aatagcagca cttgagcttg ttttgaaagt tgtatatttg gcagctatga
      481 actttgatct atggtttcgc tttaaagaat cattatgaca caaacttttc ctataatcct
      541 tccatctaat taaaccacac acaaatacta tgcagggaaa tatgatgcta ttgatataag
      601 ctgtgtgttt attacattat tttaggcact ttattaaagt ggatagttgt tcccagcaag
      661 atagtagata agctccccaa aaacaataac atcacccaga aagaatatat aagagaattt
      721 cccaaggcca aattcgatta gaaactttct ttgttg
//
LOCUS       KCPA01001000             443 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 109708tic ultra-conserved element locus
            uce-3084, sequence.
ACCESSION   KCPA01001000
VERSION     KCPA01001000.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 443)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 443)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="109708tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>443
                     /note="ultra-conserved element locus uce-3084"
BASE COUNT          136 a           77 c          110 g          120 t
ORIGIN      
        1 ttttttgagt caaaggaggt gtaattggta gaaagcacag gagctctgtc agtaggtgat
       61 gggaagcgac ggcaggctcc aggaccggcg ccggagcaga tgttctctac ctgcctcgtt
      121 actaatttca acaagtgttc gccttctagc tgctgccagc aatggcatgg tttgttacca
      181 tgagcaattt tcttaattaa cagacattaa ttagccattt agcaattttg caagcatttg
      241 tttagcagct ttcctaaaca tgaataccac tgtgataatg gtactgatta gagggtcccc
      301 taattaacag tacagggaag gaaaattgaa atcacataaa ttaaaaaggg aggggaagtt
      361 aatgaaggca ggacatattt gcacctgcaa atcttttgta cagcggaaac ttgagtgcaa
      421 tgtaaataaa gtaagagggt ggg
//
LOCUS       KCPA01001001             646 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 109813tic ultra-conserved element locus
            uce-7690, sequence.
ACCESSION   KCPA01001001
VERSION     KCPA01001001.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 646)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 646)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..646
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="109813tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>646
                     /note="ultra-conserved element locus uce-7690"
BASE COUNT          219 a          114 c          108 g          205 t
ORIGIN      
        1 acgtctcaac ccatttaaaa agcacagcag tttttaggag gaatacttgg gaataactac
       61 aaatagtaag tttccctagt tctttttgtt agttaagaca acagaaacta ccattccaaa
      121 tgtgatagtc atatctgtat ttcatttata aactcaacta cgttacagct atgttcatat
      181 ctttccagag taaattatgg gaaataacca tttgtcttca ttgtagacac ttttgcatgt
      241 atagtagaaa acaaacctct attcaataac tgcacagagg caccattaaa atcaaattta
      301 cagtaaacag aacctgcagc tggggtaaaa cactaactgt tagtatttta attatcagcg
      361 aagctttcgg aggtctaaca tctgctcata gccaaatgac agcagctgct tgtgtacact
      421 taaaacaaca tgaatttctt ctataaatat taaaatgaat tgtatgtcat gtgttcattg
      481 cagctatatt cctatttgtt taagtatata gggtattttg aacttctttc ttgtggcaaa
      541 ttcataaagg gctgacctcc tcaaaagaat gagaggcaaa ggcagcaaaa attcttgagt
      601 ctgtaaattg aaaatgttta gagacagtac tggaggtcac cctctg
//
LOCUS       KCPA01001002             685 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 109924tic ultra-conserved element locus
            uce-2612, sequence.
ACCESSION   KCPA01001002
VERSION     KCPA01001002.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 685)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 685)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="109924tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>685
                     /note="ultra-conserved element locus uce-2612"
BASE COUNT          195 a          135 c          165 g          190 t
ORIGIN      
        1 taaggtatgt tggcttttaa ataaactgtc aagtaaaagt tggcattgac aacaccaagt
       61 gagtaactgc ctttgtagaa gagctgagag ctcggctgtg tgtcagatag atagctgccc
      121 cagactgagc tgggaaggct cacgcatcct gcttggaagg gttgcttgcc tgtggattta
      181 cggctgcgca gtgctttggg gtgatctgaa tgctggttaa ctggctactg gcagttcatg
      241 ctctgcaact gctggttctg gaattagaaa gtttggaggt gcaaaaacat aattggaaaa
      301 ctccctgttt aaaaggctaa ttgatttcac aggtgtttaa ttatcatttg ctgtgagata
      361 ataccttgta gtaccataaa aaatggattt aattttcgag tgcttgcaaa accattgcca
      421 aagccaagtt agagcgaaag ctagataatt attctataaa tcaaacacac tgcctccttt
      481 aatacttggc tataatgaca tctgacgacc ttgaaactaa cataaaaagg tttgccaaat
      541 gctgaaaggt ggagtatttc ttacagtcta gttcgttact gcagctgttg ccaccacact
      601 gcgctggctg ctggactcca agggatgttc cacaggagca ggcatgaaca gcgacttcgg
      661 aacactggta catgagcacg agccc
//
LOCUS       KCPA01001003             602 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 110034tic ultra-conserved element locus
            uce-1072, sequence.
ACCESSION   KCPA01001003
VERSION     KCPA01001003.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 602)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 602)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..602
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="110034tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>602
                     /note="ultra-conserved element locus uce-1072"
BASE COUNT          211 a          136 c           98 g          157 t
ORIGIN      
        1 aacttcccag acaaaacgca acccaagcca attaagacac aagtgtttaa agacatgagt
       61 agtaattaca aatgtattat tcatacctaa tttacaagat gaacttcttt cagtaaaata
      121 ttaaactgtt tacatgcatt caggaagaca atttcccagc cctgtgcgtc ctgctctgga
      181 gcggtgacta ttgctatgca acaactccac agacttacag tgtacactat ggagtaatca
      241 gaaaatgttt gacctcagat atctacttga ccccacagaa atgcaggctc gctcgctata
      301 aaatcctaaa caatggggca gacaaggtca gagggtcaaa gcaagtatta acaggtcatt
      361 gtgcaaccca cttgggagca attacttctg gtcacggcta agtggacact tgattgaata
      421 ccactaagac agctcacatc ccacagataa caatcctcac agcgattaag aattaaagcc
      481 cccatgattc agcctttatt actcaaatga acctaactat tccataaaaa actcttggta
      541 tatgcatgat gcaaggtcta aattgaaatg ccacctcatt aaacaataat atctaatttt
      601 at
//
LOCUS       KCPA01001004             750 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 110145tic ultra-conserved element locus
            uce-4885, sequence.
ACCESSION   KCPA01001004
VERSION     KCPA01001004.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 750)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 750)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..750
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="110145tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>750
                     /note="ultra-conserved element locus uce-4885"
BASE COUNT          220 a          140 c          150 g          240 t
ORIGIN      
        1 atagcttggc taaggtagac agagcaaaat acagagaata gttgctccag ggctttgaaa
       61 cccctcaagg caaggatcag gatacaatta gctcatgtct ctacctccag tctgaatcaa
      121 tctccgaaat aaaagttaaa ttaaattaac tgatcacacg ggcataaaat tgatctcctt
      181 cgaaacgtgc atatagaaag tatatatata gcgttttttt ttgtggaaaa aacagtctca
      241 ttccagccta caacttgctt tttactctcc tcttgcacag aaaagctgat tttaatcgtt
      301 gtgattagtt ttgatgtaac gtttccgcgg gcgatttctg caaatggatg gagtgtttct
      361 ttgccagaag agggaaaagc agcagatgat gataattata aggattgttg gttgtttctt
      421 tcttttcttt ttatttgtat ttagatctgt ctcttcactt tcccgagttg acctgacatt
      481 gccattgtac taaggtcgca caacttgttg attaggatca cctcccgttt tgattaaggg
      541 atatgggata atttggcagt ggagcaacac attttctgtt cccttggcta tataacttcc
      601 caaatgacgt gtataaaaat aagcacatgg agtctgcttt gccccagtcg agtctgaatc
      661 aatgcctggg ggtgatacac aaactcattt caaatgttca accatgcaga attgcaaaaa
      721 gattgaagga gttgcactgc atttttaaaa
//
LOCUS       KCPA01001005             643 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 110257tic ultra-conserved element locus
            uce-7460, sequence.
ACCESSION   KCPA01001005
VERSION     KCPA01001005.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 643)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 643)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..643
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="110257tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>643
                     /note="ultra-conserved element locus uce-7460"
BASE COUNT          192 a          130 c          128 g          193 t
ORIGIN      
        1 agttatgaga aggcaaatac tacccatcac ccacaccaac tccagcttcc cactccccca
       61 catcacaagc tttttgtact acatgaaagc tagtctcaaa atttcatgtt catagttaca
      121 gattaaataa tattaaacag cattacactg gaaagatttg tttccaagta gcaaacagat
      181 tccccatatt attctttact gtaagtagtt gttgttatat cttattcatc tggaaaataa
      241 tttcaaacag ccatgaaaat agcggatttc tctctgttaa aatgatagtc agagcctggg
      301 ctgctgacat atagtaacat gattcacttg gacagttact gactgcacat ccaattcatt
      361 tcttctgtag agcaccaagt tattatctga aatgcacaag gtgtctgggg gtaacatatg
      421 atcagccagg gacgcttttg acggcttgaa gagcaatcaa taaaaattgt ctccagcagt
      481 tttgtagagt atggaagttg gtggtgaaat gaagtgatgg agattaactg gtggaagtca
      541 atgccccggt gctgtgaacc ctgtttttta attaaagatc cgaagctgct tttcactgga
      601 atggggtgtt gtaccagatc ctgtgctgag ggacccttct ccc
//
LOCUS       KCPA01001006             462 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 110365tic ultra-conserved element locus
            uce-2992, sequence.
ACCESSION   KCPA01001006
VERSION     KCPA01001006.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 462)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 462)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="110365tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>462
                     /note="ultra-conserved element locus uce-2992"
BASE COUNT          156 a           75 c           86 g          145 t
ORIGIN      
        1 tttttatact aagttacagt tatcttttca gcccagtaat acgaatttac aggaatcttt
       61 ggcttgcttt atcttactgt aacatcaaat tggctggtga aatgatactg gcagtataag
      121 tcattacagg tctgacgtta cagttgttac acattgctga atctgtcaaa tgaaaaggga
      181 gcacaaaggg aatttccaaa tgcagctgct atttcccatt tgttaaatcc ttttattaca
      241 ccatataagt acacagctgg gaaatactat agagtgggag ttaaaacaaa atattttggc
      301 ttccagacat tcagaataca caaaggactc agtggaaagc aatgcctgat atcaaaaggg
      361 agtgaaagtt tgaaaacatt tctagccagt gtttttctga taatgaacaa tgtagtttaa
      421 aggtatctta cattacagaa agtgctgcat accataaatg tt
//
LOCUS       KCPA01001007             580 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 110476tic ultra-conserved element locus
            uce-6157, sequence.
ACCESSION   KCPA01001007
VERSION     KCPA01001007.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 580)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 580)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="110476tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>580
                     /note="ultra-conserved element locus uce-6157"
BASE COUNT          163 a          123 c          106 g          188 t
ORIGIN      
        1 ttgtcccaca ggacttaaat ggtcccaaac ttctcctggc ttatgccatt acaaccttaa
       61 tgttgtcagc ccggaatgct gtgggagtgg gaaggctgcc ctttgaacaa ttcccgttta
      121 taacaagtgg ctcatatcaa cgcagctcag atctcaacca gctcacgcaa gggttaaaaa
      181 tagaaagtgc tatccactgg tttgttctga tgttcctgta gatattgtca ctggatgtat
      241 cctcagaaga attctattca acacctctgt ctttaagtac aaagctgtag gctgtagcag
      301 ctttaggaaa cataagtatc cttttttctg ctgcacagta tctgtgtgtg aaattctcta
      361 aaggggttta agtatttacc ctgaacacta tcagacagtt tctaaaattt tccttatcct
      421 gttgcagaaa cacttcaaag agaatcataa acacagtctt ttgtgctttc agcacacatg
      481 ttgttttgga agcttaagtc tgaattccct cagaattgta aatacctcaa agatgtgcaa
      541 tacgatttta cttttacagt ttcattgtga ttctactaca
//
LOCUS       KCPA01001008             491 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 110584tic ultra-conserved element locus
            uce-6509, sequence.
ACCESSION   KCPA01001008
VERSION     KCPA01001008.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 491)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 491)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="110584tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>491
                     /note="ultra-conserved element locus uce-6509"
BASE COUNT          159 a           84 c           93 g          155 t
ORIGIN      
        1 ttaaatcact tcagcagtat tggttagtta acatatttta tgactgagcc atattaatga
       61 gcattaaaac cagcccaatg tgttagattt actaggtttt tttgttactg tgaatatgaa
      121 tattctgatg aaacttgtgt agctgttgct ttctgttgct ctctgttact cagtattttc
      181 agagcttggg aacagatggt gcaccacctg attctgcaca ctctaatgta agattcattg
      241 tgcttcacag gaaatcaaag atcaagcaac attgcagaag gtgaagcagc acctcagcaa
      301 ccagaaacac agtatgatat agtcaagtgg tagaacaaga aagccaaaag agagaaggaa
      361 gagagacata ttcttgaggt ttatttttct ttctcctatt attttctcag tctcaagtct
      421 ggaaaaggat catgtgattc cgaatgagaa actttaatac ttttatacta aagttcaaac
      481 ctgcaaagca a
//
LOCUS       KCPA01001009             329 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 110685tic ultra-conserved element locus
            uce-6522, sequence.
ACCESSION   KCPA01001009
VERSION     KCPA01001009.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 329)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 329)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="110685tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>329
                     /note="ultra-conserved element locus uce-6522"
BASE COUNT          105 a           60 c           45 g          119 t
ORIGIN      
        1 tttataaaag catgctgtct ttcaattaac atagtaatga cctattgtca cctgttacca
       61 tgctaatcct gagctggtgt gaaattactt tataataaac actatgcagt tctgactttc
      121 aattaatttt tcccatgctg tgctaaatca gattaactgt accccaccct tttgaccaca
      181 gacataattc cttccttata ataaaataga ggattaattt atatgaagca tatctataca
      241 catttgcaaa taaatgtaaa gatagacttt gtaccatgtt tgcactgctt acagtgtcag
      301 gttgaatacg gatttaattt ttatgttca
//
LOCUS       KCPA01001010             816 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 110796tic ultra-conserved element locus
            uce-5822, sequence.
ACCESSION   KCPA01001010
VERSION     KCPA01001010.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 816)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 816)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..816
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="110796tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>816
                     /note="ultra-conserved element locus uce-5822"
BASE COUNT          268 a          165 c          148 g          235 t
ORIGIN      
        1 atgattaagc gtaaatctgt cctttaaata tgcatagcag taatagctta aatgcagttc
       61 aaatcatggc cagtcttgct gcatatacaa atctgcacca ggcagtgcta aattaaaaag
      121 cacctcaaaa gacaaagaaa aaattggttg taaactcctc tgcattgcaa agatctcttt
      181 tgtctgtcaa tcaacagaaa agtattattc caccatcaca aaaggcaaac ctttggaggc
      241 agtataggtc tgtgtgttgt gcaaatgtgc agttgctaag aagcaaatat gcttctcctc
      301 taatcaaata gcccagctca gcaatgctgc tggcttgggg caagaagcaa attccaccag
      361 ccacaaactt agaaacagtc ttgaattatt tgttgctgac cgctggctga accctgtcct
      421 gatgagcacc atcaccatta gccacttctc agtgtattcc atcaaccaat ggcaatagca
      481 gcatgctaca gctcaggctg caaggaattg atcaaacagg gtaatgagac tatttcttca
      541 tggaggttat tttaaatgaa tataaatatt ttctttctac ataatttgcc acaaaaggtc
      601 actgaactcc ctgcgattct aaagaaaaat gctgtggtat cccctttata tatttgagtt
      661 aggatatagc caacaaacaa ttctgggcat ttttgatgat cgtgtaaatc ttaatgaggt
      721 ggcatcccag acaattgatt agcagcgacg ttctatcttc acatttactt acgaacaaaa
      781 agaagatttg atgctatttt agaaaatcat gatata
//
LOCUS       KCPA01001011             498 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 110907tic ultra-conserved element locus
            uce-5123, sequence.
ACCESSION   KCPA01001011
VERSION     KCPA01001011.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 498)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 498)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="110907tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>498
                     /note="ultra-conserved element locus uce-5123"
BASE COUNT          128 a           95 c          109 g          166 t
ORIGIN      
        1 ttttctcctg agcaaaattt actgagcctg tgttaattta gaatggttag taggcatgaa
       61 aacctcctca gttcctaaaa tgagcatgag tcatgtcttc cttgaacaag tagctgtgca
      121 ttaaatatgc tggcacatct tctgcttgag caagtggacc gaaatggtgt gaattgttaa
      181 tgccttgctg ctttggttca cggcttgtga ttgatcattt gtaactatat ctactccttg
      241 ttccatgaaa tcaagtatgg agtaatgggt tcatcagatt tttgggttaa attgagagtg
      301 aagaggtact gtgtgtggaa ataagagttg ccatgttcgg ggctggcctt gtaacagcat
      361 ggaatctaaa ggcgatattc aaaaccactt cactcatcat acgcttgctg attctgaata
      421 gggtccattt gcaggggaca tttggtagtt ttccaataca ctttatgcct ctttcttcac
      481 ttctaccacc ctgcacat
//
LOCUS       KCPA01001012             653 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 111016tic ultra-conserved element locus
            uce-7479, sequence.
ACCESSION   KCPA01001012
VERSION     KCPA01001012.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 653)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 653)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..653
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="111016tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>653
                     /note="ultra-conserved element locus uce-7479"
BASE COUNT          228 a          116 c          121 g          188 t
ORIGIN      
        1 aacactggcc aatcagaaca aaccggagct gtgttattcc aataatattt cattaaacta
       61 gaagcaacag attaaatacc tttgcataca caggaaagca aaaaataata tggaaattaa
      121 aagaaatctg gttaaaaggt tgcacacctt ctaaattctg agtgcaatgc agtgcaatta
      181 tgctggaaaa gccactgctg ctactgtgca gttgttgcag gagagggtta cagtgacaaa
      241 cagcttccct gctacaaagg tggcaggaaa tctatcaaac tggacaataa aattgcaatt
      301 gagtttcttt ggctttttat agcagctgca tgtatcttga tgtgtagctc tgcaaaacct
      361 atccaattct gtaacactgg tcctttatgt actagttctt tatcatagaa tggtgttata
      421 aattagtggc acgaacacag agggttgtaa aataagcagt aacccaataa aattagagat
      481 gaaataggaa aaacccaaat tggttattct cttagcaatg ttaaggaaat atttttgttc
      541 cataattcct acattacttt gaaagcatgc tagaaatcaa aaacatctga gatgcactta
      601 gcatcgagca atttgaccac tgaattatgc ccactatgct atgtgtgaat ctc
//
LOCUS       KCPA01001013             468 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 111123tic ultra-conserved element locus
            uce-2646, sequence.
ACCESSION   KCPA01001013
VERSION     KCPA01001013.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 468)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 468)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="111123tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>468
                     /note="ultra-conserved element locus uce-2646"
BASE COUNT          152 a           88 c          104 g          124 t
ORIGIN      
        1 tggaaaatag cagggtgaca cccaccttgg ctgtagcaat gcaaataagg cctcattgaa
       61 ctggagtgca caaagcacaa ctgtatattc tgtacacgag acagttaaaa atttgaacat
      121 aaggtagcat ttcctttatc atatcccata aaaatagcaa tttgctaaag cccttgtagc
      181 acagtatgga aggtggtgta ttttactgat aatgtagaga tgacagatag tcctatacta
      241 ggaggtttca atggtgtctt gctgtatagc ataataaatt gtgaggagca gagacagagg
      301 acagtgtagg caggcactgc tccacctcca gtagccaaat aattcagccc cggctcagta
      361 attatgctgt gtgaaaatat gggattaatt agactggtac actaacacac tgtagtctca
      421 ttaaaggctg aacagcattt tcatagatac tgccacttga acagggct
//
LOCUS       KCPA01001014             686 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 111234tic ultra-conserved element locus
            uce-2003, sequence.
ACCESSION   KCPA01001014
VERSION     KCPA01001014.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 686)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 686)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..686
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="111234tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>686
                     /note="ultra-conserved element locus uce-2003"
BASE COUNT          226 a          113 c          123 g          224 t
ORIGIN      
        1 aaagcagcct tctttcacag cagatttcag ttttgctcag agagctgtgt agcatttgtt
       61 ttaactccct gcaaacttta ggtctctgat taaacaaagt aggagctgga tgatatcaat
      121 ttaatcagat cgttgaggac agccagcaag aataaatagt atgtgaaaag ccagatttcc
      181 aatgaaatta aatgaaaagt tataaggctg tggttttagg aacggcctct cttttgtggt
      241 ttttggttga gtgtgttttt ataagaacat tattgcttta agaaaaaaat ttaaaccctg
      301 agaaattact ctcagtctaa cgagttcttt tccactgact acagacatca ttaggggatg
      361 gctatagcct gaggctgtgc atgaactttt tcttctaact gtacacttta tgtataattt
      421 agctttcttg cctaaattat tcaagcaaat agtgagtgaa aataatggag ttcactgaaa
      481 ccttccacag tattaaaata aaacacgttg atttgaattt ttaagctttt taatcacgga
      541 tttcaaatgg aatacgcatg tcttcagctc ttctctgctt gtcccccaga agaaaggaaa
      601 cgaacttcag caaatacccc attaattaat aaatgttact tacgactact tgaagtagaa
      661 gtaatagtaa ttaatagata tagaaa
//
LOCUS       KCPA01001015             380 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 111341tic ultra-conserved element locus
            uce-5052, sequence.
ACCESSION   KCPA01001015
VERSION     KCPA01001015.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 380)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 380)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="111341tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>380
                     /note="ultra-conserved element locus uce-5052"
BASE COUNT          137 a           64 c           58 g          121 t
ORIGIN      
        1 tttacctgac actgccttct ctctgcaaca gaggagtgtt ttattgcatg ttaaaagaca
       61 agatatgtat tgaaagtagc aattttattt gagttaaaat tatttacaaa aacccaaaga
      121 catacttcat gaaactggta caaactattt ttcctgccgt tggcttttgc tccaaagatc
      181 acagctgaga aatactgtat aaaataaaaa taggattgga ttcagaaaag tactctactg
      241 ttctaatttc caattgagag tatttacaca aatatttaca atggaaaaaa tgttacttta
      301 aaactttaat ttgcaagttg acctcaagta ccctttaatg cagagttatt tgagggtcta
      361 acacacaaaa acgcactgca
//
LOCUS       KCPA01001016             459 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 111449tic ultra-conserved element locus
            uce-4473, sequence.
ACCESSION   KCPA01001016
VERSION     KCPA01001016.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 459)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 459)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="111449tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>459
                     /note="ultra-conserved element locus uce-4473"
BASE COUNT          150 a           69 c           61 g          179 t
ORIGIN      
        1 cctcccagtt taataaaatt aaagtaattt atgtcatatt gatatgtcga tatgtttttc
       61 aataaacttt ttcacagaga aaattctctt cactttaaaa attataatta tatgtcttcc
      121 tcccactttg aaaatggcac aaggtgctca tttgcagagc tctactgttc aaatcttcac
      181 tgagaataga aatgtcatga ctcagttaac aatgctttat tattcacatt gatctttttt
      241 tatagtgttc tttatctcaa aaacattgta aatcagatat cttcctccca ctcttttgtt
      301 catttgcaaa tttttattat tctagtttaa aaaagcaatg gagtgtcaag agtcagtgta
      361 tactgtttat gttctttttt gctttaaaat tacttttaac tataaaaagt aagatgtata
      421 gcaggagctg gatttaagga tgcttaaaaa agaattgaa
//
LOCUS       KCPA01001017             589 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 111558tic ultra-conserved element locus
            uce-4549, sequence.
ACCESSION   KCPA01001017
VERSION     KCPA01001017.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 589)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 589)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="111558tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>589
                     /note="ultra-conserved element locus uce-4549"
BASE COUNT          182 a          114 c          120 g          173 t
ORIGIN      
        1 aaaatacaag caaacaaccg acacattagt taagagacct tccattttac ttaggcagtt
       61 cacgataatg gaatttaatt gtggaaaaag ctgaataatt ttagctgaat gtcatttggt
      121 tcattcaaac tgggaatcag ggacattttt aacaaaggtt ttcaaacttc ttttgaaatc
      181 aggaagctgc tgtgcacaga taaggggaga ggtttgagga ttctctatca gaaatttcaa
      241 ggttttttcc atctgctttt tcacattaac tggtaattat ccagaaaggc acataatagt
      301 gcagaaatga cagaagctga caaaggtttt cctaagatat gtaaattgtc agtgataggc
      361 aaggtgcaac agaaaggctt tctacagcac aattatttat gccagtttca tttgctttta
      421 ggtagcactg atggttctac cccaccgctg cctttatcac aggcactgca cattccctca
      481 ccaccagcac acagggaagg tggcaaaaac tgagcttgga gcttggtggt ctcctccaat
      541 gtaaatacat gcacatgcgt gtggagatat gtttgttata accttcccc
//
LOCUS       KCPA01001018             625 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 111670tic ultra-conserved element locus
            uce-278, sequence.
ACCESSION   KCPA01001018
VERSION     KCPA01001018.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 625)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 625)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..625
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="111670tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>625
                     /note="ultra-conserved element locus uce-278"
BASE COUNT          188 a           98 c          118 g          221 t
ORIGIN      
        1 acactggtta tgtaagtgga cttagaaaat aggaggacag gggacgtcag ggaaatctgt
       61 ctgtaaatat gctacataac caaacttttc aaaatgaagc gctgccattc tgcaagtgaa
      121 ataaagcagt tgctgctgaa tgcatactga gagacaagtc ttataatgtt cttcatttgt
      181 tgaggtttct ttgcattaat taaaaaaaaa caaagtattt taatgtgacc ttcatttggc
      241 atttgtttta acttttcttc tattttattt aattcttcca cttctgttgt tcaattagtg
      301 tttgacccct ttagcagaga tttaaattaa atgacatttc aatgccatcc catatttaaa
      361 atactgtgtt agttgtggat cataaaggat gatcttcgtt ctttagctaa tttattcatt
      421 taacaatttc cctccagaag ttccagcaga aggctctgaa gcaaactaag cagaagaaat
      481 ccaagtcggc tgaatttctg atgggtgagc cttgcttgat gagttattgc tcataatttg
      541 tgtaaggatt aattaactaa ttacagacaa atggctgtgg gcgaaatttt gctcttgctt
      601 gtcagggtgc aatttgtaat tattt
//
LOCUS       KCPA01001019             845 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 111784tic ultra-conserved element locus
            uce-2503, sequence.
ACCESSION   KCPA01001019
VERSION     KCPA01001019.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 845)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 845)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..845
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="111784tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>845
                     /note="ultra-conserved element locus uce-2503"
BASE COUNT          243 a          150 c          161 g          291 t
ORIGIN      
        1 aacagtgtat ttgttttaag tgctttcttt tgtcatctcc atttcagggt tttgcagaga
       61 tttatcgtga gtagaatgaa aaggttgtgc aaggttcagt tgtagtaaga gcaacttgtt
      121 tgtatgcatt tcacatgctg ttggtctgta ggtattatta atatctattt ttagaatcaa
      181 gattgtgatg cacagagtac gtaggcacaa tgtgataaaa acacagcaat actgtttcct
      241 ttccatttca ttataaagtt tctttgaccc tgtggtttat tttcaaacat acaagttatt
      301 tgttctggtg tattcttaaa caggggttgt ttttctccct ttcagaaaat gagcacagat
      361 ggtgattgat ttttcaagtg ctgacatccc tgcttgagaa aatgttccca ccttctttgt
      421 gctgagcaag tcaggcaaac taacatgatg atgcgatcat cagtttcatg cagacatgca
      481 gaattgattg acagggaaaa ttttaacata aaccacacat tcttccagtg tcttcaattt
      541 tttaatgatg tttatttgca ggatattagc agcagcaggg atttcattta aaaacttatt
      601 tcagcaacaa ggttaaattg agaattttgc tgcactagcc cagcacatat cagtacaatt
      661 tgtaatagct cttctgagcc agttctgaag ctaaatgctg tcactggcta actagccatt
      721 ctcaggccat tgcttctgtt tgcgtgacta aatacataca attaaagcct agcactttca
      781 ttctctatga actcattgtt atccagggtt caagtactca gataatgggc cagaagaaaa
      841 caggc
//
LOCUS       KCPA01001020             488 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 111892tic ultra-conserved element locus
            uce-7499, sequence.
ACCESSION   KCPA01001020
VERSION     KCPA01001020.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 488)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 488)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..488
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="111892tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>488
                     /note="ultra-conserved element locus uce-7499"
BASE COUNT          157 a           98 c           89 g          144 t
ORIGIN      
        1 gagctggcat tccccacatg ttttagacaa ataatgcact tctgatcgaa agcaatggaa
       61 gctcctgcct tgtgggtatt atatttttaa tctaccaata agtttggttt acttttacag
      121 aaagtaattc caaactgtaa gccacgactg acctaactac ttattaaaaa tgctaatatg
      181 cttttgtgct ttgatgtctg gtgaacaata aaagggagag agttactctg ggacactgta
      241 atcctttatt tgtcactaag ttatgacacc cagcagagct atgtgacagt ccaaatcaat
      301 catcccccgt gcactgcagg ccttctctgc ctcctgcaga gtctatgcag tttaattagc
      361 tttttttcac actagcataa tgtacatctg cagcttcagc aagaaaaaga aatggaggat
      421 agttcactgg gatatggtgc cttaaaaaaa aaaaaaaaag tctgaaagaa gaaacatcac
      481 aatccttt
//
LOCUS       KCPA01001021             383 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 111994tic ultra-conserved element locus
            uce-3265, sequence.
ACCESSION   KCPA01001021
VERSION     KCPA01001021.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 383)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 383)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="111994tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>383
                     /note="ultra-conserved element locus uce-3265"
BASE COUNT          123 a           65 c           63 g          132 t
ORIGIN      
        1 taattaatcc ttaggaattc caggcatttt tcatttcgtt cttagcagag gaaaaaaagg
       61 tgcctgaaca actatttgtg tcgtagagtt cataaatgag cccatcaccc tataccagaa
      121 ctgctataat tttatcggaa tgaaaaccat tctctttgat ctcctttagt tcttaaatcc
      181 agcagttgtg tattcaaaca tcaatggaaa tgtggtttca agcttcctct ttcattatct
      241 ttctcaaaga taaaaaagag caaaagaaaa aaagttctga gctttagaga tgaggcaata
      301 tttttacagt aatttcttta tctgatttca tcctgtttac agaagctgct gtttggaaga
      361 gagatggctt ttctttaaat aaa
//
LOCUS       KCPA01001022             705 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 112107tic ultra-conserved element locus
            uce-1703, sequence.
ACCESSION   KCPA01001022
VERSION     KCPA01001022.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 705)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 705)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="112107tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>705
                     /note="ultra-conserved element locus uce-1703"
BASE COUNT          213 a          142 c          131 g          219 t
ORIGIN      
        1 ccaaggatta ttttggaaga aacattagca gccgtcccag cctggtgctt atatctcatt
       61 tgaaacatct actcattcct gaccaacaaa gaaaatttca ataaagtact tttactggtt
      121 taacagcagt gagctcctgg gattgtcaaa gtgctcagtc ttttccgagg agagaaggaa
      181 tcagcagctc aaatataatt aaccttccat tctcaatgca aactgccacg cacaggagct
      241 ctgcagtcta ttagtgaagt tataacggcc aacaggcaga ggcaaaattg gtcaaaaagt
      301 tggctgctgc tgtcatattt ttagaattat gattaatgac actaataatg tggatgatta
      361 ctgatacgtg tatctcctgc agtttatcat attgcactgg ctgcctacgt ccacaataaa
      421 catgatgcta tcatttacct ctttattgaa ggcaatcctt ctcttgaagg agcacattct
      481 aattactttg taatgtttta tgtcttaaac attttgcagc tctggacctt gccaactgct
      541 tcatgtctac cattgattaa ttacagaatg tttaatcaaa atttagaacc taatgcagtc
      601 atttatgaat gtgctgcaat ggttaggctg tcgtcccaag cttggagagt gctggattca
      661 gaattaaatc ccagaaatct ggaagatgcc aaagatttta cctca
//
LOCUS       KCPA01001023             768 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 112217tic ultra-conserved element locus
            uce-1458, sequence.
ACCESSION   KCPA01001023
VERSION     KCPA01001023.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 768)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 768)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..768
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="112217tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>768
                     /note="ultra-conserved element locus uce-1458"
BASE COUNT          247 a          149 c          153 g          219 t
ORIGIN      
        1 tttgtcatgc agctgattaa gaggcaagga aatgaagtta cgaggctgca gtgttatctg
       61 acttctgtaa agcagtggaa tatattaaag tgacatagac aattttgttt taataaagca
      121 tctgtaaatg aggtacacac attcaggtaa tcaacgtgag aataactgac aaaaaattca
      181 gattaattgt catttccatc gattgttagg agggtgatgg tccttaatct cgcatcaatc
      241 tcaatgtgtg ccactaggac aaaagaagag atgctctgct gagatcagag cagctttgcc
      301 ctctattccc aatgtacaaa tacattgtgt ctgcagatgg gcatgagata gctgcggaac
      361 tgctatgatt tcccaaagct cacccccaca aatggatgaa ataagcagct atgtgttctt
      421 ttgctgtctc cctttgcccc ctgtacatta gcatgtaatc cagaggagaa ataacatttt
      481 ttcaatcact agcagacatt caattacagg gcaagcagag agatgcagaa gctggggcag
      541 tccaggtcct gtagaagatc cctgacaatt tccacttcat ttctaaccca caccacttta
      601 ttagtgagga ttacttctta atcctattgc cattgtcaag attatataat taaactcccc
      661 tttcacctct attacagtat gaatgtatta ctcaaaccaa tgaatgaata atagaaggaa
      721 acattgagaa ggctgtaagg aagctcatgg tagaaaggga ttcatata
//
LOCUS       KCPA01001024             278 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 112315tic ultra-conserved element locus
            uce-5745, sequence.
ACCESSION   KCPA01001024
VERSION     KCPA01001024.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 278)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 278)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..278
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="112315tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>278
                     /note="ultra-conserved element locus uce-5745"
BASE COUNT           72 a           58 c           71 g           77 t
ORIGIN      
        1 atgtgtttat ttaaggtctt gtaggccgac tgatgagacc atctttgcct tgtctttgcc
       61 agcagggtac ttattgtctc ctctagaccc atagtcatta gaaccggaat cgctccgctt
      121 gctgtttgcg ctatgcttgg ttggcgtgcc ggggggatgg ctcacctgcc cgttcttctc
      181 gtctgaaaaa agttgtttaa ttacgtcaaa gaagttactc aatgggctgc ctgggtacac
      241 aaaacagagg agacaaaaaa agaaagaaag aaagaagg
//
LOCUS       KCPA01001025             669 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 112423tic ultra-conserved element locus
            uce-5542, sequence.
ACCESSION   KCPA01001025
VERSION     KCPA01001025.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 669)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 669)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..669
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="112423tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>669
                     /note="ultra-conserved element locus uce-5542"
BASE COUNT          199 a          149 c          115 g          206 t
ORIGIN      
        1 cttctattgt ccatgactta tcattgtcag gattctttgc gtttcctcct tatctatttt
       61 gctggaaatc tgaccatttt gaaaggctca cgtagagtta ctgttttaga atgtataaga
      121 atattacttt cactgctttt tgctccaatt cttttctctt cctctgtctc agtttttttt
      181 aaactcttct aaagcactat aaagtaagta tcaaaggtat cctgggtaat tagccattac
      241 agtactgtca cagaggcttc tgcagtcaat acagagataa tttgggcaat ggtgaatgac
      301 agcattgtcc agacttttgg gataatcaag gacacatcca gctgtaccag acatctgtca
      361 gacccatgaa tcatttcaag tagctttgca atatccaggc aactcgagca aagataaaca
      421 cttcagcagc acgcagccac ggaaaaatac tgctgccaca agaaagcatt tagctgctca
      481 gtgctgcagg cctgtctctc aaagccacat ctttgacaca tttttttacc cactgtagta
      541 cgactgaaat ggcatcccct acacatgata ttcattagaa taaaaaagaa aacaagggga
      601 ctcaaaggct gtaattctga taaatgcaac attccctctt gcaaattagg gcactattta
      661 tatcagcct
//
LOCUS       KCPA01001026             604 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 112532tic ultra-conserved element locus
            uce-7414, sequence.
ACCESSION   KCPA01001026
VERSION     KCPA01001026.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 604)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 604)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..604
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="112532tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>604
                     /note="ultra-conserved element locus uce-7414"
BASE COUNT          189 a          118 c          114 g          183 t
ORIGIN      
        1 aagtccttct atcccctctg gaggagcact gtaaatatcc ttgacacctg aaatcactgg
       61 acattgttag agtaatgcta acagagaggg ttaacagctt gtgcgtgtac aaaatattat
      121 tatgaccttg tgctgaccac attctatgaa gtgttacatg atcagggaca gggaagttgc
      181 ttaatggaag ttatatagta gctagatgta tccttgtcac acttcatcta aactgataca
      241 ttgcaatggt ccacactgct cagacctggc aattactgtc caattccaat ctattccaca
      301 ctgccactat aatgaaaaat aattaggacc ctgaaaatga gttttcacat gaaatggttt
      361 cagtacttgg acacaatcgc ctttggcaga tggctttggg tttgctttaa tataataaag
      421 acagttaatc atctctaaag agtgcacaga atgaataaac ttttaacact actttctcct
      481 ctaaaactct catattgatc aaatgaatac tgtagagttc atgtgtctgt gggtgagtgt
      541 tccacacatt cttatacatc ctggagaaga accagggcca attgcggagt ttagaaacta
      601 atat
//
LOCUS       KCPA01001027             494 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 112640tic ultra-conserved element locus
            uce-1514, sequence.
ACCESSION   KCPA01001027
VERSION     KCPA01001027.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 494)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 494)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..494
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="112640tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>494
                     /note="ultra-conserved element locus uce-1514"
BASE COUNT          102 a          120 c          115 g          157 t
ORIGIN      
        1 cctcccttgt atgttacaag ttatgatgtg tggatgaagg ctttttccca tgcagtaatg
       61 actgtatact gagatttcaa ggggctgttc atgacaatcc cattttctgt gtaatttcat
      121 ggttgtcttc ttgaatgaag atattggctg ctctgaagca ggaggtcaga tgctcctgct
      181 ccctttcagt attgttccgg agtatgtttc ctttcagctg atgaaaagta attcatcatt
      241 tacacccttg aattctgcca gcgttttttt gaacaacttt tctttccccg tggtaccttg
      301 ggcccatgaa agagataaat aggttcaata cagcgccggg ccccggatcc tgggagcagg
      361 ttcggccttg gaggccccga gctgcccctt tctcatgatg gagtttgtca cctttctacc
      421 tcgggaagtc aaatcctgtc gactcagcca tctctcagcc tctctgaagt ggctttggca
      481 cccactgggg catg
//
LOCUS       KCPA01001028             602 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 112747tic ultra-conserved element locus
            uce-377, sequence.
ACCESSION   KCPA01001028
VERSION     KCPA01001028.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 602)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 602)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..602
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="112747tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>602
                     /note="ultra-conserved element locus uce-377"
BASE COUNT          193 a          114 c           93 g          202 t
ORIGIN      
        1 ctttatagtt aacagatagc ctacacgttc ctttcagttc atgggctcca cactgattaa
       61 ggaatgttcc aaatgcttaa tttatagcgg ctgtatatgt aagggtttta gatgctagga
      121 taaatcacca ctttcctcat tttagatctg tatttaatgt atatgataca tttaaataat
      181 tattaaactg gctgatgcgt aaacgggagt ccaattccac atcagatatt gctctgcttt
      241 tcaagctgct gtaataaaac cattcttttt atagcatgcc attattagaa accaatttca
      301 gaattattta taacctggaa tggcttatta agcagcaatg cgagaatcat gcaaattacg
      361 cgatcaaatg caatataata agcataatca ttagtctcta gcacggatta attaactttc
      421 aatattttat ttacataaaa actaaatcag tgaaataact tctgcacagt caggcttgcc
      481 ttccaatatt ttatatgaac aaaaataatg tgctgtaatt ccattgaccg tgtcccccac
      541 aatggtcccg tcacctgcca catcttaata ggggacaagc tgagagtatt ttctagtttt
      601 ct
//
LOCUS       KCPA01001029             708 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 112857tic ultra-conserved element locus
            uce-1858, sequence.
ACCESSION   KCPA01001029
VERSION     KCPA01001029.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 708)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 708)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..708
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="112857tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>708
                     /note="ultra-conserved element locus uce-1858"
BASE COUNT          216 a          130 c          151 g          211 t
ORIGIN      
        1 actttatttt gatactgaca tttaaacaat aaaataaagc catttaaaac aaatagtggt
       61 gcttcaagtg tctgagctgt caagatatca aattatataa cttggaaaaa tcagaattca
      121 ttgttaatgg tatgcactta acacaaaggg tcgctggagt actaaccaga tatatattca
      181 gctaccatgt tggagctaac aggctgtatt cctttagata gaattgacta tattcactta
      241 aatggacttg actccagtac aatcactgta ttcaaatgtc aaaaaaaaga gaaagaggat
      301 gtcacgtagg gtcacaaatt atgttggatt ttgacagatt gtagccttgc tttacaagag
      361 cggtaacatc tcatttgtca ccgtttgatc tgtaagtgcg ggaatgagag cggaaggccc
      421 tccatctcca ccgcaattta atcgctctga ggccgacagt ggcagctaaa gccacctgcc
      481 catgcactgt actgctgatc tgttttaatt taatcgtccg tcagctggga tgaaagcata
      541 aatcgtctcc ctttgatctg caaacggtgt ggttcttttg taaagcacgg tgcagaatca
      601 gggagacggt ctttgcattt agtgcaacac aggcaacgcg ggcgaaagct tgtaagtgat
      661 atttcactgt agcagtaaag aaggagttgt tctttttgtt aattttta
//
LOCUS       KCPA01001030             541 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 112963tic ultra-conserved element locus
            uce-7977, sequence.
ACCESSION   KCPA01001030
VERSION     KCPA01001030.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 541)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 541)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..541
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="112963tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>541
                     /note="ultra-conserved element locus uce-7977"
BASE COUNT          199 a           99 c           99 g          144 t
ORIGIN      
        1 tgatgactca caataatttc atatgaaagg tcagcattct aatatgtgac acttttgtga
       61 tccctatata atagtcacag ataacttttg atttgatatt atgtaccaac attagatgag
      121 cagcagattt gtgcttaaaa tccctttcca ttgtacatag gtgataacaa taagaatcca
      181 aaactgatac tatctattac tctactgaaa gcattactat attggcaaag aagctgcaga
      241 cacaatgcag tggaaaaatg catatgccat tatgaacaat gaaagcccta aaaggaggct
      301 agggcaaaag tacaatatat atggcagaag gtgaacaaca agcaccttgc ttcagctctc
      361 aaaaaggcaa ttctgagcat ggcagctaca actaatagca caacagaaaa agggcactgt
      421 acagataaga tactgcagag ccccaaagta attacataat cttttcccag ctagttatta
      481 aagtcctcgt ggaaaactgt aagcttttgt acagtgaata gtataaagtg ccgctgggat
      541 a
//
LOCUS       KCPA01001031             648 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 113076tic ultra-conserved element locus
            uce-119, sequence.
ACCESSION   KCPA01001031
VERSION     KCPA01001031.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 648)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 648)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..648
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="113076tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>648
                     /note="ultra-conserved element locus uce-119"
BASE COUNT          187 a          131 c           98 g          232 t
ORIGIN      
        1 aaaatgtcag agttgatacc aatacaagga aagtaaattg gcacaattct taaatgcatt
       61 aaaccctttg ctttgttatg actccttcag gaagcacctc aagatgtact ccatatccat
      121 agacatatat atgtacagta gtttcaataa tccactaata tttagacttg gcatgcttat
      181 tagctttaca gaaatacttc tttcctgtta catatgagct tttcagtcag ttgttctaaa
      241 cttactaaga attctctgct ctaacaatag taaaatgtct gtatgtcact ggttctgtta
      301 attctaatga ttggtcctag gctgttcctc cccttccttt aggaatggta ccttccagtc
      361 tctccatgtg catgaaaagt gacaagcatg ggtccccata tttctactta ttgggccacc
      421 ctaaagacac ggtttgtaaa ctctgcatgt atatttttgt ttctcataac tgttaataga
      481 gtattttcca actacatgct agcttcaact tttctttcat aactgattat ctaagacatc
      541 aaagcagcta tgcattctac aaatgtattt tttgcatgtt acactgctgc tagtgtatat
      601 atccactcat ggcaaaattt tatcttctga atatgactgt tcaggtag
//
LOCUS       KCPA01001032             575 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 113185tic ultra-conserved element locus
            uce-4775, sequence.
ACCESSION   KCPA01001032
VERSION     KCPA01001032.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 575)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 575)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="113185tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>575
                     /note="ultra-conserved element locus uce-4775"
BASE COUNT          192 a          116 c           90 g          177 t
ORIGIN      
        1 ccaactccct gcatcccttc aacccaaaat ttccattaca cttaaaacaa ctgtttatta
       61 aagtgcatgg gcaagaaaac agcctaacag atctcccaag ccacagatat tcagcctaac
      121 atgatctcct ttaatgatca gggtttcttc agaactatga tttagatgtt agaagaaata
      181 gtgatttata aattttctac acaaatgtgc cccgacatct ccatctccaa ttgacacaga
      241 acatagttat acataccaca gtttggtggt taacttgaat cacttcatcc ccagcatgga
      301 ttttcttgca ccgatctgca ggtgactgaa tttaaaataa aagagatgat caagcataca
      361 ggtcttactg gtcatcatct ctctttcagc agtatgattg ctaagctatg caaatcaggt
      421 tagattgata gacattctac tgtgaaataa agaaatattt aataaatcag tttgttcttg
      481 ttaaaagata ggcactattc tacacaataa aacgttaaga gaggtcttga gtcctaagga
      541 tttttttgaa tttcatcctg acaaaaggat gcttt
//
LOCUS       KCPA01001033             668 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 113293tic ultra-conserved element locus
            uce-1093, sequence.
ACCESSION   KCPA01001033
VERSION     KCPA01001033.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 668)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 668)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="113293tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>668
                     /note="ultra-conserved element locus uce-1093"
BASE COUNT          231 a          139 c          126 g          172 t
ORIGIN      
        1 aacagaacat ccgtattatc atttgaaggg aggggatgga ctggcgaggg aaagcttccc
       61 taatcaatcc agctgtagga atcagcctct taaaaaaata ctttaaaaat tctgcctctt
      121 accatagcaa ttacttcagt tgctttcctt ccctttagtt aaaaatttat atatgcaaat
      181 atacatctac atatagataa tcacacacat acatatgatc agactttaca cactgcggaa
      241 gacaaaataa ctttggaggc gtaaatctta atgtcaatga caggaaggct ttggtgaacc
      301 attaccataa atctgacaaa cgctaatttg atgggtggct gtatctgtct gctgcaagac
      361 cagtctagac agtctattga gaaatcctaa aacacaactg tttgttccct gtaacaccat
      421 ctggatatgg caataagagc cgacccagtg ccattcacac atggatcaaa gcacatgcta
      481 atgccatcat gaagtcatac acataaaaaa ttcaatctga gaactctatg caattttcct
      541 aagtcctcag tgaagaaacc tcagacttag cacaactcaa gctaagtgca tgaagagggg
      601 gagagggtgg aaaaaaagaa gagaatattt aatgagcttg gccttcccga ggaatgttag
      661 gccaccca
//
LOCUS       KCPA01001034             561 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 113400tic ultra-conserved element locus
            uce-1808, sequence.
ACCESSION   KCPA01001034
VERSION     KCPA01001034.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 561)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 561)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="113400tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>561
                     /note="ultra-conserved element locus uce-1808"
BASE COUNT          187 a          102 c          106 g          166 t
ORIGIN      
        1 atacatacaa tataaaatgt catgccactc atgaatacca tatacagaaa catggaacaa
       61 ttgattattt taaaaaagtg ataaattaaa aggtattctt attttaaact cactcacttg
      121 tgaccaatct catgtgcaat ggtaaaagct gaacctaggc caatgtcttc attaatgctg
      181 cagctccttt caggctcaca cattccagcc acagaggcca agcctgaata aacagaagga
      241 gacacaaagg gtcatgccaa ggtgtttcag tcttaaaagt cctagttata aatgcctgga
      301 ttctttttaa taacttctat gcacagaagg agcagttggc aaaaggttaa ctttctagtc
      361 atttgcaaaa tcactggggg gaatttcact ttgccggcta gacattaata ttttttgaac
      421 tgcagtcagt gctggaaaat gtctagacta ggggttagat ttataaattt tacttctggt
      481 aacttgggac cacctagtaa cttgagccag gagagggaat tcaagaaagc atttctattt
      541 taacattctt ggtctgaaga a
//
LOCUS       KCPA01001035             724 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 113508tic ultra-conserved element locus
            uce-7399, sequence.
ACCESSION   KCPA01001035
VERSION     KCPA01001035.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 724)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 724)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..724
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="113508tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>724
                     /note="ultra-conserved element locus uce-7399"
BASE COUNT          187 a          126 c          160 g          251 t
ORIGIN      
        1 agtcagggta ggttgggcag gaaaacggga acgaggaggg taaataactg cagcaaaaac
       61 aggttctgag gaatacacat aattttgtct gctttagatc acaatagaat ttttaataaa
      121 taaatttctt tttctttgta aattttgaaa cagtagattt agcccagtca tttgtgtcat
      181 ttgttttata aaccatcttt tgttgtcccc ccaccccacc ccttataaat gttttagatt
      241 tgagtctctt gaacattgtc tttcgagttc attcggatca ataacggttc atgcactgaa
      301 ctgtgtattg aatttattgt gttaactgtt gttgtgtggt tgaaaggaga tttataagag
      361 ttatagtgat ttaagtgctc atgctctatt gctggcatgg gcaaatgact ctcaatgggt
      421 gtgtcacctg taagctcatc atccacatta atgatctcta cagtccgtgt tggagcatga
      481 tggttctgcc ggtgatgctg tttcctcatt ttgtagaaaa ttaccagcat cacagcagcc
      541 atgagagtga tagccacaaa acaaccaatt atgattttgg tagtcttcat aacctcatct
      601 attcctggga tcccattgtt tgcgtccgtc acaggaatgg tgaacgtttt ttctgtagat
      661 cttgtgctct gtggagtgag tgaggttgtc atgttaatgg tttcccagtt ggtaactggt
      721 gtgg
//
LOCUS       KCPA01001036             531 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 113619tic ultra-conserved element locus
            uce-3479, sequence.
ACCESSION   KCPA01001036
VERSION     KCPA01001036.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 531)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 531)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="113619tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>531
                     /note="ultra-conserved element locus uce-3479"
BASE COUNT          162 a           99 c          125 g          145 t
ORIGIN      
        1 cttcaaatta tattttagtc acggtcagag ctctgtggcc agtctttcta tttcctcatc
       61 tcagaaggtg tccactaagg attcccactt aaattgagca ggagaggaca gtgcagactg
      121 aatacaaata gaagtggaac aaggttagcg aagtgtgcgg ttggtgagat tgatgttgat
      181 acccttcact gccaagtgaa atgccaataa tgcttgtata gcattttgcg agggcaatgg
      241 gagtatcgat tcctaagcaa taataaagaa tgaagctgct ctctcaggta taaaaatatt
      301 ggcaactgtt acaaagaatt gactcataga ggcctgagtg ttggcctatc ttaatacaaa
      361 taattcaggc ttcagaagga tttcaagagc agccaggcat ggtcctcagg cacattctct
      421 gctattaatt tatctgcagc tttcacaagt gtccagccaa ttgggtgcag ggacaaaaat
      481 ggatttctaa aggcttgttg ggagacaata tgaaaagcca gctgagccat g
//
LOCUS       KCPA01001037             481 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 113729tic ultra-conserved element locus
            uce-7649, sequence.
ACCESSION   KCPA01001037
VERSION     KCPA01001037.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 481)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 481)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="113729tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>481
                     /note="ultra-conserved element locus uce-7649"
BASE COUNT          128 a          123 c          102 g          128 t
ORIGIN      
        1 ctcctcacct agccctgccc accctcccgg aaatggtctc tcccctctga agccgtctcc
       61 tacagcagtg cgaggtcagg cacacaaagg tgctgtcccc tgattgcagc aaacaccgcc
      121 atgtgttgta tgtttgatga attaaaagga tgctgccaac ttaattacac tgtaaccctt
      181 caataaagga agggcagagc tgattaacta gtgaataatt gggggctgat tgatggcttt
      241 ctccctcact gctaaaggct gtatatataa ttattttgcc tgtgggccta attttgccac
      301 tgttagcttc cacttttgtc atcagctgta atttatggat ggggcctgaa gccttaaaaa
      361 aggctggaaa atgaaatagc cccaaatccc cagatatgtc acctggaaat ggccagcagg
      421 cagcctttaa catcaacatt tgcagccatt tagcagcatt aacacctcat gcttagccgg
      481 a
//
LOCUS       KCPA01001038             545 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 113838tic ultra-conserved element locus
            uce-6569, sequence.
ACCESSION   KCPA01001038
VERSION     KCPA01001038.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 545)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 545)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..545
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="113838tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>545
                     /note="ultra-conserved element locus uce-6569"
BASE COUNT          173 a          109 c           84 g          179 t
ORIGIN      
        1 tttatcaaca gtgactagtc accccttcct ctggcagcag taattacgag tggtctttca
       61 tcttctttaa caagctctac ttcgcacgca aagtctcagt gacctcctca aggtgtgagt
      121 cgtttatcag ggcccattca gcagcagcag tctctttcca gtacagtcct tggtatggct
      181 aaattccatt gtcccttttt cagcagtcaa aaatccatga taaattctgt acaacactgt
      241 agttaatata acagcagcac cagatattat attaattcat ttgctaaaag ctgtttgcaa
      301 ttatctctct attgacaata tttaaaagta aatcaatgta catctctaaa tatcagaaat
      361 gtatactttg ataaatacat tattgtacaa ggattttgac atgcaggtca tgctattggg
      421 cttggcaaga acatgttaca tggtcaacaa taaatttaat ttcttttcct aacaaaaaag
      481 taaaacatga cagtcaggta ttattcaaca atttcaagga tcacttaaga tttcagtcat
      541 tatgg
//
LOCUS       KCPA01001039             399 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 113945tic ultra-conserved element locus
            uce-2313, sequence.
ACCESSION   KCPA01001039
VERSION     KCPA01001039.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 399)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 399)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="113945tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>399
                     /note="ultra-conserved element locus uce-2313"
BASE COUNT          146 a           78 c           56 g          119 t
ORIGIN      
        1 ttcctattct gaggctaaat ttgacaatat ctaaagaaca gtagctataa atcttacaga
       61 taccaattaa accagaatgc ctttatgaaa atttttttct gttctcttat ttattgacag
      121 attttttttt agttacaaca caatgaaacg atggtaagta cataagatgc aatagtataa
      181 aaagttttaa cccttccctt ggttaagaca cttacagcag acaagaactg ccccacccca
      241 attccccctt ctcaaatgaa aacaaaaaat aaatataaat taataaatat aaaacaaatc
      301 actgcacagc ccttaactct ttgattgcca tggcaagaac cataatgatg attctagcat
      361 gtgacgttcg gtggttaaag gttgccgcag cagtcaaag
//
LOCUS       KCPA01001040             873 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 114056tic ultra-conserved element locus
            uce-342, sequence.
ACCESSION   KCPA01001040
VERSION     KCPA01001040.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 873)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 873)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..873
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="114056tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>873
                     /note="ultra-conserved element locus uce-342"
BASE COUNT          320 a          174 c          129 g          250 t
ORIGIN      
        1 tttctgaagt tttgaaggtg aaacagaaaa atgaaactga aataacttat aatgcactat
       61 ttaactgcac taataaggat taaccttaca gaatatgcag gaaaaaacgc acgtatgtcc
      121 gcttacacac atgacacgag ccatacctac aaaagacctc ctcccatggc tacaccattg
      181 ctttgcaaac aacaagctaa tttgggttcc tatcatgcat ctgatcggtc atacagcaat
      241 acaaaacaga aataagtaaa gacgaccatc tgcttgttag ctgaaactat aaaagtacat
      301 ctttttaata aacaataaaa ttagtttgac agggcagaga ccacctgaat agaaaatcaa
      361 atatttcatg ttatttaagg tgtatgtctg ctggctatta aaatactcct ctttaattta
      421 ttacagcaac acacacaata ctcatgtcat cctcattttc taaatcaata atcagcacag
      481 catgcttcat taacagtgac caatcacgaa tgagctgggg atctcatttt acaacatgag
      541 cattcctaag acataaacca tctgctactt gtagtaacag aaaaatcaaa ttaatccatt
      601 cttatcatgc attcagattt taaagcaatt aaagatgctc ttagtgtaat cgcagccaca
      661 gaagtagttc tgtaatgagg aaagcaaact cttcactgaa ctttctgtca ttctcaatac
      721 atttgaaaac tttacaagct ttctgcactc cagtgggcca ttgttctctg aacacagatg
      781 ttgaaaacaa caagcaattt ttattaaaca tttaatcttt gcacatttga aggagtttaa
      841 atactgaaca gtgatcaaaa aggggcataa aac
//
LOCUS       KCPA01001041             487 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 114167tic ultra-conserved element locus
            uce-7107, sequence.
ACCESSION   KCPA01001041
VERSION     KCPA01001041.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 487)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 487)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="114167tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>487
                     /note="ultra-conserved element locus uce-7107"
BASE COUNT          147 a           99 c           86 g          155 t
ORIGIN      
        1 cacagagtga gcggcataat ttaaaaatca aagaaattca tttcagtagt aaaaggttaa
       61 cagcctttag gaggaacact ttttaatcac ccacgtctag actctatcac tcgaatcacc
      121 ggcagcagga gtgaaatatg gctaagcccc cgtcaccaaa cagcacctaa agactgttgt
      181 atttaatcat gtctgtgcac tagttatgga ttttcattat gattcccgat gctgttgcgc
      241 tgtgtaaaat attaatatcc atagtaatga tgcatgaagc ttggagtgta atttcttcac
      301 tctccttgtc tgatattaaa ttgttaccac tttatcattt gtgtagaact gcacgtttca
      361 attaatcttt ccgtatcagc agccctgatt aatatagatc atgattcata agcttatcgt
      421 cactatagtt ttaacagatc atttataaag atcttaaatt tcagggcctg ggaggcgcag
      481 ccactcc
//
LOCUS       KCPA01001042             534 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 114275tic ultra-conserved element locus
            uce-5834, sequence.
ACCESSION   KCPA01001042
VERSION     KCPA01001042.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 534)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 534)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="114275tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>534
                     /note="ultra-conserved element locus uce-5834"
BASE COUNT          149 a          110 c          106 g          169 t
ORIGIN      
        1 ttttattgcc ttgttttcct gtaaagccaa caagttaaac aacaggattt aaaagagata
       61 atacatcctc ctcctgcttc ctggtctcct tgaggtgctc cagttcaact tattggcctt
      121 ttgcaggtga tttatagaac ccaatggtta ttgtatggct aatgattcat ggaacttcat
      181 taaataccaa gtatgcgcct gcttactgtc tgtgcacact gcatattaga acctttgcac
      241 tttgcaaatt gcctccatta aattcgcaga caaaaggtcc tctcagtagc ttacatattt
      301 tcccacatgt gagagagcaa ttggaaactt cctcttgata actttttgaa ttagaattta
      361 tgagaagggt cttttggtct cgttgcctaa gggctgaaac agatcccagt gtgtacaagc
      421 gttcctttga tgcgtggagc tgcacagggt aacatttttt aacaggatca aaaagcgtaa
      481 tgcagggaca atgtgtctct gacacaagga gtttttccaa ggctaatcca aaag
//
LOCUS       KCPA01001043             504 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 114384tic ultra-conserved element locus
            uce-7513, sequence.
ACCESSION   KCPA01001043
VERSION     KCPA01001043.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 504)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 504)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="114384tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>504
                     /note="ultra-conserved element locus uce-7513"
BASE COUNT          155 a           97 c           90 g          162 t
ORIGIN      
        1 tttcacaatt agcatagtcc tatttcagtg gttttccaca tcttgagaca actctttgac
       61 aaggatgaat aagattagct agtaggagca ttttacttgt tcactggaca tcaggcagat
      121 gtggggataa aactgtcaag tctgaaaaca caaagagaaa tattgctatt ttctattatt
      181 cacattcttc ccatgggctg tttgctcagt tgccatggca taggcggtga gattttataa
      241 tttttcccct gtctgccatg tgctcataca acaatgtgaa tttaatcagt ccagacagtt
      301 ggttgtgttt tgtccatgtg agtggaataa aacttttctc accagctaaa cccacaaagt
      361 atctaaaagc cataaataat cagtaactcc tatgacttgc acctgcttgc tttatttgac
      421 caaggataca aaaaggctca tataatgaac agtgttccca agcattaatc acctttgatt
      481 gcttataaaa atcaaagtag atgt
//
LOCUS       KCPA01001044             703 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 114493tic ultra-conserved element locus
            uce-2553, sequence.
ACCESSION   KCPA01001044
VERSION     KCPA01001044.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 703)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 703)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..703
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="114493tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>703
                     /note="ultra-conserved element locus uce-2553"
BASE COUNT          238 a          112 c          151 g          202 t
ORIGIN      
        1 tttccacaac attttgtgca tacaagtagg ttaacaaatt caaaatctac ccaaatattt
       61 gttataaact cctatctatc tctcacacat atgcatacag ataaatgtgt acacgtatat
      121 cgtatatgta ctcattctct aggtaatcag agacacagat aaaataaagc ttctagagtg
      181 acagacattc tgcagacagg gttgttagtt tatgtaggct ataggcagag tcgactggaa
      241 aattttgatc actttaattt actatatcca gcatgcctgc tgtactcgtc cagcactttt
      301 atcaagccct gtgaggtggt attgattttt ttattttcta tgtaggataa gaagacagag
      361 agttaggagc aagagtgaat gaagaacttt cctcagatta ctgctattct ctagcttatt
      421 gcatcctgtc gtttgtagtt tcagatgatg tccagtatgt cagggttgct tgaagcaata
      481 aacagggtga ataacaatgg aaaggctaga tgagaaagat tgaaaaagga gaaagaggca
      541 gcaaagaaag taagaaagtg aatgtgagaa ataggagcag aggttgagaa aaagtgtcct
      601 aggtgtagag agcttgataa gtgcattcct ttaaagaaac tgtaaccagc catggcagtt
      661 tttcgaccaa gagctacaca taaaaccaga attgtgaagg act
//
LOCUS       KCPA01001045             592 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 114605tic ultra-conserved element locus
            uce-4339, sequence.
ACCESSION   KCPA01001045
VERSION     KCPA01001045.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 592)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 592)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..592
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="114605tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>592
                     /note="ultra-conserved element locus uce-4339"
BASE COUNT          174 a          127 c           96 g          195 t
ORIGIN      
        1 tttgtgagga aacctctaat tgtaagcgac actactcaca ctgccctctt aaacactggc
       61 ccaaggcatg tgagaaagaa atattctaac agctatgtct cacctttatg ggtgtacacc
      121 aaagaggaac agaaaataca tagcacatca ttttgcattt ttattataag gtcgaaacta
      181 aacactggga aatcttgtca gtgcctgcta agctgattcc aattaaagct tctggcagag
      241 ttccagctgt tttactacct caaatagcac tgaacataac aaggtttatg aagcattcaa
      301 aagtcaaata ccctattaac ataaacatgt agtgaaatca actcttctac aattttcagc
      361 ttgctttctt tctttcattt acgttggact aatctaagat gatgtctgtt ttctttgttg
      421 catctttttt tctgcttgct ggaatgcaaa acaagattta gtatttgaac agtgcctgat
      481 ttgccttgag aacctgctcc ctgtggcaat tttattacaa cactttcagt cccacactgt
      541 ttcttagcag catgctgaag gtttgcttcc tactctgctt ttaactccaa aa
//
LOCUS       KCPA01001046             827 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 114716tic ultra-conserved element locus
            uce-1598, sequence.
ACCESSION   KCPA01001046
VERSION     KCPA01001046.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 827)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 827)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..827
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="114716tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>827
                     /note="ultra-conserved element locus uce-1598"
BASE COUNT          236 a          162 c          167 g          262 t
ORIGIN      
        1 ataagggaag agaggctttt tctaagtaat ttgcaaggat ggttaaaact gcagacaggc
       61 agtaggattg caataaataa taaactgtgg gccacaacag tgagctcaca gataatataa
      121 aatacagttc ctaagcgagt aacgagggga ggaggggggg agagaaagtt cctgtgcact
      181 ttgttcaagg ttctgcacct ctctaagcag ctgtcacatc cgtacattat ggtacattga
      241 atctgaatga ggctctccac atcaaaacct tgcatccatt atgatatcat ctcctgctct
      301 aagctgtaat gcttattaat tctgcaccca tactctccaa gcttcagcaa atgtattcca
      361 tcagcctagc atttaattta attagtacag ctgggctctc attctccttt ctgtgtcaga
      421 ggtattgtca gcacgttctg ctataacaca attactgatt gcttttagat aggcagaaat
      481 atgattaggg tattgggtga ctgtatcata agccttatta gattcatttg aaatctggag
      541 ataaatagga aacttttatt tgcagtgtaa tgagattatg cttattaggc caaggcctca
      601 caaccttttg caaagaacat agtgtatcac taggattata ctctggaacc acactttttg
      661 ctcatagcat ccaagcaatt tctcagcagc tttgagattt aactgttgta gccctgtata
      721 cattttagat ttgttttctg gctcagtggc tttctccttt gtgtgtgcac cttccaccac
      781 atgttttctt ctgcttaacc aggaggatgt tttgctcaaa agaggaa
//
LOCUS       KCPA01001047             790 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 114827tic ultra-conserved element locus
            uce-7352, sequence.
ACCESSION   KCPA01001047
VERSION     KCPA01001047.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 790)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 790)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..790
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="114827tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>790
                     /note="ultra-conserved element locus uce-7352"
BASE COUNT          244 a          162 c          132 g          252 t
ORIGIN      
        1 caaatttgtc cctgactgtt ctgctctcaa tggaatctga caggtcatca ttcaccttat
       61 gatgtcgttt caaccccatt atcttttcta ccttgtttta gtacctctct ctggcaaatg
      121 tagtgagtaa gatgttgaag aactgaggtg gtatttcagg ctatctgcca gcaagtgctg
      181 aataataatg gaatttgttt gcttacaaat tgagcaactg aatttagaca ttgagggggt
      241 cacctctgtg atttgtccca tccccagatg gtcaaaaagg cagaattaca gggtcaattg
      301 tggaaccctt ttgtggtagc acaacatacc aaccatacaa ctactaggcc atcccccaca
      361 gttacaagta tttcaaggtc aatttatcaa tttaacagct tcatcttctt aatcactaaa
      421 cttctgtctc tttgagcttg tgctgaaaga ctgtggctgc taattaaaat ggagctttac
      481 tagcaagtac acaaattaga tcctgtcagt aagtttattc taactattgg tcatttctaa
      541 atgccttttt aatcccctaa tttttacatt aaaattcaaa agcctaacaa tcttaatcac
      601 ccctacatca aattcatcat taagaacagg aagccagatg gtataatttt gatttaccgg
      661 acttcagcgt gaattaatgt actgagtgcc gataatgaat acatcaaacc tgatattgca
      721 gaaacctatg aatctggcat gttaaattaa taacacactt tgcacaatga aagcatgtaa
      781 gctcgtataa
//
LOCUS       KCPA01001048             615 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 114936tic ultra-conserved element locus
            uce-7032, sequence.
ACCESSION   KCPA01001048
VERSION     KCPA01001048.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 615)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 615)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="114936tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>615
                     /note="ultra-conserved element locus uce-7032"
BASE COUNT          147 a          128 c          140 g          200 t
ORIGIN      
        1 acctggcagg tgtttccggt gagcagctca caccagggtg ccgccttctc actatctccg
       61 tgccttggga agttgttgaa aggattacaa ggtcccttca tttttcatac gcctgccagc
      121 ataatattgt gcctaacctc acatttgggc attgcccgtt ctgcagtgca tgtctagtgt
      181 ttatttcagt gtctgtcaga gacccagggt taaaactatt ggaggtccag atgacatctg
      241 gcttctcagc tcctccagaa tattggctgc agtgtttatc agtgcattat tcatcaaaac
      301 tgatgatgca aagtacaaca tgctgtctgc agctcagcgt aagagtggaa agaagttggc
      361 agaaatgcct agtgttctgt gagcagcatg taatcaatag tctgggtgct tgttcacttt
      421 atgttgatga ctattccctc tggtacgtct ttgtatattt ttgggttctc tgtattacca
      481 gctgtgcgat ttttctctct tttcttgata ccagctttga tagaacagaa ggggcaacct
      541 tttgtgcaat aggtgtcaaa tcaaataaac tatttgcaca aagcctggaa atgagagtca
      601 tttagttgag atttt
//
LOCUS       KCPA01001049             538 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 115045tic ultra-conserved element locus
            uce-913, sequence.
ACCESSION   KCPA01001049
VERSION     KCPA01001049.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 538)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 538)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..538
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="115045tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>538
                     /note="ultra-conserved element locus uce-913"
BASE COUNT          152 a          115 c           97 g          174 t
ORIGIN      
        1 tgttagccta acccaaaatg cgttcactgg atttgaagag agaactccca ttccatttta
       61 ccttcacaat ggtgctggaa tggttgaata aagtgtggcc ctgctgccca tatgccattc
      121 agcttctgtc tgtctttttg tttacactgg gaatacaata ggaactatag tccttccaat
      181 gcatcattta taagtgtatt ctacctctga atgtacagac agaactggct ctgtgaatga
      241 gctctgtgaa tattgccaag acactgtgct ttgttcagca ttattcttca caatagatac
      301 cacactttgg aagtaatttt aaaaagggaa tcaaaatagt ggtactttta gcctttgttt
      361 cttttatacc acactgcatt ctctgtctct cactcagctg cttctattat actgacaaat
      421 taaataaacc actccattgc taaagaggct tgggcgggct gggcttcggt acactgccgc
      481 acgaggaagt cgaaataaac atttatacca gttttattct taacaaattt aagctaac
//
LOCUS       KCPA01001050             608 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 115157tic ultra-conserved element locus
            uce-7833, sequence.
ACCESSION   KCPA01001050
VERSION     KCPA01001050.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 608)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 608)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="115157tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>608
                     /note="ultra-conserved element locus uce-7833"
BASE COUNT          195 a          105 c          135 g          173 t
ORIGIN      
        1 caaactggtc ctgtggtaag cattacagta gaggcattgc taattattta tttcctgctg
       61 ttaagcggaa aacaggcttg actgccctga caacagctgc agcattacaa tgtgtgaaac
      121 actatgaact tgatgtgcta gctatcctga agagctctgg gggcagtggg tattacaagc
      181 aggtagacta gttgtcagaa gagccttctg aagagtccta gtgcatcaac agcaattaat
      241 gcaggtggta ttttagacaa gggagctaat gagctttaat atgcatgcag gtgagggagt
      301 gctgaatcag tagagccatt aatgaaccta tgacagccta attagctaca atttaaaatc
      361 tatggaatct aatcagaaga gctgaacact gctgcaaatc tgtgtatgaa tgagtctttc
      421 taaatactcc aatctgttgc ttagtcactg attgatagta attgccctcc attgtgtata
      481 ggaaaatgcc caattttgtt ctgatagagg aggacacaac attgaagtta aatgcctgag
      541 atatttgact gcttaagttt taatcaggag aaaaaaaatc aaagtaaaat taatttccag
      601 ccctgaat
//
LOCUS       KCPA01001051             406 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 115263tic ultra-conserved element locus
            uce-7661, sequence.
ACCESSION   KCPA01001051
VERSION     KCPA01001051.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 406)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 406)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="115263tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>406
                     /note="ultra-conserved element locus uce-7661"
BASE COUNT          113 a           84 c           88 g          121 t
ORIGIN      
        1 ggggtcagat cccaatgatc atatcatatc ttccggacaa aaaccctccc ccggtgtcag
       61 ggtaaggatc cacacacaag ggttagttca gaggtgtacc cataggcaaa agctgaggta
      121 ggtagcccac tgggcacagc tgatttgctt taataggtgt tgattacact gctcatattg
      181 catgaaatta aaaagcttac aaatgttatg agccattacc cttccattta agagatctta
      241 tgacaagtta gcaacatcta atgaaatcct ttttaaaatg ccataggcac gagattttgc
      301 tttgaaatgc aacttgcgga gttatttctg caagtttgca tttcttgcac atctttgaga
      361 tgctctgatt tggaagctgg tgggatactt cagttccccg ttgtgc
//
LOCUS       KCPA01001052             462 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 115370tic ultra-conserved element locus
            uce-3610, sequence.
ACCESSION   KCPA01001052
VERSION     KCPA01001052.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 462)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 462)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="115370tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>462
                     /note="ultra-conserved element locus uce-3610"
BASE COUNT          116 a          131 c          109 g          106 t
ORIGIN      
        1 aattagacct caggtccctc atcttttttc cattcactgc tttcaacggg gcaaatatta
       61 ccccccgaag tcccccgggg ctttatttgt gtgatttctg cctcggcagc cccgctcccc
      121 tcccccagca gcgcactaca aagcgtgttg tacagggact ccattaatcc tacatttcct
      181 agatggtatc tgaggcacag tgggtttcca cagaaattaa tttgtcctga caacaggcct
      241 aaagattgga gtccagggat cacttggcaa attcccttta aactgagcac aataataaac
      301 agaaagctga taacgacagt tctcaaagac cacacagagg ccggagcctg agccgaggcg
      361 ctcggcgcgg atccgcggat gcctggagcc gggagcttga acgcctgata ggaaaatgaa
      421 ctgatttatg cactcccagc accgggaggg cttgctccag ct
//
LOCUS       KCPA01001053             331 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 115471tic ultra-conserved element locus
            uce-3859, sequence.
ACCESSION   KCPA01001053
VERSION     KCPA01001053.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 331)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 331)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="115471tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>331
                     /note="ultra-conserved element locus uce-3859"
BASE COUNT           85 a           93 c           88 g           65 t
ORIGIN      
        1 agtccatcag gacggagcta ctggtgggat ggagctgtgc caaattctga caactggaat
       61 cactgaccca aactcacttt gtggtgctac gctgctgctg aaaacctcag aaacttacca
      121 tctaagagct ccagagttac agtgccatca acgtattccc accagtgctt cccgtccgtg
      181 gagactggga tctcccagtt ggaccactta caggccaggt ggatacagac gcaggccaca
      241 acgggcgggg tgtactgcag gctgaaggtg gtcaggtgca ggctgacaaa caaaaagcca
      301 tcaactcctg agctgcaggc cagctccatc c
//
LOCUS       KCPA01001054             760 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 115580tic ultra-conserved element locus
            uce-1776, sequence.
ACCESSION   KCPA01001054
VERSION     KCPA01001054.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 760)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 760)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..760
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="115580tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>760
                     /note="ultra-conserved element locus uce-1776"
BASE COUNT          223 a          151 c          148 g          238 t
ORIGIN      
        1 aaagttgtgc cctgatttct gctcccttta ttcacctgtg caagcaggga ctccatttcc
       61 ctgctgctgg aactcacctt catctccttc catccataat taaagctgac ttatcttatg
      121 tgggccattc acctatttag cctccaaaaa tagctgagag gtttacagga aggaagcagt
      181 taaatgataa aaatgtgaaa tgttatgtag caagctgtgt acaattaact agaattcaaa
      241 tatacacctt gttccaatcc aagccattta tgagataaaa atagtctgct agaagaatgt
      301 catgattaat gaggtgagac tccagctaat tactgtttcc tcctgaagta attaggttgg
      361 cattgctaat caagatgaat gaacactctg acccgcttct ttaaatgtaa aactatgagc
      421 tgcagcagca ataacatcat ttagttcagg caatgtagtc tttattaggc ttgtagtttg
      481 attaaattct tttgttatac caggctttcc acacatgaac agatgaatgc tgtgatgttc
      541 aaagagtttg tcacccttaa ttaaagactg aaaaagcttg ttcagttcat ggggcagtac
      601 acaggacagc tctaaattga tagcttttaa gtgcggtgag ggagtcgtag gatttaccac
      661 ctgcaagagg atccctcctc cttccatggc tttctgtcga gctgggaaat tggtatcaga
      721 tatttgtatt gattccatta ggcacactca tttcatcaga
//
LOCUS       KCPA01001055             538 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 115683tic ultra-conserved element locus
            uce-1570, sequence.
ACCESSION   KCPA01001055
VERSION     KCPA01001055.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 538)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 538)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..538
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="115683tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>538
                     /note="ultra-conserved element locus uce-1570"
BASE COUNT          182 a           88 c           87 g          181 t
ORIGIN      
        1 gttttagtag ttgcaaggga ttatagactt tgtacagaca ttaaatgtca ccaatattac
       61 tgaatgcaaa gttaaaacag ctaagaaatg cctttagaat agcagttgtg aaatttatat
      121 gaatttctat tatatgacaa aatgaatcta tttttttaaa caaaggacag tcagtctgag
      181 atttacacct gatttgtgct atagtaatct ttgaaattaa gaagtgtatc cttgcatttc
      241 attaaattct ggctaatgag ataactgtct tcccaaggag ggagtgatga agtactcatg
      301 ccataaagca taaattaatg ctgcaaggtt aaacactgga actaactcat gtttcaacaa
      361 aagcccctac cagcagttaa attaactgac ataaatacca taaaatctgt ctttatttta
      421 gtctcagatg atgcttcttt ttacacccct gctttcagtt tgtataactc atttttgcac
      481 attattgcat gcatcatttg ccatttaaag gatcagcttc aactgagaga tttaagga
//
LOCUS       KCPA01001056             466 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 115789tic ultra-conserved element locus
            uce-3499, sequence.
ACCESSION   KCPA01001056
VERSION     KCPA01001056.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 466)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 466)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="115789tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>466
                     /note="ultra-conserved element locus uce-3499"
BASE COUNT          162 a          103 c          113 g           88 t
ORIGIN      
        1 cagatttcgt tgggggaggg tgaatgaagt gaagcaagct acaaaagcca cagggcaggc
       61 aggactgagg acggaagaaa acgggacctt gtgagacatt ttggtcatgc caggatggag
      121 gacatgcagt attagaaatg cagaattccc cccactcact tgtgatatca taaacaacaa
      181 ctgcaacagt ggagtcacga atgtagctag gaatcaagct cctgaaccgc tcttgacctg
      241 ctgtgtccca taattgcaac cgtacctaac aaaatcagtc aaacaagcaa gaaaaataag
      301 aaaaaaggtc aaaaaaatac ctacttgtga tatcgtaaac tactacagca gcagcagagt
      361 cacggatgta actgggaatg aggctacgga aacgttcctg acccgcagta tcccacagct
      421 gcaacctgat ctgtgggcgg gagaataaaa aagccaaact gccact
//
LOCUS       KCPA01001057             875 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 115902tic ultra-conserved element locus
            uce-2147, sequence.
ACCESSION   KCPA01001057
VERSION     KCPA01001057.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 875)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 875)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..875
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="115902tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>875
                     /note="ultra-conserved element locus uce-2147"
BASE COUNT          281 a          148 c          178 g          268 t
ORIGIN      
        1 aaaattctaa agggaaatct acggaggcta catgtcagat gtttctctct tcttttctct
       61 ccctctcttt ttatgcacac aacacccata tgcacatgca catatattaa tatatataat
      121 atatgcagat attgatggaa ttctatgagt tgaaagagag ggaagatgtc tttaaggatc
      181 catatctctt gcagcagata tatgttatta tcactgaaat gtggccttca gtcttgaaac
      241 agttaaaaga gttctacggc cacaaaagaa gagatttctt cagaattatc tcccgcctca
      301 catttgctct taggcaagca gtttaaaaaa gcccagtgat tgagccagtg atccaatttg
      361 aaatgcagaa atgattagag ctgcttgcct catttcatat cgaaattctc tgatttatga
      421 cagggctgca gccaagatct atctccaaag ggaattagtg tgcaagtttg catatttttg
      481 ttatttaggt ttctgatagc agctgctagc tagaaatact gaactgggag gtggtggtgc
      541 agggtttttc agccattgga gcaaagaaag ataagagcct tatgtttagg acatttagac
      601 cccttgacca tctcaccata cagtaatttt taaacttgga ttgcagtaat acaggaatcc
      661 agcggtatgg ttaattgtag ttggggagaa aggaattacc aaaattctgt ctccatgttt
      721 taactagggg aattttaatg aggcataaaa cttcaatcat gcgactgacc tgtggggcag
      781 agtgtagaac atataatgaa acagaaatag aattctgaaa aaaaattatt accttatctg
      841 gaatttacat gaagtgttaa caggaaatta tgcag
//
LOCUS       KCPA01001058             614 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 116012tic ultra-conserved element locus
            uce-2843, sequence.
ACCESSION   KCPA01001058
VERSION     KCPA01001058.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 614)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 614)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..614
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="116012tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>614
                     /note="ultra-conserved element locus uce-2843"
BASE COUNT          189 a           98 c          115 g          212 t
ORIGIN      
        1 tttttttttg aggtgtaagg caagaatgtg tgttttccat gggctaaaca aatcaggctc
       61 taaactttta tctagatctg tggagcttgg atataaattg aaaagatcac agctgtgggg
      121 aaaagaccta tactgtaaag gcctttctgc atagattatg aacatcataa ctcaataatt
      181 tctttttcca aactatagtt ataattggac ccaatggggg tctctctctt tgatcagatc
      241 acagtaactg tgactttaca ctggaaaatg tcactactat gaaggtttat cacctgtaga
      301 gctggtcttt tctctgatgc catgttcagt tctcattagc attattcaaa gtttagttgt
      361 taattaggtt gacacttcaa ttacaatcat catctacaag agcagttagg actgcttgca
      421 taaagaaaca aaaacttcgt gcattatttc caaaatgaaa gctgttttgg tgataaattt
      481 gtatttataa tattccattt aaatagtaac tcggaatgtt atttagggac ttaaataatg
      541 ctctacaagg ggacatagaa acgtgtattc tgtgtaaata gagttgactt atttccaggt
      601 gtccctcatg atgg
//
LOCUS       KCPA01001059             705 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 116121tic ultra-conserved element locus
            uce-627, sequence.
ACCESSION   KCPA01001059
VERSION     KCPA01001059.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 705)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 705)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="116121tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>705
                     /note="ultra-conserved element locus uce-627"
BASE COUNT          211 a          132 c          141 g          221 t
ORIGIN      
        1 tgctctgtta gaaaaacatc gtatttctga ggctggggtt gaatgtatga taactctgtg
       61 tttattgtat gtcacttttt aaaatttcat ttttatattg atcacacttc ccatatgttt
      121 ccaattgcat aattctggct cagaatggaa gagatatgac aaatggacat ttatacatct
      181 gtgataaaaa gacagagcaa acagccagta atttacatat ctgctgaaat actgcagact
      241 ggctttgtca gtgctgctga gtccatttca aggatgtcgc ccttagtcca ttagtttgga
      301 taatgagccc tataaagtac atttataact cgtggcactg caaggagatg gattctaatt
      361 ttcatccttt tatccagaca cattgaaaga aggtcaatgg agggttcgct gtgattcatt
      421 gtcgcaacac agatcagatg acagagacct gataatgtca gtgcaggagt gtttgctgca
      481 tgtggaagca ctacttgaaa gaaattttct cagcatcacc ctttgaagta aagtgggaaa
      541 ttaaaagctc tctctctcgg tttaaaatct tatcacacat atgacctgct gctattcctg
      601 aacaaaggag aggaaacaac acttagcagg aaaatagtgt cgttgctttc gctggctttg
      661 agtgatgcaa catgacattt aatcaacctt tccccttcca taatg
//
LOCUS       KCPA01001060             472 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 116232tic ultra-conserved element locus
            uce-5968, sequence.
ACCESSION   KCPA01001060
VERSION     KCPA01001060.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 472)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 472)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="116232tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>472
                     /note="ultra-conserved element locus uce-5968"
BASE COUNT          167 a           89 c           79 g          137 t
ORIGIN      
        1 agaatttctg ttaaatgtat atgtatgttt aattgagctg ggaaagccaa gtttagtaaa
       61 actgcaggca ttcccaaagc tttaaaatat gaacgggcat ttggttaacc agctgtggtg
      121 ttgcaaatct catgtacact caaagcactt ctcagaaaca agaactgcag aactaaacta
      181 acctcggtct gcggtcacaa tcctttggta aggatggaca cgcatatcgt gccttcgaac
      241 tttagtagcc accgcaccta gttaaattgc aattaccaag acaaaacatt cacagaaaac
      301 attaacagca ggtttatcaa aatggattta aatgatcatt aactacaaaa gttcaaaaag
      361 caacaagtta aggcacagta gtttcaaatc ttaatcttaa aaagaagttt atctgtgcag
      421 attaatattg catttatttt aaacatcctg gccttaacct gtttaatcca tt
//
LOCUS       KCPA01001061             565 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 116337tic ultra-conserved element locus
            uce-4899, sequence.
ACCESSION   KCPA01001061
VERSION     KCPA01001061.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 565)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 565)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..565
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="116337tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>565
                     /note="ultra-conserved element locus uce-4899"
BASE COUNT          182 a           86 c          122 g          175 t
ORIGIN      
        1 aagtgagcat gttctgcata ggcaccagtg gagctggcaa agaattcctt tagttaaagc
       61 aggcatatac tgaattttga actacctttt aaatacttaa attgtcaagc aagcgttttg
      121 caaaggaagg gttttcagta tataattccc caatgtaggt caattaaagc tataacactt
      181 tcctaaattt gaatcactag atcaagtgag ttgtacattt tccctctgtg catttatttc
      241 aaatgttaat aaagttttca tctacaaaag gcttagaatt gacagaacaa aactctttct
      301 ttttaaatga tgacaactac tactgtttct gtctgcaggt agtggaggac atgctagagg
      361 acgaggaaga agaggatgac agagatgaca aggtaattat ctttcctagc acttgggtat
      421 ctggggatgg gagaatttag acatgacact atttttaccg acagttaaaa aaggagttga
      481 tgtgttttag tccagaaaat tggacagagc tgtttatcat ccgccatagt gtgttaaggg
      541 aaaggttaga ggtttagaaa tcctg
//
LOCUS       KCPA01001062             624 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 116448tic ultra-conserved element locus
            uce-4400, sequence.
ACCESSION   KCPA01001062
VERSION     KCPA01001062.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 624)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 624)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="116448tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>624
                     /note="ultra-conserved element locus uce-4400"
BASE COUNT          195 a           94 c          121 g          214 t
ORIGIN      
        1 aaaaatagaa ccaaatatga tgataatcag gttgtactgc tgctgttgac tttctgcttt
       61 cagatttatt tactgctagt tagagttgct aattctgtag atgcttcatt ctgctgtaca
      121 aggaggttaa tctacaatta aacaatattt cctcttggtc ctccattatt ttctgaaaca
      181 gatggttcat catttcctgg gctgttaaac acagcaaggt taaggttaga ctcttgggaa
      241 tcagctagtt tggaatctta ttaggctgtg gaaggaaaac taataagaat actccttaat
      301 atcattttgt gactgtaaac aattatttat tagcaaacaa ttgatcccag aagggcaaat
      361 tgtttgagtc agtaatgagc tgagaaaaga cagagcatat ctgtgtattt ggaaaataat
      421 tgtaacgtaa ttgcaatgca tttagacagg catctttttg gacctgtttc tatctttaaa
      481 tgaatttctg aaaacattaa cgaggtttat atgcttttct gacatttaca agttgcttgt
      541 gccaaccggg cactaagaat gatgggtata tagtgtgagt catctctggt ttattctaaa
      601 aataagttac ttaggacaga agac
//
LOCUS       KCPA01001063             548 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 116551tic ultra-conserved element locus
            uce-3067, sequence.
ACCESSION   KCPA01001063
VERSION     KCPA01001063.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 548)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 548)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..548
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="116551tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>548
                     /note="ultra-conserved element locus uce-3067"
BASE COUNT          140 a          130 c          128 g          150 t
ORIGIN      
        1 gccccagtag aagtaattgg acaaagatta aattgaatgg caggggcttt gtgtaccgaa
       61 caggggcttg tctttgtctt tacaaagtat ccggcaccgg gtgtcaggga ggacaagttt
      121 tttaatcatg ttaaaatgat ttatttaaac gtcaagccat gtcacctcac ttcctttcat
      181 ttttcaaact gtttgtgttt tttctggatg ataaatttat cttcagacag cctcaatatg
      241 actaattaac tttgaaatat aagaaccaga tgtgtgagct ggagagcttt ctgaactcgt
      301 gccaggccct ctcctctccc aacaaaattg ctctgcagac actcggggca catggaaaaa
      361 gcagacggat ggaccctctg ccccctcctc ccccagccca gggggtgttt gctgcccagg
      421 atggtcctgc cctggcctgc cgggaggaca cgggatgtgg gaaccaagct gccactgttc
      481 ctttgccaca tgaaatcaag gctggatgtg acacaaagtg atttctttga aagaaaatcc
      541 tgccctgt
//
LOCUS       KCPA01001064             553 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 116665tic ultra-conserved element locus
            uce-866, sequence.
ACCESSION   KCPA01001064
VERSION     KCPA01001064.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 553)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 553)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..553
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="116665tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>553
                     /note="ultra-conserved element locus uce-866"
BASE COUNT          160 a          126 c           83 g          184 t
ORIGIN      
        1 cccagcactt cagttgcatg tacacaaaat aaatgttaat aaaaaagact gaatgaaaac
       61 tttcattaat ttttctgtct atgatctgat tccaagttaa aatatctaga atgctactag
      121 gtttatgtag ccgaaagcag aaccacagtt tgttcacaga cgttgcttgc tgcctgcaat
      181 tttttcatcc ctttacaaaa ctttgaaccc catccagctt tgacacactg catcttcagt
      241 taataactat caagtttccc cttgtctcct gtctactttt ctttgaggca attgcgcact
      301 cagcacccag agataataac acacatctat aagataaaag caatggcatt aatgtaattg
      361 tctgcctttc tctctttagc ctaatctttt ttttccttca gttttgactg cctctgtgac
      421 acctgttttt gtctcctctg atcctacgac aggttttccg ctgacaaggt tttgacagag
      481 attctgccag acaagaacat aataaaatat gaagaactgc ttgtcagagt ttctgccaat
      541 gctcacatga aat
//
LOCUS       KCPA01001065             655 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 116774tic ultra-conserved element locus
            uce-2151, sequence.
ACCESSION   KCPA01001065
VERSION     KCPA01001065.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 655)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 655)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..655
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="116774tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>655
                     /note="ultra-conserved element locus uce-2151"
BASE COUNT          192 a          139 c          119 g          205 t
ORIGIN      
        1 tactctacct ctaaaaatat ttcagccatt gatgtgtttt gtgtttcacg atacatcatg
       61 tgttttcccg gcgagcagct cgacgtttta atacaattac tgttttgcaa tctgagccct
      121 tcggatcctg gtacatgcac cacagctgca gatggatttt tttattgact taatactagt
      181 tctaactaga tcccaaagat taagttggtg gagcacatag cactttcaag caggaacggg
      241 aaaaatctag catatcttat tgtacctgaa acactctatg atatgtacta aatattatga
      301 ctactgcgag ccctgcaata attgattcac ccacacagcc atttagtctg tgagctgttc
      361 gttttacaaa ttctacaatc ttttagaaat tctttcagtg aagaagattg ctgcctggcc
      421 tcagattcat tatggtgatt gaatcctctt caatagagaa ctgtttaaag agagcacatc
      481 cctgtgtgtc tcactcagag tgaaggcaca taggttaaaa gcttgtctgg gtggcataat
      541 tcactgctgc tgtgccaaac aatcacatct tattgtgacc ttcataagat acaaaaaggc
      601 aacagtatgg agctagtctt taaccacagc acaattttag ctacccaaca tctga
//
LOCUS       KCPA01001066             576 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 116885tic ultra-conserved element locus
            uce-1842, sequence.
ACCESSION   KCPA01001066
VERSION     KCPA01001066.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 576)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 576)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="116885tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>576
                     /note="ultra-conserved element locus uce-1842"
BASE COUNT          175 a          123 c           94 g          184 t
ORIGIN      
        1 aactctgtag gtcccgacta tcccagacaa tgcagtcaaa ggtgtaacac aatttggatt
       61 tccccctctg cagctttcct gtgtgcagag acacagttac cagtctgtct tcagaaggac
      121 tcctaccatt ctaaaaatac tgtcccacag ctgtttaaaa tttatttttt tagaccatag
      181 caccactgtt tggttgtttc caatttctga aaccacaaat agtaaaagtg tactcagtct
      241 actgcaaaca taaatagcaa atgcacgctt cagcactttt aaaaggatat ggaaattggc
      301 aacaaaaatg cagttcatgt tgaaaattta cgagggccct gccatatttc ttcagaaata
      361 caatcaggta aaaattagga agatctctac cagctgggtg gcatttttgt gttttcttta
      421 cttataaact gaaagacttt cattatgcaa cttctggcac ttgataaaat agagcatggt
      481 acctttgctc aaaccacagc ttctttggtt atgtttagca ttacacaaac atctttcacc
      541 ttagatatcc tcttgcatta gtgtgtttca tttcaa
//
LOCUS       KCPA01001067            1036 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 116995tic ultra-conserved element locus
            uce-200, sequence.
ACCESSION   KCPA01001067
VERSION     KCPA01001067.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 1036)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1036)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1036
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="116995tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>1036
                     /note="ultra-conserved element locus uce-200"
BASE COUNT          298 a          209 c          200 g          329 t
ORIGIN      
        1 aaaagattag ttaaaacatc tctaaccccc agtgtccctg ttttaaatta ttgtgattag
       61 attatgtaca gcgcttaacg ttgtacataa agatgtgccc ccatctcctc tcgtactggt
      121 gctactgtgg gaatttgtta attcagcttt ccaagggcta ttgtgaggat agtcacaatg
      181 tatacacatg ttaaagagaa tatatatatt ttgcacaaaa tcgttgcact gcataaaata
      241 tgtaagtaaa ttctagtgtt aagatatttc cacattatga tttattccat tatcattttt
      301 tccatctcag aatgcaatta atatggttgt gtgttaaatg attcagtgaa agtaaatctt
      361 ttatattcag gtaagcaatt cagccttgta aggttttatg ggaattagat tttttgaagt
      421 ctgtgttgag catgcccata actctgacag agccctgcag gctcttgtct tcaccttcaa
      481 atcataagac agagaaatca agctccctct gtgctctcaa ttataccaaa aaacacggag
      541 cagaagtctt cagtaattca atccctgtgg aagcttcttc atactgtttg cactgttgga
      601 actgctgaca gcagcaatcc cacaatccct cctggtaggc tgtcaaagtt cctcgtgccg
      661 tgtgagcggc actgctctgt cccaccgctc ctcctccaga gacctttaag cacatgcatg
      721 acttttgatg cttgctcgat acagtggcca agaggccaaa aaacatcaca aggagagttc
      781 tcatactctt acaaggtgct ttgtactcaa actaatagga tctgtggcta catgtgggcc
      841 agggctggtg taatttaatc acaagtacag ctgcataaac actgtactaa ggaatgtctg
      901 cctgcaattg gattctttct ttgaaagtgc actgtagaaa attcctgagt gccattttcc
      961 atatggttaa tgaggaaatg tatcatggcc agcttttaaa agtaatttga atttatgagt
     1021 tgcggtgatt ctaaca
//
LOCUS       KCPA01001068             555 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 117105tic ultra-conserved element locus
            uce-5288, sequence.
ACCESSION   KCPA01001068
VERSION     KCPA01001068.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 555)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 555)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="117105tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>555
                     /note="ultra-conserved element locus uce-5288"
BASE COUNT          160 a          109 c           94 g          192 t
ORIGIN      
        1 agctaaaatg caagagctct aagtaaatag ctccttaccc atcatcagtc cagcaagagc
       61 actccttgta gcagcgagca gttgaaaaaa ttcctaaccc acaaaatgat atagaatgtg
      121 ttgttctcct gaatgctctt tcacagtgtg atcaagaggc tttcgtttag tgaatacatt
      181 tgctcactca gttttggaga gtcgcccttc atttattctt tccctttgga agtactttcg
      241 agtgcaaatt actgctatca gaagccttga actgagaggc tattattctc catgctcaga
      301 ttaaattaat tttgaacagt ttaatgcagc atgtccgagc tgcaagtcca aatggtgtca
      361 aatctatttc tctgcttttt taagctgcac cttcaagggc agtatgattc atggtaaatg
      421 tgttcttcta atgtcttttg ctaggcatta ttattttctt tgcaagtcat gaggataaaa
      481 tgttaactat tttcctccta aaattatata aagaatgcac aattttatac ccacctaaga
      541 ttattatatt tgctt
//
LOCUS       KCPA01001069             440 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 117211tic ultra-conserved element locus
            uce-5108, sequence.
ACCESSION   KCPA01001069
VERSION     KCPA01001069.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 440)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 440)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="117211tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>440
                     /note="ultra-conserved element locus uce-5108"
BASE COUNT          166 a           70 c           51 g          153 t
ORIGIN      
        1 gaattaaact taacaaatag atctttcaaa aactaaatta ataaacttcc ttatttctcc
       61 actatcaagt tcatagcctt tacttaatga tgatgcactt gattaaataa aatgaaagaa
      121 aaatggaact tctttcagac attgaaatta ataatgagtt tagacttaat ccaaaagcaa
      181 tttaaattta aacattcata tcaaattaaa tgtgccattg aatttgctat ataagcaagc
      241 attaatctta tcaatctatg aagactggaa tgtaatacag tgacccatta atttcaaagc
      301 ctaatacaag gtctgtttaa tgcctttagt ctattaaaaa gtgtgatcct acaatataac
      361 tgctttttca taaacgttta aaccccaatt cattctgtta ctgcgatcat ttgataatct
      421 gttctgacaa gattatggtt
//
LOCUS       KCPA01001070             830 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 117321tic ultra-conserved element locus
            uce-4666, sequence.
ACCESSION   KCPA01001070
VERSION     KCPA01001070.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 830)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 830)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..830
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="117321tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>830
                     /note="ultra-conserved element locus uce-4666"
BASE COUNT          266 a          122 c          161 g          281 t
ORIGIN      
        1 agccctgcca ttggcaaatg ctataatgtt tcccctcact attaattgtt ctctgtttac
       61 tttgatgctc aaagattgcc ctgttttaca agcatatttt cttaattgtg tcaccttgta
      121 ctgtaagtgt gtcagagggg aaacatttgc aagtgattag atatggacct ttgtgtcacc
      181 aaatgtatga ggtacatacc cttataggat ataattgtga tcttttaata tgcggccatt
      241 gacccggact tgttattatc tattatagtt tataataatg tatctcttta tgattaaatg
      301 atgatgcctg gcagaacact atgattagca tttcagttat ttatagatta tgtcagagca
      361 gtaataaaca taaaatgctg ttaatgtgtg gctaatgaaa tctggacatg aacaagttta
      421 tgaattgata taattcattt gagtgttcta actgagctgc tggttctcgt cataattcaa
      481 aagcttagca gggttcaccg attaggtggt agactaattt gctacaaaaa gtcaatgggt
      541 tttcatcgtc ttgggctatc atacacagca tggctgattg cataaggact atacaaagta
      601 attctcataa atatatttat taagcttaat atgttttgtg aggttaggat ggaatcagcc
      661 agtgcacaac atatgtggaa caaaatcaca gtgtgttaga tactaaaaag atatgttcag
      721 taaaatcatt caggagcgga tcgatgaggg agttatttga attttaaaaa gcgagcaatt
      781 caatatcaaa tataaatgag agccataaag aatgatacat atgattgact
//
LOCUS       KCPA01001071             729 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 117431tic ultra-conserved element locus
            uce-322, sequence.
ACCESSION   KCPA01001071
VERSION     KCPA01001071.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 729)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 729)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..729
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="117431tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>729
                     /note="ultra-conserved element locus uce-322"
BASE COUNT          200 a          160 c          155 g          214 t
ORIGIN      
        1 tttgctgctc ctgcttctcc acaggcacat cagggtcctc ccagcacctt ccctgggtag
       61 ggggcttggg aggagacacc caaaaaatac aggattaatg aaggtaaata aaaatataca
      121 gcacaggtac tctgcctttg ttcgcttgtt attttcacca tgtctgaggg aaagcttata
      181 aatgctctgc tcgggcttct ttatggaaaa gctggaatga aacaacacag agtacaagca
      241 gaagtttcag actcactgga tgtctctttc tgtcagatgc cacagtgtca ggctcaaagc
      301 catttgtcat ccctgaattt cattatctgc tccttccctg tctttcagtc tcactttgct
      361 aggacatttg ttcaccgttg acctccctga caaataatac accttaatta tgttggcaag
      421 aggggatatg tcattcctgg gccactttaa ttgtctatcc gacaggcatc ctgctgcggc
      481 gtgtagcttc catggtattt tgaccacgat tgcatttctg tgggcttacc gtaacatcac
      541 ttagtgattt ctttgaacaa tgttctctta tgtttttaca agggtggtgt gaaatgagga
      601 aagggtgtaa aacagtgcaa caactaggtc tttgtgtagg ataaatattg aaataactac
      661 acaactgaga ctaagcagga ggatctctga acataccttt ggaaaacaaa tataaagccc
      721 tgagccaaa
//
LOCUS       KCPA01001072             690 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 117540tic ultra-conserved element locus
            uce-1877, sequence.
ACCESSION   KCPA01001072
VERSION     KCPA01001072.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 690)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 690)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..690
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="117540tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>690
                     /note="ultra-conserved element locus uce-1877"
BASE COUNT          208 a          135 c          125 g          222 t
ORIGIN      
        1 actttgaccc agaagcaatt cgagacttga ttttgcagct ggactacccc tacactcagg
       61 gctcacagga ctcagcactt ttgcagctgt tggagattcg ggatcgtgta aataaactct
      121 ctccacctgg ccaacgtcgt ctggacctct tctcttgctt gctccgtcat agactcaaac
      181 tgtctaccag tgaagtggtg aggatccaat ctgctttgca ggcctttaat gccaaattgc
      241 caaacacagt ggattatgac acaaccaaat tatgtagtta accataaatg tgaagcacaa
      301 cacaaaacct tgaaggagtt tttacagtgc ttttgtggaa cagtttatgt ttggaagagt
      361 aaatttaaat tgtcttttca atatctgtct tatatcagtc aatactgttg gatggcaatt
      421 tacacacatg aacttgctga caatatatta tacctgcagt tttggtttat gaatgaaata
      481 aatactgaca ccagtctaga agacattcta ctttttacaa taaatttcat ttgtaatttt
      541 atatgttcca tggcaatgct tttgtgcatt acatcctcta gagggaacat agaaggagac
      601 caataaaatt ttgtagctga acagttatta caaagaaatg ctgtgggatc cttttttctt
      661 acacaaaagt agtaactttg atacactttt
//
LOCUS       KCPA01001073             641 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 117647tic ultra-conserved element locus
            uce-6102, sequence.
ACCESSION   KCPA01001073
VERSION     KCPA01001073.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 641)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 641)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..641
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="117647tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>641
                     /note="ultra-conserved element locus uce-6102"
BASE COUNT          212 a          114 c          125 g          190 t
ORIGIN      
        1 agttcagtgc agaaattaat atcaagtgtc agctaactct accttcatat agagagtggg
       61 atgaagaatt tgactacacc tgcatagaaa gggctcccag aatggtagtg gcacactccc
      121 aacatctgct ccttccattg aacttagctg taaattgaaa ttccattgca atgtttttag
      181 aatcagttga agtaaggaga ctgtcagaaa tcctctttaa actcaccctt atccaaacag
      241 gaagctgacc tctaaccccc ggacgtaaca gtacaccagt ggaaatttca ttatccccgt
      301 ttcggctgta ctaagtgaaa attaattgtg taattatctg gatgagcgca tgtgtaaaat
      361 tttacaatgt gccagttaga ttaagtaacg tgttagtggc atggtttagt gcagagtcaa
      421 ggctgtcttg taaaaatggc gtaagaagtc caactagatt tgaaggaaaa gaacatatgt
      481 ctgaacaaac tttaacgtga gaggtaatgt agtatttaat accataactt gagtaagatc
      541 ttaacctcct ctgatggaaa tttatctggc atagaagaga tcttttgtct atcactttaa
      601 acccacttag tttaacggtg aaaatatgat taaaatatta a
//
LOCUS       KCPA01001074             702 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 117756tic ultra-conserved element locus
            uce-544, sequence.
ACCESSION   KCPA01001074
VERSION     KCPA01001074.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 702)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 702)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="117756tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>702
                     /note="ultra-conserved element locus uce-544"
BASE COUNT          219 a          105 c          125 g          253 t
ORIGIN      
        1 tttttcaggg actgttgtaa taagtctaaa atttcattta actgaaattt aagatttaga
       61 agataagtac tgttcagttg actaatcaaa tagtcataaa agctcttttc tgaactataa
      121 ttgcatttat tcagttctgg gtttgattta ttttttattt taattgtcag ctctgctaca
      181 ccatgatgct aatagaaatg ttattgcagc caatatgggc taaaatgatg tctgatgatt
      241 attaatgaga gcaataagaa ggtatcttca tataaagtca gcattaaagg agtaattcat
      301 ttcacctgat ataattggat tgtagcattg aaatagcctg ggacttcctc ttaattgtga
      361 ttagttgtag cttcctcctt ttagtactgc atttaactct tcctccacta cgacttgtgt
      421 ttcttctatg aagtaattaa acatgaattg ctcagtgcct tttaataaat acatccaagg
      481 atttagtagc tgttaactgg aatagctgct tgttagaaat agttatgcac agtacccata
      541 gctggagatg tgaagctatc acttcactat aatattttat atggcacatc attatacaaa
      601 tgcatcaatt gttgctttgg ttgcaagaat cacagcaggt gcctttgtca ggagcaattg
      661 taaagctgaa ttttatgaga atcaaatgaa aggagggtca tt
//
LOCUS       KCPA01001075             616 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 117863tic ultra-conserved element locus
            uce-998, sequence.
ACCESSION   KCPA01001075
VERSION     KCPA01001075.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 616)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 616)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="117863tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>616
                     /note="ultra-conserved element locus uce-998"
BASE COUNT          198 a          124 c          106 g          188 t
ORIGIN      
        1 ctattttaat tttaaagtaa gttagcaaat acttcgttcc taatccctga ggactatctg
       61 tatggtgaca caaatgcaca aatttatgac agtaacataa aagctcctct gaagtaatgt
      121 gcaacattaa gtaaaatagt tttctggaaa gatattatag atatctatat tttatttaaa
      181 catatctgtg tctttatgac cttattttta aaatgtattt cctttttaca tttcctggtg
      241 caaatggact gcataaataa gcaatgtgct atgaggcttc agactagccg ataaaccctt
      301 tcaattttca tgccagcttc ttcttttgta attcaaatct ggctgaaaac tggcagctct
      361 gaaaactgaa acaagcactg ccacaaatac cttgtaatgc tatcgacctt gtctgcccat
      421 gcagtgagaa agggggatgc atatgtgtct gcagtcatcc agataacaca actcattttt
      481 ttggggggat aacagaagct ggaaccggac cgcgcaccca aagcagtcat taccaggcag
      541 gctggagaat aagtctcttt aaaatacaca gcacatttaa aaaccatata cagagctcag
      601 ccactgcttt cattac
//
LOCUS       KCPA01001076             551 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 117973tic ultra-conserved element locus
            uce-931, sequence.
ACCESSION   KCPA01001076
VERSION     KCPA01001076.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 551)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 551)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="117973tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>551
                     /note="ultra-conserved element locus uce-931"
BASE COUNT          175 a          107 c          104 g          165 t
ORIGIN      
        1 aacttgaaaa ccatattaat aattaagacc tagatcctga gtgaatcaaa cccctctttc
       61 tctcaatagt tcactatttg aaagatgttc ctggctgaca acaacagaaa aatctcacta
      121 agaataggaa gttgctgcag gaatgaaact ccctttctgg ctaggagggc tatgttttcc
      181 tatgcaaatg cagcaaagcc cagaaattag caatgactgc taaattaaca cacttgaaga
      241 gcttggctgg tcctaatagg cagtcaaatg gtcttgttac attgtaatgg tgccaagcta
      301 attgaagtga ttactgttgc tcatgagcag cccttttgaa gtagaagtct tttaaattat
      361 ccatagacgt taaatgtcag acactattgt gtaattatac tttgtaaacg ctgaatgtca
      421 taaggcatca caggtaattg aggtttacag agaagagctt tatctaaacc taattgggca
      481 tcaactcttt gtcactattt ctaaacctaa ttgggcatca aatttttgtg ctgggggcac
      541 tccaacacct c
//
LOCUS       KCPA01001077             532 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 118081tic ultra-conserved element locus
            uce-7607, sequence.
ACCESSION   KCPA01001077
VERSION     KCPA01001077.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 532)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 532)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="118081tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>532
                     /note="ultra-conserved element locus uce-7607"
BASE COUNT          154 a          116 c           89 g          173 t
ORIGIN      
        1 tacagaaggc agccctctca ttctgtctcc catgccttaa ctgaattttc tggcatttca
       61 tggccattac tgtagatttg ttttacatga tcaggaaaca aatatgtgtt atgccttaaa
      121 tattacataa gcagggaagg attacagtaa ttttacatac tctggtttct aataaatttt
      181 cacagctact ctaaactgca ttagcaagtt gcagtttatt gtcaaacttg tgtacaacat
      241 cccttagtga catgtcaaat ctttaccaag gcagctgaac tcctaaagct ggcctcattg
      301 gcagcaaact tgtcagatta aattgcctcc tcctgtcagg taaagatgca tgatccgata
      361 tccccctgtc gctgatgaca caaacagtcc tttcactttg gatgtatctt gaatctccag
      421 tgtttcttcc tatgagcaga gattaagagg aaatattcca ccactttcag cttattttac
      481 tataaatgga gacacagaaa cacttttgtt cagtcacagg gtattcactt at
//
LOCUS       KCPA01001078             582 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 118192tic ultra-conserved element locus
            uce-5853, sequence.
ACCESSION   KCPA01001078
VERSION     KCPA01001078.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 582)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 582)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="118192tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>582
                     /note="ultra-conserved element locus uce-5853"
BASE COUNT          152 a          135 c          107 g          188 t
ORIGIN      
        1 aggagggaca tttcggtagc tgcttcttca gctccctcat gtcaccttgc cccctccctg
       61 ctccccagca caggggccct gtgaactcct ggccatggga gccaactcca tcacagaggg
      121 actctcctga catgttttca cagcatggaa cccatttcac acccccctct ccttcaggtt
      181 tccatcccct tgggcctaag taacactact gcggcactga cttcaataag taacttttta
      241 ttgtgcctaa tcatgtgcaa atgtgttaaa attggtagtt tttagcaaac agttatggaa
      301 catattaccg taaggcattt gttcatggcg tgacaatgat tggctccatg ccacttaaat
      361 gttttattta ataatgtggg aatttcagtg tgttttcctt tcattatttt taacttgaaa
      421 acagaaacag aaagcccctt ctttaaagtt aaaactttac cgcctagact ctgtcaaaag
      481 caatataagc atctggattt taaaaaggga gcttttgcag gatgttaatt taatatactg
      541 gcatatttca tgcatacttt ttatattttg tatgcttgga gc
//
LOCUS       KCPA01001079             648 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 118304tic ultra-conserved element locus
            uce-1713, sequence.
ACCESSION   KCPA01001079
VERSION     KCPA01001079.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 648)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 648)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..648
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="118304tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>648
                     /note="ultra-conserved element locus uce-1713"
BASE COUNT          178 a          131 c          137 g          202 t
ORIGIN      
        1 cacaaaaacc atccagcgtc cttgtcagaa aaaatcagct tgagttgcag ctgacagaat
       61 gcagagcttg cagtgcacct agtactgtta acagcaatgg aagcctcctg caggaggaaa
      121 acgtatttct tctggggtgg cacttagaat ttaaaaaagc gtgatctggg gttctcatta
      181 gagcttcagt ggttatcagt aacccataag ccttgttttg ctggctgctt actggtgcat
      241 ttaataaaat aaagatcact cagtggtgcc gtgggcagca tgcaaggtga tagccatatt
      301 tgcttactgt aaatacaaga gaaaatcaca cacaaaccgg ctgtagtttt gacaagtatt
      361 aagatcgctc tttacatctg tacttctgta ccaaagtgca attagttttc ctcgcacaag
      421 gatttctgtt tatcttattc tgcttgatta cttgagcata atcgcaccgt ttgcttcact
      481 gctcctggta gtaagctcca gtttaaaaag gggaggatga gtgtgtgtaa atatacagaa
      541 ttctgctgta agactaattt atgcatctgg atgacagcgt tttcttctcc tttactcttt
      601 ctttccacaa ggtttggttc atgtacatca gattcctcgg cttaatag
//
LOCUS       KCPA01001080             695 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 118412tic ultra-conserved element locus
            uce-2811, sequence.
ACCESSION   KCPA01001080
VERSION     KCPA01001080.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 695)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 695)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..695
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="118412tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>695
                     /note="ultra-conserved element locus uce-2811"
BASE COUNT          224 a          145 c          123 g          203 t
ORIGIN      
        1 tgactaattc ttgttacttc ccgaagaatt cgagcaccct tatcattcaa atactgataa
       61 tttattttta atgtagcttc tttacactgg ctgaatgatc ttttgatgct gctagatgct
      121 tcatattcct tcaatatatg aagaatggca ggactgaggg cctcagacaa cgtaaactaa
      181 atgtcagttg ttctttcaag ctactacttc tgccaatcct tgttcctggt atttattttt
      241 cttttgtgtt taccctacag ggctctatga aaactatcca accaatgcag aaccagaatg
      301 ctgtgatgtc agatggggac tattatcaga tcatcaaccc aaagggacta taaaaacaag
      361 tggctcaaca atgtgtcaca ggacatcgct cacagtttca tcagcatcaa gactgtgtaa
      421 cagcagactt aaactgtgtg ttcttgtatt aattctctta catacagtac ttacagtctc
      481 agcagcacag aactcaacag gactgggctt tggaagcata acaactttgg aagataattc
      541 aacgaatgag gaataaaaga aaggattcat cttacatgat agaaacacaa caggcccaaa
      601 ttactacagt caaaaaagac tgagtgcttt accctcagat ctcttcttga atgactttgg
      661 gtaaaatgaa aagaatgggc cgctacccaa acaac
//
LOCUS       KCPA01001081             426 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 118518tic ultra-conserved element locus
            uce-297, sequence.
ACCESSION   KCPA01001081
VERSION     KCPA01001081.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 426)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 426)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="118518tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>426
                     /note="ultra-conserved element locus uce-297"
BASE COUNT          122 a           59 c           72 g          173 t
ORIGIN      
        1 gctttacttt acataatttg ctgattatat ttaaaagaaa tacaattttg caattactgt
       61 tctttctggt gtgctatcta tgcatcattt tctttttatg tttatatatt tctccttcat
      121 tagtgcagtc tgaagggtga ttagatccct tcaaacattt tacagaggtt aaacgttgat
      181 taagatttaa ttattactgt aaatagcttg gaatgacata tggtgcaaaa acctgacata
      241 tgtgcatttg aataaatgaa gtgctatttc ccatgatgct tcagtagctg tttaacagct
      301 ttgctgaagg gttatgttgc acctcatgtt aagattgctt tgatgttata ttttgttggg
      361 tttttgcagc tgaaagctaa gaacagtttt tccagttttt aaaaacattg aatattttaa
      421 atacct
//
LOCUS       KCPA01001082             869 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 118630tic ultra-conserved element locus
            uce-1813, sequence.
ACCESSION   KCPA01001082
VERSION     KCPA01001082.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 869)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 869)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..869
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="118630tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>869
                     /note="ultra-conserved element locus uce-1813"
BASE COUNT          251 a          191 c          203 g          224 t
ORIGIN      
        1 atgaattaat gaactaaata acagggaaac ctttctgttc agaagaactg gcatccatat
       61 agccacattc tctttcagct aacctttacg tgagagaaac ttctgctgat gtcaaaggac
      121 ctggaggaca ttagcagctg atactggtgc ctgtcgggtg ctgttgggtt tgtctcccca
      181 ccaccaggct ggcttccctc actactgcca gtgaccttgc aaacagctcc aacaaaggtc
      241 ggaatggatt cattgatcag ccaggccaag catatgacag tctgtgcctt aattgaatcc
      301 caaaaggggg cagactgggt ttttattaca gaggccagac gatagcactc attaaaagct
      361 ccacagactg tgtggtttac taattagttt attatacaga caccttgacg atgggcaaag
      421 ttgtcatttt gccctttatc gcacagggga tgttgttaaa agtttaatca gctaacactg
      481 accaacttag cttggcaggc tgtggacagt cattaccgag gtcacccctg ctgtaacaat
      541 tctgacaggg tcacagcatg aatctccaat agaaaacaca ttacataagg taagagtgca
      601 cctgaaaggg aaccaggaaa agagatgtgc tcagtgggga gcaggaaaca gatggactgt
      661 tcggacaagt gaagcctgct acggattctc tttgcttaca tcgtttaaca tatgcttttt
      721 ggaaatatgg ggagctctga gctattgctg tgatatgttc attagaacac aagatagccc
      781 gaaccaagct gtctgtgaac aggcactaag tggctctgct cttgcaaaag cagggatgat
      841 ttccctggtt aagcaaagcc taacactca
//
LOCUS       KCPA01001083             531 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 118736tic ultra-conserved element locus
            uce-5908, sequence.
ACCESSION   KCPA01001083
VERSION     KCPA01001083.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 531)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 531)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="118736tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>531
                     /note="ultra-conserved element locus uce-5908"
BASE COUNT          183 a           90 c          100 g          158 t
ORIGIN      
        1 gggcagatta agctctgtga acctcacagc tgaaacctca caacactggc aattttcagt
       61 gattaaagta atttacttta tctataaaat gtaaagatat ttcataatag ccatacagca
      121 agcacaggga ggtgtagttt tcctggagat aatcagacct ctggggatag agggtcctgg
      181 ctgcacctca tgcattgcga gacccagagg gctttattat ctgatgatta ccacaccccc
      241 atttccatgt ctttttgctt aattaatcac agtaacatta ttgcccaact tcagacaaca
      301 aaaataatga gaggggcttt aaaagattca agactagagg aaaaacaaga gatcccatag
      361 gaaagtaccc atagtgaagc tgaggtttac aaatcactga aatctattaa aaatgatgct
      421 tacattttgt aaagtgcctt ctttaatata aatataatta tgttttaaat attgtagatg
      481 tgtgtataca atataaaaaa tatgcttgtt ttgatcagag gagatgaggt t
//
LOCUS       KCPA01001084             769 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 118847tic ultra-conserved element locus
            uce-2700, sequence.
ACCESSION   KCPA01001084
VERSION     KCPA01001084.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 769)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 769)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..769
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="118847tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>769
                     /note="ultra-conserved element locus uce-2700"
BASE COUNT          232 a          135 c          179 g          223 t
ORIGIN      
        1 gagcctggtg agcgtataaa cagccattat tgcagccatg tcccccataa acatcatctg
       61 gggccaggtg gggggtgagg gtgcattcac tgctgccaga agcatattct cacaaaagaa
      121 gccaaggagg cccatttcat gcttccacct cactggtcta ggaagaaatt aatgtagtgc
      181 agaactcagt gatatacttg ggtctgggag ggctggatta tgatttaatt tttgagctac
      241 tgggttctaa gcctgcaccg tcttaagctt gcagctattg gcatgtttga cattttaaac
      301 tatgaaatac caacctattt tgaaattgtc caaatcatta gttgtggaat tttcctagca
      361 cttcatgaat accactgtta attgggcaat taactcgaaa ctacagaata tgctgtgatg
      421 gcatgatatg atataagcca tgtaaaagaa ggaacagcca agcaactcag tatgttgaaa
      481 gatattaatg aagtggcaaa atctgccaga aaaataataa tgggtgattt taactacccc
      541 aatattaact ggttgaataa cacatctgta catggtttgg agaagcagct tattgatact
      601 ataaatggct tctttttgga gcagctcctt ctggagcaca gaggaggagg agttccactc
      661 agttattaat ttgtgtgtgt gtttgtgtag aaagcaagca tgggtgttct gctaagcaac
      721 aatggccatg ggacaatgag tttgaatcta tgatgaagta tttcaagtg
//
LOCUS       KCPA01001085             632 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 118956tic ultra-conserved element locus
            uce-2168, sequence.
ACCESSION   KCPA01001085
VERSION     KCPA01001085.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 632)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 632)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..632
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="118956tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>632
                     /note="ultra-conserved element locus uce-2168"
BASE COUNT          207 a           97 c           93 g          235 t
ORIGIN      
        1 aaggtaatgt gggttaaaat actgttttct tttctagact gctcttcagg aatagttaat
       61 gtctagtatt atttttttat gtaggtatta tagattaaaa taatcttgtt tttaaattac
      121 tgtttacatc ttccctttaa atttcttagg aagcttaaat tacatgccag tcatactata
      181 atatccaaag attactttcc aaaaagtaaa agtggttgtc aacatccctg tcagaagcca
      241 ggaaatcacc aagcaagcct gctaattatt cttaatgggc aagatgagca cattaagaaa
      301 caaatgaata catcagtgaa atgtaattga aaatcgacct ggcaatagtg cattgcatct
      361 gagaatctgc ctttgtatta tcaacatcat cataattatt gttgtttttg ttgttgctat
      421 cactattcag tgagcataac taacagcttt gctttgtgaa atctcaagct tttgaggatt
      481 tgattttttt ttgacatgcc atttcatact gccacatgaa atattcacta tatatatatc
      541 catattagga tatgttattg aaatgttagt caaaaaaaaa tttcagtttc aaataattgt
      601 tgtcattcta atcctctcat tgtgaaatat ac
//
LOCUS       KCPA01001086             618 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 119060tic ultra-conserved element locus
            uce-7184, sequence.
ACCESSION   KCPA01001086
VERSION     KCPA01001086.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 618)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 618)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..618
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="119060tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>618
                     /note="ultra-conserved element locus uce-7184"
BASE COUNT          177 a          101 c          126 g          214 t
ORIGIN      
        1 tgaaactttt ggttgacctt aggtatgcag aggaagacaa aatgcatcat taaaatgctc
       61 agtcttagat ttcattaatt ttatgactgt aaaattgtca cctacatttc caaatgaaat
      121 gctctaataa ggaagacagg tttatgtggt aaggctttgt agttcttcag ttcagaccac
      181 gcttgaaact ttttcactct tcctttaggc aaatccctta gaagcagaat gtttcaattt
      241 tacacatttt gtgtcaattt tccagacaga aaagtagccc ctagacatta gacatttagc
      301 tacggaaagg cagtttcctt agttttattt gattactaga agttagattc ctgctgatag
      361 ttcaggactg ttagtggtta cctgactatt tgacagaaaa catttcctct cctttgctta
      421 acctttgact catgaatgta aaagttttat cagagctgta gtagaagcac tggtgaggtg
      481 gaagtctact tatggcaaca agggttgtgt gtgactttga ataaaagtct gagttgtggc
      541 tcatttggat taagagaaat actaagtgtg ttttcaattc ttggtctctt gcttttgtga
      601 cagacagggg cagtactt
//
LOCUS       KCPA01001087             581 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 119171tic ultra-conserved element locus
            uce-4850, sequence.
ACCESSION   KCPA01001087
VERSION     KCPA01001087.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 581)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 581)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="119171tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>581
                     /note="ultra-conserved element locus uce-4850"
BASE COUNT          201 a           93 c           96 g          191 t
ORIGIN      
        1 aacttaagaa taaaaactaa cttgtcaaag cagaacactg tttacagtga aaaaaaaaca
       61 ggtagaactt gcgttttaaa caaactatca gtgtaagaaa aacagcttat aacatatgtg
      121 caaccaagag cttttcacaa tattttcttc aaactcttta aaattatttt taatgacaat
      181 tatatttcag ttggacacaa atgtatttat tttaccctag caatagaaca aaatataatt
      241 tctttagcca ttttttcatg agaacggttc attgtacagt tgaggaaata tatgaaataa
      301 ggcctgtggc ttgattgcta gtggttagac atgtattcaa tctttgccct aatggaaaag
      361 atttgcagtg aactgcaaac tgatgcagaa tatctctcct gcttttgcaa gtcttgtcag
      421 gaatagtaag gtacagtaaa tttgtcccac aggattttaa agcctacgcc ttgtatataa
      481 tacaatgtag gcctacgtgg tgcagccata tttacaaatt tagttcacaa actgctgcag
      541 taaaatggct ggaaagtgtt tatttctctt ttgttaaatt c
//
LOCUS       KCPA01001088             370 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 119280tic ultra-conserved element locus
            uce-7310, sequence.
ACCESSION   KCPA01001088
VERSION     KCPA01001088.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 370)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 370)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="119280tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>370
                     /note="ultra-conserved element locus uce-7310"
BASE COUNT           97 a           84 c           83 g          106 t
ORIGIN      
        1 atcagctgca gcgcacagcc cacttttatt tatttgtagt ttttgacacc caccacctcc
       61 ctgccagcct ggtgtggctg atcaagctgt tcaaacaact ggaagacatc agaagttaaa
      121 cactcattat tttaatttga tgctaatcat gtgttaatga gactaatcct tgcaatgatt
      181 caggtaattt gcttaatggc tgcccagagt acagattaca gcaatcagtc acatctgata
      241 agatgtctgt tgtggagaag cctgtcaggt gaatgaggtg ggaagatctg ataagtcagg
      301 aaccttcctg ccccctgcac atggtcctct cctgcctgga gaggattcac acgagatcat
      361 ttgggtcgtg
//
LOCUS       KCPA01001089             701 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 119389tic ultra-conserved element locus
            uce-7081, sequence.
ACCESSION   KCPA01001089
VERSION     KCPA01001089.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 701)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 701)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..701
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="119389tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>701
                     /note="ultra-conserved element locus uce-7081"
BASE COUNT          178 a          157 c          151 g          215 t
ORIGIN      
        1 gggaatgctg cccatcgatc aataggtgta tgatgaagga acttcgtcct gctccctctg
       61 accagcggcg atgttttttc aatgattctg caggagtcaa aaactcaaca aagcgaggcg
      121 cggatgctgt aaagggagca tgctgctcat gtctgtgacc actgtatgca aagcttggca
      181 ttagtcaccg ccaggccgcc tctgacagcc ctgaagtgag ggagattaat gtgaggcagg
      241 ggcactttat tattgtcatt ctgttctttc acactctgcc tctgactttc aattttgctc
      301 cagaattaat tgtctgctcc ctacagtatg actgatgtag aaggatacaa gtaacatagg
      361 cacctggttc tggccttgac aatctgactc gttgttgcag gatgtattgt gtacagtcaa
      421 attcagggac agacgggcat ctttcaaaga aatcagccaa tgtttctttt gacttcaatc
      481 agatttgact gcagattatc ctcctctaag aacaattttt ttcttgtaga gatgctaaca
      541 aaatgccagt gccattatta agtaccacta catgatacta ttgctctgct ttatgccgcc
      601 tcatatgagg cctttctctc caagctttgc tttttatgtt gtaaggcagt aaattagtca
      661 tgtagcagtg tttaatccct accctctcag agtcaagcat t
//
LOCUS       KCPA01001090             472 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 119495tic ultra-conserved element locus
            uce-5963, sequence.
ACCESSION   KCPA01001090
VERSION     KCPA01001090.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 472)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 472)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="119495tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>472
                     /note="ultra-conserved element locus uce-5963"
BASE COUNT          124 a          107 c           79 g          162 t
ORIGIN      
        1 acactccctg cagccaagag gggagggaga ggagcttcca gggtgaatca gtgagatatg
       61 cagcatgcac agattgactt tacagcactt gaactctatg aatgcaaatc atctccttga
      121 aggaaagagc atgtaaaact gcccttgctc tttctccttc tttcctttca ctttatcctg
      181 tcagcaccac atatatcaaa ctagagctct gggttttaac taggctttac tgtttcattc
      241 tgcttcatga atttttcagt gtttacactt atgcttaata taataagatt gataatgcag
      301 ctgcctgata gattctcatt caggcttctc agctagagag attcttattc tttcttccta
      361 atttctgtaa tatccaaaag ttcattttca ccttttgcat cttgatgctt tttttcatct
      421 ttcagctatt catctcccga aacaatgtct tcaaggtaac aacacccagt gg
//
LOCUS       KCPA01001091             580 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 119604tic ultra-conserved element locus
            uce-258, sequence.
ACCESSION   KCPA01001091
VERSION     KCPA01001091.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 580)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 580)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="119604tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>580
                     /note="ultra-conserved element locus uce-258"
BASE COUNT          184 a          116 c           99 g          181 t
ORIGIN      
        1 gctggatgct gggaaggcta acagttagca gtagggacat ggccctgctg accacattta
       61 atcaacccct ctgtaaacaa ttcaacattt tcattgttct ctaaaaacta ataaagagaa
      121 acaagcactt ttcattcatc ttgaagtaat tttctgtcag gtttgagccc cttgtggctt
      181 acagcttgtg cattgctagc tgtgtgatac aacaactatt tcaatttatt ttacaaactc
      241 tggccattca catgtcagtt agtgttcacc aagccggcat ctgaaattgt gcagttaacg
      301 agttttacaa catttctatc aagagaaact gtttagcata actgactctt aaggagttat
      361 tatacctcta aaaatccatt ttaaggggca ttatttaaat aaaatagaaa aacggttcac
      421 tgccttttaa aggggctaca aaaaaagtcc atcagatcca gtgcagtaat cctcagctta
      481 aagcactctt gagagcactt ctgggaatta tcagcataat gaaatgtttt gtgaaatgtc
      541 cagatagatt cctctactca acaattttac tgcactatat
//
LOCUS       KCPA01001092             545 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 119713tic ultra-conserved element locus
            uce-2600, sequence.
ACCESSION   KCPA01001092
VERSION     KCPA01001092.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 545)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 545)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..545
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="119713tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>545
                     /note="ultra-conserved element locus uce-2600"
BASE COUNT          148 a          138 c          113 g          146 t
ORIGIN      
        1 ctgtctgaac tttgtctcgc gtacggaagg ccttcagaga gctcaggaca tgtttgtggc
       61 aggtgaaatt ttctgtccag gcagccattc taccaggcag catcagctgc ccgaggcaca
      121 ctgccttcac actcttttgc tccacagctt tagcttattc cttttctcag aagagctcct
      181 tctaatgtct acacaccagc aaacaaaaca gatggggtgg tggaaaatga ataattagcc
      241 tctgcaccac tgagttcaag ctaatactct gaaccaggta tgacatcaaa tcatttccag
      301 tgggacaaca aatgtcatga tggagatgag aatttttcag atgcctcttg tcagaagcaa
      361 acacgagaaa ggttttaact cttccagtag tctgcaagtc ccaaaggttg tgttccttgg
      421 ctacaagatg gaaatctctt cttttctcag catagcaatg gctgccacca gcacaagtaa
      481 tccctcaggg cccagctttt ctaccttagg cctaaagact tctaacacag ccttggcatg
      541 catag
//
LOCUS       KCPA01001093             497 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 119821tic ultra-conserved element locus
            uce-6447, sequence.
ACCESSION   KCPA01001093
VERSION     KCPA01001093.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 497)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 497)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="119821tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>497
                     /note="ultra-conserved element locus uce-6447"
BASE COUNT          165 a          107 c           94 g          131 t
ORIGIN      
        1 atacctggaa gaggcttctt gccaccaagc tggtaaaaag gacatattta taaccttctc
       61 tatgcgcatg ataatttagc attacagatt tccagataaa tgattgcaaa gtgatgccaa
      121 tgttctgaaa ccgacaccct acttttgcaa ccattctctg tgttgaaaaa gttcctctat
      181 ccagagccat ttattgagca aacacacacg atctaatagg acatcatctg atcaaagttg
      241 gatacctgac tttggagtat gagaatcata aacttgctta cggtctatct ggtctgcaaa
      301 cacttcccca tagatcatcc agtaaggcat gtaaaaaatg tttttcgcca gcttccatga
      361 aggctcctca ttggggaaga gaattgcctg tcttgccaca ccaaagctca tcagaaccac
      421 caacatgatg atgacaaagt acatcatgtc tatcatctga atgtaatgac aggaaaaagg
      481 agagaagaga gagaaag
//
LOCUS       KCPA01001094             846 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 119930tic ultra-conserved element locus
            uce-1456, sequence.
ACCESSION   KCPA01001094
VERSION     KCPA01001094.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 846)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 846)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..846
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="119930tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>846
                     /note="ultra-conserved element locus uce-1456"
BASE COUNT          272 a          121 c          168 g          285 t
ORIGIN      
        1 ctgtagtaga gatggaaaga gttaaattaa tcaggtcaga atgctaaaac tgatattcct
       61 ccatctcaac ataccacatt aaaaagtagt ttggggtgcc tggcatcatc atgactagta
      121 atatacataa tatcagcagt attcaggatc attcagaatt gaagtgccat aaataaataa
      181 ataaatatgc attatgtgtc tttgtgcatg ttagagatac ataataggca gtatatgttg
      241 aaatctatgt ttcacatcaa acctctatag catgcttcat gagggagaca agacccatgt
      301 gttttgcaga agcttttaaa gctgtttcat ttattttatt agcctttaat gaatgtaatt
      361 agaacccaag taattaaatg caattgtgct cagtatgttc ctgttgtaaa ttgccctaaa
      421 caatgtgcat ggtgtgaaca aatttgtggg attaatagag gatagataat gtttttggat
      481 agtatttcac actaaacggc cgcagagaga aacaaagaag ctggcgcagt gtcattaatc
      541 ttagtcaact ggcagttctg gtgtaatttg catgacttag gcagtgacac aagatggggc
      601 tagcttggga tgggtgttag atcactagga tacatatgta tttatttctc tttagtactc
      661 tgatttataa gtaaaaagaa gtttgtttta agaaaccgat tcattctggt ttcatctttg
      721 tcttagatta atagaattac tggcagtata ttgtatgtgt tcctttgttt ttatagttag
      781 catattggtt tatggatatt aaaaaacatc tgtgcatcct tatcaccaca gtagaaaagc
      841 agatgt
//
LOCUS       KCPA01001095             718 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 120042tic ultra-conserved element locus
            uce-5422, sequence.
ACCESSION   KCPA01001095
VERSION     KCPA01001095.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 718)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 718)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..718
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="120042tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>718
                     /note="ultra-conserved element locus uce-5422"
BASE COUNT          237 a          139 c          120 g          222 t
ORIGIN      
        1 aagaggaaaa ttatgtcttg aaatatgact gggtgattat atttagactc tgaaagatcc
       61 actgaagaat catctgcttt actaggtaaa gttctgacac tggatgtaca atattcatct
      121 gcaacctagc aaatcattgc aatgtaggat tatgaacgtg cattaaatta aatattgtta
      181 cagagttttt ctcccacctc aggatgcact caacactttc ctccttccta tctgacaata
      241 tgttgccatg ctataaaagc cctaatgccc atttcaacga ttagctgtac atcagcatta
      301 ctacttcaaa tccacaagtt tcacatcaag cattaaatgg gatgaatatt gatctgttaa
      361 agaggattta tttatttcta gctctatcca aagatcaact actagcagct ttcggtggat
      421 ctgttgagct ctcacagcac aaagctactg catacatgac atcggacttg acatttcagt
      481 tctggaagaa aaccaaacag taaattcact gcaataatcc tagataaatg agatgatcac
      541 tggaaaagct gagatagtta agtggtctat cagaaaagtc caaaggatga tattgaattg
      601 ttgctacata gtaacctctc tacatggcac aagatcacct gccaatatct ttgtcttgat
      661 tatcttggaa cagttcagaa ttatgttctg aactgaaatt ttatactcag attatacg
//
LOCUS       KCPA01001096             700 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 120152tic ultra-conserved element locus
            uce-7617, sequence.
ACCESSION   KCPA01001096
VERSION     KCPA01001096.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 700)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 700)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..700
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="120152tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>700
                     /note="ultra-conserved element locus uce-7617"
BASE COUNT          244 a          123 c          114 g          219 t
ORIGIN      
        1 atagagcaga gtatactgaa taaagaatta tgcatgcatc cacaaagttg tcttcttagc
       61 caagtagggt ttcatctccc atgctcctaa gtcaattata actaacatct ggagtctctt
      121 taaggcaaat attgtttgta ccaacattac ttaatcttct ggttagcttg tgtttaaaca
      181 gtccacagag gaccaataca gcaaggaaga gtttatttct cgtaaagtaa ctagagtctt
      241 gttatcctaa agtgctatca gttaatttat gactatcaga gtgggtcaga ctctaatcaa
      301 attgtagaaa catttccaaa gtgattattc aatcaaatga ctaacatggt taattaggag
      361 ccataaacat tgctctgaag ttcatcaaag taatgacttg cccagaaaaa ttactgctaa
      421 ttaaattgcc tgctgctttc atttctacct tatctaataa aaagtccaac caatgaaatt
      481 tagtattgca gttttaaatt gtactaaatg cttgactaag acccagaagt atttttacat
      541 gctaagcgga gctacttcaa aagaaaacat tttagtgtag aaataacaga gcaattatat
      601 gttttcttct ccttaaacca ttgtttcaaa acaacaaata agacagaagc aggcatgaaa
      661 tacttccagg gcaagatcca agtgtttgag atgactgatt
//
LOCUS       KCPA01001097             620 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 120262tic ultra-conserved element locus
            uce-5889, sequence.
ACCESSION   KCPA01001097
VERSION     KCPA01001097.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 620)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 620)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..620
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="120262tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>620
                     /note="ultra-conserved element locus uce-5889"
BASE COUNT          200 a          112 c          101 g          207 t
ORIGIN      
        1 aactcatgac atccctccat atcaaaatgt tttggtaatc attctgttta aatagtaaca
       61 ttttattttt ttaagcactt agattcttga tctgaatcca tattcatgga ggtctgctgt
      121 aatccacttt accacttaat gttgcaattc aaatgttcag taagaagcaa agccctccag
      181 aataaagcat gaatattacc atgtgggggc tgtaaagaga agactattag aatatatcac
      241 caacacacta ggggaccatt tagtgcactg ctctaaatac atcatttaat tacaatggag
      301 acattacttc atgtttctac tgatgtaagt attattagaa ttcatgatat tcgcaggcta
      361 ctgtgggcca ttacattggc cataagctat tccataagat ttactactaa aggcccgcaa
      421 gggtatttga gcattcatgg attctgtggc agtaggcttt tatctaagac acataagtga
      481 gggacaaccg agttattatc tctaagaaac atagcttaat attttggatt ctaaaggtta
      541 aggtaccata aatcctgaat tactctgaga tatcacataa aaagacattt ttattttatt
      601 ttactctact ctgcctctta
//
LOCUS       KCPA01001098             540 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 120368tic ultra-conserved element locus
            uce-5072, sequence.
ACCESSION   KCPA01001098
VERSION     KCPA01001098.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 540)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 540)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="120368tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>540
                     /note="ultra-conserved element locus uce-5072"
BASE COUNT          158 a           95 c           91 g          196 t
ORIGIN      
        1 agtaggatat attgaacatt tcacaaaatg acctgcagac ctttgtggtt ttagatatgt
       61 tccatgtgta cttataagac aatatctaca tactcttcta atatatggtt ttagtctgaa
      121 gtacaaaagt ctgatttatg taagacctac tcagatacat taagtcaggt taattatttt
      181 tcttatcagg agatgagagt tctttaactc tcctgagttc atttctgtgt cttctaacct
      241 aaaaagaatt cttaagggct attataagat ctttattatt cacttgtggc ttattccatt
      301 ggagctactt gaaagaaatc aagggtccct aataatagct gctatcctaa cctggtaata
      361 gatagattca tctttgttag agtggtttgg gagtgcacac tgtaatatct ctgatttgaa
      421 gcggctcttc agactgtcaa taacgcacaa ctcaaaatag cagtttttta attaaaggtt
      481 ttgagctact gcccccatta aaattttctt ttcccttacg cctgcttagg ctgcttaata
//
LOCUS       KCPA01001099             553 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 120478tic ultra-conserved element locus
            uce-3637, sequence.
ACCESSION   KCPA01001099
VERSION     KCPA01001099.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 553)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 553)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..553
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="120478tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>553
                     /note="ultra-conserved element locus uce-3637"
BASE COUNT          206 a           78 c          103 g          166 t
ORIGIN      
        1 aaaatatatc ataggatagt gctaatgcat ttatgtgcaa tgagagtcag tttaattata
       61 gtacatttaa gatttgccaa gggcaagaaa ctttataaca acatacaaag gtttaataag
      121 catgaaacat aagaacaatg tagactaagc ttccttgcat ccgaaaagct aaaatgcaaa
      181 gaaattttta tttattgcct caggtaaaaa agtctgtaga aacagataag tcatgacaaa
      241 gctttgatgt taataaaccc aaatggaaat aaaaatcaaa gtgtgtaaat ggctaggtta
      301 taaaaagaaa gatgacagag ttataccctg taattaggtg taatttgtgc ttttggtgca
      361 ctgtttgtcc tgcatgaatg agaggttgtc cttgtccctg tgtaatagaa ttgcagggca
      421 catcccactt aaaatctccc taggacaata agtatttgat gggagcacta tagccagttt
      481 gccttttcta gtacttgaaa ataatcataa gctgagtgtt tataaaactc tagaaacaaa
      541 gtaataattt tag
//
LOCUS       KCPA01001100             772 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 120590tic ultra-conserved element locus
            uce-6642, sequence.
ACCESSION   KCPA01001100
VERSION     KCPA01001100.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 772)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 772)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..772
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="120590tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>772
                     /note="ultra-conserved element locus uce-6642"
BASE COUNT          220 a          230 c          145 g          177 t
ORIGIN      
        1 aggatgaacc agttttctca aggccaagaa ggcctcaatc agggaaaccc tttcattgcc
       61 acctcaggac ctggccactt gtctcatgtg ccccagcaga atcctagtat ggcaccttct
      121 ttgcgacact cagtccagca atttcaccac catcccccta ctgctctcca tggggaatca
      181 gtagcccaca gtcccagatt ctcccctaat cctccccagc agggtgctgt taggccgcaa
      241 acacttaatt ttagttctcg gagccagacg gtaccctcac ctactataaa caactcaggg
      301 cagtattctc gatatcctta cagtaacctt aatcagggat tagttaataa tacagggatg
      361 aatcagaatt taggccttac aaataacact ccaatgaatc aatctgtacc aagataccca
      421 aatgctgtcg gatttccatc aaacagtggt caaggactaa tgcaccagca gcccatccac
      481 cctagtggct cacttaacca aatgaacaca caaactatgc acccttcaca gcctcaggga
      541 acttatgcct ctccacctcc catgtcacct atgaaagcaa tgagtaatcc agcaggtaca
      601 cctcctccgc aggttagacc tggtagtgct ggaataccaa tggaagttgg cagttaccca
      661 aatatacccc atcctcagcc gtcacaccag ccccctggtg ccatgggaat tggacaaagg
      721 aatatgggcc ccagaaacat gcagcagaat cgtccattta tgggtatgtc tt
//
LOCUS       KCPA01001101             978 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 120702tic ultra-conserved element locus
            uce-353, sequence.
ACCESSION   KCPA01001101
VERSION     KCPA01001101.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 978)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 978)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..978
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="120702tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>978
                     /note="ultra-conserved element locus uce-353"
BASE COUNT          262 a          186 c          211 g          319 t
ORIGIN      
        1 ttgggagctt gagcacaggt gagtggacag cattttaagt actatgttta ttcaatgttc
       61 tctaatcagg gttagataat atgtatttac aaagccccac tctgtattgc ccaccttgga
      121 gcattgatgc cattgaacgt attagcgtcg gtgaggggtg gctgtaaatt ttgcctcatg
      181 tagacaaggt ttacaaggta agcaggcaga cccccagctg caactgcgtg cctgggaatg
      241 gaacctttta tttgctgtca tagtgatgac ttttaattgt cccaataaac aagcttttaa
      301 aaagcttcta aaatgttctc taataacaca ctttggtctt tagccataga aatgcagaaa
      361 taattagaag tgccattgtg tacagtgcct tctggactgg gctgaaggtg aaggagaaag
      421 tatcatacta tccttgtcag ctgcaagggt aattactgct ggctgaaatt actcaacatt
      481 tgtttataag ctccccagag catgctgtaa atagattgtc tgttatagtc caatcacatt
      541 aaaacgctgc tccttgcaaa ctgctacctc ctgttttctg taagctagac agagaaagcc
      601 tgctgctcac ttattgagca ccaagcactg aagagctatg tttaatgtga ttgttttcat
      661 tagctcttct ccgtctgata ttacatttat aatttgctgg gcttgaagac tggcatgttg
      721 cattcctttc atttactgta gtaagaatga atagctttat ttctgggagc tgtatgcaac
      781 agttgatggg aattttggaa tagcagaagc gtgggaatat ctacagacaa cttgttctcc
      841 tcttgggcaa tgtttttctc tttaccttct aagtgctcct gcaccagttc catcagtggt
      901 tgcttgccta aattgtcctt taaaggctga ggagtatttt cataaaaggg tagaaagaat
      961 gtattttcct tagcgctg
//
LOCUS       KCPA01001102             324 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 120809tic ultra-conserved element locus
            uce-3249, sequence.
ACCESSION   KCPA01001102
VERSION     KCPA01001102.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 324)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 324)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="120809tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>324
                     /note="ultra-conserved element locus uce-3249"
BASE COUNT          104 a           65 c           54 g          101 t
ORIGIN      
        1 ttctcctcag ggtgacctct accttcagaa tatgatggtt ttattatgat taataaattt
       61 catttccaca gaggaaagga acagtgtcag cttaaactta aagcaagtgg gtttcttttt
      121 aaatgctaat ttttaaacac gcccttgcat gacaccaaat ttagaagctc agaaggttag
      181 cagaatagat tctgatttcc aggctgaaaa taggaagaag gatttaaact atattgccac
      241 actgcaaatc agtaagctgc ttcagtccca cacacacagc ttcagttact ccctgttaac
      301 ttctcattac aattagtgac attt
//
LOCUS       KCPA01001103             651 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 120918tic ultra-conserved element locus
            uce-5901, sequence.
ACCESSION   KCPA01001103
VERSION     KCPA01001103.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 651)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 651)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="120918tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>651
                     /note="ultra-conserved element locus uce-5901"
BASE COUNT          218 a          131 c           96 g          206 t
ORIGIN      
        1 ctgaaattgt gatacaagat cacattcact tttaccttac cctaagcaat acaactgtaa
       61 aggaatatat gctatgcact atcatattat aatctattta aaagaactgg cacagctaca
      121 ataaaatcat ccttttttga agctagttct ttgtaaatta cccaaatgct agagttgagg
      181 agagcctttg gttttttctc gttggcactg caaaccccct cttgctcaag acacacatat
      241 ccctcaactt ctgtcaaaag caagaacaaa tttcctaacc aaaactgaaa agtccttggc
      301 ttttcaaatg actataaatt gcatggctaa gtgcatatgg ccacagggct gtcacagtta
      361 cttttcctga caattcatca tagcatacta attctgtaat atcattactg tgtctcttct
      421 cactgtactg atccagccag ttaatttaat caactaataa tagattcaga aatggatgca
      481 aagggcccta gcacttcaaa ttatattact agagatacac agcagtgaaa acaatgtatt
      541 ctatacttgc cattaaatat aaccccagta agctatattc tcttgtagga gatttttctt
      601 taaaagggaa agtatttgta cagatttaga aaaggtgcag tttatttcac a
//
LOCUS       KCPA01001104             615 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 121028tic ultra-conserved element locus
            uce-6087, sequence.
ACCESSION   KCPA01001104
VERSION     KCPA01001104.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 615)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 615)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="121028tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>615
                     /note="ultra-conserved element locus uce-6087"
BASE COUNT          182 a           84 c          115 g          234 t
ORIGIN      
        1 acagaagtct tgtgtaatat gggtataatt tttaattgtt tgcattattt tcaaagttca
       61 aattatcact ttgagattac tataaataca cttaaaatta tctattttaa attaagaaaa
      121 tattagagat attttcatgg gttcaatgac ctttcatttt ataagcaatg ggcatggtac
      181 agagtggctg tcatgtaagg tacttgaaga ttcttagttt aattctattt ttgcaataac
      241 cttgactttt ttttttgagt tgtgcatgta atgagtccag taaatgctga aaatggggaa
      301 gagtaaagta tttatctaaa ataaaagcta ttggggaggg gaaacaatga atgtatccat
      361 ctgtacatga tttacatgct gtggatgcct tgtaaacatt ttcctatttg tttaaactgt
      421 gtttcagcga ggatgtaatt gcccttgtgt gtagttttaa gctaatgaca gtcatcaact
      481 ggttttgtgt gaaattaaat tcatggtatt tttctgtaac tttatcccca tggtgagtct
      541 gtaaaaacca cacgctcttt catactgatg ccgaaggcca gcttttccag tcattttgat
      601 tcactgtgta tctga
//
LOCUS       KCPA01001105             366 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 121131tic ultra-conserved element locus
            uce-6330, sequence.
ACCESSION   KCPA01001105
VERSION     KCPA01001105.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 366)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 366)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="121131tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>366
                     /note="ultra-conserved element locus uce-6330"
BASE COUNT          127 a           68 c           62 g          109 t
ORIGIN      
        1 gtgacacagc atgagaactt atggtatagt tatctgaaaa acttacccac tccctataac
       61 atgtttagat tgctttttta gactctataa aattttagca agccctaaac atagaacttc
      121 attcatcatc atgcaagcaa aggctgccaa aggaagccta ctcttcctga gctaaaagtg
      181 gcaacactcc agtattggca gaaatcaaat gaatcatttc ctgcttttag ttttagataa
      241 ataatcaaaa aagattgtct agagtctgat ccaaaagtaa tttttcatag caaggaataa
      301 gactgcagct acaaagactt taagtgggga atgttatcct gttaattatt tgactggaaa
      361 ggccct
//
LOCUS       KCPA01001106             679 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 121242tic ultra-conserved element locus
            uce-2518, sequence.
ACCESSION   KCPA01001106
VERSION     KCPA01001106.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 679)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 679)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..679
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="121242tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>679
                     /note="ultra-conserved element locus uce-2518"
BASE COUNT          119 a          198 c          217 g          145 t
ORIGIN      
        1 ccccagtgca taatgtgggc ttctacctct tccgcaggga aggatgctgt gggaaggtgt
       61 ctccctagca agcgtgacct ggaaaatttt ctctctgtcc tcacagaagg gtcgaggata
      121 tatcctccct gtggtgccag agtgcgtggg tagcatgtct ctgtgcatgc ccctctttct
      181 ctcctcctct gcagtgagtc cctccagagg agaggaggtc tcggggcact ctcacctgac
      241 cttctcactc tcagtcattt cccaaagtcc caggttgagc accttgaggc agggcagctg
      301 ggtgatgcgc tccaggcccc gcttggtgat gcgggtgcag ccgtagaggt cgatgcccgt
      361 gagctggctg aggtgctcag cgatgagctc caggcccttg tcggtgatgc ggacacactg
      421 gccaatgttg agggtgcgca gcccgtgcat ctgccgaacc atgcggttga tgccctcgtc
      481 actgatgtgg caggagcaga gggacagcga gcgcagccca tcgaggccct gcgcgatgta
      541 ggctaggctc tggtccccca ccttgtcgca gaaggagacg tcgaggccag acagccgcag
      601 gctgcccatg gccaggtgca tgatgcccgt gtcgctgatg ttgtcgcagg agcgcaggtt
      661 gaggctccgc aagcagatc
//
LOCUS       KCPA01001107             639 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 121353tic ultra-conserved element locus
            uce-6827, sequence.
ACCESSION   KCPA01001107
VERSION     KCPA01001107.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 639)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 639)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..639
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="121353tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>639
                     /note="ultra-conserved element locus uce-6827"
BASE COUNT          191 a          130 c          129 g          189 t
ORIGIN      
        1 aaatgcaatt gggctgctcg cactgcagtt tacaacctaa aacaaaaata tgacctgtgt
       61 ttttgggtct gtcaatctta catctctcca atgtgactga gaaaagttat gtgatcattt
      121 ctgacagctc ttggcagctg ggcaggcaag cattggaaag gatctctctc tcctgatcca
      181 agattaaatt tggactgaaa cacagggctc atttaggcag caattaaagg accttataga
      241 ctgagggaga atgaaatgat aaatgcaaag aggcttattt aatggggata ttaagtaaac
      301 tgctggtaaa aatgcccatt tatcatccac tgattcctaa ttggtttcct gttcctgcct
      361 gcatgtggca ttttcagaag gaattacctt cctttagtgc gactgttgca aatgcaataa
      421 atcaaggcca tagatttcta gctaatttag atggagacta aattggagcc aaagcatgca
      481 agagtgcttg caattaatgt tcattacaac ttttagcttc ggaaggatca ttttaatgca
      541 ccattcccaa gcaaggacac tgcttcaaga cttggctacc ctttgtatgc tcagcaaaaa
      601 tcacttgcct ttgtaagcca ctggccttcc tgaaacctt
//
LOCUS       KCPA01001108             807 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 121465tic ultra-conserved element locus
            uce-3, sequence.
ACCESSION   KCPA01001108
VERSION     KCPA01001108.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 807)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 807)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..807
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="121465tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>807
                     /note="ultra-conserved element locus uce-3"
BASE COUNT          260 a          143 c          184 g          220 t
ORIGIN      
        1 ctctgttccc tgcacacagc tgctattcaa aaaatacaag gagctttgca ttatcatttt
       61 taagctagta accgtagaac agcgcagaat agatgacaca cttactgtaa tgtcccatgg
      121 agcaaagttc ccatctagag agagaggcac tcttattcca ctccctgcaa aagggttaac
      181 cattatgaag aaacattatg ccagacatta gcagacagcc tacttagata ttacattttt
      241 ccatacatga taaatcctga gtaaacctgt ttttcttttt aaacaccttg cagagtgaag
      301 cctagcactg catctagttg ccaaagcaca atcaatatgg aaggagcggt attttatgat
      361 tggagaagtt gttgtgtttt tggtggtgaa attcattatt tagtatctga accctcagca
      421 tttcagtatc atttattcat aaagtccctt tttgccagga ggaaatggat acagctgtag
      481 agagagagag tgcgagagag ggagagggag agggagtgag acggattgat gatattgatc
      541 aggtaccatc ttgaaacaaa ggctaggtgc tctattttag ttgacaactg tgacacataa
      601 aaaacaagca agagaggggg aaggctaggg ccttgaacat cacaggcttt aaaaagcgtt
      661 tgaagaaacc attatgacaa gcaggtctag gcaagctgct gcaaaaatgt attcagaaga
      721 gtcattaaaa aatgatgctt tgtttgcctt gtgaatatga ggtttgtagc tagctgcaga
      781 gcactctcct acagaggaaa tgatgag
//
LOCUS       KCPA01001109             600 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 121572tic ultra-conserved element locus
            uce-5902, sequence.
ACCESSION   KCPA01001109
VERSION     KCPA01001109.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 600)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 600)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..600
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="121572tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>600
                     /note="ultra-conserved element locus uce-5902"
BASE COUNT          190 a          118 c           90 g          202 t
ORIGIN      
        1 tccagcctcc ttcaagatgt gctacctttt tataaaacgt ctaatttttt tggttttgat
       61 tcaagaataa gtaaagttgt ttctgattta tggcaagtcg ttcacacatt ctctgtccag
      121 aatacagtaa ctgatgctcg ttccatcatg tgacttgcac aatgaactgt agtgggtcaa
      181 atagtggtga ctaataaccc taataagact tattcgatgt tgaagctaac aaatccttta
      241 tcagtacttc aaccattctg cttatgtggc ctcattgttc agattagctt ttcatctatg
      301 ggaactaatc cctttcatat acaattttag caagaagctt ataaaatgtg tattaaagca
      361 tattgacttg tccaacaata aaaagtacaa ttaggcttcc aacacagagc attgctaatt
      421 tacataaaaa cctctctaac ccattccttt tactgcacaa tataaccaag aggttacatt
      481 ctgtaccacg caccagtaat ttactgcaaa atcagtagat agctgtacct gtgtaatagt
      541 gttcactttc tttgtacaaa tcttttaaaa gtgaattgac atgccaaatg tatcaatagg
//
LOCUS       KCPA01001110             537 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 121686tic ultra-conserved element locus
            uce-4518, sequence.
ACCESSION   KCPA01001110
VERSION     KCPA01001110.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 537)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 537)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="121686tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>537
                     /note="ultra-conserved element locus uce-4518"
BASE COUNT          168 a          124 c           80 g          165 t
ORIGIN      
        1 ttttagaagg tgcatctata atattcctgc aagttttgaa atgtggcata ttattcagcc
       61 ctagtccttt gatgtgtgtt tttccctcaa tccatgctcc aacaattctg tcatacagag
      121 aactgaaaat taagttattc tcaccagcaa tactagaatc tatcaaacca cagatataaa
      181 cctcagaaca atccctgcca ggtttctcat gcaaatgacg cagaaaaact tacaagagca
      241 ctttaagata ttgagaaccc ttcaatacaa cccagtataa taacttttac ttgctaattt
      301 ctatgggtca gttgcaaagg aatagacctg tcaatctttt tcagatgtag cagaatttgt
      361 ctgtctgcaa acagggatgc tttgttgttg ccatagatac taatcctcca ctttccttct
      421 gttgacacag ctagtcacac tctaaactac ctgatcacac ttttaatagg cagctgactc
      481 cagtaccata aaatgctcaa atcaagttca caacacttga cgcatccact gttgcat
//
LOCUS       KCPA01001111             799 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 121797tic ultra-conserved element locus
            uce-4201, sequence.
ACCESSION   KCPA01001111
VERSION     KCPA01001111.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 799)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 799)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..799
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="121797tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>799
                     /note="ultra-conserved element locus uce-4201"
BASE COUNT          219 a          164 c          158 g          258 t
ORIGIN      
        1 catgaaacat agaaaaaaca cgagcgagac attttctgat agaaacaggc acatacatgc
       61 aaagcatcaa gctggaatat ttattatcct taaggaccaa accccaccaa agagatttcc
      121 agcctaagag cttcatggtc tccagctttc agttattcat tcaggatagc tgcaggttcg
      181 aagtgccagg actgaactat tgtgttaagg tattcttaat gcttcctctt cctacactgc
      241 cagactgaac gtcaccctag aactggtttg taaggtacaa tgagagactg aacctgccgt
      301 gtgaccaaga tgacattttt catcctcaaa gaagccacat gtacctttct gacaacgctg
      361 tgtgaagtat tagaatctga tgctgtagaa agatcctagt tgcctttgtg tatatttact
      421 gcctgcttga gtgtttctct gtgtgggttt tctctgtatc ttgtagaaat gtttggggtg
      481 ttttatcctg ccatatcgct cgtggcccgc gagctgacaa ctttagccgt attttacctt
      541 catttttgat gaggtggttt atattttgtt tcactttgtg tagtgactcc ccacagtaga
      601 gttttccaat tgtcgttaac atacatatta cacagatatt caataaaaat gttttatttc
      661 ctgttgatgt tttctctttt gatctaaaat tttgaaaaga cattatcaca tactttgaag
      721 tgtcacaaga atagcacagc gtttcgaggg gctgtgaaaa gctgctttca tcagtaagac
      781 actcacagcc agcagcgct
//
LOCUS       KCPA01001112             705 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 122016tic ultra-conserved element locus
            uce-2704, sequence.
ACCESSION   KCPA01001112
VERSION     KCPA01001112.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 705)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 705)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="122016tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>705
                     /note="ultra-conserved element locus uce-2704"
BASE COUNT          203 a          144 c          166 g          192 t
ORIGIN      
        1 aagctgctgt ttggacaaca tccatttgat aatgaagcaa gatgcaggct agacagctgc
       61 ttttttctca ctcatttcac tctgttattg gttaacttag tggaaaaatg taaattttcc
      121 agggacttta ggttggaggt atcccagcca aggtagatac gtgcttgact tgaggtctaa
      181 tttaactcct gtgtcgtatc gacctgcctg gcccaccagg gagcctcaga gccctccttt
      241 gccaaaggta gacaatggga tgaaagtaaa gtgtaataaa tgcccctgtc cagtcccatg
      301 tcgatatcca gctgcttttt ttttgctgtt ttgagtgcat cagtatttca cgtttattgt
      361 agtgtgatga aacacctttc agaatggcca gagggacact cagcagtagg catttaggca
      421 gtacaaattg gagtgaacag gaggacagtt agcagggaat atttctgagg tcaaagcggc
      481 ttggagctga atcagctgca gagttgagag ctacagtacc tactgcaaag taaatataga
      541 ttacattcct ctagacaaat tgatccgctg gaggacgata ggtctcccag aaaaagaggt
      601 tgctacataa gtattttaca ctgacaaaga acccttaaaa ccagcagcca gagatgtatc
      661 ttggagagtc catcccagat cctcacagga ctgcaagatt taagg
//
LOCUS       KCPA01001113             661 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 122126tic ultra-conserved element locus
            uce-7048, sequence.
ACCESSION   KCPA01001113
VERSION     KCPA01001113.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 661)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 661)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..661
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="122126tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>661
                     /note="ultra-conserved element locus uce-7048"
BASE COUNT          163 a          175 c          139 g          184 t
ORIGIN      
        1 gctcgtgtaa aggtttttaa agctcagctc acatgtgtgc acatattctg agctcttaac
       61 acttctaatt ttctaagata attgaatgac tcagtgagca tggctggcat taaaatcttg
      121 ggggagggaa aagcagaggt agcaagctct aaatcctgtg ccaaatcccc ttttcataat
      181 ttatagtctg tcaccagttt atcaccgaga actgtccctc tttttctcat tctccaggct
      241 cctttcccag tggacagtcc atgccagctg tctcggcagc aggaacgtcc tttttttccc
      301 aagcctcgac ctgtgggaaa atcttcattg gccagtaatt gattccaccc tgccagctcc
      361 attactttag cctacagtca aactgccagc aagctggaga caggcagcct cagccctccc
      421 ctgctcccgc tattgaaccc gctcctgccc gggctaccgc ggctctgagc tgatgtgtca
      481 gcccgccctg caattagcac taatctgaaa attggccttt gctagcaaag ccaagcacct
      541 gacagctaat tgttgatgtc agattgatgt gcatttaata tggaaaggtt atttatcaaa
      601 gagtagttgg tttgtctctg gattgccaca ggcgcttaca gcccacagag caataaagat
      661 c
//
LOCUS       KCPA01001114             702 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 122236tic ultra-conserved element locus
            uce-5093, sequence.
ACCESSION   KCPA01001114
VERSION     KCPA01001114.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 702)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 702)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="122236tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>702
                     /note="ultra-conserved element locus uce-5093"
BASE COUNT          236 a          110 c          117 g          239 t
ORIGIN      
        1 aatgttaact tttgatacac agaagtgctt gtgagcactt aggcctagaa aagaaaaccc
       61 acaggcccct ccttacacca atttattttt ttgaactgag tagaaaatat gtataagaaa
      121 atgcaactaa atatacttct gacagctcaa atgatacata aatataaggg ctgacaaggg
      181 ttggtttgtc attgtagttc acttcgatca actctacatg gttctctagg acaatgaaat
      241 tcaatgcact tataatttcc aaaaaagtga gctcagattc ttttaaaagc atttctatgt
      301 gaaaacggat catttacatg ccaaaagcac ttttaatgtg acatatttag cacatgtatt
      361 attgagaacg aaagctgctt gaacttagtg aattttaaag tctataaaat ggcaccctgc
      421 tgagcagaaa ggtagctgtt cagtgaattt tcccgttatg tgattatttt gaataataga
      481 cttgtacata acttttttat gaaattaaag gtatgacatt tgctttagtt cagtcctcta
      541 aattgcactt tagaaaataa agaatgggct gatgtatgaa tttgttgttc ctccaagcaa
      601 ttttactgat tttttaaaga acagttttac gtttcatcta ttgagtaaca catcaaacag
      661 ttatcttagt agatttaatg agcattcatg tatgtcttta ca
//
LOCUS       KCPA01001115             546 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 122342tic ultra-conserved element locus
            uce-7946, sequence.
ACCESSION   KCPA01001115
VERSION     KCPA01001115.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 546)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 546)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="122342tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>546
                     /note="ultra-conserved element locus uce-7946"
BASE COUNT          125 a          153 c          117 g          151 t
ORIGIN      
        1 attatcacaa ctaattgcct cgttgttatg gagcagcctg aaactgtgtt cagatgtccg
       61 tctgtggtag caaattaggg ccacatcagg ctattcctgc gatcacaagg ggctcttgtc
      121 gagcgatctg atttaccctg cgcctggcag cactctgccc aatcaaagcc ccctctacaa
      181 aggcagcttt gaagccagca cagcctagaa acccgctcca tatgcaggcc ggcagactgc
      241 acttcattag gcctgttgtc acattttccc tcttcttatt ctaatgatcc tattttaata
      301 cacataggaa cctctcctaa ttgatgtcaa gtgagtgact tccacattca tcaccggcgc
      361 acatcaaacg cggacccgag gcaactatgg aaagcaggta tttcggcatt acctgtttaa
      421 ttgggattgc gcggccgctt ccaatgctgt ctgttctgct ctccaggacc ttcttctctt
      481 tgtctgggtc actccctttc cgagactgca gagcggaaag tttgtgctct attgcacaca
      541 caggat
//
LOCUS       KCPA01001116             654 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 122452tic ultra-conserved element locus
            uce-80, sequence.
ACCESSION   KCPA01001116
VERSION     KCPA01001116.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 654)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 654)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..654
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="122452tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>654
                     /note="ultra-conserved element locus uce-80"
BASE COUNT          212 a           95 c          111 g          236 t
ORIGIN      
        1 tggttgattc ctgaacaaaa caagtgatgc attacacatt tgtctagaga ggatattacc
       61 tcttacatgt ctcctttatg tattgtttta cccttagaag gagtagtact tttctaatat
      121 ttgagtgaga aagatagttg ttaaaaaaag aaatttatgc tgaaaactgt tctagaaact
      181 tggatagaaa agtcagttga tagaaatgtt tctcactctt aaatctctag ttgaagttca
      241 tttgacaaac ctattataaa atgaataaat gtagctctgt gtgatttgtc cattgtcaac
      301 atgttaacac aatttatttg aaggtagatt gatgaaggat ggctgaagga gtttaccctc
      361 ctgagttaaa gaatagaaaa tcctttttcc ttagcatttc tctttttttc ttagaagttc
      421 acaagagtag atatacaatt atcctcgact tgctgatgca aaggaacaga gcatttagtt
      481 tcttgtcact gtctctgaaa ttcctaaagg tacaattagc atttcatttg acataatgtt
      541 gaaaggttca tagattgatc ttccctaaaa tgcagcaaga attttttgaa atgcaaattt
      601 tgacatttat taacttttat tccagatctg tttatagact gtaaaactgt gcat
//
LOCUS       KCPA01001117             615 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 122562tic ultra-conserved element locus
            uce-5224, sequence.
ACCESSION   KCPA01001117
VERSION     KCPA01001117.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 615)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 615)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="122562tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>615
                     /note="ultra-conserved element locus uce-5224"
BASE COUNT          201 a          130 c          116 g          168 t
ORIGIN      
        1 ggccaagaga aacgcactaa tttataagtt gaagcaagcc ttgagataat gtcacccacc
       61 attcatccaa atttgtcact agcatcccat taaagccata attatttttt aattaaaact
      121 aaggaagctg gcatgtgtgt gcctacttta tacatctgtt atgggttaaa atagctttta
      181 aaaaatgttt ctttagaccg cagtcttttg tggccatggc ctatgccaaa gaaaacgcaa
      241 acttgcttat tttctccatg gggcgcaaca ctgcctatgt gtgcctgaac agattcgact
      301 ggccgtgaaa agaattctaa ataaaacaca aacatggaat ttggcaacgc cacagaagcg
      361 agcttaagac taattccagc atgcggacgg ctctcacaca gcaagtctgg ctccactata
      421 aatgaaacca ggctctgtaa aatcgccagt aaagtttgag ttaggattta aagagacagc
      481 actcttattc caaggtttaa gacacacacg tccacgcgca cacacagctt attaaggaga
      541 ttcatgctgg ctcagtaagt ccaaagtgtg tttattttca gcagtcattt ccatattaaa
      601 aaatgtgaag ttaaa
//
LOCUS       KCPA01001118             642 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 122674tic ultra-conserved element locus
            uce-6152, sequence.
ACCESSION   KCPA01001118
VERSION     KCPA01001118.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 642)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 642)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="122674tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>642
                     /note="ultra-conserved element locus uce-6152"
BASE COUNT          211 a          118 c          105 g          208 t
ORIGIN      
        1 ccaagtctaa tgggttaaat gcttattata ccactgtctt atttgtaaca taaggcacct
       61 actacaagcc cactcttcat gcaaaattgc caatttatag caatattcct tgtttagaaa
      121 acaaggctat ccaaacacta taattacaat atgcaccagc aggcataacc ctgcattaat
      181 gcacagactc cagatacatt cgtcaaatag agtttttttt ctctttgcct tcttctcagg
      241 gtacttttaa gttcagggac agagaacatg tcttcattag aaacattaac attcacaggc
      301 tgtagtaaat tttgacagtg aaaaggtctc tgtaaccttt agttgtgcag aaatttactt
      361 cccaagaaaa ttacagctgg cactgtctta attaatgcta gctttctttt ctgaaaattg
      421 tgggcttgtc agtaaaaaag gcagaaaaac ctgagtttaa aagactggac acaaaagacg
      481 cctggaaata aagccctgca aaatttcata atattgctct gtttttgttc tacagtaagg
      541 agatgaaaag atctaatttg attttgccaa atggagcaac atatatgtaa tatagaaatg
      601 atttgcattc tctcttttgt ctttgagttt tatcatgtaa ag
//
LOCUS       KCPA01001119             678 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 122784tic ultra-conserved element locus
            uce-5100, sequence.
ACCESSION   KCPA01001119
VERSION     KCPA01001119.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 678)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 678)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..678
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="122784tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>678
                     /note="ultra-conserved element locus uce-5100"
BASE COUNT          196 a          127 c          161 g          194 t
ORIGIN      
        1 caagccagat gggactggca gagacatgtc aaggaagtgc tgaaaaggtg acttgggtct
       61 ctggcagcta gtctggagct catttctatg tgaaatctct gggggctcct gctttgcaat
      121 ttctcaggaa tgtttaattc tcctcatccc tttgctgagt ctctctggag aggtcatgga
      181 ggcctgtgac atccctggag ggcactgcct aactaaatta gcatgagata actttggact
      241 ctcttccaaa caagaaaata caagggagag aatttcatta aaagcagagg actaggtgat
      301 ccaagttaat cccagcccag agctgctgca gaaatgttct ctgtttatat tttgacttta
      361 ctctctgtta cagagttcac tgactataat ggaagctgtg ttaagtgcac aacttgacct
      421 cagttgacca aatcttagtt tcataataaa gaaaaagtgg gctaggcagc tctaaaaggt
      481 ctgattagtt accgttttgc ctgtgtgtga ctatgtaggg caccgagtga atggtaaaag
      541 ataagcagtg atgtattaga tgagcttttt aatcaagaaa cgtgaacaac actattacag
      601 tcatacgtgt gcaagttcca tttaagactt tatctacgtt ccttcaatgc atgatgggac
      661 aagttggaga agagggaa
//
LOCUS       KCPA01001120             520 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 122894tic ultra-conserved element locus
            uce-4172, sequence.
ACCESSION   KCPA01001120
VERSION     KCPA01001120.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 520)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 520)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..520
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="122894tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>520
                     /note="ultra-conserved element locus uce-4172"
BASE COUNT          152 a           97 c          127 g          144 t
ORIGIN      
        1 tgttccttat tttaaaaaca gagaggcaga cggggcaagt ttaaggcaag acccggggaa
       61 aatctaacgc gaaggtagaa agaaaaattg agcttattta tacagtaaca cgtgagagta
      121 atgcctccct tcctcggctg tgcgctcccc catcttctct ctcacacacg tatatacaca
      181 cacactttaa ctgtgctttt gtgttttgtc agaattaatg agaaaagttc ccttgcccta
      241 ggggtaatta gtgtccttgg agttaaataa gctaatactt agacacctct ggcacaggca
      301 attatgtttg tgtattgaat aattgattca aagagggggg gaaggggctg ctaatcagat
      361 ctgagcataa tgaattgatt taattaacag gggaatctga gggtccctgg gaaatgtgtg
      421 catttattca gcagcaggag agagtgcaaa gcacataaat tgagcgagcg aggcaggcgg
      481 caagtgcttt tgctttcagt gataggttca catctttcct
//
LOCUS       KCPA01001121             460 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 123003tic ultra-conserved element locus
            uce-4394, sequence.
ACCESSION   KCPA01001121
VERSION     KCPA01001121.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 460)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 460)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..460
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="123003tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>460
                     /note="ultra-conserved element locus uce-4394"
BASE COUNT          170 a           71 c           88 g          131 t
ORIGIN      
        1 tttcagagaa gtgatcatag aacctaatga aatgcagata agtgcattag gcatgcaccc
       61 tcttatcctg tcatttaaaa ctcaaaatca atctgagtta ccttaagtgg caatactgtg
      121 tcttaaatcc ttgattcatt tgttgtgaaa tatagtcaaa ataataattt gaaagggaaa
      181 tttgaaaatg tcagatagta aatgcatatt ttacttattt taatgtttgc tgatttgagg
      241 ctttgagggc aacacgataa atattcagtt tggctggcac aaactgtgca ggaatctaat
      301 agaaagcaat attgttgaaa atggatatca attgaaaaca gagagcagtg tcaactattc
      361 cccactggga gcagacaaca ataaaaccag tcaagcatta cacagttgag cctgccaaat
      421 gtcattagag tgtagaaaaa aagtaaaggc acatacgaag
//
LOCUS       KCPA01001122             418 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 123221tic ultra-conserved element locus
            uce-7021, sequence.
ACCESSION   KCPA01001122
VERSION     KCPA01001122.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 418)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 418)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="123221tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>418
                     /note="ultra-conserved element locus uce-7021"
BASE COUNT          142 a           82 c           72 g          122 t
ORIGIN      
        1 agaaagtcat tggccaactc agacccttct ctccactctt caatagagtt gttataaaag
       61 aagaggaaaa tattagctta aaaacagatt taagcaatac agaaggagtt agactccttt
      121 tgtttttcca actaatactc ttgcatagct taaaattatc ctgacagaaa aacaattgag
      181 gcagctttta aactaataac acagtcccat ggataatttc ccctaaatag cacagagatg
      241 tgactgaatg atcctatata tcattgtggg aagcaatttt cctcaatgag ttctacctgc
      301 tggatattgc aatgcattac agagagtgaa atcagattca aactggcttt ggagcaaaac
      361 ttacaccctg aggctggaga gctatgatta taccctttga ttcacagttc cacatgtt
//
LOCUS       KCPA01001123            1004 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 123335tic ultra-conserved element locus
            uce-717, sequence.
ACCESSION   KCPA01001123
VERSION     KCPA01001123.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 1004)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1004)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1004
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="123335tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>1004
                     /note="ultra-conserved element locus uce-717"
BASE COUNT          313 a          200 c          185 g          306 t
ORIGIN      
        1 taacacctca atatataaca aaggacatcc tgaaatggtc attgcaattt caaatgaatg
       61 acatcagtac accacattgt caaaaggaat tatccacaaa accaaggcat ttgaaagctg
      121 aacttccaca tggttacaga attttatgca gctgagaaac tggtagcaat aggaaataac
      181 tccacgcggt gttttacatg gacatgtttg aattacacat acaagagcct tccattgttc
      241 actctgctag tgtgagtata taattttcct gctgtctttc ccttttgttc ttttcatcta
      301 ttttgtgatt aacaccgtct gggaaagaat ttcagtattt tctctggttt agcaggatgt
      361 gagtgaggtg gtgctgctgc atgaatcttt taaaagcagc ctaagaaata tttaagacct
      421 tagtctagga ggaacagctc tcccaggcat aatttttggt gctggttgca gcagggagcg
      481 tatgctgtga ggaaagtatt atttttctaa atggaaggtg tcagatggtc acgcaatgtg
      541 actgcatgtt cgagatcact gcctcccatc tgcaatttgt gacgtgtgaa agattctgcc
      601 caaatgtgct caccaactgg aaaacctcgg cacttttttt ttcttatcag gagagaccaa
      661 gataaccaat ggttttacag atcagggatc ctatcaaatt aatatcattc taggataaaa
      721 tctgctttaa atacaaccac taaactccag caaagttaac tagtacatac aagttcattc
      781 aactgattaa aaatccctac tagtaaaaca agaaaataca catggacaag aaaagtattc
      841 tgctcctatc ttttagttga aggaaaacgt gacagtcttt tccagcacta attaatgcca
      901 cctaattata acacttacta ggctcaagcc aggcattaat atattgtgaa tagtttctcc
      961 ttgtccagct tcccgctgga tcacacaaga tgattgcttt ttgc
//
LOCUS       KCPA01001124             707 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 123447tic ultra-conserved element locus
            uce-1359, sequence.
ACCESSION   KCPA01001124
VERSION     KCPA01001124.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 707)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 707)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..707
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="123447tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>707
                     /note="ultra-conserved element locus uce-1359"
BASE COUNT          204 a          141 c          139 g          223 t
ORIGIN      
        1 aggtgactcc tggacagacc atgccttagg taatgttgag cagctaggtt tctgcattaa
       61 tgtacgggta ctgaacatta ttcaggatcc attatatatt tatccttaca ctcctttgtg
      121 gaaaatgatt tctgtaagta ccctgttacg gttatgaaag cctaaataag catcagtctc
      181 aaaccctttg acctgtctgc acagaatgga gatctgtttt gaaaaggcct cctttatatc
      241 tgtttttact ccatgccctt ccattcattt gcctatacaa agcaataaag ggtaaaacca
      301 aagtaacata aattggtctg tcttcctgaa tccatgtctc gctaatgtac ccagattaac
      361 tcaactgtaa attgtctcct ttggatgtcg tgtcttgcta aaagtttcct atatgattca
      421 tgatttggat tgcttttaac agctattggc taagcaatat ggtaaatgta caaggtgatg
      481 caattggcat tagtgagagg atgcacagga gcatgtaatg cagtcaatac tacattaact
      541 actgatgccc aattacagaa actggaagag tggcttttag gagcattagg acttgcagaa
      601 gagctgagat cacctgccgc tccttgccta aaagcttcac cctttactcg ctgggatcaa
      661 agcaaacatt tagttgctat tttgtcgtgt ataacaacga aggtatt
//
LOCUS       KCPA01001125             717 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 123559tic ultra-conserved element locus
            uce-6432, sequence.
ACCESSION   KCPA01001125
VERSION     KCPA01001125.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 717)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 717)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..717
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="123559tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>717
                     /note="ultra-conserved element locus uce-6432"
BASE COUNT          238 a          167 c          118 g          194 t
ORIGIN      
        1 aggttcttcc tccataaatg cactcatttc acttcatgct tctagcctat catagtttaa
       61 attgatagtg tccctctaaa aatcaaggaa cttaaaccaa gctattcttc acacatatat
      121 aaagaactct tgctgaaggg tcacttaaat gtctgttatt ttaaccaagt caatcaagcc
      181 ctacctacac aactgctgtg attatacgtt cccttagaca tactgcatac aatttatata
      241 tgtgtataca catatactca aatatggaac aaacagattg cagcctcaat cctatcaaaa
      301 cttacccaag ggtgttgcct gccagtctgc ccagagtttc agaaccagac agaaaccatg
      361 gggagtcact agtcctgcct ggcctggatg tccttcctgc ccctgagcca ctgctcaact
      421 ttgaactgaa agtaaaagat ggtaaatcag tcacaaaaca atcccaaatg ggttaagaac
      481 aaaacctgga atcccaggtt gaaattctca gggacttagt ctggtaacat accagcttaa
      541 gcaacaccct tggggaatat tccaaactaa tctaactgta aaagtggaaa gcatgcctaa
      601 cagaccttac gtacatcagc aatccataat agcacagtcg caaatacata ttaagctaat
      661 tagagttagc cactgtacta gggtatatgt acaaattgta atcagcaggt gttctat
//
LOCUS       KCPA01001126             814 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 123673tic ultra-conserved element locus
            uce-1206, sequence.
ACCESSION   KCPA01001126
VERSION     KCPA01001126.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 814)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 814)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..814
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="123673tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>814
                     /note="ultra-conserved element locus uce-1206"
BASE COUNT          269 a          147 c          175 g          223 t
ORIGIN      
        1 aataagctaa tttagatcaa gctgccatgc tgctttgtgc atgaccggcg tatacaaaga
       61 ttcattttgc cttgacatac tctgctgaat ttaggacaaa attttctaaa caaactgtta
      121 cattcctcgg acaaagaagc ttaacacttg cagcatgata acagctgaag catgccaaca
      181 aaaagctgtg ttaacattca tgttgtctga aacttaacac agtaaaactt ttagcaatcg
      241 gtgataaaat gaaaaccaaa gtagactgaa acaagtggaa aattcatcaa ggtctgatga
      301 tgcaatgttt ccagccaata taagtatact ttaacaactt gttctttact gtaatccaat
      361 tgttaacata ctgaaacaat tttggggcag ctcataagat tgatcgtatt cattagtatt
      421 ttttctgaca gatactcagg acgttacatt tacttctcag ctggaaacta tatgcaagtc
      481 tgccagatat ggcaaactgt gagtgtttgg ggagggggag gctataaagc tgttaaattg
      541 cctacggttc tgatacagca cagaacatct ggtctggaga gcttgaggaa acaccattaa
      601 ataggcagaa aagaaaaaaa tctttgtgct aagaaacagt ccaggttttg tatgcttctg
      661 tcagaggtat aaaaaaactt ggcaattcgt gtgatgattg gtcagtcacg tacagagcca
      721 gacacgctag caagcggggt ttgttagaca tctggtcggg ttccaccagc cccttccacg
      781 agggagggga gatgaaggaa taaaaatgaa gcag
//
LOCUS       KCPA01001127             640 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 123780tic ultra-conserved element locus
            uce-5331, sequence.
ACCESSION   KCPA01001127
VERSION     KCPA01001127.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 640)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 640)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..640
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="123780tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>640
                     /note="ultra-conserved element locus uce-5331"
BASE COUNT          175 a          143 c          175 g          147 t
ORIGIN      
        1 agacgagcaa gaggaattgc gagatgcttc ccttaactgg gagaaataag gcctttagac
       61 gtgttcagga gcagccgaga gactcccggc aggttggaga acggcggcac aaggacataa
      121 acagctcggg atgggaaagg agggaaacag caatcacagc gccgaatccc ggaaggggcg
      181 cggggaagtg gtcacaggtg attgtcatgt gtgataatta ttattactgt acacctgctc
      241 ctccgcacta attaactttg gatatgcaaa tcaatcctat tgcatcatgc ccctgctctc
      301 ctcccctaca gataagaaga tgttcagctg ctggatttaa ttaggataat gaacggcagg
      361 cccactgtgg cttggcaggg gaggagaggg gggagaagct gtgactgacc ttttctccca
      421 aaacgttgac attttctata gcttctgagc actccgagtc acctccatgg ctgggacgtt
      481 gataggagcg gattgatgag gtgtcattag aggagaaaca ccatggcccc agtgtttgct
      541 gggagaatac agcaggtgtt ctgacaagga cacaagccat cactgttatt tgccaaacaa
      601 ttctcttgat tcactaaagt caagcacgcc agcatttctt
//
LOCUS       KCPA01001128             714 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 123893tic ultra-conserved element locus
            uce-3656, sequence.
ACCESSION   KCPA01001128
VERSION     KCPA01001128.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 714)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 714)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..714
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="123893tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>714
                     /note="ultra-conserved element locus uce-3656"
BASE COUNT          241 a          109 c          125 g          239 t
ORIGIN      
        1 atggcaaata tagaaaataa aatagtgggt agagttctgc aaatggtata tgcattcaag
       61 tattatttta aaaatatctg ttctaagaag gcaaatatct ttgttttata ggtctctggc
      121 catctgaaga agtgctggct tactactgcc taaagcataa tgaaatattc aggtacagag
      181 ttaaacattt ttccaatctc taaattttat tgtatctgca tggtaattgc tatgatttaa
      241 gtcttcagat taaatttaaa atgttcaagg tgaaagcatg ttgctcttaa caaagaattc
      301 tgagctgcct ttgggtacta atattgcaca gcaagctttc tgctatatgt caaagacttt
      361 tgatttccac tcaaggcgtt ttatttcact ttgattttcg ggaaacaaaa gtgaagcacc
      421 aatcgatcag tgctgattgt gaaggtcagg aaaaataaga tattctttaa actgacatct
      481 gttgcaaaag caagaaaaat attatctgat gaaatacata aaaatcactg catatagtaa
      541 gaggaatttg cacttatatt taagtgtgaa actgttttga aacatcctta aacttagaag
      601 acagctatca aggcttctaa atataaaatc catcctgcat ctttctttcc cccttagtat
      661 actgagtttt gcactaggaa atccttgaag tttcattgtc tggaggatga atag
//
LOCUS       KCPA01001129             682 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 124002tic ultra-conserved element locus
            uce-234, sequence.
ACCESSION   KCPA01001129
VERSION     KCPA01001129.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 682)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 682)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..682
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="124002tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>682
                     /note="ultra-conserved element locus uce-234"
BASE COUNT          246 a          105 c          122 g          209 t
ORIGIN      
        1 aatcactttg attgtaacat cagttaatct aaaaatcctc tggccgtatt taacccctgt
       61 ctgcgataat gtaaagcggc aaataaaagc tagttcctgt aggaagtaaa agagatctct
      121 tctgaagcaa attccggaac ttcttaatta tacacagact tattatctgc atccccagtg
      181 ttataaagta ccagaacatc attagaaaaa ttaagatgga aaaatgaagg cgctactttg
      241 taaatttcca gtggaaatta gctggaagaa gcagaggaat actggatcaa aagagggtaa
      301 tcatgcttaa ctgtgcccta gagcacccgc atgtataata cgatttgcac agtaactacc
      361 tctcctatta ctgcttgttt ggagtattct gtgttaatgg ggttagctaa tttagtattt
      421 taacttaaaa agactctgct gattaataaa tgttgcacac tgtgctagta attaaaataa
      481 atggaagagt tacaaacaga agttgaattg ttaagaaaac attatctgaa aatatatgat
      541 aatccctgtt tatcataata caataacagt ccggaaaata tgcaaattgc tgaagttgca
      601 aagcatatga caaactaagt ataatttgaa aaaagttttc agatgtgttg tgtttttatg
      661 acataaaatg tagtagccat tt
//
LOCUS       KCPA01001130             530 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 124114tic ultra-conserved element locus
            uce-861, sequence.
ACCESSION   KCPA01001130
VERSION     KCPA01001130.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 530)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 530)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="124114tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>530
                     /note="ultra-conserved element locus uce-861"
BASE COUNT          174 a          100 c          103 g          153 t
ORIGIN      
        1 ttgcccagaa gtgctctaat taactgtacc aaatggccta ctccactgtc atgttaatgc
       61 cttctatctg gctgtttgct ggccatcatg tatcattgtt cagcaaatga cagcagtcag
      121 gttattaaag gtgtagatat taaattaaca gcagtggtaa acattgtagc tgtacttcac
      181 atctcagcag agccaatgaa gtggatgaca ctgcatccat gctgatatgc tgcgatgaca
      241 gatgggcgtc atttaacaca atacatcagt gggcaaccca cataccacag ctgtcctcca
      301 ctaaatgaat tagatcaggg taattaatct aaggcagaaa gtattactaa agtgggtcct
      361 aagcgaaatt agaaatgaat gaaatatcct gttaggctca ttgcagcatg agtatggaaa
      421 tgattattaa gtattttaat ttgacacaca tctcttagtg tgaaggatat ataataaaca
      481 ccttttttgt caccaggaaa acaagatttg atactgagaa aatcctatca
//
LOCUS       KCPA01001131             484 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 124222tic ultra-conserved element locus
            uce-7046, sequence.
ACCESSION   KCPA01001131
VERSION     KCPA01001131.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 484)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 484)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..484
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="124222tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>484
                     /note="ultra-conserved element locus uce-7046"
BASE COUNT          160 a           77 c           77 g          170 t
ORIGIN      
        1 cagtttatca agcagaaatt tcaagtacgt attttcagtc taccaatgat ttgattttta
       61 acttacagca tttattgcta agaatcttag cagtgatgag gataagcaat gtagcataac
      121 acattgattt tatgcagatc atcaccttta tgttttggga ggtctgctgt attagtgata
      181 tataaaaact gattactttc tccaacattg cctagtaatt gtttattatt ttcctattag
      241 acaaacaaga aagatcaata ttcctgaaca ccaaccagac tatgagtaac atcactgtaa
      301 atagatttgc ctcagacctc agtggtgtat tcattttaat gatttagaca atgtgagtcc
      361 aatgacaaag cgctcaagct aagtttaaaa ttaaattaag aataggaatt gcttactttg
      421 ttcctttgct aattgatagg gccttgtttc tttgccatta attcctagga aatagtataa
      481 aaat
//
LOCUS       KCPA01001132             607 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 124331tic ultra-conserved element locus
            uce-4525, sequence.
ACCESSION   KCPA01001132
VERSION     KCPA01001132.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 607)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 607)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="124331tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>607
                     /note="ultra-conserved element locus uce-4525"
BASE COUNT          182 a          125 c          117 g          183 t
ORIGIN      
        1 cctttggctg acacccaaca aggctattag tttaaccatg ggatgcacta ccaaatgtac
       61 aagagtcagc agaacttttc cttctgaaaa ttgcttgtaa ctttctgtga agaagccttc
      121 gaaaacccag aaagaacaga cggaaaaatc aggcaacaag gggctgactt attggcttcc
      181 gataactggc atggcttcag cttccagttt cttttcaaca atgtccgctc actatagcaa
      241 ccccagatcc catttaaatg tcatgctgcc ctctgttcta taaacatgta tcatccatca
      301 ctaaatattt agatctgaat tgttggagct gagttctgtg ccaggggtaa ggggattaat
      361 tcctttcaag gccctcacat gatggatttt tcactgaagt aaacatccga gaagagctca
      421 cactacggcc ataaaatata taaataaagt ttaaagttta attaagtcaa cattatttaa
      481 agtggttgtc atattttatg gtgaactctc tgtgtttatt ttgtatgact cctcataaat
      541 agtctctccc tttcagacaa aaggcatggc tgggttaaag ttaagggtcc cttgcatggt
      601 atgggaa
//
LOCUS       KCPA01001133             493 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 124439tic ultra-conserved element locus
            uce-1488, sequence.
ACCESSION   KCPA01001133
VERSION     KCPA01001133.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 493)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 493)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="124439tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>493
                     /note="ultra-conserved element locus uce-1488"
BASE COUNT          167 a           99 c           89 g          138 t
ORIGIN      
        1 tttctatctg tacttcaagg gaatgtgtat gtgcacatgc acgtgcctgc acaagcacac
       61 gctgaccctg acttacaatt aagacaaaat ggcaggctgg tgacaaaact cagcaatttc
      121 caattgcaca gtcaccctgt aacgggaaga actgtttacc ccatgttcct tattaaactg
      181 aagtatttta tttaatgagc atgactcatg caaggtgttc ccataaatca tcagctggtt
      241 tacaaactca ataactaggc ttcctgctat aactaggctg tgcacacctt aaattattaa
      301 cacgctaggg ccttaaggca gatctttgat gatgatgata taaacactgt gaggacaagg
      361 tgctctctca gcaaaagatt attgactcta attaccattt accacaggaa aaagaaaaga
      421 aaagacaata aaatatgagg gagaatttaa atctcagatt taattttatg aggagtttta
      481 aactcccaaa ctt
//
LOCUS       KCPA01001134             439 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 124545tic ultra-conserved element locus
            uce-2850, sequence.
ACCESSION   KCPA01001134
VERSION     KCPA01001134.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 439)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 439)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="124545tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>439
                     /note="ultra-conserved element locus uce-2850"
BASE COUNT          139 a           82 c           94 g          124 t
ORIGIN      
        1 gtatgcgtgt gccgggagta cacagacggg ctactaacat ttgcagccgt aaataacttg
       61 gaagctgctt ttaaaaacca caggttaaag gatgagggat gccatgacgc acacagaggt
      121 tgagatcaga gaagcagcta aaaggggtca ggagaaacaa tgaatcccct tgttctgagt
      181 catatttatg agtgctccat tgcacctaaa gttcatattt attggctagg ccatggggtt
      241 tccccatttt ctcatctctt aaaataacac ccctggttaa aatttcctat aaaacacaga
      301 aatactacag caggcagaac ttgtcaaccc tgacaactac attatttaag tttgtgggtg
      361 gggtacatca agcaagaact ggtttgtgtt ttgtactgaa ttatgaattt ttttatacaa
      421 aacatgactg taatataag
//
LOCUS       KCPA01001135             526 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 124655tic ultra-conserved element locus
            uce-1378, sequence.
ACCESSION   KCPA01001135
VERSION     KCPA01001135.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 526)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 526)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..526
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="124655tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>526
                     /note="ultra-conserved element locus uce-1378"
BASE COUNT          142 a          117 c           74 g          193 t
ORIGIN      
        1 aggttttaga acaggaccta ctatgaccaa ttatattatt cacttgagcc actgtatgat
       61 ttatagcaca ccagcgtgtt ttgttcattc ttgctctttc cttcgccttg tctctgaaaa
      121 taattgtttc atggctgtat gctcttattg ctgagatatg actgaaaact gcatgcaata
      181 cagtgaagca cattcatttt catctagtac ccgtttattg ccttgagcac tgtaaatctg
      241 tcagctcttc acgatgcttt cacctctttc ttcatttgct ccagcttcta gtttgacaat
      301 gttcccctga ggcagaattc taatctgctt ccaattagtt gcaaaatgtg actcaaattt
      361 ccacattatg gccgcacaca tctagaaaca aattaatgct cttgaatatt tatttttgag
      421 ccttctgatt tagaaaagtt gccaactaca ttcaaactac atccaagatt ttttctcaaa
      481 atgaaatatt tctttttcaa atgcttttca cagacccttt tcaact
//
LOCUS       KCPA01001136             428 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 124754tic ultra-conserved element locus
            uce-7191, sequence.
ACCESSION   KCPA01001136
VERSION     KCPA01001136.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 428)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 428)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="124754tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>428
                     /note="ultra-conserved element locus uce-7191"
BASE COUNT          139 a           83 c           73 g          133 t
ORIGIN      
        1 atattcatgg aaaatgtgca atgtcctttc ttttgctcta atcttctgta ttacctgtac
       61 aaagaacaag gatttgcacg ccccctcttt ttttttggct tatctatgct gcagtcctac
      121 tgtcattgtt tgattctgct taaatccctc tgtacctaaa ggtacagcct tatcaattga
      181 aaagctaatg ctatataaga agtgaaaaga acacagaaag gtttcctagc aactactgtg
      241 aatccttcta aagtaagtca gttaaaacca tgtagtacgt gcaaagggtg taaattaggg
      301 agctaagctg atcctcagat ttacagatgc ccactataaa gtacaataaa acccgtaata
      361 gaaggtgaat tgctcaagaa gaaaatcaca tcagtcttga cagctttatc attatttaaa
      421 tgatccag
//
LOCUS       KCPA01001137             519 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 124862tic ultra-conserved element locus
            uce-4990, sequence.
ACCESSION   KCPA01001137
VERSION     KCPA01001137.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 519)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 519)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="124862tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>519
                     /note="ultra-conserved element locus uce-4990"
BASE COUNT          173 a           99 c           97 g          150 t
ORIGIN      
        1 aaacatagct ctgaataaaa atggcattgc tttgggtgtt tacagcgctg gagcactgtt
       61 tggtttgtca ctgtgtttaa ccactgctct aaagccagca aagtacatta ctggtagtaa
      121 cagctcatga aaaatacagc gaagaaactg ctagtggcag aagcatttaa ctttcttgtt
      181 agcagcctcc cccatgtggc actttagcac cagcaagttg tttattatgt tctgtgccag
      241 gcaaaactga ttaaatgggg ctcttaagaa tcaaagcgtt ataaattcat ggaaatacag
      301 caagcaataa attccatgga attaaaagct tactagtgct attagcattt cagggtgttt
      361 gcattgttaa tagtgatgtg caaaaatgat gttcctataa gacaaggcaa accaacagaa
      421 catatgcttt agctgctaca tttttatacc atgtcatcat caatggcaat ttctaaaaag
      481 ctcattaata aacagaacca aaccaaggat ttacatccc
//
LOCUS       KCPA01001138             432 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 124972tic ultra-conserved element locus
            uce-7324, sequence.
ACCESSION   KCPA01001138
VERSION     KCPA01001138.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 432)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 432)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="124972tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>432
                     /note="ultra-conserved element locus uce-7324"
BASE COUNT          150 a           82 c           73 g          127 t
ORIGIN      
        1 aggccaaagg agcccggccc tctacatccc cagtttacag tggtatatat ttgcttatgt
       61 actaactaat attataggaa gcaacacagg gaagtatatt ttgcgctaaa attgggaatg
      121 cactttcaaa tatacttaac aaggaaattg aatgtcttat taaatccgta ttatcaaaac
      181 actgttcaaa aatttaaaga aagtagcttt tcattttatt catcgaggaa tccattaaag
      241 cctaagctct gaagtagtat gtaaattatg tgcctttcaa ggtagagcta gggcaaattc
      301 actccatcaa ctaatgatga acctcattat gtgcagggag tattcataat gaggaaacaa
      361 gccacccgcc attccatgtt ctaacataaa tccctgtaaa atgtgaatat ctccacgtct
      421 aattaaaggc ta
//
LOCUS       KCPA01001139             547 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 125077tic ultra-conserved element locus
            uce-3811, sequence.
ACCESSION   KCPA01001139
VERSION     KCPA01001139.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 547)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 547)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="125077tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>547
                     /note="ultra-conserved element locus uce-3811"
BASE COUNT          165 a           92 c          107 g          183 t
ORIGIN      
        1 ccatgctggg taatgcttgc taattaccca caacaaaagt agacacacaa tgctggtaaa
       61 ttacctgacc ctttgcattt taatgagaca acaaggattt catgaagtga tgttgtttca
      121 gtggttaatg gtgtcagcaa tgttgtaatt gtaggctgag gcacattagc tgcacaacca
      181 catgtaggaa gggcttctct caacaggccc tttggagaat agaacagggt attatcatta
      241 agcctatgtc atttgcatgc tgctaatcac ttactttatt atcttgtgta tccattgtct
      301 ttctttaatt gctctttaaa tgaaaattaa aaatagttcc agtgcccacg atacttgtga
      361 tagcatcttg attatgagga taacttcaag aaaatggaac atataggtaa tatattgcag
      421 gaatacaaga tagtttgaaa gtaatgtacc acagcaggca gcctcatgag tgtaattctg
      481 gtgtctttct ttgcttcact acgtattgtt tgcttaataa atggtttttt atattcataa
      541 aggtgat
//
LOCUS       KCPA01001140             739 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 125190tic ultra-conserved element locus
            uce-660, sequence.
ACCESSION   KCPA01001140
VERSION     KCPA01001140.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 739)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 739)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..739
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="125190tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>739
                     /note="ultra-conserved element locus uce-660"
BASE COUNT          229 a          157 c          124 g          229 t
ORIGIN      
        1 ctgcatactt ctttctctcc tgcaaatact tctgtggctg agttaaatag acagacacat
       61 gctaataaag gggcagtttc taaccacgga ggtgaaaatg ttctttgctt ttgagggctg
      121 acaggtcctc atatgataaa cctgtcaaaa gtgctaccta acattgttgt ctgattcgca
      181 atctgtttcc cagtaactct gtctgagtag aagcaataga attaattata cttcattttg
      241 ctgtctttaa cagtattgac caaatttaag aacaaatgag aagcgcttat caagcttgaa
      301 gaaaataatc catcagtggc acaatttaaa ttctctgcag ttctcttatt aatcaaagta
      361 acacttacta tcctatcttc acttcccatt aacagtcatt aagcactgtt gctgattgaa
      421 gcaatttctt tagggatctc aacctcattt ttaagagaac cttctacagt ggaaaacaat
      481 atcatacagg aacagcaact tcaagagagg aagaaggttc ttcaatcatg ttctgacctt
      541 gacatttccc tgcagcagaa gttcactaag tacacaacca acatgctcta aacttctgac
      601 ttctttcttc cagcagcacc agtgcccctc tattaaccag ggaggaaaac accacttcaa
      661 aagatggtta tagcaagcag gttaagtgtc tttaattact gtattggcct gcatcagtga
      721 ttattattta tagagcctt
//
LOCUS       KCPA01001141             495 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 125302tic ultra-conserved element locus
            uce-2388, sequence.
ACCESSION   KCPA01001141
VERSION     KCPA01001141.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 495)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 495)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="125302tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>495
                     /note="ultra-conserved element locus uce-2388"
BASE COUNT          139 a           95 c           98 g          163 t
ORIGIN      
        1 gttaaacttt gaacttctat ctgaattccc tgcacagcct ttttagggtg tagatgaagt
       61 tccaaaatcc tttaataagg agatatctaa cagaagtact ctctttgaaa ccagcagacg
      121 tgaaaattag cagctgccag actaagaggt ttattattta tcttccctgt tgcagtgccc
      181 atgtggcagc actgatattg agcagctgga cagattgcac cctggagcca catctgtagc
      241 tgtatagatc aacactactt tcattgcttc tttatcttct gacgttagat ttactaccta
      301 cttcatgaat tgttacgggt tttcccttct tctcctccaa tttgattttg aaagcattct
      361 actgtaatct ggtactgatc attaacagtt ggttagttga gcatttgcat tagtagggat
      421 ttccagttgg gtttgcaaag atgaatccgg aatggtaaag agaataaaca tgattgcaca
      481 atgaaactgg gaaat
//
LOCUS       KCPA01001142             838 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 125413tic ultra-conserved element locus
            uce-3926, sequence.
ACCESSION   KCPA01001142
VERSION     KCPA01001142.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 838)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 838)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..838
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="125413tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>838
                     /note="ultra-conserved element locus uce-3926"
BASE COUNT          262 a          138 c          155 g          283 t
ORIGIN      
        1 tgcacaggaa accagagcag tttctgatct ctcctccacc taaaaaatta gaacatcaaa
       61 accagtttta ccagcaataa acgaagctac tttgaaaagt gaggcaaagg gatctatctg
      121 gagtcagtaa gacattgtta ggatctcttt gatcgggagc cttaaatgaa aattatcaaa
      181 tggcgcttta aaacatacac ccttttgttt gattagcctg ctgcagataa cctttattaa
      241 acctgatcta aaattacagc catgcactgg tggttctttg atgccttggc tgtttcattt
      301 cctgtttata ctatgataca cgttgcacta ggagataaag cacttctgaa ggatattaag
      361 acatgaaagt cccttggcta tttgctggca ctgttttgat gttttcttgc tctctagaaa
      421 ttagcatatc cttttcaaag actgcctctg atgagagtaa tcctttgcca tgatgtattt
      481 gctaaaagtc ataaatgata gtatattgtg taaagaaatg acacataaaa gggacgatgc
      541 tagattattg ataatgaggc aacttgtgca actctgcttt tggcttttat aaaacacatt
      601 tttgacacca taaatacatt gagcttatat taatgaggat ttaatacttc tgagatttta
      661 ggaacttgct tagaacaact tttcaaaaga aggggaagtt taatgttttc actaattttg
      721 ataagatatt ctgttaagca cgttttgctg ccttcataat gaggaatgat ggaaaggttt
      781 ttagcatggc tttgccagaa ttaaactatg ctggaatact tattttatta atttgtat
//
LOCUS       KCPA01001143             495 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 125520tic ultra-conserved element locus
            uce-2086, sequence.
ACCESSION   KCPA01001143
VERSION     KCPA01001143.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 495)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 495)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="125520tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>495
                     /note="ultra-conserved element locus uce-2086"
BASE COUNT          171 a           77 c           85 g          162 t
ORIGIN      
        1 gatgaaagaa ggaaccagat tccccagtaa caggtataga gttttagaga agacttcaag
       61 gcgaaaagaa aaaagcatag aatatactgt tatggtgtta tttttgtctt tcatttttat
      121 gacaacttat ttgtacttaa aggaatcttt ccaaagagtt aagaagcatc attaaataaa
      181 gactgtgaaa tgtgcaatat ggcttattta tttaaatgtt aattggtcca acgaacactt
      241 ctaattagct ctatatttgc ttagcaaaaa gttttacaaa ttccaattgt gaaaagcagc
      301 tattttgagc tggtaagcat gttgcagaat cagctatgat ttttctatag ttctcagccc
      361 ttgaaggcac aatttaattt ttcatgtatg catactagca acggtaaaca cttgcgagtg
      421 taaagaacct tctttaatta gctgcacaac aattaaagga ttcacaaact aaattgaacc
      481 ctgtctctgt gctta
//
LOCUS       KCPA01001144             536 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 125629tic ultra-conserved element locus
            uce-4386, sequence.
ACCESSION   KCPA01001144
VERSION     KCPA01001144.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 536)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 536)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="125629tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>536
                     /note="ultra-conserved element locus uce-4386"
BASE COUNT          159 a           86 c          104 g          187 t
ORIGIN      
        1 ctcttgtact tttgttgagg tcgtaagttt cagccagatc tttccatatt ttgccccagg
       61 catttgttcc actttcctct gacagtagac cacatttgtg gtattcctaa attaattata
      121 cttttccagg cttaaaatac tgtgacagat caacaaaaca gtagcagaaa actaattctt
      181 tcaaaaaata tgaaaaaagg aagttgtgta agatggtgta attaatcttg caataaaaat
      241 aattgtttac agttaaaatt aatgtaacat gcattcctca gcagataata aattatgggt
      301 tttctcatta gcatttgaat tgatttcctc taatttctga ggaacacatg agcatgtgac
      361 tagattaagt ttaattggac tacagctggc actgattgtg tgtggataga gtgggggttt
      421 tgactgattt ggcatcttcc tgcattgtgt ttcattgtcc ttcctgttca gccttttctg
      481 cacaggctat aagaagggga aagaaccttc tgaagtattt atagaagtag tgtgag
//
LOCUS       KCPA01001145             497 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 125738tic ultra-conserved element locus
            uce-507, sequence.
ACCESSION   KCPA01001145
VERSION     KCPA01001145.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 497)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 497)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="125738tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>497
                     /note="ultra-conserved element locus uce-507"
BASE COUNT          160 a           99 c           74 g          164 t
ORIGIN      
        1 gagcaaaata ccttatctgc atttctcttc caattccatt tggacaacag tatttcctaa
       61 atgtagccta ttcactgctg gatatgtaat taccttcagt tcatagtcta gacattaatg
      121 ctttcgtagt atttaagact tcttgtaaca tgcttgctgc tttaagtaag caaggctaaa
      181 tcttgaccag ataaattagc aaagaatgca ataaaagctg caataaaaga actttatcct
      241 ccaaaccttc aagttgctgc taaatgagat ttctttgaaa tgcagatcag ttgaactaga
      301 ttagtgaatt ttagctcctg tcaacatcat aacaaaatac aaatacaatt gttcactggc
      361 cttatctcca tgcttccatc tgctgccttg ttatttactt tccttgattt actatgcaga
      421 tctaaataag acacatcaag gagggcttac aacacaatgg cttcttaagc tttacatcaa
      481 ggtatttgaa actgaag
//
LOCUS       KCPA01001146             560 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 125844tic ultra-conserved element locus
            uce-128, sequence.
ACCESSION   KCPA01001146
VERSION     KCPA01001146.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 560)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 560)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..560
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="125844tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>560
                     /note="ultra-conserved element locus uce-128"
BASE COUNT          200 a          107 c           97 g          156 t
ORIGIN      
        1 gagaaaacat cagttgcttc tttgacaatt ttgccattca ctgatttact tctaatgaag
       61 acgcactcca accagccagc tcaaaaggtc aaagcaaatg cctcacaaaa tcaaggcaaa
      121 tgggaaaccc gtaaagaaac cttctcataa agtggcgtgg caattaaaaa gccgtctttg
      181 gtaaaaagta aaagaaatta agctgccact actgtaacag gttagatgaa aatcaaaatt
      241 taatgtattc tcccttgtgt cgtcttgttt tgtcaagaca tcaaatagaa ttggaaagta
      301 caaaataaca agcccttgag aaatcacaga agccgacctt tttgatgttg ttggtttacc
      361 ttgttctcag ttatttgaac aatgatgttt cagatttaag ggcaagataa agcttaaaaa
      421 ttaaaaagtt tggggaggat tgtccctccc aaataacaga gtatctatca atgaaggcaa
      481 atccatccaa aagtagtgca cagaacaatt agcaaaccca cttatttgtt ctatattcag
      541 tctagattct gtaacactcc
//
LOCUS       KCPA01001147             604 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 125951tic ultra-conserved element locus
            uce-7872, sequence.
ACCESSION   KCPA01001147
VERSION     KCPA01001147.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 604)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 604)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..604
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="125951tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>604
                     /note="ultra-conserved element locus uce-7872"
BASE COUNT          202 a          102 c          113 g          187 t
ORIGIN      
        1 gagaatttgt ggcatgtagg tctgagtagg agaaactgta gtttccaatt catcactggt
       61 gtttcagccc agagccccac atctcataag ctgctttgag cccatgcagt tcacagacta
      121 aaagaaatta aaaataaata ttaaagcacg taagaattaa atatcaccta ttcaaatagc
      181 aattatgccg ttgaaaacaa gatcaccaca cctgtacaag aaaagacaac caagcctata
      241 acatctgttt ggatccacct gccaagcacc tgttctgctg tttcaatgcc atttgattgc
      301 tggagatgta gaggctcttg tgaggtaatg agtgatttta cattatgcat gattgaaaac
      361 aggtgttcta atgctgtaca attcaatgca tgaataattc agtttgttta gagcaagatc
      421 tttaaaagaa atatggtctt taataaatat taaggttatt ctctgtaatg tatggtggct
      481 ggtcttttca gcattctcac tgatgaccat ttttgtataa ttttatgtgt aggaaataac
      541 atcgtgaaag gtaattatac ctaaagcaca taagcaatga aaattgaaag ctttctttag
      601 caag
//
LOCUS       KCPA01001148             480 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 126061tic ultra-conserved element locus
            uce-3891, sequence.
ACCESSION   KCPA01001148
VERSION     KCPA01001148.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 480)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 480)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="126061tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>480
                     /note="ultra-conserved element locus uce-3891"
BASE COUNT          155 a          111 c           82 g          132 t
ORIGIN      
        1 ttcagaaagg gcttttgaaa gcacgaccca tcagttctaa tttttaaaac ttatcctttc
       61 agtcaagact agaaaaaggc ccattccaac ttttatctcc actacaaagt gctgttatct
      121 tgggctgttg tcaggagctc tctctctttc tgctgacaag cagagactag agagataaga
      181 ttgggaacga atctcacttc tctgagtaaa taaataatca atactcatct aaatgtaaat
      241 gagaaagtat ccccctctga taacagggct cttatcaaac agccaatttt ctgcagacat
      301 ttggcctcaa ccaaatcacc atcattcagc cccagcctaa tggctaaaaa tcgtgactaa
      361 attgaaccga tcaccagaga tcaactaagt tcagccatgg ctactacagg ttcaaatgtt
      421 tggaatgcaa tttttccacc attaactttc aatagcaatg aagaatgcca cggtcagggg
//
LOCUS       KCPA01001149             761 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 126173tic ultra-conserved element locus
            uce-3331, sequence.
ACCESSION   KCPA01001149
VERSION     KCPA01001149.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 761)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 761)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..761
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="126173tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>761
                     /note="ultra-conserved element locus uce-3331"
BASE COUNT          241 a          110 c          145 g          265 t
ORIGIN      
        1 ttcaatgaag agtaaaagga acagtctccc tgcatagaat gcatttaaac aattgtctgc
       61 cacttttcag caacttaaca ttgttaaatt gccttttaat cactgtatga tatttgatat
      121 gtagcagtaa aatgtttata ctgcaaattg tacagtaaac cttcagttta ggagcaaatt
      181 aatagtctgg aactgtgaga atctgactgt atctgaatat tgatgatctc actttctgag
      241 tctctctggg attgggggtg tgaggtgttg atcattgctt ctcactgata agcaaaatat
      301 ttccagagcg tgaagaattc tgtggtgtgt gagaaggata aaccataatc tgcatcaaca
      361 cactaacttc tcctctgcca tttgcattga aaatcaggtg gaagttatgc taagctctct
      421 attatagcct catgtatgtg aaaggtcttc cccttcattt gaataaggcc tcttatgcac
      481 acatttaaaa ggaaggttcc tttaattagg gtggcattta gaattcttaa atgttcactt
      541 tttgtgatgc taaattgtgg agcattttca aatatgttgt agtagtcatt ttcattagcc
      601 acttttattt ttatttattt ttaaaaggaa attacatgct ctacaatatg gagtgaagga
      661 gtagattaat atgactagct agattaagga aaatttaaat cagagtgttt gatgaaatgt
      721 aggaaaatgt ttaaatatag gattagactt acaatataga a
//
LOCUS       KCPA01001150             568 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 126283tic ultra-conserved element locus
            uce-4902, sequence.
ACCESSION   KCPA01001150
VERSION     KCPA01001150.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 568)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 568)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="126283tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>568
                     /note="ultra-conserved element locus uce-4902"
BASE COUNT          188 a           84 c          100 g          196 t
ORIGIN      
        1 aagttgccat cttagtgtaa ctgctagtaa atacagcagc tattttataa gtattgctgt
       61 cattttcttt gactaaagtt acagaaattc tttgaatttt atatagggga ctaaatttgt
      121 aatggaaaat gatgtttgat ggtgtttaaa tgcagagtat gtcactgtat aaagcatagg
      181 gctcttttaa gttatttttt ttaacttctt gacatgtgtc acaatttgga attctgctct
      241 catgggataa atgccagatt acatggtgta gtatttttat cctctgtact ttcactgtag
      301 aagcatacaa catcaaagaa gaggcagatc actcacatca gcagaaaatg gaataggact
      361 ataatatgct tgctttgatc tctccttcta ataattatct tggctacatg catacattga
      421 aagtaagatt tgaattaata aggccaagag accctggaaa atgcaataag gatatctgaa
      481 tactaacttt gactatcttt aacaagataa actgcaattc agcctacaaa gttgtggatt
      541 gttaatttaa ggcaataatc cttaaatg
//
LOCUS       KCPA01001151             754 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 126375tic ultra-conserved element locus
            uce-378, sequence.
ACCESSION   KCPA01001151
VERSION     KCPA01001151.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 754)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 754)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..754
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="126375tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>754
                     /note="ultra-conserved element locus uce-378"
BASE COUNT          236 a          126 c          124 g          268 t
ORIGIN      
        1 ttctgttggt taaaggcaat ttcaacatag ttttttgtag ctttaatgca atgtggtttt
       61 ttccctaaaa tgctggtgaa tacacaaatg cataaatttt tttttctggt tctctaagac
      121 tccttatttt ttcatagctt cagcagttaa ttatgtcatc aagataagag aaatcaaatg
      181 aagccagaag gaaggcaaag gacaacaaga ataagaaaga tggaatctgt cacaagcttg
      241 aattatgaat ataattatgc atgattattt tatactgcaa agatgttccc tttttctgca
      301 catttataac taatctaaat aagtagcttg ccggcagaca acgtatttca tgatttatat
      361 aaaatggtcg agataaggtt cacgactgaa ggaaatatga ttggaggatt tttatcagcc
      421 tctgcatgaa ttactgtttg aaaatgctta tgcaggagca tttcattaat catttaatca
      481 taatcctagc aggatgtttg aactgatttc acaaataccc tttcatttca ctacttcatt
      541 atgctcgcta atggatccaa tatattatat atatcataaa ttatatcaca tcttcactga
      601 ccatgtaggt cactgtcact aagcattcct ccgtgcttag cttggtagtt tagcaaatgt
      661 tgctccagct tacttttgga atttcacttt ttgccattta ctgcaatttg aagttttctt
      721 atcggtcagc ggaggtctta attaaaagac aact
//
LOCUS       KCPA01001152             552 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 126475tic ultra-conserved element locus
            uce-3901, sequence.
ACCESSION   KCPA01001152
VERSION     KCPA01001152.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 552)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 552)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="126475tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>552
                     /note="ultra-conserved element locus uce-3901"
BASE COUNT          182 a           85 c           89 g          196 t
ORIGIN      
        1 aagattacaa gttatttctg gacctaaatg ttacatataa gtacttctaa aaattctagt
       61 tgtgtgacat tgtgatgaga caaaaagctc ctgagctgca ttttaataag catagaatct
      121 tttaaattta tcataaattt atatgtacag atttaaaatt tatacctggg gactttaata
      181 tcacacaatt catgttcaga tgtcattgaa catgtaattg tttctacatt tcacattatg
      241 ctgtactttc agattgtact ataaatcttt tgtggccgtg acggttattt cggaatgttg
      301 ctaacgctga tttatgctca ttcatgttac tttaatttga gcgtactatt tccaaagcag
      361 ccacttaatg cagctggtac atagaaagac atgaatatcc cataagttaa aaatttttac
      421 atttcaatta caacagcttt acaggaagtg gaactttctc cagtagatta aattgtaatc
      481 acaaaggtag gctaaatcat ttgtcagtaa gttatgcatt aacgtatctg tctttgaaag
      541 gtgaggaaac ca
//
LOCUS       KCPA01001153             558 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 126694tic ultra-conserved element locus
            uce-3603, sequence.
ACCESSION   KCPA01001153
VERSION     KCPA01001153.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 558)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 558)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="126694tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>558
                     /note="ultra-conserved element locus uce-3603"
BASE COUNT          175 a          103 c          102 g          178 t
ORIGIN      
        1 ttgtgtttct gaacaagcaa taaggctcca gccttagatg agaaaagctg ggattttgga
       61 actccctgtt ttctcttgga agatggatta aattgatcat tttttcctag acggagtgca
      121 cttcaggctc attttgcttt gtaattaaga agaaagccag aaacatcatt tacacattaa
      181 gaatttaata gatatatttt tctagcttta tgcattagca caggacagcc cattaatgaa
      241 ataagtcttc cttcagggtc aatttagatg ggctgtaatc ttctgcaaat atattgcaaa
      301 tgaggatcat ttaatgatct taaaactaac tgccagaaaa ggattgctat aactctccag
      361 acaacaaaaa gaggctttgg catgacttgc agtacctttg taattagcaa atgtttaatt
      421 tcaacccacc agatcataaa atttaaaata ttatcttctg gggaggtcag cttcagactc
      481 tatgacctgg ggtgttaatt ccgagaaacc tgaggttgtg tttgtcattc aataaacaac
      541 agctccagct cccttctc
//
LOCUS       KCPA01001154             654 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 126806tic ultra-conserved element locus
            uce-1285, sequence.
ACCESSION   KCPA01001154
VERSION     KCPA01001154.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 654)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 654)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..654
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="126806tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>654
                     /note="ultra-conserved element locus uce-1285"
BASE COUNT          173 a          171 c          127 g          183 t
ORIGIN      
        1 aaagctatgg acagaatggt gcggtgctct acaagctgct ctgagaccct ttatttattt
       61 atttattgct ttgggcacca gctagttctg ggccacaagg ggttaatcac aaaagctgct
      121 ttctctgcct tcactctacc tcaatttcca ctgctcccat caccttcctc ccccaccccc
      181 tgatcttatg aaaaaaaccc atcaaaataa ctattttatg tctccaaata tgcagatcat
      241 tttctttaat gaaagatgct tgacgtctcc gatccaatta atatgcaaat gcaggcgagg
      301 atttatttgt gacattctgt ctgggtgaga gaaaacaaaa aaggcctgtt aaccaaaaca
      361 ctaattgctg tgactgattg tcacatatca tcattttcat aggatctcct ccatccctgg
      421 cttgcaggga gctgtgaacc aggactcgga gactagcaga caccaaggag aaacagggca
      481 accagctacc tgcctggcac gctcggatga gctgaggcct ccttcctgct tcccctccag
      541 cttgcatatt tccccagccc aaccagcaga gatactcaga agcagctttt ttgtgctttc
      601 tgggcaagat attctgttat cctccaaaag tgaggagtta ccagtgtcag tctt
//
LOCUS       KCPA01001155             135 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 126902tic ultra-conserved element locus
            uce-6218, sequence.
ACCESSION   KCPA01001155
VERSION     KCPA01001155.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 135)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 135)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="126902tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>135
                     /note="ultra-conserved element locus uce-6218"
BASE COUNT           30 a           31 c           40 g           34 t
ORIGIN      
        1 atggcagggc ccagtgctca cctgaagcgt ttaaggtgca gccggaggac ctgaggtagt
       61 ctgtagatca gcaactgctt tttagcttca ctcagaacaa gaggtttggg agaagatttt
      121 cgccgtttgc ctgcc
//
LOCUS       KCPA01001156             721 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 127013tic ultra-conserved element locus
            uce-2109, sequence.
ACCESSION   KCPA01001156
VERSION     KCPA01001156.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 721)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 721)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="127013tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>721
                     /note="ultra-conserved element locus uce-2109"
BASE COUNT          212 a          136 c          124 g          249 t
ORIGIN      
        1 tttatctctc ttgctgtgga gatcaatcta tgccattttt ctccttctat agctttattt
       61 ttccttcttt gtccagcatt atcaaactat gacacaaatt caattatgat gttgtgatgc
      121 caaacctgtg gtcctggtaa agtgtatcat gcagcatatc taggtaagtg aattaaaaga
      181 gcatctgagc aggtatctgg tgtgtgtcac tgctcattct tccataataa actatgttct
      241 tcttctcatt catttgtcaa tcacagtaac taaagattat tatatgctgt atgtacgtga
      301 cactagcaat ttgcaaagtc tgttggcaag aaaatcaggt tagaatgaca gagtgagaaa
      361 ttaagcagaa gtctgatgta attagctata acaatcagtg ctctaatttc tgatttattg
      421 tttcctgttt tcctgctgct ttcagtccat gcatactgta tgtgcttcat ataggtcaac
      481 caattgtctt atcagtcctg gcaaaccaag aggtcagagt taacagtatt tatttaaaca
      541 tgcaggatgc ttcccactgc aattaggaaa taactactac taatagatct ttggtgctat
      601 ttcctcattt ataagataaa ggcaataggg acaggcttct tcataaatat ttcttgcaga
      661 tagatttact tgacgtttgt tgaactgaac acactgtcca ccaaacgaca atctgacaac
      721 a
//
LOCUS       KCPA01001157             359 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 127115tic ultra-conserved element locus
            uce-1568, sequence.
ACCESSION   KCPA01001157
VERSION     KCPA01001157.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 359)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 359)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="127115tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>359
                     /note="ultra-conserved element locus uce-1568"
BASE COUNT          101 a           55 c           71 g          132 t
ORIGIN      
        1 aaggacccca gtgagattgg acactgagag gtgcaccaga cttcctcctt ttgcttggca
       61 cttctctttt tattctttga ttaaagtctt tttcctttac ttacatcctc cattaagatg
      121 tctcagtgtc atttagggtg ttaattgaga ggaggtttaa gctcatcaag gcgattataa
      181 gtgatagtta aaaatttcta tatatggcct atgctggaat cagcacagta ggatgccatt
      241 tttcttttat ctaagtgaca ttggtaataa tagatgaaat tattactaaa tcgcagctgc
      301 agagatgata tcatgatttt tttgtgtaat ctttgatgaa aaattaattt ttgagaggg
//
LOCUS       KCPA01001158             363 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 127214tic ultra-conserved element locus
            uce-4753, sequence.
ACCESSION   KCPA01001158
VERSION     KCPA01001158.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 363)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 363)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="127214tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>363
                     /note="ultra-conserved element locus uce-4753"
BASE COUNT          115 a           48 c           68 g          132 t
ORIGIN      
        1 tatcttaaac tgtttgagat tgtactgttt cagcctttct tcttataatc tactagaaaa
       61 tattctagtg ggagtcttta atagtaccct tttgcccata gcgctctgat tttgattatg
      121 cattgaattg tgggtgaaat ttgggttaaa gataattgta aatatggtat tgatattaaa
      181 tgatgttttc ccaacattgc aataatgctt gttttgtttg ctggagagtt tattactttt
      241 tgatcaatag catgtgagat ttgtgaggga aattagcata gtgaataaca attaggagaa
      301 aaatcaatag cattcagaca aataagtgac ttgaaaaagt cccataggca cacatatact
      361 cac
//
LOCUS       KCPA01001159             421 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 127319tic ultra-conserved element locus
            uce-7490, sequence.
ACCESSION   KCPA01001159
VERSION     KCPA01001159.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 421)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 421)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="127319tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>421
                     /note="ultra-conserved element locus uce-7490"
BASE COUNT          140 a           73 c           72 g          136 t
ORIGIN      
        1 gcggtggagg gagaaatgtt attggttttc tcagaaggat tttcttttat acatagcttt
       61 atcctataat tttgtccctg ttgggcacac tgcctaaatt taaacacaaa cagtcaagca
      121 atgaagaaac attaccacat ttactgtgaa caaaaactcc cagttgtaca gtgaaatttt
      181 aatacatttc aacttatctc ttttactaat ggggagagta caaaccctgc aggaattcgc
      241 tctgcaaact ggtaattaca gtagactcac ttttttataa tgcatatgta tagtcagaca
      301 caagaaacat agctgccctt ttgatgtagg ttacaatagg aatgtttatg aaaatctgca
      361 attctaaagg aatgcattat ttcatgggaa gctgtccttt agctatacta aataatacaa
      421 t
//
LOCUS       KCPA01001160             362 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 127418tic ultra-conserved element locus
            uce-4455, sequence.
ACCESSION   KCPA01001160
VERSION     KCPA01001160.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 362)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 362)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="127418tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>362
                     /note="ultra-conserved element locus uce-4455"
BASE COUNT          100 a           72 c           79 g          111 t
ORIGIN      
        1 tgttcagtaa gcgaaaccag cacggctgta acagatgaga gtacaccaga aggggttcct
       61 gctccaaaag cccagtcaca tgcatccgac tcctttaaca tctcgtggac taagcctgag
      121 tatccgaatg gtaagtgaac tcttttagcc tcaagttaaa aagatgatta gtaaaggtaa
      181 attaatattc taaatggcag cttatatgtg gtgcttaatt tttaatgatc attttagcac
      241 ataaaatacc tgagatagta tcattgtctg cagctgggag attgtggttt tcagcccgtc
      301 ctgcggtttc agtggctcaa aagtgctccc ttttggtagt tcttgtgtac tgcatctcat
      361 tg
//
LOCUS       KCPA01001161             836 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 127531tic ultra-conserved element locus
            uce-7801, sequence.
ACCESSION   KCPA01001161
VERSION     KCPA01001161.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 836)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 836)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..836
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="127531tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>836
                     /note="ultra-conserved element locus uce-7801"
BASE COUNT          264 a          130 c          173 g          269 t
ORIGIN      
        1 gatgtttcac tgcttctgtc tgacataaac taatgatgta gactggctaa acctggtgac
       61 atgattaaac agtgatgtta attagtggct tctgtgagag acttgattcc tttagcagta
      121 tttgtcatgc acatacccaa gttaaaggga cttttcttta gagcatctgt taatagcatt
      181 aagagttcag aaaaaacatt taaattattt ggtaaagctc ataaggtcca tcttcatgcc
      241 cggtggttgt gcaaagacaa tatcttcgtg tgaagggaaa tggcaatttt ctgcaggcag
      301 taatcatctg tactattact taggtgtcat gtattgatga tcctatttca atcaaacata
      361 tctcattcag agagcttttg atgggaggaa tttttggaag ggtttaggaa ggttaaatct
      421 gcgagacatg gcttccatct ggaatgcatt agctacaaag atttattagc cagagtgcct
      481 ctgcataatg ttccatggaa agcaaagccc tgcatctaat ttccagcatg atgtctatat
      541 gagaagtgat ctttgaaata tcataggtga caatcaagtt tgttataaaa atagtaaatg
      601 cacaggattt tcatggcagc tattttaaat ccctcatgag ggctgctaag caggtagttg
      661 atttgttgac aaattataaa actgtagaaa tagcaacatg catgacattt ttaaacagga
      721 tagactcttt aagcagtaag agtcacatca ggaaaattat caacatttag tggttgctta
      781 actctgtgaa ggatggcatt aggaaataat agaggcaata tttaactttc tgtttc
//
LOCUS       KCPA01001162             696 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 127642tic ultra-conserved element locus
            uce-7521, sequence.
ACCESSION   KCPA01001162
VERSION     KCPA01001162.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 696)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 696)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..696
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="127642tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>696
                     /note="ultra-conserved element locus uce-7521"
BASE COUNT          224 a          111 c          121 g          240 t
ORIGIN      
        1 aaattggtgc ttctggtgtc aactacagta atgaaatgaa catataaagg aatcaggtcc
       61 ttgctcatta aattcaaaaa cgtattatta tttggctata aaccggttta gttaaagcag
      121 aaatcaaatt tatacagctt tcagaaagtt actggaacta aagtggctag tgatgtaatg
      181 tatgaagtca aagagtgttt tgctatgctg gagaaaacta atggaaacat tcacttgggg
      241 taagacaaat ggtattaaat gagaaaacac accatgaatt gcaaatggag ctgagttaat
      301 ttgttgctac agtagtgttg ccctactgtt aaatgaaggc tgtgtaatta tcttgctggc
      361 agagataatg tcaaaacctc atttctcctt acatgcctca tttttacatg agggctaatt
      421 gagctgcaag gtgacaactg attatatata gctatcatca ggtcctcttg ctcaatttgc
      481 aaataatgtt atctttttta agtgatgatt tttatcacat gtcaaattaa ggcattaaaa
      541 aaaattttta aagctacttt agttttgtag cattgcactt ctgtcaccat tttatttata
      601 ttaatccctc caagattctt gacatccatt tacttattat ccctttattt aaagcagaga
      661 gtgctagtca ctttttcatg cctcttgatc acaatg
//
LOCUS       KCPA01001163             749 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 127751tic ultra-conserved element locus
            uce-710, sequence.
ACCESSION   KCPA01001163
VERSION     KCPA01001163.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 749)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 749)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..749
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="127751tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>749
                     /note="ultra-conserved element locus uce-710"
BASE COUNT          250 a          161 c          133 g          205 t
ORIGIN      
        1 gaatatttca aaaagggaac tcaaagaaaa cagagaagtg gtcgttgagc aaatcactct
       61 gcataagtga ccatctcttt tccatgaaac acagggtaaa gcatgttaat gtaaagcaca
      121 gatattgcaa ggcagtgtag tattacactg cgcagggaga gccccgcagt ctgcagcagc
      181 ctgaaaccgt gcacaagtgc ttacagctgc agtgacatgg tgctaagcat gttttaagac
      241 tagtcccagt cgagcggcat cttatccaac cagaaacaat cccacaatcc agctcttttt
      301 aagtgatcat ccttgtatca taacagattt aggttgcagc tactttggat tatggttaat
      361 ctaaccttta tccattcaca tcttcacctg aaacttacaa ggaccaagag tcaattgcca
      421 gggcataatt cacaatgaca ctgatctctc cttcctcact ctaattatct ggattaagaa
      481 taacactttt gagtaattat tttcacattg gataaacatt aagctttcct ggatttatct
      541 gagctttttc ttaacatgaa atagatccga gcaggcttat aagaacataa ctgacagcgg
      601 tgacagctta atcaaggaaa ccctaaacaa ctaaaacaat aggaaatgtt tgtttcacat
      661 tgttttgaat aatcaagagc cagtaacttg ataacccact ggcaaactat ctactcttag
      721 accaaagcaa tatccaggca gatcaatta
//
LOCUS       KCPA01001164             617 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 127862tic ultra-conserved element locus
            uce-5710, sequence.
ACCESSION   KCPA01001164
VERSION     KCPA01001164.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 617)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 617)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..617
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="127862tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>617
                     /note="ultra-conserved element locus uce-5710"
BASE COUNT          214 a          116 c          116 g          171 t
ORIGIN      
        1 tgacacaggc tgcacctgaa tccaatcatt ccccgggctc ggagaagatt cacacgcgag
       61 gactaaattt gtcacaaatg ggttggtttc cgatcctcct gtagccaact tgctttattc
      121 tgacccccgt taaacaaatc aacttaatgg gcactgggag tgctataaaa cttaacaatg
      181 gagtgatttt aacttttaaa atatagttat gaagcaaaat gttggagagc tccttcaata
      241 ctggaaatca aattaaaact agacattttt taacagtctt gacagatata atcctagtta
      301 ccatgtaaat ttatggtaag ctgctgtgat attagccaca ggtgctactt ttaatatatg
      361 gcctgcatct ggctgggaat aaaatatctc aagaggactg aaaatgacct cactatcaga
      421 caatggagaa gccacaagac cactgtggca tataaaaagc tggagatgtg gtccacaact
      481 gaatatttac cataaaattc attttaactc tgcagattgt aagttaaagg atataatgtt
      541 ttcaatacat aaaaggcatg gacgtatttc agacaaacag ccaaaagaat aaggtggcaa
      601 aaatacactg cctatat
//
LOCUS       KCPA01001165             419 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 127970tic ultra-conserved element locus
            uce-7033, sequence.
ACCESSION   KCPA01001165
VERSION     KCPA01001165.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 419)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 419)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="127970tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>419
                     /note="ultra-conserved element locus uce-7033"
BASE COUNT          126 a           84 c           82 g          127 t
ORIGIN      
        1 tgagggctca cttatctgag ttacagcata ttccataaaa gtgattgtgc cctaatgata
       61 ccactgtcct ttagcaaagc cctggggcca cgcaaagtgt tcagtgccgt ggacagcagc
      121 tcatgttttg cacactgcct aaggcctaaa taggcctttc atacacaggc cagatgttca
      181 ctctttctta ggccagctta aggctagaac aaaccttttc aaccagggtt tatcagagtt
      241 tctaaattac atgctgggaa gaaatttaat tggtttaatt aagaaagttt atttcatggt
      301 aattcagttt tgttatgctg caagacttaa tgtgtcctct gataggagtg atttgttata
      361 aatattcata gcaatcctct tctcatccaa gccaaaaaga tcaagtagaa agaagcaaa
//
LOCUS       KCPA01001166             616 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 128081tic ultra-conserved element locus
            uce-7269, sequence.
ACCESSION   KCPA01001166
VERSION     KCPA01001166.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 616)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 616)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="128081tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>616
                     /note="ultra-conserved element locus uce-7269"
BASE COUNT          209 a          112 c          108 g          187 t
ORIGIN      
        1 ttttcagtat ttttctttta ctcttccttc caaaatgata atgaaataag ataaaataaa
       61 taaaaatatt aacttaaaag caaagcagga gagaaaccaa ttctgtttcc actgctgcta
      121 attttaatgc cacccattgt tcagctctgc agtctaattt tatgttaata tcctgaaagt
      181 tgtcaaatct tggcaaaacc tatgcataaa ttacacagaa agtagctcac aggaggggga
      241 aagtaatgac tgtcatggtt agccaaaccc attaatagtc tgacaagcaa taacccaaga
      301 gctctggtca actgctgcag acatctgtga aacttttgca attaattttt tttggaggag
      361 gtatcagctg tgaaatagca cataagtgac tgattattat cagctctgct ggtgagggca
      421 gaactgatca actccaagca ttcatccttc taccacatta ttggtttacg aataaaaagt
      481 tttagaggca ctctaatctc cagaaatgga aaaggaggag tagttgtaca tgaatagaac
      541 ttaaacatga tctttcatat cagcagtttc caaagaactt tacagaggtc attatcctta
      601 tctctgtctg taaagg
//
LOCUS       KCPA01001167             477 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 128182tic ultra-conserved element locus
            uce-4542, sequence.
ACCESSION   KCPA01001167
VERSION     KCPA01001167.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 477)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 477)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="128182tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>477
                     /note="ultra-conserved element locus uce-4542"
BASE COUNT          167 a           79 c           88 g          143 t
ORIGIN      
        1 gggctgaaat ctgtttctca actttgtaac atttaaatat caaaaacttt gttttctaat
       61 gagcgaagta ttgagggggg agaaatgaat tatatgcttg atgtatactg aaggctggga
      121 aaattaaggc catttcccat ggtgagaatg cagtgatttc agtttgtgag aataaattaa
      181 acctttggga gaatttgtct tccattaaat tgaacagcta aacaggcaca gaagatttta
      241 atgtcaccac cagcaaaccc caaaggttgc aaaaggaaac agggttttct gtttgaaagt
      301 tctctctacc taagaaaaga tgcaaactgt aaatgtatgt tgagacacaa agactcttaa
      361 agatcataat tccattccta taccatatgc tattaatgtc tgtcaacact gtttagccag
      421 caactgctga cagaaccata tttgctatct aaatacatca taaataaatc agtaatg
//
LOCUS       KCPA01001168             498 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 128292tic ultra-conserved element locus
            uce-1698, sequence.
ACCESSION   KCPA01001168
VERSION     KCPA01001168.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 498)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 498)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="128292tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>498
                     /note="ultra-conserved element locus uce-1698"
BASE COUNT          169 a           99 c           93 g          137 t
ORIGIN      
        1 atgatcaaag aagaaataaa tcttttaccc ttctttttaa aactgaaatc ccatttttta
       61 actggataac agctaagagg ctaccagcca cctatttttc tgggagctac atttgccgca
      121 tggatgcaga caaacgaaaa gcttttaaaa taaagtttgt gtaaaacata ttgtttggaa
      181 tttaagttct aatatctagg aataaacaga gcattaaatc aagcaaaact gtgacaaggc
      241 caatatgcac atggatgatg ccagcgaggc atctccagcc ctttgttcac agcttaacaa
      301 aactgtgccg tcacaccact ttagctcaac agtgcctgtc gaatgggcat cagcagatca
      361 gccaatgcct gtcacacaca cagctgaaaa actgtttgaa agcaaggctt actttagcac
      421 aagtctggta ggaaaagtga gagggatttt taatcatctg gtaaagacta cagatatata
      481 tttaacgtag ttttgctc
//
LOCUS       KCPA01001169             579 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 128396tic ultra-conserved element locus
            uce-2223, sequence.
ACCESSION   KCPA01001169
VERSION     KCPA01001169.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 579)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 579)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="128396tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>579
                     /note="ultra-conserved element locus uce-2223"
BASE COUNT          177 a          125 c          125 g          152 t
ORIGIN      
        1 gtatgaggaa gaaagagcaa gagagacaga cggagagagg gagagagagt gcaccaggaa
       61 ttatctatgc ataaagaaat taaaagagaa tatttttcca gagcaattga agcccatctc
      121 ctgaacaatg acgacagctc ctcattttcg acaacaatag agggcacgta ggagtcagct
      181 cattagaata tctgtggctc ttttctgttc tctctgcatt aagcccccat aatgtcagtt
      241 gtcacttatt aatgacaatt aactagtaat cagcagtgag actcttcgag gtggtccttg
      301 cctgacaggt gaagaaagag aacattgcgt agtgccatgc agtgacatgg aaccttcaaa
      361 gggagcacgg catttccata aattatttca gaaagaaatt ttcttttaga cattctcttt
      421 aaagcattag gatctttaac cctagaagga ctatacggtt gcagctgtcc tccctccccc
      481 ctccccttat cgctagtatt ggataaaatt ggaaggcagc ctgatctgtc atgtaaccca
      541 attcccatct ggggctggaa tagctatcaa cccactctg
//
LOCUS       KCPA01001170             675 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 128504tic ultra-conserved element locus
            uce-2477, sequence.
ACCESSION   KCPA01001170
VERSION     KCPA01001170.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 675)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 675)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..675
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="128504tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>675
                     /note="ultra-conserved element locus uce-2477"
BASE COUNT          194 a          155 c          108 g          218 t
ORIGIN      
        1 aacaagaaca acctccctgc ttctagcagg ttgaatgata acccttaaag gcatcccatt
       61 aaaagccaac aaaaagattc ttcacctctt tctcttctct cctctatccc cttaaaatga
      121 atgctgcaaa ttattagcca atgctggcaa ttggagaacg aagcagcttg catgtgggta
      181 tattttcaca gtgattctaa tctgagaaat ttacttgctc ttccccttca atctgataaa
      241 ctatacattc aagcgttctc attagtgttc ggatcaccaa agagagctgg agatgaatca
      301 gtccatccac ccctcctctc cctgctctgt cgagattatt tcattgaaat gttcattttc
      361 atccctgctg gcaacattag aatggaagta tttaacctgt ttccattact tatacaaatt
      421 accattatgg ggtaggacag atgttagaat catgccacat aactgacttc catacattct
      481 ttacgggagg ataagaagaa ggaaagctgt tagatcatat tatccagtct caataatgtt
      541 ctctctcctc ccagattcat taacttccaa catcaacgtt tccctttctt tctgtgtgaa
      601 aatgctccgt ctccttgagc ttatttaatt tggagcagga aatctttgtc agaaataatt
      661 ttttgatcag gtgct
//
LOCUS       KCPA01001171             726 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 128612tic ultra-conserved element locus
            uce-1360, sequence.
ACCESSION   KCPA01001171
VERSION     KCPA01001171.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 726)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 726)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..726
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="128612tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>726
                     /note="ultra-conserved element locus uce-1360"
BASE COUNT          223 a          137 c          127 g          239 t
ORIGIN      
        1 tttttattat ttggaatggg tgctcactac tgtactagag atcagggatt cttattctta
       61 ctaatgaaga aaattataac agacttggtt gaagtactat tatttccctt tctctcttct
      121 tgctatcttc agtgttattt acattgatgt gaattgcaag taaaccaata ttatccatct
      181 ctctgcctta atttgttgac tttaataagt cttaaataag cgcttcctga agatgaagta
      241 agatatgcaa gcaagtagtc cttttatcaa caattttgcc acagaaacac acaaacattt
      301 caatggctct tcattagcaa acaaatcaac aagtgatatt ttaatgcatg actttattcc
      361 atctctgtgg ggaccgtagt tgagagtgtg atgtacagta cagagaaagg aatcatcagc
      421 cacaatgtcc cagggctcta tccattgagg acttctcagc ctctgcttaa agagtgcatt
      481 taattgactg atagacagta gcttctttgt tcacagaaga cagcgaagta atggcagctt
      541 gaaaatcgta ccatctacag gatctcctga gactagtaac agggggatat gtgtcaggaa
      601 taaataaata atctaattat taagccactt cctgtcaagt taactccaat ttgttggctt
      661 ttgaaggcaa caaaacgagg catttttcct cattatgctt ctctttttat accactggta
      721 atcaca
//
LOCUS       KCPA01001172             852 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 128722tic ultra-conserved element locus
            uce-1822, sequence.
ACCESSION   KCPA01001172
VERSION     KCPA01001172.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 852)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 852)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..852
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="128722tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>852
                     /note="ultra-conserved element locus uce-1822"
BASE COUNT          235 a          162 c          158 g          297 t
ORIGIN      
        1 attcggcatg tggtatgctg tgcttttcca gcaggctgct ttttgtcatt atctctccac
       61 ccaagtgagt gttcaggatg ggcatgttct ttcttcaatt attgcagaga actaaaatgt
      121 aagcaataaa tgctaaagcc agatttttct aatacaaaac atcaagcctt tgtgttctca
      181 tataattatc ccgaaagagt tacaagcctg gaaatacaat actgtgtctt aaaatatgaa
      241 gcagtgtttt ttttcaggat gaggataaga atgtgattta agtttgcttc agcccatttc
      301 ttcactgtgt tgtgctgaca tgattgttca aagaaattgt gcttttggaa ggaaaaggtt
      361 aaagtttgct actgatattc atcaggagat ggatatttaa tctttaatct cttgttctag
      421 gcccctactt cggatcaact cattatcccg aataaacgat gtgtcattcc cattatttat
      481 gtttcactgc agccaaagta tctggacctc gttttggtaa gcaccattca tttcgaccca
      541 ttcagtatta atctcccttc taacatcttt cctgtcctat gtgctgtccc ctatttgctt
      601 ttatgttttc cgcagagtgt ttataaaagg ataatctttt acaaagcaga cagaattttt
      661 gtgtataaac tgctctgttt gaatgcctca ttgatatacc atctaaactg aagtgttcag
      721 caagattagt gcatccactg agccactgaa ctgggtaaaa atatgggaac tgctcctttc
      781 tttatagcga gagagggtag ctaatgatgc catcttcttt taaataggat actttcagca
      841 gatggactct ga
//
LOCUS       KCPA01001173             784 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 128835tic ultra-conserved element locus
            uce-4607, sequence.
ACCESSION   KCPA01001173
VERSION     KCPA01001173.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 784)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 784)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..784
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="128835tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>784
                     /note="ultra-conserved element locus uce-4607"
BASE COUNT          277 a          153 c          168 g          186 t
ORIGIN      
        1 agcaatggtt ctctcgtatc acgaaggact tacattgcca cgccaaagaa ttcgtgtttg
       61 gcagtggaga tgacaacatc agccatgcac agagctcgga aatagtcatc cttgctgggc
      121 aagtaccccc agtgcaagac agacgatccc aacacttccc tggcctctga aaagacatct
      181 ttaacaggag aaagaggaaa gtcatctatt taatatggtg taaaatgata taagatgtca
      241 gcagtgtctc atctgaagtt caggttaatt agctgctgct tattttaacg aacttcttgg
      301 agttgtttgc ttttataatc aaggcacaga agcagaacca aatgttaagg tgccaaaaaa
      361 agctgacaaa agcaaaggcc cgcctcgcca ccctccccct aaatgaaaag ccaactgtct
      421 gcttcataaa actcgcttag cagacactga aacaaaatgg actgtaaagt tcgttagatg
      481 aaaatattaa aaaagaatta agctaatgga gataaaatta aaagaaatga ggcaacaaac
      541 acatcacacc aaaaatggca ttgcagtgac agctaagatt cctaatgacg gactgcattc
      601 ggaaaaatta aatggcattc cgtgcttaaa tttctttgga aagtaatgat ccatgaatga
      661 tgctcactcc aggcacttca gaaggagtga aaaaagcaaa gtgttctgaa ataacaaaga
      721 aatatgtgtt gcagagtgga aggaggttta gacaatgcca tgggaggtct cctaaatggg
      781 gctg
//
LOCUS       KCPA01001174             862 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 128948tic ultra-conserved element locus
            uce-990, sequence.
ACCESSION   KCPA01001174
VERSION     KCPA01001174.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 862)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 862)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..862
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="128948tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>862
                     /note="ultra-conserved element locus uce-990"
BASE COUNT          272 a          175 c          170 g          245 t
ORIGIN      
        1 tatttcagtc tttgggcaaa acaagcttga catccctgtt ggcatctcag ctgagaacag
       61 acactggcct tactcagaaa acattaaacg tgactttctg ctagctgtgg cagagctgaa
      121 ttctgaaggc agggggagga gaggtcagag gaagcagtag ttaacggggt aaagtgagtg
      181 ttataatccc caaattgcag ttggactgaa tgtttgcaga caatctgcct gtctaaacca
      241 agacagtctc atttttcttt cttctaggag agggttaagt ataatctgaa gcctggaaaa
      301 tggctgctgt tgatactagt gaggccttct ctttaactag atccttcagg aaaaaacaaa
      361 ttaatcaaca gccagctgaa gtgggtttaa tgattgcatt ctgcatacaa tcagcttttc
      421 ccttttcaag ggccatcaat atgtcaaggg aagacatatc tgaaggatat agctcttaac
      481 atcaaggtta tctattctcc acaaggctcc cactccttac tgggctgata ctttacactg
      541 cctgtgtcta acattttcat caactctgca atcaatcaag gtaataatgt tgtgcaaaaa
      601 atcaattaac aatgcaatta aactttcctt attatctcaa agggctgaaa taatacctaa
      661 agggaagata gactcactga atgcagacat ccataaccca atgtgaaagt gaattatgag
      721 gttagacaga tgcaggcatg tactggcgct gttattttca aagggatata tctcatccag
      781 gcagtgtatc agtcaccacc aatcccatac cctaaaattc caaattactt ttaagaaata
      841 tacgatgtgc aatatccatt tc
//
LOCUS       KCPA01001175             514 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 129056tic ultra-conserved element locus
            uce-3225, sequence.
ACCESSION   KCPA01001175
VERSION     KCPA01001175.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 514)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 514)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="129056tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>514
                     /note="ultra-conserved element locus uce-3225"
BASE COUNT          185 a           67 c           88 g          174 t
ORIGIN      
        1 ccattagtta ttttagaggt aaaaaataaa aggatgtttt acctgccaaa ttttgctagc
       61 tacccatagc ttaacttaat gatttgtata agtgatagta attgctgaaa ctacagttga
      121 gtattattag ctataaaatg aacatggtta tatgtccaac acaactagca aggaacagaa
      181 atgcagttgt atccaagaga aaataattac agcaataatc agtgtaattc atgataatgg
      241 ctgaattgaa tttcacacca tagctccaag cacttacatt taatgaatgt agtttgtgct
      301 tgtttactaa aaaggttttt agcagaaaat cgataatgta acttcagtgt ttctaattgc
      361 aaatgcaaaa aaagtagtgg ttcaataagg attttgtagg gaaaattaag gtatgtgagc
      421 acagcaaatg ctgttacttt aattagacta cctgtacatt agtgctatag ttccttaata
      481 tttatttatt agtccatatt gattaaaatt ggtt
//
LOCUS       KCPA01001176             579 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 129163tic ultra-conserved element locus
            uce-2645, sequence.
ACCESSION   KCPA01001176
VERSION     KCPA01001176.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 579)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 579)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="129163tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>579
                     /note="ultra-conserved element locus uce-2645"
BASE COUNT          147 a          125 c          145 g          162 t
ORIGIN      
        1 aaaaggtgca aattgcagct gcacaattaa atcatggggt gtgtcccggc ctcgcagctc
       61 agccctaagg aggagacagt ggcattacta atcagggctt tgacctttac atggctttta
      121 tttaatacac attccacact tccccaaact cccatccaaa acattgacat ttccgctgat
      181 agattgggtc agattttgga gtagttgggg gactcaatcc actcttacaa tggttaaatt
      241 cttacagcta aatgggctta ttcagttagt gcagcagctg gtgtgatttc gagaagaaaa
      301 taaacatttc cttcaaatat tttgattggc aactggacaa ctgaagtact caagctcgga
      361 ttgccagggt ccaaaaaagc aaatgggggc tggacggcga gtaagcgagg aggcagcact
      421 acggagcaga tgtgtgtgag atgtaccgag gagacggggt ttttgcccat tttcagctgt
      481 gattccttca cccactcctt gttccctggc tttgccagct gcttgctcca ggttgctgtt
      541 tgatctgtga cagagcttgc tgctgagtta ggtggttat
//
LOCUS       KCPA01001177             486 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 129270tic ultra-conserved element locus
            uce-7940, sequence.
ACCESSION   KCPA01001177
VERSION     KCPA01001177.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 486)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 486)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="129270tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>486
                     /note="ultra-conserved element locus uce-7940"
BASE COUNT          149 a           91 c           91 g          155 t
ORIGIN      
        1 tttttattag actagtcagc cttgatatta gtcttcccaa agctactatc cattacactg
       61 tcaggaacgc aagctgcctt acagtaggcc aagtgtcaac agaaggtgag gcagaaaatc
      121 agccacaatc taaagctaat taccctgact agaagttaat taaatacttg ttaggagcag
      181 cagggtagat cctaattaaa cttgtctaat aacagtatgc tgacatactc tgacactggg
      241 aattcctaca gggtttaaat aattgtacaa agggcaataa tacctgtcac atcatggtgt
      301 gcaggcaaac cctgaagatg cacatttctc agtattttct gtattaattt gccacatatt
      361 gtgcacttca catgtgttta atttacacat gttttaattt tggtgccctg gatcttttaa
      421 atgactttgc tgttgctgat cgaaaaggga gagggtcatt agtatttcat tgtatcattt
      481 aataca
//
LOCUS       KCPA01001178             863 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 129381tic ultra-conserved element locus
            uce-1819, sequence.
ACCESSION   KCPA01001178
VERSION     KCPA01001178.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 863)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 863)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..863
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="129381tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>863
                     /note="ultra-conserved element locus uce-1819"
BASE COUNT          278 a          136 c          172 g          277 t
ORIGIN      
        1 tcttcagctt tgataaatac ttaaaaatgt atttttaaaa agtcattaat ttctggaata
       61 taagactcag caatcacact tgcagcatgt gaagctgctc tgaaatttgt agcaaaatat
      121 ataccacatt tttaatcagg gaactgtgtc tcataaagcc ctaatacctg taagtgaatt
      181 aaagcatttt actcattcaa atattccatt cattatatga tctaagagga aatctatgga
      241 atcctattat aaacttagaa aaaggataac tctgagtttc agccataaac tgaagtaatg
      301 cagatgaact ggacacatat gttgcacaat aggtgattca gagcaatata gcacatgctg
      361 ttttatgata tggaaagcaa tcaaatctta tttgcaaaaa attcagatca attgaatttt
      421 aatgagaagc aggtgctgga gtgtagcatc cacaaagaat tctgggaatg tttaaaatta
      481 gtcccatatt tgccaggaga cagttgggta cataaacttt tttatttctt gattcatggg
      541 tctgttcgga ctgtagattg ctctgccatt ctgagttcag caatttgaat aaattatgct
      601 gaaaatcact tggtggttca ttttgtgtga aattatattt tcgctggaaa ggttaatttt
      661 gaagggagct tgaatggctg gaaattgtgc agctggggag tctgcatgtt cagaaggcag
      721 cagttattaa aagcgattgc atttcctccc agatttctcc tgagaccaga atcagtggag
      781 atgttaaacc ttgcttgaca ccccagttgg ataattgtgg gtgtgggagc taatcagcag
      841 aagatgtctc ctcaatttaa atc
//
LOCUS       KCPA01001179             363 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 129486tic ultra-conserved element locus
            uce-4752, sequence.
ACCESSION   KCPA01001179
VERSION     KCPA01001179.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 363)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 363)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="129486tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>363
                     /note="ultra-conserved element locus uce-4752"
BASE COUNT          128 a           68 c           61 g          106 t
ORIGIN      
        1 aagacagtaa atctctgtgt atgaacccac ttcaagataa aatccaaact tggagcacag
       61 atgcatatgc atcctggaag ctacataacc cagtcatatt ttattcacat cacactccaa
      121 ggagctcact gactggaatt caatagaaac tgttctctgt gtgaaagtaa tttcagaaag
      181 taatctagtt tatggaaatg aaaggcatca aaacacaaaa aacactgttt ctgtacaagt
      241 gctttgcttc aaatatttga catggaaatt tatataatcc ctctggggca catgggtttc
      301 acgagtgtta acatcttttg aaatgaattt cacaaatgtt tatttggaat accaggcata
      361 caa
//
LOCUS       KCPA01001180             763 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 129600tic ultra-conserved element locus
            uce-4658, sequence.
ACCESSION   KCPA01001180
VERSION     KCPA01001180.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 763)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 763)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..763
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="129600tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>763
                     /note="ultra-conserved element locus uce-4658"
BASE COUNT          200 a          157 c          179 g          227 t
ORIGIN      
        1 tgcgaggtgg gacaccaatt ggaggcacaa tgctagcagg tggctggaca gaaactggtg
       61 gaatatttgg attctcactg atgggaatag gtttgggaac tggcgtgggg attttagtga
      121 cagagcagtt ggcagtgtca gacggagagg cagtggtaga cgctgatggt ccagggcctt
      181 gaatttggcc agctgcagac gctggggatg gggcttttct ccgagcatct gctagcggta
      241 tattccaaga atctggagtc agcagctgca ccccagtgcc ttctgcttta ttttcgactg
      301 gaggatgtaa tgtactgcac agtccagctg gaagattggc ctgtgtctct ttgtagaaaa
      361 tgtccatttt gtactgattg agacattttg cactgcagaa ctgaagcctt ctttccccgt
      421 ccccaaaatc cagatactct tttgtgtgtc ttatgtgctt acaccagtca catacctaca
      481 acacagtaat aaaatcaaat caggtaagaa aaacaatctt ctcttcatag tgttatttta
      541 aaagtaattt ttcagttgct ttttctaaca ggaagttaca tttgtgaaaa ctgcatcata
      601 ttaatgaacc cttttctggc tcctcagttc tgccttatat gatgcattat atatcttaaa
      661 cccacagcac agagaagaat cctcagctgg cataaactgt tataactaag tatgcaaagt
      721 ccatatgagt atggctgtga ttactccttg cctgtgccat ctg
//
LOCUS       KCPA01001181             500 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 129709tic ultra-conserved element locus
            uce-642, sequence.
ACCESSION   KCPA01001181
VERSION     KCPA01001181.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 500)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 500)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..500
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="129709tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>500
                     /note="ultra-conserved element locus uce-642"
BASE COUNT          157 a           82 c           83 g          178 t
ORIGIN      
        1 ctttcagtca aaatggggtg ggagagctgt caatgtttta aaacagctgt aaaaaaaaag
       61 ttttacaagt ttaatcttaa taatctaaac ccagcagaca cactctgtca taaaataact
      121 attagtgact agtttgtatc ctataaatct aacttgagtt gataatatgg tccattacca
      181 gctaactgca cagagtattt ttcattttac actcttcagt tactttttag tgaagtgtta
      241 aaaaatatga agcttttctc ctctctaaaa ttgcacactg tctgtctgtt attagggaga
      301 taacagctct tataaatgtt tcagtaagcg ttaagtagac agttatgtgc actctcattc
      361 cacgcttatt tgcttactgt aataaactga taaaatatgt gtggtttgtc tctgtgtatc
      421 tgcaggcatc atgagacaca tagatttcct ttagaaataa tgttgtgtct gcagaattga
      481 ttggttattt tcataaacca
//
LOCUS       KCPA01001182             754 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 129822tic ultra-conserved element locus
            uce-4428, sequence.
ACCESSION   KCPA01001182
VERSION     KCPA01001182.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 754)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 754)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..754
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="129822tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>754
                     /note="ultra-conserved element locus uce-4428"
BASE COUNT          138 a          178 c          231 g          207 t
ORIGIN      
        1 agaaaattat ttggttaatt acttttacct tgtactgaga ctcgcagttt tcgttccagt
       61 gggcgactcc aatccctccc caggctttga ggatttctct ctgttcattt gttggagtat
      121 tgagttcaac tcactaatga cattagcctt ggggcctgag agaatcgggc ttttcacctc
      181 cggcacgtcc ccccatagct tggatgtcct ttgggggaca actttcgcca ggttgggctg
      241 ggcactgatg ggaggcgggg gtggagcggg aggggggatc acaaagctgt ctacagtttc
      301 ctcgatcagc gcgtccttgt aaagtgcatt gcttttgttg attatgggct tcatttttgg
      361 cttaggaggt actgggggtt tgtccaccag aaatgtttgc ccatctgcat agactgtaca
      421 agtatccacg ttctccgccc cttccgagga taaggtagag atgctggaca ccgttgagat
      481 agtgctggtt gtctctaggt gatggtcact gctgctccga ctgtcgacct cctcgatccc
      541 agagtcggtg acgttgtcga agctgtcggg gggtggcagg aaggaggcag gcaagcagtt
      601 tgagagacct gcttgctttt tgccgtccaa ggagtttgct ggctggctgg ggaaggggtg
      661 ccgttcttcc tctgcgccat caggtctgtc agcgccgagc cgggcaccgc gcggtcgtcg
      721 gggatgtcaa agctgttggc aaactccaag ggag
//
LOCUS       KCPA01001183             355 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 129924tic ultra-conserved element locus
            uce-5702, sequence.
ACCESSION   KCPA01001183
VERSION     KCPA01001183.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 355)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 355)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="129924tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>355
                     /note="ultra-conserved element locus uce-5702"
BASE COUNT          132 a           56 c           52 g          115 t
ORIGIN      
        1 taagatcccc taaaatcaat gaaaaagcag aggttgaaga aagcatgaga aagggaacca
       61 cctcatttac agctggggat gcctttacag atttttattg atggcattta tcccatggtt
      121 taacatgtta attatactgt aataaacatg gctttaatat taaacttttc cttattatcc
      181 aaagtcacca cagtccattt cagtaaatat aaaaatatat acttaatact ttgtacaata
      241 ctggtttttg gtccaaacaa aaatggatca gaaaagccaa taaacttact ttaagaattc
      301 ccaattttaa agattttcta aatggattta ggcaactttg aataatggga tttac
//
LOCUS       KCPA01001184             566 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 130032tic ultra-conserved element locus
            uce-2447, sequence.
ACCESSION   KCPA01001184
VERSION     KCPA01001184.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 566)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 566)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..566
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="130032tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>566
                     /note="ultra-conserved element locus uce-2447"
BASE COUNT          197 a          107 c           90 g          172 t
ORIGIN      
        1 gaaaaactga ttaaaaagca acaggttcac ctaaagcaaa tgcaaatacc caaccacagg
       61 tctaaacgtt atacaagtga aaacatttat tctccaccta tcacttgcta atctattgca
      121 aactgcacta tctgggtttg gaacatctgt ataacaaatg ataatgtaga atagttgttc
      181 tgggccttta tgaggcttgg tgttgataat ctccaaagca cacccatgat tctttaaatt
      241 aaacataaga atcttgtctc acagtacagc taggttatcc atgtgtaaga gcccaagcca
      301 agtaattaca catccgctca aaggattaga cacataagat ttctttaaat ttttaataaa
      361 agtgcacagc tgttgtactc ttttgttcta gataaaaacc attaagctca aagtgattca
      421 cagttatgct tcaagaaaac tactttcaaa gtatttctgt taggcacttt ttttagtaga
      481 tttaacatca ctttaacctc acagcaacag atttgagcca ggaataagct catggagagg
      541 tatttggtca agttttaaag aacatc
//
LOCUS       KCPA01001185             592 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 130140tic ultra-conserved element locus
            uce-5888, sequence.
ACCESSION   KCPA01001185
VERSION     KCPA01001185.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 592)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 592)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..592
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="130140tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>592
                     /note="ultra-conserved element locus uce-5888"
BASE COUNT          212 a          104 c          131 g          145 t
ORIGIN      
        1 gggcaccgca gagacaaatg ccaagcttga ggaaacagcc aaagggaagc cggagcgtag
       61 tggtcagagg tgaagccgac acccatcaga gccaatggca gccagctctg agctcagtga
      121 ggaggagcag atagtccgca gaatgcttca cataaaacgc tcactactaa ggaagtgaga
      181 ggcgagagaa atttttttga aaggagagga aaagctagac gtttattctg atcatcaaag
      241 ggaaggaaga agcaaatgaa tcagaaatca aagattgaat atcattggtc ttgctgacaa
      301 agcaatcagc aatcccctca cagcaagtat aggggtttgt tgaacaaagc aaaggaattt
      361 gaaagtcttg aacaaaatat ctttccattt ataaaattag acataatttt agaacagcat
      421 tttgatttag gagctgtgaa gaatttctgc attaaaaaaa tccaaatttt gtgctgtgca
      481 attaataatg actttgtcca aaccctcagc ctcctttgta attctcttaa gaaagcatta
      541 aatgagggta ttttcacttt agttgaaaat caatgacact tcaatgaagc at
//
LOCUS       KCPA01001186             553 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 130251tic ultra-conserved element locus
            uce-7129, sequence.
ACCESSION   KCPA01001186
VERSION     KCPA01001186.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 553)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 553)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..553
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="130251tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>553
                     /note="ultra-conserved element locus uce-7129"
BASE COUNT          161 a           95 c          107 g          190 t
ORIGIN      
        1 aaggtgactt taagaagaaa gataaaagaa acagtgaggt tttttctgaa aagcccagtt
       61 cagctttacc ccttgcagag caataattta ttcaaactac agtttaaatg tctcctcaaa
      121 gagtaaaatt attaagacga tcatgaaaga aaatgcctgt ttatacagaa attatagaga
      181 agtctcttgt ctttatcaaa tctcaagtgt atttgcactt aaaagcttct ttgccaacta
      241 gaaacaatag tgcaggtgca ttgcccttca gtgaacaatg tatttatcct gggaggcagg
      301 aagttggttt cacacctgtt tcttcttttt atttgttctt ggcctggcta atttgctgaa
      361 tgtcatgatt ggtacagctg aggctgtcag aaagaattac cactttgtaa catgacggcc
      421 taattctggc agttcagatt ttacaatgat ttgccttttg ttcttttttt ctgttttctg
      481 tactgcgcac aaactgaatc tgattggtag taacagagaa taggctgctt tattagatga
      541 ctgtcccttt tgg
//
LOCUS       KCPA01001187             537 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 130361tic ultra-conserved element locus
            uce-7308, sequence.
ACCESSION   KCPA01001187
VERSION     KCPA01001187.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 537)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 537)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="130361tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>537
                     /note="ultra-conserved element locus uce-7308"
BASE COUNT          153 a          118 c          132 g          134 t
ORIGIN      
        1 tgggtgtggg cagcctggca gaactgaaat ctgggcttgg gtttggatgg gggtgtggat
       61 tattaaccct tcacctaaca gcaccaaatt taggattgtc cccctctggc agaaatcaca
      121 gaagttgctg tgatggaggg aaaaaatgaa caaataaaca gaaatcacca aatgtcttgc
      181 ctgcttttct cccacactca tttcctctct gtgtcaacac caaacaagac agactaaaat
      241 taatggggaa agcagcaatt agcaaattag gttagcggcg tgttgcagtg tgccatggct
      301 gccaggtgtg aggggctctg gcagtatatt tattaatggc tgtcagaaaa gtgacacttt
      361 gatgaatgaa gctgggtaat cggcaccctc cgacagcgag cactgagagg cctcaacatg
      421 ctaaactgca aaatcaaacc tttctgaact gcgagaggag cgtgctcttc catcagggat
      481 tcaaatgcac cttctcctct aaatgctccc gtaacaagtc taagttgtca ggttgat
//
LOCUS       KCPA01001188             666 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 130472tic ultra-conserved element locus
            uce-2638, sequence.
ACCESSION   KCPA01001188
VERSION     KCPA01001188.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 666)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 666)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="130472tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>666
                     /note="ultra-conserved element locus uce-2638"
BASE COUNT          208 a          123 c          121 g          214 t
ORIGIN      
        1 tcaataacat cttttttgta gactcgttac ctctttattt acccttcaag atatttgctt
       61 ctggtttata gcacaatatg tattgaagag agacataaac tgggcaggga aatgccattg
      121 aaatgagaaa atagaaagtt aatggtgaaa ctagagtagg ctaaattaat ttactgatta
      181 tatgaccata tcccatcagt aagacatgaa ttattttgtt tacagtcttc aggttgttgc
      241 ctggctctgc tacccttcac tgttttcaat ttaaactgca gtgattgtaa agagaagaga
      301 aaataaacca aatgttccca ttccacttat aaattttatg tttataatct tgtagccatc
      361 catggcaacc atgcctgtta ttcaagtgcc tcacctcccc aagctgagca taattattac
      421 tgatacatct ggatgtttaa ctacctacta cagactcttg aattccttcc agttataaaa
      481 tatccattaa tacaggagtg gagaagagtg gagtcacaga gggaagagga gaggggaggg
      541 tttatgtcta ttacttcaat tctcagagga tttatgcctt gcttatcacc acagggagta
      601 aaacactatt acctaagcct gtgccattca gataaaagga tgtaacgtgc ctctttacac
      661 tttgtt
//
LOCUS       KCPA01001189             435 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 130572tic ultra-conserved element locus
            uce-1506, sequence.
ACCESSION   KCPA01001189
VERSION     KCPA01001189.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 435)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 435)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="130572tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>435
                     /note="ultra-conserved element locus uce-1506"
BASE COUNT          158 a           95 c           70 g          112 t
ORIGIN      
        1 tatttctgag ctgttttaca tgtaaaacac aagttctgta aggtcttctc cacttacaga
       61 tacaagtata aaagttccaa acatcaatag atgagtgcaa tgatattcag tctaagttaa
      121 tccccagaca tccaaatcca tgaataaaaa ttcatcagtt ttaaatacac tgagcctatt
      181 aagcaagaac aaaagcatat gcacaaaaga gcttttaata tatttcaaag cccacaagag
      241 ccatggtctc attaaaatta taaattacac aaacatggaa taaagattca aactgcagtg
      301 cagctaagca gattacagca aaccccgcgt tccatatgat aacacaccat ggccctccca
      361 gatgggggct tggaacaaaa aggccatcac tgcagctagg gaaaacctcc ttgtgatctc
      421 tggtttctgt tcagc
//
LOCUS       KCPA01001190             526 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 130679tic ultra-conserved element locus
            uce-3366, sequence.
ACCESSION   KCPA01001190
VERSION     KCPA01001190.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 526)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 526)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..526
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="130679tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>526
                     /note="ultra-conserved element locus uce-3366"
BASE COUNT          156 a          111 c           94 g          165 t
ORIGIN      
        1 gctaatttca cagggtgccc caaacactta tttcataggg aaacaactgc aagtttttag
       61 aaatacttat cctggatgag ataaaccaag gtaacacaac cccagtccca ctacttgcct
      121 ccccccagta taagcctgtt acacctgaaa gatttgttcg gaatgtccag tgggaacctg
      181 gaaatcgtaa taatttgtag tatcgattgt gtgaagctat gcagctgggg cctctagtga
      241 atagacagga atagacattt tattgattaa cttttacagt catattttca ggactctgct
      301 gcaacataat tttcacttcc cagctttgta ctgctgcatc atgaaacttg gattcttctc
      361 tcttaacatt tacccacctg agagaaacag tacggacttg tcttttttaa gctgtgctct
      421 gcagaaatgc ataatatttg gtgtagtgaa ttcttttaaa tttcccctct gctgtcacaa
      481 taaaatgaaa aatcttcaca agtgttctta gcaagtattg aacaag
//
LOCUS       KCPA01001191             755 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 130790tic ultra-conserved element locus
            uce-2013, sequence.
ACCESSION   KCPA01001191
VERSION     KCPA01001191.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 755)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 755)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..755
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="130790tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>755
                     /note="ultra-conserved element locus uce-2013"
BASE COUNT          199 a          197 c          143 g          216 t
ORIGIN      
        1 gcctctaggt ctaatggaaa acagggggct acgcttatcc atgtgacccc taaagaatat
       61 gacatctcac tgcaatatat actttaccat ctgctccctc ctcctcatga catctttcac
      121 tgcaaccaag ttcctgacta aagaaataaa gtgactccat ccattcccag cagttaaggt
      181 taaagagatg cactcggttc taaatctcag ctgctaacgc tctcttgacc tttgactcgc
      241 cttagcatgg cgaagtttga tgggcccatg ccaagccgtc ttctgtaacc catgagttgg
      301 ttaatatact cccatttctc attcagacag ccaacagagg caaaaaaggc agcagggcaa
      361 caaatgctgt ctcctgcaaa tgctctgtaa taaattgctc tttcagtagt gcagaagaca
      421 gatttttctt ttgctccttt cctcctttta cacagaagtc accaatggaa agctcgcttt
      481 cccacctggc cccagctgac tgtgcccata aatttgccta tgcaatgcct gtttacgggt
      541 cgctgctgga acacggagac gggtgcattt tctaagcact gggtagataa tcacagtaat
      601 tgatgtttgg agctactcac tcctaggagc atagggtctc tttctcccag tgaggccctg
      661 ctccatgtta tcagtccagc ccataattaa atatcactct tttacaatat gtttcaggtt
      721 ccttaatgag tctaaagcag aaatagtcac ctctt
//
LOCUS       KCPA01001192             358 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 130892tic ultra-conserved element locus
            uce-4257, sequence.
ACCESSION   KCPA01001192
VERSION     KCPA01001192.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 358)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 358)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="130892tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>358
                     /note="ultra-conserved element locus uce-4257"
BASE COUNT          118 a           73 c           72 g           95 t
ORIGIN      
        1 gagctgagcg gagcctgcat gagatggatg cgggagccat cgatcccaag ggataagagg
       61 gtttctaccg tggtgtaaat gtcaattgta ttcccataga caatgacgtt ccctggggga
      121 aagatttcta agacatacca tgaaaacctt attagtataa ctcagacgat aataacatgg
      181 aattgctctc tttgaccttc ttatttctct gatgctatga agcaaacaat gttacctagc
      241 aactgcagct aagataattt agtgaagaat ctgtacaaaa catcccacaa agtaggctta
      301 acacagaatt catcctgatg ccataatctg aaatttgcaa agcctctact aaaaactg
//
LOCUS       KCPA01001193             306 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 130996tic ultra-conserved element locus
            uce-7567, sequence.
ACCESSION   KCPA01001193
VERSION     KCPA01001193.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 306)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 306)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="130996tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>306
                     /note="ultra-conserved element locus uce-7567"
BASE COUNT          105 a           67 c           60 g           74 t
ORIGIN      
        1 gcatagtaaa ttttaaagga aaaaaatgtg tcaggcaggc atgagctgtt ccctccctcc
       61 ccccctcttt cattagctca ctggcagggt ggcacttctg aacctcatta ctgcaggagg
      121 atttatgaag ctgaacccaa tggcaaagaa aaggcatctg tcaataattg tagggagctg
      181 cactcacagc tttgaaatct cattaagtat gcagttatca ggcataaaga tcaaaaacat
      241 tactcaactc cgacagaatc ttatggagga acattaatta gcaacaggcc tacagtacaa
      301 aaaaaa
//
LOCUS       KCPA01001194             707 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 131107tic ultra-conserved element locus
            uce-3135, sequence.
ACCESSION   KCPA01001194
VERSION     KCPA01001194.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 707)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 707)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..707
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="131107tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>707
                     /note="ultra-conserved element locus uce-3135"
BASE COUNT          178 a          153 c          148 g          228 t
ORIGIN      
        1 ataccattat tcacctctta tcattttagc aaagtagtta cactgctgtc agaggtaatg
       61 gagagcatgc cgctaagaaa attggctgta atttatttat caattgtttc tgcataccac
      121 aaaaagagac catctacttt acggctgggt ctaaggtatc tgagagccct tgaagttcat
      181 ggttttccgg tattctaagt tctacttatg gcttttcctg tatatgacac acaacaccac
      241 ccctgtggtc ttcaaggctg atttcttctt tgctttcttt agtcacagat catcctgagg
      301 cgtcccttaa gtgcatttgt attgttaagt gcaccggcct gatttggtgt taattcaatt
      361 tgagtgccct taatatcttg cgggagtgag gcaatgcatg agagctgtac cttgtaaaaa
      421 caggttccag gtctgcctga gagcaaagca cctttcccac agcaatttac caaagttgct
      481 gataaaattt tcataaggaa acctttttag tctgacccta ttgtgttgtt ctaccattaa
      541 gagttgggga actgagacta tattctggtg acagtttatc actatctcca ttattttagc
      601 gtatagacag cctactgatg ggtcacagcc tgcatcctgt cctcttacag tgtggaaatg
      661 gctttcagag ctggagccca gaggcccagg tatgccagct gctgcat
//
LOCUS       KCPA01001195             519 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 131217tic ultra-conserved element locus
            uce-560, sequence.
ACCESSION   KCPA01001195
VERSION     KCPA01001195.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 519)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 519)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="131217tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>519
                     /note="ultra-conserved element locus uce-560"
BASE COUNT          166 a          107 c           84 g          162 t
ORIGIN      
        1 tcacactctt caaggcccag ttggctgtac aaacacgtgc tcttgcatct ctttgaacta
       61 tcctcaaaac accagtgtta taattggata cccttacctc tgctggcctg tgctgcatgg
      121 gtcatatatg taaacatcaa gctcaaataa caacccccaa atttaattta tttctaccta
      181 aacaagttct tttatcataa agcaataaat ttgtcttggt gctagcaatt tgttgcgggt
      241 gacataacac tgcaaattga ttaatcgcta ctgtacacga caaaatgaga aaagcaagga
      301 attattatga atagcgtcca tctgatacag tagggattca ttactcaaaa gtgttagcta
      361 gtggttagct atccccctgt tgcagattac attcatttgc agaatcctac accatgctta
      421 cacaaatcaa caaacatgca tttattaaga catggaatga aagctattaa aatgtgaaaa
      481 attgcctttt tctttttagt caagttttgg tggtaacca
//
LOCUS       KCPA01001196             472 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 131323tic ultra-conserved element locus
            uce-235, sequence.
ACCESSION   KCPA01001196
VERSION     KCPA01001196.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 472)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 472)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="131323tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>472
                     /note="ultra-conserved element locus uce-235"
BASE COUNT          175 a          104 c           73 g          120 t
ORIGIN      
        1 aaactctaat aaaacaaaat tctatgaact gaaatggtat caactggtaa tagaaaatga
       61 aaacgagcta ataaatgtaa gaaataaaaa ctacactttt aacaagatgg taagtcacta
      121 caataacatg tgaagtcacc tatactttct taacacgatt gaaattacat tggtatgggt
      181 tttaacccgt aatgtaataa tctaaggctt taatagatgt acagtacaat caggaaaatc
      241 aacacatcat tcttatctat aaagcatctc tctcaagcat aaaaactcgc agtaaactcg
      301 gagtatggcg agttctacaa ccgaacccgc gcctctccct ccacccgggg cctggcccca
      361 ggcagcccct ggctgatcag agcaaaaata tcctttactg gctgcaacat ccaaaccaca
      421 aaaaggaatt cctttggatg aatccattct taaaacttga atgcacatct at
//
LOCUS       KCPA01001197             701 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 131432tic ultra-conserved element locus
            uce-1371, sequence.
ACCESSION   KCPA01001197
VERSION     KCPA01001197.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 701)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 701)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..701
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="131432tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>701
                     /note="ultra-conserved element locus uce-1371"
BASE COUNT          222 a          130 c          137 g          212 t
ORIGIN      
        1 caggaaggaa ctgggctgtc agcttcgtcc tgtcaaaaag ccttccagtg ccatgagctg
       61 aaggcaggtt ccaattgtta agtcattctg gcccgagctg aatttaaagg caggctcctg
      121 tagctaacgg aagttgctgg aggcaacttc tcagcaaagg cattaaaatc atatgtccca
      181 taattattct tttgactcaa ttacccattt actctttatt tttatatcca gtggaacctg
      241 agggcaacaa atggggaaca aatcctgtat aatagttctt gttttggtac attcacttag
      301 tggtgattta ttaagggctg ctgaataagc ctgattaaaa tgcataaaca gttctgaaca
      361 gtaaacaacc atgtctaagg atgaaaaaat gggacccaca tgctgtgcat ggaaattgcc
      421 cttaacaaca tggcctattg ttgaacagat aggaagccaa aggttgcttg taatcaaatt
      481 tgaagtttcc catcacttat aaaagcaaca cttccttgtg taaacgtttc aatttgttgt
      541 tgttgaaaac tgcttcctga cttaatcctt acaggaacac acaaattctt tgactgtcag
      601 gtagaaagac aattttagat aaaataactt ttagatttag actaagtaaa ataaatacgc
      661 tgagttcctg cagcagtaaa atcttttctg agattagtta g
//
LOCUS       KCPA01001198             884 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 131545tic ultra-conserved element locus
            uce-3541, sequence.
ACCESSION   KCPA01001198
VERSION     KCPA01001198.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 884)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 884)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..884
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="131545tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>884
                     /note="ultra-conserved element locus uce-3541"
BASE COUNT          234 a          253 c          181 g          216 t
ORIGIN      
        1 tgggtccctg acgtcttctt ctgccccatt ttcctcccca cggggctgcc cctgcccagg
       61 ctcgtatgaa tgaacagaag tgcctttcat cccccacttg cctagcgctt caaaaggaac
      121 tacgaaaata gcagcaacaa aaatccagcc gcctgccaaa aggcccgcac acgtcccatt
      181 ctcacaggca tgcgaaaggt tggagagctc agcaaaattt ttatgtacgg gagcaggccc
      241 aaggaaaact cacacgccat aaccaattgt ggacagagga tcatctatca gcagacaaat
      301 gcaggaactc cagaatgtct ctcctcaaat gaaataatat atctttgaaa gccaatgccc
      361 gttttaggcc tgaggcccat atatcaagcc tgagaggctt gtggatacgc tccagggcca
      421 ttaaccttcc acctgtttcc ccttgtcctt caggatgaga ccctgccctt gattttactc
      481 cctttccctg ttcatcttcc gacagagtgt aaatgtaaag cagagggcct gcgaaataat
      541 tcaaaggcaa tggaccaggg acatggttac aaatctctgc cactggcact gtgacttatg
      601 caggcagttt gtcacacatg agccaggtga cctctgtgac ataacagaga aaaatatcac
      661 ccaagatcaa aagatgagat tcagagcact ctaagtaact ctggtgtaca cagccacgct
      721 atgcagtggc caagggttcc tctcctccca gagctgctcg ctccgctcac cagcgggaga
      781 gacacactcc tgctaatttc ggtaatcctt ttctctcatc tctttggaaa tctttcctgt
      841 gacctgaaca tcaacatttg tctccttctg aagcccctct tttt
//
LOCUS       KCPA01001199             648 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 131656tic ultra-conserved element locus
            uce-5593, sequence.
ACCESSION   KCPA01001199
VERSION     KCPA01001199.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 648)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 648)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..648
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="131656tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>648
                     /note="ultra-conserved element locus uce-5593"
BASE COUNT          187 a          157 c          140 g          164 t
ORIGIN      
        1 agaaacacca agggtgggaa ttaaaacgtt ttcatttcct ctttcttgtt tgttacttga
       61 tctttctcta gtaaaaaaac aacccgacaa caaaaagccc agctgcacct ggggttttac
      121 acaaatgttc tcttgcactt caactcgttc accttctggc aacactaaaa tacggtgcac
      181 tctctcttta agagagactg ctccctgccc agctgttgac ttgcctgaag gtgagacctc
      241 tgcttaaatt catggctcca gctgtcaaaa gcaaagaaaa gcagcttttc cttggcggct
      301 ctctgctttg ggtagaattt gacatcttcc tcagtcagca gaatttaatc agcatcaagt
      361 gcccacagcc actcagctcc accactgctg gggctggggc taaccagacc tgcaaaggag
      421 aagaggggga gagtcctcaa cacagcaggc aaagacacag gcacaaccac acatttctat
      481 gggaaatcca aagcttgtca ctgtccaggg agagtctcat tatcctattt gacttaagaa
      541 ttgctgttat catgcagtaa ccttacctgg ctcagctgag cagctgagag cagtaaatgg
      601 agtgagttat tgacagctaa caatgataag taaaggtggt gaaacagg
//
LOCUS       KCPA01001200             566 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 131767tic ultra-conserved element locus
            uce-3476, sequence.
ACCESSION   KCPA01001200
VERSION     KCPA01001200.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 566)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 566)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..566
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="131767tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>566
                     /note="ultra-conserved element locus uce-3476"
BASE COUNT          180 a          110 c          105 g          171 t
ORIGIN      
        1 ttgtaacaag cagaaattac tcagttcctt aaataatgag atatgttttt tatttcttcc
       61 actctttatt tacttgcagt ctccactgtt ttactgcaaa aagtgtttgt aaagcaagaa
      121 ttgtgctgat cacatcaaaa ctcattaata taacttgttt ttccattatt agcaccatct
      181 gagcctgttg aaagccttaa ccagggcttt aatttttcca cagagggctt taaattaatt
      241 agtggtttac atgctaacaa agaatctgat acattcataa atcaatctaa tgcagaagga
      301 ttaccggagg gtggaaacct attcagtggg gacctcacat tcacttaaca tggtgtgttt
      361 tcaacaaaag ggtgcaggtg tggaatagac gggtaccagg aagagcccat gataatcact
      421 ttgcatcact taaagacgca gcaggacaca tcagagccta gggcccaccc taagtgaaac
      481 ccatgtagat ataaaaggca gtagcatccc actttaacct tcacagataa attgccagag
      541 tggtacaatt tcttttatgt aggtta
//
LOCUS       KCPA01001201             695 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 131879tic ultra-conserved element locus
            uce-648, sequence.
ACCESSION   KCPA01001201
VERSION     KCPA01001201.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 695)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 695)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..695
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="131879tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>695
                     /note="ultra-conserved element locus uce-648"
BASE COUNT          219 a          134 c          130 g          212 t
ORIGIN      
        1 cctcgaatgt ggacatttat gtattctcat tattcagacc ctcctgatgc cacaatctcc
       61 cacttctata gtttataaat gtttgattta aaatatagcc attttatcat ttgtaccaca
      121 tttacctcat cttaccacca ttctgactgg atgagaagct aatgtagcct acactgtctg
      181 gtcaattatt gcatggacac cagggaccaa ttaatgccat ccataaaagc ctgaatcatt
      241 ctgtcaatta actagaacta actatgtcat cagatatatt actggtgagc aagtctattt
      301 ggttgcaata tgtcttgaag gagagcagta tcaaatgaat cacaattgac ttggacaact
      361 gctagcataa tttcagaaga tgaaaagaca aatgtggtag ttattagtgg tcccctgagg
      421 aattacggcc aagcaattgt aatgtgctaa gactgtacta gcaggtgccc acagcacaaa
      481 ccaggcagag ggttaaatca atattttcaa tttcttggga tcaattcagt gtttgaacaa
      541 gatggaaact tgttagcaat tggcagaatg tgtaaatgaa aagccaaact tcttattatt
      601 tgttaaaaag gaatcagtgc tctgcatcat gcccttggca cgaggtaatg ctttcatgat
      661 ccagttgctt gggcattcac taaaaatcta gcagt
//
LOCUS       KCPA01001202             716 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 131990tic ultra-conserved element locus
            uce-337, sequence.
ACCESSION   KCPA01001202
VERSION     KCPA01001202.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 716)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 716)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="131990tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>716
                     /note="ultra-conserved element locus uce-337"
BASE COUNT          241 a          131 c          128 g          216 t
ORIGIN      
        1 tttgcagaaa ctgatgcaaa gagattcttt tcttcaggac taatgaaaca tcaagttcat
       61 ttatcctatt tccactaaat ggaaaacaaa aatcactctg cagtggtgac atctcaatcc
      121 tctaactgtg tgatttagtc tagccaggat tttgaattct gaattctgca gtagtacttt
      181 tctcttaata tggacttatt acccacttgc cacttagttt atcagtcagt ggttaaatcc
      241 agttctatca gtgaagtaaa tgcctacaca ttatcactct gcagcaggct gccaacagag
      301 acagtcttgt cctagtcatt aacaagcaca atgtatgcag aacaccagag gggaattaaa
      361 accacaaaaa atacctcagg gtggtatttt taatatgaga atttaatttg taatttcaca
      421 gattaagaat tttggctgca ttaatccttt tatcagctca cagcaggtta tttgcagaag
      481 cataaccata aggcgatatt cgttggcaga aacacgtctt tgcataacgt taaacatcag
      541 gagcagtgaa accttttgaa ggggggagaa taaagatgaa aaatcattat attttaaagc
      601 aaggttcttc taaatgcctc cagtaaaatt tcgagttaca gaaagactat ttctgtgtct
      661 agtagataat cattatgaag cataaatcca gatgcaagaa aggacaatcc cggtat
//
LOCUS       KCPA01001203             921 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 132102tic ultra-conserved element locus
            uce-2042, sequence.
ACCESSION   KCPA01001203
VERSION     KCPA01001203.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 921)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 921)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..921
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="132102tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>921
                     /note="ultra-conserved element locus uce-2042"
BASE COUNT          301 a          136 c          168 g          316 t
ORIGIN      
        1 gggattggaa ttgcttaaat ttgttgataa ctcacgatgt ctgtattaat atctttgttt
       61 ccatctgata gtgatttcta tttgattgtt accgggactt ttggggtgct gcatatgtta
      121 attttatgtt gccattgtta ctactgtctt atacaacaga ttcagaatat taaacaagta
      181 caattgtttt aactactgtg aaattgacag atgaagctga aaaccaaaag cacctttcat
      241 gggattttaa acactatttt cctccatatg ccatcccaat tattatttag atattacatt
      301 cctaatttac tgttaaggtt gattagaatt caagcctctc aaaagcatgc accaaaggtc
      361 ttgggctgtg gaaaacattt ttataaaata atccattaat gcagaggagt gcaactaaat
      421 tagttagcaa tttgctgagc atgaattaat gaacagagct tctcccagct cccagagttg
      481 taattttcat aataacctca gacctttatt tggcaggttg tttagttttt tcgtttgaag
      541 gttttcatta gtctaatgag gactgtgcaa gggcgagcag tcagcacaat ttacatgggg
      601 aagctatcat aataaatgaa gcaatttgaa taacacgcaa gggtttatgc aacaagataa
      661 gaagagattg tagagtgaga tttagaggta accaatacat tagaccaact aataactgaa
      721 gtaatcccaa taaaaggctt aagtgaaagg aatgaaatta atgatatata caaaactgta
      781 atgatatgat acatgattca ttagattaat aaaataagtg ttcaattgtt tttagtgctt
      841 ttagtccaag ctttgtttgt atcaggcact ttaattagga ttgttcactg gatcactttg
      901 cttagttaag ttttagacca t
//
LOCUS       KCPA01001204             403 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 132211tic ultra-conserved element locus
            uce-3742, sequence.
ACCESSION   KCPA01001204
VERSION     KCPA01001204.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 403)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 403)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="132211tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>403
                     /note="ultra-conserved element locus uce-3742"
BASE COUNT           93 a           79 c          124 g          107 t
ORIGIN      
        1 tgagatgtct gaagggggag ggatttaatg ccataaggga gcaaggtgct gtgagaatac
       61 tctgtctcat aggagttcat gtccagtttg ttggcaccgg gctgctgcac aggcgtcaca
      121 aaccaccgct gaggagggct tgccacctcc tcattctgct gaggggacag caggccattg
      181 gtctgaggga cggttctctc accgttgtag aacctggctg ggggcaggtt gttgacaaat
      241 tgttcttgga agaatggctg cacactgtat cgggcgccag ggacaatctg gtgggatcta
      301 ggagaatccg tgggagatgg agttaatctg tcattttcgg aagctgtgta catgctacac
      361 tatttcagta cttaattaga aatctaattg gtgatttact agg
//
LOCUS       KCPA01001205             571 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 132322tic ultra-conserved element locus
            uce-6468, sequence.
ACCESSION   KCPA01001205
VERSION     KCPA01001205.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 571)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 571)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..571
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="132322tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>571
                     /note="ultra-conserved element locus uce-6468"
BASE COUNT          186 a          100 c          102 g          183 t
ORIGIN      
        1 agacattcat atggacactg gaattaatca gcctcaagtt tgctttccct taaatcaaag
       61 ggtcatgtga aggtagggag aagaattcgc agtggtaagg actgcattcc taattttgcc
      121 tgagataact cccagtgcct tgaattgctg attattacaa tcaccaacag acacacatat
      181 atattcctct cacatttgta ttcattttac tttgactcga ctggaatcat aaaaggaatg
      241 tgtaaacgag gagagcctgt tgctgaaatg aagttgaatt ttttccccac agaaacttgg
      301 gttcatgaca gctttttgtt gggcaggaca ttagcctttt gtaatttatt gcttttagat
      361 taaatcttgg gaaactcaat attgcagttg aatgattaga gcaatacccc ttggagtaat
      421 aaattttctt tggtgctatg catctcccga tcatgtttcc cttctaatta catttacata
      481 aatgatattc tgcaaaatta aattaacatt caaaccgtta tgctggcaag gagagacaaa
      541 aattagttac aaacttaaaa aaaaaatgaa a
//
LOCUS       KCPA01001206             493 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 132434tic ultra-conserved element locus
            uce-6407, sequence.
ACCESSION   KCPA01001206
VERSION     KCPA01001206.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 493)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 493)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="132434tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>493
                     /note="ultra-conserved element locus uce-6407"
BASE COUNT          162 a           79 c           89 g          163 t
ORIGIN      
        1 aaaaacttaa gaacaggtat gtgatggtgt tcaaagaaaa tgcagtttag tgcaagaaat
       61 gctgaacctc aatttttagc agtgacattt taatgatggg aagtctgcaa aattatttgc
      121 catcaattgt gaaggcaata acaagccttg gtggtttttc acaccctctg tgttaagtgc
      181 tttcagaatg acagcgtaaa ctgtgttgga gaactccaag gaagtaaaac tgattaaaat
      241 gttcatgctt gaatggtgct gatggaatag ttcatttgga ctttctctgc ctcctgcagc
      301 tcaagctgaa atattaaaat tcagtgaatt taaatctctc tcccctcagc tcaggaaaaa
      361 aacattacat tttaataggt tttaaactca taattcattg gtttggagca gcactattaa
      421 atctatttaa atattacgtg tattactaag gaaatgattg aaataatttt tctttaccat
      481 tctatgcatc tca
//
LOCUS       KCPA01001207             733 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 132545tic ultra-conserved element locus
            uce-1304, sequence.
ACCESSION   KCPA01001207
VERSION     KCPA01001207.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 733)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 733)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..733
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="132545tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>733
                     /note="ultra-conserved element locus uce-1304"
BASE COUNT          202 a          160 c          191 g          180 t
ORIGIN      
        1 cccccagctg attatccacc tcatgcatag caaatgacgg agcgggaggc gcctccgcca
       61 cggctgaata aaatatttac agactgacag gctaatggac actttgccaa agagctgttc
      121 gaaagaagta gtaaatgggc ccgtgctgat gcagggcagt gggcccggtc agggatcagg
      181 acacacggca ccagatcgga taacatctaa ttggcaggtc acatccaaat gagtgtagtc
      241 atgcatcatc cggaaggctt tctgctggtt ataaagacac ttgtaaacaa ttcagttgct
      301 gaacatggca ataatatgtt gatccggcat gtaatgaggt gttcctggaa tcaataaact
      361 agtcatgaag agcagggagc aaggtcagcg cctgcctttt tgatgacctt tgctggctgg
      421 tgaggacatc atatactctg aagaggactt ttctcatatt gcagaaagcg ccgagtgtca
      481 gaacttccat tcgcagcaag caaatgaaca gccgggctct gcatgctaat gaagtccagg
      541 ctattttcca ccttttcatc tgcacattat gctcttgact ttggagaagg tgggaattag
      601 gttggaccct cgtgtcagac tgcctgatgg cttggctccg gaaaactggt aattgaagct
      661 gatgactgat gcggaggagg cctgaatttg gaaataaaca gtttcaagca ctgcatgtca
      721 tttctagaga gac
//
LOCUS       KCPA01001208             801 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 132658tic ultra-conserved element locus
            uce-3198, sequence.
ACCESSION   KCPA01001208
VERSION     KCPA01001208.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 801)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 801)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..801
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="132658tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>801
                     /note="ultra-conserved element locus uce-3198"
BASE COUNT          218 a          174 c          154 g          255 t
ORIGIN      
        1 ggaagccaca cttgtattca ttttagtggt tatcactgta acagttaaca aaagacacaa
       61 agacatccat acccaaaaca gcatatgaag atttaatttt ttttttaaat ggcacataca
      121 tttaaatagc tcctacattt ggcaaggcca ttgttgtggc taatgtatgt atttctgaaa
      181 acaatgatac atttccagta gtatcttcca caattttttt tcaatgagca ataaaggagg
      241 ttgaggtggg atgtgtttta tcccaccaca ttatatcatt cctctttttc ctctttgttg
      301 gatggcaatc aggaaccctc atgccaagct tgggaagcaa cagcatctgg ttccttggca
      361 gattctgcag gcggtcttgt tgccagcctt taagctgtgt ctgggtctgc tgcatggttt
      421 ggctgcagat gggctctctg ggttgccttg tgcttatggg tgccagtttt ggcttacctt
      481 tgattctgag gactttactc atttttattc gtttgtgaat aaggacccat ccaaatgctt
      541 catgaaacca atatcagagt gtgccgatat ttaaaatgaa aagggaagga ggccgtttcc
      601 cttccccctc ccctccccag gataaaacat tataatagca tctgcaaatg gatctggatc
      661 tatcagtatt tccattataa atcagaggct tagagcttag ccatgaatat tcctcccaga
      721 atgaaatgca atgcggccac ttgtatcaaa acaacactga acattttttc agaccatcta
      781 ggcattccca cactcacttc c
//
LOCUS       KCPA01001209             624 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 132770tic ultra-conserved element locus
            uce-3565, sequence.
ACCESSION   KCPA01001209
VERSION     KCPA01001209.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 624)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 624)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="132770tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>624
                     /note="ultra-conserved element locus uce-3565"
BASE COUNT          179 a          149 c          116 g          180 t
ORIGIN      
        1 tgctgagcaa tacacacagc agcaataatt atgaaagctc ttttctatac aaggaagctt
       61 cagcctgact tacaaggtgc tgagtcaaaa gtcacccctc ccacagctga accctgccag
      121 gcaggatgct gtggaaattg tatagagttt gattataaaa ctgggcagtg gagagctgcc
      181 aggtcagcca tctgtcaaaa ccaaaagtgc tctgcttttc cactattcta ggagctgtac
      241 aaacatcagt gacaagggaa caaaatggaa cctgtgttgt gcaaacagga actttttgaa
      301 gtatttctac tttgaatttc ttccgtgttt gcacagttgg gaattttttt gccccttctt
      361 tgattgtact gacatttgct tcctgtaaag tgcacaaaaa ctgtactgac cttacgtcta
      421 ttgcttaaag catttcacca cctactcttt tcatgatttt gacaatgcta atgagcacag
      481 caagagatgc tctgtgagct gcagcaatcc caacagaaca tccctgttcc acgtgctccc
      541 acagcagttt caatgcagac ttactcatcc acttctctac agcctgtact taaactccaa
      601 agagagacca tttttcaaac attt
//
LOCUS       KCPA01001210             586 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 132878tic ultra-conserved element locus
            uce-6645, sequence.
ACCESSION   KCPA01001210
VERSION     KCPA01001210.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 586)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 586)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..586
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="132878tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>586
                     /note="ultra-conserved element locus uce-6645"
BASE COUNT          154 a          112 c          124 g          196 t
ORIGIN      
        1 atcaagaggc agtaattaaa accttctgaa tgaagggaac tttgatacca acgtccaggc
       61 atatttcctt aattatccag ctttgtggca atcaggttct catttattgt gttttgtaat
      121 tgcatattca tccagctctt atcacaaagc tggatgcttc ggctttgttt tccctccctt
      181 aaataattta tatgtaaggt tcagcaaatg gaaccttgct acttgtgtga agctgccatt
      241 taaccatgaa gtgaaatgct tttatcgagt ttgccctgca gatatggtcc gctgtggcag
      301 tgctgtccat atttggtggc tgtgcaagga gagccaggtg gtgctgcaaa gcatagcaca
      361 gtgaagcgtg gacagatcta ggtttgacat ttgtcatcct gtactgctaa agggaagaga
      421 aaaatctgct tttccatatg cttatgcttt aatttttgcc tgcagttttg tccagatggc
      481 cctgtgaaca ttgtttactt taagatgctg tcccagatgt ttttgaatgc cgatggataa
      541 atgcaacaac tgtggtatac taatacacaa attatttcca caattt
//
LOCUS       KCPA01001211             624 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 132988tic ultra-conserved element locus
            uce-1191, sequence.
ACCESSION   KCPA01001211
VERSION     KCPA01001211.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 624)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 624)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="132988tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>624
                     /note="ultra-conserved element locus uce-1191"
BASE COUNT          208 a          114 c          111 g          191 t
ORIGIN      
        1 ttttttaaga cttacaacac acattgcatt tttaaaataa catcagggaa actttgaagc
       61 ttcttttgaa ggattacatt acagctttga tttttattta taaaacataa aggactaata
      121 tatatcagtt aggacatttt gcttccaaag tgcattgtaa caaaataatt ggaaggcagt
      181 tgtggtgtga aatatatgac agctttacag gacataaaaa gcagcttttt ctttgtaata
      241 gtgtaattgc cttaaacccc acaatcataa ttgttatcaa aaaataatcc caaggaaagg
      301 ctaatataag gtgagcagac tattataaga gctctaatac actcaattcc ttgaacggca
      361 aatgcagccc ctcaatctcc cagtgctttt agtgtcagtc agagagcact cagtcatttc
      421 tgtgcatcaa gcctgcagta ttgatttttc cactgactga aacagccata taagcataaa
      481 ttttgcatga ggctttcact ttgtagactc tcctttggtc agatgacaca tgatgtgaac
      541 atggagactg tataataaca atgcatggtc aacctgcagg cattaaagcg tggtctctca
      601 cagctttgaa ggacaaaagc tgga
//
LOCUS       KCPA01001212             800 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 133100tic ultra-conserved element locus
            uce-3104, sequence.
ACCESSION   KCPA01001212
VERSION     KCPA01001212.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 800)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 800)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..800
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="133100tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>800
                     /note="ultra-conserved element locus uce-3104"
BASE COUNT          246 a          181 c          146 g          227 t
ORIGIN      
        1 ggtttaaatt ccagtaacag gtttcatatg gtcgctataa catctcagtg cattaattag
       61 cccccaagca ataaaaatgt agccattcaa ggtcacagtt tgacttactt acaattgatg
      121 tataacttgg caaactctgc attcagctac ttcgtacaat aggaaatata ttgtcattca
      181 ggttaacaaa agattctttt ctttgccacc tcactacaat ggccctgcaa atgaacatcg
      241 cctgaataaa atcctaacca cattttcact ctcattaacc acagtagggt atcacacaat
      301 ttgcctggct cctacttaga ccactgtgca ccattttact agcagcagtt tgatgggttt
      361 tatggcaggt gatatatgga gtgggagttt cgggagtcgt aaacagaagc cacagtgtat
      421 cacaatgtgg tttagggata taatgactgt gttgtaaagc aaaggatgac aatactgcac
      481 taggcttgag gtagtgaacc aatagaccaa acagctcaac ataattcaag ccacaaacag
      541 agcatcctag gtgtgtgctg gccttcctat atatttcatt aattacccct gatgaatttg
      601 aataagaacc actaaaactg aaataaatct gcagccaaga gaaaaattat agagtttttc
      661 cctgtatttc ttggaaggag ttgctctcct ccgtgcatac acagacccca tactaccagc
      721 tcttaaccag ccttttgtac ctccagctag accgtctcct tggctgctgg ggctgctctc
      781 attaacacac cagaacaaat
//
LOCUS       KCPA01001213             342 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 133201tic ultra-conserved element locus
            uce-7581, sequence.
ACCESSION   KCPA01001213
VERSION     KCPA01001213.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 342)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 342)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="133201tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>342
                     /note="ultra-conserved element locus uce-7581"
BASE COUNT          116 a           43 c           60 g          123 t
ORIGIN      
        1 atacactttc tttcatcatt agattgttgt tgattacaat tagaaaactt atagctttga
       61 aattatcttt tttatgacct tgtggtagtt taaaagcaat acctcattgg ttaaataggt
      121 tttagttcat gcttcccttt agttaatgat ctgaaaacat attatcctga tttacacata
      181 aaatcatgct gaaaagcatg tggcattcac taggatatgt gtgtttaagt agaattaaat
      241 tagcagtgag agttattaaa gaaatcttcc atactattgt ccagtggact gtgatctgta
      301 gagaaattaa taataaatga agcagtgcat atgagagaag ag
//
LOCUS       KCPA01001214             550 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 133314tic ultra-conserved element locus
            uce-5773, sequence.
ACCESSION   KCPA01001214
VERSION     KCPA01001214.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 550)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 550)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="133314tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>550
                     /note="ultra-conserved element locus uce-5773"
BASE COUNT          151 a          127 c          105 g          167 t
ORIGIN      
        1 cctgccgtgc caggaggttt gtaacaacaa atctggcatt ccacaactac ggcatctcgc
       61 taacgggctg aggcaccgga gttcagtaat gtaatataaa aagtaatggt gttagctaac
      121 acatccttaa taagatattg tctgctgctc tgccatatgc taccgagcag gctttccctc
      181 tgtggggctt ttgagttctc tcaataagat tatttcaaat actctaatcc tgaatcattg
      241 acatgaatac aaaagcctag tgacatctaa tagatgcctc ttagctttgc ttttcctctt
      301 gtccctttcc tttttcttct ctttttacct gacaaaaagc ttacagacac ttgggctctg
      361 tctctcagta ccagcatgtg ggtcccctca tgaaatacaa aggaggaaaa cgggctgaca
      421 tagggctgat aagccacaaa aggaccatag aattaaaagt aaatgccagt aaatcctacc
      481 ctgtacactc agttgttctt tttttcttta attcttccag tgccatgctg ggctaatgaa
      541 aagtggtgct
//
LOCUS       KCPA01001215             783 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 133423tic ultra-conserved element locus
            uce-3416, sequence.
ACCESSION   KCPA01001215
VERSION     KCPA01001215.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 783)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 783)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..783
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="133423tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>783
                     /note="ultra-conserved element locus uce-3416"
BASE COUNT          300 a          127 c          121 g          235 t
ORIGIN      
        1 cataagaaat tctagcctaa tcatgcaacc tccatgttaa tttaaaaaat agtccttgat
       61 tttgaaatga agttgaaagt atagtgtcag aacaaagtga aagagttatc attagccttc
      121 aaatgtgaca aataagaaag acacaaacaa gtgtcaggat aattaaaaag gcattgttca
      181 ctttttagaa aaaaaaaatg aattgcacga gaaatattaa gctaacaaag aaagagcaaa
      241 tatgagtaga aaaaatgaca gttatctgca aaattcataa atgtgtcttt tgtataactg
      301 taatgatcat attttatgct gtcattttac atttaattgc tcaccctggt actttacttc
      361 atagcagcca tcagtacccc acagagccag atgctgaatt gcaaaaaaac atactgtgac
      421 cacagactta taggaaagta actttgctga gctgtggtgt atgacaagtt aatttttgca
      481 attatacttt ttccaagaat aaatgaaact gcaggtcatt actattctat atcattaaaa
      541 agaggcagaa aatgttcttg atcataaagg cctcaaactc attttatcat tactttgaca
      601 tatgaaagca actttacaag ctgcttttgc tcaatgtgac ctaatgaaat aagcatcacc
      661 tcagctgaaa tatgtaaaca tcttgataca ttaagacgca cataagtaaa gaatattgtt
      721 attattacac agtgctaacc catcatatgt cagaaaagaa atactatatg ggctctgctt
      781 act
//
LOCUS       KCPA01001216             753 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 133534tic ultra-conserved element locus
            uce-408, sequence.
ACCESSION   KCPA01001216
VERSION     KCPA01001216.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 753)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 753)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..753
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="133534tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>753
                     /note="ultra-conserved element locus uce-408"
BASE COUNT          216 a          154 c          169 g          214 t
ORIGIN      
        1 ctgccatcct cttccttctg gcccgagagg aggagaacgg gctcagactt ggtgctcagc
       61 actctgccca agcaaagaaa ggggacttgg gcatcatctc tgttaatatt tatgcccagt
      121 ggacctggaa ctggattgca gttgtttttc agaatgaggg agatgtaaat tacgtgtaaa
      181 tccaacatgt ttagctccac aagtttttat tatccttctc ttattaagaa gctttcaaaa
      241 tattacccag ccactgaagg ttctttaaga aaaatatgac tgctcgtgta aacaattaat
      301 ggttgttaag cgtggcagtg tatattatga caaacaacac atgctacatt atgccagctg
      361 gtgtaatgat gtgataatgt ctgactcatt aactctggca cacagtttac gatgcccttc
      421 tatgacagga ttaattgatt cacacataca ttaaaacaaa aataactaaa ctgaaattca
      481 gctggaagcc tggcttctca tttgtcatca gccctgttgg tggctgcagc cagtctgggc
      541 ccagtgcaga gacagctgag gtttgacccc tgacctctgt tcaactccat gagtatcttg
      601 tggaagggag gaagtgatac tgaaggagcc ctgcaatgac tttcagatat tctgggactg
      661 tctggatcaa gtaattaagt tgaaaggtga aaataccttt ttgcctgagt aaagccaatg
      721 catggcctct gtacagagcc aagagatagt tag
//
LOCUS       KCPA01001217             678 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 133646tic ultra-conserved element locus
            uce-2471, sequence.
ACCESSION   KCPA01001217
VERSION     KCPA01001217.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 678)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 678)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..678
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="133646tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>678
                     /note="ultra-conserved element locus uce-2471"
BASE COUNT          213 a          116 c          134 g          215 t
ORIGIN      
        1 atgaaactgt taactttttt aactcgggca ccttttgaga atttttgttt gttccatcag
       61 agttgctttg aattaaaaca catgtactcc atgaaatgtg tgatgaaaag cacctgacaa
      121 tttcaagagg ttaagtggcc atgatctgca ctgtatgtac tgcagctgag aagaagatgc
      181 agtttgacat agtatctaat ttgctgtgac attcaagttt taagtgatat tcaaggagat
      241 ggaagccctg gctctaaaca tatcccaacg tgtgctggtc ttctgtctgt taacttacta
      301 atgaaccatg attgagtaaa gtaatgaaga gtttacagag agccccagga aaccaatttc
      361 caattttgca accagcaggc tttaacttca ctgcagtctt tttttgtcta ggaggggact
      421 tggatactaa atgccgtttc tactttgtga atcagacaga cttttccagt ccctgaatac
      481 ttacttgcta atgaatgtct cttctacaga tccattttat ttccatctgt agttgttaaa
      541 aataggctga ataactaaaa atgattactg agagaaatga aattataatc acaaaatcag
      601 aggcactgtt agactcatgg tgagaaggaa attttaatct tctctgggat gagccatgga
      661 aataggtaaa aaatacag
//
LOCUS       KCPA01001218             567 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 133754tic ultra-conserved element locus
            uce-1919, sequence.
ACCESSION   KCPA01001218
VERSION     KCPA01001218.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 567)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 567)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="133754tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>567
                     /note="ultra-conserved element locus uce-1919"
BASE COUNT          191 a          103 c           84 g          189 t
ORIGIN      
        1 tttttcagcc tattaagttc tccagtatca gaatgaagcc tgctaaaagt tagtaaataa
       61 aggctttcag gagagcttta ttaaatcact tatgacttat caagttaaaa ctcccactca
      121 gatatcttaa taaaactttc agagaatata tttaattttc ctggaaatca gaagccaatt
      181 actaactaca ggagttactg ttggctatgc cactgatcaa tttgccaaca acttgaatta
      241 gttctctaaa gtttcagttt ctgaaggtca aataactatg taactgctta ataaagaagc
      301 aaagaagtac ctctaaatat ctccaagctc tgatgggctt atattctgct ccttaggtga
      361 ggtattagca aagcttattt attttcattt ccaaggcttt tatttgctca ttcccttgtg
      421 gtaaagctga tttccatgat gattccgttc ttaattttaa tacccttttt actcatcata
      481 tagacataag aattttccat aaaataatga aacccttcca aaggaaatga agacaacaag
      541 gagaggaaag taaactacag cttactt
//
LOCUS       KCPA01001219             604 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 133861tic ultra-conserved element locus
            uce-1478, sequence.
ACCESSION   KCPA01001219
VERSION     KCPA01001219.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 604)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 604)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..604
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="133861tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>604
                     /note="ultra-conserved element locus uce-1478"
BASE COUNT          197 a          100 c          104 g          203 t
ORIGIN      
        1 gctcaaagga ctgaacatac cagtagcaag ttctgcttca gacttcaaga gttagcttat
       61 atcagtctaa tttattcagt gtcattgctg tatcacaacc ttctgtttga ttttgttata
      121 aactaataat ttcctgaatg aactaatact gccatagccg ctagtacctc tttttttatt
      181 gttgtgtatg caactaaatt gaaatatctt tcacttgaaa tattgacttt aatatctcat
      241 ttgaaaaatt catgaagcct ttgatgttaa atccatactc aatttagcca aatgccatta
      301 gaatatgcaa tatgcctgaa tacagagagc attattgtct gtgtttctgc agaagaatta
      361 cattttatga ctgtaacgtc aggatctttt ttggatttgt tcacgaagaa aagaaagaga
      421 aaggcagcac attagaagca aaatgaaaag tggtattgat taggctctca tttaccctct
      481 ctttgcttga atccctaaat gcatggaaat aagggttgtg ccacagcaag taacaatgct
      541 ctgtaatgaa tgtaacaatc tttagaaaat tagtgtaaac acgtatgata gtgcacagat
      601 gttg
//
LOCUS       KCPA01001220             343 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 133969tic ultra-conserved element locus
            uce-3341, sequence.
ACCESSION   KCPA01001220
VERSION     KCPA01001220.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 343)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 343)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="133969tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>343
                     /note="ultra-conserved element locus uce-3341"
BASE COUNT          141 a           54 c           46 g          102 t
ORIGIN      
        1 tgtgaacaat ttgtgccagc aaaagttaaa gcgtcaaaga aacctcttta aaatgctaac
       61 aaatttactt acaaacacct atatttatta tttcataaat aggcgcaaca ggttccataa
      121 aaaagattaa atacagacac agtatgaaga aacaataata catagccata tgtagaggtt
      181 ataatttagc tgtctccaat ctgtttctgc atctaataaa atatcaggta agcataaaag
      241 gacttaaatg atgtttacta accagtacac ataaagtgat tttcaaaaaa aaagcattct
      301 ttaggcagta caaaataaat gtgtttgctc tttatcaaca tta
//
LOCUS       KCPA01001221             531 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 134078tic ultra-conserved element locus
            uce-7704, sequence.
ACCESSION   KCPA01001221
VERSION     KCPA01001221.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 531)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 531)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="134078tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>531
                     /note="ultra-conserved element locus uce-7704"
BASE COUNT          183 a           90 c          101 g          157 t
ORIGIN      
        1 tttttcttct gttttaagaa gtagaagaag agaaaaaaat attccatgtt cttggtggag
       61 aggtacagag tggatattat ctaaacttcc agtgaatcac agctgacagt gttgctattt
      121 ctaggccaga gaatcactct ttgaacaaaa tgcaattgct gtgtcttttc aacctgcgct
      181 tcagcagagt gaaacagcag gattcccgta ctgtataata actgtcagaa acaatttctg
      241 ctctgtaagt gaggtgaagc aaaatgtcaa aatatttgaa tacatttcat tgaggatatc
      301 ttcttttaaa ttagtgaagg ctagaggaag agattcctat tctctcgcat aataaatatg
      361 catggaacag tagggccaag tgaattctaa taaagctggg tcctcgctcg ttaatgtgtt
      421 agagaacaac aacaataaaa cacaataatt attagttaaa gaaatgccaa cactggcctt
      481 ttaccaacac tcctgaacat ataaatcgca ataaatttag actgtctgaa g
//
LOCUS       KCPA01001222             362 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 134185tic ultra-conserved element locus
            uce-2510, sequence.
ACCESSION   KCPA01001222
VERSION     KCPA01001222.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 362)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 362)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="134185tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>362
                     /note="ultra-conserved element locus uce-2510"
BASE COUNT          122 a           68 c           62 g          110 t
ORIGIN      
        1 atgtataaaa atatagtctg tattccattc ctgcataaac tttaagaatc tttaaaagta
       61 tgttcaaaat tatgtgaagg gtaaaattat gaagttcccg cttggaagaa agtggcttaa
      121 attctatcca attatttgcc atggcaacca gctaaacaca aaagggctgg aatggatgta
      181 gagtactgcc tctataatca tcactgtatg tccttcaaat catggatatg cagcaccact
      241 atcccaatct acttcagggc cataaaccta cacagtaatt atatgctttg gaacacttca
      301 cttaagtgca ccaataatat agtgagtgaa catgttcttt aattctgcac ctgtaaatgg
      361 gg
//
LOCUS       KCPA01001223             628 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 134289tic ultra-conserved element locus
            uce-7831, sequence.
ACCESSION   KCPA01001223
VERSION     KCPA01001223.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 628)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 628)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="134289tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>628
                     /note="ultra-conserved element locus uce-7831"
BASE COUNT          154 a          140 c          137 g          197 t
ORIGIN      
        1 gttcttctgg attgcatctt tgcatatgaa atttcagcct agagctaatt gttactgctg
       61 atgaattata aactgctttg aaattccggc atgttcttga gtacagtagc atgatcttgc
      121 ttccctggta aataagccat ataagttctt ttaagtcatc cacagttttc aaatcctcat
      181 gcatttcttt catgattccc ctgtggaatt atccttgtgg ttttgaaaag gatagtctca
      241 agtctgagcc tgtgcttcca agtcctgctc tctgttgcct taggagtata cagaggttta
      301 gattgcatct tttcaatgca ttatggcact gcagcctaaa gccaatgctt gttttttaac
      361 tggcaacctg cctgtacgaa tggaggaagc agattgcctc tttgctgaac acttagacaa
      421 ggtactgatt taacaacagt ggacaagcag ctgggagctg ggctgtcagc ctgtcacaca
      481 ctgacaaatc tgttgttcat attcaggcag gatgttccag ttagattgcc atcagtatca
      541 tccatctacc acaggcgtgc gaggcgcgcc ggcgtctccc gcgctggtga ttcagctttc
      601 tgggggaacc tcaagaaaac agctaatt
//
LOCUS       KCPA01001224             569 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 134397tic ultra-conserved element locus
            uce-6613, sequence.
ACCESSION   KCPA01001224
VERSION     KCPA01001224.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 569)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 569)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="134397tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>569
                     /note="ultra-conserved element locus uce-6613"
BASE COUNT          164 a          105 c          115 g          185 t
ORIGIN      
        1 tcactgtcct gagcagccaa tgtcatccac tgagtcagtt atttgttaaa ttgcaagaaa
       61 ccaaaaataa cgtatttgtt gatataaata gtgggtggac ctgattttcg tggcatgaaa
      121 gtcaagtgga gtttttaatt gactccaaca ggctctggat caggcctgtg gggtgtttgg
      181 tgctcagtta caagttagtg ctctctctaa tcaccttgtt ctctaaagga aatagatact
      241 aaacaggaac catctggtaa tacattctgt acctcttaat tacaatgttt tgagtggcac
      301 ctaaataaat ttcatttaca agcacatgac tgcttgtcaa aagctctgtt gataatttta
      361 ttattgtagt ttaccttctc gcttaatgac cccagcccag taaagtcagg aatattcagc
      421 tccgttgcag taattgtctt tagaaaggta caaactccat ctctcatggt gtgtttctga
      481 ttattttcaa gttacacatg acgtggggat ggatctgcaa taaaaattac caaaattctg
      541 ctttcttggt agagaggaga agctgaggc
//
LOCUS       KCPA01001225             452 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 134501tic ultra-conserved element locus
            uce-4167, sequence.
ACCESSION   KCPA01001225
VERSION     KCPA01001225.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 452)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 452)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="134501tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>452
                     /note="ultra-conserved element locus uce-4167"
BASE COUNT          170 a           66 c           72 g          144 t
ORIGIN      
        1 atatttatac tcaaacttca gaggataaag acaatagaaa gtgcaaaaat caactgaaat
       61 actttcagaa ataatttaat tctcatgtca ctgctgactg acagctctaa taaattctta
      121 cattttaagc agacttacat ttcacatgca tttgctcttc actgctgagc agagtggaac
      181 atctattgtc aaatgcataa aataacatta gaaatgcaaa cttaatgtag ccaatggtaa
      241 tgtgttattt aaaacttatg agcctgaata agggcttatt ttctctaaat tgaaatttat
      301 agtttcattt taaagtacta acttgaatat tgatgggctt caggcatgct gttataaaat
      361 gggaaagaaa acaaagcaag taactatgag gcataaagct gctattatgg taatatatgg
      421 aaacttatat aaaaagtgga tcctagttac ct
//
LOCUS       KCPA01001226             593 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 134715tic ultra-conserved element locus
            uce-3309, sequence.
ACCESSION   KCPA01001226
VERSION     KCPA01001226.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 593)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 593)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..593
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="134715tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>593
                     /note="ultra-conserved element locus uce-3309"
BASE COUNT          193 a          114 c           94 g          192 t
ORIGIN      
        1 aaagtaacac atgctcagag atggatagca ttaaaataaa agtaggtgca atatccaaga
       61 tgaacatttc tcatgagcag acatcacgcg agaaagcatt ccacaggcat aactttgcag
      121 ataatcaaag ccaagtatta atacattttt atcagtccac cttctaaaca atatttcagt
      181 agatttcctt tcacacagtg atatttgtaa taaatgttct gcctttgttt taaagtcagt
      241 ccgtagaaag atgacatcag cttagcaaac aataaagtgc ctgtaatatt gtctccagag
      301 ggctgttaca tttactttgt agcagtaaaa ttcaattttc aaaaaacact acatgaatga
      361 tgttaggtta ttaaccctat caccaccgta aaacatcatc attgtgtgca gaatgtaggt
      421 cactatctag gagttagaag ttgctttttg ttaaataatc catttaagct gcttttcttt
      481 actatagctt gggttgtgtc ccttcccttt gcaaaccaaa aaacagtctc atttttaatc
      541 tcaaggctct gagcaagcgt ccttattaca catctcattt taaggtgttc ttc
//
LOCUS       KCPA01001227             826 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 134828tic ultra-conserved element locus
            uce-1490, sequence.
ACCESSION   KCPA01001227
VERSION     KCPA01001227.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 826)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 826)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..826
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="134828tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>826
                     /note="ultra-conserved element locus uce-1490"
BASE COUNT          255 a          136 c          180 g          255 t
ORIGIN      
        1 taccaattct atgaaattag ttcggtttct ggatcttcca ttctctgtgt gatgccttga
       61 cctggaaagt attataatag atactcctca aagagtctca gaaaggagct ttatattgaa
      121 atcaagcaat cagctagata atttagttgt ctttatttga gagcagtaaa tctttttagc
      181 aagtggaata aaccagtaag aataactagg agggaattta gggaagtaca caaagggtgt
      241 gtggtttaaa ccttttctgg aacgcaggct gcagtttagc tgtcgagtca ctatcattct
      301 cctcaaaggt gaaatgattt agaggcctag agaaacttaa tttttcttga tcaccatgtg
      361 caacctggaa ttttaatggc aggcataatt aattcttctg atgttaatca tcagggctgg
      421 gctccacaat tatcagccta gtgcagctgg ggcatggtgc agacatgaaa aattaggaaa
      481 atgaatcagt aatagggtgg cagatttaat ctgcatcatg aaaacaaagt taaaaagagg
      541 gagatcaaga gaatttcagc tgaagctttt gtgccaatga gcactgacag aactgaaaaa
      601 tgttgccgat gtccaaagtg attggtaatt accaagccat tgaatttttt attgtcaatt
      661 tatcattgcg ccagaggtta aatttaacat cttcttctaa agccatcact ctaggaggaa
      721 ggcaagcttt gcatcacgtg gaccaggagt cagtgaaagg ttaatcaggt atttctatag
      781 tttgtgtgtg cttccaaatc agtctttttg tgtcctttat gctgca
//
LOCUS       KCPA01001228             367 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 134934tic ultra-conserved element locus
            uce-2083, sequence.
ACCESSION   KCPA01001228
VERSION     KCPA01001228.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 367)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 367)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="134934tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>367
                     /note="ultra-conserved element locus uce-2083"
BASE COUNT          139 a           61 c           52 g          115 t
ORIGIN      
        1 aaaccctttg tagttgttct tttattatta tttatgaaca cctaggcagt gaaaactgtt
       61 atgttaatac atacatagac acacccaaaa catacaaaaa tactattatt tcaaactact
      121 aagaatagga caagttcagt tatctccatg ctatgacttt aagagcatta cactgaaaca
      181 aacaagaatt taaacgacaa ttttttaata tcccagaaat ataccaaaat atacatctaa
      241 gctttggaat tactgaggtt agactaatgc aagtgctggg taatcgtact taatacacaa
      301 gtctaaggtt ctgcaggaaa gaaattatct ttggtatctg catcaggcta ataatattaa
      361 catttgg
//
LOCUS       KCPA01001229             703 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 135046tic ultra-conserved element locus
            uce-1480, sequence.
ACCESSION   KCPA01001229
VERSION     KCPA01001229.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 703)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 703)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..703
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="135046tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>703
                     /note="ultra-conserved element locus uce-1480"
BASE COUNT          213 a          168 c          128 g          194 t
ORIGIN      
        1 aaaagcttga ttttacaaac tatttaatgc actctaagga tactgctaaa agacagtggc
       61 atgctgatgt gagttgtaca aaggtcagtg atttggaggc tctttcagac aatttgccag
      121 gattttggca ttttgtaagc acacatagga cagctctcca gcaagctgac cttgacagtg
      181 aattggataa ataaaccttc aatttacccc ctccagctcg atgctaaccc agctgatccc
      241 tctggagcct tcacctgtcc atatcgttca actgcctgca actttcaact gacgaacatc
      301 cacagcttta caggttctgt gacaaacacc atctaaaaga taaggcttct gaaaagtcaa
      361 agtcaatagt gtttccattg aaaatttaat gctgcttcca tctttaccca tcattcttcc
      421 tactgttgca tgcatcccag gaggcacttc aagcaaaagc actactccat aacaggtaat
      481 gacgtggcat ttaatgatac tgtccaaagt gatccaagcc catggaaagt aatgtgcact
      541 catgtaccag ataagcacag ctgaatgtac tagaacagca gtatctctca cggcactgtc
      601 actagataca atgtgacata tgctctgcca ttgtacctgg cttttccttt tacttcacca
      661 tcagaggaaa agagcatttt cagatacaga gcaccaaagt gtt
//
LOCUS       KCPA01001230             438 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 135158tic ultra-conserved element locus
            uce-5273, sequence.
ACCESSION   KCPA01001230
VERSION     KCPA01001230.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 438)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 438)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="135158tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>438
                     /note="ultra-conserved element locus uce-5273"
BASE COUNT          101 a          126 c           85 g          126 t
ORIGIN      
        1 aaatctctta attagctgtt acccccttga gccatatggc caccataggg attttaatac
       61 actgctccat tttatgtcat cagttgcaag ccgtggattc actctcacct ctgaagtgaa
      121 aacacggccc atctgttggc gatagcgcgt attcttttct acatttcctg cattgcatat
      181 gatttcaaat atttgctctt ggaactgcaa ggtgtcctac tgtcataaca gtcaagttat
      241 tcattaagct gtcagcacct ttttccattc cccctcactc atcgccgcgc gcggcccctc
      301 agaacgggtg caactgagat cctcatgtca acagaaaagc cctacctttt ccactgccac
      361 ccccaatttc cgagggcact aatggagggc cagctctgat gcagttcttg gcacgcactt
      421 ctgagggccg tgaagtct
//
LOCUS       KCPA01001231             697 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 135263tic ultra-conserved element locus
            uce-4138, sequence.
ACCESSION   KCPA01001231
VERSION     KCPA01001231.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 697)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 697)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..697
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="135263tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>697
                     /note="ultra-conserved element locus uce-4138"
BASE COUNT          234 a          117 c          115 g          231 t
ORIGIN      
        1 tcactatttg cataacagtg cctaaaagaa attaaaaatg gaattgcaac tttggcattt
       61 ttacttagac gcagtacatg aaatgaagac attgcatgac tgctcatttt aatgtaacat
      121 ccattttgat tcttcatcac actgtacatc tgcccgcttt ccccagctat ctcatgttct
      181 gtagcatttg tattgtgctc ctgaggatgc tttattggtg aactacatta aattcatcta
      241 gaaagaactt taaaaaaaag ccttttcata tgcccttagg attacttggc tagacttgaa
      301 tcaatttatg catttgatgg ttagtttcag ttgtcatgga taaacaaaag ggtaactgtc
      361 tagaatatat caaatattgt ttcattttga aatgtatgtt tccagctata cacatctcct
      421 accctgtttt gtaaaagtat tctgctgata aaatgtagac ttatgtttga cagcttttta
      481 atcaagttca aagagaataa ataaaactaa tccagtgtgg taaagagtct gtctggttat
      541 cgatttgttc ataaaatgaa aaataaacca tgtaaataag atgtgtgaaa cacagatcca
      601 gaagcaaata tttaaagcaa ttaaagaccc caaaacatag gattaatgca taggtctgct
      661 gtgcatgaga gatatgtctt caatatcacc tcagcag
//
LOCUS       KCPA01001232             612 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 135373tic ultra-conserved element locus
            uce-6356, sequence.
ACCESSION   KCPA01001232
VERSION     KCPA01001232.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 612)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 612)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="135373tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>612
                     /note="ultra-conserved element locus uce-6356"
BASE COUNT          186 a          133 c          119 g          174 t
ORIGIN      
        1 gaagctttgc tgctgatcca tgctttcttt gaagctctgg aggcagctga caacgagtat
       61 ttaagggatg tccccaagcc tctgccccca ccagcctgct attaactcgg ttaaaatgta
      121 tatgaccatg gaatcagcat ggagcatgga tgagaaggag agagggagga cctcggggcc
      181 aggcagttta caaacaggca tcacagccac tctgtccttt gccccctctt acatttctta
      241 ttacagtaca ttaaaaccct ttgctctgtc aaattgacaa aggcagctat aaaaggggtc
      301 ctttctaata cacagtaata taaactatgt ttgtacactt accacataat ccctaattac
      361 ttccatactt ttatgtgtgg agagctttga cgcttgcatt gctggatact tagtgaatga
      421 aataaaaatc agaaattatt tctgtataag tatcgggtgg tatgtgaatt agcttctagg
      481 ctggcgacag agctcacatt tcagaataaa tatactaagt gtcattgata ccctaagtgt
      541 cagataaaaa actatgacac caacaaaact ctcgtatgac cctgacattc ctccagtact
      601 taaagtaatt ac
//
LOCUS       KCPA01001233             680 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 135484tic ultra-conserved element locus
            uce-4179, sequence.
ACCESSION   KCPA01001233
VERSION     KCPA01001233.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 680)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 680)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..680
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="135484tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>680
                     /note="ultra-conserved element locus uce-4179"
BASE COUNT          197 a          161 c          173 g          149 t
ORIGIN      
        1 cagctctggc cgtcctcagt gcagcctccc cgtgcagaca gaccgactgt attttatcgc
       61 gtgcagatat cgacagatga gaaaattact gtgcccataa attgaagctt tggtcacgtc
      121 agttcaagaa gcagaacaga gccaagaaag cagcttgtgt cagtcaggct gacgagcgca
      181 ggcgccaaga aacacacccc tgcgagacgc aagcacccgc acgcatgcag agaccccgct
      241 cctcttcatc tattctcagc aactgtttgt ctgaggccac atgcaactgg atttgtcaag
      301 ccccctttta acaacttctt gtcacagtcc attaccaaat tgcatatagt tatatattcc
      361 actaattagg cttctaaaat atcattaaca tgtctcttga tcattagcat aacgtatgag
      421 gcgtcctcgt taggcacgac tcgagtttgt taatgcggta atgaaaggca cggggctggt
      481 actgcaggag ccgtgcagag ataggaggct gggaacatca aaagcatcag tgccaggctt
      541 caacaagatc agcaagaagc aggggcagaa gccaattgct gggaaaccag ggtgatgtgg
      601 aaggtgaaat ctggatatag cacaggtata ggaggatcac agaaggatct gggtaaaatg
      661 ggagcaatgg ccagggtcca
//
LOCUS       KCPA01001234             544 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 135595tic ultra-conserved element locus
            uce-7653, sequence.
ACCESSION   KCPA01001234
VERSION     KCPA01001234.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 544)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 544)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..544
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="135595tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>544
                     /note="ultra-conserved element locus uce-7653"
BASE COUNT          163 a          117 c           82 g          182 t
ORIGIN      
        1 gaagtcgtgc tgcacctgca ttcttagtca gttccttata ggtgactttt ataaaattgt
       61 cctgttccaa ttcttcctga aaaatacagt ttagagggag tattgtcaaa aattctgctc
      121 tactttatta tcccctcatt ttttttgtca tttaactcca attatgggat gctaagtgct
      181 tttggaaatt tcattgttaa tatcttctta cagtgctatt aacgtaaatc aacgttaata
      241 gtgtcccagc aagtataaaa gcaatcaaaa attcagtact cacgaatcat tctgtaattt
      301 cagcataaaa tgttaataga aataaaatcc aataccataa aatatcagca aattcaactt
      361 taaatacatg tgatgaatga ctttaccatt ctacagcatc ctgtggactt ttgcagggga
      421 agcctcttct cagcaaaggt cttgccccat gcctccctcc tccattgcct tcccagcacg
      481 aggtgtgccc aggattttac gtttccagaa attaaaaatc catcctcact tatgatgtgg
      541 catc
//
LOCUS       KCPA01001235             509 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 135705tic ultra-conserved element locus
            uce-4180, sequence.
ACCESSION   KCPA01001235
VERSION     KCPA01001235.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 509)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 509)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="135705tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>509
                     /note="ultra-conserved element locus uce-4180"
BASE COUNT          160 a          113 c           76 g          160 t
ORIGIN      
        1 ttgtggacct tcaaaatatt gcaagccaga atccactatg ctttatttgt attgctttac
       61 gaagaaagtc tggattaaac tgatccttca cttttctgca ttcataggaa gttatcattt
      121 tgataactga gccaattatt caatccctct tctccatccc caaatgcacc ttctctcatt
      181 actaaaattg caaatcacct ttggctaatg aagaaaactt tgaaatttaa tcttcatcta
      241 cctacatttg cagtccttct ggtttttggc aagttcaaag ccaggcctac attcacaggc
      301 aaccccacct ttgggtgtct cccggcagat gtgcgcacac ccatgatctt tgttcataca
      361 gttcataccc tctgtggaaa gaaaaataat attagtatta aaattacaag catatccagt
      421 cataatttta tctgtaactt ttatctggac cacgttccac aagacaaaag aacagagctg
      481 aaaagaggta tgtagtaata ataaaagac
//
LOCUS       KCPA01001236             705 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 135817tic ultra-conserved element locus
            uce-1995, sequence.
ACCESSION   KCPA01001236
VERSION     KCPA01001236.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 705)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 705)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="135817tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>705
                     /note="ultra-conserved element locus uce-1995"
BASE COUNT          191 a          143 c          157 g          214 t
ORIGIN      
        1 ttttcccaat ttgactcgct tgcccaatcg tatttttact tcagccttta ggcttgaaaa
       61 agcatgtgca taatcagttc attttgtgtg gtctaggcta taaaaatgcc ccctctgttc
      121 tttccatatg aaaaacgtgg ttttaatttt ggggaactta tataattttc tgtgctttct
      181 tttgtatctc agattaaaaa caaatgctcc cttcccctaa ctttgcatgt tccaattatg
      241 gagttgtgaa aataagtcat ccttcagctt ttgttacttt aaaacagcta tcggtgatgt
      301 cagagtcaat actaaaagca ttaagaatgc tggcagaatg taatgcagct gcaatccaac
      361 atgatgttgg aaatggggtt gagagcataa aggctttcca tattcccagg gcgcacaact
      421 gctcgcggcc ttggctttga tctcttcaaa ggctgctgcc tcctcctaga tggagagact
      481 tggctgccac tcgctcgcat tgaaaaaagg cagaggtctc tattcaggca gaaatcaatc
      541 actgtgcaga aacaattatg tgtaattcaa ccatcatgaa aacagggtga gattatgggt
      601 ttgttacctg agtgactgcg tggagatggg gagcagcgga cgcgggagtc ctgctgacat
      661 gccacatctt gatgacaatt atagacacat gaatgatgtg gcggg
//
LOCUS       KCPA01001237             517 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 135928tic ultra-conserved element locus
            uce-7928, sequence.
ACCESSION   KCPA01001237
VERSION     KCPA01001237.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 517)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 517)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="135928tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>517
                     /note="ultra-conserved element locus uce-7928"
BASE COUNT          138 a          145 c          130 g          104 t
ORIGIN      
        1 tccgtgtgcc ccaggggcgc ggaacatcac gactcgagaa ctgtggggca ggatagggag
       61 agggactccc ctttttcgtc ccccggtatc tcaagttgtg ggttgcgatg agaaaaagtg
      121 cagaaaccag gtggtttgtg aaggattaat cctttgcttg cttcaaatct gaacaggaat
      181 ctccacacaa atgccccaca tgtggaagaa cctttaatca aagaagtaac ctgaaaactc
      241 accttcttac ccatacagac atcaagccct acaactgtga gcagtgcggc aaagtgttca
      301 ggcgaaactg tgatctacgg cggcacagtc taactcacac cccgcggcag gacttctaga
      361 gcagccaggg acccgcgccc gctccggcag ctccaacttg cccactttac tcaaggagtg
      421 tattgtagga actcacagca cacacacgga gacacgcacg cagactcggg gccaagcttt
      481 cctaccacat gtctgcgaaa ctcgtttaga gagtgcg
//
LOCUS       KCPA01001238             388 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 136036tic ultra-conserved element locus
            uce-4081, sequence.
ACCESSION   KCPA01001238
VERSION     KCPA01001238.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 388)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 388)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="136036tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>388
                     /note="ultra-conserved element locus uce-4081"
BASE COUNT          139 a           78 c           61 g          110 t
ORIGIN      
        1 taaaaataag gataaaagtc tagctcatta tctccaaaag tctgggaaaa cctagattgg
       61 ggaaactaaa tccagctagc tctctaacaa taatacagca gggtgaaaag atcaggacga
      121 ctttatacac attgtgctaa ttactgcaag tacttaaagt tgtaattagc ttattatact
      181 gcagagaacc taacatggca tgtctttcaa aaaaaatttc tctccagatc attagtggga
      241 aagctaacaa catctgcttc aaataaaatc aaccaattag cacaggcaac ttcgcatagt
      301 ttgcaatcag agaattatat tgtgccaagt gctaatttca atgtgaattc tatctccttc
      361 ttatatccca cgcttatctg ccagcaca
//
LOCUS       KCPA01001239             658 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 136146tic ultra-conserved element locus
            uce-6095, sequence.
ACCESSION   KCPA01001239
VERSION     KCPA01001239.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 658)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 658)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..658
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="136146tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>658
                     /note="ultra-conserved element locus uce-6095"
BASE COUNT          182 a          136 c          125 g          215 t
ORIGIN      
        1 catgctgcat ttgatacaaa agctgaatat tctattagac aggtcctgtg aagttaaaaa
       61 gaggagcggg ttgagttatc tcaccatggg aaaaaggcat gcacaatcag atatttaaca
      121 ctcctttgca attatgggaa tttttattct ctccctggta gggaacatag cattttactg
      181 cagtgtttca agtttgcctc caatggtatc tgatagaagt gcttttatcc cctgaagata
      241 cagtacaaaa tacaaatcat cattggtttt atctcagctg gagctgccta ttttctaaat
      301 gagtttactc tgtgctactg cccatcaggc acatttttca tccttcatcc ccactctttt
      361 actatagctg ggtttaagtc ctttcttctg tcctttgttc cttcagctca gcgaagtaaa
      421 cagcaggatt gatcttacac tgcattttgg tattgttcca actgctcatc aatagacatg
      481 ggctgggaat gcactgactg gaaaagaagg gcaagattga aattcacttt ttgttctttg
      541 tgccttttag tgtgcagcgg aatgtcccta atctgaaagc tgctacactg actgcctatc
      601 aacatgcaaa ttaatcatca agtgacgagt cccatattca aaagtcttta aaggtata
//
LOCUS       KCPA01001240             651 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 136256tic ultra-conserved element locus
            uce-2572, sequence.
ACCESSION   KCPA01001240
VERSION     KCPA01001240.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 651)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 651)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="136256tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>651
                     /note="ultra-conserved element locus uce-2572"
BASE COUNT          183 a          119 c          156 g          193 t
ORIGIN      
        1 tttattacag agcaattgga atgagattgt tgacaatttc gatgatatga atttaaaaga
       61 atcccttcta agaggcattt atgcttatgg ttttgagaag ccttcagcta ttcagcagag
      121 agctattatt ccatgcatca aaggtatgct taatatcaag aattgtagaa ttatgttgaa
      181 ttaattttag tcttcactga acaagtgata tgatggtaca ccatctttcg ggactgacct
      241 gaaatggaga gaactcagta ctgatcactt aaggggaatt aagtaaaatt gacccatgtg
      301 ggagcagtaa acgtgtatcc tacttttttt agggtatgat gtgattgctc aagctcagtc
      361 aggtactggc aagacagcca catttgctat ttccatcctg cagcagttgg agattgatct
      421 caaggagtcc caggcactag tattggcccc taccagagaa ctggctcaac aggtattgat
      481 agtatagttt gtgttgcata ggtttcaggt ttcacaactg tgagacagca ttaccagatc
      541 cattcagaac cccaaactgg cttctgtccc acgtgttctt caggggtgca ggaggcagcc
      601 tgtgctgcgt gaagtggagg gagtcttcag cagggtgttc tgagtggaaa c
//
LOCUS       KCPA01001241             493 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 136359tic ultra-conserved element locus
            uce-6179, sequence.
ACCESSION   KCPA01001241
VERSION     KCPA01001241.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 493)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 493)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="136359tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>493
                     /note="ultra-conserved element locus uce-6179"
BASE COUNT          109 a          119 c          124 g          141 t
ORIGIN      
        1 atttgcacaa ttataagcca gaaggataaa gctccccacg ggctagacaa gcacagggtt
       61 cactgtatct cacactgcac taggacaagc cagggggaaa accaaaggtg ggagccaggg
      121 agcaggcggg ctgcgtggga aggatctaag cgaccccttt gtagctcttc agtgtcggtt
      181 ctatttatac gtttccttgc ttgtgatgcc ttgttttttg tacagtttta tgtacatgca
      241 ggtgtagctt ttctaaagga gaaatcctat ggcagagtcc cccactattt ttcagatggt
      301 gacgcctctt gctaaggttg tacctcaatg tgtgatgcat ttccctgtgc ggggaagcct
      361 ttttttcccc gggcgctgtg agcacctctt tctgttcgga gccgtgagca tgacaccgtc
      421 gtgatcccct cgtttgctga gctgtcgaga tgaccaactc cattgtaatt agcccttcct
      481 aaagctttac aat
//
LOCUS       KCPA01001242             476 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 136471tic ultra-conserved element locus
            uce-4696, sequence.
ACCESSION   KCPA01001242
VERSION     KCPA01001242.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 476)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 476)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="136471tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>476
                     /note="ultra-conserved element locus uce-4696"
BASE COUNT          164 a           77 c          107 g          128 t
ORIGIN      
        1 gatcctaacc aaactggcaa gcatgaattt ctgttagagt attcagtcag gattatgcta
       61 aatgatgggc tgtccagact tatcttcaaa ctagcacact taactgctgc cttagcatca
      121 ggacacagat ggatgggaaa gatgaccctg acctccataa gatccacatt cctgtgcaag
      181 gatagaagca tgataatcag gaaatgatgg ttattagtta aagaaaatgc attattgtga
      241 aaaccaggag aaaagtgctt atgagaggaa gtgattggat tatgggggaa tgagagaata
      301 agactaggtc atttctccag agtaaattgc tgtgatttat aagagaaagg gggtagtgat
      361 atcatggctt catattgacc acattaattt cacaaacaaa cctaaatcag aatgcagcag
      421 ttaaatcaca cacagttttg agacatgaga catgtcagat acctttgatt ttgtgg
//
LOCUS       KCPA01001243             739 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 136583tic ultra-conserved element locus
            uce-1741, sequence.
ACCESSION   KCPA01001243
VERSION     KCPA01001243.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 739)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 739)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..739
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="136583tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>739
                     /note="ultra-conserved element locus uce-1741"
BASE COUNT          199 a          148 c          188 g          204 t
ORIGIN      
        1 ttttatttca gcagatagcc cccaaaaaag gcagggatgt caaaggcttc gagtcccccc
       61 tttgacattc aagcagtgct gagagtcagc cggggtctca gctctgacaa atttgcatct
      121 ctttgaatgt gacgcttgaa aaaagccgga gctgctagat taaatttttt tttttttcca
      181 tcgagaaaat gagaaaagcc tctatctctc cgccgagtct actgggaaga tctttattct
      241 gattcttgtt agaattgttt atcaccctga cagaccagac tcggacgaga taaaggcgct
      301 gctccatcac ggggcctgac agtggtagga catgcagaga aatgaaagga gcaggggaaa
      361 atattattaa tagatgccga cttgatttgc ctctatggca cgtcaaggaa ggaagggagg
      421 ggggagccac ggcttgattg caagcctatg aagttctgtc caaaaaagaa gctatttttc
      481 attaagtgat agaagggctt ttttcatgtt ctttcctgag gagctgataa cttatgcagt
      541 ttattctaac cctgctgatt tctgtcaggg aaagaaaact cctgaaagat ggctccagct
      601 cgtccttttc agagaaggag gctgtcttgt caaaaatggt agcaaggcat taaagccccg
      661 gccttgactc ctgcaaggtc ccttagatgt gattggtgtg tctgtgagca ttggggaagg
      721 agggtgttat tatggaccc
//
LOCUS       KCPA01001244             657 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 136692tic ultra-conserved element locus
            uce-4557, sequence.
ACCESSION   KCPA01001244
VERSION     KCPA01001244.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 657)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 657)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..657
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="136692tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>657
                     /note="ultra-conserved element locus uce-4557"
BASE COUNT          236 a          122 c          109 g          190 t
ORIGIN      
        1 agactgtaca ataattagca ttgtcaatta ctaattatag catgaccaca gatttacaaa
       61 aatgcagcaa agtaacagct ttgataattt caaagaataa caccttctgt cgcatttgaa
      121 tatttctact tttatgtatt ataaatgcag aaaagcaaga acaatagata acattttcta
      181 agccaaactt aaggacacac tgttcagact tcttattgct caaagaacat gtccccctca
      241 ttttgtctaa atataaacaa attaacttct tatgcatgtt gcttctgaga gaattttttt
      301 agagtggttt tccatcacta caaacctttt cctttccctt atgcaccagc aaacatactg
      361 atacaattta aaggtcatgt tcttttcaaa ctgacagggc cctccaaaat tttgacgaga
      421 gtccctccaa gaatcacacc atacaaacgg aaaggaatta agtaaagcat cacttgatgt
      481 aggctcaatc atgtgaactg attagaaaat gtaaccatgg agagaggtga ttcaaagtgt
      541 gacggacaac ctttcaaaga aaggagatgt catgttgata ataataagca agtacctgac
      601 attgaaggag ggggtgaaca cagagggtca ataaagatat aattgccttc agctact
//
LOCUS       KCPA01001245             766 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 136801tic ultra-conserved element locus
            uce-7628, sequence.
ACCESSION   KCPA01001245
VERSION     KCPA01001245.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 766)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 766)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..766
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="136801tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>766
                     /note="ultra-conserved element locus uce-7628"
BASE COUNT          246 a          159 c          149 g          212 t
ORIGIN      
        1 tgtaaagggc tggcttctgg caaaggttta tataattgta cttaatacaa agttcagtca
       61 caacatcaaa aggaaaatta tttttccttt catgaggtcc gggatttact gtttgttcac
      121 tcatttttgg caacagcccg tatgtacaat tctatgccac aaaccaaatc aggagatgct
      181 gaaggaagtg aaccataaaa gcaggatagt atctttttgc aaacaatcca tttgtcactt
      241 tcatggacct gggttaatta atattctata aaggtcttcc aaaagctgaa tacctctcaa
      301 gttctgaatt catggggctg accttagact ttctcagaat gatttttaat gcagtctgtt
      361 atcagcaaaa cccgtttaaa cacatgcccc atctgccagt accccatttg caaaagagct
      421 tcttatactt gcagacagta aagcttctgc ctgcttccct ctctcctcta aataccagct
      481 gtatggtaat gagcacaaac agctgaaaaa tactgcacag taacaaagct ggtacgaagc
      541 gggcagaaca acgcacccac tcaatgaggc agttgtagca tgaatttagc agattagcta
      601 ttgaacaggg gttgggggag gtttggaaag ggtctacaca gatagcaaga aaatgaaaag
      661 agaccaaagg ggcaggctac caaagaaaag cccaaattct aaagtacttt tgttgaactg
      721 catgaaccaa ttcttcaaat tttctaaggc ttactcatcc tgtact
//
LOCUS       KCPA01001246             720 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 136911tic ultra-conserved element locus
            uce-5937, sequence.
ACCESSION   KCPA01001246
VERSION     KCPA01001246.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 720)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 720)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..720
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="136911tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>720
                     /note="ultra-conserved element locus uce-5937"
BASE COUNT          233 a          122 c          130 g          235 t
ORIGIN      
        1 taaaagctat caagcataaa accatgatgt tacaccagat accaattact gtggtttctt
       61 aatatgcttt ttttgtttca catttattaa atacttagaa gttcaactgt agatattttt
      121 aatcagaatc agaattttct tgcaaaatgg gtgattacat catttgcaca tctatattgt
      181 aagacatttt aacgatataa gcattttttc atttagacag caaccataat aaattgaaat
      241 aaaattcagc cttgattgat gttctatgtg tcatgtgcag ggcaagtccc atctataaaa
      301 tgtggtttgc caaggcagca atattagtag catttgaatg tttttcttat taaggagaaa
      361 aatggtcagc aacatcaata ccgtctgctc caaagaccat ggtaaatgga aactgcctgc
      421 agcacatttg aattcctcat tgtatttggg atgaaggtac gatgcaggca gtgggaatcc
      481 ttgaaaatta ggatagacta ttacagttct taggatgaaa gagagaggct gattacaaca
      541 taatggagtg taccatattc atctctttga aatatgacct cactcggcct tttccatttt
      601 acaatcgatt ctctcattcc cttaatgaac ctgtgcgttc atgagtcttc cttggaagta
      661 tgcacatgaa gtattacagt agcagagagt aattgtctga caagcaactg caagtaaagt
//
LOCUS       KCPA01001247             590 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 137019tic ultra-conserved element locus
            uce-2908, sequence.
ACCESSION   KCPA01001247
VERSION     KCPA01001247.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 590)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 590)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..590
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="137019tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>590
                     /note="ultra-conserved element locus uce-2908"
BASE COUNT          183 a           92 c          104 g          211 t
ORIGIN      
        1 tttaggacaa aggttgattt gataatcata attgcatttc tactgtatct attttcttaa
       61 gtgttagtag atttattaga ctttccctgt atcacctatg gctgatttgc agcttccttg
      121 gtaatttctt agtaggcagt agcaatttct tatatcttca gtaatgtctt gaatgtacat
      181 tttttatatt aatgatctca ccaggagaaa aagtgtactg tgaatgcatg atggccatat
      241 ggaaaagaca atgaagttta gtaattaaaa ctgaaaaggg agagaactat gcagtaatta
      301 gaacactgat taatcagctg ataattttat cttgattaat gctgctgatt ttcctcttct
      361 tattgaccta ggaaaggtag gtttagacca attaaatata aattattccc ttttttcaca
      421 ttccaggcag cttccagtgt tctaagtcat actacactta agatgcagca ctgaattgct
      481 cttactaaat tgggcagctc aacaaaaggt aaaataaggt ttatgttcca aacatgctga
      541 tgcttttatc taaggcagga tcggacagaa ttggttattt cactattatc
//
LOCUS       KCPA01001248             472 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 137127tic ultra-conserved element locus
            uce-7457, sequence.
ACCESSION   KCPA01001248
VERSION     KCPA01001248.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 472)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 472)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="137127tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>472
                     /note="ultra-conserved element locus uce-7457"
BASE COUNT          137 a           96 c           80 g          159 t
ORIGIN      
        1 ggctttcctc taatctgcaa taaggaattt tcaatgttaa aaatgttaat aaaatttatt
       61 caggtaagat gcgcttaata aaatagtgac ataattacag tttgtacata ataatacatc
      121 tgtagtatta taaccttggc tatgagttat gaaatcagtg tataggccaa ttagctacat
      181 aggaactaag acactataaa cactggtttt aaatgtccta attagttact tgctcattaa
      241 ttaactttct gattaattgt gtagcaatct aatttgcaga tgaggcactt aaacagtgat
      301 accttgtaac tctttaaaat tcgtaattaa aatacaggtc cgtcggtttc gacccctttc
      361 aaagtttgat ccccttgggt gatgctgcgg cgctgttccc tcgtccttca caaatgcagt
      421 gtggccccga gccctacctg ctcggtatct catccttcgt ctttcgcccc tc
//
LOCUS       KCPA01001249             547 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 137238tic ultra-conserved element locus
            uce-3922, sequence.
ACCESSION   KCPA01001249
VERSION     KCPA01001249.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 547)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 547)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="137238tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>547
                     /note="ultra-conserved element locus uce-3922"
BASE COUNT          170 a           93 c          106 g          178 t
ORIGIN      
        1 tttattgttg attcacctat actttctgaa atttaagaag tcctgcctct aagattttca
       61 ttttggaatt tgagatcata aattaagccc tcttaaagaa actaagaagt ttgctgttgt
      121 ttttaataag attttacggt aagtatggca acagcaagtc tgttagtccc agctttactg
      181 cacgtgtgta gtttgagacc cttgaaatat ctggttttag gacatcagca gggggctaat
      241 gaaaaggctt tgttgatttt aacgaattgc aagccactgt agccaaaata aatataatct
      301 gctttttgga ttagttgtca cacatgattt tacctactaa cagtgattaa agaaccctgg
      361 tggaccagag gcagagctac tctctggtga ctcttgctaa aatagcaata accagaagta
      421 aataaagtgt tagggtatta gttatcttta ataaacactg acactgcata taatgaggct
      481 tcaaaaacat tgagtacagc agtgctactc tctctagcac agagagcatt ggtcatttta
      541 gatgtcc
//
LOCUS       KCPA01001250             694 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 137351tic ultra-conserved element locus
            uce-5879, sequence.
ACCESSION   KCPA01001250
VERSION     KCPA01001250.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 694)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 694)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..694
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="137351tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>694
                     /note="ultra-conserved element locus uce-5879"
BASE COUNT          216 a          146 c          134 g          198 t
ORIGIN      
        1 aaacatttcc tgattttaac gagactaaat tcacgagaac cccttatgct ggcagcctaa
       61 aaggtgacaa taccaggtga caggtaaaat cagtcctagt gtccacaagt tgtgcactgg
      121 ctcacagcat taaacataac gttaccactg ccacaaaagc aaaatggagc cattttatta
      181 ccaagaatct tgctgcagac aggaagggga ggggtctggt tattgttgca gaccccctct
      241 ttctccaggt ctttaatccc agacttggct tgttgcgctt caaattgaaa tatcctgaac
      301 agatgtaaaa acacatgtga gccactgctc acaagctgtg caaagctttg tttcatctgc
      361 tgatgatgtg agcctaaagg agatcttttt aaaatttcat cactattcaa aaggataatt
      421 aatacgtacc cccaggcttt gattatgcta tacccagtgt gtactgctgg tacaaaaata
      481 atgaggctct catcaggccg aatgaatact tgcagcaaac attcagtttc cataagaaat
      541 ttaagattca gcggcggtac catgtaggtg gcttaatcta attttaattt gtaacacaat
      601 acaatagata agatcatttg tttgtaacca gcacaggcat tttgtttaca tgaaacccca
      661 gtcagcattc agcagatggt ctttttaaag gctt
//
LOCUS       KCPA01001251             767 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 137461tic ultra-conserved element locus
            uce-3097, sequence.
ACCESSION   KCPA01001251
VERSION     KCPA01001251.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 767)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 767)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..767
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="137461tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>767
                     /note="ultra-conserved element locus uce-3097"
BASE COUNT          246 a          147 c          151 g          223 t
ORIGIN      
        1 taagacaggc ttttacacgc ttccaaactc ttctccctga aaattaaccc cattgattct
       61 tcaaatgtta agggtctcgg gcaaaagtaa accaaaggct gaaataaaat aaccatcccc
      121 ttggaacgaa aacttatatt caggagggat taatttcata ttatgtatgc gatacacata
      181 tatatgaaat taaaatagag acacacatga cttgggcatc agaaggggac tgctactttc
      241 atacattcat aaatagctga tgaactctct actcatgaag aagctcttgt aggcagtttg
      301 gggatttgaa aatctcaggg acctcactgt ccagcttaca gatgaccttg tatatggcct
      361 tcttccagga aggatcaaca tctttgcctg cgataatggc attgaaaaac tcccgtaacg
      421 tgatctgagc cacttccagg aatctctctg gaacctgctg atacaaggag acaatggcat
      481 taatacagtt ttcaatttca agtctctggt tcttcaaagg aaactgagct aagttctttc
      541 tttcagaaag gggcttacat agcacctgca ttttctaaat gtagcagccc tctattctct
      601 tatgcaaagc tgatatatat agtactatag caataacttt tataacatgt gttagagatc
      661 tttgtaaagt ctactgacag aatgtaggta acaaaatgtt actgtctgag ttgggagagt
      721 aggggtagga tataattagc aggaggggaa acaagcacaa ttgtctt
//
LOCUS       KCPA01001252             710 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 137569tic ultra-conserved element locus
            uce-34, sequence.
ACCESSION   KCPA01001252
VERSION     KCPA01001252.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 710)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 710)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..710
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="137569tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>710
                     /note="ultra-conserved element locus uce-34"
BASE COUNT          213 a          128 c          151 g          218 t
ORIGIN      
        1 tgtattaact gaacaacatg cctgagaaag ctgaataaca taaaattcga ctggcagtac
       61 gttgaataat ccaacagtta agatggagac aataggaata cttgatggac cagacaggag
      121 ggagcagaaa ggattttagc atggttttct ttaacagcag gccataatag acccttgcat
      181 ttattcagtg ctgagagaat tactggtttg ataacgacca ggaatgttgt tattaaaaca
      241 gtatgtgcag ttcattttca acagttttga attagagtct gcactaatga aacggatacg
      301 gtttctttca caaagggcag atctgttagt taatatagct gcagcagtgc cttgtggacc
      361 atgcctttag ctctatttgt atttcacagc atgataagca aagagtgttg attttcaagg
      421 atcctgctga tgaaaggtaa tggcattatt acatctttat ctcaaaaaca gaactgcatg
      481 gtaaatgatt attttttctc cccagttgct gttgcacaaa ggctttcttg cctagaatcc
      541 ttatttcttt gaatgatttt agccttggaa atgatatgtt attatttaat gtctgctcag
      601 caagcctgag agcacctaat agcgaatgga ttggaagtga agtgcctcct gctcacagat
      661 atggatcggc tcagtcacac gctgtaccag ctgtcatctc agccatactg
//
LOCUS       KCPA01001253             583 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 137680tic ultra-conserved element locus
            uce-6850, sequence.
ACCESSION   KCPA01001253
VERSION     KCPA01001253.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 583)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 583)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..583
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="137680tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>583
                     /note="ultra-conserved element locus uce-6850"
BASE COUNT          154 a          125 c           79 g          225 t
ORIGIN      
        1 cagccccttt gtcagccatt ttgcctttgt ctttgtcaac ttggggatgc taattcgatt
       61 ttccattgag aggtgcggat atctatatta ttttcctaaa actccagaga atattataaa
      121 tttcttttta ttgcttccag ccatgttatt taaagtaatt aaccttaatt tataaatttt
      181 tatatcaaac tgccttttaa cttttagaac tggcaggaga agtccatttc ccagggctcc
      241 taatagttct ccatttaatc aaaattcatc catcagattc cagtgttaaa tcatctttta
      301 attgggagtt acattctggt taatagtttt ataattcgcc gcctctaata gtttttacca
      361 cagggatcta ctccattttt tctcactcta ttattcctgg tgttcagcag ggacatttta
      421 aaaacgttca cttcccctgc ctgttctttg tgatctcatt aattcttgat agcaagttcc
      481 ctttctcctc attactggag cataactacc tttatcacta ggtgaaacct tactcatttc
      541 tgcaagtgct ctccaaaaca atctgcaatt tatttcagaa aat
//
LOCUS       KCPA01001254             862 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 137791tic ultra-conserved element locus
            uce-1172, sequence.
ACCESSION   KCPA01001254
VERSION     KCPA01001254.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 862)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 862)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..862
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="137791tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>862
                     /note="ultra-conserved element locus uce-1172"
BASE COUNT          301 a          154 c          163 g          244 t
ORIGIN      
        1 atcatactaa tttttaatag aagggtttag aaaacttctg tggctgcctg taatattccc
       61 attgatacat attttccata tagaaaactg actctgggaa tccagctccc tttaaagcac
      121 tcctaaggat attaacagat aaagaaaaga gatttcagtg caaaacccac ataaaaaccg
      181 atattaggaa tgataccaaa cttaaagaat gttgtaaaat gagcatggaa aaatgtacaa
      241 aatgaattca tgcccattta catgctttca gtcaggctac cagataacaa agcctctgtc
      301 tttgtgttaa cactgcagat taggtcaagt ttttacccct ctgagctctt ttcctgtaaa
      361 tgacgggttt tgatgtgaaa caagcaacat gtcaaagcaa gttgaaagat gtaggcattt
      421 tatgccatgt cacaatgaca ggccggtgaa tatttgggcc attaggggct tattagtgaa
      481 taaatgacca gatggttcag tgatgcacag agatggacag aactggatgc tactaatcag
      541 cactgtctgt acttgatgtc aaatcacatg acacagtaac ccatggatac cgaataaaag
      601 ttaccattag caagtcaatt tgatatctgt gtggtgtaaa cagacttata actgcacttc
      661 agagctgcct gttgttaaga agaaataatg gtagggtatt taaataaaca tactctatct
      721 tatcaagtta tgataaatat aaatagaatt tcaattccca ggacctcctt ttgaagaaac
      781 atttacatgt tagcctatct ccacagacaa aaaggctggg ctggaaatgc tgtaaaagag
      841 aagcaagagg cacattcttc aa
//
LOCUS       KCPA01001255             744 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 137904tic ultra-conserved element locus
            uce-6367, sequence.
ACCESSION   KCPA01001255
VERSION     KCPA01001255.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 744)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 744)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..744
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="137904tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>744
                     /note="ultra-conserved element locus uce-6367"
BASE COUNT          238 a          135 c          143 g          228 t
ORIGIN      
        1 atggagctgg ggttagaagg gcagaatggg actgcttatt ttattcagct gaaccatgca
       61 aattggcttc caactgaact gttgctgtta gctgaataac tgagtaatct ttgctgttta
      121 gagataaata ataatacatg ttactgaatt ccactgacaa ataaataatt tatatataaa
      181 caccttgaga agtaaagctc cctttggtcg ataacaggac agttttgtaa accacttaaa
      241 gctgcgataa aatcctactt gactggtcca cgagcagatg tgacaagttg aatttatttc
      301 ctctcttacc aggaagcttt gcaggaaact cttaacatat ggtgcttttc acttccatct
      361 agagctataa atgttattgg aaaaggatgt tcccaggagc agcaagtttc tgacgtttct
      421 gccaaatgga ctccaaatga tccttctgtg actcagaatt ccccaagttc ttaggagctg
      481 gcagccaaga atctctgatc taaacacaat tcactaattt aattatttta ttatagatct
      541 atggaaagct cttgcagacc ggtgactttg catctgtatt ggatctagct agacaggaag
      601 tgcaagttag aagactataa atattttgtt tcttaactgc attttgcttg aaaacttgga
      661 aaccatttca cacataaatc agtcacgcaa gcatgaatac agaggaatgg gaaataggca
      721 taaaagtaac atcagcttgt attt
//
LOCUS       KCPA01001256             715 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 138015tic ultra-conserved element locus
            uce-1794, sequence.
ACCESSION   KCPA01001256
VERSION     KCPA01001256.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 715)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 715)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..715
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="138015tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>715
                     /note="ultra-conserved element locus uce-1794"
BASE COUNT          221 a          134 c          150 g          210 t
ORIGIN      
        1 ataaagcaaa cggatattgg aaggagttgg ccatctgcct ttattttctt ttacttttgt
       61 taaggaaaga aaaaaaataa accccaccac agcctctgaa aagagaaaga gcatagccat
      121 gaaactgata gtgacaaaaa acaccctttt ttatcaggtc aaaatctcat ctaaatgcag
      181 ttctgatgaa tggtaaaaag cttgctttgt ggatttggag tgggtctcaa gaccagcaat
      241 gaagtctaat gattatttaa tggtgccgca cttgaagcag gattatgtga gactctcttc
      301 cccgttaaga gtttgatgaa taggttttgt gacagccatt taggaataaa caagaattca
      361 tcagtctgca taagaagaag ccagtttata gattaagttt cttgaggtaa ttcatgaggt
      421 cagtcccatt tagatgtaga ctattagggc tcagcttttg agagcggcca tacaagggag
      481 ttactccaaa tggacctctc taatacaaag ccccctttca gagggaagcc tgaaattttt
      541 atgaccctgc tgctaggaag cacatcaact tgtcactgtg aagatctgct ggggcaagac
      601 ctcatcactc tattaaagag ctctgtgacc ctattgattt gaagtattta aagcaggggt
      661 gaagttcaaa gcaatttctt ttctatacta ttactcagcc tctctgtgtc ttggc
//
LOCUS       KCPA01001257             673 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 138127tic ultra-conserved element locus
            uce-7390, sequence.
ACCESSION   KCPA01001257
VERSION     KCPA01001257.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 673)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 673)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..673
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="138127tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>673
                     /note="ultra-conserved element locus uce-7390"
BASE COUNT          218 a          129 c          116 g          210 t
ORIGIN      
        1 gctcccactc acattcatat ctgtagctga aggaaagcat ctactagaag gccgctgttt
       61 tatagttgcc actctggagt ccacacttgc attgtctgca attcttgatg gcttggaaac
      121 tggcactatt tcatccacct tatctgtaat ataaaagcat ccagtaaaat aaatatcact
      181 tgtccaaaga aacagaaaag ttaagtattg caaggtcaaa ggaagagatt tacttttcaa
      241 aaaaatgcaa agaaaaattt ttttggcatt ttaacaaggc aacgcttgag catcataagt
      301 cgtgcaagcc gagcactttt tattgctgct acataacatg catgctttag ttttaagcct
      361 gcatgcattt aatgtttact tagtgtgact cgaaaaacaa tcctcttctt caaaccttca
      421 aaatgtgaag ggagaatatc tatatagaaa tggaaagaag acctttagaa atagtgaatc
      481 tgtacagcac tgtttcaaat agagataagc agactgtact tagtcatcag aatttcagtg
      541 atattttgga caacaacaag tactccagaa gtgctctttc atgcctattc tcctagtaat
      601 cacatcctga tttgtcacac tcttggactt gtaggctagc ctgcattctt tgtttaaatg
      661 aaacttttat atg
//
LOCUS       KCPA01001258             711 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 138239tic ultra-conserved element locus
            uce-4202, sequence.
ACCESSION   KCPA01001258
VERSION     KCPA01001258.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 711)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 711)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..711
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="138239tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>711
                     /note="ultra-conserved element locus uce-4202"
BASE COUNT          191 a          139 c          140 g          241 t
ORIGIN      
        1 tatctgaaaa ccttttaaag cagagattaa attgtttagc tcaatattta atctgttact
       61 tcctctttaa agatgcccag tggaatttgt catacactga gctgataaca cgtaatattg
      121 atcagtcata aacataaaac agagaaatct caggaagtct tctgcaatcc ttttcttttt
      181 aattaaattt tgatctgaac tgcttttgat taattttctt atttgtaagt atgtgaattc
      241 tgggggccag caagtttctt aagttgcctg gcattggtct ctggtgagtg gcttagctca
      301 ggaacagtat gattgcattt ttatggtttt cagatattta atagcttctt cctgtcattt
      361 tctgaatgag tgaataaggt ttagccctct gggagccagc gcagcatcag agagtggaga
      421 aaatgactcg aatctgtgta cttgactgat tgccttagtc ttaattgttc tcttaattag
      481 ctgcagtagc aactgcatct ggggagagat catggtattg gtaaacagcc ccaccttgga
      541 gccctgtgta atgccttttg gaaacatgac aatgagctct gcatctctgc tacacaaacc
      601 tgccaaatct tctgcccctg cagtcttatg tgatctgtca ctctcgtctg tgagatgcag
      661 gcccccaact gtttgttctt aaacaaatta agctttaata tgccaaaagc c
//
LOCUS       KCPA01001259             661 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 138344tic ultra-conserved element locus
            uce-3161, sequence.
ACCESSION   KCPA01001259
VERSION     KCPA01001259.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 661)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 661)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..661
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="138344tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>661
                     /note="ultra-conserved element locus uce-3161"
BASE COUNT          228 a          104 c          116 g          213 t
ORIGIN      
        1 tatttcataa attaaacatt atctgaataa atacaagtca gtacagaagc atttgtgtct
       61 catatctttt ccttgattta aatgggttca tccaatatca gctaggtagt gaactttgaa
      121 gcagagtcca ctgtaataat agtaaagttt aatgatgcat agctttgtga gactgacaaa
      181 ttcccagcca aagtattgat tcctggagaa tttatgaagc acaggctcta ttctatgtca
      241 ttacggtcca tttttggctg aaagaatcat gtaaaataga tttttaaatg agtggtaata
      301 gccagacata aagaaggtat tgatgtgtgt catgaagggt gaaatagcat gccaggtaaa
      361 ggcatataac aaattgcaaa caacagggct gaaactcctg caaatgtaaa tttgctttta
      421 gttttaatca aacctttgtt tcagtaagta caaattttgc catggaactg caccctttta
      481 aaaaacataa ttatttacag ttcgatttca tgcttcacat tggaatgtgt ctataaaatg
      541 catatctcgc ttacagacct gttaatcaat atgagttgtg tactacatta caacaaaact
      601 acatctgaga ttattagggg aaaaatcaaa tgcacatagt tctgcttact tgagcaatat
      661 g
//
LOCUS       KCPA01001260             599 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 138453tic ultra-conserved element locus
            uce-823, sequence.
ACCESSION   KCPA01001260
VERSION     KCPA01001260.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 599)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 599)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..599
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="138453tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>599
                     /note="ultra-conserved element locus uce-823"
BASE COUNT          169 a          117 c          124 g          189 t
ORIGIN      
        1 ttacatgcct gattattttc atcctttgga gttgaaatga tttctagtgt tggctacacg
       61 agagcaagct tagtgctgtg ttttaaggaa gggtgctcaa tcccctaaaa taatgttatt
      121 ctaagggaga ggaagaaggt ggctgttcaa cgatttaaac aagtgccctg tgctcatttt
      181 ggaaaaagac aggggctccc tgcacccatt tctgctccaa tttaatgaag ttgttaaagt
      241 agcaagactg acaggttaat tatcctttat aaaaggggga caaattgaac tgtgtctttc
      301 catcattttt tgatatatca agaagctcct gaggtgctca ggtgccactc tggtgaatag
      361 aacaactaat ccactctgct attctttgct gaccctggtc cccccatcgg ggccttgcag
      421 tatattgcag ttgctttttg tttcacattc aacagattcc actttattat aaattcagaa
      481 ggattttttt cctccatatg ttggctgaca gctcccctga aataactgat ggctaaattt
      541 aaactctgat gaaaattaac ccgagtgtta aatgcaaaca ggagctgctt ggaaagaaa
//
LOCUS       KCPA01001261             573 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 138565tic ultra-conserved element locus
            uce-5140, sequence.
ACCESSION   KCPA01001261
VERSION     KCPA01001261.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 573)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 573)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="138565tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>573
                     /note="ultra-conserved element locus uce-5140"
BASE COUNT          170 a          102 c          128 g          173 t
ORIGIN      
        1 gtgtctatgt ttccaggtgg gtgatactgc ccacacgacc atgtccatac atccctctgc
       61 ctgtgatgca attttgcagc agcaggatta gagttgtgca gcaaggatat tgttggaata
      121 acttggcaat gctctaggtg ttctgacact ggttctttgc tcaagggcaa gggggattct
      181 ggatacaaac cagtgagaga aataatgtca gaagggttca ggagatgaaa gcaatgacag
      241 taaataagtc tgaaattatt ttaggtttac atactttaag tcctcagtga ctgaaaacac
      301 agccaagaat tgcttcagca atattccttc ataaatctgc ataataatct ctcagagggg
      361 ctttggtgaa attacaagta ttcatttact aaattgggtt cagtgtctgt atcatacgct
      421 gtatgaatat tcagtgccat gaattcatcc aaactatatt gaagttagtg tgttcgctct
      481 ccaatagaca gtaagcatgg acagaaaggg ctttccttga gatattccac tataagttat
      541 gttcctgaga atggcaatga ggaatttctg atc
//
LOCUS       KCPA01001262             523 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 138675tic ultra-conserved element locus
            uce-5051, sequence.
ACCESSION   KCPA01001262
VERSION     KCPA01001262.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 523)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 523)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="138675tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>523
                     /note="ultra-conserved element locus uce-5051"
BASE COUNT          155 a           92 c           89 g          187 t
ORIGIN      
        1 aaccagttct ctgtcattct caatataaga agattggggc ataataaatt atttttaata
       61 gttcttggct atgttgcacc agcacccaaa gttaaatcta tggaaatgtg gcgaggtgtt
      121 tctccaaagg attagcttta aatgtgtccc atgcatgcct cacttttgtt ctttaaaatt
      181 ttccattaag atgcaaatgt aatacctttt tgcctggagg aactaggttt tgatttgctt
      241 tgacaaggtg ggaaagtgct ttctttatgt tcttttcttt catgctttgc agcacagcag
      301 atggaagaaa agtctctaat ccccattctt ttctgcaata aaagtattta atttcacatt
      361 cctgtgatga ttattatcta aagactggtg actacgatgc caagtgagtg attacctgaa
      421 aacagaagga gagttgatca agtccagagc tttgcaatat ttcttaaatt taaacaattt
      481 atttctttta aaatgataaa taatatccct tctacccctt cca
//
LOCUS       KCPA01001263             579 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 138783tic ultra-conserved element locus
            uce-2541, sequence.
ACCESSION   KCPA01001263
VERSION     KCPA01001263.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 579)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 579)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="138783tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>579
                     /note="ultra-conserved element locus uce-2541"
BASE COUNT          110 a          132 c          161 g          176 t
ORIGIN      
        1 gatgaccagc agcctccaga gaatgtgagt gtctctctca aatcatttgc cacctccctc
       61 ttcttcggtt ttctggccca tctgaccgga gctggaagtg gtggtgctgg tgtaagagct
      121 gagtggtgta ggtgctgtat gaagtgttct gctggaaggt gcaatggtgc cctgggtgtg
      181 cccagagctg ctgggctgga tgaggctttt tctctctgtc cttctctgag ctgtttcttt
      241 ccccttttct ttcgcctcct gtagattcag aacattctga aggtgctggt gtcagacctt
      301 aaccgctcca atggggtagc cataccctca ttggacaaga ggaaggtgag gcagtgcttg
      361 tgtccctcgc actcgctctc cctcctgcat gctttgggtt ctgttcacac cgagctctct
      421 gggatggagc cttgttgtca gttgcttcag tttcatggag ctcaccattg cttgccttct
      481 ggtttatgtc aaaaaagtga gtcttgttaa aaagttcttt agatagctga gcttggggga
      541 aaacaggaat ttggggtgag gaataacagc tgaggaaaa
//
LOCUS       KCPA01001264             643 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 138893tic ultra-conserved element locus
            uce-1751, sequence.
ACCESSION   KCPA01001264
VERSION     KCPA01001264.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 643)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 643)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..643
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="138893tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>643
                     /note="ultra-conserved element locus uce-1751"
BASE COUNT          220 a          105 c          105 g          213 t
ORIGIN      
        1 ctttgtgcta gtttgacaag aactaatgtg gatacttaaa tattttaaag gctgcacatt
       61 tcagaatgat aaaatactta actgatcttc ctttcctgtt gaatttgtgg ctaatgataa
      121 aataattttg tctataaaag atttttaaca acaaacacta aaagttcttt tgagatcttc
      181 atatagggct atgcaatgac actttttaac tacagttgtt ttttattcag ccataaaatc
      241 tatctttcat atagaaaccc acttacatgt cttacttcag tgaaggttat ttgtagactg
      301 aaggtctttt cttgtcaaga tatgatgaat accatgtgtg aagacagaag agcatcagga
      361 cctgtattag ccggaaaacc cactgatctg tgaataacct aaaaaagaaa acctgaagat
      421 tagcaacgtc gcttttaaga atgatccatc aaattcaaca agcagattca cagagatgaa
      481 tcatctagtt ccttttattc caacaataca gtaaaggtta tttcccttcc ttacaaatag
      541 aagttctgaa atataagaaa tagagacttg tgagtccttt ttcagtcata aggcaacaaa
      601 tctattcagt gtgggtttta aacttaattg aagtaggtgt ggc
//
LOCUS       KCPA01001265             719 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 139003tic ultra-conserved element locus
            uce-2521, sequence.
ACCESSION   KCPA01001265
VERSION     KCPA01001265.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 719)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 719)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..719
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="139003tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>719
                     /note="ultra-conserved element locus uce-2521"
BASE COUNT          239 a          120 c          109 g          251 t
ORIGIN      
        1 acagatgaaa taaataatat taaaggcatt tgctttattt tatattgatt tctgactgta
       61 tcaatgtcct ctctattgtc acacttgtct atctggttcc atgtaaactg actatattgt
      121 atgaaagtta atataaaatc ttctcttgga tgataacaaa cacagtaatt tgcatttaaa
      181 tgacaatgca agcagtcatg aatacaacaa aacaacatta tttgcattta aatatagatt
      241 tataaatgac aggtatgctc tattgttcag taggaatttg ttattcttta catgttgttc
      301 ttttttcagt aatgtatttt tatggtaatt tttgtaacaa agtcattaaa ttgtgcaatt
      361 cttaccagat acagccagta gagtgttagc atcaactgga atggcccatt gtgctattcc
      421 tagaacaaac agttctctcc aagcatcttc caaaagcatc agctgtcata caatagatgt
      481 acaatataac atagtgtata atttatagat ttataaacaa tttaaatatg taaatttctg
      541 ttattttaaa aactacttta aatgcctgtc atggtatttc ccccacagca tcttctctta
      601 gccttttgag aaggtgtcta gaaataagtc tatgcattgt agactgtgca cctgtggacc
      661 aaaagggaag gagagtgaga actcttctcc cagagcattt gctcacaaca tgaacacac
//
LOCUS       KCPA01001266             400 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 139105tic ultra-conserved element locus
            uce-1798, sequence.
ACCESSION   KCPA01001266
VERSION     KCPA01001266.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 400)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 400)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="139105tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>400
                     /note="ultra-conserved element locus uce-1798"
BASE COUNT          139 a           67 c           97 g           97 t
ORIGIN      
        1 aaaatgcaat gaatcggaat gcctcacaga tcatagcgga atcagacttt ccagcaagga
       61 aaatcttttc atggtgaatt aagtggtgga ggaagaaaaa tggtgatgaa aaaaggtagg
      121 cacagatcac aaacactggg ctcagggctc gctgctgaag atttaagaac cttagctaaa
      181 gctatgcaga atagaatgtg gaaaattgaa tttactaaac aattaagcat tgaattaatc
      241 tacatcccgc acagtagaaa agtgggggag ggaaccgaac agagctgaat aaatcagggg
      301 agctcattaa aagatagtga atatatcagg tctgttgttg cataaaggag ggccgtttcc
      361 tggtataatt cttcagtccg gagcctcttc ttttctgcac
//
LOCUS       KCPA01001267             367 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 139213tic ultra-conserved element locus
            uce-2439, sequence.
ACCESSION   KCPA01001267
VERSION     KCPA01001267.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 367)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 367)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="139213tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>367
                     /note="ultra-conserved element locus uce-2439"
BASE COUNT          122 a           80 c           59 g          106 t
ORIGIN      
        1 cccacagagc ttctgttcca ccagagatcc agcaatgaaa ttgtactgca aatggaggaa
       61 ttatctcccc tctagttcaa ggtttaaagc ttcaatcaca ctataaaagc acccagtgat
      121 cacaaaacac caaaaaatac tgggttttga agcaataaaa ctttagagtg cagttgccct
      181 cccttaaatt tattcatgaa cctacattaa aatgtatggt tctttttaca cagcgtttat
      241 agcttaattc aaatgaatgt ttctggctaa gcacgagtgc ctctacacac tcaagtataa
      301 atcaaaactt caaatccatt agcagatggt ttctcaatag gctgtctgac ttggcttcag
      361 tagagaa
//
LOCUS       KCPA01001268             314 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 139320tic ultra-conserved element locus
            uce-4733, sequence.
ACCESSION   KCPA01001268
VERSION     KCPA01001268.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 314)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 314)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="139320tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>314
                     /note="ultra-conserved element locus uce-4733"
BASE COUNT           95 a           64 c           49 g          106 t
ORIGIN      
        1 gtcaagcact gcaaattctc tatgcttgcc catcaaccac aagcaccgtt ttagtaagct
       61 gccttttagt gaaatgtaac tgctactgtg tactatttta aaaatggctt gacagaattg
      121 ctaatgttct cattccttca ggatatttcc taatacttgt agccttttca tgtttctaat
      181 taggccagta atggtccctg aagttaaacc aattaaaatt atttactgtg acacatagtg
      241 tggagataat tatctgatat ctgaatccaa cttctgctta cttcgcaaca ttacttaata
      301 gaaaacaggg aacc
//
LOCUS       KCPA01001269             636 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 139429tic ultra-conserved element locus
            uce-7657, sequence.
ACCESSION   KCPA01001269
VERSION     KCPA01001269.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 636)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 636)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="139429tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>636
                     /note="ultra-conserved element locus uce-7657"
BASE COUNT          187 a          144 c          125 g          180 t
ORIGIN      
        1 aattacagtc tttaatgaga ccagagcctc tcaagttcat aatttttcat ttgtctatac
       61 gctttgctga gatgaggcac ctgcctctac aggagttatg cttccttccc ttcctcctcc
      121 ccctacacat accactgtaa atctgaaggg atatttcaat caccactttg ataaaggaga
      181 tcattttggc atataggtga tctcctaaca gattaaggat atttactttc ttcttgatgg
      241 atcattccca gagatcagca caacacaacc tacgcaatta gttttcacag gtggcagttt
      301 tgcctccagt aaaactgctt tctttctcct cctgcaagtc atagcagagc aaatgtatat
      361 aaaaacattt cagatatgaa ataaacactt tcataaaagc agctgtgatg caatgcatca
      421 tttctgtctg acctgagcta tggaatgaac ttttgttgcc agaatcaaag atggtaagga
      481 gagaatggag gacagaggcc agggggggaa gatcagggct cagaatagca cagtgtaaaa
      541 tgacctcaat cactcaaagg gtaaatgcct gtttggtgca agcacacatt ctctgtgtat
      601 tctgctgcac aacctgtgcc aacaggctca cgccgc
//
LOCUS       KCPA01001270             734 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 139540tic ultra-conserved element locus
            uce-166, sequence.
ACCESSION   KCPA01001270
VERSION     KCPA01001270.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 734)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 734)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..734
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="139540tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>734
                     /note="ultra-conserved element locus uce-166"
BASE COUNT          232 a          114 c          146 g          242 t
ORIGIN      
        1 aaatagaaac atgggtttag ctgcctgtct tgcagtagtg tgtggtgtct tttgtttctg
       61 gtctctagtt acgttagtac cctattgaca tagaaggtaa ctagattgtt ctattactga
      121 ttctgacaaa cagaaattgt ttgatatgct aaagctattt ctgacagaag atagaaagtt
      181 ttgacaaaca tgcatggcac agcaagtgtc caattctaaa gagcaaaata aatgcaaacc
      241 accattatgg ggaacacaaa cagcctgaaa gcaagttatc agtaagcaaa taattgttga
      301 actgttatga atggaatagg atgttgaaat agggcatgat tggctgatgt tacatatgtc
      361 cttgattacc ttccttgtgc ttttatccta ataagtgaca ttctttgtat tcccttggat
      421 ggctagacag tctgacactg aagaagaata aatattgcat gtggtacaca ttaagctgtc
      481 atctaggaca gcatttataa aaagtaacta gaaaaattca taagaaattc tgcagtgcta
      541 cagtttcctg gctccagtca taattgtcaa agttcttgac acattcaggt cttctgaaat
      601 gatttgggtt tacagctact tggtgtatga ataattatta aggattcatt ttttctgata
      661 atgcagactg ttaatgttct caaaaggatg cattttcatt gaagaccatg gagtgatata
      721 tagctagttc tctt
//
LOCUS       KCPA01001271             527 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 139645tic ultra-conserved element locus
            uce-4564, sequence.
ACCESSION   KCPA01001271
VERSION     KCPA01001271.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 527)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 527)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="139645tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>527
                     /note="ultra-conserved element locus uce-4564"
BASE COUNT          178 a           72 c           89 g          188 t
ORIGIN      
        1 taattaggat gctaatatgt ttgaccatta tttttttagt atgacttttt tctgttacta
       61 ttgtaacaga aatgatcctt tcaaagacaa ctaaggtgct aacgatagct aagaaggtca
      121 ttcctaggag gttaaactgg tttaattaga atttatgaga aggttactat aggagtacag
      181 aaagatgtta aggggttaac ctataagaga ttacattgta gtcagtgttc tgttaaagtt
      241 tgaattaatt tttcccatgg gtttttcaca ttctaatttt caactaaatg agacatctgt
      301 ttcagaaaag gaaaatttgc tatggttgtc atagcaacta tcattctgta agaaaattat
      361 tccaatggtt actttagaac agaaagatag aaattcagta cataaagcaa catccgattt
      421 ctagcactga taattcagcc ttttttgtgt agcagattat ttggcctgca aaacttattc
      481 aaatgtttta aacataagct gtaaacaaat tcacctctga tatattt
//
LOCUS       KCPA01001272             735 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 139756tic ultra-conserved element locus
            uce-370, sequence.
ACCESSION   KCPA01001272
VERSION     KCPA01001272.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 735)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 735)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..735
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="139756tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>735
                     /note="ultra-conserved element locus uce-370"
BASE COUNT          247 a          146 c          143 g          199 t
ORIGIN      
        1 agggcctcaa gcaaggctaa agttaggaag caaggatcag gctctcatgg cagaactagg
       61 gattactctt ggttcattta aacttaatta acctgcaatt atgattaact caggggaaag
      121 tctttccaaa ttaaatacaa aaaatgtatt attttctaag tctgtccaaa gttcttatta
      181 tgttaatatt aatattcata aagaagcact aagtggcctg aaacatctct aaccttgaca
      241 gtttttttca ggggtaataa taatccgcag caaatgcagg ccaaccaaaa accacttaac
      301 taattagtag ttgcagtcac cgagaaaaca tgaatcaaca ctgttattac aagtggcaca
      361 tttgagtggc atctaattat gacttgatga gcacgatact tgcattatca acattactac
      421 tgcatcccat cagggactaa aagccgctga tggcattgac tgcgagaaac tccccctcaa
      481 tggtacggca gcacccaaca atctccttgg caggggcacc ctcactaaat gacatgttaa
      541 gcataattac tggtagacat tgtaaataaa caggattgga agtgaaaatt gtaccaagtg
      601 cataagacac aatctgacac attggaagtg gcagccttaa ttgagagttt ctttgactgc
      661 tcaagatcat ttcaactgca tttctcggag gacagtgatt ataactgtgg agacagacgg
      721 cataatggta tcagc
//
LOCUS       KCPA01001273             449 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 139865tic ultra-conserved element locus
            uce-4119, sequence.
ACCESSION   KCPA01001273
VERSION     KCPA01001273.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 449)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 449)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="139865tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>449
                     /note="ultra-conserved element locus uce-4119"
BASE COUNT          127 a           84 c          109 g          129 t
ORIGIN      
        1 ctggtgagtt ctcgactcga aggaggaaaa aagatctgtc ctcctgtttt taacctgtgg
       61 acctcaagaa gttttagaaa acaaaagtgt cagagtcact gaagcagaat gccctgctcc
      121 tggaaaggga gtgatttaca tttagcatct gttttgggct gagagtggga attggctttg
      181 taatttcttc tgtcatgcca ctgtcagaaa attaagctgt ttacgccaga ctacagaagg
      241 ttaatggctg ttctagcaaa ggtcaagtgg tcattttaaa ggaaggctat gctgaataat
      301 cgaaaatggc aggaggataa ggcataaaat cttatctgac tgctcatcct accctgtctt
      361 tgctctgccc agaatgtgaa ttgcttctaa agataccttc gattccatga gcttcatggc
      421 aagggagtgt tctgggaacg aaattcagc
//
LOCUS       KCPA01001274             726 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 139975tic ultra-conserved element locus
            uce-5679, sequence.
ACCESSION   KCPA01001274
VERSION     KCPA01001274.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 726)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 726)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..726
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="139975tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>726
                     /note="ultra-conserved element locus uce-5679"
BASE COUNT          250 a          156 c          120 g          200 t
ORIGIN      
        1 cctgccatca acactgtcat catttggtgg catctgtctc tgcatttaca tctgccttaa
       61 aaaccagcca ttccactgct ctgtgctatg gctgactgca aagtctccta cacagtagga
      121 aatattaagc acatacctca aagacttgaa ttgcattgaa agtaacaagg cgaatattat
      181 gtagtgttta ttgcatttta aactctttaa agatatctaa ttctgggcag cactgcatcc
      241 ctacacacag ttgaaagaaa attccattct gttaacatca gatttttttc actagcttca
      301 aaatcaaaaa cacaacagta agcttaaaga ttacaggcaa cagcattcaa acatggatgt
      361 gggtagagaa aggagtacct ggcatgagta cctgcttagt ttgactgaat ccttgatttt
      421 taatttggct tttcatgggc cgctcacaac accaacgctg tgtgaggtat ggtagtcagc
      481 tgcaataatt cataaaccct acacttccat caatccaatg ctactggctc tcgagttaca
      541 gaacaaactg cattagaatg caaggcaata aagcactaga aacatccttg acaaagaaat
      601 actagcagtt tatatgaaag gagtccaaca tgtgcctcaa atattaagta aaagtttctg
      661 ctgatgtacc aacacaatat ggacttaaat acaaaaccag ttcaacaaca aaatccctaa
      721 aaataa
//
LOCUS       KCPA01001275             574 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 140085tic ultra-conserved element locus
            uce-4616, sequence.
ACCESSION   KCPA01001275
VERSION     KCPA01001275.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 574)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 574)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..574
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="140085tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>574
                     /note="ultra-conserved element locus uce-4616"
BASE COUNT          191 a          103 c          109 g          171 t
ORIGIN      
        1 atccttcatt tccaaggact tccgtgtctt atctttccag aagattgcta cagctagctc
       61 aattattact ttcctgggat gtcttgtttg cttccaccag acggaagtaa tacaaaatta
      121 tgtaaatcag ctttcttgaa gtaaagaatc atggaccagt caataatgtt tatgcattaa
      181 gaaagggcag ctcctcctgg aagaaataac acagggagcc gatcataagt aaacatttct
      241 aaacagacaa agggctggtc cctgcagcac aatatattat catatttcca cataattagt
      301 ttgttttcca cttgaaatca gaaaacgatt cgacattgca ttctgtgcct caggatggtg
      361 catacagtac aattctcatg tgcaggttca tatgttgaat aattagtaag aattaatctg
      421 ttgaaattaa agtttggaat attatagaac tcatgaatag tgcatggaac catcaagtaa
      481 attaaaccag gaacagaatt taggaagcta gacaatagca gatgactgct ggcaatctgt
      541 tttttaatca gtgcgttaca agccagaggg atga
//
LOCUS       KCPA01001276             465 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 140195tic ultra-conserved element locus
            uce-6824, sequence.
ACCESSION   KCPA01001276
VERSION     KCPA01001276.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 465)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 465)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="140195tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>465
                     /note="ultra-conserved element locus uce-6824"
BASE COUNT          155 a           82 c           98 g          130 t
ORIGIN      
        1 tgttagacat taaggctgat ctgtaccact acagcagtgc agaggaaaaa tgtaggagcc
       61 tcaggacctg aaaagtacac agaggcattt attaaaaaac agattgaaga attcaaccta
      121 ggaaagagac atttagccaa catgatggga gaagatccag aaacttttac ccaagaggat
      181 attgatgtaa gtacagttgc tctgttggag aagtaattta ctgtagagtt taagatactg
      241 aaagcacttt acttcagcat gagcccctca gctctctgtg aattttaatc aaactgtcag
      301 aataagcaag aatgctccta tacattgcaa ctgtgactgt gaatagacat tctgcttctg
      361 ctgccttgtg aggtcagaca tcccagtata gagctgtata ctataattaa agcatagtag
      421 gttcttttta aaagtgctaa tggataatcc ccttgatctg aggtt
//
LOCUS       KCPA01001277             559 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 140304tic ultra-conserved element locus
            uce-939, sequence.
ACCESSION   KCPA01001277
VERSION     KCPA01001277.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 559)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 559)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="140304tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>559
                     /note="ultra-conserved element locus uce-939"
BASE COUNT          173 a          126 c          120 g          140 t
ORIGIN      
        1 aagtctgaag agatttatgc taattaagtg gtttgcttgc agaatttcat gcaaaggcaa
       61 tgacaaaaca gtactatttt cctcgcctgc ttccacaaaa tatgttttat attctaagca
      121 gcactcacct agcagcttcc aggagttcgt ccttcttgta ttcacctaaa tgattgcaaa
      181 atatcatgct gttagcattt ggcagaagac agattaagaa atgcagtagg aagcaaatac
      241 agaattaaaa cagagaagag gagagcccac accccgctgg gtgatggagc tgtgacgtta
      301 gccagcttgt ggaggcagca tcaccagtac cttggagacg ggcagcaaat tgacgcatct
      361 tcttgtccaa tcctcagatg gaaaggcttt cttcggacaa ccaatgactg cgaaatcttg
      421 tgtccagaaa cacagtcccg ctgataacag catgtcagct gaagacaatg tccccacccc
      481 ctgccctatt cagtatgtca cattatactt gggaagcata ataaattcca agacaaagca
      541 aggcagtgcg gcttttgaa
//
LOCUS       KCPA01001278             645 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 140413tic ultra-conserved element locus
            uce-41, sequence.
ACCESSION   KCPA01001278
VERSION     KCPA01001278.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 645)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 645)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..645
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="140413tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>645
                     /note="ultra-conserved element locus uce-41"
BASE COUNT          221 a          128 c          100 g          196 t
ORIGIN      
        1 tccggcctat aaaattgctt tcaagtatgg caatcgttag gctacctaat ataagtgtaa
       61 atgatttaca ttacactaat gtgcactacc tctgctcctg tagcctgtct ccaccttgtt
      121 cacatttctc aaatgaaagt gcaaacccat tgttaactat caagagtttc tctctattaa
      181 ttaaaatatg ttttaataaa aggaaacagc acattttgat aacagccttc taaggctgaa
      241 aagtatttac attgttgcat tttagggctg ctgtgaaagc cgattttgtg ctattcaggg
      301 accacaataa taacgcttta aaattcctca ctgggatgca atgtagtcct tttgatggaa
      361 agactgtctt tctcattcgg cagaaataaa tccattcatt tgatcatgta gtcattgagg
      421 gcaatacaaa acaaaccaag tgtgagaaat tctatgtgat gaagtaaaca aaacaaaacc
      481 cccccaaaaa agggaaaaaa acatttccat gacaaaaaga ttctttgtcc ttaatctacc
      541 caccatatgc aagcgtttct ttttagcata tctcttgttc taatctcggg tgacatggct
      601 acatagataa gattcacaaa acaaaacaaa aacctagttt aacaa
//
LOCUS       KCPA01001279             534 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 140524tic ultra-conserved element locus
            uce-1205, sequence.
ACCESSION   KCPA01001279
VERSION     KCPA01001279.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 534)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 534)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="140524tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>534
                     /note="ultra-conserved element locus uce-1205"
BASE COUNT          131 a           99 c           96 g          208 t
ORIGIN      
        1 atttaaacta ttgctgttca gaaataagag ttgtccggtt accacgctta ggtttttggt
       61 ctctccaatt atttgctgct gacttttcag tgtttctcac ttaaacctga ctgctaaact
      121 gtgctctgtg tggtgcactt ttccttctcc ttttgctgct tgtgttccct cagttgttga
      181 ctgtgactgg aaaataggcg tacaaagcat tttgcattct ctgaatgtac cacacagtaa
      241 ttctgctgtc tgaaaactct gtaatgtcaa taattgatgc acttgagaag tggtaattaa
      301 attagttaat tatgctggta aaattacatg caattatgtg actgcagggt atgtttagta
      361 aattaggctt tcccatactc actacatatt gtggtgccaa ttttgttcct tgatgattag
      421 gtagcttttg atacttctta attgatttaa tacctggatc ttcattagcc ctcgattgct
      481 atgcaatgta tgtctgacat ttttctctct gatatttcac agaatatcat tcat
//
LOCUS       KCPA01001280             623 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 140635tic ultra-conserved element locus
            uce-345, sequence.
ACCESSION   KCPA01001280
VERSION     KCPA01001280.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 623)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 623)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..623
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="140635tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>623
                     /note="ultra-conserved element locus uce-345"
BASE COUNT          218 a          109 c          117 g          179 t
ORIGIN      
        1 gcatcatgtc cctttcattt cgccagcctg taagagagct gggttaggag gtagaaggga
       61 aacatcatgg caggaatatc ggtgtatttt ggatgcaaag cagaagctta tctgttttac
      121 tactgcagca ccagagaaaa tcaattttga cacagaactg ccactttaca agaaaataac
      181 tatactttcc aataacctaa tctgtgcaaa gcctactgaa aattccctaa agaaccagta
      241 gttaaaacct ccattaaatc aaagggttta atatgggaag ggaagagagg atgcagtttg
      301 acttgggaat gtaatggact cagtggggaa ataaatatgt tgttttatgt gtacagttac
      361 agaatttgag aacacagcat tcatttcaaa gggaattctc ttgctgtgca acttattcct
      421 aaacagatgt gatttttgct tattcaaaaa catttaggta acaattacag cataataaat
      481 tataattgcc atcatcttcc agctatgcta tgacttctat gcaaacacaa agcaaatgca
      541 attatataga acagtaaatc ctattttcag gtagcttaga gcactgacag aacacttgcc
      601 ttggaatgaa caatacttta aaa
//
LOCUS       KCPA01001281             418 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 140739tic ultra-conserved element locus
            uce-142, sequence.
ACCESSION   KCPA01001281
VERSION     KCPA01001281.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 418)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 418)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="140739tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>418
                     /note="ultra-conserved element locus uce-142"
BASE COUNT          115 a           78 c          100 g          125 t
ORIGIN      
        1 ccgcaaacga caaagaacga catgatgcaa tcttcaggaa agtaagaggg taagttcttt
       61 tcttactgtt ctctgtgtac ctaagaaacg ggctggagtg tgggccttga ggaggtgtgt
      121 ccaattcttg taagcaggtt agtgggtctg aagatctaaa attgcgcata agttgcgtca
      181 tagcatgctt atttgtatat ttcctcttta gcatactaaa taagcttact cctgaaaagt
      241 ttgacaagct atgccttgag ctcctcaatg tgggtgtaga atctaagctc atcctaaaag
      301 gggtcatact gctggtaagc tggttgcatt tttttgatgg gatacagaag ttttggatta
      361 tccccacccc tgcaaaaagc atctacaggt ttaatgcaag tctccaagga tcgagggt
//
LOCUS       KCPA01001282             826 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 140840tic ultra-conserved element locus
            uce-24, sequence.
ACCESSION   KCPA01001282
VERSION     KCPA01001282.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 826)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 826)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..826
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="140840tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>826
                     /note="ultra-conserved element locus uce-24"
BASE COUNT          281 a          149 c          147 g          249 t
ORIGIN      
        1 tatttgtgca tgtatgtgca tacattgtat aattaaattt tccattgact atgacaacca
       61 tagaagaata atgatagaaa attaatcaac atatcctgaa gtttattttt cctctgaaaa
      121 acatattaga aaggtcactg tgatctgaga aaagagctag gaagtccctg atagcacctg
      181 gttatatata aataattttt catccccctt tacccctgaa gcaagagaag acctgctttt
      241 ttatcttgtt aatagaaacc gcaatctctc attaatatgc agggctagtg tgctgcttct
      301 caagaggaaa acctgcagca aggctttgcc attaatcaac ttcagcccag cagttcagtg
      361 agacatgatg atacatgttt ttaactctaa attaatgaat atctttacca actgtcaata
      421 aatgaagaaa aacactggtg aggaacacaa gttgaggtgg gaaatttcca aacacaacag
      481 agtgatgggg aagtgggcaa ctaacaagaa taataatgct gtcacacaca aacaaggctt
      541 aacatgatcc aggccctact caaggaaagg gttgtgctgc aatgataaat ctgccaaaac
      601 ctaattattt ttgacacatt agatgcatca gggaatcact gtgaatcctt atcaagtagt
      661 ttttgcatta gaaagtgact gaacctgcca gccatctctt gggctacact cttcaatgaa
      721 agtagtaact ttgaatttta aaaggtacag attgctttaa tattcactgc aaaataactt
      781 attattcaaa ccttattggg aagactctca gttttgtttt gttttg
//
LOCUS       KCPA01001283             716 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 140952tic ultra-conserved element locus
            uce-1512, sequence.
ACCESSION   KCPA01001283
VERSION     KCPA01001283.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 716)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 716)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="140952tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>716
                     /note="ultra-conserved element locus uce-1512"
BASE COUNT          244 a          131 c          140 g          201 t
ORIGIN      
        1 tatgaacaga tcatgacaat ccagtcaata attaggagat tacaagtttc tgtgttttag
       61 tgcatctatt tcaatgttgc cagacccaga gctgcatgaa ggagagggac attcaatgat
      121 gtgtccgtga aggggaaaca gtgaaaaata ataacctatt agcagtccat aaagttcaat
      181 ataaaatatg tttgtgctaa agtgttaaac aagtagaaca aatagcgtgc tagtagcata
      241 caaaattaaa acgagtcaca aatggatatt ttctatggca atttatttca caattactct
      301 tgtggaagct ttcatgaatt aaatatgagt tctatcttga aattaggtgt tataaggcta
      361 aattacaaga ggcagccagt aattgaggtg gctgaaacac ggggtctagt gaactaatct
      421 cttgctgtgc cacgtggctg tcccctcgcc aatgggaaac ctccccatga caaaaacaga
      481 ggcagctgag aaaaattgat ttctcatctg agccatattt gatagctttt gaaatcgaaa
      541 attgaaatta actaacctaa gccccattgt aacaaaagag caaattaaat atgcaacatg
      601 gcttcctatt ggcagcaaga gggcctgcca aggtaaattt gtaaatagag tttaagatgc
      661 aatcctcccc cctcctcttt ttcctttctc tcagcgcaaa aagtataagt ctgcaa
//
LOCUS       KCPA01001284             645 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 141062tic ultra-conserved element locus
            uce-6479, sequence.
ACCESSION   KCPA01001284
VERSION     KCPA01001284.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 645)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 645)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..645
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="141062tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>645
                     /note="ultra-conserved element locus uce-6479"
BASE COUNT          177 a          125 c          141 g          202 t
ORIGIN      
        1 gtggtcagtg cagtcagtgg ccccgggcag acagtctttg agcacagctg gcactgccct
       61 tatcacaggg cagagcagcc tgccttcatg acattcagag gtctgcaagg catgcaatac
      121 cctaattctt cacaataaat ctatggtgat ccaaggtaaa gccctctttt gctgtggttg
      181 tgacattctc ctttgcagcc tgtccatacc tgcaaattct gcaaagcatt gttcgggggt
      241 taattaaagc agtctgtttc tacagcacgt tctgtctgtt tcttcttttc attattagat
      301 gtgatgacac atttgcctgt gtggcttccc gcagatggca cggaaatttt gtgatcaaat
      361 gttaagagta aaccaactgt cagatctgat cacagcttcc tgtattgctc tgctggtgta
      421 ggaataccat tttaataaag ggctccttca agtgataggg tttgcagcaa ggatgaagtc
      481 tgagagtaag atgtatagtt caatattaac agattcaggg ctctattgag aagttttatg
      541 tcccatttat ttacaaacat ttttaataca aagtgaacat tattagtgat tatggtttaa
      601 ttcacaggca attaaactga ataaaataca aaataatgtg ggtgg
//
LOCUS       KCPA01001285             298 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 141168tic ultra-conserved element locus
            uce-4050, sequence.
ACCESSION   KCPA01001285
VERSION     KCPA01001285.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 298)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 298)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="141168tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>298
                     /note="ultra-conserved element locus uce-4050"
BASE COUNT          103 a           62 c           47 g           86 t
ORIGIN      
        1 ttcttataaa tctgaatcta cacccagagg tcactggttg gctgaactta aaccgcttta
       61 cttagtaaat ttaattaaga aaatacagtg caactcataa gcaaatgaga aaccaaacca
      121 ccctctcgag tgctgattgc ctcgctcgac ccctggtgat acagaaacag gcaaaattaa
      181 aaaggacatt aaagcttcat taaatctgaa acacatttag tacagtgaca tatctgcagg
      241 ctatttcggg gaagattaca gactcttttt tcttaattta taataccttg acaatctt
//
LOCUS       KCPA01001286             688 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 141278tic ultra-conserved element locus
            uce-1985, sequence.
ACCESSION   KCPA01001286
VERSION     KCPA01001286.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 688)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 688)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..688
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="141278tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>688
                     /note="ultra-conserved element locus uce-1985"
BASE COUNT          198 a          135 c          138 g          217 t
ORIGIN      
        1 ggaagcagga ggagggcacg cagctgtcct ggatgtattt atattgttgg gctgagattt
       61 tttactgcag gcttccctct gtttgcaggt gaggtccttc ccccggcacg cgcgccccgg
      121 tgctacgcgg ggctctatta aagccgctgt tcaatagttt ggtgatattc agacaatatt
      181 gaaacattcc caaatgaact ttgcagggag acattttcat tcgctgcctc cctcctcatg
      241 catattaaca aatggtatgc aaggcctcat ttaattcact gattttacat tcggatcact
      301 ttctctttta cagctatttt taccgggctt cattaatctt tgttgaatac aatggcatac
      361 atctttaatg cggccgctgt caagtcatat ttcagtaaga gctgcaaact gaatgacagc
      421 aagcaatatt aataaattta acatagacta tatcaatttt taacagaatg aatgtggaaa
      481 gctaaatgta ttatttttcg tttaaatcat agggtttatc accggttaag tagcagcgat
      541 ttcaggaaac ttgtgacgtg ccgtacaaat agatttacat ctcattaata agtaaattag
      601 gcaaatgcct ttcaagttca gacaagtaca taagtgtaat ctccatatta aaggagtagt
      661 ctttgataaa ccactgagga attgcagc
//
LOCUS       KCPA01001287             725 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 141388tic ultra-conserved element locus
            uce-5969, sequence.
ACCESSION   KCPA01001287
VERSION     KCPA01001287.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 725)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 725)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..725
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="141388tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>725
                     /note="ultra-conserved element locus uce-5969"
BASE COUNT          226 a          118 c          119 g          262 t
ORIGIN      
        1 ctttaattat acttaccatt tggaccttgg tatatttgtg tgactgagaa ttatttaaaa
       61 atgtttcatt ttcataggtt tccactattt ttctatagat aaattagaaa agattgggaa
      121 attgcatact gaaaattgaa ataaggacta taaaatccat tttgagactt gccttttggt
      181 gtttacttca aagcatgctt ctgtgtgtgt gcttgattta catttagcaa tatctaagtg
      241 caaacagtaa tcatacacca aagtaaactg gactatatgc aattgcttcc tctgtttctt
      301 caattgcagt tgcaatccca tagattcaaa tcttgacagg tagcataatt agaaaattcc
      361 ctttgtctta ttaaatgtga ctcttctcaa tagaattcac ttcattgcag gcaaagaaca
      421 gaaaatatac ttcaaatcta aaatgggaaa tcaaggggga ctgttttatt tttatctgtc
      481 tttgtgcaag cgacattatt atcaaaggat attgtaatgc tgaaaatgta cttttgggat
      541 ttaaatcacg tattagcctg gaaagcaaaa agtgctgtag ggcccatgca atatattttc
      601 tcattaatct gattgaaaga ttatccttcc tatagctatg aaaagtctaa tacccatata
      661 tccatctttc ctgctagtaa aattcagctt tgtgcgtagt cattgtctct tgtgtctgag
      721 gtcct
//
LOCUS       KCPA01001288             443 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 141494tic ultra-conserved element locus
            uce-458, sequence.
ACCESSION   KCPA01001288
VERSION     KCPA01001288.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 443)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 443)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="141494tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>443
                     /note="ultra-conserved element locus uce-458"
BASE COUNT          116 a          108 c           97 g          122 t
ORIGIN      
        1 agaaatttct tgaacctaaa gacataatct ggtgatccaa ttctccccac tgtgtccatt
       61 cccgtgaaac tccatttact ttctcctatc cgtcaccagc tcccccgcat cccacctagc
      121 caatcctcta ggtttcccac attgtttccc cttttgtctt ttcagtccaa acagaagaac
      181 aacagacaag gtttcgaagg gcagggagca tcaggggctg gaagagaatg gctaagatga
      241 gggtcagagt cccagcccta ctgccaacag ttactagggt ttgtgctgcc tggctgggca
      301 gtgttcaaag actttgctgg gctttgttcc actgtgtagg gattaggcct ggcggtctga
      361 gaatttgcct tctaattaaa aaggataaaa gatagaagta gcattagact aaaacatagc
      421 agtgatactt cacaggcttt ttt
//
LOCUS       KCPA01001289             693 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 141604tic ultra-conserved element locus
            uce-4784, sequence.
ACCESSION   KCPA01001289
VERSION     KCPA01001289.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 693)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 693)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="141604tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>693
                     /note="ultra-conserved element locus uce-4784"
BASE COUNT          213 a          104 c          113 g          263 t
ORIGIN      
        1 taatttacag aagcaatttc ttttcaaatt aatagataca ttttgagttt aggaaattaa
       61 ctttacaata taatgaacga tttttcaaga gataagacaa cataatttaa aataggttca
      121 gattcagaaa tataattttg cttttgttgc ggttgaaaaa tgaaggtttc ttttatatgc
      181 tgtatattcc aggacgattt caaagcactt tcacttagaa aagctagctg ctattacata
      241 tgaattttca aagcttgcca aggctttgga aggaatgatg aaaattacta ttgcacgacc
      301 ttcaggtttt ctttgtttca taaaaggcta agatagcatt tttgtcattt ttctttcagc
      361 tcaggtcttt catcataaat atcaaagcat gcaattatgc ctgctcatat cctaccgtat
      421 tctgcctgtt ttctatccat agtgatggtg ttctctttaa ggataccttt ttcttttgtt
      481 tttcacaaat ctgaaagaag tcccatgttt ttgtcgagtg ccataaattg ttcatgaaat
      541 gcatgttgca ctgattaaga agaagagttg attcttttat tcttttgttc taaggaaaat
      601 cctaaagtaa tgtttaagtg tcaatcctaa gactgatttg gcctacaggt ggatttttta
      661 aatagtgctc attaaaatgg gacaatcttc tat
//
LOCUS       KCPA01001290             457 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 141716tic ultra-conserved element locus
            uce-7038, sequence.
ACCESSION   KCPA01001290
VERSION     KCPA01001290.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 457)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 457)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..457
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="141716tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>457
                     /note="ultra-conserved element locus uce-7038"
BASE COUNT          101 a          119 c          116 g          121 t
ORIGIN      
        1 caccgaccag agtttgacaa gtggcaggtg gctgggatgg caagccacag ccacagcaag
       61 atgggaaggg ggctggtgtt atttacctgg gactaaactc aggcaccgtt tgctaaaata
      121 gaagctgggc ttaaattgat tcctagtgtc tatatttcat gttgaaaatt ggcttgtaaa
      181 tccatgtttt gatctatgag ggccgtctcc ttaagaaaaa gcaagagtaa atgtgtaatt
      241 tctcccttga cagcacacgg cgcagaggcg atccttcttc ccgctcccct ccgtttcggg
      301 acagctccac tcgttccgat taccactctt tcttcctcgc cccacgcctt gatgtctcca
      361 tttcattacc gcccgcccat ttatcaagct gttaccgtaa gggtgacttt gcccacttgc
      421 gtgtggcagc ggggcctggc tgacacgggg agagggt
//
LOCUS       KCPA01001291             501 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 141820tic ultra-conserved element locus
            uce-4190, sequence.
ACCESSION   KCPA01001291
VERSION     KCPA01001291.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 501)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 501)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="141820tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>501
                     /note="ultra-conserved element locus uce-4190"
BASE COUNT          149 a          110 c           94 g          148 t
ORIGIN      
        1 ctcagaactc cttgcctgat aaatgatagg aaagtttgac agatcagaac gatacgaagc
       61 agcctaaaac atttggcaca atgtgtgtct ggcatacaga gactgcttgt caaatgccta
      121 tgactccata cagcagctag ggaccctatg gagcagcaga tggaccatta aggtagtatt
      181 aatgtagatg ccatcagttt tcagttctga ctgggacata ctctttagaa ctatgagcag
      241 ctgctgccat ttattgtgac agcttcctgc taacttttgc caactggcac aatctgactc
      301 tttgtacctg agctattaaa tgtgtgactt ccacaatttt attcctccag agaactgttt
      361 taataatcct ctgaaaaagg gataaggcat ttatcatcaa agttaataca cacaccatat
      421 aattctattg tcctttcaca ctgctgtgga ttttacttca ggagtaagca taagcaagct
      481 tcccatgcct tacacaatgt c
//
LOCUS       KCPA01001292             699 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 141932tic ultra-conserved element locus
            uce-5260, sequence.
ACCESSION   KCPA01001292
VERSION     KCPA01001292.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 699)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 699)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..699
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="141932tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>699
                     /note="ultra-conserved element locus uce-5260"
BASE COUNT          209 a          150 c          130 g          210 t
ORIGIN      
        1 ttcactcttt ttctctcatc catcatcaac ttatctgccc gcaagtcaaa atggtaccaa
       61 ttattaatca aggccagagg cacccgttcc tgcataggag caccatgttt caactgtcag
      121 gtggcatcca tcccagcctc tctttgtcag caataaagaa aatgaaattg gactaatatg
      181 aatctcattt ctgccctgat taaaggccta cattttccct aggcattgcc tgaccaggtc
      241 ctgacttgtg agatattcaa tgttcttgta atgtcattcg gacacagcgc gcctgtctcc
      301 ttaggtcatt gttcttcaga ttcacttgtt ttacatggaa tataggctag aaaatctaga
      361 cttcctttgg ggtgttaatt aagaggagca tccaaaatta atcagcaaat tcactagggc
      421 gaaggggagc tgtctgaagg cttcgatata aaatgcactt ccagtacagg gaaatgagcc
      481 ttcggctatt gacaaagaaa aaacaagtgc acagacggca atctgacata aaaattcata
      541 tacgtataca attttacatt cattttcctt gtcagcttgt cacctttaat tataaaggtt
      601 gatttgctat ttggcagatc tggaaattgt aaacgcttgg ccatttgaat atcatcatat
      661 ggtcaatgtc ttcagaaaag aatgacacag gaacatacc
//
LOCUS       KCPA01001293             752 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 142042tic ultra-conserved element locus
            uce-2920, sequence.
ACCESSION   KCPA01001293
VERSION     KCPA01001293.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 752)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 752)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..752
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="142042tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>752
                     /note="ultra-conserved element locus uce-2920"
BASE COUNT          255 a          133 c          121 g          243 t
ORIGIN      
        1 aataatactt agaatgctac attgaatttg ggagatttca ttttcctttt aatacgaact
       61 tatgtaaatc agattcttta aaatccttta cagtcttctt taataataag ccattgtttt
      121 gacattccac ttaatgcact aataaacaaa aatttgttag gagtgatacc tacatacaaa
      181 agttatttaa tttaaaaatg aaagacagag aaagcattgc aaatttatga atagtattgc
      241 tatagttcta ttataaaagt tattataata ctgagcagtt atggtctgct gttaaggtgc
      301 ttctgttata taccccgtag tttgccattt gtaaacacat ctttttgatg tttctgccaa
      361 catcctggca acaaagcagt gcaatttcaa atgagctaat taacttaatt gttgatgaag
      421 catgaaacag ttcattcacc ctgttagctg caccatgaca acataagagt ctcagcccct
      481 gaagttactc atctatataa gcctatctgt agctttccat taagatctat tgcatgccaa
      541 atgagtatgg ctcttctaac aaagaccagt ccataatgta cataggtagc aaatcagtgc
      601 tgctgttgaa aattcagatg aacacagaaa taaatacttc gtgcagaaac ccattgcagt
      661 ttgaaggaaa aggtaaagct gtgtcactaa atgctctgat ttagaaaaga gctggctaaa
      721 ccaagtgctg catcatcact tttcagtcct ga
//
LOCUS       KCPA01001294             577 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 142151tic ultra-conserved element locus
            uce-7756, sequence.
ACCESSION   KCPA01001294
VERSION     KCPA01001294.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 577)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 577)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="142151tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>577
                     /note="ultra-conserved element locus uce-7756"
BASE COUNT          123 a          158 c          154 g          142 t
ORIGIN      
        1 ctgcctacac ctttggagga ccaaggacca ggttgatccg ccggtgcccg agggtgtccc
       61 aggacacaga tcaacaggaa gaggggaggg gtggctttcc ttcccccgga tcgcctttca
      121 gcccttgtgc caggctgggg acgctgatgg taccagagtc agcctttaaa agggagaggt
      181 tgcatcatgc ggggctgggc gggcctcggg aggcagaaac ctcatctgtt aaacatatac
      241 cgctctgctg gggaacattc aatcctctct ttgatggacg tccaagaaaa tacttcttcc
      301 acatcctaaa cttgttagca ccagttaatc atcttaacct tcttgaacac acactccaat
      361 gagtttccca tcgctggcag ctgttaaaga cgcagcgacg ctttttgcgc cagccttcgc
      421 aggcgaatta aacctcccgg ctgcaggtgg gagagcagca gcccacatct tgtgctggga
      481 tgcacttctc tgcccttccg agctgtacca ggtctgtgtt cctctgtgca tggcctcttt
      541 gtttgtgaag cagaagccct ggaagatatt tgtttgt
//
LOCUS       KCPA01001295             443 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 142259tic ultra-conserved element locus
            uce-76, sequence.
ACCESSION   KCPA01001295
VERSION     KCPA01001295.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 443)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 443)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="142259tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>443
                     /note="ultra-conserved element locus uce-76"
BASE COUNT          123 a           97 c           89 g          134 t
ORIGIN      
        1 tgcatgcatc tgtctcttcc tctgtgcttt cccttcttta ctcatccttt atctctttcc
       61 cactctttct cttttttcca attccattag cgaaagtaga taataacttg tgaattcaag
      121 tggaacttca tttctgaaac cgtacactcg tgctggaacc cattaagctc gatagcgaga
      181 aatgagagaa atcataatta tcaggccagt aaaatacatg aaacataaaa tttgtcaggg
      241 aaagtaattg aaattattgg agcagttggg tcctggtgct gtgcagaccc tcagtgataa
      301 tggaaaggtt acgggcaatg tttagcaatg ctgatgaggc ccaaggtgac tcaacaccac
      361 cacagtcagc aactttatgc tctgcttaca ttaatttgct aatccatctt tggaaatggc
      421 caggctgagc agcgcatcgg ggt
//
LOCUS       KCPA01001296             370 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 142370tic ultra-conserved element locus
            uce-6206, sequence.
ACCESSION   KCPA01001296
VERSION     KCPA01001296.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 370)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 370)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="142370tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>370
                     /note="ultra-conserved element locus uce-6206"
BASE COUNT           77 a          105 c          109 g           79 t
ORIGIN      
        1 ctctcctcta aactaattgc gcggtgtctg ggcgcggatc gatcggggct gttgaaatgt
       61 taatgccgcc cgtgcgccgc gccgcgctcc gctggcagct ccaattaatc tcaggtaacg
      121 ccgcgctcga ccttcgcctc cgagccgggg cagcagccaa gcgatgctta tgtaattaca
      181 ccgtgaagtg tgtaatcacc tgccctaatc cccgaggcct cgcaattggg ctgccaagtg
      241 ccgcgggccg gccccgcgga tgaatagcgg acaattaaag cggcgtgacg ggggctccga
      301 ggtgtccgct cgatcgtaat tagctgtaat catggggagt tttataagaa gcaatttagg
      361 aaatcaagtc
//
LOCUS       KCPA01001297             525 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 142476tic ultra-conserved element locus
            uce-3472, sequence.
ACCESSION   KCPA01001297
VERSION     KCPA01001297.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 525)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 525)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="142476tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>525
                     /note="ultra-conserved element locus uce-3472"
BASE COUNT          167 a           80 c           93 g          185 t
ORIGIN      
        1 caaatttggc aggaatttac atgaagtgtc agggtagaaa ttataaggtc ttctgtatgt
       61 ttaaacaata cagtgaagta agtattacgt tgtaaacgat gttgtttgca tcatgattta
      121 aactttgttt aaatactgtg atagcattat tgtactctgc ttggttaagc caggcggggt
      181 tgattatcat taagtgttat ttatttctat tttattaagc ctccttttac attcatgtta
      241 caggttaatt tatactttta tttcatgcac tacttggctt tactgattaa tatgccccat
      301 ggcattcaat aaggccaggc agtggaggaa ataagagtgg tattaatttc taacattgct
      361 ataaatttgc cttaataaaa ctagctcaat aacactgcag tagtagtaca atggatggtt
      421 ccaaattgtt agcaaagaca caactgaaag aacaacacag aatttaagaa tccctctact
      481 tgtattcaaa ttaggctacc tgttataata ctgagtgctc ttaca
//
LOCUS       KCPA01001298             546 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 142586tic ultra-conserved element locus
            uce-5898, sequence.
ACCESSION   KCPA01001298
VERSION     KCPA01001298.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 546)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 546)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="142586tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>546
                     /note="ultra-conserved element locus uce-5898"
BASE COUNT          171 a          106 c           97 g          172 t
ORIGIN      
        1 ttcaggttca tttttcccag ctctggagat gtgtccatgg gttgtatgct ccctgcagca
       61 ctggagtcag gagtcaatgc tgtttgcaca gctccctctg attatctctg cagcgcctgt
      121 aacctcagca gtaaaccagt ggcatatata tagttgaaca attatatgta ttgtgactaa
      181 atttccccca aagatctcat tcaggatgtt agagtgaaag gatcataaaa tgaattaata
      241 gctgattcac tgtataattt cctagttcaa tatactttag tgtaccagct aaatgagcca
      301 tacacagcat tcagctcagc cagttaacag ctttatcatt gagatctcag gcttagaaat
      361 aaaagcaatt cttctgaagt aattgcgtct aattaaaaga aacatttaaa aagtgtaacc
      421 aaaaggaatt catttcaaat ggaaaattaa tgctgaaaaa tagccctgag ctctcttgcc
      481 tttgctaata gctaagcatt ctcagaataa ttaaactgtt ttgagatgtt gatacctttc
      541 cctgtt
//
LOCUS       KCPA01001299             785 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 142698tic ultra-conserved element locus
            uce-837, sequence.
ACCESSION   KCPA01001299
VERSION     KCPA01001299.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 785)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 785)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..785
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="142698tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>785
                     /note="ultra-conserved element locus uce-837"
BASE COUNT          233 a          153 c          154 g          245 t
ORIGIN      
        1 acagtcacaa ctttaaatgt tttttaaatg tagttactgt ctttgatatc aagggactat
       61 gtgttcagat atacgctcac atgtccaact aactgaaagc ctcaatttgt gagaagaaga
      121 aaagcgaggc tggggacact gtacaaacgg tgtttacacc actgaagtgc ttttgaaatg
      181 gaaagactct gcatgaggag gcttgcagct atgccacagc cttgccgata ccagtgagga
      241 gctcatcttc aatgtagtgt tgaacgtagg tggcaaaact gtaatttctc tcttttttta
      301 aaactatttt ttcttctttt atttttgaaa ttttcatcta agcggcagtt tcttgtacta
      361 tagtgactcc tgctgggaga gttaagttga agtagctgaa ggtctcttac agatatatca
      421 actcccggcc agtaaaaaga tgtcctaaac gcaggagatg gagttaaact gttcccctac
      481 cttggacgca atggcttctt tcatcactaa gaacaaaccc ctaggtttta caattgagac
      541 tgagaaacta gtacagtact tgtacaattt ttgatctaca gcatcacgac gtgaagctgc
      601 aacaattaga tgtaaagggt ccattcatga ggaataacat cactttgacc ctttgtgtta
      661 gctcctactg ctaatctttc catacgcgtg aacttacttt caatttgaag aagatgaaaa
      721 agtcttttgc aaaaccccaa tactgttttc tgatctatgt acctgaatgt agaaacgtag
      781 tctta
//
LOCUS       KCPA01001300             901 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 142809tic ultra-conserved element locus
            uce-5383, sequence.
ACCESSION   KCPA01001300
VERSION     KCPA01001300.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 901)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 901)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..901
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="142809tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>901
                     /note="ultra-conserved element locus uce-5383"
BASE COUNT          263 a          190 c          186 g          262 t
ORIGIN      
        1 tggcatttta gtcatcatgt taatgtcaac aaacaaggca gattaatgct tataatcctg
       61 agctgtctca cactctgctt attagaactg taggcagatc ttcattagga tgaatgacat
      121 ctgaatctat aagctcatca caacagaggc accttcttgc tgtggtgtca ccctgcagat
      181 gacaatgtcg gccattatga atgacactcc acaattcgtt acttcctgcc tcaaattgca
      241 gttaatcttt catccaaact gtacacatgt gcagctttaa gtgggctatc acagcaagta
      301 cccagtaatg ctgcaagcac atggagaatg acagaaggta aattgcttgt caggaggtct
      361 gtatttcaat tcgcagcata ttccaaacac gttgtggtga aagctctcca caacagctgc
      421 tttcattgct aactattttt gatgtaaatg tcaataaagc tccaggccct ttcatatttt
      481 tggccaagac tgtccatctt tccctatgca ggctggcagg ttgagctcca tttatctact
      541 cttaggaaca tgtcctataa taatgattgt ctctggagac cgtttagagt gattgaaagc
      601 agtgattggg acaataggct gctgaatttc attgctggat tgggttgaca ggtgactgct
      661 tttatatcct ctggaggaga gatggaaata aaaacacagt tatgtctaat caacagacag
      721 gcatctacca attgcaaatc tataccttca gtttaccctt ctcatcagaa caacttaacc
      781 acgaattatt acaggactcc catatttctc cagtggccag agggttttca agaatggaag
      841 atagggaaga tatgtgttgc ctcactggag gtgagaagta ggaaaagaac acgtcacagg
      901 c
//
LOCUS       KCPA01001301             714 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 142921tic ultra-conserved element locus
            uce-7427, sequence.
ACCESSION   KCPA01001301
VERSION     KCPA01001301.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 714)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 714)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..714
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="142921tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>714
                     /note="ultra-conserved element locus uce-7427"
BASE COUNT          242 a           97 c          137 g          238 t
ORIGIN      
        1 atgaggaagt tcaggatttt ttctacaaga aaactccaat gaattagtgg tgactagaga
       61 gctgtgaaaa ataccccatt aggagatgat gggctaaatg taggtccatt tctcttagac
      121 aagtaggata acctttaaaa tgcatggaac aacataataa ttgggaaaac taaagctgac
      181 attagtttcc aagaaattct gtgagaacta tctatggaaa agacatcact gattgagaat
      241 aatgtactgt ttgaaacttg tgtatccatt tctttaatct catactcttc agtaaacggt
      301 acacttgtgt tcagttttat gatcaaaaac aaagaccaaa gaaggccagc ctcatttgat
      361 tgtgtatatt ctgcctgtct taattatcaa tagctgtaag gatacagtgc aagtgatctg
      421 gtaaccagtg gttctcgtcc tatactttta gggggaaaaa caattttaaa atgtataatt
      481 tattgttcag caataacgat gttgttaaaa taaaaaggaa ttagcaacat gtcttaattt
      541 cccaatagca ttattatatg ttgtatttca gtttactgta tattgtgttt ttgtatttat
      601 ttgtgtttgg aggtcttgct atgtctttaa atgctaataa acaaggacag tgtgtaagag
      661 tgtagaatgc tgaactctga aatgctaaac tgtgtaatta aaagtaagta ggaa
//
LOCUS       KCPA01001302             416 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 143021tic ultra-conserved element locus
            uce-3849, sequence.
ACCESSION   KCPA01001302
VERSION     KCPA01001302.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 416)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 416)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="143021tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>416
                     /note="ultra-conserved element locus uce-3849"
BASE COUNT          145 a           74 c           61 g          136 t
ORIGIN      
        1 tctcactaac actgacatga aagtcaaaaa cccatctatc agaatagcca catagcattt
       61 gtatgctaaa cacataagaa gcaaaaatag gcttagattg gaaatcaaag attggttgta
      121 tacaggtaat agagtgcttg aatgctttat tttaagatag aaggctcttg aaccaggctt
      181 tattattgaa ctaagactat ctatcctttt tgacactttt taaattaagt tcttcctcta
      241 atttatgttt ttgtcagctt tcttccctta cctggcttta aactgattct ctcaaagtaa
      301 taaactactt cagagaggag agaaaaaaat tttaatgacc ctaggaattc agattaacaa
      361 aatggatcat ttgtatacag ctgcaaaatt acgaaacctt ttacactgct tctaca
//
LOCUS       KCPA01001303             568 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 143132tic ultra-conserved element locus
            uce-2861, sequence.
ACCESSION   KCPA01001303
VERSION     KCPA01001303.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 568)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 568)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="143132tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>568
                     /note="ultra-conserved element locus uce-2861"
BASE COUNT          175 a          134 c           95 g          164 t
ORIGIN      
        1 tttcacctct cactgcaacc atttcctaca cagacacaga atttatataa aaggctttcc
       61 tcagctttca tcaaatctag gttgcaggcc tatttcgtaa cattaattct ctccctcacc
      121 aaccgccaca tcaattcagt actttataaa ctatttcagg gatccgattt atcaggcctg
      181 acagagcttc acactgaaat aaacagcact gcctctgctg agctcgctca gtggctccta
      241 tttatcatta tttaattcaa gggcctaaaa ttctctgaca ttattaatag taagatgaat
      301 cactggaaaa ctacagaatc tgtgaccaac gaggctgaaa taatccattt tggtgaaaat
      361 gtctacgtgg aattgcattc cctgatgggt agctgctctg tcattagcga ctccatatgc
      421 atgggtggta aagaactgaa gcatgaagtc cccaaagagt gggatacttc cattctcttc
      481 ccaacactta acaccaaagc agaaaataag ggaatgcagc acagctctaa tgcctctgtc
      541 agttgaattt aaatgtacta atttaatc
//
LOCUS       KCPA01001304             586 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 143240tic ultra-conserved element locus
            uce-6291, sequence.
ACCESSION   KCPA01001304
VERSION     KCPA01001304.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 586)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 586)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..586
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="143240tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>586
                     /note="ultra-conserved element locus uce-6291"
BASE COUNT          182 a          128 c          123 g          153 t
ORIGIN      
        1 gattaggatc caaacacata attaagaaag tcagaaaggt aacctcgctt tatccagtaa
       61 ttagggctgt tagaaatcag atactgtctc ttaaaagtgt tacaaataca cggcactact
      121 aaataacctg cactgctggg aaagtatact cgctatcaag ggcaaagctg ctatacactg
      181 aggtaacagt aaatgacaga ctgttgttca agtccattag ctgctatgtg ataggagcac
      241 attcactagc acacgacctg tgaaaaatct tagatctctt taaatctttg aattggattg
      301 ctgcattaat tcttaagaac tgcaatcctt caaccaagtc aaattaccct cattaacagg
      361 ggaaaaactg cctctgcaat aagttaaaaa aaagagatat ttattaccta taatcacttt
      421 cacgtacttc acctggaagt aaactgggac agaggctggc accagttcag ctgctggtgg
      481 ggccggggtg gaggggacgt gccgtgcacg tgtcaccctc tgtgcctgtg cgcgctcctg
      541 caccgacatt cagcgtgaat acgtgtgctt cttaaaaacc tcaatg
//
LOCUS       KCPA01001305             693 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 143349tic ultra-conserved element locus
            uce-1634, sequence.
ACCESSION   KCPA01001305
VERSION     KCPA01001305.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 693)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 693)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="143349tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>693
                     /note="ultra-conserved element locus uce-1634"
BASE COUNT          240 a          111 c          118 g          224 t
ORIGIN      
        1 attcttttgt tgggatccat tcaacataaa ctgaaaaatt taacatttta cttcctagaa
       61 aggaggatga ataaacaagc atagactatt tcataagatg tgtctgtcct ttcttgaatc
      121 agaagaactc caggtttaaa taataaatta agcatagcct aaaatgcaaa tgtagtttct
      181 ctcaataaca cagtgagcta ttaagagaaa gtgtaaaggg ttatgataat tttaaagtat
      241 tatgaactac agaaaacaaa taaaaagcat tttcagtgaa tatgtccaat tcattgaact
      301 attctctcaa tccacttaac tacccacatg tgtacaataa tgatttatag acattatacc
      361 taattatgca tatttgggct gtgttagagt gcctaacaaa agctctagaa agcaacaatt
      421 acctctgttg cttagctaca tagtttaaaa tattcctatt aagtgcagat tattgtggag
      481 gggaaaaggg ggacaaaaat gcacatgtgc accacaatgc atttcacttt actgctgcca
      541 aactgttagc attttgggtc atttccagtt tacataattg tttggttcaa ctgtttgtta
      601 tacgttaaaa gaaaatattg attaattctt attcttcttc agaaaattgg actcacgcag
      661 gcagaggtgg ccttgtgcac tgtgtgcata aag
//
LOCUS       KCPA01001306             596 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 143459tic ultra-conserved element locus
            uce-25, sequence.
ACCESSION   KCPA01001306
VERSION     KCPA01001306.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 596)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 596)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..596
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="143459tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>596
                     /note="ultra-conserved element locus uce-25"
BASE COUNT          202 a          123 c           93 g          178 t
ORIGIN      
        1 aaccttcagc tctatattgt aaatgtatta tgtctgtcca gatcaagtaa tttgcgtcaa
       61 gataaacata ttgcaggtac cgcaaaaatg ttagtaaata aagaccatat gcatatattt
      121 taaatttaag gaatatttga ctattaatgg atatcaaagc aaagggaatt ttaatcatct
      181 ctccattcag tctcagttgg gtaaatcata tctaagagat ttgcataaat ataaaccatc
      241 aaagactttt catcttcaaa gggggtttca agaccctata agctttgtac tgtaatcatc
      301 gcaggtcaca accctgcagg aataaggctg ctatggcaac ataaaaaact aatgcttaag
      361 gcttagcata atattctgac taatagaaag gaaactcatt ttaaaagctg gcagcctatt
      421 taccagaagc tggattagag gtgttatttc cccttttagc ttcccccccc cacccctccc
      481 caaaagaagg aaaatctaat cacccagatc ttgcaatttg cagtaacttt acaattaggc
      541 caaaataaat cacagctttc tctgatgaag aattctgtcc tcccatctct gctctg
//
LOCUS       KCPA01001307             706 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 143566tic ultra-conserved element locus
            uce-4681, sequence.
ACCESSION   KCPA01001307
VERSION     KCPA01001307.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 706)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 706)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..706
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="143566tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>706
                     /note="ultra-conserved element locus uce-4681"
BASE COUNT          218 a          148 c          158 g          182 t
ORIGIN      
        1 tggagggaat gggcagcctt gtgacgttca cagcgactcc tggagcccat gagcccaagg
       61 ggaccagtgt tgctggggcc aagggtgaca cagggtttta tccttcagcc tctgtgcctg
      121 tccctgcaca tccagcatcc cctggctggc agccttcctt gagcaaacaa agcgaatgct
      181 gccatcaccc tggccactca ccgtccagga gagaagggga gcggcgtgca aagcaataca
      241 gggaaaaaag ccaatttcat ctttattaga aggagatttc tcttttagta ataagcacac
      301 ttcaaataat tagcgtgttt tacgtaataa tgaaattatg gaaatgcagg ccacttattc
      361 aaacaagtca ccattaccat atttttaaat attagactta attagagttt atcacttcag
      421 agaagtatga ggagtggaga tttttttcct ttacaaaaaa aatcctcata aagtgtttat
      481 taagagcggg taagaagggg ataatgatct gtttggaaat taaggcaatc aaacatttaa
      541 tgctctgcac tcctgtaggc aaaagcattc aaatgagtca attatacatc cattatccag
      601 gcacgattaa acaaggcagg acggggaatt tgtcctccgc atcatgcgat tgtcgcgagg
      661 acttatgtcc acttaaaggc agctaataaa acactaaact tgggaa
//
LOCUS       KCPA01001308             638 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 143677tic ultra-conserved element locus
            uce-1802, sequence.
ACCESSION   KCPA01001308
VERSION     KCPA01001308.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 638)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 638)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..638
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="143677tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>638
                     /note="ultra-conserved element locus uce-1802"
BASE COUNT          186 a          109 c          142 g          201 t
ORIGIN      
        1 ataccagaaa tatgtggaat tttgtcctct aacctcttgc cagttatgaa caaaaggatg
       61 ctgggttgag tttggtcaga atgatccagt taccagcctc atgccaggcc ttaaaagggt
      121 taaagatgtt aatggtgccg ttaaaaatcc agcttgccaa tgagctattt tgcgcaaatg
      181 gtataaatat aagatacact tgtctggctc atttgcaagc attctttttg acttctttca
      241 cacaactggt gtttttgtgt ttaatttaac aagaaatgag tagtaaatga aagctgctgc
      301 ctgaaatccc actgtgagcg tgttttgcac ttggctcccc agtgaaaagg caatttgtga
      361 aattatgtga tagagtaatt agatgaagcc ggggcttctg attgttgcca tgcttatgtg
      421 gtaaaggttt gctggagaca cggattatta ccctggcaag ttggctcaaa gcttcttcat
      481 ttatttgtaa acagaatatt tagtgaccgc ataggaagta gctgtaatca ccagctcgta
      541 aagaaaccac agcagagctt ttggattttt acagagtgct catgtaaaat ttaagctggg
      601 aggcagaatc cctgttaatg taattaggat ctaattta
//
LOCUS       KCPA01001309             607 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 143783tic ultra-conserved element locus
            uce-4083, sequence.
ACCESSION   KCPA01001309
VERSION     KCPA01001309.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 607)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 607)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="143783tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>607
                     /note="ultra-conserved element locus uce-4083"
BASE COUNT          204 a          108 c           95 g          200 t
ORIGIN      
        1 acctttccac aaatgcagaa tataatttat aacttctcag tattgtgcta taaacttaaa
       61 agaaaattaa acaaaatgta ttctttttta atgttattgt gaaatggtgt tccataatca
      121 aaacatctac tggaaacatc tactcagttc ctgaaaccat ctctattaga ttatgtagat
      181 accatctaag aaaatacttc taaacttaat ctgtcaagac ttcaaagagt ctataagcaa
      241 atacttagat ttgcattaga tttttgactt tgaaatccat tattgtaagt tccttgctga
      301 ctttgatgtg ctgcctttac acctcctctc tgagaaagga agtgtaaagg cagcacatta
      361 gtttatagat gttcacagac tgtttttcgg ataaggccat ttaaatctct tttgaaggtc
      421 aatcccagct cttatcattc aagaagtaat aataacagag agagtctgcc tagactaagg
      481 actgctttaa aacacaaaat agcaggggtg gaatgaactt acttaactct tgacctagca
      541 caatatcagc attccagtgt tttgctgtga caatgccctg ttaaggcata gtgtgaaatt
      601 tcaatat
//
LOCUS       KCPA01001310             688 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 144000tic ultra-conserved element locus
            uce-2849, sequence.
ACCESSION   KCPA01001310
VERSION     KCPA01001310.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 688)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 688)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..688
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="144000tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>688
                     /note="ultra-conserved element locus uce-2849"
BASE COUNT          205 a          126 c          156 g          201 t
ORIGIN      
        1 aaattaaatt gatctattat agtgcatagg aggggggagc tttccagttg tctttctaat
       61 gtgtacttta ccaaataaag atagaactgt gagaaggcaa accccatgtg ccatgcctgc
      121 ctcgaagggc aggcagaatt gtctttccag gggaggacat taggagaaaa gcaaatcaag
      181 gcaatctgat agggaatcgg gactctgtca ctcagaggcg agatattgtg ctgtgtccat
      241 atactttgtt tacttttatg agttgtaacc tgcccatgca agctgttaat gaggctaaat
      301 ctttctgctt gaggattgaa ttacagcaca cctctgggct aatggttata aacagaaagt
      361 cccattaggg ctgcattctg attcagtcat ttgcactatt gtgccgagaa caatgctgag
      421 taaatagcta caaacaaaca atttacatgg aaatggataa aatgtaccta attagtattt
      481 tgttgtttta ttaatgattg cttaaactaa atagtactta gcaacggctc tcaccagcct
      541 ccgcaggtgt gggatgctca agtttctggg gaaggctgcc agaaaattag gcagtttgtt
      601 atattccact tagttcaggt cagcagccag tacctgggat ttcaggtcat tatgtcaata
      661 atacataaac ttattggcaa gccaagcg
//
LOCUS       KCPA01001311             738 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 144110tic ultra-conserved element locus
            uce-7692, sequence.
ACCESSION   KCPA01001311
VERSION     KCPA01001311.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 738)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 738)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..738
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="144110tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>738
                     /note="ultra-conserved element locus uce-7692"
BASE COUNT          225 a          154 c          152 g          207 t
ORIGIN      
        1 taataaaatt ttccctaatc gggctctgtc agtgaggtgt cttatcgtgg ggaggaaaat
       61 gacaccgatc ctatcgaaaa acagagacga tgtcacagtg tccgcaatca cagctactca
      121 gcctccatat ctaccttctc cacaaacacc aagcactgct ttttcataag aacatcaaaa
      181 cctagcgaag tcattaaaat tgcacccgcg tagagttgca gggatcagcc gcactagcgc
      241 aaaatgggat gtgggaaaac agactctcta aatgtgctaa ttccattgtc acgtgtttac
      301 ggcttaattt taatcagtta aaaaagccac acattgcaat aaattggcat tatcttctgt
      361 gacaccagag gacacagttg gttcaaggat ttagagggtc gctggcaaca gtatatagtg
      421 ttacagacaa agtattttta cgcttgaact atggtagcta aggtgcaatc ctcagttaag
      481 actgcaaaca aagactataa cccacacagt actaagttca acatgcagac caccttcagc
      541 ctggagccag tgtagaatgc taaactggat ggtgcttttt ctgatttaac ggttaaaggt
      601 aatttgctgg ccagtataat tgaggttgca gttcagtagc attctcttat gtgtcctgta
      661 ccataatgaa gaaggatcta ttggaaaaac ccctttgctg tatttgcatt cagtttctaa
      721 actggtagtg cttgttta
//
LOCUS       KCPA01001312             346 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 144212tic ultra-conserved element locus
            uce-3126, sequence.
ACCESSION   KCPA01001312
VERSION     KCPA01001312.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 346)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 346)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="144212tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>346
                     /note="ultra-conserved element locus uce-3126"
BASE COUNT           99 a           67 c           72 g          108 t
ORIGIN      
        1 agtgcagtag agaatgaagg tagcagtggc ttgtttgttg ttccactcac tgagaacttc
       61 cagtttccaa cagctcggct ctgagaacgt ggaggcacaa cacgcgaact gttgtgattt
      121 gttgccatga tgacagtgtc aacttaacta cagctgacaa acagttttta aatagaacat
      181 ttcaattcat tatagtattc tccatctgtt ttttttcacc gtctgcatac atgcaaaaca
      241 tccgagaaat gctagcttag tttacttatc tagccgctaa cattaattag ttgttgagag
      301 tggtagttta gggagcaagt aaaatgatgg aattctcccc tcagta
//
LOCUS       KCPA01001313             258 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 144320tic ultra-conserved element locus
            uce-4939, sequence.
ACCESSION   KCPA01001313
VERSION     KCPA01001313.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 258)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 258)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="144320tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>258
                     /note="ultra-conserved element locus uce-4939"
BASE COUNT           71 a           47 c           72 g           68 t
ORIGIN      
        1 ggggagtgaa tttgtgtgaa gagtgacaga acgctttgtc cagcgcagct ttggctggtt
       61 gtaacaagcg tcaggacatt agacgcaaca aaagctggat tggcagtatc atcaatcaca
      121 gctctgacag tcgacttcag tttgtttgtt ccactctgca taataagtga ttggatcagg
      181 tttaattaga tattgggtaa tcaatcattg ccaacaaggc aacccagctt gggatctaga
      241 tgctgcaaag gggggggg
//
LOCUS       KCPA01001314             681 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 144426tic ultra-conserved element locus
            uce-5757, sequence.
ACCESSION   KCPA01001314
VERSION     KCPA01001314.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 681)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 681)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="144426tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>681
                     /note="ultra-conserved element locus uce-5757"
BASE COUNT          183 a          176 c          158 g          164 t
ORIGIN      
        1 aaaactcttt cttgtaagcc tgaagaagca ctgaaagctg catcttccct gtacctgctg
       61 ttcatcacgg aggaggagaa gagcttattc caaggaaacc aatggatcca aactcctcgc
      121 caaagtagac tcagttccct tgacacaaca tcctaattcg actttttcag tatctttcct
      181 tcaacaacct tttttccttc ctccccttcc tacccagcaa ctgcgcattt attaattcat
      241 gaggcactaa ttagttcttt gtttaatttt gtgttaaaca gactgaccgg aatgataacg
      301 acttgcagcg ttgcattacg gtccccaacc gcccctgttt tctgacaaca agggagcgca
      361 gtgagactgg cgtgatgaac cccaattccc actccagttg cacttcatta agtcaaaatg
      421 tgacaagaag cttagagagc aactttcaga tcggatcgca cataacaatt gggcaggaaa
      481 ctttccaagg gggaagcgcg agaggcactc gcagtgaagg ctggcaccat gtgcaatccc
      541 ctggtgtgcc tgtcttaaag gagccagctc aggctgccca ggcaggagtc agggcatgtg
      601 ctgagagcag cgagtgccag aagggcagca agacaagccg aaggcaggac agggtgctcc
      661 ccttcaataa tgggctgtgt t
//
LOCUS       KCPA01001315             702 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 144519tic ultra-conserved element locus
            uce-1313, sequence.
ACCESSION   KCPA01001315
VERSION     KCPA01001315.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 702)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 702)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="144519tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>702
                     /note="ultra-conserved element locus uce-1313"
BASE COUNT          199 a          151 c          136 g          216 t
ORIGIN      
        1 ccgggcgagg ctgctgaacg ctgcactttt ggattcaatt aaagtgatta tctgttgtgc
       61 caaataaatt gtgtccagca tctatcctgc aggattttac acctccagcc tcattattcc
      121 ctaactgttt cctcctgttt atgctctctc caattaaatt gctgataata tccaaaataa
      181 aaaacgagcg caccttgtcc ggagaaaatt gattcctcct gcaccaggcg attgccaggt
      241 tttatatact ctgttcctgg cgatcattag taattcaatt ttctttttat tagccccctt
      301 atctgctgag caatatagtg gcagagctga cctctttctc cctgattaat tttgccagtt
      361 aaggaaaaga ggagaaatga tccggctctt tgccatcaca atgaataaag cttaatgttg
      421 attgtgatgg aatttctaat gccaaggaaa ttgattgaac gcagcaatta ccccgcaata
      481 ggaactccag ggaaatggga tggccccggc cgtagccttt tggttattta aaacaatcca
      541 atttgcaagg ataattatat attagtgttt tatctgccac cgggaatgaa catgggaatt
      601 ttgatactgg cccggcatta gcaggttatt gctgcaaatt actccagatc tgctttcttt
      661 cacataaaga cgaaattagg ccatcaataa ccagaaaaag gt
//
LOCUS       KCPA01001316             888 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 144628tic ultra-conserved element locus
            uce-692, sequence.
ACCESSION   KCPA01001316
VERSION     KCPA01001316.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 888)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 888)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..888
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="144628tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>888
                     /note="ultra-conserved element locus uce-692"
BASE COUNT          291 a          123 c          151 g          323 t
ORIGIN      
        1 taaaataata taaagcattt cattcctcag atgcaacttg ggaagattat attgcctgct
       61 gcaagaagtt tcttgtaagg aattttcctg tgaaatgctt gattgagtca atcaaaagat
      121 gggatattgc acatttgata attttgcaca tggcagacaa tatttcgtac cggtaggtca
      181 tttgattctc tgcaggtggc tctgttggtt tctggaatat tgtactgtga attacatgtt
      241 acacaaatga aaggctgtta taattctgga taacattgta tttgattcta taaacatctt
      301 taggcctaat gcaaagatcc ctttgaataa tttatccagc taagtgtctg tggtcccaaa
      361 cttctaattt aaaaatgttg ataaatgaag tatctcttta gctaataaat gaagtatctc
      421 tttagttatc ctttgtcagc aacattcatt ttaatggaaa gtgagtttac agggttacat
      481 gattgaacta ctgagccaag tcagtgttgg caaatgatgg gctaaattat tgatgttaca
      541 cactaatgaa ttctgatgag aaataaaata cagacattac atttcaagtg gttcataatt
      601 atttttgcac tttaaaagca attttattct ttttccaaat catactggtt ctgtaaaaca
      661 aaaacatagt tagtgattat aagcaaaatt attgagtttg aagcaaaaat gcttttgtaa
      721 gttttcttat gaaagtataa tgctattcac tctaggattc tgatttcttc ttatacttct
      781 gggagaggat aattaaatta aatgtctgaa ttttcaaact gctgtgttta aacaaaataa
      841 tctacttttc aaccataaga gttcagtaga tgagtttata atctttga
//
LOCUS       KCPA01001317             582 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 144840tic ultra-conserved element locus
            uce-2247, sequence.
ACCESSION   KCPA01001317
VERSION     KCPA01001317.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 582)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 582)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="144840tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>582
                     /note="ultra-conserved element locus uce-2247"
BASE COUNT          153 a          117 c          147 g          165 t
ORIGIN      
        1 atcccggcaa ttccacgcct tcgggcggtt cgcagaatgg agatttttga catttcacaa
       61 ataaaaagag atgcgggtta tttatgctgg gatgttgctg caaagtcctt atctccatgt
      121 ggcactaaac aaggatttgt tgtgggattt gagagggctg tgtagtgctt cagtgttaag
      181 cacccaaaac tctgggggac tggcactaat ttcctctctc tcgtaaaaca acatagtatt
      241 cataacaact cgagaggctt gacataagta atgatggcat atgcaggcga agattaccac
      301 cccaacagtg taatcaaggt gctaggtact aatgcaagtt aaattgagac aataatgctg
      361 aaacttgcat tgtgggatta ggagagtact tgaaatgctg acatcggcat ctcctggaag
      421 cgcgcctgtc ttcctttcaa ttcctgttta tacttaatga cctcaaaatt tgtatgtcgt
      481 taacaccgcg ttctgaagtg ggagagaacg aggtttggga gggagaagat tccctgcctt
      541 cgttgacttt tgtctctcct ggcaattggc ggcggctcgg gg
//
LOCUS       KCPA01001318             646 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 144949tic ultra-conserved element locus
            uce-4931, sequence.
ACCESSION   KCPA01001318
VERSION     KCPA01001318.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 646)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 646)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..646
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="144949tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>646
                     /note="ultra-conserved element locus uce-4931"
BASE COUNT          192 a          107 c          136 g          211 t
ORIGIN      
        1 aaaaaggttg gggtgggatg cagaaaagta actttaagga attacttgtt ttgccagtta
       61 ccagattctg cactcaattt ccaagtcctg gtcttattaa ataccagaaa aacaaactgc
      121 tggagcagca ttggttattt tgcaatgggc tgtgtgaaag ctgaggttat aagaactgtt
      181 taagatttga aatatttttg ttcagaaatc tgacatgatt tgctagttgt gacaactggt
      241 ttgacaatga ccagtgattt aggtctacct ataataagtg aattaatctg agttaaaaca
      301 tagtgatctg tcatgtttag agatacctca acagctggct gacttgtcct ctgtcaagct
      361 agtttgtcct gtgcaaatct tctgtcaagt acggaaaaga actgttgaga gaaaattaca
      421 tggcagtttc agagttagtg atgaattttt ctcccgacat accagctgtg ccagcaacac
      481 tattttttgt ggcattaatc aaatatcttg cctggagcac cttctctttt ccgaaggcta
      541 gaagatgaat ctgtcaaaaa atttcactga gttttgccaa gagcttttcc taagctcaag
      601 tacttagtac atgcactttg gaagtttgaa ttagggatgt tgtaat
//
LOCUS       KCPA01001319             537 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 145056tic ultra-conserved element locus
            uce-3227, sequence.
ACCESSION   KCPA01001319
VERSION     KCPA01001319.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 537)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 537)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="145056tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>537
                     /note="ultra-conserved element locus uce-3227"
BASE COUNT          193 a           86 c           95 g          163 t
ORIGIN      
        1 aggcagaaaa ctaaagaaat aggggtcaaa ttccttctgt gagatctacc ttgtaaaatt
       61 atccagaatg taataatacc atgttattga cttaagcaca gttccctgtg acatgctgca
      121 gctgacctgt aatttttatc ctacatgttg ccagcactat taaaatgaca cttgtgaatg
      181 taaattaagc tcacaaaggg gacagattgt atgattctgg tttctctcag atgcctgtag
      241 gctatcacag gttccatatg tgaagtaatt atgttcactg aaggaaagaa taaatgctgt
      301 caaattgtgt actgagagag aaagcagcta ttatattgca gtagtcactg gagcattgcc
      361 ttagaaagtg aaaagatgta taagaaaata ataaaaaaga aaaactggag cagagctata
      421 ttaaatataa cctttaaatg agtatctgct tttgaataca tattacacaa agctaatatt
      481 tcacaaataa aaacacttta cctttttaat cattttcttt ctcacatcta gagggca
//
LOCUS       KCPA01001320             646 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 145166tic ultra-conserved element locus
            uce-2048, sequence.
ACCESSION   KCPA01001320
VERSION     KCPA01001320.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 646)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 646)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..646
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="145166tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>646
                     /note="ultra-conserved element locus uce-2048"
BASE COUNT          185 a          121 c          136 g          204 t
ORIGIN      
        1 aataagaaaa catggtaagt caacagatat taattcagtg tttaaggcag gttttaaagt
       61 accttcaata tatgttgctt ctaatgacat tcaagtgtgc ttaagggagg tcagaagtct
      121 tttcatcccc caggctccct taagatgcct ttccataacc aaattctttc atatgagtag
      181 tcgaaagaaa cctttagtca accactgggg agtctttaca gcctgccttc gactggggtc
      241 tgagtggagg cctgtgagca ggatttgtaa gcacttctaa tggctttttg atgtacatgt
      301 acaaaattga tgtcggaagg atcattgtaa actcccaaac agtggaatat tgaggacatt
      361 ttcaggtggc agtcagattc tggctgggtg agcccagtat attttctcat gtcacagttg
      421 attaggttca cagggaagtg gaaagagtaa aaaattctct tattactgta gcaatgccat
      481 atcagcctct tttccctttg aatgcaacat tagtttttgt ccagaactct aactgctttc
      541 tacagtttgg ggaattgtaa agcagaaaca attttcccag ctaggctgac cttcacagta
      601 atgagaaatg actggaattt ctctctattt ctctaacatt tggtga
//
LOCUS       KCPA01001321             656 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 145277tic ultra-conserved element locus
            uce-6165, sequence.
ACCESSION   KCPA01001321
VERSION     KCPA01001321.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 656)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 656)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..656
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="145277tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>656
                     /note="ultra-conserved element locus uce-6165"
BASE COUNT          202 a          131 c          125 g          198 t
ORIGIN      
        1 ggaacaggcc tgaagcttac tgagccaaag ccatgataat accttgctcc taataggtgg
       61 agagcttggc agcccagcac acctccagca ccaaaagtca gtgttgaagc agacaagttc
      121 catcactctc acggaggcac agtgagtggg caaaggaagg gagaaggaaa ggaaagaaag
      181 ggactaagga gtacatgcac ccacatgtga agctctgaca aacagtcgtg tgatttatca
      241 tcatactccc acttgtaact ctaacctaac agtgtgtcat ctttactttt catgttattt
      301 atttacaagt gcattttcag tatcaaccct ttcattcatt aatcctaatg tggccttttt
      361 caatgtctac ttaccatttt aaatacttac tataatttac agggctttct tgaacacatc
      421 caaggtatat tatatggggc tagcttaatg gaaagtcttg tacaccaaag caggaaaaaa
      481 gcacatttaa tttatgatgc ctttgaattt tgctcataat ttacttctgg agaactattc
      541 atataaagcc acaccaatga gaattttcag tggcgatgta gaaggcaata agtgctgatc
      601 ttattattca tttttatttt gaaagccttc ccttgttgca ttctgggatt atgtaa
//
LOCUS       KCPA01001322             665 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 145388tic ultra-conserved element locus
            uce-4151, sequence.
ACCESSION   KCPA01001322
VERSION     KCPA01001322.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 665)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 665)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..665
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="145388tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>665
                     /note="ultra-conserved element locus uce-4151"
BASE COUNT          216 a          113 c          139 g          197 t
ORIGIN      
        1 aaatccaaat cagattccaa attagagatg tttcttgatg ctgtggcatg ggggagggaa
       61 aacaacacta gtaaaatggt tttattgaaa cttaaaggca attatttttg aattcccatt
      121 ttcttaatta aaagtgtcac cgatttggat ttaatcagca cttaacaagc cttattgtgt
      181 aaggaaagag ctaaacaatg tctgtaatag actgggaggg ttagctgaac tttgtttaaa
      241 tataaaggga gtagtgcatc tgctgaagaa ctaagccctt tcaaagttta ggacactcac
      301 cagcgccata gagcataaat cacagtgcaa actgtgtgat tgtaccctgc agggaaatag
      361 actgtgtgtt tatggggctc ttcaccaagc acttaggaat aatctgatat aaagcagcag
      421 gggaggagag taatgacaac ttcaaattag tttaatgaat gtttacatta aaaaaggctt
      481 ttctacaaac ctgaaaacac aaagtgacag ttccctcttc agacaaaaga aaccccctct
      541 acttttcctt aaaggactgg ccatggggga agacattata agtttaactc tttctgtggt
      601 agatcattgt atctttatgt gcagtgtttt gctgtcatta cagtgacagt tgctgggaat
      661 cccat
//
LOCUS       KCPA01001323             645 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 145493tic ultra-conserved element locus
            uce-3614, sequence.
ACCESSION   KCPA01001323
VERSION     KCPA01001323.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 645)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 645)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..645
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="145493tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>645
                     /note="ultra-conserved element locus uce-3614"
BASE COUNT          124 a          121 c          237 g          163 t
ORIGIN      
        1 cctgctgaat gtctgtccaa atcagaacca ccctgtatgt ctgggtgagt actcaccttg
       61 taatttccga cgatggaagc gaggagaccc caggaaacta ttcttgatgg agttgagccg
      121 tgtcctccaa ggcattcctc caatgctggg gctggatggt ggtgttgggt tgggtgtgcc
      181 tgctgggctc tcctttggcg tatgaacagg tgtccccttg ggggtaggga ggggacttcc
      241 ccttggagag gggtgagggg tgacctgtat gatggggata gatttggtgc ttgggtcagt
      301 actagaaggg agcaatctaa caggagacat agggttggtc tgcactttag gaacggccag
      361 ctgtgggtta aagccggcag caggcgagcg gccctgagca ttctgcacag ggttgttctg
      421 ggaagagggg gcgctggtat tgctggcagg gagtgggttg gatttagtag actggagtgg
      481 tttttcagcc aatttgctct tggatggtaa agtctgcgtc tttgggttgg gctgaagtgc
      541 tggctttggt tggagtacat gtccaggcct ggaggcgttc ctacaagcat cagggtccaa
      601 ggagacttgg ggtcggggag agaaagggag gtcggaggtc tgagg
//
LOCUS       KCPA01001324             514 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 145605tic ultra-conserved element locus
            uce-2841, sequence.
ACCESSION   KCPA01001324
VERSION     KCPA01001324.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 514)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 514)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="145605tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>514
                     /note="ultra-conserved element locus uce-2841"
BASE COUNT          154 a          118 c          104 g          138 t
ORIGIN      
        1 ggtgtgcaca agtgagttgt ctttgatatt gtatgaataa cagtttttat gcagaatcag
       61 attcagtacc tcaagcaagt ccagcagcct agtgttgccc aactgcgatc aacaatggtg
      121 gacccagcca tcaacttgtt tttcctaaaa atgaaaggtg aactggaaca gactaaagac
      181 aaactggaac aagcccaaaa tgaactgagt gcctggaaat ttacgcctga taggtaaaca
      241 aaacaaatac tccccagtca agacttccct gacagtccca ctacgagaat gctatggtgg
      301 gacagccaag tactcgtttc cacaccaaga ctcagacgtt ttgaggcaaa agccacattc
      361 ttatactgtc cagcttgtaa tgcttaatgt aaaacttacc agatgaacct tgtgtttcag
      421 cttttttctc ccctttgctt cagaggcctg acagcgtcgg actgttctga agaaatggcc
      481 atcttggtct tttctagaac atgtagacat ttgc
//
LOCUS       KCPA01001325             453 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 145711tic ultra-conserved element locus
            uce-6968, sequence.
ACCESSION   KCPA01001325
VERSION     KCPA01001325.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 453)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 453)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="145711tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>453
                     /note="ultra-conserved element locus uce-6968"
BASE COUNT          133 a           91 c           93 g          136 t
ORIGIN      
        1 ttatcgccag ctttgccata aaacatcccg ttttaataat cgaattagag ccgaggcaaa
       61 cctgcgcagg tgagaggaaa tctgtgagcg tgatcaaaac cacatttctg attcaggacg
      121 aagtcgcagg ctgcagggag gtacatctgt aaattataca ggaagctttc ttcgacaact
      181 gattcaccct gacagtttta ctggagtata tgaaaattag tattaaagat gtgatatgta
      241 ggcttctttc caggaattcc aatctggttt caataaaatg aaaacactga ttggaagtga
      301 agctgccttc cggttttgcc tttggctatt atgtgttcat tcgtgaaatg actgaattcc
      361 acaactactt ttaatattca ccttttgagt tcatctcccg taccggacac attggaatga
      421 ttaaaatagc actgactcct gaagccggat tct
//
LOCUS       KCPA01001326             563 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 145821tic ultra-conserved element locus
            uce-3007, sequence.
ACCESSION   KCPA01001326
VERSION     KCPA01001326.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 563)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 563)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="145821tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>563
                     /note="ultra-conserved element locus uce-3007"
BASE COUNT          138 a          123 c          116 g          186 t
ORIGIN      
        1 ggggagggtg tgttgtcaga gccttgtgtg gattactgag aaagtgcctc cacttcagag
       61 aaatctggcc ttatggtttt gactggagca tcatctcttc ctttaaaagc tctgaccaaa
      121 ttattgagct gataaacgat ttcccttggt tttacatgtg ctggcatgaa ttatccttga
      181 gtgctgcata ttagggttgt tttgtactaa aaggtgttaa acacttgtaa taaatatttt
      241 tccttatttc ccctaggaca ctgttccatc tctggttggt gaagcataaa aaagagctgt
      301 catgcccagt tttaataggc aataggattt caagccccca gagttgtttc acagtctggc
      361 agtggccata atgaaactgg ccactgttgc cacaagactt tttcctctca tgcgttctcc
      421 cctgttacct cccacagctg cttgactggc aggtctcttg caaaccgcaa acatatttac
      481 attggagcca gtagtacttc agctatctgt gccatcttta ttttcctttg cctggataga
      541 gactcatcct taattttaaa gaa
//
LOCUS       KCPA01001327             510 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 145930tic ultra-conserved element locus
            uce-7871, sequence.
ACCESSION   KCPA01001327
VERSION     KCPA01001327.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 510)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 510)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="145930tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>510
                     /note="ultra-conserved element locus uce-7871"
BASE COUNT          139 a           94 c           91 g          186 t
ORIGIN      
        1 aaaaagtcac aacctccaga gaggagaaag tgaactaaac taatcctatt aaacatggta
       61 gcatgtttct gtgcagctcg ctgagagatt aagcacagga aaagggataa gtgctgcttc
      121 agtttcacta aactaatgtg acaacttgtc attggaaatc tttacagctt gttagcagat
      181 gactagctga ttcagatatg ttttctacca tttcctttgt gtctgggggt gatgtttttt
      241 ctttcctgtt cctttcttat ccatactgct ttattttgct ttttaatcct tcatgtctcc
      301 ttcaagtcaa aacatttaac ttgctttaat caatattttg ttttgaagat gtcccttgac
      361 cttttgtttg tgcaaattaa ccttcaaggg caactcattc attcattaac ctcagtggga
      421 tgccatatcc cttgtacatg gcattttaag atgcataaag catttatgaa tgtttagata
      481 tattgcagtg aatgactgtg atactgctgt
//
LOCUS       KCPA01001328             608 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 146036tic ultra-conserved element locus
            uce-3027, sequence.
ACCESSION   KCPA01001328
VERSION     KCPA01001328.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 608)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 608)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="146036tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>608
                     /note="ultra-conserved element locus uce-3027"
BASE COUNT          194 a          122 c          112 g          180 t
ORIGIN      
        1 tgcattacat ccaggaaact attcatgcct gggatgactg cattattagt cacagcactg
       61 tgacctctca ccccaagtga taaagtacac aggtcagaat tgacaataca tactcatggc
      121 tgatcatggc tgccagttat tgatccaaag aaaaaaaaag aaaactttgc aggaaaaaac
      181 attgctctga attacaaaca tgcattctcc tgagactcag caactctcag ggtttttccc
      241 actggagctg gaaagcaaaa agtgagttca gccagtattt aatatcaagt gaatgtggtg
      301 tttaatcaat actattctgc ttttgttcca cgatgtggaa agcagtgtct attcattcag
      361 taaaggttaa tgccaagggt caagtgattt cacactctct gtaggatcca caacatttca
      421 gtagttcaga tgccttggac aatgatgact cagttggact gatttattgc cactctaagg
      481 tcctgcttaa tactaaagtg ctatcttatg ataatacctc agaaaatagc actgatgagg
      541 ctataattac ctacattttg aagtaatgtc ttcatctcta acatcctata aagatgtaag
      601 gtccattt
//
LOCUS       KCPA01001329             720 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 146149tic ultra-conserved element locus
            uce-1841, sequence.
ACCESSION   KCPA01001329
VERSION     KCPA01001329.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 720)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 720)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..720
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="146149tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>720
                     /note="ultra-conserved element locus uce-1841"
BASE COUNT          177 a          142 c          146 g          255 t
ORIGIN      
        1 tctgtggtac aaatagccat tattagttct agattctgat gtcatactct tgtaacaatt
       61 ctactgaaac taatgaaaca ctgcagtgaa tattgtggca ccggtgagag gaggattttc
      121 agacctgcaa atttatctcc cacgaacagc agtgaaatcc ttcagcagct tttggcactt
      181 ttgcttgttt gtatattctt catgtacaca tcatgtgcat ctgtgtgtac gtatatatga
      241 tatgtgtaaa agtacttttt atatagtaac tttctgcata gggcaaccca aacagctgtt
      301 attccttttt atagcttctt taatctatgt gccaacaagt cagtttacaa aatctgtttt
      361 gttgatgact gctgcgataa taattgtggt gttttgtggc ttggcaaaag cctggggtct
      421 cctccgagga ctcttgccaa agcctttgaa ggggttgagg tggattcact gccaaaatga
      481 gtcaccactc tctattttat ttagtgtcct tctgccaagg ccttagacac tttctgtttt
      541 cattcttttg taggctttcc ttcccacatt gtggtttcct tcacagccag agtaatgtgt
      601 ttgccagcat aggtgagaga gtgtggctga ctctccaaat gccactgcta gactctgctt
      661 aagggtttag ctattgtgct tccttgaatg tgcaagattt aattatatgc ctatgaatta
//
LOCUS       KCPA01001330             625 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 146259tic ultra-conserved element locus
            uce-3864, sequence.
ACCESSION   KCPA01001330
VERSION     KCPA01001330.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 625)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 625)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..625
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="146259tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>625
                     /note="ultra-conserved element locus uce-3864"
BASE COUNT          212 a           92 c           97 g          224 t
ORIGIN      
        1 ttatcctact ttggctatct aacaaacaat taatttctag gagaaaagtg gatagttttc
       61 ctttcttatt agcacatgct ttgccctttg tcgtggttta atttgaatac aactgcaaat
      121 ttaaaagtat tttattttta ctgcagctaa ttaaatcaat gttgtatttg tggagctgct
      181 ttaaagtatt aaagtaactc gatcccaaat gaacttaaaa ttttaattca ttttacctta
      241 tgctggctgt ggaagaagtc aaatttttaa atgcaatatg acatatggct gttcattatt
      301 tatacattct gtagcagact ataaatttta ctttggacat atatcgaagc actgaaacca
      361 tttctgttgc aaacacataa atcatagtta cagttattag tctaaatgta atgccaccca
      421 ggttctagat caaaaccttt aaaatccatt ataattgacg tctgctgcat aacttatgtc
      481 tgattttatt aaaggggctc attattattt atatctttaa aacattatat tcatagctgt
      541 gtaaccagtt aaatgtgaaa gatttgagga aaggagcaat agtctataaa ccagaaagaa
      601 taaggctgta ataggggaca aaatg
//
LOCUS       KCPA01001331             533 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 146366tic ultra-conserved element locus
            uce-6231, sequence.
ACCESSION   KCPA01001331
VERSION     KCPA01001331.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 533)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 533)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..533
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="146366tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>533
                     /note="ultra-conserved element locus uce-6231"
BASE COUNT          147 a          122 c          113 g          151 t
ORIGIN      
        1 gagctgctct cctccccagg tacggttaat taccttcccc taattgccgt ctcctggtca
       61 ttagctatgt gagctgttta ccccaaaaca tgtgcttcat cctaggagag ggttaatctc
      121 ccgctggatg caggatgccc tcatgggaat ggaatgtgta gtgttggtaa gtggttgtgc
      181 cccagaagcc tttgagagcc cactgactac tgcatgctaa cgattggtat tattaaagaa
      241 caattgatgg cctgtaacca aacaacagaa actaattact ggaaaacttt tattgtcctt
      301 taattactgg gcctctttgt caattagcag aagagagagg gagagagaca acaataaatt
      361 ttccaaaact acagtcatca gtagctgcag aagcgagtct attaacacac aatattaagg
      421 cctgatattt attctggctg ctaaatgtag gtgcttctct cctgaaaaag tgcagagctc
      481 taggaatact aatcactgcc actgcctagc tctcacttcg tcttacccct tgg
//
LOCUS       KCPA01001332             929 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 146475tic ultra-conserved element locus
            uce-1683, sequence.
ACCESSION   KCPA01001332
VERSION     KCPA01001332.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 929)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 929)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..929
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="146475tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>929
                     /note="ultra-conserved element locus uce-1683"
BASE COUNT          248 a          167 c          163 g          351 t
ORIGIN      
        1 agacaaggga aggaagaatg aagaaaaaaa ttccctcgat ggatgccaca atagcatgtc
       61 tttcattatc gccctgtgtc aaggcactgt gtaatgttca ttgtgcatgc atagtaaatt
      121 actatttacc tgccagtgcc tttgataagt cagtcttttc tccctctttt cgtccacaca
      181 gcatggaaca gtgaaacctc tttgcctata attcttatta aggtgatacc ttttctgaat
      241 aagaaagtac acacttccaa aggaggcatt ctcttgggtt tttaagggcc attgttttta
      301 ttgttttcct tttatttctc ccaccctgct gtgttttaat gctatagtga cttctgtgta
      361 tacaactctc atattgaaat gtctgccgca gatatatgca atattaaaga gtgcttatga
      421 atttttgaca tctaattagt cgctacccag ttaacatgtc aagactcaga gggattaggg
      481 agtcagccct ttctgaataa gttaaagcta tgccctgtcc ttttcatgta ttattcttta
      541 atgtaggtgg tgattatttt gctgtgatta attgatgaag ctcattggtc tggcaagtgt
      601 tacagaattc accattcctc acttttattt ctctctgtag ggctttcccg cttatttgaa
      661 aggaattggt tctattcggt ctgtgaagct tcattgtctt ttctcaatac atgcacattg
      721 gtttgtctta agattttatc aatttaattt tatatcttta aaggaagcag ataattaata
      781 atgcttgttt tattttaaat cacgtgtttc aaacagggtt tctctaatgt gttgtttgtt
      841 tttatttttg atttatactt ttagacaaaa ttactgacat tttgaagtac aaaaatagat
      901 tccaccccca cattcaacaa ggcttggtg
//
LOCUS       KCPA01001333             458 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 146586tic ultra-conserved element locus
            uce-7614, sequence.
ACCESSION   KCPA01001333
VERSION     KCPA01001333.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 458)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 458)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..458
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="146586tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>458
                     /note="ultra-conserved element locus uce-7614"
BASE COUNT          147 a          105 c           58 g          148 t
ORIGIN      
        1 taaaattcac ttcacaagtg tctcaggatg gaccgaatga acaaaatgat tacatctaca
       61 gttcagcaat ccatactatt taacacaacc ttcttctact cacactcact gcaaatcaag
      121 caacaaagca attcaatcca agggtagcat cacatgaaat gaagaggacc acaaggatca
      181 aataatttag ggactaaaaa gatatactta catctgggta ttcttttaca ggcacatata
      241 gtttctcttg taactgtaca ataggtccca cagcatctgg taattctgca cttctcttct
      301 ccgtactacc atttaatgtg tcgttataca tgtctttccg tactctgcta atttctgtcg
      361 tatattaggc attaaataca gtaacagatt ataatctaac atgacaatct tctctttcta
      421 ttatttccca aatcttaatg ccatttcctt cctcttct
//
LOCUS       KCPA01001334             688 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 146695tic ultra-conserved element locus
            uce-2586, sequence.
ACCESSION   KCPA01001334
VERSION     KCPA01001334.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 688)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 688)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..688
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="146695tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>688
                     /note="ultra-conserved element locus uce-2586"
BASE COUNT          195 a          101 c          133 g          259 t
ORIGIN      
        1 aatgagtaac ttcaggtgat acttatggtt cctaaaaatc caagtatcaa ctggtaagtt
       61 ttttgaaaat tgaatataaa atcatagaaa aatgctttat ttgattctct gtttatggga
      121 aattcatttt atttgacttt tttatttgta atatcaacta tattgcagag cagagtttct
      181 aggtgctccc ttatggtact attcttctaa attattaatg ccgtactgtt gatatattgt
      241 cagccttgta catacattct atgaaaatga gttttacagt aggctgggat ttataacaaa
      301 gcttgacata tgcagctaat tcacctagac agtcttgtca gttttaggtt cataaataat
      361 tgatactcag ggcttggagt tcagctactg ttagtgctcc agctgttaaa tttcagcagc
      421 ataatggatg aatatttgtt tataatttct gtacatggac ccgatgtcag atccctggtc
      481 tcatttacat aggtagattg agatgttgga agtgtaatga gcatatgaag atgatgaatt
      541 gttttcctca gtgctggtgc ttttctgtaa atgtttgatt agttttgaat ggattactgt
      601 tagattatct ggttcagggg ttaaagtgag cagctctttg ctcccaaagc tttcgtgatc
      661 ccttgctgac agattttaaa attcatac
//
LOCUS       KCPA01001335             480 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 146797tic ultra-conserved element locus
            uce-5426, sequence.
ACCESSION   KCPA01001335
VERSION     KCPA01001335.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 480)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 480)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="146797tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>480
                     /note="ultra-conserved element locus uce-5426"
BASE COUNT          134 a           76 c           95 g          175 t
ORIGIN      
        1 ggtttgtgtt aagtaaaagt taaatcacac tgcaagctgt aggaagactt gttctagaaa
       61 cacccagtga tagagacttg attaataagg ttgaactgtt actgtttaac aatttgtaga
      121 cttttttttg ctttggattt ctctgctaca ctagttcgcc atgtagcaat tgcactgtgc
      181 aatattacaa tatgaggact gggtttttta tggatgtaat gtctcttaca gtttgcgata
      241 gtatttcttt ctagttctca gtgatttaaa tgtgaccaag ccttctgtac tttgtcacaa
      301 aaagcgggtt ttccaggtga ctattttggt gagtgtcaaa ataagaattt atggtgtatt
      361 actgtcaaga ttcactttga attaaaatat atattgcagc aggtgacttt cggtggcttt
      421 taaaaattca ctttcaactg agattagctt tcccatattc agtgcagcca caccttgaag
//
LOCUS       KCPA01001336             625 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 146999tic ultra-conserved element locus
            uce-7419, sequence.
ACCESSION   KCPA01001336
VERSION     KCPA01001336.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 625)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 625)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..625
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="146999tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>625
                     /note="ultra-conserved element locus uce-7419"
BASE COUNT          172 a          137 c          170 g          146 t
ORIGIN      
        1 gaggaccttc aaatggaggc ctcaggagcg agggcagctt ccttttgaaa gtggcctttc
       61 tggaagccat aatcggctct ccaactttac agtacacatg ttccccagta aatgtgatta
      121 aagagccaca cccccttgca gaaaattaat tcagtttcca gaataaaaag tttgataaag
      181 ttgtgcaatg ctccaatgac aacacataat agaagtgcag agttttatcc tcttgaagga
      241 taaatgagcg gccagaaagg tctggtagtt cccagagtaa aaacatctgc tacagctaat
      301 tcactttagc ttttgattgt aaaattcatt agccatatca ggcagctgta gtttcaaaca
      361 tgttgctagg aagtacagtt ttataggctg ggatgccgtt tgttctcccc agcagtggcg
      421 aggtagcctg agtgcccggt gaaacgcaac ctcctgccac cgggagaggg gagggaggct
      481 gggaggaagt gcagggcgaa gaggtgccaa gggctgtcag ggccatggtg gctgctcctc
      541 cacggcacca gagcagcagc agctgaaggc tccagccttc ctgcagcact gggaaggaga
      601 cggttttgtg aattaggaag tgaac
//
LOCUS       KCPA01001337             405 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 147109tic ultra-conserved element locus
            uce-629, sequence.
ACCESSION   KCPA01001337
VERSION     KCPA01001337.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 405)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 405)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="147109tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>405
                     /note="ultra-conserved element locus uce-629"
BASE COUNT          145 a           73 c           66 g          121 t
ORIGIN      
        1 ttataaccac agaggatcaa cccagctttt attcttccct cttcaactaa agggcagctc
       61 ctttctcttt taatggcaac agcttgagag ggacaaagtt tgaatatcct tgtgccggag
      121 aaaagagcag agcgaaagcc ctgctaatta caaaagttgc tttatgaaag ataattcaaa
      181 gcaataattt agcaaacata atcaagtagc gcagatgggg attttgatga atagtttgca
      241 acatgcaatt agcagctctt gcagttacat atcattaacc ctcagagcac aaaaattatt
      301 ttctcattat tagatgaaaa ggtaaaatta agctgactag acagtaaagg aacaaactac
      361 aattaattac cttcatttat tacagtcatt attttaaact tattt
//
LOCUS       KCPA01001338             543 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 147217tic ultra-conserved element locus
            uce-7982, sequence.
ACCESSION   KCPA01001338
VERSION     KCPA01001338.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 543)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 543)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="147217tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>543
                     /note="ultra-conserved element locus uce-7982"
BASE COUNT          179 a           93 c          102 g          169 t
ORIGIN      
        1 acacatataa agccacgtag atgtgtatgc acagataaac tccctcctcc ttaaatgcct
       61 taaatcattc tctgcagttt cctaggaacc acactccaga tgtggtattt aagagtgaat
      121 gtggctaacg tttattagac ttgaactgta ttgtgggtaa ttgtccagta ataacctttg
      181 gtaaattata tgaagccttt actttactta acagggaatg caggctcccc aaactctaat
      241 attatcatca ttcaagataa tgagcaacac aaaccattct attaccaatc taaaagcaat
      301 aaatgtcaaa gtaaagaact atgcaatatt ctggcctgga agaacaaagg acaaaagtaa
      361 tgataatgcc tttttatatt tgcagtctat tatatcatgc ataacaaatg accctgtaat
      421 tgtgttattt taacaggttg taaagggaaa atggtggggg tggaatgttt tgaacgctgt
      481 agggctggta aactggaatg cctgatgatc tatttgaatt ttatcctgga tgattctgaa
      541 gct
//
LOCUS       KCPA01001339             650 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 147324tic ultra-conserved element locus
            uce-2875, sequence.
ACCESSION   KCPA01001339
VERSION     KCPA01001339.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 650)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 650)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..650
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="147324tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>650
                     /note="ultra-conserved element locus uce-2875"
BASE COUNT          224 a          111 c          107 g          208 t
ORIGIN      
        1 caaaacacaa aaagcagaac ctcaattaca tgcattttaa ctggttcttt gcatagtctt
       61 ataccaaact atcttttccc gttttctatc ctctgttaaa aactgtgctg cttaatgaaa
      121 taattttgtc tggtatttgc atgatgaaaa tattcaagac aaaaattgca agatgacaaa
      181 atcttaatat gcagtttggt aaagttctag tcagtccctg aacaacacgt ttgtctatcc
      241 agtaaagctt gtgttaatgc gatgtaagag tttggcaaat tcaactctaa tggagcataa
      301 aagtgctttt gcttgaaagt gagatcattt ttaaaaattc aaagcatgat cacttttccc
      361 tttttttgca ggaacaatct gatacaagca gcaaagctta aataaactag aaacatttca
      421 aatgatccat aaaggattaa taagcactgc aggaagtcct ataggctcag cgtatacatt
      481 ttccatcttt ttcttctgcg acaggcatga cgtgaaattc taaacagaac tcaagtttca
      541 aagtcactga atgttaaggt ctgcagcttt gataccaagg gagagtgggg tcaccatctt
      601 ggaatattta atttaaatag ataacaaaaa tattgatttt attagcataa
//
LOCUS       KCPA01001340             513 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 147434tic ultra-conserved element locus
            uce-6920, sequence.
ACCESSION   KCPA01001340
VERSION     KCPA01001340.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 513)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 513)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="147434tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>513
                     /note="ultra-conserved element locus uce-6920"
BASE COUNT          173 a           81 c           82 g          177 t
ORIGIN      
        1 cagttttatc actaatataa aatcacatta tctattaaaa gtgtaaattt gtgtcttgca
       61 gacttaaaac tgctggatac tgcaacaaaa atcatgcgta tgttggtttt tattattaac
      121 tctagctttg aattagaatt ccctatatta cagcttggag ctaaactctg tttacaaaac
      181 agtatttaca cttgactaat tttgcagatc aaactaatta aatcaattaa actggtgatt
      241 aaccaaatga aggctgattg caaaaattag tgggtttatt ttggaggact ggaagtaagc
      301 taattactgc agtgattact tgaacctgga gtactctaaa tgtggtataa attgaaacct
      361 catagtgaat tagactggga attcattaca gtttaaagca ctgttaatac tattcaggct
      421 gctactcctg tgtgaaaatt tcactcagtg ttttgtatac tgataaacca tcatttagtc
      481 tgtgtccttt taaataacac caagcaaatt cac
//
LOCUS       KCPA01001341             585 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 147540tic ultra-conserved element locus
            uce-3463, sequence.
ACCESSION   KCPA01001341
VERSION     KCPA01001341.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 585)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 585)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="147540tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>585
                     /note="ultra-conserved element locus uce-3463"
BASE COUNT          166 a          105 c          137 g          177 t
ORIGIN      
        1 tggaaggaaa aactcttgga aatgcagcac agtgtagatc ctgttcccta gagaagctgg
       61 gtgcccacag ggctccaatg gggtgagaaa tcctcctgct tccattgctc cggctggagt
      121 gggccctttt cattccacac tggcagttcc ctgtgattga aatttgaaag catgtagctg
      181 ttaatctggg agtgattaaa gagcctcatt tcttggaaga gtcagtactc atcatctgcc
      241 gtgctgaatg agcctctaac atcccctgat cccattatat tgtgattaat tgtgccagtt
      301 taagtcaata attcatttgt taaaaatagg cctgcaaagt atcatttgtc tcaggggaga
      361 tatcagaata aaaaaaaaaa ttcatttgat acttctcatt aaattagtgt tgggagttct
      421 attgaagggt tctgttcatg aaacatttat tgcaggctta tttgataaga agttgtattt
      481 gtctagaatt atgcctgcta acagatgtaa gggcctgctt gttaatgaaa ggatcagtaa
      541 acaagtgcac gacagggggc ctgtggtgac agtaacagag atttg
//
LOCUS       KCPA01001342             391 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 147649tic ultra-conserved element locus
            uce-5130, sequence.
ACCESSION   KCPA01001342
VERSION     KCPA01001342.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 391)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 391)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="147649tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>391
                     /note="ultra-conserved element locus uce-5130"
BASE COUNT           77 a          125 c           46 g          143 t
ORIGIN      
        1 ccctggctgc ctctgcaggc ccagccacag cgtctgtttc aagagccccc aacctttaat
       61 aatcagttct gctgctatct gaacacttcc taattcatcc ccttctgtcc ctgaaaatct
      121 aaatcctatt taagttaatg cccttcattt tcatttataa agacagatac aaaataatta
      181 tttcctatct ctgctgtttc cttatcttct gtcctaataa ttcctcactg tctccctttc
      241 atcatctgtc tgccgtacaa gaaacttttc tgttagttaa aatattctgt gtgttctttt
      301 cctcctcttt catatctcgc tgctcctgcc ctggctcccc cctccccagc ctgcccctgc
      361 ttttcatgct cacccttcct gtttgcattt c
//
LOCUS       KCPA01001343             608 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 147755tic ultra-conserved element locus
            uce-7210, sequence.
ACCESSION   KCPA01001343
VERSION     KCPA01001343.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 608)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 608)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="147755tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>608
                     /note="ultra-conserved element locus uce-7210"
BASE COUNT          185 a          102 c          120 g          201 t
ORIGIN      
        1 aaaaattgca gcataaccct gaaaattgtc ctttgtcgaa gaaaattagc aaaggcctga
       61 actgtgggat ctctctattt ttggctcaag agagaaattc tgaagctgct gatgatttga
      121 aacgggtcct gaagagaagg aaggaaggtt tttttttaac ttacaaaatt gtcttgcctg
      181 tgtaataaca ctgagcatga ctgtcactcc gaagacatat tagctcattt aggtaattag
      241 tgtgagcagc atgtttccct gcttattcca ttcaattata gggtgctcac tttgtcatta
      301 ctggagtatc ttaatgtgac ttgtaattag tgtaattaca atccaatgtt aattatatct
      361 gccacttaga cataatttta tatagtaatg gtcttattct caataacctt attatgttgt
      421 ttattcaaac aggaatttag ccttctttca tgcgtcaaat atggagatta cgtactgcct
      481 gtcatttctg tagttatgac tcggggagct taaaatcata tttggggcaa tcaatgaatg
      541 gagcaaacca aattacaggg ttagagacat gctgaactca cagaaatgat ttgcacagga
      601 ggcccatt
//
LOCUS       KCPA01001344             499 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 147855tic ultra-conserved element locus
            uce-4947, sequence.
ACCESSION   KCPA01001344
VERSION     KCPA01001344.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 499)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 499)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..499
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="147855tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>499
                     /note="ultra-conserved element locus uce-4947"
BASE COUNT          153 a           97 c           80 g          169 t
ORIGIN      
        1 aaaaggaagg atttattttt tgaactgtgt agatttcaat cttgtctgaa aatgcaatct
       61 tcatccattc agtgacacaa gaagttacac tcaaacattt agaaacctgc ctccattccc
      121 attcctcctg tcattatttc atttaatttc atcttttcca acagtttttg agtgtttcag
      181 atagcaatat atcattctgg aataaaagct aatgatccat aaatacttaa tgccatattt
      241 ttatggccag taaattagtc ttaaatgagt tcagtaagtt ctctgacgca tgtcattaat
      301 tgctaatggt gttttaactg gataattgtt gtaaaaggtt gtttatcatc accatttgac
      361 tattcctcgc aatctgtctg gcctggtgct gaacttcccc ttgtgtacag caaagcgacc
      421 aggggactgt gaagcacaat ttaaatatca aattcaaaca catctagtgg acagtgaacc
      481 tacagatcat cagacctag
//
LOCUS       KCPA01001345             491 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 147961tic ultra-conserved element locus
            uce-5147, sequence.
ACCESSION   KCPA01001345
VERSION     KCPA01001345.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 491)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 491)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="147961tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>491
                     /note="ultra-conserved element locus uce-5147"
BASE COUNT          166 a          107 c          118 g          100 t
ORIGIN      
        1 aaaaatcagg tttaggtgct gagctgttac aaagaggagt tcacttggca tttggacagt
       61 gttaaaactt tttaatgtgg atgctagtgc agaacccagg gattaaagag acgcacagct
      121 cccacatgca ggaaaaggag gttggcacag cagcccgcgc tcgcccatca ccgcgggaag
      181 ggacaggcat agcaaccaca agcccaaaag cagaaaagcg cataccttca gcttggaatg
      241 aaaatcacga gatttccttc tggcaagaac ctgaatgtga ctagacacct gcagggtagg
      301 ggaagggagg aaacaaagga aaagcctgta accatggaga tgaaaagccc cctacaactg
      361 ggcaagccaa acgtacctta atggcggctt gaatttctcg aactttcttt cttgctaaga
      421 cctgtatgtg actagacacc tacattgttc aggtttataa caacaaacaa aagaaaaagc
      481 aaatcaaatt t
//
LOCUS       KCPA01001346             730 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 148074tic ultra-conserved element locus
            uce-4098, sequence.
ACCESSION   KCPA01001346
VERSION     KCPA01001346.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 730)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 730)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..730
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="148074tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>730
                     /note="ultra-conserved element locus uce-4098"
BASE COUNT          211 a          135 c          126 g          258 t
ORIGIN      
        1 agcaacgaaa ttttacgaac aacctgctgc ttcctactct gtataaagaa gatccttgtt
       61 gattccactt tttaggcatc taagagctgt aaggataagc attctataaa tatacgtagg
      121 tacttatatc atgcatacta gaataactgc attccctaag ttatctcaac aacttaaatg
      181 ccacgactat ctttggcttc attacattgt tgcaccacga gaaaactata gctggcatgt
      241 gaattacttt gcttctctct ctctctattc tcctaggcct agtagatgct gcaatcgatg
      301 cagcttccca agcaggtgtg tttgtatgtt gcatggccaa tctgtaactg ggtggaagac
      361 ttacatgtac tgacattgtt aatcaggatt attgggcttt tggcttactg acgttacttg
      421 taattcttac tggcctgcag ctttgatgtt gcatttcatg ctcagttcta cattttgcta
      481 acatttctta taatttctaa acataataag caaattcatc aataaccatc atcttattca
      541 cctacgaatt atggttactt agatggtatt tgagagtttt tgtagtattt ccaaatacag
      601 ctgagtcatt cacttgataa ttaaacatct tattatattg gtatataatg gttacctaga
      661 aatgagaatt ggttaaatac gatgtaagat gatggtgcct gaaggatctt tcttctctag
      721 tgaaagtaaa
//
LOCUS       KCPA01001347             647 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 148185tic ultra-conserved element locus
            uce-4509, sequence.
ACCESSION   KCPA01001347
VERSION     KCPA01001347.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 647)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 647)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..647
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="148185tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>647
                     /note="ultra-conserved element locus uce-4509"
BASE COUNT          113 a          151 c          140 g          243 t
ORIGIN      
        1 tttttttaag gaactgttta gaatcatctc cctgcaataa ttggttactt ttgctaggat
       61 ttggctttcc tatagattgc aactttgggt tatgtcctgg agagtagcag tgcaaacttg
      121 gcctcgtgtc tggaggtgct ggtatattgt ctctgtactc cttggttttg agacttactc
      181 ttgtgtgtcg tgattgcatt tcacccttcc aacttcaagt tgctaacatc ttgtagtggt
      241 gttctgtctc ttctcctctc ctttctctgt tctccccgtt cttgttttct cacaggctgt
      301 gcgaagttta actgtgcatc tgagagagtg accttcaagc ctggtggcag gaggacccga
      361 tttctgagta cgccctgctt ggctctttgt gtgtaacacc tttactcctt ccttgtctgt
      421 tccgtttcgt ctttttgttt ctgctgcttg gatctgtttc atgcagccca cctcatctgc
      481 caccttgtag ctcagctcag ctgctcttag cacaccttta gaagtttggg ttctcgtgtt
      541 aggtgttctc tgctgttgaa ctcactgtct cattttcctg cctttagagg aaactttaaa
      601 tgacacaaag agagttagca acgtgagact tatctctcta gtggaag
//
LOCUS       KCPA01001348             571 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 148293tic ultra-conserved element locus
            uce-5704, sequence.
ACCESSION   KCPA01001348
VERSION     KCPA01001348.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 571)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 571)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..571
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="148293tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>571
                     /note="ultra-conserved element locus uce-5704"
BASE COUNT          152 a          110 c           99 g          210 t
ORIGIN      
        1 tttgctgttt cccttattta catatcacat aaagttactt tttagattga tcttttcaga
       61 aatcttcccg ggctaggtgt cattaaaagt tatttcttta aaggtttgtg cccgggtagg
      121 gcatttacct gcctcactgc tgatattcta aaaatacctc catgtccata ctattatcca
      181 ttcttcacgt ccaattgctc tgttatggta atagtcagaa gcacaccatg tagtaattac
      241 ttacagctga cttaagaaaa gaatattcaa ctcccccact gttccactag aaggtcttta
      301 tgcactatta actcattcct gtttattaat actctactgg taattctggc tgctgctttt
      361 taggtttgta ataggaggac tattaaacag caattattga ccatatgggt tagtggatat
      421 ttgtggtggt tgttgggtgg ttgtttttta tgcttttatt tttaaggagc cacatcacaa
      481 tatagtggtg caactttaca tctgcctggg attaacaatt ttggcagcat tccccgccta
      541 gaaaatgcaa attccatatt tcagaaatat c
//
LOCUS       KCPA01001349             553 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 148402tic ultra-conserved element locus
            uce-5289, sequence.
ACCESSION   KCPA01001349
VERSION     KCPA01001349.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 553)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 553)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..553
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="148402tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>553
                     /note="ultra-conserved element locus uce-5289"
BASE COUNT          183 a          101 c          115 g          154 t
ORIGIN      
        1 atcaaggaca acatttctaa aaactgtttg gcctggtgta tctgtgttag ctcatactac
       61 tgttacttca gaaaattttt ggtattctgc tcaaaactat ttccttagtc aagtgaagat
      121 atcaaccaga cagaattagt atctaattac ataccttgct atgtgcataa actacagaac
      181 ctaataattt ccaagtgcct cctcttcggt ccatgcgcac catacgaagg atctgtagga
      241 aacgaagact tctcagtgct gatgttgcaa aaatgttacc ttgagttttt gcagaaacaa
      301 ctgctattga agcgatgaga acaatgatgt ctgaaagaaa tacattacag aaagcattaa
      361 ttatcagtaa atagtacata catctacatg agctgacaga gaaggacagt ggatgggaat
      421 ccaaaacaca gagattcctg tttgagtagg atgtgagatc agggctggtg tcaaaaacta
      481 cctcgggagt ctccaggagc agtgttgaag gaacctcatg taggagcttt gaaacttgat
      541 gtagcaaact gta
//
LOCUS       KCPA01001350             457 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 148510tic ultra-conserved element locus
            uce-4845, sequence.
ACCESSION   KCPA01001350
VERSION     KCPA01001350.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 457)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 457)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..457
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="148510tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>457
                     /note="ultra-conserved element locus uce-4845"
BASE COUNT          130 a           81 c           73 g          173 t
ORIGIN      
        1 tcagtagttg cttctataaa caattacatc catgtaaaaa gctttatgat tttattttca
       61 tcattgacag gctgagctgt gtagctgtca tactttgcag tcttccctcc agtgacaacc
      121 acattgacaa catgttatac tccacattga ttttacagtt aaggagctga ttgtgatata
      181 tagggatttt aagaattcag ctgagaggat gacttttgcc ttttatcatt ccattaaaat
      241 tttataacca tctttttcat gtcatttcat ccatgaattc ttactttaga aagtgatagc
      301 tactgctgcg agcataactt ttttcatgtt cagagctttt tattgtatta gcaaactatc
      361 ccaattatag ttaatactcg tgttttacat aattgtggtg accctttcaa ccaagcagta
      421 tcgtgctagt tgatttgtac atagaattag atgagtc
//
LOCUS       KCPA01001351             699 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 148622tic ultra-conserved element locus
            uce-3430, sequence.
ACCESSION   KCPA01001351
VERSION     KCPA01001351.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 699)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 699)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..699
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="148622tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>699
                     /note="ultra-conserved element locus uce-3430"
BASE COUNT          205 a          149 c          113 g          232 t
ORIGIN      
        1 atgaatggga tttgctcatt ttagtttatt atcttcatct gtttctctcc actaaagaag
       61 agagaaaagt cccactcatc ctcctgccct cccctcacag agaaagtggc aattgtacca
      121 ttaagcatgg agtgctttac atatgcaaac acaaacacag tgcagatctt tcctatccat
      181 atgttcatct cctttccttt acctaaacca gacgattacc tcagcaactc agctgtgtta
      241 ttgagacatt tcagcgtgaa atttgttttt cctcactgaa ctttaagcgg aatttcaagt
      301 gccaagtctc caaagccaag tggggctatt aagagataat tactaattat gctaatttga
      361 gaagttgtgc tatttctttc cctggtcatt ttatctgcag ctctcctgag agaacagtcc
      421 ccattcaatg ttaataacct ttccaggcta agcattcaat agaggacagt gtgtcctaaa
      481 cccaggaata ttttacagtt aatctagata tgtgcctgta aattagaaag agaagcaagt
      541 tgcactaatg ctaatgactt atgttattaa ttttttagca gaaatatctg attcctctcc
      601 attcatatat tgatatagct gatggtttta gagtcctcag tgacttgaaa tattcagcat
      661 gccaacaata tttctcagtg atcattttct aatcctacc
//
LOCUS       KCPA01001352             627 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 148732tic ultra-conserved element locus
            uce-5955, sequence.
ACCESSION   KCPA01001352
VERSION     KCPA01001352.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 627)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 627)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="148732tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>627
                     /note="ultra-conserved element locus uce-5955"
BASE COUNT          200 a          120 c           79 g          228 t
ORIGIN      
        1 tttaatgtga attttaaaag acttcacaac tttaatttac cttaattgtt gaagcttcaa
       61 actaaaattg gcaagatctg cttcttagca ttccatccaa acaaaatgtc ggtgttgata
      121 aaatccactt ttaaaaacat gtatccctgc caatcttaag tactgtcatc tcatcaccct
      181 gttggagttt gattgattat gccttttcct tatgttcatt aatctcatca ccttatcttt
      241 tacaccactt cattttagca gaaaggcaat aataaaaccc tcatccatta tccttttacg
      301 catctagtca agcggaaatg gttaataaca tgatacaaat tgaacttaaa tcacctcatt
      361 ttctcttttg tcgaatgcac attaaagtat attccaaaag tgcaatttgt tttacagggg
      421 aatttgtgtt atattgctac agacaactaa aattaagtgt ttctcagttt ggttattaaa
      481 tatatccaac tgtcctttta tctctgatac taaaacatta actcatttta ttagggtgta
      541 ataatacaag aaccttatct cccagaacac agagacatct agtctgccta atagtaagtg
      601 ttatacaatg ggtcatttat ctttttc
//
LOCUS       KCPA01001353             555 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 148841tic ultra-conserved element locus
            uce-7415, sequence.
ACCESSION   KCPA01001353
VERSION     KCPA01001353.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 555)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 555)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="148841tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>555
                     /note="ultra-conserved element locus uce-7415"
BASE COUNT          187 a           87 c          113 g          168 t
ORIGIN      
        1 tttttttttt aaggtttcta cttaaagttc tgtgccaaag ctacagtact tatacatttt
       61 ctaaatgtgt tttaagcaat aagttgtaca acatttttag aacatgtgtt aagctatttc
      121 tctaagaatg aagctcttaa caaaacataa gcactctgca tgagatctta gcagcaaagt
      181 gcttaaaaga taaagtaaga attggtacca tgggaagaac accagctgta gagcacacag
      241 gtccattatg agaagtatgg tagtgggtag ggagaaaatg atttaatcag gagtaaaacc
      301 aattttatta taagggcacg cagggggtgt ggcaccatag tgagagggac atttcaaaat
      361 atctgacaga tttcaacaat gtgaaaaccc accctgttct ttaaagtgac agtaaacccc
      421 atcaggtctc tctttttgat gctattgtta acagttgact gtttaaagct ggcctgctaa
      481 gatgctgtcg atctagttca atagtgtgtg gcaaaataaa aggctaattg ttgaaatacg
      541 atcaatcaaa tatga
//
LOCUS       KCPA01001354             756 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 148951tic ultra-conserved element locus
            uce-6138, sequence.
ACCESSION   KCPA01001354
VERSION     KCPA01001354.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 756)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 756)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..756
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="148951tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>756
                     /note="ultra-conserved element locus uce-6138"
BASE COUNT          190 a          194 c          164 g          208 t
ORIGIN      
        1 tcctcctcct ccttttcctc actccttttt tctttcctgg ggcaaccatc ctgctagcca
       61 tttcttctgt gaagaaggca ttccactgtt ggatgcgtcc cagacacctg aattgataaa
      121 acaacctgcc ccaggatgca gagggcttca tttcggatca taagaaaggt tatctttctt
      181 ctacaatggg gtcaatctgg gtggcggggg ggaaacccaa acaaacccac ccgtgcgaag
      241 actgctcctg cctgtgaaaa gcgtgcttgc atccactgga aagaaaaggc tggagccccg
      301 ctgtgggctg tttgtatgat tgtttctttc cacagctgtg tttttttgaa ctgctcttcc
      361 tgtgttctgt tatagaatag tcttacagga accaatcatt agcgctaaaa tacctcaggt
      421 aggagtgcca gtgtgacctg ccaaccaatc agattgtgga ttgcagtgga aaaaactgaa
      481 ttatactaac cattccagca ccacattaga gatgggaaca gaggcttttt cagaccagtg
      541 cagactcaag tgtgagccaa gcccccgctg tagcagggtg gcgtgtgtcc agatttcata
      601 ccaagtggca tttcactcaa aataaaaacc aactttaatt cagaacaagg tcatgcttgt
      661 cccattacca tgtagaagca cctgctgcaa tggacaccgt tgtcctgtca cctcttctaa
      721 ttcattcatg ctcattcctg gtgcacgtat gccacc
//
LOCUS       KCPA01001355             752 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 149057tic ultra-conserved element locus
            uce-1014, sequence.
ACCESSION   KCPA01001355
VERSION     KCPA01001355.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 752)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 752)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..752
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="149057tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>752
                     /note="ultra-conserved element locus uce-1014"
BASE COUNT          245 a          132 c          138 g          237 t
ORIGIN      
        1 aaatggtaga agaaaataca gttctactca tgtttttatt ggagttcatc agccactagc
       61 cttttataac ttatttggtt gttttagaaa atttcttcac tgcattaacc acattttctt
      121 taggataaga tcaacaccca aggctaaatt taaatctcag gaaaggtaaa agaatcttta
      181 atttatgaaa ctgaacaagt agacttatct aaacatctct agggctttaa tggaggatat
      241 ctataattct ctgaattgta ttcctttcac agtgatattt tgtaattcca ttctattacc
      301 cttgcttaac attaatgaga taaaaagatc acattatggc gattgatgtt cttcaaatta
      361 aatgcacgtt tccatgtaca aagctgtctg ctaatttaaa aaacatagca tgtaacatag
      421 aatcatgacc atggtcatca ctcagctggg atcagatagc atttttatct attcattgga
      481 tttaacaagg catgagatgg aaacagaata caaagtgtgg gtagattatc ccgtattccc
      541 ccttttggcc acttcttggc aatctcagca aggaaactga ggcttcatgt tgccatggaa
      601 ataaacctca aggtcaaagg ggcatatgga aggtcaggca atgacaaagg aacatctgag
      661 aggccatctg gatgagtgac ctgacataat tagtcattaa tcccactctt gggaacaata
      721 gagtttgccg agaatgtgtt tggactttga tc
//
LOCUS       KCPA01001356             365 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 149159tic ultra-conserved element locus
            uce-4118, sequence.
ACCESSION   KCPA01001356
VERSION     KCPA01001356.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 365)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 365)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="149159tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>365
                     /note="ultra-conserved element locus uce-4118"
BASE COUNT          112 a           67 c           79 g          107 t
ORIGIN      
        1 atccggtcgc ctactttcag ctttccacag cggtctgcgg ggctcccttc aattatccga
       61 cctattttgt gaggcatggc cacacatgca tttcccgctt ttgtattggt tgtttacgta
      121 tgtgggaata tggtgaaggg gaaaaggaaa aaaagggttg aaaagggaaa gagaaggtta
      181 agggttaatt aattaatgca tcaagcaaaa gttattatag gatagctttg ctgccagtgt
      241 tcaaaacatt ggcaatcaac tagttgagtg cacaaacttc ttccacaaaa attttgttaa
      301 tccctcaagt ggatttctgt taataaacag tttagcagct ccatcataac ccaaataaag
      361 aattg
//
LOCUS       KCPA01001357             684 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 149265tic ultra-conserved element locus
            uce-7016, sequence.
ACCESSION   KCPA01001357
VERSION     KCPA01001357.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 684)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 684)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="149265tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>684
                     /note="ultra-conserved element locus uce-7016"
BASE COUNT          214 a          127 c          118 g          225 t
ORIGIN      
        1 tttatattca gcaaattaaa tggccttgtc taactttaaa tcaccagtaa tttgtcagta
       61 aatcaccttt tagtacaagt taagcaagga atggagtata agcagtagaa agtacagaga
      121 tgtagctaca ttaattcatc acaaagaaaa gtaatgcagt taatattcat ctatcatttg
      181 gcctctctgc ctagtattct catggagatg ataaaaaaaa tgattgagca ttcaggattt
      241 tctttactat tacattcaaa tatatttttg ttgattgatt actaaaatca ttatgaattc
      301 tgtttttacc tagaagaatc tttgctatta cttgtatttg gccctttaaa aagcgcagac
      361 tgaacaagac cagttaaact ggcaatctgt ttctccatgg cttgtatcct ctctctgtaa
      421 gacaagagaa ccgttcgtta aagccagata tatttgcttt cagacttgct aggtgaacga
      481 ttaccacagg attggaaaga cactacagag tttgtgcaaa ggcccttggg taccagtttg
      541 catatacctt attgcagcag ctcaccacat ctcggtttgg acagctttca caagacaggc
      601 acctaaaaca atttgttaat gcctcttgga actagtgatt ttcagtatta catgcatttt
      661 acctacactg ggccaatcgt tttg
//
LOCUS       KCPA01001358             415 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 149369tic ultra-conserved element locus
            uce-5226, sequence.
ACCESSION   KCPA01001358
VERSION     KCPA01001358.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 415)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 415)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..415
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="149369tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>415
                     /note="ultra-conserved element locus uce-5226"
BASE COUNT          149 a           66 c           72 g          128 t
ORIGIN      
        1 aaaactggaa taaacccaac ataaatgctt actattggtg aatataaggg catacaaaac
       61 agggcagtaa agtcactata caatatcagt aaaaccatta aaaaaatctg gaaaagcatc
      121 aagatggctg gcctctttgt agtttcagca cagttgagcc ttatttctaa atattttccc
      181 aagtgggaaa taacagcttg aaaataatcc cagatgtatt catttgtgca acatttttct
      241 gcttgcaaca tataggcatg gaaaaattat tgaaggtttc aattctggac ttgtatttta
      301 aaaatgtcaa gcttttgaaa aacagcataa tttttcctta aaagctattc atttacctgg
      361 aatgttggcc agcaggcgta cattatggac ttggtttagc taagattgaa aaatt
//
LOCUS       KCPA01001359             598 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 149479tic ultra-conserved element locus
            uce-6762, sequence.
ACCESSION   KCPA01001359
VERSION     KCPA01001359.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 598)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 598)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..598
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="149479tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>598
                     /note="ultra-conserved element locus uce-6762"
BASE COUNT          153 a          122 c          125 g          198 t
ORIGIN      
        1 aattattgaa atgctttatg gctagagtga aaatgatctg ttctctcata cctcttaaaa
       61 agagactttt ttttatgtgc ctttaaagtt actagttgtt atggacacct gaggagttca
      121 tgggtttctg tgacctttta ctgtggacct gtttccagtc aattcatgtt ttcctcatag
      181 ccagacagct gtttattatc gtgtcttctc gcattctcta caatattttc tactgagacc
      241 tcgagcagct tgttagtggg aagtaaatat tgatttggca tcctgtcaat gcagaaagaa
      301 tgaaaaaatt tccaccagag gcccctcaaa cattttccta tcgacatttt ctgggcagag
      361 aggaaagctg catagaggat gacaagtctg agactagcag aaatccctga ggggtccatt
      421 gagactgctg ctgtgacctg tgtgatactt tttcttctct ttcaagtctt taatacacac
      481 agagtctgct gggatgctcc cctcttgtaa gtgatcaagg gcagtttatt ggcaggtgag
      541 agcccagctt ttctagccat agtcagcttt tgtttggaca tcactgacaa catacact
//
LOCUS       KCPA01001360             680 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 149588tic ultra-conserved element locus
            uce-175, sequence.
ACCESSION   KCPA01001360
VERSION     KCPA01001360.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 680)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 680)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..680
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="149588tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>680
                     /note="ultra-conserved element locus uce-175"
BASE COUNT          233 a          126 c          103 g          218 t
ORIGIN      
        1 aattaaatga ttcattaggc ttaatgaaca atgctgatca aatcatctct aaaataaagt
       61 cagccgacat tgatatatac atagtttaac ttgttcttcc caactttatt aggtacatat
      121 gtctacagca gacacaaatg gaacattcta caactaggct ccaagccaaa aactaattta
      181 ttctttaatg tggtagtgat tacttggtgg ttccttgagc agagatgaca ggtctgagct
      241 aatggagttg tactgtaagt taatataaat catgacagag caattaatta cagaaaccac
      301 tgtaaatccc tttgttagtt ttccccatca ccagaaggat ttaataatgt tcattttgct
      361 aagttccagt gacatttaca agtctaaaac catttttaat caaatcaata tctctggctg
      421 ctaaatttag ttgtgctttg ctagcaagtc ctggaatgca tgatactaat gtttcctacc
      481 ttctgttcaa gtaaattgta ctgaagccct gcacttcctc tgcatttttt acattgagtt
      541 attcttaatg agcaacataa gaaataagtg cacccaaagg aatttgagtt agacagatat
      601 acaaatatca atgctcatga tgcatctcaa attcaatgaa atttccctta attagaagaa
      661 aacactccaa accaaagaac
//
LOCUS       KCPA01001361             654 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 149697tic ultra-conserved element locus
            uce-7453, sequence.
ACCESSION   KCPA01001361
VERSION     KCPA01001361.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 654)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 654)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..654
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="149697tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>654
                     /note="ultra-conserved element locus uce-7453"
BASE COUNT          210 a          121 c          152 g          171 t
ORIGIN      
        1 tagataaaca ggtacacagc aaactttcat ttaatttatg aatggagcaa gatgagatct
       61 ctttacaaca tcaggcttga aggaacattc cacagaaatg ggcacatgca gcggagtaag
      121 ttttggtgcc aagcacacca atggagctga ggttatgaac agttttaaca caggtttatg
      181 agcagagaag gaagaaaagg agccaaagaa aaagagacag aatatgatga cttggaacat
      241 ctgacctgtt agttggtcgt cgcctgcagc aggggcgatg cgaatgtatg gtgttgtaag
      301 ctgagtcacg attatcgcag ctaaggcaaa ggaagagttc caggtcagca tgcatgaggg
      361 aaaaaaaagc cagactgaag ctacgccagc aagaagaatc ttggtcagtc gtttattgtc
      421 tgaacttcac aaatcaaaac caaactccca caagttcctt ttcatcttca gttgttagtg
      481 tggttattct gcaataatga gctgtcgttt caggaaaagg actcactgca tttgagggaa
      541 ctggagactc tttggctctg ctagtcatgg cactaagctt tctaagagaa aacagctaat
      601 tattgattac gccatgaact tctccaattt cagctagttt caattttcat attt
//
LOCUS       KCPA01001362             467 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 149806tic ultra-conserved element locus
            uce-1050, sequence.
ACCESSION   KCPA01001362
VERSION     KCPA01001362.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 467)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 467)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="149806tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>467
                     /note="ultra-conserved element locus uce-1050"
BASE COUNT          156 a           79 c           94 g          138 t
ORIGIN      
        1 tttactacac atttatattg cagagtaatc aataaattat tatttcaata tttattggaa
       61 tctcagaata agaaagaaga cagattacac aaatccatct tagttgatta atggctactc
      121 cagcaaaagg catacactga tggagtgggt cagtatgcag actatattac tgaatatttc
      181 agctcggttg taaatatagt atctgtttct cttagggact gtcacactga gtgcagtata
      241 aaaggcaata aatttcaaca gattaattaa ctctttggtt actggggctg tgtgtcacct
      301 atcctggcac ctaataaaaa atcctttaat gccaagacat aaagaagggc ctctttgaaa
      361 atgagttatt aacagcattt cgtgaataga tggagaaatt gtagcccagc catttaagtg
      421 tcataaagtg cagcaaaggc tgctggaggc ctctgaggga cgccagg
//
LOCUS       KCPA01001363             506 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 149919tic ultra-conserved element locus
            uce-366, sequence.
ACCESSION   KCPA01001363
VERSION     KCPA01001363.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 506)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 506)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="149919tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>506
                     /note="ultra-conserved element locus uce-366"
BASE COUNT          143 a           94 c           92 g          177 t
ORIGIN      
        1 aagtcttacc aagtcaaatt ctttcatttc tgctcctgtc atttattaag ttctcctttt
       61 aatagcccat gtgtatgtgc aagtttgact ccaggtgcgc aatcttgaaa tcttaatatg
      121 caactttttt ataaacaata caaagaagtt gacaggtctc aaaggggctt gtgtgaaaag
      181 ataattaagt gctttagaga gtgtcaagag tcaatagctc agcactgtca gcattctcga
      241 gtgttacagg ctataattag atggcatgga ggtgtaagag atgtttggca gtttattcca
      301 gcatgatctt gagagtaaag agctgccttg acactatgag tgaggaacat taaaacctca
      361 cactctttta atgacttaga caaattgctc ctttgtggag gtgccactct tcgcaatatt
      421 ttcatctatc taccttatct cccaaatttc cattgtgaca tcactggtac ttttgctttt
      481 tattcttgat ttattaaatt acttca
//
LOCUS       KCPA01001364             594 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 150031tic ultra-conserved element locus
            uce-1540, sequence.
ACCESSION   KCPA01001364
VERSION     KCPA01001364.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 594)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 594)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="150031tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>594
                     /note="ultra-conserved element locus uce-1540"
BASE COUNT          195 a          134 c           98 g          167 t
ORIGIN      
        1 agtggaaata ggtgacaaaa tgttaaaaat aaaccttcat gtgtgaccac aaagagtttg
       61 ttaccattaa acacagggaa catctgtctg tcttccacaa acaacacaag gatgtagacg
      121 ttacagaaat acagttgcat ttcacctggc agtttgatgc agcgcacttg cacatgacaa
      181 cacattgatt ttacttctac ctccatgcag acatctacgt aaagaaatcc attaggcaga
      241 cagttctcat ctctattgac tgacagagtg acaatcgaat acttttcacc ttccaaactg
      301 actgacagct agacacttaa acaagccttc aagttgcaat aatagtatga aacactttca
      361 attacctgaa tcaaacaaat ccatgatccc actagttgaa tgtatttttc tgtctgctgc
      421 tatgcctggc ttggtttaca ctgttgtttg ggcaattcag agtgctgcaa acaaacagca
      481 gcccagggtt tctaaacaat gaattatacc tcaagtagca cacatcttta caaatgcagc
      541 cagcctttga aatcgcttcc tttttagcct agtaatgaag caaatctctt aaac
//
LOCUS       KCPA01001365             660 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 150137tic ultra-conserved element locus
            uce-5521, sequence.
ACCESSION   KCPA01001365
VERSION     KCPA01001365.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 660)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 660)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="150137tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>660
                     /note="ultra-conserved element locus uce-5521"
BASE COUNT          211 a          131 c          137 g          181 t
ORIGIN      
        1 atgcagatgt gcaaaaagga catcccggca cctcaatttc aagttcagct acaaaaaact
       61 ctaactccga acagtgattt aaaaagcaac caccgaacca aaaagtgttc agcttttgca
      121 agaagtctag gggaaaagaa aagagcagaa tctttccttc caagggagga ttgtgaattg
      181 tctcccaact gcactcctga gcgtgaatca attttcttcc agtcgataac tagcgcaaag
      241 gttctaacct tcatttgtgc tccaaatact caatcgggga tgtagaacac ataccaatta
      301 agcaattcag ctaaaataag aaggccgtga accaacatcg ttgctgcagc tgcccctgag
      361 ggatcgaggg ttagcagctt ggggaaaagg taatttattg agcttaatac tctgcgaaat
      421 gttctcatga taataagatt gtaagatcgt tttaatatct gaagtcatgt tgaaaaggtc
      481 atttctcact ttttacgcct acctaagtca tgtaaattag agctactcaa acagagttga
      541 ggatgtttgc agcctaagtt tttcttttgg atgacagaga atgtcagtaa tcccatgtgg
      601 tggacccatg agttttagaa tagcaacagt aatgaagctg tgcattcatc tttgacctag
//
LOCUS       KCPA01001366             689 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 150245tic ultra-conserved element locus
            uce-2293, sequence.
ACCESSION   KCPA01001366
VERSION     KCPA01001366.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 689)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 689)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..689
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="150245tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>689
                     /note="ultra-conserved element locus uce-2293"
BASE COUNT          225 a          128 c          140 g          196 t
ORIGIN      
        1 atcagggtag ttccctactc ctaagcacaa ctaaggagat caacatagtg atggtgtcca
       61 aaacttgaaa atatatgaat tactgtttaa aggctaagtt ttattctcta aattagcaca
      121 gtaaaggcta tggaagagta tttttggaaa ttatttatga aatgtagatg ggtcttcaat
      181 tgggaatagg gctggacaaa atgttagtgg ttctttgttc ttgcagctgg cctgttgaat
      241 tacacagagc cagcacagta aataattcta ctattgtctg cctgtgtcag agacagacag
      301 aaggtacatt tggacttggt ccaaacacca caagggccac tcatagccac agtgtccaat
      361 tactgcttgc ttgactataa aatgcacttt ttttgcagct aatttaagaa tggcagcttt
      421 taatggggtt tgtattaaaa gggggctgct gctctggcgt ttgcctgcgt tctactctgt
      481 acaggaagca acaaacacat acacagtgaa aataatcaga gtgtgatagc attagcacag
      541 caataacaac agtgatagca aagtcaatgc tttgcaaaaa aaaaaaatca agcccatctg
      601 gaaacagccc tcaactagat tatctcaaat gatgaaacaa gtgcatccac tcagtttctg
      661 cagatgtgca catattgcaa aacttttct
//
LOCUS       KCPA01001367             642 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 150355tic ultra-conserved element locus
            uce-88, sequence.
ACCESSION   KCPA01001367
VERSION     KCPA01001367.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 642)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 642)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="150355tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>642
                     /note="ultra-conserved element locus uce-88"
BASE COUNT          185 a          137 c          116 g          204 t
ORIGIN      
        1 gctcagttcc ttcaaggatg ctgctgctgt ctccgggatc cccactctcc cagttgtgat
       61 ttcaccttct ccccatcacc tcacttgtgg cttgtgagca gcagatcagt cccacaagac
      121 agatcagttc tttctgtcac actgctgctt tgtaatttag gatgatcagg ccacctcagg
      181 gtggaccaga gatttgatag caccctagtc aaaggcaagt gcagcatgta cagagcagca
      241 aatgaagtct tctctgagcc aactgttcca cctggacccc gctacaaatt attgttttca
      301 attaccacct gtgtactcct tcccatgcaa cttattgatg taaaattaca acaacactgg
      361 tataaataag ttatgctgtg gttgtaaaat ggaagaaatt ttgttgtagc aattatgttc
      421 agcaagatga caaaataaat ttccagtgct gtgcttgcag taacctgggg aatttaaacc
      481 tcataatttc cattcatttc agataatttg gagtaatttc tatatgtaat aactttgtaa
      541 tgaaaaacac agcggtactg aagtgatttc aactcttttt ttttcctatg gtatacatgg
      601 cacaaaataa ataataaaaa taatatttcc tttttgtatg tg
//
LOCUS       KCPA01001368             643 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 150464tic ultra-conserved element locus
            uce-6620, sequence.
ACCESSION   KCPA01001368
VERSION     KCPA01001368.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 643)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 643)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..643
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="150464tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>643
                     /note="ultra-conserved element locus uce-6620"
BASE COUNT          199 a          145 c          122 g          177 t
ORIGIN      
        1 tttaaagcaa cttaatatgt ttctaacctc agcttagccc ctcgctcaac acagttaaac
       61 atctacaaac caccacacca atttttcatc tttcaccttg gcttctactt ttaaaatata
      121 tttaacagga agcctctcag gctatttgga aaggaaaaag ggaaaataaa ttgaagacaa
      181 ttttacaggt cctacttcag ctaaaccttt cagggccttc aatgagaaga taatctttct
      241 gtgattatgg ccaaaccctc tcgttgcttg gcaacacata attaaggaat atgttttcag
      301 atccgctttg caagctggcc attatcagat gaaattactg gagcaacaaa tgtcatcctc
      361 atgcaaatga gatggtcgta ggcaaaaaaa gacagcacag aaatgctgct ggcttcctct
      421 tgctgtgcac cggtaattct ggtcaaggga agggataatt taagattttt agagaacagg
      481 gtttgcagtt taaacaggga aggagggctc ctaacccctg tgctctggag gtcctttagc
      541 ccagagctgt cactgcgtcg gcatcgaccg ctcaatcaga cacagcgcaa ataaatgaac
      601 atatttgtgt tccccacatt atgccaatct aaaaatactg cct
//
LOCUS       KCPA01001369             400 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 150566tic ultra-conserved element locus
            uce-3968, sequence.
ACCESSION   KCPA01001369
VERSION     KCPA01001369.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 400)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 400)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="150566tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>400
                     /note="ultra-conserved element locus uce-3968"
BASE COUNT          135 a           82 c           82 g          101 t
ORIGIN      
        1 gggacaacca gttccaactg agctgccgag cagagcattt gtcctcgaag acactccctc
       61 gcagagttca aagccaggcc tgtgtgaccg tgaggcacag cttaccacag agttcctggt
      121 aataaactct atttgaagac tcccagtgaa aagtgtgttc ctaatagagg ataacatttc
      181 atggtcatta tgcgatacac ttaactttaa aaggaacaaa aatgctgaga aagtaatttt
      241 ctgaaaagga ctctcagatt tcattactat gggtcaagtg cctggggaga agaattaaag
      301 aaaaacacga acttgtgcac aaattaatta aagatatttc cactaataaa ttgtccccat
      361 atcccaaggc agagccttca gtttgcaaaa tgtggtaata
//
LOCUS       KCPA01001370             835 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 150676tic ultra-conserved element locus
            uce-7168, sequence.
ACCESSION   KCPA01001370
VERSION     KCPA01001370.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 835)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 835)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..835
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="150676tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>835
                     /note="ultra-conserved element locus uce-7168"
BASE COUNT          223 a          186 c          215 g          211 t
ORIGIN      
        1 ttgacagccc aagattttcc agtgggcaac ttgcaacttg acaaagtctt cagaaactcc
       61 ttccgggtgg tggggcagga aggaagtgtg gcagtacagc tttgtccacc gtgcactttt
      121 tcagccctgt cctttctcaa tacccaggaa agattaactc ctcttcgcac accagagaaa
      181 gttattatca ttaatgaaga atttaaaaag agtgattaat aaagggtcct tatctggcca
      241 tgaggaggag gctggacaat ggaagggaga aaatgaaaaa caataaatat gaagcgtaaa
      301 aggaggcgag cactgctccc acttgttaga tcgcagctgc atctcctgag gggggaaggc
      361 tccaaattgc taattactgc ctctgaaaag acctcgctct gatatgtttt ctgctaaaag
      421 gttcccatta atgaagcagc gatgatgccg tttccctttg acttgccttc aattccctcc
      481 ctgagcttcc tcccaagccg ggaacaatga ggccctggga gctggcggct cccacaggcc
      541 tctcggagac taggccgggg gcagctgagt gaggggagcc gagccggctg tgaaatatgg
      601 aggggggaga taaggcaaag acagaggaaa gaggctcact cccaggagcc cagggaaaat
      661 ttgcagttat tatgaaggag atgagacaga ttaaaagccc ttgtgttctg tgctgccctt
      721 ttatttagtg gcttcatctc tgagatgaaa gaagttggaa atgactttct ccgcattttg
      781 ctgcaagaag cttcacggca cattttttga ctttattcct ccctttgtct cttgt
//
LOCUS       KCPA01001371             632 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 150782tic ultra-conserved element locus
            uce-919, sequence.
ACCESSION   KCPA01001371
VERSION     KCPA01001371.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 632)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 632)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..632
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="150782tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>632
                     /note="ultra-conserved element locus uce-919"
BASE COUNT          163 a          131 c          148 g          190 t
ORIGIN      
        1 gaactttttc atgacatatg agcacggaga ggcagcaaat cacttgggtt cagacaatgg
       61 aatcccacct aaacaataga tgtttaagta gaaagtgttc cagctccttc tgacaaagag
      121 cctccagagg attacaatgc agtcaatgtt gctttaatta aatttaatgc tgtgtgaaat
      181 gcactctgag aaactttgat gaatgactgg ggcaattcat gtggctcact aaagggcatc
      241 cagctcttgc aggggtgtca aaccacgatg aattggttag tacaggcatg tttatagact
      301 gcctaaggaa ccttgtatct gtgtggcaat gtcagagata atgttatgat tctctggacc
      361 ttggggggct ttggtgacat ggttaatgag atagcccagg gagtgtccca gtgggttact
      421 tgcagacctc ccacatcaaa aggagcagct ttgccccttc agagcctgcc gtcctctcga
      481 tctctcagct ggcccatgct ttccgtaggg ccactttttt tggtttttag tcaacattaa
      541 ctttggctgc tgaaattcag aagtggttag tttttaattt ggtttctctt tgacccaccc
      601 acacaatggc tttcaaagtt ttttatagga gc
//
LOCUS       KCPA01001372             672 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 150893tic ultra-conserved element locus
            uce-4954, sequence.
ACCESSION   KCPA01001372
VERSION     KCPA01001372.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 672)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 672)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="150893tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>672
                     /note="ultra-conserved element locus uce-4954"
BASE COUNT          201 a          136 c          139 g          196 t
ORIGIN      
        1 ccacagaaaa acttccccat aaattcacaa agcgttctgg cacttggtat ggttttacac
       61 cctgagaatt tattattcat gaaataggtc ttttgaagta caatttctaa gtactgatgt
      121 tttatcttta agcagtgaac atgagcagag gcttaaagac ctgctgacaa tcactcagga
      181 atagctcaac tgctcatgtc taggcgaggt cttccccaca cagggaacct tttgtaaata
      241 ttagttacta gaatcacaac actaatacat gtagttaata attatcacta tgtgccaaaa
      301 ctgcacagtt tgctccctga ttacaatatt aaattgctat tgagctgtgg tatttgcttc
      361 aggcaatact actgagaagc ctccaaagac tttggttggc ctccctgtac aagcttggga
      421 aatgcatgcc tgcacagaaa gcagaggcag tgctggggtt tgccagaaaa caaacaaacc
      481 tcagacaata gaaggaaagt tttatcagag ctgaagtgtc ctttcgcttg ggaactgtca
      541 tctcatgaaa gtaaattgat taaggctttt gtggcagacc attaccaaga gcgaggtgat
      601 tcaagctgtg tgtggagcat cctgcactgc cagctctagc tttgttttag ttgcttttga
      661 tggcatctaa aa
//
LOCUS       KCPA01001373             507 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 150997tic ultra-conserved element locus
            uce-3568, sequence.
ACCESSION   KCPA01001373
VERSION     KCPA01001373.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 507)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 507)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="150997tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>507
                     /note="ultra-conserved element locus uce-3568"
BASE COUNT          132 a          122 c           91 g          162 t
ORIGIN      
        1 cagcacataa agggatgaca gtgctccgag cttttgcatt tctgagttgg ttctgttaat
       61 tggaaggagg gttaagaatc tgcaaggtcg tttcaatctc catctgacct tcagagtaat
      121 cctctatgcc aacaccagag catgtcatta aaatgaggtc catatcccgg catcccttta
      181 ttctctcctt gtgcacatta attgctcata agttgatttg atctccctat tctgcaagaa
      241 gtaaattgcc ctcttatttc gccattttca tcctgttttc ttaattaggc ccttaaaaat
      301 ctctagggcc tcaggcaggc ctcatcctgg gaataaattt tgatctcctg ataaagaaag
      361 cccgagctgg aacaatgtca ttggctcccc tccctgctat tctcctgaca tgaaaaggct
      421 atcactctgt gttaatatag gaaataattc acacttcagg cgttgttctc tatttagtgt
      481 tcacactccc ctgataaatc aaatcag
//
LOCUS       KCPA01001374             787 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 151107tic ultra-conserved element locus
            uce-6047, sequence.
ACCESSION   KCPA01001374
VERSION     KCPA01001374.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 787)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 787)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..787
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="151107tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>787
                     /note="ultra-conserved element locus uce-6047"
BASE COUNT          246 a          147 c          148 g          246 t
ORIGIN      
        1 caaaatgtat gtaggcactc ctgtttagta taaatattta ccaagagtta aagactattt
       61 acattaacat atatttataa aacagtgtgg aaaagggtga aaaacaaata tatgccatag
      121 tacaatttta attttgtttt attattcctg ttcaatgtag ctcagccatt aaaagccctt
      181 atttgcatat attatgtcag gattcacaaa gagtcctctg ttttctgtcg tgtccttgca
      241 gcagtctgat ttctcttagt gtactgccgt cactggtctg tgcaggagag atcagagccc
      301 taataataga tttttgacag ggagctcgcc tgctacctgc cctacacaaa tcctcactgt
      361 tcatgtttgc ttcatggcaa caaagcagac agaaggaaaa tgccaagtgc tgagtttgag
      421 gtacagccct gccatagctt gacatttcag cagaatagca gtttatgaga tgcataattt
      481 ttcatctggg actcagctgc cattttcata gaggcttgca gctcatcgac tgactggaag
      541 tagggcaaag gtttacagca tagatcgagg tctacatcct tcctatagct atttaaaaat
      601 aagtattatt ttctagataa tgtcagagaa ctaagcattc catttttatt ttctagccaa
      661 tttcattccc acaaagaaaa tactttgcac agcacaggtg ccatttgtag ttgattaaaa
      721 atgatcataa ttgacttcat tcaccaaaag attaaatgag tcctggagaa agaatgaagg
      781 aggagtc
//
LOCUS       KCPA01001375             389 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 151219tic ultra-conserved element locus
            uce-5402, sequence.
ACCESSION   KCPA01001375
VERSION     KCPA01001375.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 389)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 389)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="151219tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>389
                     /note="ultra-conserved element locus uce-5402"
BASE COUNT          123 a           83 c           72 g          111 t
ORIGIN      
        1 ttgttcatga catgtcatga acaaattacc aaaatgtgtt gtctcctcag gtgtcagttt
       61 tcctctcttg cagtgactga tggttcccag tgttattaca gaaacagatt gatcttttta
      121 atgagctagt ttaatagact ccaaaatctc accgtggctg ctcatccgtg tcagaccata
      181 tgcaccaaga aaacattcag caaaacacaa agctcggctg tcagattgct ctataaaacc
      241 tcacatacag tagacttgga tatgcagata aataaccaga aaaatggata tggttctgaa
      301 attaaaaaaa atcatgaggc agctgtggtt acatgctttg cctcatcctc tactgtagac
      361 agacacactg aggtatgcag ttacccatg
//
LOCUS       KCPA01001376             403 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 151319tic ultra-conserved element locus
            uce-4278, sequence.
ACCESSION   KCPA01001376
VERSION     KCPA01001376.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 403)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 403)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="151319tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>403
                     /note="ultra-conserved element locus uce-4278"
BASE COUNT          111 a          100 c           93 g           99 t
ORIGIN      
        1 gatcagaccc actctggtgc tgttgggaac ggtgggaagc tcttctccct gaccgcaacc
       61 caacggaccc aagaccagcc ccattccact gagaggatgg aagaagaaga cagcgagatg
      121 gccgtaattt atactctcct gcctctactt tatggctttc ttaattcggc tcctgctact
      181 attaatgtag ttaatgttga gattatatct attttctggc gtcaggcagt gatttatcca
      241 agccattttt ccggagccgg ctcccacgct gttaaatcaa gcaactgcca attaagtgct
      301 gactggggaa gtggtaacag agatctaacc acaaattaat ccgggtttga gaggccaaag
      361 cactgaacca aacaacgggt ccaccactga cttaaaggag gaa
//
LOCUS       KCPA01001377             610 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 151428tic ultra-conserved element locus
            uce-5700, sequence.
ACCESSION   KCPA01001377
VERSION     KCPA01001377.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 610)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 610)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..610
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="151428tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>610
                     /note="ultra-conserved element locus uce-5700"
BASE COUNT          200 a          112 c          126 g          172 t
ORIGIN      
        1 accgtaaagc cctccttgtg agctaagtta tgtaaattga agaatgccct tactggcagc
       61 aggtatatta tttcaaagaa gacagacaac tgtgttaatc tcccttctgc ttaatccctg
      121 tctctccaca aatcatcatg tcgacagttt aaacagattt agatgtgact gaaatcaaga
      181 aaaggagata gtctcaggat gctgagggtg atgcaggcct ccaagaggta attttgtttg
      241 tggtagagag agaatacagg agagagagta aatctaacaa atctaacaaa gcagccttct
      301 ggcctagccc tgaggatcaa atccaattcc accaagatac acattaagcc ctgtctatca
      361 cagctttgcc cttgaaaaga caaataatga tgagactcac cttgttgtgc ttgtctctgg
      421 agagaggaga cagaagacat ttaaggaatc tgctctgttg ctcatttcaa atgcttttta
      481 ttatttaatt cttactacct tagaggaggg gaaatagtta actctgttag tttaatcaat
      541 tgcttttcct tgagtaagaa gcaatcacta gagtaataaa aaagaatcaa gaaaatggtg
      601 gtcagtggaa
//
LOCUS       KCPA01001378             671 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 151538tic ultra-conserved element locus
            uce-7553, sequence.
ACCESSION   KCPA01001378
VERSION     KCPA01001378.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 671)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 671)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..671
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="151538tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>671
                     /note="ultra-conserved element locus uce-7553"
BASE COUNT          209 a          136 c          140 g          186 t
ORIGIN      
        1 cactgcaaaa atgcaaaggc acattaccag aaaaaaatgg tcagcaattt ttgcaaagtt
       61 ggcttgcaac agctacaaca ctatgtggaa aaaacagtta tcctgtaata ataagactaa
      121 tgaattcaga aatccattga ttgaactggc tctgggtaga ttatgtgcag gcttgcttca
      181 aggagaggaa tttatgaaat gtttgccgca tccagcgagc actgctgcta taatacagct
      241 gcctcctcag tggtttgctt tgatcctgtg gaatgaaagg acaggaggat cagctcaggt
      301 ctaaatgaga ttacagctgg ttctgcagct tatctggtct aatgccaact agtgtggctt
      361 tgcacgtcct aaggggttta caacagaaac tgtttattga gtatcatcgg tttactcaac
      421 acaagcaggc taatccttcc cagcctcagc atgttgtagg attgtgtatg agccaaacca
      481 aaagctggtg cagccagggc cttcggagcc ctttgtctcg cttcatattg aaaaaaataa
      541 aaccaataac tggccctatt gtgagcaaaa ggttaatctg acctaaaaat cttacaaaag
      601 catcttttaa ccctagaagg gatagtagcc tttctctgat tttctagttt aaaaacagct
      661 tcaacattta a
//
LOCUS       KCPA01001379             460 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 151648tic ultra-conserved element locus
            uce-3964, sequence.
ACCESSION   KCPA01001379
VERSION     KCPA01001379.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 460)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 460)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..460
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="151648tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>460
                     /note="ultra-conserved element locus uce-3964"
BASE COUNT          128 a          112 c           91 g          129 t
ORIGIN      
        1 attgagtagc atcattcagg gatgtggaat gccaaggttc cactggtcac agccaaaaag
       61 gtacattatt ttaaaggcag cctggaccta gcaactcaca cagagaaaca aagatcagtg
      121 cctacctcaa aatcatttgc tttattgtag tgcatgttca gggccctgta cagctcacag
      181 tctctggtta tagacagctc ctcagtgctc gtgaccccgt cgttgatggc ttgccgtgca
      241 tacttctcca tctgaatgta gtaaaactca cggaaattgc taaaccactt gatgagctga
      301 gaggtaatgc atctgttgaa ctgttaaatt taaacagtaa gaaggataag agcactgaca
      361 ttcctcccca tttctttcaa aaagcattct ttcctcccct tccccacccc catgtctctg
      421 tgcttctact ggaaacagct ggcaaattat gttagtgtat
//
LOCUS       KCPA01001380             467 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 151753tic ultra-conserved element locus
            uce-3681, sequence.
ACCESSION   KCPA01001380
VERSION     KCPA01001380.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 467)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 467)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="151753tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>467
                     /note="ultra-conserved element locus uce-3681"
BASE COUNT          137 a          105 c           81 g          144 t
ORIGIN      
        1 ctctcactct tagacacgtg gcttccccct cctatatccc cctactttgg ggataattta
       61 acatgttaca cactaacttt ccagtaatgg cactctagct ttttgaaatt ctgcttccct
      121 gttttatggc tgggcgtcta atggttatct tgcagccctg cctctggcaa tcatgtaagg
      181 aataaataga agctgacaca gtaatttact taaatcttct ccacactttt gcagcatttt
      241 cctccagagg atacccctga aacaacaatt atttgaaatg tcatgcgttc ctgcccctag
      301 gctaccgaca aatgaacatt aaatctatta acaacaaaaa aaattaaatg tttacttttc
      361 tgcgaaggta aaggagaagc tggagaaagg gaaggatgtc tccaataaat ttcttctcaa
      421 taataaagag gtgtagttaa tgttctctct aagcggagtc agcttgc
//
LOCUS       KCPA01001381             510 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 151865tic ultra-conserved element locus
            uce-6017, sequence.
ACCESSION   KCPA01001381
VERSION     KCPA01001381.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 510)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 510)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="151865tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>510
                     /note="ultra-conserved element locus uce-6017"
BASE COUNT          156 a          108 c           97 g          149 t
ORIGIN      
        1 tgcaggtgtg tggcaatgtg atgcaaaagg gagacacaga agtgacacca aaggtcacta
       61 gaatataaaa gggcatgaag caagcaatca gtttgaacct attagaggca gtgaaatgca
      121 ggagaaagtg gggaaattat attacagtgt acaaagtaat aataactgtg ccttcatgtc
      181 ttaataccct cttgtcccag cagtcctgac tttctaggca gcccacttct ccacattaac
      241 agtagtcatt tggagagcaa caaacgtgcc attagaagca cttttacaag tgtatattca
      301 tccaccaatt agcttaatgt ggctgctttc tgcatatttt ctatccaggc ttgcacaaat
      361 cttattaata tttcccccta gcgctttgac agattacctt gtcattatgc atcctggagc
      421 cttttaaaca atatgggtaa actactgttt gcgaggttaa tgacaattat cccctaatta
      481 ctgcataagt cactcagtcc actttatctc
//
LOCUS       KCPA01001382             766 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 151974tic ultra-conserved element locus
            uce-1322, sequence.
ACCESSION   KCPA01001382
VERSION     KCPA01001382.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 766)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 766)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..766
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="151974tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>766
                     /note="ultra-conserved element locus uce-1322"
BASE COUNT          207 a          170 c          139 g          250 t
ORIGIN      
        1 ccatcacatt ggcttttgcc ctaggaagcc aacttcacag aagtcctctc ttcttgccac
       61 ttggcttcac catgaagttc ccaaccctcc atcttccact ggcctgcatg tttctggcat
      121 agtacccacc ccaaaagcat cctgcccagt cagatgatgt atttgaaggc cagatgaaac
      181 aagctagcca gcacagacaa acctccatca gaaaaagttg tgtgtctttc atgaggatgc
      241 tgttttgcat gttgctgtat tttttaatta ttgtaatgag gtgtgattgt ctattggtta
      301 cccacaatac ttcttgggga ctctcccccg gtaactcttg tcaacacttg ttaatctgac
      361 aaaaggctac aaattaagct ctgttaattt aatgttttct caccgagatc taaataccga
      421 aagaggccca aagcgcaact gaagtccttt gattcactgt actttatttt ggtataaatt
      481 tacattcatt attgttttcc tttggatgtg tagccctcaa ttagtgtgat ggctccatta
      541 aagcaagcga gacttcgcct ttaattatta caacaaaaca cctagtttca gcttggggag
      601 agggtctcta ttgacataag cagaggttat aaaatttaat tagccattcc tatcagattt
      661 atggcattca aattgttctg tgtttctttc ctttgatcct tgctgtacaa tccccaagat
      721 ttttgttctg atcaaatgag aataaagctt actgtgcaga gagaag
//
LOCUS       KCPA01001383             729 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 152082tic ultra-conserved element locus
            uce-1005, sequence.
ACCESSION   KCPA01001383
VERSION     KCPA01001383.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 729)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 729)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..729
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="152082tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>729
                     /note="ultra-conserved element locus uce-1005"
BASE COUNT          241 a          159 c          122 g          207 t
ORIGIN      
        1 gcaaaagtca tatgcaataa atatttattg ttagaacaat ttgtggtttc aacaaggtct
       61 tcattagcaa acaaagaaaa aaaaatcagg ctattttcat gtttatacag caaggatgtc
      121 ttttgctaaa ctgcattttg agctacacca gatcaattca ataagagaaa gcccaacaga
      181 gaacagatgc aatataagag caataaaggg aagtaaaaaa aattaaaaat cctttgttct
      241 ccctgcagta cacccgtaaa tctattagtg ttattttcct ttcttctctt ttttgcatcc
      301 caagccagat ctcaagttct ctgaagcaat ccttaatcaa gctccccaaa ggcctacgac
      361 tgcatgcagc aatttctccc ctgctctcag cacagatgtt tcgagcacat tccattacac
      421 ctacatgcca ttacagctaa tggcttattc tgatgaagaa agctgctttc tgctcagtgc
      481 agcaaagggg aaaatagcct cctgtacagt tcgtacactg caacaatgaa atgtgggggc
      541 aggtggtaca acagaactct ctaatgttaa ttacatactg tattaccccc aaatttggct
      601 ggtcattaat tatgctaatt taccttcctg aaaattagca ccactcatgt gaacaaaaat
      661 gaactaagga acagtggttt gtaaacttaa accttttgaa cccccatact ggatcacagt
      721 ggctgccag
//
LOCUS       KCPA01001384             762 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 152190tic ultra-conserved element locus
            uce-5251, sequence.
ACCESSION   KCPA01001384
VERSION     KCPA01001384.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 762)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 762)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..762
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="152190tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>762
                     /note="ultra-conserved element locus uce-5251"
BASE COUNT          195 a          166 c          216 g          185 t
ORIGIN      
        1 tttgtgttct gttttgaagg tcttgatttc ggaaggactg atgcagtttg ctcaagatcc
       61 aaagttcatt gaggtcacaa cccaggagct tgcagacgcc tgcgacatga cgatagaaga
      121 gatggaaaat gcagcagaca acattctcaa tggtaacagc aagcagagcc ccaatggcaa
      181 cctcttgcct tttgctaact gcagggaccc agggcaggac agtgcaggag aggaagagga
      241 agaggtgcag aacccggatt gtaggataag tcaggaggag ctcaaggaca gcaggattta
      301 tatcagcagc ctgtagttgc cagggctgga agcgatgctg gttttttatt tgtttcaatg
      361 ttcctaatgg gtttgtttca gaagtgcctc actgttctcg tgacctggag taaccggaac
      421 agcgttcttc attcatttct gttgggacga gtcgcagagt tgggtggtgt aagaaagctt
      481 ttcaggagag gatataaccc cagcacgtgt ccatgaagga agagtagaag aggaggagag
      541 ccagctccct ctttttttca gtccctgcac aaggaacctc cggagcacca acctcagctt
      601 cctgtggatg gccctagccc tgcgccaaac gggtgtcttt caaccttgct tgtttttgca
      661 catattctgt atgagcctca ccgtctccat aaagccaagg ccctttgatt cggaaggaga
      721 ggaagacttc tgctgtgacg gggaggagga agcaggagaa gc
//
LOCUS       KCPA01001385             383 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 152296tic ultra-conserved element locus
            uce-6281, sequence.
ACCESSION   KCPA01001385
VERSION     KCPA01001385.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 383)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 383)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="152296tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>383
                     /note="ultra-conserved element locus uce-6281"
BASE COUNT          121 a           69 c           70 g          123 t
ORIGIN      
        1 aaaatctagc ctcctgcagg ggagctatta ttgttagact gtactggcat tatcttgctt
       61 atgggggggc atattgttta tgcagtctat ttatcagtgt aggaatatat ctaccaatac
      121 agcaatatct ctgcagtaat ggcatacaag aagaaaagag ttttcatgaa cacagagttg
      181 ctgcctgtag catgtacatc tgagatacta aaggattatt tacctatcat taagatatgg
      241 aatctagtcc agtttttctt gcagcagaaa tcacattaaa ctctctagct attatatcta
      301 acatccattg ggcacctttt cattctgggt aacctaatat aaatgaagaa aataaatcca
      361 cagcaatttg ttgaggcacc ttt
//
LOCUS       KCPA01001386             616 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 152407tic ultra-conserved element locus
            uce-2687, sequence.
ACCESSION   KCPA01001386
VERSION     KCPA01001386.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 616)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 616)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="152407tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>616
                     /note="ultra-conserved element locus uce-2687"
BASE COUNT          199 a          112 c          126 g          179 t
ORIGIN      
        1 taaacatttt tgattttctt ttatgttcat cttaatcaaa ttaagtttca atttaaaaga
       61 caacctacaa catgctaaga aaagctgcat gaagcatctg tcagcgaatg gaatgtattg
      121 ctgttatgcc cacttttctg tgccatttgc tgcctgtaca cagcattgat ggttatgcac
      181 agcagaagct gtaagtcggg tgaacatgtt tatagaattt tggttgcatt gcacaaaaga
      241 aaacagctct caggggaggc agcagcacaa gcaaaaatat aaagggtagg taccaagaga
      301 gtcatgtttc tcaaacacag acgcctgtca gccttgtcct gtggagaggg gttaaagctt
      361 ttaaatgaat tggtgtgatt agtgcaactt agaaaataaa atgaatgtaa actaaaccaa
      421 aacaattata tttctctata attggaaaga aaggttaaga ttgttctacc tctagttccc
      481 tcagaattcc tgactggcca caggtctcta aatcctccag agcctgagac cagaaatttt
      541 cctcctggtc agcctcggtg ttatcatggg tacctgtgaa gctagattta caatgagaag
      601 ttaaaaaaat gtggac
//
LOCUS       KCPA01001387             759 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 152514tic ultra-conserved element locus
            uce-6222, sequence.
ACCESSION   KCPA01001387
VERSION     KCPA01001387.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 759)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 759)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..759
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="152514tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>759
                     /note="ultra-conserved element locus uce-6222"
BASE COUNT          247 a          154 c          135 g          223 t
ORIGIN      
        1 ctcttgggag aacaggatta cgagtggaaa ctgctcagaa tccctaaatc aagaagtcat
       61 ttaacaaaac aaacttaata taatcatatc agccatgcaa acaggaacat catttttgaa
      121 ctgcatttta aatgcaaatg aaattactac agtgctgtgg catttccgtg aaacagtttc
      181 ttggcactag ttccaggctg aaattttcta attttgaccg gtgtttgtga cattacagca
      241 ataatgtgac gaaagcagga ttggctctgt ttgcttctaa ttgacatctg cagttgctgg
      301 gagacaatgg catgtgctcc taatggagag tagctttcaa tcagttcagc aatcagaaaa
      361 taatcatagt tctcatactt gaacacaaag cacttactta atgttttcca acctgctaga
      421 gtctggtttc aaagtgtttg agtgcttcac cattttgcac aatgtgatca ccaggaagat
      481 aagattcagc tgtcaaaaca gataagaatg aaattaaact acttcaagta ataggttgaa
      541 taatgatgat gttacaggct aaacaaaacc cctgtagttt atttccaagt aagcagtgaa
      601 aattggtaac atggtctgca aactgtgact gcaaataaga acattagaag tccttgaatt
      661 tcccaaatgc accacattat cacgaacctc cataactcct atccaacacg tctagttctg
      721 tcctccagca tgttttgctc atcaccttta cctgtcacc
//
LOCUS       KCPA01001388             820 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 152626tic ultra-conserved element locus
            uce-2647, sequence.
ACCESSION   KCPA01001388
VERSION     KCPA01001388.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 820)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 820)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..820
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="152626tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>820
                     /note="ultra-conserved element locus uce-2647"
BASE COUNT          230 a          191 c          157 g          242 t
ORIGIN      
        1 aacaatccag agatgctgct ttacactcct ttaaacaaac ccagcagggc atatcagatg
       61 cagattgagg attaagttat aattacaatc aatatctttg ccatgcccca ttctccaaat
      121 aatatatatt tcagtcagtg cactttgggg atttatctct gtgaggcccg tttctgccca
      181 aatcagcgtg tctttccctt tgatattccc acagtgttca catataccct caaacataca
      241 cagccctggg taatatgtct ccaatgcgat gaaatcaatg ggaacacagc cttttttgcc
      301 tgacagtatt gtcagggtgt attatctggt ttaggctgtg gcttcagttc atagcagtcg
      361 tcagttaaat ttccctttct gaagctgagc aaagtgtggt aatgtcacag ccacaggcga
      421 ctgccgctca caggacggtt taccggtgga gcttagcctc ctggcttgtc acagtgtata
      481 tatctcaggg tcttcttttc cttcctactc agagatttcc aagaatgttg cctggagcag
      541 tcatgggatg caaaaaaaga gagatttttg ttctgcactt agcaacatta ccacacttca
      601 cactcagttt ctgataaggg gaaatttaac tgactgctct gaactagata taccagataa
      661 tacactctga cagtgctgtg gataaaggct ggcaaaccta ctaatttata tttcattatc
      721 cctgcacttg gcttaatctg ttatctctta ctaaacgtta gcaagctcac aaagagctgc
      781 actgaacagc agaaaatgga accacaaaca cctcttgaac
//
LOCUS       KCPA01001389             796 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 152739tic ultra-conserved element locus
            uce-971, sequence.
ACCESSION   KCPA01001389
VERSION     KCPA01001389.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 796)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 796)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..796
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="152739tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>796
                     /note="ultra-conserved element locus uce-971"
BASE COUNT          238 a          133 c          172 g          253 t
ORIGIN      
        1 ctgcacaaag agccccagtg gacttttgat gaacaatgga tgcaggattg ggaatgcaaa
       61 ccatcaggaa attattcaca ttcattattt tgatctgtcc attttaaaat tgaaaatgca
      121 acacaaaaat aacacggtgt ttgcagccga ttctactgat tgcagggcat tgtggaagca
      181 tgtcagtgtt tgctttcttc cctcctgtta gcagacagaa taggtgaaga ggttgagctg
      241 cagatctcat ttctcctgtt ttgctgcttg tgaagtctgc caacagaatc caccttgaca
      301 aagtcaagga ctctgcgttt aatgttgaac tgagtgaata aattatgcat gaaattgtgt
      361 cggagtctct agtgtgctct agaattgctc cttttgatat gaaaggttaa ttcagaaagg
      421 agtccaaaat agctggaaat tgtggggata agtggatagt attcactgtt gtgagctgtt
      481 attactagaa attgcattcc ctctctggct tccctagaga tttcgctttg ctggtgaata
      541 taaactgtac tcaatagaat agcatttagg agtaacaaga gtgtatgtcc acacacagta
      601 aaatattcta atggtgtttt aaaaggaaac tgtacttttt catgtattct atgcacccca
      661 aggatgatat tacatttagg tcaagaacaa ggcattggaa aggtaataag ttttgagtac
      721 atctttatta caaatattct gactgtatga tccatatcaa aggaactggg cagtcgttga
      781 gtttgtatgt gcctta
//
LOCUS       KCPA01001390             506 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 152849tic ultra-conserved element locus
            uce-7018, sequence.
ACCESSION   KCPA01001390
VERSION     KCPA01001390.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 506)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 506)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="152849tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>506
                     /note="ultra-conserved element locus uce-7018"
BASE COUNT          159 a          111 c           89 g          147 t
ORIGIN      
        1 accattcatt caaattccaa gtcctaaaaa gtcagagtct gcagaaggtt ttattaacgt
       61 ttgtctcaac ttgactggtg cttcttacct cactgcctcc ttcgcacaga gccagggccc
      121 aattatggtt ccattaaact tttgacagat ttacttaata acagtctcag cacttttatt
      181 gagcatgcaa gactaacaaa actttggcaa tgcataagtg taacacagtg acaagaagag
      241 agagctttta caattaaatc ttctaatact ggcttcacag tgtggaaatt gtgctacatc
      301 caccaaaaga gggcccagtc tactcaaatg tttaagtact tcaccccagg aacaaactcc
      361 tttgcgtttg gattcagatt actcttgacc tgaggaaggg aagaacagaa attttcagct
      421 tccattttca ggctgaagac aattaaggtt tatggattta gaataacaat caggtatctt
      481 acacttagca gctctataac ccccag
//
LOCUS       KCPA01001391             671 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 152963tic ultra-conserved element locus
            uce-872, sequence.
ACCESSION   KCPA01001391
VERSION     KCPA01001391.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 671)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 671)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..671
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="152963tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>671
                     /note="ultra-conserved element locus uce-872"
BASE COUNT          242 a          115 c          132 g          182 t
ORIGIN      
        1 aacttggcag aacaagctct ccatcaaaac ccagcaccag ctgtactaaa ctggtgctct
       61 ctattcagcc tgggaattac aggagtgcac tgcctggcca ttaactcacc ttccagaacg
      121 gttgggtagg gtactaaaag gtaaatatga gaaatacaat tggaattatg ataaacagaa
      181 ataaaagggg gctaaaatca gaaaggtttt gtgaaaagaa aaacggcttg caataaagct
      241 gaaaacagca gtgctccgag gcaatttaga ctgcaaaaca caaaccatta agtttgtgca
      301 ttatctttta atttaatctt gaatgattta taatccatca cgcaaggctt caaccatatc
      361 caattattct ctgctgcttg attgacaaga aaggtgattt attaagctaa taaaaagtga
      421 tgtgagctga gctcatataa aaaataacca gctggacaaa gactttaaag agacatcgac
      481 cttttttttc tcatagagaa ggttttgtca cttttaccaa ttcagcagta atcaagcggc
      541 aacttaggta agagcgcttg gatataaaaa tgtaaatgtg ggtaacaatt attaactcag
      601 aagaaggtat tttttcacat taacaggaac caggaaggaa atgcaaatga gttagtttat
      661 ttgcagtgta c
//
LOCUS       KCPA01001392             617 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 153064tic ultra-conserved element locus
            uce-5721, sequence.
ACCESSION   KCPA01001392
VERSION     KCPA01001392.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 617)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 617)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..617
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="153064tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>617
                     /note="ultra-conserved element locus uce-5721"
BASE COUNT          201 a          114 c          150 g          152 t
ORIGIN      
        1 taggagacaa acagaactta ttttgcaaag taaaaaataa aaaaaaagtg ggccaaaagg
       61 aaaggaaggg ggctccaaaa ggctgtaaaa ttgtgcaggt aagtcctgtg ctgcatgctg
      121 ttttcaatct gctgtgtgcc agttggaggc tctgagagag cgcgagagaa agagaaggga
      181 taatgctgag aaatgataga gtggctgtga cctccaagct cagcctggaa atccaagaca
      241 ttgatttcac ttagcattcc tgctgagaaa tccggcagag ttcagttgta ataaaagaac
      301 aagattctgt tctaatggta atggcgtatg acagacatat cactttgtct gtcctcagca
      361 ccagagagat gggaattgga gaaaggtcac ctgacctgcc tgagctgttg tgcgggtgct
      421 gctctgagct ttgaacccca gcctggaagc acaattattt ataatactaa atgataaaga
      481 aacctttatc tacagtaatt agaataaagc ttacacaata gtgcagtggc ctggctcaga
      541 aaacacattg gcaaatccat cacaatggca gaaactgaag cttatgtgtt ggaactacac
      601 accttcgttt gtgtcta
//
LOCUS       KCPA01001393             725 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 153173tic ultra-conserved element locus
            uce-691, sequence.
ACCESSION   KCPA01001393
VERSION     KCPA01001393.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 725)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 725)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..725
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="153173tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>725
                     /note="ultra-conserved element locus uce-691"
BASE COUNT          258 a          128 c          123 g          216 t
ORIGIN      
        1 attaataaat gtggtgaaat ggtacagtag acagcatgag agtgatctgc tttttatagt
       61 aattgggata taaacaccta aaatcaggat tttatactga aagggcaagc taaccttact
      121 aatggtgatt actcactgta taatagaaaa ggaaataaaa gcttttttat aaaacgtatc
      181 aaatcctaag agtgctgtta aactcattaa agaaaaaatg aagttagaga aactggtctt
      241 attttttttc actcccagta gagttcattt ctacttcaac aactaagcca aggtcacatt
      301 taactcactt caatttcacc cagtgcacaa gctaatgtca atagtacagc tgccatgcag
      361 agctaaagac tgatggttag acaaagccat ttacacaagg ctgggtcttt catcttctct
      421 cagctagtga cataagaaag cactgaggtt attctcaact agagactaaa actggcatat
      481 tagaaaaaat gttattctcc ttagctgtca cacaaaggat ctgaagaaat gtagaaatgt
      541 ttttttcctt ggtcatctag ggagatcaca aagtgactct aatagccttc actctgaaat
      601 tttcacatgg tttaagtgat tgccaagtct gatattttcc atttacactt cattgccatc
      661 agaaaaagaa aaaaatcaat atacctacct actcaagtgt gtcacaggat gagcttataa
      721 aagaa
//
LOCUS       KCPA01001394             459 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 153275tic ultra-conserved element locus
            uce-3575, sequence.
ACCESSION   KCPA01001394
VERSION     KCPA01001394.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 459)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 459)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="153275tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>459
                     /note="ultra-conserved element locus uce-3575"
BASE COUNT          156 a           82 c           68 g          153 t
ORIGIN      
        1 gtataaatat tcacatgagc aaagatgctg tcaaattcct gacttgacat gtaaaatgaa
       61 aatacaacaa agatacccca aaattgggac ttggctgcat agtcagggta aagaaatgca
      121 cctggaagat tgtgttttgg ttcagggaat tcaaatgaaa gctcctcaaa ctcgacagtt
      181 taatttactt ctcttaagct ctttaatacc aaacttatca gttctctctg ttaggcatta
      241 acttgttaaa tgagtcttaa ttatacataa gcagatggag atttgaatta aaattacctt
      301 acactcgagt ggctttagtt cattataaca tatcttcctc ttaatcattt aggcagtctc
      361 atcatctttc atatataaag ttattaaagt attccaattt ccatatttct tcagatacat
      421 ccactattaa atggcacata atacacatta gatggtgac
//
LOCUS       KCPA01001395             598 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 153387tic ultra-conserved element locus
            uce-7768, sequence.
ACCESSION   KCPA01001395
VERSION     KCPA01001395.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 598)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 598)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..598
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="153387tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>598
                     /note="ultra-conserved element locus uce-7768"
BASE COUNT          170 a          129 c          112 g          187 t
ORIGIN      
        1 agtggtgtta tgttccatta ttttgtattt taacaaactt tcaaataatt acactattaa
       61 ttttgactga cctttcaaaa ttagtatcac ttgctagtga gattatgtgt gtgaatgttg
      121 tgtttgcccc taccattttc catatgctct gcctcaccaa cactgccatc cggcgtagtc
      181 ctttcgtagt tgtcctctgg gagtggaagg gcacccagtc ttggccctga tgaactctta
      241 ctgcttggtg tttctgactc ctccagaccg ctgtcatagc aactctgcaa tgacccttga
      301 tgcgggtcct gaggctgact cacaacagaa aacgtcactc tacgaaacgg ctgcaagaga
      361 aaagattctg aatgtcactg gaaagttcag tctttgaaca actgattctc aaaacatgac
      421 ttaagcaaac taataacatt taccaattaa acaattttgt ctacattaaa gcaaacagaa
      481 agtacagttc ttatataaaa ggccgctgga cagagtatgc atggaatttt gttgctggtc
      541 cagaaccttt acacagttta tcatagcttc ctttcaaatg gctataagaa agctggtt
//
LOCUS       KCPA01001396             499 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 153492tic ultra-conserved element locus
            uce-4010, sequence.
ACCESSION   KCPA01001396
VERSION     KCPA01001396.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 499)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 499)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..499
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="153492tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>499
                     /note="ultra-conserved element locus uce-4010"
BASE COUNT          172 a           74 c           95 g          158 t
ORIGIN      
        1 tttattttta atgactagtt ataaaggctt gtacagatat gcatctgtaa gcaaactggg
       61 aataggttag agaacacaat tccctggtgt aaaaagcaag gtttagcagt aatgctttta
      121 atctggactt gtagaggatt caggagcatc catagatctg cttcagtaat taccataccc
      181 caagtggcac tggaagagac atttgcctaa aaacttgatg tcttcattac actgtttaca
      241 ttttaattag aaacatgaaa attagtgatt catatggaca actatagttt aagtgggttt
      301 gctcaccatc caataaatca gaaaaaagag gcaaccctac aacctgcatc tgcaagaagc
      361 aaaattacag ttgtaataaa cagtttacta ggaatcattc atgggaataa tgtgttggta
      421 ttagaagctg gtttttgtat tttatcagag aggaaatttc tatgtaaatt agagacttct
      481 tttaaaggta atgctaatt
//
LOCUS       KCPA01001397             635 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 153602tic ultra-conserved element locus
            uce-5824, sequence.
ACCESSION   KCPA01001397
VERSION     KCPA01001397.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 635)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 635)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..635
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="153602tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>635
                     /note="ultra-conserved element locus uce-5824"
BASE COUNT          210 a          127 c          109 g          189 t
ORIGIN      
        1 agaaggctga ttttatggag aagacaactg tgtaatcatt cagctaaggg tcagattctt
       61 cctgaacaga cacagattca cctcccagag atgctcttta gtggaagtaa acagtgttgg
      121 caatgttgca cacacaagca acaaacagtc ccagaggcct caagaaatga cacagaaagg
      181 cctttgagct cagttctcaa tgcacttttg tttttcaaaa caagaagaaa ggaaagaaca
      241 acctcacttg ggcagaactt accttgccaa actgttcaaa gtattgcttc acatcttcca
      301 ctactgtatt agccgataat ccacctacaa atattttctt tgttcttgtg accatctgta
      361 agaaattaca agacaagcat atggtttaac cagattattt caaacaatat gtggaaaaaa
      421 gaaatattct tcagatccta tccctaaccc agataatgag actacttcaa gcaatttcaa
      481 ttcgatttga ttagatactt ctttctctgt cttgttttgt ttttatttga gagatggctg
      541 agtaaaggct ctcaataaca actctagccc ccggatattt taaatgattt ttattgtgct
      601 tctcaatgca aatataagtg aaaaaggagt ccaag
//
LOCUS       KCPA01001398             781 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 153712tic ultra-conserved element locus
            uce-3085, sequence.
ACCESSION   KCPA01001398
VERSION     KCPA01001398.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 781)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 781)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..781
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="153712tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>781
                     /note="ultra-conserved element locus uce-3085"
BASE COUNT          254 a          133 c          131 g          263 t
ORIGIN      
        1 atagcaaggg gtcatatctt tgtctttctt ctacaattgc atatgacaaa ctttgcactt
       61 taaaattgag gcttcaaaga ccaccataag aaattaaacc aactctacgt acactgaaaa
      121 tctgggttgt cccataaatc aagtgtgagt tatttacaaa cttgaggaag aaactatgaa
      181 tgagcacttc ctcttctcac ccagggccta tagcttctct gctgttgcaa gattgtagat
      241 aagtttggta ttcaggttca ctgtttgacc cattaaactg gtattgaggt ataatttgtg
      301 tgttttccca gtacggttgc acatagaatg ggattcattt ccacaagttt gaataaattt
      361 atccagttca gtgaacctgt tgttaagctt agcaaaactc agtaggtggc tttaaagtcc
      421 tgtaattagc ccattacata aaatctgtac tttagatttt tgcacattgg ttaataagta
      481 taacgtgctt cgtatatata aataacatta cattaaatga tgcaacataa aggaattaaa
      541 ggccaaagta gttaaataaa atacttgaag gagatctcaa attagcatgt ttaattccaa
      601 ctcattgaac aggaaaaggc tttagcctta ctgtaccagt tctatacaat gtgcagaata
      661 gcagatattt agtctccatt ttacataagg ttgctgtcat ctctgacctc tgtgtgactt
      721 tggaaaaatg ttctaatttt tcttttaaaa tctaatcatt acaatgtcta aatatagtaa
      781 t
//
LOCUS       KCPA01001399             635 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 153819tic ultra-conserved element locus
            uce-2018, sequence.
ACCESSION   KCPA01001399
VERSION     KCPA01001399.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 635)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 635)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..635
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="153819tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>635
                     /note="ultra-conserved element locus uce-2018"
BASE COUNT          196 a          140 c          113 g          186 t
ORIGIN      
        1 tattcaaggg ccggtttgaa gattcctacc atgtggtcct tatttttaca ttttcagccc
       61 attttcttcc caacccatct caggaattgg gcagtcagca agagccagag agtgctggca
      121 tgtatcatta cattctcaag atggcatatt tactgctatt gccagcaggg tcgtgcttct
      181 gtcctagtaa atgtagtgga gtatgaaaaa ggcaattaca tctcactggg tgacctttta
      241 acagccatga ctacctccta tctatacata attattatag gtgatgattt ccaagtatta
      301 caatctccta cagcctcctt taattcacat cacatttagg cacgtttgtc accagtgcta
      361 gaaattttaa cccccgaaaa ctgaaaaaat agaagaggaa aagtgatagc aatggatgtc
      421 aagctctcaa gtcatcctaa taaaaacaca gcaaataaga tgtcgccctg tttgtattca
      481 ttatcagttc ttacatgctc cgactcttgc attaaacatt agacagcctc tgatgcctgc
      541 ttaacagttt aattccctcc tcagtattca ggctgtcata ataaaatcag tgaagcacac
      601 aaagtcaaat aagagcaaga ggaggcattg aacat
//
LOCUS       KCPA01001400             466 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 153923tic ultra-conserved element locus
            uce-2699, sequence.
ACCESSION   KCPA01001400
VERSION     KCPA01001400.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 466)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 466)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="153923tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>466
                     /note="ultra-conserved element locus uce-2699"
BASE COUNT          142 a           80 c           95 g          149 t
ORIGIN      
        1 aattccttgg cgtattgcag gagcatgcag tacagatgta ggggaaacct aggtgtcagg
       61 gatcctgttg gtatgattga cacataaagc aaatttttct gccattccga tgtgtgcttt
      121 ctcatggata tctctgagac aaaccattgg tgtaaaccct ttgtcatttg gtgggttttt
      181 attttaatga aaggaatcgg ccttgtgtgc aaataccagc ctttgctgtt tgacatgtgt
      241 agaaatccaa tcagatgctt aattagatcc taacatgaat tccaaacagc tggctaattc
      301 ccttgtttct gattaaagag attacaaaaa taaaatttaa cattgcattt acatacagct
      361 ctaaaaggaa acacttaccc ataagtttta gtcatttagg aaattcatgt ctgctcaatg
      421 ctagggatca aagatttttg catgatgaat tgcagagtga caagag
//
LOCUS       KCPA01001401             613 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 154030tic ultra-conserved element locus
            uce-6766, sequence.
ACCESSION   KCPA01001401
VERSION     KCPA01001401.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 613)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 613)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..613
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="154030tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>613
                     /note="ultra-conserved element locus uce-6766"
BASE COUNT          191 a          106 c           97 g          219 t
ORIGIN      
        1 ggctgcagct cagctgcaca gtagtatctt tacatctgtg ccagctaggg ttattactga
       61 gttttataac ttctgctata aataaagcct tgtcatctaa gcattcaatt taaatacctc
      121 tcagtttatt tttgaacact ggaagttaat aataaatatc atctttgttt tctaattttt
      181 ttactgagtt gatttaaatg ctcttgacag ctccaatcca atcctcccat ccaagctgac
      241 aagcatgaca tgcatctctg catacaagct ctcaattatg cataatccaa tgttttctag
      301 ggttttaatt gaatcactag tctcaaactt gttattttta atttacaaca tttgatttct
      361 gacaccggcc cctctatgtc ataaattatg caggcaagag ccttagttgt gtgggtgatt
      421 aaaaaaaact aattaggcat gattaaaaaa aaataaaaca gagaccactt aaatatgtgc
      481 atgttaccat gtaagagagg cttatttcac tggaaatgcc tgggtaattt ttttttttaa
      541 gagattatgt tcagttcagt acaatttgat tgattttgac agaaatgaaa gaaaatgtag
      601 gattttttct tcc
//
LOCUS       KCPA01001402             712 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 154140tic ultra-conserved element locus
            uce-2860, sequence.
ACCESSION   KCPA01001402
VERSION     KCPA01001402.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 712)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 712)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..712
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="154140tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>712
                     /note="ultra-conserved element locus uce-2860"
BASE COUNT          206 a          163 c          119 g          224 t
ORIGIN      
        1 tgtgtaagac tgctaacacc tattcctcca cctcctgtct caggggttaa gaccttggta
       61 cgttgccagt ttactgctgt ggtcccttcc ccttatataa ttgcagtcct tcccagagcg
      121 aaggaaattc cctgagcttt tgctctaact agccacaatg tttccctaca aaaaggcact
      181 tctttaaaag taataaaact ttcacattat taactttttc ccttttaaaa gaggctgaaa
      241 aatgccattg taccacatta aagaccttta cataagactc accattggct aatgagcctt
      301 gttgtacaat ctaccacatg caactgcctt caagtgctgc ttttaactta accttgatgt
      361 agtgccagga atgtgcaaag gactttgatg gcaggggcag tcccctccct gccttttccg
      421 tattgattct ctaacattta aattttttat cagagcagct actttatgtc ctgtaaaaat
      481 catctgccct atagaaataa gcaagaaatc agctgtttat agtagaaatg ataagaaatt
      541 gttgatactt tgtacttgtg cagtgacttt cttcctggag atacagacca ctccataagc
      601 gtcctcacaa ctcccctgac aagaaagtgt cataatctct gctttatcat gaatttcagt
      661 gaatttccag aagatgacac agaatatcaa cgggatctga agaattttta ct
//
LOCUS       KCPA01001403             535 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 154248tic ultra-conserved element locus
            uce-1718, sequence.
ACCESSION   KCPA01001403
VERSION     KCPA01001403.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 535)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 535)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="154248tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>535
                     /note="ultra-conserved element locus uce-1718"
BASE COUNT          189 a          103 c          101 g          142 t
ORIGIN      
        1 accacagggt aggttacagt cagaaacggc ctctcagtgg tgtgttaaaa aggatggtct
       61 tttcaccaaa tcatttcaca gaggcaaaac agacaaacac aaagagttga gactttttct
      121 cctacattaa atagagtaac tgataaggtc agacatatga tacctaaaga catgaatctg
      181 tgaactcttg aagtcaaagg acttctctgt gcaaaggaac aatctttcaa aggaaataga
      241 tcatagaact ccactgaatc ccctttaaac tttatgaagc aggaggagaa aaagctctaa
      301 gtagggaagc ttgacagaag agccttgaac tattttctga aggaaagatg agaccctccc
      361 taggctgcca caaaacatct ttttttttct aaaggctctt ctgaactttg atatgtgcca
      421 agacaccgct attgaaagct gtataattat gtgctatagc cactgtagaa aatgctttgt
      481 tcaccacaac aaagaacaat aagcaaagta aagtgacatt acactgtatc ttttt
//
LOCUS       KCPA01001404             491 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 154354tic ultra-conserved element locus
            uce-5007, sequence.
ACCESSION   KCPA01001404
VERSION     KCPA01001404.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 491)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 491)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="154354tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>491
                     /note="ultra-conserved element locus uce-5007"
BASE COUNT          146 a           89 c           97 g          159 t
ORIGIN      
        1 aaaaatgaag tggcctttaa tacacaactt gctctgggtt gttgctaggt gtgaaattaa
       61 ggagttcact ttccaccacc gcttctctgc ttctaaaaac tgtcacttgt taccaagcat
      121 cccacaactg tgtttccaat aaagattaca ctgatatttc tgttcagcta catgtcctgc
      181 agggctgttc tgcggtcttc tgatcagtaa aaatgtaata acattttcac atagtcaata
      241 tttaattctg taaatgcaac tggtagttgt aatctaggtt attaaccaca cagtgattta
      301 tgagggaggg cagagagtgg aggggtgcag agcactagga aggtcctctg gtgacaataa
      361 aaaagttata aatttcatag ctctgcctga gaaatgcatt tatatcctat attaagaata
      421 gctttttata aattttaatg atccatgtta ttaatggtgc tgtcatcatt actgcctgtg
      481 caagactgca g
//
LOCUS       KCPA01001405             509 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 154462tic ultra-conserved element locus
            uce-7122, sequence.
ACCESSION   KCPA01001405
VERSION     KCPA01001405.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 509)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 509)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="154462tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>509
                     /note="ultra-conserved element locus uce-7122"
BASE COUNT          152 a           97 c           90 g          170 t
ORIGIN      
        1 acaaccgtac tgctttgagg tttctttcac attaagctac atttaatatt catttcactt
       61 ttttttctat taattaaaag taaaccgtgt attgtatggt acattatccc tctaacagcc
      121 ccatgtggag atcatgaagt ggaagactaa tggtgtagac tttagcattt agttttaacc
      181 aggataattt acatatctgt gagaagagtc cgaggcatgt gtaaataagc agaactcgca
      241 gatatcagcc ccttgctcgg tctgctctgg actggagagc cacatttatt ccatcactca
      301 gctaatttaa tgagacttta tccagcatcc atttctgcag aagacacaaa acttattatt
      361 aaggagaggc atgtggcagt aagaaaaatg tgtttgtttg cttttttatt ctattacccc
      421 caagtagcaa aggtgatccc attcactgtt cattaaagtt tacctttata attagcccga
      481 tatcaagagc tttatgctga gatttcaaa
//
LOCUS       KCPA01001406             368 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 154570tic ultra-conserved element locus
            uce-3915, sequence.
ACCESSION   KCPA01001406
VERSION     KCPA01001406.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 368)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 368)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="154570tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>368
                     /note="ultra-conserved element locus uce-3915"
BASE COUNT          109 a           60 c           69 g          130 t
ORIGIN      
        1 tttttgatat tgcttattgg agtgttcttc aaagatatta ttagctgcca atatccccca
       61 tgggcttgtt ttttgatgta tctgtgcagt gttacagtat gctgtttctg ctggtgatat
      121 gttgctaaga gatttaataa tgggtaaaca aacacaacat gtggtaatcc attttgaatt
      181 aaaagtttat taaatgctag cttgatgact ttctggctat ttacaattaa aggaacaaac
      241 cttagagagc tggagatcac gtgatgaaaa tcacaacttc aacatttcca tcaggtgttt
      301 gtgatctctg gcaagctgtc atacattgat atgccctata aatacagtat tatagctgtt
      361 aaaccacc
//
LOCUS       KCPA01001407             627 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 154677tic ultra-conserved element locus
            uce-323, sequence.
ACCESSION   KCPA01001407
VERSION     KCPA01001407.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 627)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 627)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="154677tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>627
                     /note="ultra-conserved element locus uce-323"
BASE COUNT          189 a          119 c          108 g          211 t
ORIGIN      
        1 ccagaagtac agatttgcct tagcatcttt gtccattcaa atacaaaatt aaattttcta
       61 attaacgcta tcctttggtg ctaagcattt tcaaacagct gaatatcaca atatagttga
      121 tgcactccca tgttatcaaa taaatgctca aggtacagca tataatgttg aaaaatagaa
      181 aaataaattg accttgatga agtgtgtctt cttttgtctg ttcccaggga agtttatttc
      241 aggtatttct actgctgaaa tgattagagt taacagcttt ttccctccat tttattttac
      301 agggtctctt catcttcctg atatatggga tgtacaacac agaggtaagt ctgcttggag
      361 tatctcaagg ctgacagagt gaatgagaga aatgacaggt ttcttatctt gataactgag
      421 ggacaaagtt ggctttccat acgagtgtcc tactgccctt catgcttgga ctggcttata
      481 tgcatcccag cttaccatta aacacagaca ccctgaataa agggacagac tcatttctca
      541 taggcattga gtaatatttt actgcttttt ttgaattcct ggtccaacac ttagctaaac
      601 ctataatcta atgtacattt tgaaatt
//
LOCUS       KCPA01001408             452 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 154788tic ultra-conserved element locus
            uce-7978, sequence.
ACCESSION   KCPA01001408
VERSION     KCPA01001408.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 452)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 452)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="154788tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>452
                     /note="ultra-conserved element locus uce-7978"
BASE COUNT          117 a          125 c          116 g           94 t
ORIGIN      
        1 gatctggttg taatccagtt gcctgttgaa gagattagga aggcgcttgc aaggcagcct
       61 cccggagcgc ggcggcggag cggctgcggc cgccgcccgc tcggctggcc ggcgcgccgc
      121 caccgaaatc cctttttgtt ctcaaccggc tgcgcaaaac ggcagcgctg ggaaagctcc
      181 agtaaataat aactgcacct tatattaaat gccaaaggaa tgcaatttca ttacatcaag
      241 aaaagctatc cattaaaagc tctcagcgtc atcttgctga aacaatttca ttaaggtaaa
      301 ggacggtaaa tcacttaatg tcacacgcat cccctcggtg acctaagaga atccatttat
      361 cagagcagcc cagctgcatg ttaattccag ccgccgcggc agggaccagg gacagacacc
      421 agttttaggg gtctccccat gcctggagca gg
//
LOCUS       KCPA01001409             718 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 154895tic ultra-conserved element locus
            uce-1835, sequence.
ACCESSION   KCPA01001409
VERSION     KCPA01001409.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 718)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 718)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..718
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="154895tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>718
                     /note="ultra-conserved element locus uce-1835"
BASE COUNT          217 a          131 c          156 g          214 t
ORIGIN      
        1 agtagaaatg gcacattaaa tagtgcttta tttgtattac ctttcttttc atggcacttt
       61 gttacagcag cttttatgca cttagaaata aattaaattt caaaacaact gccagctagt
      121 aaaaaactgc aagtgttccc tgtattttaa taaacaaata cggacatttg gcaaaattgt
      181 aaagtttatg aaatgttttt ggtagcgagc atgatatttg gttgtttagg taagtgcctt
      241 actaagtgtt tgtggaaagg aaaaatgcaa cttacaagtg atcttcttgt ttgttctctt
      301 taacagaaag ggttcaaaga caccagtcag tatgttgtag gagaattggc agcactagag
      361 aatgagcaaa agcaaattga cacccgtgcc gcgctggtgg agaagcgcct tcgctatctc
      421 atggacacag gtacggtgcc caattacact gtaaacagtt ttggcaaatt gagcgttcac
      481 aaactcttat agagttttgg aagtgtgaat ctttgaagcc tgaatgttca gcaaaactgc
      541 cttgaaaata aaaaggctgc gatttgcagc cacctctctg ggccctggtg ataagagtgc
      601 cttcatggga agtgataact tgccctgata ccgtgtgagc cagcactatt gaacagtgtg
      661 ctcatccatg cagagttgga atacacatct gtgcctcatt gatatgccac tgcttaaa
//
LOCUS       KCPA01001410             694 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 155009tic ultra-conserved element locus
            uce-5062, sequence.
ACCESSION   KCPA01001410
VERSION     KCPA01001410.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 694)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 694)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..694
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="155009tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>694
                     /note="ultra-conserved element locus uce-5062"
BASE COUNT          187 a          131 c          136 g          240 t
ORIGIN      
        1 ccccaaggta aaatactcga aattgaaaat gcagctgggg ttttagcttt gaaaccaatt
       61 ttgattgtta ctgctgtcat taattttcct ctttccagat gtttcatgaa tcacattttc
      121 tgcatatgtg ggctgcccta tacaccccta ttgttgcaag ctatcccagt aaagacttgc
      181 agcaatgcca tattccccct gtgaacacag gttatttcaa gcttttgtca gtggcaacca
      241 ctcttatgca gcaactggtt ttggagtgct ccctgatgtc agtaccacct ggatgtggac
      301 ctttgctacc tgtaataata ccagtggcct catttgctgt atcattacaa tttggcttct
      361 tatgttaata agtttgaaaa agaaagctgg tgttctagaa gttgcccttc actggttgtg
      421 taaataaaaa tgtagaatga cacttctgac tgaagttagt gtggttttca taactgtgca
      481 ctacaacaga gctgtaatca cagttaagtt agaatgtaat cccaggacaa ttttaagcaa
      541 atagcccaca gtactgcctg tgaaatagtg aaggagggca tttctgtatt ccatgacggg
      601 ggttaagaat gggtttatat gatttctcat ttttgtagtt tttatttatt ctatcagtct
      661 ttaacaaatg tttattgctg caatttttca gtgt
//
LOCUS       KCPA01001411             433 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 155116tic ultra-conserved element locus
            uce-7318, sequence.
ACCESSION   KCPA01001411
VERSION     KCPA01001411.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 433)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 433)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="155116tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>433
                     /note="ultra-conserved element locus uce-7318"
BASE COUNT          157 a           84 c           75 g          117 t
ORIGIN      
        1 aatctttgct aatcgaatac cacaaatgtg tatttcaaag atcaaaattc ataaactcac
       61 aagcaaagca tagaggagat tctgacaaat acagatgtaa ttgtgtgggt ttctaagatg
      121 tgattagcaa atcaactaag taacagtcaa aatttgatac gcagcacaga tttgaatatg
      181 tttatgcaaa gctaatctgt caagtgtaat aaagcagctt gaataaaatt taagctgaaa
      241 atccactgaa gctccccatt tcagggagga aaagctatta aaaggaaatg aaggtcaccc
      301 tcccagttta tttcacctaa ttgactgcca atagcttacc acaggcaaac cgactgcaga
      361 tctgcaattg agaaactgat gaaaggagca ttttcaagct gaggctcatt cttttaatcc
      421 tccctcactc cta
//
LOCUS       KCPA01001412             781 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 155229tic ultra-conserved element locus
            uce-6866, sequence.
ACCESSION   KCPA01001412
VERSION     KCPA01001412.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 781)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 781)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..781
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="155229tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>781
                     /note="ultra-conserved element locus uce-6866"
BASE COUNT          237 a          167 c          131 g          246 t
ORIGIN      
        1 atcgggatgg atccaaaatc taatgacaag cgtgaaaacc cattttggat cccccatcag
       61 aactctgtat tatataacca gtattttctg agtatcttct attgcttgac aaccctgatg
      121 tcacactgaa cttggagccc atttctgttt ttgtatagaa actttaaatc atatccgttt
      181 gtgaacacac acataccatc gaggatattg tcttattaaa gagtttaagc ctaaaggtgt
      241 atgcctactt ttaaaagaaa ttttctgatt gtagataact gctcaatttg atttagtgtc
      301 caatgatagt gatggggttg ataactgagc attcatcggt aattcatctt gtgctagtag
      361 aaatttacag caaagcagtg ctttcccaac actgacaagt cctattaatc ttcttcagac
      421 acatttcaat aggtgtctcc atctgtgccc aacatctaaa cactctggca tcactgggga
      481 cttggagaca ccttcatttc aggttacact actgaaaatg tgatactaga ttgtactcta
      541 tttttaacct aattctctct tttcattcaa ttagcctttc ttgcctgcat ttttctactc
      601 atgtgtaaca tccttttccc aggaatagct taaaaatgag atttagttac ttaaagagac
      661 agaatctgcc agggcaagag agaaaagcag aataacaaag ctcagggaca cagcgtggtg
      721 accaaattgc cagtcaccaa acacatcctg aggaacattc tcacaatatt cccctcctga
      781 t
//
LOCUS       KCPA01001413             575 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 155336tic ultra-conserved element locus
            uce-1061, sequence.
ACCESSION   KCPA01001413
VERSION     KCPA01001413.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 575)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 575)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="155336tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>575
                     /note="ultra-conserved element locus uce-1061"
BASE COUNT          198 a           96 c          108 g          173 t
ORIGIN      
        1 aaaccagaac tgctataatg caatcagttg caacctgaaa attatatttt gaaaatcaag
       61 tttattaata tgtaatcttt aggtaatcat atttatcctc ctaatttaca caatatttat
      121 gatagtctac acgtccttga aatagggaac agggacacta cactatgaaa aagtggtcta
      181 gctgctggag ttcataaatt ttgttcagct ttggatgagt tcaaagaatt gccatgtaag
      241 aaaagcctta cagagggaat ttatctgatt atggcagtaa taattaccca gctgtttatt
      301 gcagatagag aaataattca tgtaggcaat aggccgtggt ggcaatgaca ctccacattt
      361 agtaaatatg caaactgttc atttctaatt aaccaagcta gaggatgccc ttattaaatg
      421 tataaactaa aagtgccttc ctgacaagtg atgaattgtt acattgcaca aactcttgcc
      481 acagaattac cggagtgaac ttggggctta acttcattaa gagatcttgt gggatagtta
      541 aatgaggatg gacagcataa caagacctac ctgac
//
LOCUS       KCPA01001414             752 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 155446tic ultra-conserved element locus
            uce-3069, sequence.
ACCESSION   KCPA01001414
VERSION     KCPA01001414.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 752)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 752)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..752
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="155446tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>752
                     /note="ultra-conserved element locus uce-3069"
BASE COUNT          177 a          156 c          166 g          253 t
ORIGIN      
        1 gcaccctggc cttggcagtg ggcttaccta gctccaggag aagccctggg ctaaaattct
       61 ctggtttaaa acctgctgag accagtgtgg actttacttt gcctcttaac tcctgctaag
      121 cctgaacctg atgagctgct cagagctgga ttttccctaa taaattcctt tttttgaacc
      181 cacttgttag tcaagcgttg tgcacactaa ctacagcgag ggccctgggc ataaattact
      241 ctcacgtggc actgtctctg agcagccccc cagttatgga ttactttgtt ctcgacttga
      301 caggaacata attagaactg ttgatgaaat ctaccaaatt gttcctccgt ggcctcaatg
      361 gtcaggaaat ttggctgagt cgtatttgtc accgacgtaa aggctctaaa cacttcatat
      421 taactatgtt attaatgtgc cctctaatct gtccgtgaat tggtaacact tggagggagc
      481 ttgtgctcta atagcacctt gtgatgaatt cattgtaatg ccgttcaaaa gtttctggag
      541 ggtataaaaa gtgaatattt ctaggttgtt tcttttctgt atgtgcattt ttatgttata
      601 cagttttgtt ttgttttgct taactggaga ttcatttagg ctttacattg acagaccgtt
      661 ttctgttcta taggatttgc tgacatttgg gctgtttcat tgccagagga ggctttgtgt
      721 gtcccaaagg aagtgagtga tctggccata ac
//
LOCUS       KCPA01001415             543 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 155558tic ultra-conserved element locus
            uce-4830, sequence.
ACCESSION   KCPA01001415
VERSION     KCPA01001415.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 543)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 543)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="155558tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>543
                     /note="ultra-conserved element locus uce-4830"
BASE COUNT          191 a          110 c           86 g          156 t
ORIGIN      
        1 aaaccgtgta aagcacatct cagctttaaa gcaccacaac atattactgt gtaaaataaa
       61 agaatcatta ctacttattt ttgtaactgg aacaatttaa gcacaaatag acacaagcaa
      121 acaaactgct atcatgtttt tctttcccag taagataaga aagaaccttt taatagttta
      181 attttgtgag tattaaacaa ctagtgtgaa aaacaagctg catgtaaact atttctactg
      241 cctctgcttc aatgactagc tgaggcaacc tgttatagga ggtgttaatt ggcaatagga
      301 gtacaagtca gaagcatgtt ccccatcgtc ctaacccagc aaggctaggt cattaaagtg
      361 gaaatgaatt ctttcatgcc gacttaaccc tttcactaca tattttcagc tgttatatcc
      421 aaagacaatt gagaaagact agctatttat tcaccccttt ctcttcactc tacctcctcc
      481 agaaaaagtg tcacaggtaa agatgaatct gtaggtaaaa aggcaactca ggcataaatg
      541 caa
//
LOCUS       KCPA01001416             755 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 155664tic ultra-conserved element locus
            uce-6106, sequence.
ACCESSION   KCPA01001416
VERSION     KCPA01001416.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 755)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 755)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..755
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="155664tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>755
                     /note="ultra-conserved element locus uce-6106"
BASE COUNT          235 a          141 c          151 g          228 t
ORIGIN      
        1 agaagatggg tcataatagc taatgtagta ggcaagaagg gagaatggag cacaattccc
       61 taaactcgat aaaataagca attactcttg ttatctgaat ggctctgtca gtggagaagt
      121 tgtctgtgtc ataacagaat ctaacaaagg ctgttgcctt taagcatcaa aggctttggc
      181 cttattatct ttctaagatg tgcatgtata ataagttttc ccaacaaatg gcaaggaagc
      241 atctctggca aaatataaaa tggtgataaa ctatgtccaa atgattaatt cacagaaatt
      301 ctccatcaca ctgcagctac atgtgcctgt ctcttctgtt atgcccttgg agattttcat
      361 actaaacgta tgtgcatatt tttcatggcc actgatattt gaattgcagc ctgctcccat
      421 gcagaacata aaacacttca aactgcataa tgctgactaa attataagtt ctccagtggc
      481 ctgaggtagc aagggccata ataatgaatg tgcttaagtg gtttgtgtag actttaattt
      541 taatgccctg acttgctgct gccttttcta aagctagaga ttgtctcata caatcacaat
      601 aacagggaaa tagaaactgc attatgcttt gaaaaaatgt gggatgcaaa gcagaagctc
      661 cactcacagt gatagccgac tcagccctgt tggtcacatg gaatagaaaa tgctttggtg
      721 actttgtcca cgcttgtaat tatatttgag ctgtt
//
LOCUS       KCPA01001417             519 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 155774tic ultra-conserved element locus
            uce-2770, sequence.
ACCESSION   KCPA01001417
VERSION     KCPA01001417.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 519)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 519)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="155774tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>519
                     /note="ultra-conserved element locus uce-2770"
BASE COUNT          199 a           92 c           68 g          160 t
ORIGIN      
        1 ccccaggaag aacaaccacc cagattttcg gcatataatt agcacaaaag taagaatttc
       61 tcaaaaataa ttgtttgttc ataatgataa tgggaatgct ttttgcactg gaatgaaaaa
      121 caatcactga attctttgca tattttattt ttctttttga tttccaactc acacacatct
      181 ggcatatttt acatctttgc aataaaacat ggttacaata gcttaaggaa tttatatatc
      241 caaaatattt caccatgatc tcaagatgaa atgaacttgt cttccagatg ttcaatagtc
      301 tcccaattct aagctacaaa ctcaagatat tgcttacaga caggtgatga ataacttaat
      361 cattacgtta tgatttccaa accttataaa tacaaacaac aatgaagaag gaaattcagg
      421 gctaaactta ctaatacaag gtgaataaca aataagtaat cacatcaata aataatgata
      481 tgttcctggt gcaaagtgcc aatacaaaga atccattat
//
LOCUS       KCPA01001418             354 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 155873tic ultra-conserved element locus
            uce-5250, sequence.
ACCESSION   KCPA01001418
VERSION     KCPA01001418.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 354)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 354)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="155873tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>354
                     /note="ultra-conserved element locus uce-5250"
BASE COUNT          107 a           64 c           64 g          119 t
ORIGIN      
        1 tttaatctgg attctgttct cttctcaatg tcagcctgtt tctggaccgg tatagagcta
       61 gccttgttga tgcaataaag agattactcc aacccagtgt aagtatgttt ctattttctc
      121 ctgaacactg gcttcagaat aattagtctg tgcacaatga ttgagagagt aatggaatgg
      181 caggattaat gtcatgtaat actttaatac ttattatgtc caacttcaat tgagtcttct
      241 aatctatcag attctttcct aatcataaac taggaaactt cttatacttg gccttctgat
      301 aaggaacaca gtgggtagta aaataaatga aaccgcttca aagatagcgt caga
//
LOCUS       KCPA01001419             686 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 155979tic ultra-conserved element locus
            uce-2037, sequence.
ACCESSION   KCPA01001419
VERSION     KCPA01001419.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 686)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 686)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..686
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="155979tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>686
                     /note="ultra-conserved element locus uce-2037"
BASE COUNT          200 a          113 c          143 g          230 t
ORIGIN      
        1 cttttaacat attatcttta ttctctgcaa tcattgccag ggtgatcagc ttagtataaa
       61 atccaagatc ttatgaggta gctgactagg gatttagaat tttccttttc agcttacaga
      121 aaattgtgta atctcatgca gactattttc tctttttcta tatcaatcct aaattaatac
      181 agtaggtgct ctgcagccag catggttttg cattgatctt ggccagcttg tttacagtgt
      241 tttggcaagt tgctgatgta cttctccctg gggatagagc aggggttaat tgctgttaaa
      301 ctctcagtgc caagtaatgg ttcagactct gtgctacatt aaagatgaca ctaataggga
      361 aagagtgcac tggatcgctc tgtgttgaaa attggacttg tggtgacaga aacttggagc
      421 agagctgatg taatagggag gccataatgt aattataact gcagaacatg tgtcatacca
      481 agttaaatga tacattaatg aatcaaaaca ggtgatggag tgttgctctt tcagcagata
      541 gaggtgtctt caaggtcaaa ttgtcattaa tctaataatc tgtaaactgt atatgcttca
      601 aattataagc aaaatcatct ttaatgggtg tatttcttgt cctgtaccaa aaagaccaga
      661 agctgctgtt ctcagtgtaa ttttgt
//
LOCUS       KCPA01001420             612 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 156089tic ultra-conserved element locus
            uce-273, sequence.
ACCESSION   KCPA01001420
VERSION     KCPA01001420.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 612)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 612)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="156089tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>612
                     /note="ultra-conserved element locus uce-273"
BASE COUNT          201 a          115 c          131 g          165 t
ORIGIN      
        1 ctacaaagct cattagtgcc agccttggtt tatcccccat gttgtgcatt tatctccggg
       61 atgcattatc aacatgtggc acatgtcctt gacatgcaca gaagagttgc accccaggat
      121 agcagcatgc atgacaatag tgttgactct tactccttta tggttgctgg gatgtaaccg
      181 agaaatctaa taactgtgac agtaggcctt taggtttctc cttgcttttc cagacagtga
      241 agctgcacag acactaatga aaggttaaat gaataggaat agctgacaag aggtacaata
      301 aagaagggac ttggtaatcc acagacactg agcagagatc cttggctcaa gccgagaaag
      361 gacagcacat cgtcgagtca caatatttaa aacagcttgc tatacacaga ggcttttgtg
      421 tctgggtaca tgtctggctt tggaagaaaa aaaagatact gaaaagaaat ttcagcatgg
      481 ggcactttgg caaatgtcag gtcacaaatg ttttttgttt gctgttacat ctttgtattc
      541 aacaaagaga attgactaag agcacaaatc aaaagttcca aaaaaataga tatttgacaa
      601 atataataaa gt
//
LOCUS       KCPA01001421             824 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 156200tic ultra-conserved element locus
            uce-1988, sequence.
ACCESSION   KCPA01001421
VERSION     KCPA01001421.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 824)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 824)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..824
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="156200tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>824
                     /note="ultra-conserved element locus uce-1988"
BASE COUNT          208 a          161 c          195 g          260 t
ORIGIN      
        1 tgtcttgttt tatgagcaag atcctgtttt tctatttcgt tttctttgtg cttttggtaa
       61 ggacagatct ggctctttgg atactaaata ggcaactaat tcaattggtg ctttctccta
      121 gggtctgctt gcaaaccagt gccaggctca caggctcttt gtgtactgcc ctccctgcat
      181 gtgtctgtgc tcccctggct agtcagtttt ttgtctgtga tggttaataa gctttgagcc
      241 tagtagtcaa atgtggtggg aacggggaca agacgagggt ccttagtgaa ggtgtttgtt
      301 gttaaataga acaattcagc tgtctcttta gaaaacttga caaaaggaaa tgctccctgc
      361 tgaaaatttt cttagcctgt tgcacaaaag atgaagtttg tttaagaaat tgctgctaaa
      421 gaaagcgtca acccattaag gtaattatat ggaacctgtg ccgtataaca gcttaattga
      481 tgttaatgtt tgtctaattg gtgattggga gagtgcaaag gactaaaggt cttcatagca
      541 ctttcagtca cggctctgaa aggggttctt ctggttttca cagttataac aatgcctgcg
      601 cgtctttctc agattacgcc ttgttttcag ccccttacag cattctgctc cactacttaa
      661 agcgtaaaat aagggtgaag agccattgtc taatgcagcc tttttcaaag agtgtttctg
      721 acagggattg ttctaggaat caggcaggag agaagggagt gtgagaggtg aaagccacta
      781 tcacccactt gtgtcacatc cccaatgagc ggcaagagcc gcct
//
LOCUS       KCPA01001422             601 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 156310tic ultra-conserved element locus
            uce-6049, sequence.
ACCESSION   KCPA01001422
VERSION     KCPA01001422.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 601)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 601)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="156310tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>601
                     /note="ultra-conserved element locus uce-6049"
BASE COUNT          123 a          163 c          130 g          185 t
ORIGIN      
        1 cccatgctgc ttctgcatgt tagtgcagtt agaaccccag gccaatctgt ttaattggtg
       61 ctaaggtctt ctggtccaga atgtcattta gaaatttgtt tgatggttat ttccttctaa
      121 ggtttgaaaa tgacagtgtt gcttgtttcc tcattctttt tgaaccctcg ttcctctgcc
      181 tagacctggt taaccatttc tgtgaacagg tcctcaattt tttactttgt ccctactttc
      241 ctgtcgtagc cccatcttcc cctggtgtcg actccgtacc cttacagcgc acaggcagtc
      301 aacacggcac acagaacgca accgcgacct tccagagggc cagctatgcg gccggcccag
      361 cctccaatta cgcagacccc taccgacagc tgcagtattg tccttctgtt gaatcaccat
      421 acagcaaatc tgggccagcc atcccacccg aagggacctt ggctaggtca ccttccattg
      481 atagcattca gaaagatccc aggtgggtga aaccttctct tttatttctt gctcgtgctg
      541 aggtttgtaa ttgcagttgc tttgcgtgtt tctgctgttg gatattggtg gtacacggaa
      601 g
//
LOCUS       KCPA01001423             480 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 156418tic ultra-conserved element locus
            uce-253, sequence.
ACCESSION   KCPA01001423
VERSION     KCPA01001423.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 480)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 480)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="156418tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>480
                     /note="ultra-conserved element locus uce-253"
BASE COUNT          130 a           99 c           82 g          169 t
ORIGIN      
        1 attgtcctta ctaaatctgc ctgagtgttt ttgctggatg agtgctcttt gtttctggaa
       61 ggcagaggaa atgcaggcct ggaaacacca accagtacaa gtccacctct catttgtctc
      121 acttttataa ctttgaaact cttccttcac tttggtaata atgtaaagta tcaactaaaa
      181 attgcaatgc atgcatttca tttgagtttt attgccttaa cagacagcat tagattacaa
      241 aagaggacat ttttcttctc agttttagct tattcttatg atttatgatt agatacagca
      301 agagttcata aacttccctg acctgctgac agtttttaca ggctccttga tttatttcca
      361 tctcaaactt aacagctttc atgtgactga tattcctaga gtcctggcat ggctgcagca
      421 caggctgcaa gagctcctct aatctccatg ttactaattt aaatgaagtc ttggtctgtt
//
LOCUS       KCPA01001424             445 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 156520tic ultra-conserved element locus
            uce-5646, sequence.
ACCESSION   KCPA01001424
VERSION     KCPA01001424.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 445)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 445)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="156520tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>445
                     /note="ultra-conserved element locus uce-5646"
BASE COUNT          125 a          101 c          122 g           97 t
ORIGIN      
        1 ccaaggatta cttttgcagt gcacacacac acgaagctca aaattttttt tacagagttc
       61 cagctctggc tacggcagga gcgagggcct gcacccccgg cattgtgcca tcagattcaa
      121 acagggaaaa ccattaccct agtgtcttct aactccctct ggagtttgtc agctttggtc
      181 ttttcaaaga gcaggctctg ttcaagctcc ttaatgcggg catgctccag tttggtctgc
      241 gtctgttagt ggagagggag aggaagagaa cacaacggtg ccaccatcac atgccagcac
      301 aagaggagga gccacatgca ggccgtgctg ccagagcctt ctggtgagca gagaggatgc
      361 aagtggacag ggaaatatgg atgaggcaaa cggagagaaa agaagtttca tgcagctgag
      421 tagaagagca caaattagaa tagtt
//
LOCUS       KCPA01001425             472 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 156624tic ultra-conserved element locus
            uce-4832, sequence.
ACCESSION   KCPA01001425
VERSION     KCPA01001425.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 472)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 472)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="156624tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>472
                     /note="ultra-conserved element locus uce-4832"
BASE COUNT          152 a           78 c           80 g          162 t
ORIGIN      
        1 tactcagttg tcagaagaca caaactgatc cgagttcact ttacaaatat taatacagac
       61 ccggaagata aatgtatgtg aaccctgata acctcctgta acattgtgct gccttgtaga
      121 tggtaatgtg agttctctca gtatttatgt tgaaatttct aacattcaac ctagtcctta
      181 ttctgttaat ttaataataa aagatgcttt atccatttgt gcaaaggtaa acgcagattg
      241 tatctttttt aatggtacgg cataaaaaaa gtaaccctta aatgaagctg ctctattact
      301 atagagtact ttaacatgta tagatatctt gtaaacttgt attgtggatg tgtaaataat
      361 acgttctttg ggtttttaac accgcatgta aagtcaaaat aaaatattcc catgtataat
      421 ttcattatta gtgcagttac cgtgggagaa atctctgctt gcagcagctc ag
//
LOCUS       KCPA01001426             546 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 156730tic ultra-conserved element locus
            uce-3033, sequence.
ACCESSION   KCPA01001426
VERSION     KCPA01001426.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 546)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 546)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="156730tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>546
                     /note="ultra-conserved element locus uce-3033"
BASE COUNT          162 a          111 c          155 g          118 t
ORIGIN      
        1 gacaaaaaca gctgttcctt ctttgcacaa aagatgtttc cttgaagaag gcattaggag
       61 tctcttattc tagaagagaa aagactttac tgatgatgag ctctggcaat agtgatggga
      121 ggcaaaagga tatggtggtt aacagaggga ctggatgatg ataggcagag agaatgagag
      181 caacagatag gagagggaga ggggtgggaa gcataggtga ggaagtgagc caggacaaga
      241 cagcgtgact gtgtctgatc tacactgacg agtaccaatg ttaactgtca cctctcatct
      301 ccaaactaaa tcacgcctgg aattggaggc agcaaggagc tgatagagtc agccttagag
      361 agccgacaag tcaatcagag cggagatgca tggagagaca ccagctttat agggctcggt
      421 gccttcattc atcgcaggat ttacacctgt caggctcctg cggggggagc gcgctgggac
      481 tcactttggc accacttaaa atgggacaac agacacatta ctgcaatcac cctctgcttt
      541 cctgtc
//
LOCUS       KCPA01001427             553 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 156839tic ultra-conserved element locus
            uce-5906, sequence.
ACCESSION   KCPA01001427
VERSION     KCPA01001427.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 553)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 553)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..553
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="156839tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>553
                     /note="ultra-conserved element locus uce-5906"
BASE COUNT          149 a          138 c          124 g          142 t
ORIGIN      
        1 caaggagtgc cacatcatgt gagacgtttc atctccacga gtaacctcgg cattgttgca
       61 aacgaataca cgaatacagg acagccagga gagatgaaac gcattgaccc ctgcccctgc
      121 tcaccacaca aatgtcattc ttttggaatt ttatctttct tgttttccca acacattttg
      181 gtcccctttt cacttctccc cttttccctt aagtagagat gacacagatc aatacctttg
      241 atggaaagta ataatcaggc ctattaagtg acaaaggttt actctgtaac agctgtgctg
      301 gcgggagagg agagcttgtc tgactaatga atcatgaaac aatcaggcag tagccatttg
      361 tgtttagatc tgtaaatatg gtgtggttca agtgccagac catctccagc actccagctg
      421 ggggcacaga tggtccacat tcagtacagc acaagtgtaa agaaaaggct ccctccttcc
      481 cctgtcccat agtgcccctc ccaaaggaga gagcagccag cttggggatg cacttgggct
      541 gtgggcagga atc
//
LOCUS       KCPA01001428             459 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 156948tic ultra-conserved element locus
            uce-2213, sequence.
ACCESSION   KCPA01001428
VERSION     KCPA01001428.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 459)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 459)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="156948tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>459
                     /note="ultra-conserved element locus uce-2213"
BASE COUNT          148 a           82 c           94 g          135 t
ORIGIN      
        1 ttaagggcta tttttggact ggaaatcatg tgacttaaga tgttataaaa ccgcttcacg
       61 tcaaatgata agcacagttg aaatctcatc agaattacct gtctcgcctt gcatttagaa
      121 ctgaagactg tccattcact atggaatgat gagttattgg tggtgatgct ttggaagtgg
      181 tggaggaggt agtagaggag gaattgttag tagtgaggtc tagccctcca tgtttaatgc
      241 cattgtcttc catactgtga actccagtca cttctttcca taactgctga atctcagcag
      301 gacttaagcc agctataaaa tgaaagagag ccccactaat ataacaaaac aaagagtttc
      361 atataatgag ctcagtgtta ttaatggatt aatgccaaca ataaagctga tgctgtttta
      421 ccagcacaat caacatgtag taaagaaatc cataaattc
//
LOCUS       KCPA01001429             419 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 157166tic ultra-conserved element locus
            uce-6413, sequence.
ACCESSION   KCPA01001429
VERSION     KCPA01001429.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 419)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 419)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="157166tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>419
                     /note="ultra-conserved element locus uce-6413"
BASE COUNT          133 a           66 c           97 g          123 t
ORIGIN      
        1 agggtattgt ttaaaaccgg tgttaaaaga cggcgatatc agggggcaca tgacttttat
       61 gatggaactg cagatgggag ggaactgtga attggtttac tctgacagcc aaacctgaaa
      121 gaaaggaaag atcagaaata tttgaaaatg agatcataca gcatgtgaac tatacagaca
      181 tctctaccat gtttttttta tgagaagtct tactgacatt tgaaaagcag ggaccggttc
      241 cctagtctta aggttgactg acatttaggg gcagcgtaag gcgtgatttg cttcccctat
      301 ttttaaattg aagttttcat aaattggggt gaaggagaag cctggttacc tcttgcaaac
      361 cattcatatc tgtgtagaaa tatgaaaaaa gtaacctgtg acattttaaa cactttgct
//
LOCUS       KCPA01001430             859 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 157277tic ultra-conserved element locus
            uce-1101, sequence.
ACCESSION   KCPA01001430
VERSION     KCPA01001430.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 859)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 859)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..859
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="157277tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>859
                     /note="ultra-conserved element locus uce-1101"
BASE COUNT          261 a          139 c          211 g          248 t
ORIGIN      
        1 tatacttaaa gaaaaagaaa ttctgcttgc tgtaacatga aatgtaaaac tttctacctt
       61 gagcaacaaa cccatctgtc aaagctagtc tgtaaagcag agccccgctg gatgatctga
      121 aaacagctgt gctgtattcc agactggcaa gtctttgggt aatgtttatc aacacgcaac
      181 gggttgcgta tgtgctgaga agtttagccc caaagaacaa ctttgcaaag gcagaaggaa
      241 atggagacct gccaagcctg ttggctggag tcatggacaa gagcaaggcc tgtctgaact
      301 gccactcagt ttttattctg cgagtttgca gggttggtga ttagagtggc tttcgcccaa
      361 ttatgctgtg attattccgc tgcactgtaa ttgactgggg agatatgcta atacctgtca
      421 tttgggatga taaaagatga gcggaggacg caatgcatta tttagctggc tgtgtgatag
      481 atgagggatg cgcagagtac tttaattgct gagaagagag gttaagctga acgaacggat
      541 gaattagaaa tgagtttttt tatggcttgt ggaaaagtga aataaaggga aatgtgcttt
      601 aaaactgtag cagcagatag aagcaaacac gacaagacgc ggtcttttag gcagcttact
      661 ttcttaattt aaatatataa gacaaaacac ggttcagtgt tcagtaaata atagtaacaa
      721 ttataagaaa tgcttggtga gttcatatcc ttgccaacaa aatcattgta gttttcgttt
      781 gaggtgaaat ttggttgttt ggaaccttag caatttcatt gcagttcagg ctgttaaagc
      841 ttgtttctaa gggctgtag
//
LOCUS       KCPA01001431             465 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 157383tic ultra-conserved element locus
            uce-2475, sequence.
ACCESSION   KCPA01001431
VERSION     KCPA01001431.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 465)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 465)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="157383tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>465
                     /note="ultra-conserved element locus uce-2475"
BASE COUNT          175 a           72 c           76 g          142 t
ORIGIN      
        1 ctatatgaag gcattatcac taaatctgaa aagaaaatat tacaggcaaa aattataagg
       61 agaagtttat aaaacaaaga tatcctttgg cagaatatgc tcttataatc aagcttttag
      121 cataccatag tttaaaaaaa ataaaaattt tgcccacata tacactaata aaaataaatc
      181 tgtttccgat tactaactat gcagcacagg tgcttgtttg ttacgagaga ggcatgttca
      241 ttaattttca gctatgaaaa gtgcactgtg ccataaatat acaattcaaa atgtactgct
      301 gataaatgaa tacacagatt gttaatgtgc cagagtaggg tattgggcat aaaacacatg
      361 ccaaacagga gcacattggt gatgtgctaa tgcttttaaa tctgggttta atgtaggcac
      421 ataaccagct ttttacatta ttgcactaac ttttaccaga attta
//
LOCUS       KCPA01001432             563 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 157490tic ultra-conserved element locus
            uce-1918, sequence.
ACCESSION   KCPA01001432
VERSION     KCPA01001432.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 563)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 563)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="157490tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>563
                     /note="ultra-conserved element locus uce-1918"
BASE COUNT          176 a           81 c          119 g          187 t
ORIGIN      
        1 gctaagtaga tttggtaaag aaggacaata aaacagcgaa acagttaatc gccgtgctaa
       61 ttatttgtcc tatttttctt aatacaaatt aaatgtttca cttggttaat gacaagtttg
      121 atcaaacagt ttcataaact gatggattga ctttgaaatg aattcagggg gaaaaaaatg
      181 acatgatgca gatttggcag agggccgtct ctagtgggaa cagatgccca acaaatttgg
      241 cgactagttt tgttctcttc tatctgttgc agttcacaat cctaatgaat gttatgttta
      301 aataacatga ataaagataa agtgaaaatg aattcaactc cagtttgagc agcagaatag
      361 aaatgagcaa actgtattat cttctgccac ctaatctggg ttgaatttcc tctgtatctt
      421 tttttgtttg ttgaagaatc cttttcttga gtctccttgg ccattgacaa ggtcttttga
      481 gatgaatatg aaaagataga tttaaaggtt aaggccaggg tcagatggtt gcagatgttt
      541 tgtgagagat tgttcggttc agt
//
LOCUS       KCPA01001433             352 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 157594tic ultra-conserved element locus
            uce-3070, sequence.
ACCESSION   KCPA01001433
VERSION     KCPA01001433.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 352)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 352)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="157594tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>352
                     /note="ultra-conserved element locus uce-3070"
BASE COUNT           95 a           77 c           67 g          113 t
ORIGIN      
        1 cacaagaagt gttttatgca cttgtaggag caattacagt tctgtactgc aaggggagct
       61 gttggcacat aataccatga ttgtgcatta gatcatccac tggctcctgt aatatccact
      121 tccagctata aggagtcatg tttcaacacc tctgattccc tggtgctgac aagctaaaca
      181 acttgttttg tctctgtgag ctcttctctg gtgattaact gcttatggtg aatactaatt
      241 atatggaagt acagtacagt agagatactg tcctacttct ctctgtcctc ttcttgcact
      301 ataaattcag caagaagatg acatttttca ggaccacaaa taggtctctc ac
//
LOCUS       KCPA01001434             527 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 157693tic ultra-conserved element locus
            uce-121, sequence.
ACCESSION   KCPA01001434
VERSION     KCPA01001434.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 527)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 527)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="157693tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>527
                     /note="ultra-conserved element locus uce-121"
BASE COUNT          159 a           65 c           99 g          204 t
ORIGIN      
        1 cctttgttaa atgtatggat gcagacgcct tgatgaagat cttaattttg gtttaaaaaa
       61 tagtgaaaat gtacaaaata tctatcacta ctgataggag gtaatatttc tgtgtagaaa
      121 tgaaaaaatg gtttgttttt agtattagtg tagatgtaca cattccagca aatgtatttg
      181 caattatgtg gtcaatgctt tgtgatataa atgtactttt tcaatgtata ctttatcact
      241 tttaaaatgc ctgttttgtg ctttacaata aataatatga aacctcctgt gtcggtaagt
      301 tggatatgtg ggtatatgca gaattatagg attgatttgc aacgctgact caaggtacct
      361 gtacacaaag ataaatcttg ttgagtttga aaacttgtca ttagcatgtt tttcttgcag
      421 aatagctgta gatggaggat ctttcattca ttgtattttg ctgccagtaa tcttgatttt
      481 tctttctact tgattaaaac tgcatgtgtt taagaagatg atctttt
//
LOCUS       KCPA01001435             481 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 157802tic ultra-conserved element locus
            uce-980, sequence.
ACCESSION   KCPA01001435
VERSION     KCPA01001435.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 481)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 481)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="157802tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>481
                     /note="ultra-conserved element locus uce-980"
BASE COUNT          168 a           83 c           75 g          155 t
ORIGIN      
        1 gaatggatat atccagacag ctgatattgc ccattactac acacattttt gtttattgaa
       61 tattgttgtg gtttacagat ttaatagacc caacactgga agttctgtga gttgtaacca
      121 ttttttgatc ttcctgattt gccaggttca acatcatttt attgatacca aagtgaaaaa
      181 tggcctgtgc ttacacttac aaggatctca gatgaatgtt ctgactgctc aacacggcaa
      241 gaaatttcac tttcacagtc aacaagtcat cttactcagt agaacacaaa agttaaatgg
      301 tttgtaactt caatattagc aaggaaaata cagtacaaat tactaaaaaa tactaaaata
      361 tagaattgtg gtcaggtatc cccactacat taatcgcagc agtagcctga aatttgaaac
      421 ttttaataaa aagttcttaa atataaatta tatggcaaat gtacagtaca ttgctttgtc
      481 a
//
LOCUS       KCPA01001436             433 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 157908tic ultra-conserved element locus
            uce-7829, sequence.
ACCESSION   KCPA01001436
VERSION     KCPA01001436.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 433)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 433)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="157908tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>433
                     /note="ultra-conserved element locus uce-7829"
BASE COUNT          141 a           69 c           68 g          155 t
ORIGIN      
        1 atcttgtaat tgaagtattc ttgctgtatt cataagcctt tattccaaaa agtatcctca
       61 tgcaaataga ataaatcaca ttgcaagcct ttcagaaatg ccattttcag actctacctt
      121 ctgatgatta ctgttctctt ttttctgtaa agttctatag agaatatatt ttaattagct
      181 tccacttgat accacttcat acagacggcc cagatttgac ccagtgtctg atcatataga
      241 atacattaca aaagaactgg tcatttgagt gctttaatat agctttgcat taatgtgaga
      301 catcatttag acaaggcatt aaaagtgtta ttttaatgac tgaagtgtgt agggtgggaa
      361 gaagcttaat ctttatagga agaacaattt caattagctc taaaatatta atttgttggt
      421 ataactatat act
//
LOCUS       KCPA01001437             351 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 158021tic ultra-conserved element locus
            uce-7175, sequence.
ACCESSION   KCPA01001437
VERSION     KCPA01001437.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 351)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 351)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="158021tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>351
                     /note="ultra-conserved element locus uce-7175"
BASE COUNT           84 a           74 c           93 g          100 t
ORIGIN      
        1 aagccattta atgcagacaa aggttgtatg aaaatataat tctgcttttg ttagcagcca
       61 tcaaactcta aaaagcgtca cttttgtttt cttgtaacat tgtgaaaacc tcgtgtcgga
      121 tcgagagctg gggccctctc gactaatcgc ctctcctttg tgtttttaga ttataggggc
      181 aattagtgtt gtcaaaacct ctggcaattc tctttgctct tgacagggtg tcagtccgct
      241 gggcgagaaa tggaaggtgt tataactctc cggtaattag gatgcctccg atttgaaaat
      301 gccagcaaac gtgttcgagg ggccgcggga gggggcgggg agcccgcccg g
//
LOCUS       KCPA01001438             243 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 158121tic ultra-conserved element locus
            uce-2157, sequence.
ACCESSION   KCPA01001438
VERSION     KCPA01001438.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 243)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 243)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="158121tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>243
                     /note="ultra-conserved element locus uce-2157"
BASE COUNT           80 a           39 c           74 g           50 t
ORIGIN      
        1 ttatttaata gttcaagctc cttatggaac atttggatcc tgatgaagaa gaagaagatg
       61 gagaggtgtc agctagcaca aatgctcgga acaaagcaat tacctcactt cttggaggag
      121 gcagccctaa aaacaatgca gctgagacag aggacgatga aagtgatggg gaggatagag
      181 gaggaggcac ttcaggggtg aggcggagga ggagtcaacg tatttcgcag cgtattacgt
      241 aaa
//
LOCUS       KCPA01001439             530 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 158231tic ultra-conserved element locus
            uce-4578, sequence.
ACCESSION   KCPA01001439
VERSION     KCPA01001439.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 530)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 530)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="158231tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>530
                     /note="ultra-conserved element locus uce-4578"
BASE COUNT          151 a           90 c          104 g          185 t
ORIGIN      
        1 ttgcttcctt ctcccaacca accaagcagg ttgctgaaat tgtgacaaat gctcacactt
       61 tatggaataa aaatcgtatt caatcttttc aaggtgctca gaacgcttcc agtgaattgt
      121 gtttgcaggc ttccatccaa actttttaat ggaattccaa ttgaagctgt ctctaatatg
      181 tatcctgttc acggctttcc tttgcacagt ataatggatt ctttaagctt tgaaagtgag
      241 ttgttgtggc ctaaagtaac aaatcagttt tggaatgctg tctgttgtaa atgatttggg
      301 ggtaataaat tttctggtac aaagcaatag gcagagtttt cataatgttg aacggtttgg
      361 acttgtcttg aagggaacaa tgtcgcgaaa gcaatgtgct ggttccaact atttgttatt
      421 ataaaagaca atccttaagg tagaatcctc atcagatttc atgctttgct gtgacttgtt
      481 ttattcctag acaaataaaa atatttgagc atagttgtgt atctgttaca
//
LOCUS       KCPA01001440             524 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 158340tic ultra-conserved element locus
            uce-3111, sequence.
ACCESSION   KCPA01001440
VERSION     KCPA01001440.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 524)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 524)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="158340tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>524
                     /note="ultra-conserved element locus uce-3111"
BASE COUNT          128 a          124 c          105 g          167 t
ORIGIN      
        1 tttttaactc agccagaaaa ctggagggct cagaaacagc acatactgct ccagaggttt
       61 ctctacagta aaatggagtc ttttccacag aagacacagg acatccacag agttgggaaa
      121 gaatgtttta ggaaagtctg ctgaattctg tgataccatt tttccatgtg tttgtcgtct
      181 tcatgtctat ttaaaaccaa actctcactc accttagatt tctcctgatg cagctcaatt
      241 tgaatgtctg ttagcttagt cctgagttcc tcattggcag cctgtagggc cacaatcagt
      301 gcctcaggct tttcgccctt gctccgtcct ttttttgaca tggtttctta tcagcagagt
      361 ccacgtgttt atttcaaata tggactgcca tctttttctg ctcctttcag tgcccgcaac
      421 tactgtgtga cattctttaa ggtcctggac tcagctgctt tggaaggaga agtaaggaca
      481 tatgtcagtg gacactgcat ctggacatgc ttaccatctc caaa
//
LOCUS       KCPA01001441             531 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 158449tic ultra-conserved element locus
            uce-5371, sequence.
ACCESSION   KCPA01001441
VERSION     KCPA01001441.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 531)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 531)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="158449tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>531
                     /note="ultra-conserved element locus uce-5371"
BASE COUNT          130 a          114 c          125 g          162 t
ORIGIN      
        1 cgttagcgtg tggtgcaaat ggacacgagc ccctcaggaa acggtgccct ctgcgtaacg
       61 ggcgcttcca cgtggaactg gcaccacgct cgtcctagct tgggaaaggt tttcaggtgg
      121 acactcaaga ctctgattca gcaaggcaaa ggtccttttt ttctgtagct taaaaacctg
      181 ctgctgtttt ctaggtgtaa agcaccaaga ctcacagaat tctttcttgg catttttgaa
      241 tgcgcctacc tctgctctgg atcaatttga agtaagtgag tggaactgct gtagtgtgca
      301 ggttctgtgc atatctgctg agagtttgct actgtattgc acccataata tttatcattt
      361 acagtgctgg ctgtcttctc ttgaatgctt cagtgaattc tcccttgaat gcagaaattt
      421 gcctgatgca gtgaacatga aaagcatagt tgttcaaatc actctttgtg ttcagaaaaa
      481 tgcgcagtgg tttggtgaaa acaggaaatc atccttgatt gtatcccatg a
//
LOCUS       KCPA01001442             460 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 158558tic ultra-conserved element locus
            uce-7654, sequence.
ACCESSION   KCPA01001442
VERSION     KCPA01001442.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 460)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 460)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..460
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="158558tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>460
                     /note="ultra-conserved element locus uce-7654"
BASE COUNT          155 a           82 c           86 g          137 t
ORIGIN      
        1 aaaagccaga agccttatgg agtgctgtta aatattgtct cacaggtggg cctttcttaa
       61 aataatgaga agtttcatgc cagttctagt cccattgagt atttacacct tggacagctt
      121 tgctcacaag aagtagaaaa cagatacaat acatggcttg aaaaatgacc agagtatgca
      181 cctatagtac tgtacactaa ataaaataca caaggcagca atacttaggg gccagaaaca
      241 ctgcttacta caagtcagtt atggaatcat aatttacagt aaaaatgggc atgtcccaag
      301 gctcaatttt gttttctttt gtcatttaca gtagaataaa tatttgtcgc tattgctaca
      361 ctttgtttac attctaacct agtaaatgca gaaagctagt taaagcatat agattacgtg
      421 taggtcccat acgtatgaca gtttgttcaa gactagtagg
//
LOCUS       KCPA01001443             500 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 158665tic ultra-conserved element locus
            uce-1081, sequence.
ACCESSION   KCPA01001443
VERSION     KCPA01001443.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 500)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 500)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..500
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="158665tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>500
                     /note="ultra-conserved element locus uce-1081"
BASE COUNT          143 a           96 c           98 g          163 t
ORIGIN      
        1 acacgcattt acttaattgc aatcttgaat gaaattgtcc gtcataaaag atgcctcgag
       61 aatttcgatt tcagccgtct gctcctatcg tttgtcttaa ttttatttca ctaccactaa
      121 ctgtaggcac tacctcagaa atattttgaa tttagtttta attgtacagc tttcaactca
      181 cgcaacattt ctctttgtgt tgaaagcatc acggtgattt atcctcatta ttgtgtaaat
      241 aggtttcggc agttctcagt aaataaaaca aagagtgaca ggaggagaag ggggaatttg
      301 ctttcctacc aattagagta gccttaggca gtacttttaa gaggagataa atcctgcaaa
      361 tcactaaaat gatcctgtca catgcaccaa atattaaaat cacacagcgg cgcacttcat
      421 acagtttgct ttggtttaat gagttggggt gggcttcgtc atgaggtttg catctcgcag
      481 ttggggactc ttgattgaca
//
LOCUS       KCPA01001444             542 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 158773tic ultra-conserved element locus
            uce-2446, sequence.
ACCESSION   KCPA01001444
VERSION     KCPA01001444.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 542)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 542)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="158773tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>542
                     /note="ultra-conserved element locus uce-2446"
BASE COUNT          177 a           86 c          106 g          173 t
ORIGIN      
        1 tttaagtttc tgactccttt gcaaacagga atgtgtaggg aagatgagaa gaagtagcac
       61 cattgagatt aaagggacca aattttacca gcaatcacag caaatatctg acttgcttaa
      121 gtgaagccaa ttactgtatt attgcctcct tttgcactat gcacagtagg gatgtcactg
      181 gataatggtt tgcatgtaga gttaatcact ttgatgcatt tctgactgat cccagcaaat
      241 tatgttttgg ttccactata ttaaacacaa gagcagggga ttatcattaa taaatctaag
      301 gcacagcatg cataaatctt gaataaatca aatatcaatt acataggcag tatctgctga
      361 catctgcttt catcaaataa tatatttgaa atagatttta ttccactttg ttggagtcaa
      421 aggaatgtta gattggtgtg caaagatcta aagagttggg ttatgtagga gtgctattgc
      481 ttgctgagca acataaaaca gctttttaga cataaatagc ccattggttt catagactag
      541 tt
//
LOCUS       KCPA01001445             775 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 158885tic ultra-conserved element locus
            uce-417, sequence.
ACCESSION   KCPA01001445
VERSION     KCPA01001445.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 775)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 775)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..775
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="158885tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>775
                     /note="ultra-conserved element locus uce-417"
BASE COUNT          224 a          189 c          143 g          219 t
ORIGIN      
        1 gctgagatgc ctcataccta caaccgatct gttgctttta caagtttaat ctcggtatta
       61 aggagctgat tgtggaacca tgtcgctata acatcttcaa cccagctgta catcatataa
      121 accgctatag gagggggcag tctcccatca ttcctggcag cagcacatac ctttaactcc
      181 ctaatctgta atactacaaa ataccgctct catttcttcc caagcacaag tggactacca
      241 gcaagggtcc aacagtgtta ttcctaatta cctttttttc actcttgatc ctgtggcgct
      301 cataattagt tacctggggc tgcaatccaa tttgaagtga tgacaagaaa gtgatccatg
      361 aaaaagtaat aagttaaatc caatttcagc cttcctctaa ttaaatgcac atggaactaa
      421 tgactcaaac cctaccattt cagtgataat ggtaattagc gaggtgggag tcactctctt
      481 ttttcaacac tgtaggtgta aaccacaagg taaaatggca ggagcactct taattacatg
      541 tgtcattttg tcagcaattt acacatttct gaccagtcag gaaggtttca tttgttttcc
      601 ccttccccga ggtgggacgt tcaggctctg gcactgccca ccccacatcc ctgctcccaa
      661 cctgggcaga aatcacaaca aacctgttct gtaaatgctt aatgtcaaag cagaaaacct
      721 gcaagaaaat gatactcggg gctctaacaa gaatgaggga tcttggcttc tactt
//
LOCUS       KCPA01001446             782 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 158996tic ultra-conserved element locus
            uce-351, sequence.
ACCESSION   KCPA01001446
VERSION     KCPA01001446.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 782)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 782)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..782
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="158996tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>782
                     /note="ultra-conserved element locus uce-351"
BASE COUNT          243 a          155 c          138 g          246 t
ORIGIN      
        1 aaagaaaact tctgcaaatg taatagttca aaggagataa agcatattta cattttaaca
       61 cagctgcttg aggttactgt gatggcctcc tgaacttaca tcttgctgtt cttgtgttat
      121 aggaggaaaa agggctgatg tgagaacaaa gtactgtcag caatctaccc tttaaactgc
      181 ttagacctgg aaggcacgct cattgcttta tttctctgct catttttctc caagattggt
      241 acatctgaac tacctttcca cagatctata cagcaccact gctcagcaag aaaaagagag
      301 ttatattttc cccttgagtt aggacgcctc atgacaaatg ataatggata atcaataaac
      361 tgggaaatat gaggccacaa actttatgaa gccaagagac atattacttc tgaacaacac
      421 tcatttccct taacaaagtc actactagac tgtgcctaat aatctgaaag aaaatcaaag
      481 gacctgcaac cacatcagca atattggcaa cttattccac tttaatggca ttttgattga
      541 tttttctgcc taatggtagt tttatactgt agatttgacg ctgcttctgc aaaatagttg
      601 tgtgtaataa acatccccga aggcaaacag tgaacattaa ggttcttgtc ttactaggag
      661 tcataattga agcttgacca acattgcctt tggccttttt aaagaaatct tttgcaaaag
      721 ctatcccttt ctgcttttcc tttctgtgaa ggacttgata tgtgatcaag gcattttgtt
      781 ta
//
LOCUS       KCPA01001447             691 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 159108tic ultra-conserved element locus
            uce-3957, sequence.
ACCESSION   KCPA01001447
VERSION     KCPA01001447.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 691)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 691)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..691
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="159108tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>691
                     /note="ultra-conserved element locus uce-3957"
BASE COUNT          224 a          101 c          115 g          251 t
ORIGIN      
        1 tcaaatacat gaactcataa atgtttgaat tttatgacct ctgagtcatc ctcaatacaa
       61 tttgattgcc ttagggtgca ttgagctgtt gcaaaataca ggttgctttc agaagaatca
      121 cagaagaatt aattttaatg taattttaaa tgtaagcttg tcaattgcat ttttgacttg
      181 tattaaactg cactatgaat attacacagg taaaatattc agtgttatgc tatggctact
      241 gcaagcattg attaaactct ccagtgttca tgaaggctga cagggattca aaggaggaaa
      301 tgtaaaactt gaaggtacag cagtatagtg acatttcact ctataaagct gccaatattt
      361 taatcctgca cgtaaatcat tttcatcagt ccaattccat atcttaattt gtgtagcaaa
      421 caaagtattg gattgcatta tgtttaataa ttaagaatgt gatatcaatt tccacatatt
      481 ttgagttcct ggacaggaaa tagagctaac atttttagtt tcaatttgtt tgctttacaa
      541 aataagaatg attaagtatt aggtctaatt ttcatgctgt gatcaaccaa actttctttt
      601 ataaaacctt tagtttcttt gcctaagtga tgtcttcgtc aatgttcatg ttgtattcat
      661 ttagagtgat gattgatatg gtaatagata c
//
LOCUS       KCPA01001448             428 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 159215tic ultra-conserved element locus
            uce-3214, sequence.
ACCESSION   KCPA01001448
VERSION     KCPA01001448.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 428)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 428)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="159215tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>428
                     /note="ultra-conserved element locus uce-3214"
BASE COUNT          118 a           76 c           88 g          146 t
ORIGIN      
        1 acttgcttca cctaagcttg gagctattta tggaaattac aatattcatg tgtgagagct
       61 tcagtcaaag tatcaggatt ggtttgagag gaaaatttcg actgaaagct tgtaattcac
      121 atcgttctct tctcagcttg gcaaagttga aggttaacat catctgttct agacatttca
      181 gattagtcac agaacttttc ttggtggttc agtgcctggt catccagtca gaggaacagt
      241 aatccatatg gaaaaattag ctcaatgtta ctagactggt ggttaatact tgagccttag
      301 ttaggattgt tcgcagcatc ttgggactct tttcttcctt gatcaatttc ttaaaatagg
      361 attcttcatc agaggctgaa aagaggagga ctgtactgaa gtatattttt tccatcaccg
      421 actctttt
//
LOCUS       KCPA01001449             289 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 159318tic ultra-conserved element locus
            uce-1233, sequence.
ACCESSION   KCPA01001449
VERSION     KCPA01001449.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 289)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 289)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="159318tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>289
                     /note="ultra-conserved element locus uce-1233"
BASE COUNT          120 a           49 c           40 g           80 t
ORIGIN      
        1 acccaaagaa aaataaaaga tcaaattaag tgcctctgtt ttgaacagag cacataagca
       61 ataataaata gtgactccca tagtaaaaga taaaatttca agttacgaca aacagctttc
      121 attacaggaa tagaaaaggc caataacaaa atattctgca ttgccattta caaaaaagta
      181 ttgactcaag cgggctttct ctttaatatg ctttgcatat gaaattcttt ccaatctaaa
      241 tataaagcac catttagttt ttggcaatga aaaaaactgc aaaacggtt
//
LOCUS       KCPA01001450             390 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 159425tic ultra-conserved element locus
            uce-7476, sequence.
ACCESSION   KCPA01001450
VERSION     KCPA01001450.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 390)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 390)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="159425tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>390
                     /note="ultra-conserved element locus uce-7476"
BASE COUNT          118 a           87 c           59 g          126 t
ORIGIN      
        1 agactagaac aaaccatctt ccaacacagg tcatgggact ttcctgacct cttgccattc
       61 aactttttat ctgaatccca ttcttacctc aagttctgtg gtgcttcacc aaacaaactg
      121 caaatttctc taatttgttt cagtgcagga atgacccatt tgtcatttgt gcgaagttct
      181 tctataaaac gatctatcca ctggatcttt tgtgtatctc gatccttaaa gaacagatca
      241 agcatatttg cttccaagac agaaaaagtc aaacaaatat tggagttctg aagcgtaaaa
      301 gcataacaga agtatctgaa gctaccagtg tgtcagaaac tccctgcact caagagtttt
      361 taaataattt gctctctctt atttatttct
//
LOCUS       KCPA01001451             591 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 159534tic ultra-conserved element locus
            uce-1492, sequence.
ACCESSION   KCPA01001451
VERSION     KCPA01001451.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 591)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 591)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="159534tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>591
                     /note="ultra-conserved element locus uce-1492"
BASE COUNT          145 a          124 c          127 g          195 t
ORIGIN      
        1 ttctcaagca aggtctgtaa taagaacact aaaattttaa catactctat tcacggccat
       61 gttgaatccc atgatagtta atttttcctg acagactcgg tcctggtaat gaacaggtac
      121 ttgtcagact tgccacagtt gttttgggtt ctctgtcagt ttcagcagct gggggtcagg
      181 gggtgtattc agcggagacc gcaagacaga cggctgtcat gtccttttcc tgcagattca
      241 aaatggtgaa cagaaagcct acgtcttgaa aaacaagcag ctgacagggc caacaaaggg
      301 ggtcatctat cttgaaatag atgtgatttt taatgctgta agtcttaact ttttttttgt
      361 actgctaaag agttcagttt catgaaagct tttgttcctg atttgtagag aatttctgtc
      421 attcctcatt ttctctaagc cttgatgtat actacagaat actcttctgc cacttcttgg
      481 cacacccact cttttgctgc tgcttattgc tgctgatgtg cagagcagca actcttgtct
      541 ctgtgtatgc ttatgtgtcc cgagcttggc agccatgact ttgaaacttg g
//
LOCUS       KCPA01001452             626 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 159643tic ultra-conserved element locus
            uce-2462, sequence.
ACCESSION   KCPA01001452
VERSION     KCPA01001452.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 626)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 626)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..626
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="159643tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>626
                     /note="ultra-conserved element locus uce-2462"
BASE COUNT          196 a           95 c          140 g          195 t
ORIGIN      
        1 ttatcacgtt gtgctgttaa ggtagagcaa acagttacgt gcttctttgt tgtcaaaact
       61 ggattggaaa atgatctaag gtgcatcttc ttgcctgatt ttgtatttta aaagaaaatg
      121 acataaagag gacgagtttg aagtctggca agtcagaaat tatgcttatt ttaagggatt
      181 cagtttaatg gtagagaaat gtcatgtgta atacttacaa gcattatctt gttatcgttt
      241 ttgtaggctt tgagacaaca acagaaaaga agaaatggag tctcaatgat ggtaaacaag
      301 actgttcctc gtgttgtttt gacaccatta aaggtgtccg atgagcagtc ggattcacct
      361 tcaggtaaat agctaaagga ccgtttgcaa gatcagcctt cctctgaatt acagaatttg
      421 gaattgctga aatagtgttt ccactgagtg gctttgttta acgtctttat ttccttatca
      481 agactcgtgt ctcaagaaag aactgaaggc acacagtaaa atgacaattg gtaatagcag
      541 cagctttaaa ggaatgcaaa gtaacatttt gtttggctct ggagtaatgg aggaccacat
      601 gctggtattc agtgccataa aaagag
//
LOCUS       KCPA01001453             856 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 159750tic ultra-conserved element locus
            uce-908, sequence.
ACCESSION   KCPA01001453
VERSION     KCPA01001453.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 856)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 856)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..856
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="159750tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>856
                     /note="ultra-conserved element locus uce-908"
BASE COUNT          286 a          147 c          144 g          279 t
ORIGIN      
        1 aagtatctat aactattaag caatcatgtt gagacatctg acaactatta ctactgctta
       61 gttatttttt atatatttta acagtacagc tttttccact tcatgtaaac ctattttaaa
      121 aaaagacaca ctgaagcata ttttattcct tattagctat tctacgatat gcatcatcat
      181 tatactatta tacaccagtt atttttagta aatcctgatt actgcttcct gaagaagaaa
      241 aaaggaggac gacagcgatt aagttatttg tttagttttt tagattcagc tgtaattgct
      301 ggtacacatc tccctgactg cacacatgaa gcaggttgaa tagaacactg aaattacctc
      361 cttcataata gtttgttttg ataatgtatt gtgtgtcgag atgatgagaa acagttgctg
      421 tcaatttgat tagccattat atttttatgt taattgccat tattgggtcc attctgttta
      481 gtgtcaccat agaagccata caatgttagc ataaataaca aattggagta aattaggaag
      541 atatattttt gccaattcat tttaattgcc cctcagtcct tccgtcggtt aacgcagctg
      601 ttgacccata ataagcacta ggtcaatata gctgcttgtc aattcagaaa tgcaaagtgc
      661 tgtgttgctg gtaatggata tacaacaacc tttgccagcc aactgaagca aacgaatgac
      721 aactcacatg aaagaataaa gcatcagcta tagagtttag tgacctgata ttagtaggca
      781 ggctaattga aagtcactgc ttaaatggat aaagaaagta caaaaatcag tacgtaaaaa
      841 atgcacacat cggcag
//
LOCUS       KCPA01001454             557 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 159859tic ultra-conserved element locus
            uce-7963, sequence.
ACCESSION   KCPA01001454
VERSION     KCPA01001454.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 557)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 557)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..557
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="159859tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>557
                     /note="ultra-conserved element locus uce-7963"
BASE COUNT           96 a          168 c          143 g          150 t
ORIGIN      
        1 gcagcagcag tggccagggc atggaagagt tgctttggac cactctcttt ttctgaatgc
       61 ctttatctct cctcaaatta ctcccttacc attgccctct gtctctaccc cgtgctcgcg
      121 tgcccctcac tccggtgcca ttcccatgcc cctacctgtg ttgttctttc tgccctctct
      181 cctctgcagg ggctgttaga gcctctagta ttttcccgat cctgagtgtg attctgcttt
      241 tcatgggtgg actctgcatt gcagccagcg agttctacaa aacccgacac aacatcatcc
      301 ttagtgccgg catcttcttc gtgtctgcag gtaaatgggc tccgggggtt ggggctgccc
      361 agcacctgca ggggcgcagt tgatttccca gccctgacaa gccttatttg ggctgaaagc
      421 agcgtcacaa ggatgcctct gcctgctcgc ccagcagttt cctccagctg acggagggag
      481 agtttcccta atctgacatc tctcaggggc caggagtgca gtccagggaa gtgcaggaac
      541 gtgaggaggg ttttgcc
//
LOCUS       KCPA01001455             693 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 159969tic ultra-conserved element locus
            uce-2273, sequence.
ACCESSION   KCPA01001455
VERSION     KCPA01001455.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 693)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 693)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="159969tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>693
                     /note="ultra-conserved element locus uce-2273"
BASE COUNT          203 a          140 c          178 g          172 t
ORIGIN      
        1 aatgctgttt acacctccaa ctatgccaaa gagcaggaaa ggcccagtat ggacgttgat
       61 cacacgtaac ccgcgcaagg caatacgtac atgagtgtgc agtgtacagt ggtggaatca
      121 aaaatcagct gctataaacc ccctttttgg acaccacggt aattgttact gcataatggc
      181 gatgatgcac atcagaagga tttatccaga taaaatctgc agacgtttta atcagtacca
      241 agatagatct tgtttatatc aagaaccttt ttaatacagc attgctggtt tggtccgaca
      301 tcatctcctg cagtgtgtgg aggcaggcca ggagtatgaa ggctacagag cagagcagga
      361 agaaagtcaa ctgtgaaatt ggtaatttta tgagtttcac ggggggtttt gttgttagac
      421 acaatgcatt tggaacagag tgcccggggt aataccatcc acacagtgtc catttgtcag
      481 ctataggtaa cgatatcttt aacctagagt tacaaaggga atccgaaagt aggctaaggg
      541 tggagatgtg cccgtcacgg aaaggtcatg aggtattcct gccacattga gcctggggaa
      601 cccatcagaa actgaggcat tgtttgccct tgaagagcgg tgggaaaagt tacctcattt
      661 ttcagcagcc cagcagagtc ctgcagggag gag
//
LOCUS       KCPA01001456             783 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 160083tic ultra-conserved element locus
            uce-5498, sequence.
ACCESSION   KCPA01001456
VERSION     KCPA01001456.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 783)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 783)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..783
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="160083tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>783
                     /note="ultra-conserved element locus uce-5498"
BASE COUNT          208 a          184 c          198 g          193 t
ORIGIN      
        1 tgtttcaaac ctgtgtgagt cctgaagtgg tccttcatgg cagaggccgt gaggaaagaa
       61 taatggcagg tgggccaggt gcacttgaac ggcttctctc ctgtgtgcag cttcatgtgg
      121 ttcttcagtg cccacttctc tgtgaagctc ctgtcacaca ggtgacatgt aaatttcctg
      181 ggtaggcaag agaaggaatt agcagcccgc acatgcacaa aagcgaagga tcgtgttttt
      241 aacccgaaga gtggtgaatg catagacttt cgtgaagaga attgcagacc gggtctgtca
      301 tgtctgtata accaggcatt gatttttctg tcgaggcctg gcacttcagc catttattct
      361 ctgctttgcg gttgggccca acgggtttga aaaattctgt tacagtccag tcacccctga
      421 ggcaaatgtg agaatagatt tcacctgtgc aggcccacac cacttatcca gggcacgggc
      481 tgtcagagca aaggctaaat gaaaagctat ccatactaaa ctactcagac aatcacactg
      541 ctcggtgcca tgccgctgcc gcgccggctt gaaatactac ttgtaataac gctgttgcga
      601 taataaacaa aaactgcttc ggaacaaaaa tgcggttttt taagaggggc tgtagcgatg
      661 gaagtgtttt ctgataatgc attctcctcc ccagcgctac cacaggaaac ataaaagatc
      721 ccagtcgtgg caaggaagga gagaaaaggc aattcgttct gctgagcaga gccaccgcac
      781 ctc
//
LOCUS       KCPA01001457             645 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 160191tic ultra-conserved element locus
            uce-6515, sequence.
ACCESSION   KCPA01001457
VERSION     KCPA01001457.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 645)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 645)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..645
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="160191tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>645
                     /note="ultra-conserved element locus uce-6515"
BASE COUNT          216 a          117 c          123 g          189 t
ORIGIN      
        1 tcctcacctt tcattaaaat aagaggtttc ttcatcaagg aaaagtattc tgaaatggta
       61 gcctggttca acgctacagg cagatagctt tgcgttggag tgctttaata tgtttttata
      121 ttgcatataa agcatgcaaa cataaaccag tttgttgaaa actaccctct ttgtggaagc
      181 tggctgtaat tctgaacaag ttttcaattt tcgcactgct gctagggtaa aacattttaa
      241 agagtttaat ttttacagtg gcttcaatga cacgagatta tctaacaaag taatggttaa
      301 tcaatagagg gtttagttgt caggtgaaac atataacaca ctaaaaggga ttgattgcaa
      361 gactcctcct tatttactgg gaggtatata ttcaaaatga cacaaacttg ttaccaagct
      421 gcattccttt aaccttgcaa aagccgtttg agaagagtgt taagcagccc tatagccaaa
      481 caagctctaa taaaaaagaa atatatggga gcaccaaatc atgtcagaag caggggaacc
      541 acaaagctgt attcattctc agccaaaggc ttaaaatgcc acagaggcac tagactatgg
      601 ttcactaaag atagagctgt atctgatctc attccataag tgtct
//
LOCUS       KCPA01001458             697 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 160299tic ultra-conserved element locus
            uce-5919, sequence.
ACCESSION   KCPA01001458
VERSION     KCPA01001458.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 697)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 697)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..697
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="160299tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>697
                     /note="ultra-conserved element locus uce-5919"
BASE COUNT          174 a          133 c          147 g          243 t
ORIGIN      
        1 ctctcttcat gagaatggct tctccctatg ggagaggaat tagcattcct gggatatgct
       61 gccactgcat ttatttgggg ccctcactct ccttgtggag tccagtatac caagggtttg
      121 ttatggttta attcaaaagt gacaacttcc aagaggtgcc acgtgggcac tggtcctagt
      181 ttttaattcc aagttttctt gttcatcctt gattaataga atttcactaa ataataaact
      241 cttctctctg ttatttgtgt gtgtgatttt tgtagtggag aaggcaaatg caaagccctt
      301 ccagatgact gaaaaagtgg gtcctctgca gctacagggg attctagcca ttaactaaag
      361 gccagcaagc actcaagtcc ccaagtgttt tcctggtgta accacttgtt aactacattt
      421 tctcttcttc tttttatttt tacattttag ggtgttacag taatttgaaa ggcaatgagc
      481 agggtttttg gaacttacct taaaagcaaa gtgctgagaa gacacctctt cttacagaag
      541 tcttattaaa ctcttctaga cttgctttag aagtaactga tttccattgt acttgtcttg
      601 atttacttct gggaagggtt gaattgaata cagtgctaag tttggtacat ggcctaatct
      661 gtcatgctgg agctgtgggg agctgtttat cttatct
//
LOCUS       KCPA01001459             530 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 160412tic ultra-conserved element locus
            uce-548, sequence.
ACCESSION   KCPA01001459
VERSION     KCPA01001459.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 530)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 530)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="160412tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>530
                     /note="ultra-conserved element locus uce-548"
BASE COUNT          173 a           88 c           87 g          182 t
ORIGIN      
        1 ttgtggtgtt tgtctttgca gtgaactgag gagaagggaa ggcgggaggc ttgggaataa
       61 cttttcacag cttcagcttt tgtttatctc taattgtcaa gctgttattt ctggaaaaga
      121 tgcaagatgc caccttcaac cagtatttct tttgggcatt tattaattat aaccacaaaa
      181 gcatgcatca atctatcaca aacttctatt gttccttctt taagcctacc ttaactccat
      241 tattgaaact ttaattaaag cagaaatgaa acaaaaatgt tatgcttctt gcattttaaa
      301 aaagcatact tgtataatgg ttacatgtct aaattagcta aattaacacc atatggtagg
      361 caaagtatat aaagcctttt aaagctgaca gctaaagtga ttaaagaaag tctacagtct
      421 tccacttaca gcttaaatca catctgtgca ctttctatgt taattgcagt acatgcagaa
      481 gtggataata aagaaattcc actttattgg ttgtaattta tatttattac
//
LOCUS       KCPA01001460             706 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 160522tic ultra-conserved element locus
            uce-6604, sequence.
ACCESSION   KCPA01001460
VERSION     KCPA01001460.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 706)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 706)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..706
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="160522tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>706
                     /note="ultra-conserved element locus uce-6604"
BASE COUNT          223 a          114 c          136 g          233 t
ORIGIN      
        1 gactgattta gtattacaac agatttacat attctattaa tgaaataaaa gtattttccc
       61 ttcttctttt aaaaagcaat ataattttaa aagggtaatg taatcacaac cattatgtca
      121 atgaaaatta cacgctgggt ttatctctgt aggtatctgt caaatacaaa gcgtgcacaa
      181 catctttgga gtaataatga tgttttatca ttttaattac aaacactttg aaaaaaatcc
      241 ctaacgtgta ccaattgggg tggtctgaat taacagtagc ttgatagccc aagggtagca
      301 aaaatagatt gagctaccaa atttcatagt agttatagca gctgtcttct tgcctcaggg
      361 aacctgggta tttaacaaag cagacagctt ggcattggca tctgatcagt aatgtgggtt
      421 ttgttggaca gaattctatt gtttcacggt ttggttcgga attcggacag ctatggcatc
      481 aattagtttt tatagttagc ttctgtgtat tcacttacag gtattgtaaa aggttatttt
      541 ctcacttatc acttgctcca agtagggaac agtcttgaaa cgagcaatga aacatgacag
      601 gatttaaatg tcagggtcag ttaccttccc atttctgtgc caaaattttg ttgaaccaac
      661 tgtgtaagtt tttctaaccg ggcagaaaag tgaataaggt gaaagc
//
LOCUS       KCPA01001461             378 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 160627tic ultra-conserved element locus
            uce-1891, sequence.
ACCESSION   KCPA01001461
VERSION     KCPA01001461.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 378)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 378)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="160627tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>378
                     /note="ultra-conserved element locus uce-1891"
BASE COUNT          114 a           72 c           77 g          115 t
ORIGIN      
        1 aagtggacac tatttaaatt gggggcatgg gattttctgc aattaattgg attgctatgg
       61 taggccaatg tattaagcac aggcagtttt gctgctaatt acacacaact tctctggagt
      121 atcggatatt cagatccatt ttatgaatat ggtagggaga ataacaactg taaaacaaag
      181 cactgtgcat gtaagtgact gttagcgtgt atttcagaag ggataaatgc tcaccatatg
      241 gtacaattac tgtgtccaag ttttcaaatt agcttctctc atcctcctta ttactgtctt
      301 taaaaagaga ggcccaacat gatttatcta ctctgcagca gaactcttga cgcaaaacag
      361 cagcccagtt ctgtccag
//
LOCUS       KCPA01001462             573 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 160737tic ultra-conserved element locus
            uce-3761, sequence.
ACCESSION   KCPA01001462
VERSION     KCPA01001462.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 573)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 573)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="160737tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>573
                     /note="ultra-conserved element locus uce-3761"
BASE COUNT          180 a          102 c          112 g          179 t
ORIGIN      
        1 aagggttaaa ggatgtgaaa ccctacatta aacagagtgc cagcaagggt taaggcaagt
       61 gacacggaca acgagactct ccttctgtgc tacatatgta gatgggtatt aaggacatgc
      121 atctctcctc atctaaaatc atgaattttt atgaagtaag ccctgcattc ccataattca
      181 gtagggtgca ctttgcagac cctaaagtgc tgtcactaca gaaggtttca ttgcttgcac
      241 ctgctaaaac atttgaggta tttgagaggc agtgaaacac atttgctttt cattttatct
      301 gactttgaaa atctttgaag tgtttaatag tagtccagaa aagatttctg cctcttaatc
      361 atttacttgt agggcacatt ctccactggt agcctgtcag gcagaaaacg agtttagccc
      421 agttttatta agtgccacat gccgagtcag tgttcattaa aggtgtttta aggtttgaat
      481 tatgtaattt atgagaaaaa gaaatacaaa attccattgt tttattaata tgcagcacag
      541 gatatactgc taataacata ctttttaaac aga
//
LOCUS       KCPA01001463             731 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 160851tic ultra-conserved element locus
            uce-372, sequence.
ACCESSION   KCPA01001463
VERSION     KCPA01001463.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 731)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 731)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..731
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="160851tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>731
                     /note="ultra-conserved element locus uce-372"
BASE COUNT          211 a          151 c          112 g          257 t
ORIGIN      
        1 ttttcctttt ggctattgtg actactttat ttaatttgcc atcatattta gctactcacc
       61 tggaagacat aactgtagtt tttccacaac tgttgtaata ttcctctgct gaactctaca
      121 tcggatgatc tcctctgttt gggctatcac cttaaaggga aaatcacact taaataaatt
      181 tattttgctg caaatattca taatgcccat ataggaagca ccattttctc acctctttcc
      241 cagcatcctg aagccttcgg ttggtatcag taacttggac cttaaaaata atttcacctt
      301 tgttagacaa atatgcatat attgccctga tgtgactgct cacccttgta atcagatcat
      361 gcttcctgag aaacttagaa caaagaaatg caaattcaaa ttaactctac agcttgaact
      421 tgaacttttg atcgcaaagg gcttttgtta aattcaatta cttatgacag ttctttctaa
      481 cagattctgt ggcaaacttc tcaaatttac ttgggatttt tgaactttcc ttgtttctgt
      541 aggtctgtca aacaattcaa atcattgacc caattgacca ctggtccctt tttgataacc
      601 tcaatgagct ctatgggcca ttcattgtct gtaagaaatg gtgattgcat tttatggtaa
      661 ttaaacattc atactttgct gaatgcaaac actgggtggt tgattaacat caaacgtgga
      721 aatctccaaa c
//
LOCUS       KCPA01001464             533 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 160959tic ultra-conserved element locus
            uce-2674, sequence.
ACCESSION   KCPA01001464
VERSION     KCPA01001464.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 533)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 533)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..533
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="160959tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>533
                     /note="ultra-conserved element locus uce-2674"
BASE COUNT          153 a          111 c           84 g          185 t
ORIGIN      
        1 agttaggaca atagatttaa ctcaacccat gtcttgcaca ctaaatgaaa tctggagtgt
       61 gtatctttac atctacctga tccttatcta cccctaaata ttttacctat gcttagtgat
      121 tacaaagctt tctctcagct tttgtaattc atttgtgcct tctagcagtc atgagtcatg
      181 ggtcttttac acttgtcaag tacacctaat ccctaccctt catggcccag aaatcctaaa
      241 gatggctgaa catgtaattg ccttgaagtg taaaatattt cccacattat ttattatagc
      301 attgcctgct agcacctcca tagttaaggt tgtgtcagca tttttattat aagcccctat
      361 tttcagctgt aaaaaagtgc ttcaggctgg aaccaggaat gcaagtgatt ttatttttta
      421 ctgtttttta aaacaaaatt accttggacg tttttaagtt attccatctg tagtcaacag
      481 cccacacatg tctatttaca gctgtacatg caagtgtata aggaagatca agc
//
LOCUS       KCPA01001465             738 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 161066tic ultra-conserved element locus
            uce-7028, sequence.
ACCESSION   KCPA01001465
VERSION     KCPA01001465.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 738)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 738)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..738
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="161066tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>738
                     /note="ultra-conserved element locus uce-7028"
BASE COUNT          225 a          127 c          148 g          238 t
ORIGIN      
        1 tttgcaattt aacacttagt ttatatttaa ttaattcaga aagtgaagaa cttcaaaact
       61 ggctttgaac aggctgtttg ttaaaaaaaa tagaacattt atgttttcac tgttgttttt
      121 tcaaatgtga tgtgacaaag tgaaaaagct gcatgaaagt gtggttcttt gtgtgatgga
      181 agtgggatgc acctactagt ctcacatcat caaagaaaca gacatatatc tataatttat
      241 gctttgcttt aagcttccgc tgatccgatg tggctttttc agacaacaca ggcagccctg
      301 gcacagcctg tcaatcatct gggcatgctc aaattgtaga ccattagtag gagagacagc
      361 aaagtttctt taatgacgct tttatatgtg gtgtgttggc agtgaaacag agaagaattg
      421 acttgatcaa tgcattagtc taatcatggg gttcctgctc ttaatttctt ttgtcggtaa
      481 tttccatact caagcagcat tcaggatact tgtaaagaca cacttagagc actgcatgat
      541 gtatgcagtc acctataaag catgtcttgg atacagctct gtaggaaaca aggaagaagg
      601 atagggggcc agtcagattt ttctttgagc tacttttcat gttgtgagaa ttacagtacc
      661 ttagtcaaaa agaggacatt tccatctttt atatatatat ctcccaaaac cacactagat
      721 gacagcatgt ttgattct
//
LOCUS       KCPA01001466             531 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 161176tic ultra-conserved element locus
            uce-4519, sequence.
ACCESSION   KCPA01001466
VERSION     KCPA01001466.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 531)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 531)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="161176tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>531
                     /note="ultra-conserved element locus uce-4519"
BASE COUNT          164 a           94 c          110 g          163 t
ORIGIN      
        1 gataaaattg aattaaatga acctgcctct aagaaaagat actgaatagc tgagtagcgc
       61 attattcaat gaatggaaaa cggagaggct ggctgaagct gctgggaaat ggttttaaca
      121 ttctatcggg ctaaagagta attctgtgaa atcactgtat ttgtttcccc cccacctccc
      181 cgccctcatt ttttaaatag cagtgctctt catactgtca gaattcagtg ttgtgacacc
      241 cctactcaaa agttatgaca gcagtgtaat gacagctact gcctcttgag aatcaatcag
      301 gcaattaatt ttgtaaatga aatgctgatt atacaaagct tcacatgaga ggcccagtga
      361 ttaaaatcaa tttaacaaat tgtttcaggt gggacttgat taataatttg ccataaatgc
      421 tgaggatata tgaccagcat acctttttgt gtgtgtatgt gttaatatcg ctgggagtgg
      481 aaaaaatctg cagctaactg tatgtacttt tggcttgtga cctagatgtg a
//
LOCUS       KCPA01001467             385 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 161282tic ultra-conserved element locus
            uce-5187, sequence.
ACCESSION   KCPA01001467
VERSION     KCPA01001467.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 385)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 385)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="161282tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>385
                     /note="ultra-conserved element locus uce-5187"
BASE COUNT          115 a           70 c           64 g          136 t
ORIGIN      
        1 tataaaagtg cataaattgt aatttaagta aaaagccttg aaatttttat caaaagcatt
       61 caaattagtc tctccccagg tcagctaatg agttgtcatg agctggcctc ttactgtagt
      121 gcacctcctg cagactaaga cagtgaacca tgttttcatc aaaggaaatg ctcattagta
      181 gagctttcag aaactgattt gattatagtt tcacttgtta aagtgaaata ttttcagctc
      241 attaggatga ttatgattca aggtcatctt ttgaagctag tcctgtcaat atgagataaa
      301 tgggccctca tctttttccc ttctttacgt ctgtgctttt taaactcttc tgtgcaaaag
      361 ttccatagcc acaattaatt tttag
//
LOCUS       KCPA01001468             619 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 161393tic ultra-conserved element locus
            uce-97, sequence.
ACCESSION   KCPA01001468
VERSION     KCPA01001468.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 619)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 619)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="161393tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>619
                     /note="ultra-conserved element locus uce-97"
BASE COUNT          203 a          105 c          123 g          188 t
ORIGIN      
        1 aaaatacatg tgctgaccct tttttaccat atacctagca gagccaaact aaatgaagct
       61 gaggtctctg tccagcattt ggaagccagt taaaatagga aatcagtgtt tctctaaata
      121 cacagagtat attaccttag tcataaaatt ggggactttc aaatctaatt tgttcagcac
      181 tagcgctgtt gaaggctggg aagtgttcca gaggaaatca cctccacgca aacagagatt
      241 agcagctccc cattgcagac atatggaaat gattgcctat aatctccggt aattgtggct
      301 gtattacatt caaatcctgt tttcaatttt cttaaacttc tagactgatt gtgttattaa
      361 atcatgctgg ctgatgtgtt taataaggac ctattaaatg tttataaaat tagggaaata
      421 aatacgggct tttagtcaga ttgtgtgatg gatctggtaa cctattgtta aaagtagtgc
      481 tggtaaaaac gtgtctaaaa aaattagact taaaggctcc ctttaaaata agaaaccagg
      541 tattcaatgc agatatccaa aatgatcttt gcagatgttc agggggccaa attagaaaga
      601 tctcactgag ctgtgggaa
//
LOCUS       KCPA01001469             549 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 161500tic ultra-conserved element locus
            uce-177, sequence.
ACCESSION   KCPA01001469
VERSION     KCPA01001469.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 549)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 549)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="161500tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>549
                     /note="ultra-conserved element locus uce-177"
BASE COUNT          188 a          106 c           88 g          167 t
ORIGIN      
        1 atcaaattga aggcatgttt ttgcacagct tttatttagg aaaaatcagc aagaaatgca
       61 tctttctata ttttccattt attagaagtc tcctttcatc caagaaatat gagacctgaa
      121 ataaattgta ccatcctgca ttcaaatcct tgccagtgct aggcggtatg ctaatgaaaa
      181 caggttgata aatgactccc tgatattttc cagacatttt tctctcagaa gtgctctaaa
      241 ctgatgtagc tcaaagagaa taaggcgcat taagtcatta tatcaatttt tgttacccag
      301 atacttcagt cccagttaag agctgacagc caatataaaa caaggcaagg gcatcatacg
      361 actccatcga tcaaaccttg tcgtagatag attgcctatt acacaaatag aaccagcaga
      421 ttcagtttgt agttttatgc tctccaatta aaggataaca cggtactttc ccataaatct
      481 gctaattgca actgaattaa tttaacaaat tttgccaagc acagaaaaaa gtgattggtt
      541 aagctaata
//
LOCUS       KCPA01001470             601 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 161607tic ultra-conserved element locus
            uce-2315, sequence.
ACCESSION   KCPA01001470
VERSION     KCPA01001470.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 601)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 601)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="161607tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>601
                     /note="ultra-conserved element locus uce-2315"
BASE COUNT          168 a          113 c          145 g          175 t
ORIGIN      
        1 gggaacttgt caatggaaga aaaagaactg taatcgcaca tttacatatg ctcctaattg
       61 ttgatttggg gattttctat gaatatggct tcacaaaaca gatgctgttt aagaaaaggg
      121 ggaacataat tttgtgggca atgaattaag tgtttttgtg gccctctcat ccgtagctag
      181 gagcagtttg tggaccgcgt ctgtgaacgc cgctcataat tgtttttcac acataagtta
      241 tgcaaatgag cttttatggc aactggcata acaattagca tcctccagca atattttagc
      301 aggttaattg caaaatttct aaattgtaca tctgacttgt taattaggca tgacagaggt
      361 ggtaaaatag ttatcttcag gcagtggcag ccaggagctg cttgaaatgc aaagagcaag
      421 gattgattgg atttgagggt tacaattgtg ggagcactgc tgttgtcaag tgccgctgag
      481 cagctctgct ccatcggctg cctcagagca agaaccacgt cggtgctgag aggatcctgc
      541 cagttacaaa tctgctttat ttaactctga aattctccaa atcccggctg tgggaagcgc
      601 c
//
LOCUS       KCPA01001471             590 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 161818tic ultra-conserved element locus
            uce-1531, sequence.
ACCESSION   KCPA01001471
VERSION     KCPA01001471.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 590)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 590)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..590
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="161818tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>590
                     /note="ultra-conserved element locus uce-1531"
BASE COUNT          170 a          124 c          105 g          191 t
ORIGIN      
        1 tcatgattac tgtgcccaca taatcaaaga tcgctccata aaatgtactc cctaaaggga
       61 tgaattccct gctcctaact ggatgtcagt tggagggatc agaaccccca gggatctgga
      121 gtctttgctt gcccttttca ttacgtgttg ttagcattgt gttacttcat attcttctca
      181 atgcaaatga gtaggtaatc atgtgtaaat cgtgccctcc agaaggcaca tgtagtgagt
      241 ttttttcccc aaatctacca cagggatttc tcacatggaa cataattaca tctctgccat
      301 atgggctcat ttatattcta ttacaggtta agctaatacg actcagaaat atgcttacct
      361 caaagtattt tgagcattgt caaaacactt gtcatttctt tcttgcctgt ttgattgtga
      421 atgactttat atttatttag agatccatgg tgccaagtaa cttcagaaaa acaagatcag
      481 accagtctgt gttgcccagt gtccaaaaaa aattctctct cattacatcc ttcttcagta
      541 atggcaaata ggttggtgaa caatgagaca gtaagacata tttacctgca
//
LOCUS       KCPA01001472             545 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 161929tic ultra-conserved element locus
            uce-5530, sequence.
ACCESSION   KCPA01001472
VERSION     KCPA01001472.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 545)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 545)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..545
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="161929tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>545
                     /note="ultra-conserved element locus uce-5530"
BASE COUNT          176 a           91 c          107 g          171 t
ORIGIN      
        1 agaaggctgt acacagaact gtgtgctctt tagaacaaaa gtgctgatgg agctgtggaa
       61 acgaggcctt taagtttcta agaagcaaaa actttggcat tttgtgcaca atagaggtgt
      121 tcacagcagt ttcttccaaa ctgtatggca cttttcagct aggattgtgt gcagtttatg
      181 tcaaaacatt tcagtgaaga aatacaaata cagactaatg tttgacttct tttgttgtgt
      241 tgaactggag ccagagaaag tatttatata aaaatccact tgtgaaatgc ataaccctct
      301 caatgtgact tatatgtctg agacttacag agaattcaag ctgattgaca gaaaatactg
      361 ctcttatggt gtcagaatgt attatcatgc ttatacagaa atacttttca caaatgtacg
      421 tgttcattgt cattatgttc tggtatacta gagactccag gtactgaaat acccaatttg
      481 ctaggaccta aagctaccac aaaaatatat tagacaacca gatggataat tcagcttgtt
      541 ggttt
//
LOCUS       KCPA01001473             414 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 162039tic ultra-conserved element locus
            uce-6973, sequence.
ACCESSION   KCPA01001473
VERSION     KCPA01001473.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 414)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 414)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="162039tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>414
                     /note="ultra-conserved element locus uce-6973"
BASE COUNT          130 a           84 c           71 g          129 t
ORIGIN      
        1 attaatctct tatcgattta tatatctgta attttcatct gccctttatt ctgcatgtat
       61 atttatatat gaccacaaac ctgcagtgca gtggaaagct agatttaaat attttcagac
      121 caactgtacc catcatttgc attccactga ctcattcaga gcaaagacat ctgagcagaa
      181 atacagcaga taaaagagaa accattaatc cagggaagat tactggcaca gaatctttat
      241 cctgtatcct ccctgaaatg agacaaagat cttactatgt acatccctct ggcttagctt
      301 cagaaagtaa gcagtacagc agtgtagaca tggtactttt taaaggcata ttacattggt
      361 ctgaaacttc agtcttctgg cagagctcag tggttgcttt tagaagagtc ttca
//
LOCUS       KCPA01001474             649 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 162151tic ultra-conserved element locus
            uce-3831, sequence.
ACCESSION   KCPA01001474
VERSION     KCPA01001474.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 649)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 649)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..649
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="162151tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>649
                     /note="ultra-conserved element locus uce-3831"
BASE COUNT          200 a          123 c          129 g          197 t
ORIGIN      
        1 ttgtagtgcc gcatgaaata tgtaatatta ggatacccaa gtcaagctca tgtctcattg
       61 acatctttgt cttttaaatg gaaagtaagg ctggagggga aaaagttagt taaaatatgg
      121 aacttctgaa gtgcttaaac cagctaatgg tactagatct cattttagat tccaggaatg
      181 aaaaagaaaa tcagacttac atccctgact gggtgttttc cactataggc cctacatgtt
      241 tatgtagagg gtattgcgaa cgtttggagg gatttgggag tttcaaaagg aagaagttta
      301 tacattagtg ctgcaagttg caaaacactg ttgatattca aatgtttatt gtgtaaaatc
      361 tgggataagc ttcagcatga gagctccttt aagtgcctac aactattgct aattcccctc
      421 agcattgagg cttgcacaaa ggccttaatc caattccact tttttttttc agaaagccta
      481 tgctattttc tctcacataa actaacaaca ctatcccatc acactgcaga atgggtcaaa
      541 gaaaaagggc tctgtgttta tacttcacca acactttgtg tttcttggcc aagtatggca
      601 agaaatttta agtgggtccc ccaggcccca cgccatcttt agaaagaaa
//
LOCUS       KCPA01001475             691 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 162262tic ultra-conserved element locus
            uce-1633, sequence.
ACCESSION   KCPA01001475
VERSION     KCPA01001475.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 691)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 691)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..691
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="162262tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>691
                     /note="ultra-conserved element locus uce-1633"
BASE COUNT          212 a          138 c          101 g          240 t
ORIGIN      
        1 gtataaatta aacattcttt gataataata tgcaatgaca gcataatcat atgctaacat
       61 ttaatcacct tttatataca atattaccct gattcttctt taaattttta tgttgtatat
      121 tgctgtacat ttttcttact gattgattct ctttattact actgatttta tttatgccgc
      181 taattttttt tcctaagcat atattttaat gagtagtttt gttcagctaa cgtctacaga
      241 ataagagaat tcagcacacc tgcctaaata agatgcttga gatcactgag gaaagaaatt
      301 gacattttac tttaccctca gcatggagcc aggggcaaag tttgatctga aaacttgcaa
      361 attaaccaaa actgtcactc aggagttatg ggcctgaatg ctgcaaaata tgttctttga
      421 agtcctcatt tcagcaaaat tattaaaaac tttatatcta attaaaattg taactgcatt
      481 cccatttttc aaaatctcta tatcctcggg gccaattggg atgagtgaat tcgcaccctc
      541 ctctctgcag cacactgaac tgctcctaca gcaatatcag atcattacca tctccccagc
      601 tgagagggag cagccattat catgcagcat tattaatctt cttgtcttat caacttgcaa
      661 atcacaagcc attgagcctt atggcatggt t
//
LOCUS       KCPA01001476             710 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 162372tic ultra-conserved element locus
            uce-5464, sequence.
ACCESSION   KCPA01001476
VERSION     KCPA01001476.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 710)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 710)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..710
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="162372tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>710
                     /note="ultra-conserved element locus uce-5464"
BASE COUNT          199 a          165 c          131 g          215 t
ORIGIN      
        1 attcaaatag aaaagcaaaa gggaagaaaa tgctttagat gtgctctttt gattttttcc
       61 aatcttgcct gaataaaatg gaatgggaga tcaagaacac tcaattaatt tcaacactgg
      121 gtgtcagagg gaaaaggaga gggaggaggg ggaatattat agatgcacaa cacttaacaa
      181 atgcatagat tgaaagaagg aaatataaaa aaccatgtct atattttatt gcactcagta
      241 agcttttcac ttgtatttat agctgcaatt atatctcaat gaggtttgtc tacagtgttg
      301 gcttcacgct aattttcccc ctcactgcat tcttggaata gcctcggact gtttatgaac
      361 cagacatatt gacctcattt acagctagca gtttaaatcc ataatttttc cacccacaat
      421 ccctctttga cattccggca atgcggccgg ctcactgaga ctgaactaaa agtctcacac
      481 ttcattgaac accattatgc ggctttatgc ttataagcct gtttccctca gctgcctttc
      541 agctttgctg gagatccgtt tggccacagg ccggcagtga ttaactggaa gaatccaata
      601 aatcagcctg tcagccagca ggctctcctc actgtgtcta caaatcgaca tttggatttg
      661 cactctctcc tccccctttg ctccttcctt tgctcctctc tgcctctctt
//
LOCUS       KCPA01001477             567 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 162480tic ultra-conserved element locus
            uce-3465, sequence.
ACCESSION   KCPA01001477
VERSION     KCPA01001477.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 567)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 567)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="162480tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>567
                     /note="ultra-conserved element locus uce-3465"
BASE COUNT          184 a          120 c          115 g          148 t
ORIGIN      
        1 cttaaattag taactacgta ggcctcttcc aaggcatatc agagaccagc tgtgcaagga
       61 cctgtcacct tcttgtcagt gaaagttttc tgtccaaaga actttcgtca tcccccattc
      121 ctcaagtagc tggatgtcac ttgaagagac agctgaagtc acttgcaatg aatggtctca
      181 aatcagagct cactgccctt gtcacagaaa gtctcacccc gcagctaaaa ctgtcactga
      241 tcatgtttag atatgtacac tgaggtatca gattagaaaa gagtatgcac gagatgggag
      301 tttaaaagag gccaagttgc aaggaaaatc ttaataggga gaattgaagg cttgaagagt
      361 tagccctttt ccaaaccaaa tttatattcc ccatcaaatc caataaaaaa tatctagctt
      421 ctaaaaacag catgtgtcca accaacatat tcaagaagga gctaaaactt taagtggtac
      481 tttggccaga gagcgtgtag attgctgagg tattatggca tctctgcagc aggttatttc
      541 gtcaacagga aaattcccaa aaggcat
//
LOCUS       KCPA01001478             554 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 162590tic ultra-conserved element locus
            uce-4133, sequence.
ACCESSION   KCPA01001478
VERSION     KCPA01001478.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 554)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 554)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="162590tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>554
                     /note="ultra-conserved element locus uce-4133"
BASE COUNT          117 a          149 c           94 g          194 t
ORIGIN      
        1 gtgggcagac cctgacctgg ccagctcctg taattatctc ctgcaaggca aaacaattag
       61 gagtttctgc tctcctctct ctcccttccc ccttcctctt cattgttctt ggcaggttaa
      121 ttaaactcag aaaatatcct cccccctcct aagcatgaga ctttttctct ttatatttgt
      181 atttaattaa ttcctgcaaa ggctctgact atattttttt ggtataattt ctttctttgt
      241 ctctctcatt gttaatcctt gcatattcag tttttctcct cccttttccc ctagatttga
      301 aattctatta ccatttcaga aggcaggcgt ttgaagagaa aattgaatac ccgtccagtc
      361 ttgataagaa gggacatttg gtactaacgg taatttgtga agcagatttc ctcacacccc
      421 gttccccacc tttctctcca tgtttgctgt ggatgatgtg gttttgcagc ctttatatcc
      481 ctggattact gcatcaggca gccacgtggg tgacacgctg gtctggcacc tcccatgtgc
      541 cttcacaccc ctcc
//
LOCUS       KCPA01001479             631 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 162702tic ultra-conserved element locus
            uce-5804, sequence.
ACCESSION   KCPA01001479
VERSION     KCPA01001479.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 631)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 631)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="162702tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>631
                     /note="ultra-conserved element locus uce-5804"
BASE COUNT          192 a          121 c          106 g          212 t
ORIGIN      
        1 ctttctctaa gaaagaggaa agaatggggt ggggaaagtt cattacttca aaataatggt
       61 tgaactggaa gtcttcccat tataaactaa gcattgacat gttgaagact atccatatta
      121 tttttccttg ttgcccctag tagaaagttt gctcccatcc atttgattgc attactttgc
      181 tcaagtaaaa tttgatcact ttccaagtac tggctgcaaa ggtatcaata tttcatcagg
      241 tctttgttca gcactggttt tagcttttct taatggtgca ctttaccagg cagctttttc
      301 atacatcatt aaacagcagc tatagcactt gtgccctgtt tctgatttac cgtagatagt
      361 aatgtttaag atcacattaa acaccacaca tgctctcagc tatttgagca acatcagagt
      421 aatgaacagt caatagtctt actaaattag taccctttgg agctctcgtt actgaatcaa
      481 ataagtatcc ttggtcctct ggagaaggca attctaatgt gaaataatga atttagtgtc
      541 taatcttttc ccttctgaca ttcaagagta aattatataa attatgtaaa atagatctaa
      601 tacttccagc agtcctgcaa gacactgctg a
//
LOCUS       KCPA01001480             678 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 162809tic ultra-conserved element locus
            uce-63, sequence.
ACCESSION   KCPA01001480
VERSION     KCPA01001480.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 678)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 678)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..678
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="162809tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>678
                     /note="ultra-conserved element locus uce-63"
BASE COUNT          257 a          114 c          111 g          196 t
ORIGIN      
        1 cttcccagaa atcttttccc tgtaattaga acctttttat tatttaccaa ataaacagaa
       61 agaagtagaa acatattacc gtggcaggat attataccca tgtttcacac acctgaaaaa
      121 atatgttaat acaaataatt gttgtcatgt tagcatcacc agtttcaagc tgtctgaaac
      181 aattttacat tctcaataag gaatatttaa catttgaacc aaaaacagta cagcacgaat
      241 aattaaaggc ttaagttaaa tacatagaca gtcatttaaa tttagatctg caataacatt
      301 tactattatt ctctaaggct ttgactgtgc ttgacagaaa caaagtactc tgggattaat
      361 ttcaagaaat ggtgccaact gtgcgcaatt tgctgtaatt aagacatgaa agagtactaa
      421 atattcagat taaaagaagc atgatggagc atgatagaga atcaaggtgt ggcatcaagc
      481 caataaagca cagtcagtca tgaatgctca atagtgattg atatgaaact cctacaaact
      541 tgtagcacgt acttaactgt gcagataaaa tcacggccct gtgtcttaag aaaagggctc
      601 ttctaaattg gaagtcaaac gtgtttgaca tcttcaaaca agcctaataa tgacacaaat
      661 aagatgttta aagaatga
//
LOCUS       KCPA01001481             510 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 162915tic ultra-conserved element locus
            uce-7729, sequence.
ACCESSION   KCPA01001481
VERSION     KCPA01001481.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 510)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 510)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="162915tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>510
                     /note="ultra-conserved element locus uce-7729"
BASE COUNT          151 a           95 c           97 g          167 t
ORIGIN      
        1 ggcaggtctt tcatatgaag tgttcggaag cattaacatc cactgtgttg tcaggttatt
       61 tgtgctgttc tttttgctct gaacagaaag agagagcctt tattttcttg tttcccttct
      121 ttgcctgcaa tatctgtgtt gcaagtgcag tctgaccact atccccagtt gtctggcatg
      181 attaattaca gcatctgtcc tgtcagaagc tataatgaag aggtcttgat aaaaattgca
      241 aattaccact ggcaacaatc ttaaactgct tatgataaaa tgaaaattaa aaacagcaag
      301 tgtcaagcct gagcagaatc ctaatcctgc taccatgctc atggaatgga gatccccaaa
      361 aagttgtagc cagacttgag gggccatgtg agtttcttta taatgaattc agcttttgat
      421 atctaatcat cctcaggtac tctgtttatt atgtacaaat attgaacagc aaaagattct
      481 aattataaat ttatagattt cttggagcag
//
LOCUS       KCPA01001482             593 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 163023tic ultra-conserved element locus
            uce-6473, sequence.
ACCESSION   KCPA01001482
VERSION     KCPA01001482.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 593)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 593)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..593
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="163023tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>593
                     /note="ultra-conserved element locus uce-6473"
BASE COUNT          194 a          119 c          101 g          179 t
ORIGIN      
        1 tttaggagtg taagtttggg gtttgaggac gggaccaacc aaccatcctt ttgtgttcac
       61 catggagaga ggaaactgaa gagtctccct gacataatga accagatact gatacctgca
      121 aaacattctg taaatctcct tcatcccagc gcttccaatt acaccaaaaa gatttttaga
      181 agctttcaac tgtggacttt tgtcttgttg aatgaacttc agctacacta aattttaagt
      241 aaatttgtga tgactgagca atatacattg gctgagctag aatccaataa cccacaggac
      301 aaattaattt tcaacaaaaa gggcagaaac ctcaagtgcc atgagtatat ggaatctcag
      361 tctatctctc tggagccatt tttgcaaatc actacagcta ttcataatct aaatcagtct
      421 cctttagcag cagaaagatc ttttttcatg acaaaacaga agatgacatt cattagtgcc
      481 taacttgcat aagctacctt aaatttattg gtgctcttat acttatctgg gtaagaattc
      541 ctttgtctac agctatagga aaattccgga cgcactactt aaaaatataa att
//
LOCUS       KCPA01001483             351 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 163125tic ultra-conserved element locus
            uce-4404, sequence.
ACCESSION   KCPA01001483
VERSION     KCPA01001483.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 351)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 351)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="163125tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>351
                     /note="ultra-conserved element locus uce-4404"
BASE COUNT          111 a           67 c           66 g          107 t
ORIGIN      
        1 ttttagcagc tccttcctat aatttaccaa agcacctcac aaagagaatg gtaaaataac
       61 tttgaaagtc aggttattcc tatgccttcc aacagatgtt gttcttatcg aaagcagagt
      121 tccttgaatt attaatggtt cccaacagct cagcttgaaa taatttagca tttgaaagag
      181 aaaagccact ctcattattc caagtgcaga aacatttttg gttattaaag gtattctcct
      241 cgagaaatct gtacagtttg ttttcctcta gatgccagca ggagcaccag atccagggtt
      301 tgtgcttgct gaaggttaat tgataaaata caatggaaga gagaggactc c
//
LOCUS       KCPA01001484             237 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 163225tic ultra-conserved element locus
            uce-7386, sequence.
ACCESSION   KCPA01001484
VERSION     KCPA01001484.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 237)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 237)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="163225tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>237
                     /note="ultra-conserved element locus uce-7386"
BASE COUNT           80 a           58 c           55 g           44 t
ORIGIN      
        1 aacaaaaaaa aaagaaagga aaacaacaag aacttgtttc aaaagaaggt cttactaatt
       61 tcttgcccgg tgtgtcgccc aaggctgcga caatggcaaa gtactgaatg acccgcttgg
      121 tgtttacagt cttaccagca ccagattctc cgcttagagt aacagaaata aggacatgag
      181 gcaaaggcac aactcatcca gacaccctgc cgcgaagcct cgcggaggct ggagccg
//
LOCUS       KCPA01001485             763 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 163331tic ultra-conserved element locus
            uce-1242, sequence.
ACCESSION   KCPA01001485
VERSION     KCPA01001485.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 763)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 763)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..763
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="163331tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>763
                     /note="ultra-conserved element locus uce-1242"
BASE COUNT          223 a          147 c          158 g          235 t
ORIGIN      
        1 tgggtagaaa tattttccaa tcaaagaaca actgacatat ataaaaatga tgtatgtttc
       61 ttacatagtc cacagggaga attctgcagg cttgctatga tctctacaat ttgcctctgg
      121 gcaaacgagg ctttgggata ttctattatt cctttggtct gtttatcatg gaaactgatg
      181 tacaaatcga aggttctttt ggacctttcg ttttcctgga tgtgctgaga atgaacttat
      241 cacctgtcct caccttcagc aaagtgcttt ggggaaggtt cagtgaccaa taatcaatta
      301 ttattgagaa gcaatcaatt gctaatctcc ataattatgc acatctaaac actatgaaca
      361 agaaagagaa acaaagctgc actccaagca ttgccttgtt agcagtattt tgttaacaca
      421 ggctctaaaa aaagctgccg cagctggtag cacaaatgtg tttccagtat tcaggccatc
      481 aacgtgattc gtcgctaaat gtatagaatc agcttcttgc taaaaactac aattacaggt
      541 gatatacaga ttgaaatcac agggctggtt tgtcgaagaa aattgtccta atgatgggtt
      601 ttcggatcgg gaatgcagct cttttcttcc tctgtgatgg gtactgaagg cagctgcacc
      661 tgcctctgtg ctgtattctg ccgcacttaa tgatatctga tgatatcatt aggcaaagtg
      721 ttcataaaca gatgttgagc ctgtgcctaa atgctgtcag atg
//
LOCUS       KCPA01001486             635 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 163440tic ultra-conserved element locus
            uce-1367, sequence.
ACCESSION   KCPA01001486
VERSION     KCPA01001486.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 635)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 635)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..635
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="163440tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>635
                     /note="ultra-conserved element locus uce-1367"
BASE COUNT          190 a          146 c          109 g          190 t
ORIGIN      
        1 cacttacact gccagagcca tggccctttt ctaagtcagc agggtacagc tggcacaaat
       61 tcagccaagc aatcagattc ataccctttc acaagtcttt taaaaatgct gtgtctcaaa
      121 ccagaggctt atgcttgaga aaggtgtcca acacctgact gctcctatca aggagtatta
      181 cctgctcaca ttgatttgca gcaaagtatt tctcagtaag catttccact taacatttac
      241 tctcatggaa cctgtgtagt gggagatatt tacgagttgc tttcagctta aaaataaatc
      301 acctctaatt cctctaagcg aaatcaatca aaagtcttta aaaaatggac tggttgtttg
      361 gtcgattctg gcagaaaagt aaacagcact tcagcttttc tccaccatta aggtctaaat
      421 ggcctagaaa gtaaatcaat atctccagtc agccctctgg ctattgttta gccagtagat
      481 atggattttc tctagcttac tgcactcctt tgggactaac ctgtaatcct cagagagtaa
      541 taataagttc attatctagt tcagctctct gttgtacatt taaatggacc acatccatca
      601 gcagcacttg ttaaaggaca atgacatccc attca
//
LOCUS       KCPA01001487             398 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 163549tic ultra-conserved element locus
            uce-3181, sequence.
ACCESSION   KCPA01001487
VERSION     KCPA01001487.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 398)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 398)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="163549tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>398
                     /note="ultra-conserved element locus uce-3181"
BASE COUNT          122 a           68 c           85 g          123 t
ORIGIN      
        1 aaccataaga agaatgtaat aaaagtggaa ttgcctagca tatatccctg cttgaaatgt
       61 ttttacaagg gcatccttgt taccagagtg aaaaaaaaac cgtaaatgtt aactagaaat
      121 cactttcctt catcccacat ctttcccctt agtaaatgaa gacaggatga acagctaaaa
      181 ttactaattg gtttactgat cagttgtagt ttgttcgatt gatttgcaat taattctggt
      241 ttgtggtgca tagaagagga aggttggcgc caacctttga ggcagctgat actcaatatc
      301 ctccaagaga gctgtgggtc agaatatcaa taatctgttt tgaggcagct cctgaatgta
      361 ttgagactgt gtcttgtgca tttgtaagag ctctaggg
//
LOCUS       KCPA01001488             773 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 163660tic ultra-conserved element locus
            uce-6553, sequence.
ACCESSION   KCPA01001488
VERSION     KCPA01001488.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 773)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 773)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..773
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="163660tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>773
                     /note="ultra-conserved element locus uce-6553"
BASE COUNT          221 a          148 c          162 g          242 t
ORIGIN      
        1 aattgtaaag ctcttgtaga aatccctgtg tttggtcctt aaatgcattc cagtgagaaa
       61 ggcaagggct gtgagtgtca gcaagatatg ccttcagact gtttaggttt gattgcattg
      121 cattatagaa tgcttcatta ctggtttaac ctctcagagg ttttcagctg ctgttttatt
      181 tagctatacc gactacactg cctacagcaa ctccaggcaa tgattccccc agtggcatgc
      241 atgagctgcc ctgctgtact gcaaaaatac attatggctg aatttgccct cagagtttgg
      301 aaagatctaa agtctttgga gactaaaaat gtggtttttt ctttgtttta gctggcagta
      361 tgagcctctg gcattttaaa gtgcaagtca ttagcgtcca caagggtgat gttaatatgt
      421 ctgtgtttca atctcaggac attttccagt tgcttctgcc acaacaatct ctgccatctc
      481 agtgcttttt aagccccttg tgaattcaag taagctttgc aatgccagta aggatcactg
      541 taggctttgg ctgaaaccag ttgctacctg atttattctt ttgcaatagt tggcttggaa
      601 gtctttcaga gctgttatgt taatgtttag aaacattaaa cacaatgaaa aggaaagcta
      661 gaggaatttg aacatccaat tgagcagcta ttagaataac agtaataagt tgcacatatc
      721 ccagcaacag tggtaacaat ggcatccaga aataaaggca aactaaagga tca
//
LOCUS       KCPA01001489             745 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 163771tic ultra-conserved element locus
            uce-4883, sequence.
ACCESSION   KCPA01001489
VERSION     KCPA01001489.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 745)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 745)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..745
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="163771tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>745
                     /note="ultra-conserved element locus uce-4883"
BASE COUNT          235 a          163 c          129 g          218 t
ORIGIN      
        1 tttatatttt aacatctaga ctttgaggtc cagttacaag tgtttaccat agaaaactcg
       61 gtcaagctgg tgtttgacct ttgacaggaa gctgccctct ctccagctag tcccaacaaa
      121 ctaggcccaa gacaataagc tgctttatag ctattaggta ggccagtgtg tttctccagg
      181 aagacctcaa gctgaaaagc caacatgctt gacaaccaca gccaaggtac caagggccca
      241 agcactagac attggaaaac aaatggaaaa gcacacatgg ctacatctgg aatcctaatg
      301 ggccaccaat ggttcccagc taaaggaaga attaccaatg ttattttatc atcccttgtg
      361 ctaacttagc tgtttatgta cagcaataaa tgatttttta aaaacatatt tgggtcatta
      421 tgtcatatac caccagcaag tacgattgtt ttattgtgct tggagtcaaa atacactgct
      481 atacccagat gtgagggaag ttcaaaacct ctagtccttc tgtattcatt cctgttggac
      541 aaatggatta agtttttaaa agggaaactg agaattttta tggcctgtac tcccatctca
      601 ctagtaaaat tcgcactgat attttcctat agaagtttgc cttgccaatg ataacattaa
      661 atattacctc agtaagcaac ccaaaatttc aaccaacagg aaatgccaca cattttattg
      721 tcaaagcatc ctattctctt cttcc
//
LOCUS       KCPA01001490             506 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 163883tic ultra-conserved element locus
            uce-7397, sequence.
ACCESSION   KCPA01001490
VERSION     KCPA01001490.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 506)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 506)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="163883tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>506
                     /note="ultra-conserved element locus uce-7397"
BASE COUNT          154 a          150 c           77 g          125 t
ORIGIN      
        1 aagaaatatg ctaccaaacg ccagaagaag aagcgagttt aagagctgtt gggcttaaca
       61 gtggtttgtg ctgatcacac tcaaatcttt ctgcaaaggc atacatgcaa aaacaacaac
      121 cactaaggaa ccacttcaca tctgccatta acattattaa actccttaca agcagtatct
      181 accccacctt ccccactaca cacaaacaca cacacacccc cgagctctgc aacacagcaa
      241 ctaggagcca agacggctct cctctcctca ctgcagcaac cacattcatt cctgttaagg
      301 ggttaacgat tcatttccac tacttctctc gagaaaacct acaatgaaaa cattggctca
      361 cgaaagcgtt ctcactgcca gaatgccaca gcgcgagtga aaagtccgtt ttgttttcat
      421 tacatctctg ggatttccgg cttaactcct gagcttagac accaaatccc tagatacccc
      481 acccacccag tttttcttct tttttt
//
LOCUS       KCPA01001491             687 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 163993tic ultra-conserved element locus
            uce-4304, sequence.
ACCESSION   KCPA01001491
VERSION     KCPA01001491.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 687)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 687)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..687
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="163993tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>687
                     /note="ultra-conserved element locus uce-4304"
BASE COUNT          208 a          127 c          140 g          212 t
ORIGIN      
        1 gttgtaaatt ggatataagt acttaccaaa tgcaagggga gtggtttcca ctttggtctt
       61 tgtgtttatt gtttctgcac tggcaacaga attgaattca tagcagcagc aaaacaaaga
      121 cagctctgag ttatactgta atccactgct ggagatttat gaatattatt ttcctgtaaa
      181 acccagcacg ctttactact tgtaacctgt aagtggcata aaactgtgta cctagcagga
      241 tttcctattg cagagagtgc caaacaccag tgtaagaact gcactacatg cacatgtggt
      301 tatagactat gcataaactg tgcctttatg tttaacttgt ctaatcaact caccatatca
      361 aaacttaata agtagctgct tctcatttaa aggtctagta aaactacaat tactatggct
      421 gtaagattcc ttgtttcgaa aagagcatta aatagtttta tagatacggt tagaagatct
      481 tgtgtagttg tttttatgaa agtgaatgag ttcattaata atgggagtca gagacagaaa
      541 tacaagttgg gagttagtga aatatcctgc ctttgcatcc cttcctcaca ggtaagtcac
      601 ttctgccagg catggcgccc aataatacac ccagaggtga tgctttgtaa gcagcccttc
      661 ctctcaggga tagcgctaaa gggtgtg
//
LOCUS       KCPA01001492             703 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 164096tic ultra-conserved element locus
            uce-172, sequence.
ACCESSION   KCPA01001492
VERSION     KCPA01001492.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 703)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 703)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..703
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="164096tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>703
                     /note="ultra-conserved element locus uce-172"
BASE COUNT          166 a          153 c          140 g          244 t
ORIGIN      
        1 tagacctact ggttcctgct tttttctttt tttttttttt aatatgttat gttcgtaact
       61 tctgtctgtg ttgagccaat cttaccaact atcaattgtt tcctgtttct ctacttcttt
      121 acaaaaaact cttaatggga accctggcac tgtctgtctt ctctgttctg cagaaatgtt
      181 gaaggagttg aaccagcaac gcagagcgaa agagtttaca gacctgaaaa ttattgttga
      241 aggcaaagag tttgaagtcc accaaaatgt tctagcttcc tgcagcttgt atttcaagga
      301 cctgattaaa aggtttgcct tccttccagc tgtgatctgc tctgttcttt tgtagggcgc
      361 atttgtgtcg cttttttttc ctcccctctc ttgcaggttt atgaagattg aatctcctgt
      421 cacagagcca gtagccattc tttccacctc ctctgaatgt atttccaaac tgagactcag
      481 atccatttgt tacacatctg actcgtacac tgtaattatt tctgatgagt agaggctggt
      541 tttggccgaa gaaagtgttc caccaatcta agattttgtt aatggtgatt cagtccacaa
      601 gtactgctgt cgatgtttgc aagggactct gtcacacccg acaaaagtct gtgcttcagg
      661 ctgcagaaag ccatcagtgt tcaggtgaac ggtgctgaga cat
//
LOCUS       KCPA01001493             494 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 164197tic ultra-conserved element locus
            uce-4079, sequence.
ACCESSION   KCPA01001493
VERSION     KCPA01001493.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 494)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 494)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..494
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="164197tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>494
                     /note="ultra-conserved element locus uce-4079"
BASE COUNT          165 a          101 c           86 g          142 t
ORIGIN      
        1 cagaattgaa agtttacact ccgctttaga gcagtttggt gcagcacaca aaactatttc
       61 aatattgctt ttggagccga caaacttcat gttacttcac tacacaatac actgaaggct
      121 agtaattatt aggacatgtg gtaggcgttt atcaccacta gcatcacaca acctactcta
      181 tgatcaagat aaaatagggc aaatggttca attaaaggca cattctttgg tgcataacaa
      241 tagaaggctt gtgacatggc aagattaaga aaagactcaa acatttttaa aactactcat
      301 taccaccact gaaaacgtgc atgtctgacc tttatggtaa tcagcaattc tccatttgca
      361 cactatagaa ctaaataagc tttattttag acacacagag ttacttgtgg tggcctgcag
      421 ttaacttagc tgatctcaga gctgatgctt gcaatgaatc aatggccata atgacaggcc
      481 atcatcttta tcaa
//
LOCUS       KCPA01001494             414 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 164297tic ultra-conserved element locus
            uce-2162, sequence.
ACCESSION   KCPA01001494
VERSION     KCPA01001494.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 414)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 414)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="164297tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>414
                     /note="ultra-conserved element locus uce-2162"
BASE COUNT          113 a           81 c          101 g          119 t
ORIGIN      
        1 agacgctaag atgaaaacaa aatagtttac atatggggtt ttgatggaaa ctagggctgg
       61 gttttaagtc aaaactcacc atctcaaaac cacttctttt catccgcctg caggacttga
      121 ggtaagtacg tatgcgcttt ctggcacgct cttgatactc agggaattgt cgcctgcatg
      181 agtcaatgat agcctggatc ttttctttgg gctgcttaga gattgggacc attcggtcca
      241 agttttcatc tacaaacagc ctgacaaaca tctgttggca agagggagac agaggagatg
      301 ggtttggagg gcagctctct tctcttccta gcttcctggc ttgattactg ataggaagac
      361 atttgtaacg ggaagccaga aatataaagc aacagttctt taaagggtta tttg
//
LOCUS       KCPA01001495             567 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 164407tic ultra-conserved element locus
            uce-5871, sequence.
ACCESSION   KCPA01001495
VERSION     KCPA01001495.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 567)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 567)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="164407tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>567
                     /note="ultra-conserved element locus uce-5871"
BASE COUNT          163 a           85 c          116 g          203 t
ORIGIN      
        1 aaggcacacc ttggggagga aacagcaact ggaggttgtc acaactgtac ctccctttag
       61 ctttacacat gattgttgca gcttcaagat tccatgttac atctttaatt gtgggcattt
      121 agcagactgc ctcttattat taagatactg ctgaatttta ttgtcaatgt ggccacagga
      181 caaggctaat aattaccagc accagaagca gcttgtggtt ttatattaca ttgaggtaaa
      241 ttacactgga attagagtgg attactttta tcaaatgggg aataagctgt taattaactc
      301 cctgctgtag caatcttttt ctgagcttgc aactgttatt agctctagat taaactgttg
      361 aattaatttc ccacttactt actatttcaa gagtttttaa tttacctggc agcagtttta
      421 atgggaaatt gtattagtga gcataaattg tttttgggaa gggtaaacag tttgtgataa
      481 tgtttattaa gtcgttttgt ttgagcaaaa atataattgc agttttaatt agtgcatggt
      541 tgtcggagta ttaggtttga gattaca
//
LOCUS       KCPA01001496             681 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 164520tic ultra-conserved element locus
            uce-1917, sequence.
ACCESSION   KCPA01001496
VERSION     KCPA01001496.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 681)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 681)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="164520tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>681
                     /note="ultra-conserved element locus uce-1917"
BASE COUNT          203 a          122 c          151 g          205 t
ORIGIN      
        1 cagacatctt taggatctag ttttcaaact ttcaggggtg tttctataaa tatattttgg
       61 ctgtttttta aagtgggctc tttggatcca atttcttgac attccctggt tgacaggtag
      121 aaaaccttca gattttaata acaataaaaa agtgtacaag cttcatggtc aagacaggac
      181 agtgggcaca aaatagttat cttaaggcaa aattttctgt tagggaaaat ggaacattcc
      241 ttctgaactc acgaactggt agtgcatgtg caggttggtt gtagatggtt gctacaataa
      301 ggcttctttc atacaggtgt gtttatgccc caggcttgct ggccacagtc cattccattt
      361 acagaagctg aattaaacaa taactaccgc attgcaaaaa gaagaaggaa aaaaaaggtg
      421 aaaggagatg cctgagagct ttgttagggc caagaaaaac cctgttgcag ttgtcagagc
      481 ttgttgatgt tgcagagaat ggcacttttt tttttctgct ggattttgtg gttctgcctt
      541 aggaaagaaa gtaaaataga acggaagaac aaagtcctac tctataaatc agcagctgct
      601 ccttgccaga tcaaagtttt gctcctggac tacttgtcca ctttaggtgc ttgacagaca
      661 gctaacagct ggcctgttac a
//
LOCUS       KCPA01001497             502 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 164627tic ultra-conserved element locus
            uce-7541, sequence.
ACCESSION   KCPA01001497
VERSION     KCPA01001497.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 502)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 502)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="164627tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>502
                     /note="ultra-conserved element locus uce-7541"
BASE COUNT          185 a           95 c           84 g          138 t
ORIGIN      
        1 accgtctgtt aatcttagtt gtgattaaag aggtaatcct aatgcccatt attcctaatg
       61 acaagaccaa gcaggcttaa agcattagcc gtcggaggcc aaagagaaga agcaatgaag
      121 gatatcagca atcttagcca caattgagga attggcccgt cctctacaca acaaaagtga
      181 tacaaaagaa ttacaccctc actaaagtct atttcctcgt ataatcacac aaaatgattt
      241 ttcttaaata tgataataaa tcacagctaa aaatcaatgt ggcagggtcc aactgctatg
      301 gcctgataac gcatcaatca atatttagta tttagatttt aattaataca tagcaaagca
      361 gaggcctttt aagagagaaa tattatctca gataaaaaat cctgcactgt tagcatgcaa
      421 aagttgtttc tcatatctgt cattgatcaa tctgctggag ttgtgattaa aaccccttga
      481 aaatatcaga caagagcata aa
//
LOCUS       KCPA01001498             699 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 164737tic ultra-conserved element locus
            uce-6054, sequence.
ACCESSION   KCPA01001498
VERSION     KCPA01001498.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 699)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 699)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..699
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="164737tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>699
                     /note="ultra-conserved element locus uce-6054"
BASE COUNT          224 a          123 c          126 g          226 t
ORIGIN      
        1 aaccgtgtct catgagattg cagtgtacat ccagcccaca gtaataatga ttcatataca
       61 tatatgtgta tatgctttat tgctaccttt agttggatta aaagcaatat atcaaatttt
      121 atatttctgc ttctttatta gctttctagc acttgatcag ctgatagagg ccataatgaa
      181 atgttttttt ataaactgga gtttgtaagt cctgtcctga gaatgcaata tttcaaaaaa
      241 tagcctaagc tttaaaaaac caattacaga aacagcatta aaaatgccaa gcagtgggca
      301 gaagcaattc tggatcagtt taaaaaagtg attgatgaaa ctctaatctg agctgaagga
      361 acagtttcac gacaagctgt gaccattcca cacacttcat tagctgccat aattagcctg
      421 gtgtttcaat ttgttagaac tggtggggac aattttactc agaatgcaaa catcaaaaaa
      481 cagggtgcct cagacttcag aagaggctga tgagaagctt ttctagtctc tgttaactaa
      541 aagattaatt acagctgatg ggaggctgta ctctgattgt cactctgtct atgtgcatta
      601 cttttagcat tagaagaaag acatggttga cactacactg ctcaatcaag cagctttgca
      661 ttagtgcaat atacaatatt tttatttgtc tttttcctt
//
LOCUS       KCPA01001499             475 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 164845tic ultra-conserved element locus
            uce-1706, sequence.
ACCESSION   KCPA01001499
VERSION     KCPA01001499.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 475)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 475)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="164845tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>475
                     /note="ultra-conserved element locus uce-1706"
BASE COUNT          129 a           83 c          118 g          145 t
ORIGIN      
        1 gtagtcattg ctgggaaaca cagcaaacag tttttgtgtt ccggtgtaag tactgaaggg
       61 cagttgtctg ttttttgctg tcttacttca acagggaaaa ccatgaaacg gagaagccag
      121 cactgaacaa tatagcggac aatacagtag caatggaggt gacgtagttt ccgtaggagt
      181 gggactgcag ccttgggaac ttgtttaggt gctatgcatc agtagcattt tgaatgcaag
      241 ggatgatgga atgccgcaca ttgcgtttcc atggcagctg tggggacttg acagcaatgc
      301 acatctctca tgctttggtt tttcttttct tactgttaat aggaaagaat caacacctgt
      361 aaattaacaa tacagcaatt atctgtacag tactgcatat ttgtaatacc cttgtatata
      421 tgttacttga atacaaaact gttcatttgt gatgctttgc acttggggtg ggggg
//
LOCUS       KCPA01001500             444 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 164956tic ultra-conserved element locus
            uce-2671, sequence.
ACCESSION   KCPA01001500
VERSION     KCPA01001500.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 444)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 444)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="164956tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>444
                     /note="ultra-conserved element locus uce-2671"
BASE COUNT           87 a          126 c          126 g          105 t
ORIGIN      
        1 ctggggtgag cagcaggtcg cgtctcccac ggacacaagc aacttcgaca gcttcccaga
       61 ggacagtgac gagccacccc ctgacgacaa ctcaggatgg gacatagatt tttttctctt
      121 acctgcttct gccttgctga ggacagcttt tcctgggacg tggctgccag cggaacggga
      181 agaccggaat cggggaggat tcatgctcgg ggtcaccacg atgccttgat tgatgctgct
      241 cctccagtgg cattaggact tctgacaata gtgctctcca tgttttctgt tggaacgtga
      301 cctggcggtg gtcctggcac ctgtcgccgc gatcagcaga cgagaggcac ttatttccag
      361 ctgctccgta gggtcagtag taacttacga agtgctgcag ctactccagt ttgggctatt
      421 cccaccctct gagctccgca gggc
//
LOCUS       KCPA01001501             456 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 165062tic ultra-conserved element locus
            uce-7971, sequence.
ACCESSION   KCPA01001501
VERSION     KCPA01001501.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 456)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 456)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="165062tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>456
                     /note="ultra-conserved element locus uce-7971"
BASE COUNT          173 a           73 c           75 g          135 t
ORIGIN      
        1 gtagctgtct ttacattaac cacatttagg aaaaacaaca actttaaact tcctatataa
       61 gtgtcagtgg aggcactttg caaacgtcac tcttcactgc agaaagcata acagagagct
      121 atataagaag tgacagtaaa tgcattttat tttaaaaatg gaccagtagg acaatgctaa
      181 tgagtagatc tgccaataaa agaaactaga cagttcagta aaacaaatta atctgtcatc
      241 cccagggaac ttaaacaggg catgaaatag ggaaacagca tcaattcaga gctttttatt
      301 gatgcgttgt gctggatcat ttgatagaat tacaaaattt gcaattttct attgatcata
      361 aattcagtag ctatctctat gtagccttta ttcaatatag tataaaatca aatgccacag
      421 aaatgcaaac ttaaagatta tttttgaaat aatagt
//
LOCUS       KCPA01001502             437 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 165170tic ultra-conserved element locus
            uce-2840, sequence.
ACCESSION   KCPA01001502
VERSION     KCPA01001502.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 437)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 437)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..437
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="165170tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>437
                     /note="ultra-conserved element locus uce-2840"
BASE COUNT          108 a          113 c          103 g          113 t
ORIGIN      
        1 gcgtgtagga gaataggtca gagctgaggc cttgaggatc acagatgcct catggatgtc
       61 cctctgaaat aagcaggtgg ctctccagat gcttgttaat aactcaataa cccatatctt
      121 ccagataatc gttatgtacc ttcaggtatt agaatgtgaa cgtaaccaac acctggtcca
      181 gacctcatgg taagttgaga gagaccagaa ggggcagtag cagaaatatg tcactgggca
      241 gcattgctca gcagtgcttg gggccacccc agacagctcc actgtccttg gtgtgcccca
      301 aactacttcc caaatgttga gcggcctctt gaggcactgt tttaatggta aggtagcttt
      361 ccaccctgac ttctcacttc cctcctctcc gtttccagct gaaaaatggc ttttcccagg
      421 gcctgagctt gattcca
//
LOCUS       KCPA01001503             639 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 165280tic ultra-conserved element locus
            uce-6890, sequence.
ACCESSION   KCPA01001503
VERSION     KCPA01001503.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 639)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 639)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..639
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="165280tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>639
                     /note="ultra-conserved element locus uce-6890"
BASE COUNT          171 a          127 c          131 g          210 t
ORIGIN      
        1 ttgtcagata atgagatgaa aacattatat tgaactttct ctgctcattt ttgaatttgc
       61 caaacatact tgtgtcctcg ggtaagtggc gcttccgagg gtgccacaga tgccaaaccc
      121 tgctaaaatc taccctatct tgttaatgaa cacaaacagt tgttccccat ctgctgcctc
      181 tgtctgaaag gttagttcct tcttgatcac aaaggacata attattgtct gtggaggagt
      241 caagtacaaa gacagtccat ccagtctgac cgctactaca ctgcaggcca ccaaagatta
      301 acagctgctt ctcctttgat taggttaggt aataacagtt actttagtta ataattggat
      361 ggattcccag gccatgtaat tcaggtttag gctgtcattt tttgctggca tgtagctgag
      421 ctgtattatt ggaacagagc ctgtaatcct attagtcagt tgtcactcaa gccacaggag
      481 agaagggaaa ttcagatcca ttaaggtgtt ttaacaggta tcagccatgc ttgtccactg
      541 tgcagggagc tgtcttgatt gtttgtcagg attgattttt ttaattcata attaatccat
      601 aaaatggttg cacggtttgt ctaatttatc actgtttct
//
LOCUS       KCPA01001504             570 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 165392tic ultra-conserved element locus
            uce-6608, sequence.
ACCESSION   KCPA01001504
VERSION     KCPA01001504.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 570)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 570)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="165392tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>570
                     /note="ultra-conserved element locus uce-6608"
BASE COUNT          165 a          115 c          127 g          163 t
ORIGIN      
        1 ttttccaatt gactaagttt ggtctgcagt ggcccatgaa catggtctcc agtgatctat
       61 tagtaaactg ggatgtagcc ttccttttac tggcctgtta gctcactctc ttttcatgtt
      121 ggaatatatt acaaggagca tggcattcaa ggcaacgaaa tgccctatta tggagcaaaa
      181 gtacacgttc caattttgtg aggctacaaa gactcaggag ggtatgagaa ggcagtcaca
      241 cttcagaaaa agacaagctg ctgtggaaga cctttccttt ctagtttggg gaaaagagaa
      301 acttctgatg cgctcactgg aaaacagact gcataatgga gcaagtcatg tggattgccc
      361 agagcctccg gagaaataag ggagcaattt ctattccgta gttgatggct gtctgaaatt
      421 ctattcacaa atccaaacag aaacaaagcc tcaggaggtc acaactgctt cctcgacgtt
      481 tgcataatgg gcagctggaa gacaacgtct aggatacctg ctgatcaatt taactacttc
      541 aacatgtttt gtttgtattc tgtttatatt
//
LOCUS       KCPA01001505             542 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 165498tic ultra-conserved element locus
            uce-7234, sequence.
ACCESSION   KCPA01001505
VERSION     KCPA01001505.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 542)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 542)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="165498tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>542
                     /note="ultra-conserved element locus uce-7234"
BASE COUNT          201 a           95 c           79 g          167 t
ORIGIN      
        1 tactttagac agtaaaaagg cattactttg ttacatcata taaacatgta gatttgattc
       61 tctctttact catgctgtaa aaagaaagtt ttaaagtgtt tagccatacc tgaaaatgta
      121 aatgcccaag cctaatgtaa tgctgaaaaa aaattaagat aaatgatact gcatccgtgc
      181 cacaaactgc agcttgtaca aaattcactt tagttattat actgtgaata cgtgtgctaa
      241 acctcctctg tgtatgcaca atttatgttg aatgcaacat gaatcatttt aatagaccaa
      301 gcaaaaagtc cccaaagtca attttcaaat tatgaacctt ggaacagaat atagcaacaa
      361 tgaacaacaa atagttcaga ttttacgctg aactacaaat gaaccattaa aggtacagta
      421 tactcattca gtttctcctt atcatcacag tggctaaaaa gcataacaaa aatatttctt
      481 aaaggtcagt tctaaatttt accttattaa gaggcacatt catgagagct catggaggtt
      541 tt
//
LOCUS       KCPA01001506             598 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 165606tic ultra-conserved element locus
            uce-2801, sequence.
ACCESSION   KCPA01001506
VERSION     KCPA01001506.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 598)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 598)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..598
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="165606tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>598
                     /note="ultra-conserved element locus uce-2801"
BASE COUNT          186 a          113 c          113 g          186 t
ORIGIN      
        1 ttgagataca ccatggctca tcttttgtga agtgacttaa ctgtctaaca taaagggcat
       61 taggtgtctt tctaattggt ttaatcttaa ttgggttgac ttaattgcag aaatctctct
      121 gaggagatga ctgtctctgc ctttcatctt ctccccctgt ataaacagga gattaaaccc
      181 ccactcattt tctgcagaaa aacgccccta cacctgcgag gtttgcaata agtccttcaa
      241 acgacttgat caagtgactg cacacaaaat aatacacagt gaagataaac cttataaatg
      301 caagctttgt ggaaagggat ttgcccacag aaatgtttac aagaatcaca agaaggtaaa
      361 gcactctgct gttgttgttt acaggtctgc cagcctcaga tttgcaggtt tttgttttaa
      421 gtggttcatc gttaagatct gccatgcttg taaacatggg attaaagtat tggagagtgt
      481 gtttttagtg tttgttatat ccaaaatctc aaaaggctga atcaactcca ataaaaaagt
      541 taaataagag taatgcacac ttgcttggtt aaaagcatca aataaatccc attttgac
//
LOCUS       KCPA01001507             582 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 165712tic ultra-conserved element locus
            uce-519, sequence.
ACCESSION   KCPA01001507
VERSION     KCPA01001507.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 582)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 582)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="165712tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>582
                     /note="ultra-conserved element locus uce-519"
BASE COUNT          181 a          112 c           97 g          192 t
ORIGIN      
        1 ttatgcctgc aatattttag atccgtttgt ttgaaaaatc tgtcttctgt tttgttttca
       61 taaagaatga aaaccctaac ggagtccaga aatctgttaa tggtactaaa attataacag
      121 tatagcaaaa gaaaaaaccc cacacagtaa agtctatatt atatattttt tatgtcttta
      181 aatggaattt acagttctcc ctggcaatgt gaatgaacat cctataattt agtcaattta
      241 cagattacag gttcaaattg accttgtagc ccataaaatt gctcatcttc agtgcaggat
      301 tagaagtggg aaaagaatgt cataactgta tttaaggaat ttaccataac aatggaaagg
      361 aggatatgca tgcataattt tagccactct tgctcacatc acagttttca attctgaaac
      421 aatgcatatt ctgtgctctt ctcctggtta accatggtgg agactgtttc aatttactca
      481 cccacagaca tgacacttgt attccctcat cccaaggtgc ctcttgacat ggtttctggc
      541 atctccaagc tgagctgttg caaagtggca tatcttgcac tt
//
LOCUS       KCPA01001508             444 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 165816tic ultra-conserved element locus
            uce-7244, sequence.
ACCESSION   KCPA01001508
VERSION     KCPA01001508.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 444)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 444)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="165816tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>444
                     /note="ultra-conserved element locus uce-7244"
BASE COUNT          143 a           50 c           86 g          165 t
ORIGIN      
        1 agagtatttc actgattttc ttaagcttaa atggtatttc agttaatttt aaagtaagat
       61 ctgaagcatg ggattgagtt ttgaatatcc atgtttatac tttgttctca ttaggtacaa
      121 tgaagcaaat cttccatata attgcattag tgatacgtga cattaaagct taattggctt
      181 attttaaata tcttgcacat caatttcctt cagattgtga aaattgaaaa ggtcatgagt
      241 gcagtttttc cagggtgaga gatttcaatt ttagtacaat ttgtagagat ttaattagga
      301 aacatgactg gatgttgaat gcaaattagg ctgttcatta gagtatagaa gctgaaacat
      361 cttgaagtat tgtggaaatt tgattgcaga ttcagtaagc accttgattg aaaagtagaa
      421 tttattgtaa ttgttcttca ggat
//
LOCUS       KCPA01001509             550 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 165927tic ultra-conserved element locus
            uce-7726, sequence.
ACCESSION   KCPA01001509
VERSION     KCPA01001509.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 550)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 550)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="165927tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>550
                     /note="ultra-conserved element locus uce-7726"
BASE COUNT          166 a          132 c          115 g          137 t
ORIGIN      
        1 aaaattgctc ctgtccaata acatgctcaa agtactcctt tgccagaggc attcactcat
       61 tatataaatc aaacaagcat acaaaaacag acaaaaagtg actggtaatg cccagtgaat
      121 ttctgtgctc agctaagatg atttggtgca ttgcatgcag atgtcaggta tttttataaa
      181 gagctccatt gtgcagggcc ccactactcc tccattgctc ccagcactcc cttaaaaggg
      241 gggtggtggg cagacaacca ttccagctgg gcttggaacc tcgtctgagt caggaaaacc
      301 acagctcata agcaaagagg aagcataatg ttctacaagg acaaaacatt agcaaaaatg
      361 tcactcagcc ccagttccac atgttggctg ccacggcctc ttcctcctag catgcccgat
      421 tgatataaat tccatctgct cagcagccaa gtgacagaga agaaatacca gcatctggtc
      481 tctattgctg tcgggttttt gttccatgtt agaccttagc tagaaacata tgaagaaatg
      541 aaggtgctgg
//
LOCUS       KCPA01001510             538 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 166036tic ultra-conserved element locus
            uce-6546, sequence.
ACCESSION   KCPA01001510
VERSION     KCPA01001510.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 538)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 538)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..538
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="166036tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>538
                     /note="ultra-conserved element locus uce-6546"
BASE COUNT          142 a          110 c          129 g          157 t
ORIGIN      
        1 ttttagcatg taattttccc tttgtctctg accagccctg cgctccttgt ttttctggct
       61 caggagactt acacagagca atgcgttata tcacagaggt gtctagggga aacagctgct
      121 ctcttcttat ttttattctg aactgcccca cagataacta attgcagctc agttgcttct
      181 attagctatt tacctaaaat tgagctggct aatgaaaatg tttctaatta atatgaggca
      241 gattaaaact cattacagca aggtcgtcag taatgagaga taatcagagc acaaatgacc
      301 gagcttggag taaaatgaag atggcaggtg atcggtgctg gttgtgcatg catcagccaa
      361 caagggcagg gttcagcaag gtgactgctg gtgctctgcc ctgcagttga gaaacgctgc
      421 ttcctactct ccagagcggg gagtgactgg ccagcctagt gtaaaaatgt ttaagtggca
      481 tctcacagtg gtttgttgct aggccagcct tcagttatct ataaagttgt gaatagag
//
LOCUS       KCPA01001511             696 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 166147tic ultra-conserved element locus
            uce-3759, sequence.
ACCESSION   KCPA01001511
VERSION     KCPA01001511.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 696)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 696)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..696
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="166147tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>696
                     /note="ultra-conserved element locus uce-3759"
BASE COUNT          255 a          127 c          115 g          199 t
ORIGIN      
        1 tttccagcta cacaccagaa ataatactat tttcacaata taaaactcta aagtgcgcca
       61 tttttaaata acaagtgaaa cttatttaca gaaacatggg atcaatagga ctacataata
      121 ttgaaaaagc cttcagaagc aaaaataaat aactcggaag tcacattcct caaattccct
      181 tttaattcca aagtacaaca gaaaggcatc atgaaaaaaa cagtatttcc cttctttcat
      241 taactcatct gaaactgcac tgaattcaat aacattcctc tgctattcta agcttgaaag
      301 gcatgctcgg ggtaaagtgt tatgttggta taaagcacaa tgccagactg atgtgctgga
      361 caaaagtgat caaagttgaa gtaattttag ccaacgcaca agtattctgc tgcattattc
      421 taccagaatg acatctgttg agcaactcgt cacagaataa accagttgtt ataggcaggc
      481 ctggctgggt aggggaccat gtaagactga ttagagtaat gtttgattaa acaaactgct
      541 tgagttaaga tcataactgg atttggaatt catgccaaag tagtcctctt tcaaacaaca
      601 agccacaatc aattatttaa gataaaataa gctcgctttt aaataatggt ttgatttctt
      661 tgataattag aaccattacg aaagcagact gtaaaa
//
LOCUS       KCPA01001512             447 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 166248tic ultra-conserved element locus
            uce-6411, sequence.
ACCESSION   KCPA01001512
VERSION     KCPA01001512.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 447)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 447)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="166248tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>447
                     /note="ultra-conserved element locus uce-6411"
BASE COUNT          134 a           85 c           96 g          132 t
ORIGIN      
        1 aaaacagacc tcagaaattc ccagcatgtg gcccattttc tgagtggatg aaactgggct
       61 ttccagttct tgcaactgca ttaagtcatg taccatcatt ttcaagtaat ttaatcatga
      121 aaaatttgga agcaaacaga tattttactt aatagaaacc atctgcactg tacagtaggc
      181 aaattgtata aaaatgaata aaactgtctc tggaggaaaa tgactcaggc accagcttat
      241 ataatgaaga tgtatatgtg ccttttagca tttgcattgt ctattagagt aggtaaatcg
      301 cagtgctggt gtaaggaaac aactccagat tttattacca tcctgtgact gatggcaaag
      361 gcagcagggg aatcctttag agggggttgc tccacacctc aaatgcttta ctggttttcc
      421 ctcacttggg tgcgtggttc gggcctg
//
LOCUS       KCPA01001513             283 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 166354tic ultra-conserved element locus
            uce-7960, sequence.
ACCESSION   KCPA01001513
VERSION     KCPA01001513.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 283)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 283)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="166354tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>283
                     /note="ultra-conserved element locus uce-7960"
BASE COUNT          104 a           36 c           73 g           70 t
ORIGIN      
        1 gagtgaaggt tgattaaaaa agagagggac tcaattaaga gatggtggtg caagtcctca
       61 gctgctggca gagacacagt taacattgta cacggttgaa cttcagcatg gcacttctcc
      121 aaatgagttg actgttgaaa ataaaatgtt ccagaagaac tgggagaaca ggaaagaagt
      181 taaaatagca tggtttgtat gccagtgctg aaagaagaaa aaggaaggga gatagattga
      241 cttatgataa ttatcttaaa ggtctttagt agaagtttcc aaa
//
LOCUS       KCPA01001514             716 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 166461tic ultra-conserved element locus
            uce-3528, sequence.
ACCESSION   KCPA01001514
VERSION     KCPA01001514.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 716)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 716)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="166461tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>716
                     /note="ultra-conserved element locus uce-3528"
BASE COUNT          231 a          146 c          133 g          206 t
ORIGIN      
        1 agtatacagg ttaattaatc ctacaattaa tactgcagaa tgtttggatt taacttgtgt
       61 gtctgggaac atgtactagg gctttaaagt ttgatttgta gcatcagtct caaattttac
      121 aacctgtcat aattaattca atcccctgca ctttgaaatc tccacaataa taagaacttt
      181 atcatgctgc tgtcggtatg aagtagcaca gcaaaccgaa atcccaccgg gagcagtcta
      241 gagccctctc ttctaagcag caaaatgctg ttatcatttt ctgaattaca ggaactataa
      301 aaggacactc tactcaagct gccgctgaat gtcacctgaa aagcaatcac aaaagggctc
      361 tgtcttggct tatctctgag ctctgtcact acggcaacca gcagggaata agtatctgtg
      421 ggtctatgaa tttaagaatc ccataaaagc cagggctaaa aaggcatgtg cagcctctca
      481 aagattgact gcattaatac attagcaaat actgtgaaac actggataaa tgtcagcaat
      541 tatggaaaaa gcatctaata acgatattcg ttgtctgtca aacccccgcg aggtttgata
      601 tgtaactgcc actcaaagct gtctgtaatt ttatctcaca tctgaatcca catcattcaa
      661 atttgtactt tgaaagtaat aaaagtgtaa aagcaggatg ttctgtgctg atggca
//
LOCUS       KCPA01001515             414 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 166564tic ultra-conserved element locus
            uce-7772, sequence.
ACCESSION   KCPA01001515
VERSION     KCPA01001515.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 414)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 414)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="166564tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>414
                     /note="ultra-conserved element locus uce-7772"
BASE COUNT          152 a           77 c           55 g          130 t
ORIGIN      
        1 aaaaaatctc tcctttaaag aatacataaa gctctcataa ctcttctatg atgtcagtgt
       61 atctcacctg acaataccac tagtatgcat agtagaacat ctcatatttt atagtatcca
      121 ttttataaat aaattggcat tttccatccc gtttgtattt atcatcagct tcacaaagaa
      181 accagtaaat aaaactgtca aggacagtca caacaaaatg atctcacatc aagatataaa
      241 acttgaagat actaaaagat gcttcttttt acataaaaag acagatttaa aaagtgcaag
      301 gcaagatttg cagggaaagg gaatatgtta tttttaggca catccacttc tttaaagcaa
      361 gcttcagaat gaaattccag ttcgttcttc atgataccgt tttaaagtct ctct
//
LOCUS       KCPA01001516             606 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 166674tic ultra-conserved element locus
            uce-4345, sequence.
ACCESSION   KCPA01001516
VERSION     KCPA01001516.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 606)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 606)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="166674tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>606
                     /note="ultra-conserved element locus uce-4345"
BASE COUNT          200 a           90 c          124 g          192 t
ORIGIN      
        1 tctcagtttt cttagctgga aacagatgag gaagttcagt gaagccatta aagaaagtta
       61 agattgcaga ttaaaagtct tattaaaacc ctctatccag tgctgtgttt cttcattcct
      121 gacctgtaag ggttaacaat tgaggcctgc ctatagctca tttctatagt aacagcaaga
      181 ctgagacttt tttatgggca cctaataatt agaaagtgct agaaggtata acaatataat
      241 gaatcaaaac tgatagactt gtgggtttcc atagaaacat gtataattat gataatcggt
      301 ccctggcgta ccctcagaat cgtatacatt cagttaaatg caataaacat taggcactat
      361 ttagtgagct gtgatgcaga ttaacagtgt gagatacagg gaggctatga ataaaattgc
      421 tgtacagttt atctcaaact aatttcccag attgctttaa tagatgtgct acgtggatgt
      481 gaagaattga aagtgtattt ttgttagtgg taaagctaac aaagataata tttcataaag
      541 gctgactgtt aattttgatg cagatcaaaa tgtactgtgg cacgttattg catgggagat
      601 ttctaa
//
LOCUS       KCPA01001517             387 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 166780tic ultra-conserved element locus
            uce-6707, sequence.
ACCESSION   KCPA01001517
VERSION     KCPA01001517.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 387)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 387)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="166780tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>387
                     /note="ultra-conserved element locus uce-6707"
BASE COUNT          131 a           71 c           88 g           97 t
ORIGIN      
        1 tttgagctac taaaaggtag aaaacaacca gggagaatta tgaccaaatg ccagatatta
       61 aaaagttctc cacatgtggc acagaaagaa acagccaatt cactccaatt gtctgcttaa
      121 caggttgagc ctctctccaa ctggtagcaa tcaggcagga cactagagcg ggcaggaaat
      181 ctaaaattag gttttactac ctataatgga ggatttatgg gataatttaa ttggcagtct
      241 tgggactgaa acccatggtg ggggaacaaa aacatctttc tggatatact ccctgaaccc
      301 ttcctgtagt gggctgaaca ataaaagtac tggggaaata acctgagatg taatatcaaa
      361 gcaattggtg catgacaatg tttgtgg
//
LOCUS       KCPA01001518             408 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 166884tic ultra-conserved element locus
            uce-7128, sequence.
ACCESSION   KCPA01001518
VERSION     KCPA01001518.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 408)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 408)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="166884tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>408
                     /note="ultra-conserved element locus uce-7128"
BASE COUNT          123 a           63 c           60 g          162 t
ORIGIN      
        1 cactttttgt ccatctttcc atggtctgtg ttgttttcta tcatcattat tcaaaacatg
       61 aatagaagtg aatatcctct aagttatgaa tgtaatcaat tttgagtctt taattgtaat
      121 tttttttcca taaaattctt ttaatttagt ctaatataat ggcacatcaa gcagtaatgg
      181 gtacattaaa ttgaatcatg atgttcatat acacatttta tgacacaatc aaatatccca
      241 atgcattaat tcatgtcaat cagttaataa aatcaaatag gaaacatttc tctagtgctg
      301 ttaactgcgt ttctcccatt tagagggtga caagatggcc tctgtatctt gtctagttag
      361 tgttttcttg gctatattgg agtcaatatg tttacttact tgatgagt
//
LOCUS       KCPA01001519             472 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 166992tic ultra-conserved element locus
            uce-6164, sequence.
ACCESSION   KCPA01001519
VERSION     KCPA01001519.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 472)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 472)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="166992tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>472
                     /note="ultra-conserved element locus uce-6164"
BASE COUNT          154 a          103 c           84 g          131 t
ORIGIN      
        1 ctcatttcat cagttaaaat gcctagaaac atttcaagtc atcctgcccg gtgttatcgg
       61 taaggctgat aggaaaaata ccagcacggc tgttacaggc aagcatctga agcctccctt
      121 gtccttcccc caagtgcaaa ctttgctgtc acctataaat caaacagttt atgaggctgc
      181 aatatttaca ccctaattaa aaaatcataa agccagaacc cttcagtttg taaaaagaag
      241 aactcaggat ctgctattga aacatggtgt taatcagtaa ctcctaatga tctgctccac
      301 agccttagag gttacgtgct tattcagcta cacatagcaa acaagataat gagggaaagt
      361 ggaagaagtg aagggaatat gttacagcaa atgcaggatt ttgctaccac cagacatatt
      421 cctaacccct catgtcgcag tttattttct tattttcttt ataaagtaaa gc
//
LOCUS       KCPA01001520             607 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 167103tic ultra-conserved element locus
            uce-4184, sequence.
ACCESSION   KCPA01001520
VERSION     KCPA01001520.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 607)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 607)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="167103tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>607
                     /note="ultra-conserved element locus uce-4184"
BASE COUNT          171 a          137 c           96 g          203 t
ORIGIN      
        1 taaaggaaca gcatggttaa atcaccctca actgaatggt tcttctccag acacccactg
       61 agacttttta gaaagaacca tcttcctaag ttaacatttt tctaatgttt tatcttttaa
      121 acaactggtg gacaccattt ggtttttacc cacaatataa aacccagtac cttaaattcc
      181 agttccattc ctgtgacatt ctcgcctgtt tctatttgtg tcagcttctg gatatatgca
      241 tacaggtttc tggctggcac ttcggtattt ccacatgtca ctgcttccag cagtgcatca
      301 tggataaaga tgtattggtc ctcagtttga accatgtaat tcctctgtgc tctcattaga
      361 gttacgtggc cataaatatc tacagtcttt tcatgcttta ttctctctaa catggcatct
      421 atcacaatga aacagccagt cctgccgact ccagcactaa aagaaatgaa cacgggagag
      481 aaattcattc actgtgctta cttttacatc attcaagttt taaagtttcg taatgctgat
      541 ttaaacagca catgtttctg aatatgagca tcagctttta tttggtaccc tgaaataagt
      601 aaactcc
//
LOCUS       KCPA01001521             525 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 167213tic ultra-conserved element locus
            uce-1257, sequence.
ACCESSION   KCPA01001521
VERSION     KCPA01001521.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 525)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 525)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="167213tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>525
                     /note="ultra-conserved element locus uce-1257"
BASE COUNT          143 a          125 c           92 g          165 t
ORIGIN      
        1 tgtctgcatt tggcacattt cccacagccc ccaggcactg tattccccaa accccccgag
       61 ccgtttgctg cagagacgcc tgtgttattg tcagattcaa gagttaaata ttccaggagg
      121 aatttgttcc tgcacggtga tacataatgc ctgaaaaccc cctgcaccaa tattgctctc
      181 aaattggcag caagtgaaca agggacatga aggatgcttc agcacagtaa cctatccttc
      241 cttctctcct gggagccact tggccagctt tcatcctcat aattataata aatttgacat
      301 ttcatagata atattgattt ctgtatttta gcatttcacc ataggtgaca gtctagcgtc
      361 aagaatgaaa tttctattga tctccagcgc attaatctct catgtgtatg tgatcatttt
      421 tataagacct tttactgcac ataaatcaat atttcatatt tccagctatg ccagaggaga
      481 tgtcatattt gtaaactgtg agttgacacc tgcaattcct tcctg
//
LOCUS       KCPA01001522             808 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 167326tic ultra-conserved element locus
            uce-5293, sequence.
ACCESSION   KCPA01001522
VERSION     KCPA01001522.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 808)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 808)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..808
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="167326tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>808
                     /note="ultra-conserved element locus uce-5293"
BASE COUNT          239 a          166 c          125 g          278 t
ORIGIN      
        1 ttttgctgtt gatttctttc ctgtgggttt gtctcactga gtttcctagc cagatcaaaa
       61 cactggttcc ttaagcactc caaactgctg agacacacct cttcatcact ctcctccact
      121 attttttctg taagtccatt gttcacaggc ttccctagca ttacaaagtt catattccta
      181 ttgtcttgct gtgaagtatt gtctgaataa tttctgtcat taatattttc tgaaagcact
      241 acaccatgtc cttgtgctaa taatttaagg gagtccactg tttccctaac aacatcactg
      301 tctaaatcta aactcagctc acttttccga ccgatatttt catttttgtc actatcatct
      361 tccagactat tagatgtatt gctgttcatt tctgattctg tcctggctct gtatgctgca
      421 tcctctgcaa ttttgccaag atttaacaat gacttggcca ccagttcatc gtaattatca
      481 tactcatcat tattgttatc gtctttttct gtgtcttgca ttattcgagt attgtgacaa
      541 ttcatttgat ggtcttctgc ataaaaaaca gaaacaaaga aagaaacaaa gaaagaaaga
      601 aaaaggaaaa gaaaagaaaa aagtggctac aattggaact gttgttgcaa ttgcacggac
      661 agaaaacaaa ctgcatgtca aatattgtta atcatacagc aattttagaa cactatggct
      721 gacccatttg aactgaaata gggctatttt tgttcatttg ctattcacag gaattttttt
      781 cacagaactg ataagaaaaa ggcaatca
//
LOCUS       KCPA01001523             401 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 167427tic ultra-conserved element locus
            uce-6826, sequence.
ACCESSION   KCPA01001523
VERSION     KCPA01001523.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 401)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 401)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="167427tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>401
                     /note="ultra-conserved element locus uce-6826"
BASE COUNT           81 a          107 c          114 g           99 t
ORIGIN      
        1 acttacctag gattttgctg atgttggagt tgtgcatgtc agggaaggcc tggaggattt
       61 tccggcgctc atccttggcc cagaccatga aggcgttcat cggccgcttg atgtggggct
      121 cgctgctggc gcggccccgc gagtcccggt agacccgggc ttcagccacc gtggcccctc
      181 ctgttggcca acaataatac tgctgtagtt tagcggcaga gccattcact gctttactcc
      241 ctgtaacgtc agggcaggag gaaacaagat ggatgcaaaa caacgtggat taggaaagcg
      301 ctttcagtgc tgtgcttatt ttagcctctt ctgcagatct atccaacccg tggtttcagt
      361 gtagcggcga ggcttgccca tctgagatga cccaacgtca a
//
LOCUS       KCPA01001524             595 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 167534tic ultra-conserved element locus
            uce-3917, sequence.
ACCESSION   KCPA01001524
VERSION     KCPA01001524.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 595)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 595)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="167534tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>595
                     /note="ultra-conserved element locus uce-3917"
BASE COUNT          182 a          134 c          125 g          154 t
ORIGIN      
        1 aaattgcaca cagccgattt aatgcaaacc agaagtcact gactgctgga tgaacattcg
       61 gtttcattcc cacatggata ttaagacaaa gcgggggagg gggcttcctc ctcatttatt
      121 tacagttaaa gggtgggtct tgaggaatga gcatgaggcc agtgaagaat ggattcggtt
      181 tatgggaaga cacctcccat tctgcagcca gcctgggttg tgtgtaacct cccccatctc
      241 gcatctgcct tgcccaatct cgtctgggcc cgctccaata acaacatctg cttggcagct
      301 tttcaaaccc atggatagtt atctaactga ggcttttgtg ctgcactgtt tattctatgt
      361 gaagaaatgc ctccttagtt gaaagagtac tttagaaaag ctgtgcagct attagcaagt
      421 gaagcacaag gctaataacc cccacctgct catcaaatta attatgacat ctgagtcatt
      481 ataactcaga aagaacacat gactgcagac ttgtcacacg tagaaataaa aacactctgt
      541 attagaggag ggaaataaaa gaataatcca ggaaaaaact aaccttccac aattc
//
LOCUS       KCPA01001525             528 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 167642tic ultra-conserved element locus
            uce-1937, sequence.
ACCESSION   KCPA01001525
VERSION     KCPA01001525.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 528)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 528)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="167642tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>528
                     /note="ultra-conserved element locus uce-1937"
BASE COUNT          155 a          100 c          103 g          170 t
ORIGIN      
        1 gaacactgga ttaggaacaa tattcaacaa aatgctgcct gcattctctt atggctttca
       61 ttaccaaatt gaaaatctgt gtagatttct gaaaattact tttaaatgta gccaatctcc
      121 tcgactgcaa ggcttgattt gctggtgagg gagtcctgct gtgagatttt aatgaaagat
      181 catagtgccc ctccaagacc gtcaaagagc tatgggccct aaaagacctg aaataatctg
      241 ttttactttt aatggcagcc attttatatt cattaagatc aaaatgcagt tttgcaggca
      301 aattgcaaag ctgttccact cacagcttga gaacctggag gccctacagc tttttatctt
      361 gttcataagc aaatatgcag ttaatatctt ttaatatgct ttgatgcttg gtaccttatg
      421 ggtacattgt actggaggtt agagaactgc atgtttcttt ggcagtgcta gcaacgaact
      481 aaagcaccag tccttttatt tccataatgg cagaagaaat gagtcttt
//
LOCUS       KCPA01001526             552 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 167744tic ultra-conserved element locus
            uce-7084, sequence.
ACCESSION   KCPA01001526
VERSION     KCPA01001526.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 552)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 552)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="167744tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>552
                     /note="ultra-conserved element locus uce-7084"
BASE COUNT          179 a          100 c          108 g          165 t
ORIGIN      
        1 aagaagaaac ctttcatacc acagagttac cttgcccctg gatttgtttg cagtgctttg
       61 cttaaggttt aattctattg attacacatt ccattttcca aagtgccatt tgcctgaagg
      121 agcaggtggt gtttgctgtt tccatttaac tgatatatta gccatgtggt gcactgcatc
      181 agtgggcagt attaatcaat ttacggcaag atgacagaga gaatcactca cagcaaaatt
      241 gcaaaaaaaa aggacaaaag caggaaaata atgaccatta atggggaact tgaaaacaga
      301 atccgggctt ttaatacttc tttcataaca aatggaattg gaaaaattca ggagcagcca
      361 gtttgaaagg agacaaatat cactatgttc agtgcagttt ttgtaagcac tttgctgttt
      421 ggcattgtgt gatgaataca gagtcacaga cctcatactt gctgagaaac ttagatttcc
      481 ctgccttaaa taaaagcaaa atgcatcata cagctagtac atctcttttc ttggaagatc
      541 cattaagttt ct
//
LOCUS       KCPA01001527             629 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 167850tic ultra-conserved element locus
            uce-6177, sequence.
ACCESSION   KCPA01001527
VERSION     KCPA01001527.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 629)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 629)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..629
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="167850tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>629
                     /note="ultra-conserved element locus uce-6177"
BASE COUNT          185 a          108 c          128 g          208 t
ORIGIN      
        1 tgcttatctt cttgaaggac atgggatttt gtaaaagttc acaacaaaaa tgagttgtcc
       61 accaagcaga tgtttatttt aatccagaaa agtttcttta gtccactgtt gggaacaaaa
      121 ccactccaaa gtgattatgc caccttattg cttagatatc ctcatgtatt tcttgttatt
      181 ctagttgagt actacattca gacagaggtt gccaataaag tttattgtag gagctaagtg
      241 tcaatatctg tagtaccccc tgcctagggt gcttgtaatt aaaatgccac agatagtctg
      301 ggagaagcat gaaaatttga tggcaaattg atttcaggtt catcttgaaa tttgtcctca
      361 gctggactca atactgctgg cagacattgg atggcttttg tcaaaagggt ttgctgggat
      421 gagacagaga tgccttgatc tgaatattaa atacagtgct ctgcttatga cagtttgctt
      481 actgctaaca tgtttgtgtg gggaatgttt tgggtggcag tactatattt tacttaggaa
      541 aatatattgc tttttggcac actaaagagc tgacattatt aacttcaaac ctaaacatac
      601 agcctcaaaa cttctgaatt ctgcagata
//
LOCUS       KCPA01001528             667 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 167961tic ultra-conserved element locus
            uce-6550, sequence.
ACCESSION   KCPA01001528
VERSION     KCPA01001528.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 667)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 667)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..667
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="167961tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>667
                     /note="ultra-conserved element locus uce-6550"
BASE COUNT          210 a          127 c          128 g          202 t
ORIGIN      
        1 ccatgaatag ctcagctgtt aacaatcccc aagaaaataa tcaggcttca tgccaagcga
       61 gttttctcaa agtgaataat attttgaaag cctgttcaaa acatagctgt gacataataa
      121 gtttataaag agtgcaagtg actccgaaga gatgccagtc tgagtctgaa agaagaccca
      181 gtttataacc cagtaaagaa gaaagcattt tactctagtg caattctcaa gccagtcctg
      241 cacgcacatc tgtttccagt gtgatgctgg tatgcaaact attgtctgtt ggaagtgtgt
      301 tgtggtaacg tttgccaggg ttaaagactg ggtcaatttg atcaagaagc taaaattagc
      361 ttctgtgtgt tttcctgaaa agtactgtaa agctctttgt tttccttcag gtcttgttct
      421 cagatttctg ttcggctgtg tgaactacca taaagcagac agttccaaaa cctactgctt
      481 ttttacttgt tcttttgcaa taactgcagc agccattagg ttctgcagaa ctgaacagtc
      541 tgattctgta tttcattcat cacaagagtt taaaattcaa taaggcactc aaaatcccta
      601 caagagtaag acagatgaaa aagttttggc tgctgaaact aaaacaaaca gaataatttt
      661 agctact
//
LOCUS       KCPA01001529             496 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 168071tic ultra-conserved element locus
            uce-3698, sequence.
ACCESSION   KCPA01001529
VERSION     KCPA01001529.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 496)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 496)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="168071tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>496
                     /note="ultra-conserved element locus uce-3698"
BASE COUNT           77 a          113 c          111 g          195 t
ORIGIN      
        1 ttggaatcgg tctcctgggg agggagtttc tgaacagagg cagtagacac tgaggcaagg
       61 taaccagtgt gtcactaggc tgtggaaggg aaatccaggc ctctgcttcc atttggtttc
      121 tggcagtttg atgtttactt ggtgtccttc atgtactttg acttttactt gtccatcgtt
      181 ggcatgtgct gcccttccct gtcaactccc ttccccagga gatctcattg tacagtgccc
      241 attcttgttc tttctctccg tgtttggatg tactgctctg tgtaactcag tgggtctccc
      301 tctttctggt ttgttttttt ttctagattc ctgccgtttg ttcatcgttg tgcctaaagc
      361 atgtcgatgt ggcgttcaag tacatcgtcc aaatccttgt ctcttcagct tctctgatgc
      421 ttgaactctc acctttgacc ttgtgttgac ctttgatgct gatgtgtatt tttattatgt
      481 ttgtttcttt tctttt
//
LOCUS       KCPA01001530             470 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 168178tic ultra-conserved element locus
            uce-2417, sequence.
ACCESSION   KCPA01001530
VERSION     KCPA01001530.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 470)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 470)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="168178tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>470
                     /note="ultra-conserved element locus uce-2417"
BASE COUNT          138 a          102 c          106 g          124 t
ORIGIN      
        1 tggcaaataa taagcattaa tgccttgtgt gcttggatgg gtgtattgag gggggagatt
       61 tgtaaatatt gcccgcaaat cattcagcgc tgctttcaca gtgcagtact aaagacagac
      121 taaattagca gtccacttcc cccgctctcc ttcccactca agtcatgtct gtttaccctc
      181 agtaatgaca aaacgtagac aactgtctgc tatggctgtg gtgacattgg cacacacata
      241 ccagacaagc agaatgttgt gggaaacaga gattgaagca tcttgatata cgagaaacaa
      301 ttatcatggg aattgttgtt tctcaatgca acagctataa taaatagttg ccatatgcta
      361 agcacagatg cctccttgaa aagcagccct gtgatggcac agcccatgtt cctcagagtc
      421 tggggctttg atgaaatgac ggtatctcaa gccatcgaag accttagagg
//
LOCUS       KCPA01001531             579 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 168287tic ultra-conserved element locus
            uce-2538, sequence.
ACCESSION   KCPA01001531
VERSION     KCPA01001531.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 579)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 579)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="168287tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>579
                     /note="ultra-conserved element locus uce-2538"
BASE COUNT          117 a          156 c          157 g          149 t
ORIGIN      
        1 accgctgcca acgtacaccg aaactcccta aaagcaatga caggcttaca attccagcct
       61 tccctcttct gaggcatcga acactattat catcacttgc ctgttgcagt cccactgtcg
      121 ctctgcagca gtgctcctgt cactggttgt gcgttgtttg ggtttgctcc tggtgctgcc
      181 ggggagggag gccctgctcc acccccaagg agcatgcagg agggcggagg gggctgccca
      241 cgtttcagta acactttgtg gtcctgctgg cagcggaatc gcggcggcac ctcccgaggc
      301 atgtagcggg cggcgctcgg cggctgtccg ttcggcactg ccaccctttt ggcattgttg
      361 ccaccattga ctggtggcga tggagagttg ccaattgggc tggcagccac tggttggctt
      421 aaacttggtt tcgtcacttc gggcactgaa aagaaaatca ggagaaacct gcgttagcta
      481 gactctttgc tttcgttatt taatctctga aatattgtgc agcttccaaa acaattagaa
      541 gcaggaataa gcagttttgt ttccaactct gtagtctag
//
LOCUS       KCPA01001532             525 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 168398tic ultra-conserved element locus
            uce-4334, sequence.
ACCESSION   KCPA01001532
VERSION     KCPA01001532.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 525)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 525)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="168398tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>525
                     /note="ultra-conserved element locus uce-4334"
BASE COUNT          149 a          109 c          107 g          160 t
ORIGIN      
        1 gtgcaaaatt gtcctttggc gcaaacccag aaatacacat ctttgcatga tgcacctgga
       61 catatgtggc aggtctggta gaatcagcta attaacaaca caggcttaaa caggcacctc
      121 atctggcagt gtagttagtt gcctgatggt gctcagcagg atttggtagt gctttttatt
      181 tttctatcct aatggtctgc tgcccaccta attttgcctt attgtcagcc actacttacc
      241 gcagcttgag gccctcccag gaggctaaat tattatcaaa ggattaggga gatgtagcct
      301 tgcagctctg acatttctga ttacttgtct atgccagaac agtaattagc tgtgactaat
      361 taagaaaaat gttcctgcca tagaaaacca tttaaaagaa ctgagaagta gaaaagcaat
      421 tgaaaagctg agcagtgctc agatttgctg atgctcttta gattttcacc aaagtcttaa
      481 ctcgtcttta attacgtgtc ttattcgtga tatgaaacca ctctg
//
LOCUS       KCPA01001533             423 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 168501tic ultra-conserved element locus
            uce-6811, sequence.
ACCESSION   KCPA01001533
VERSION     KCPA01001533.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 423)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 423)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="168501tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>423
                     /note="ultra-conserved element locus uce-6811"
BASE COUNT          120 a           91 c           83 g          129 t
ORIGIN      
        1 ctgttacaga aaagatctgt atttaagcca taacactgca ctgggatctc ccaggcagga
       61 tattaatgct aattcatctg ctcaccccct gctgtgagtg ttatttgttt aaatctgtag
      121 aatcccacag cgcatttata tcctcgctag agtgagctcc gctccctgta attatttaac
      181 attatatgct gatataaatt gtaacagtta aagaatggta atgagtagca acacaaactt
      241 aaccttagaa atggcagagt cagctcttaa aacaacagcc agcaactttc actgttccct
      301 gtcttttccc aagtccatat gcacaatatt gtgcatacat tatgtgtgtg cgtgtgtgtt
      361 catgctcgta ctggcagcgg tgccaggcag ggctgtaatt atgcagaatg tactgtgaaa
      421 ctt
//
LOCUS       KCPA01001534             732 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 168613tic ultra-conserved element locus
            uce-1366, sequence.
ACCESSION   KCPA01001534
VERSION     KCPA01001534.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 732)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 732)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="168613tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>732
                     /note="ultra-conserved element locus uce-1366"
BASE COUNT          242 a          150 c          135 g          205 t
ORIGIN      
        1 aaaaatacac cataaatttg taaaataaag aggaccatgc ctatgaatta ccatgctctc
       61 cttttgctgt taaatagaga attaattccc agagctgcct ttctccccgt gggacctggc
      121 ccagcacggg ttcacccacc agtgtgcatt ttctggagga agctgttgct tttgctacag
      181 taattgttac aagcaaagca ccaggaattt tgagataaca tattgtttct ccataacagc
      241 ttcaaacttt tacccagatg cttggttttc ttctgcttta tagcagaaca aactccccat
      301 ttttcataag acctgatgta tattgtgctt ttgactagtc cataactcag actaaagcat
      361 acaggcactt ttctacactc tgttttctca tgaaagagag aaccttgcaa gctgcagcac
      421 cagagcgaga aagaggtaga gacaatttat gattcagtga cataggcaga aggtgtgatt
      481 tatagtttaa tttgctgtcg taatggacag aggataataa catgtaaaat attaatcaat
      541 gtgtagcaac agcagacatc atttgctaag cttgttatct gctgctctac ccctgacagt
      601 gaacaattaa actgacacca gaaaaacaag agaaaatgca tgaggcaatg ccagggcaaa
      661 aaaagcagaa gcatcccaag gccactgaaa attaacaaat aaagacaccg agctattttt
      721 ataatttatc tt
//
LOCUS       KCPA01001535             723 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 168721tic ultra-conserved element locus
            uce-3065, sequence.
ACCESSION   KCPA01001535
VERSION     KCPA01001535.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 723)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 723)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..723
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="168721tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>723
                     /note="ultra-conserved element locus uce-3065"
BASE COUNT          217 a          138 c          159 g          209 t
ORIGIN      
        1 ttagattatc tgctctagat ttggaattgg gattccagtt atgaaagctt atctgtggca
       61 acttaataaa aagatttagt catctacatt taatttacta catgaacttt gacttccata
      121 ctaaataaag agatggtgct tcaagagttt tcctggctca tttctttaca agtatggagt
      181 gcttgcagtt tcttctcctc tttgtgtttt gctgtccact aaatatacgt tggtggaaac
      241 tgctgtcact aaaaacatct tacctattgc acccaaagta taatgctttt tgaggttgct
      301 gctcccatca atctgctcag taaaagtagc tcatcttggt aagttgtttc gacttcacca
      361 ggacctgaag aagaggcaga aaaacctgtg aaaactaaga ctgtttcttc cagtaatgga
      421 ggagaaagtt cgagtcgcag cgcagagaaa cgggcggcta atgaagaagc tgaagacttc
      481 accacaaagc ctgctcctgc caaaatgtcc aagtttggat tttccatagg cagtcagaca
      541 acaaagaagg catctgcaat atccatcaaa ctgggagcaa atgtaagttt aacgtaattt
      601 tagggaaacg aaaagggaag tactttcggg aggcttcctt gcagaaggaa gccttgaatt
      661 cccatgaggg ttgggtaaag tttaattgca gggccagcta cacttcaagg tgcaggtcag
      721 tag
//
LOCUS       KCPA01001536             648 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 168830tic ultra-conserved element locus
            uce-5597, sequence.
ACCESSION   KCPA01001536
VERSION     KCPA01001536.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 648)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 648)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..648
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="168830tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>648
                     /note="ultra-conserved element locus uce-5597"
BASE COUNT          174 a           99 c          140 g          235 t
ORIGIN      
        1 tcagcacagg atgcatgtta gagcacttag gtttgggtag ttcttttaat agcctgaacc
       61 aagtgaatcc tagtggggca cgttgttagt tgttggtttt tttttttcct tgagcagtgt
      121 ttttggttat tgatttaggg aaataattac tgaagggttt tctacagaga attttttttt
      181 tttttattgc aagattaatg ccttggtttt aataaaatat tgtatgagac acaacctatg
      241 atgaaaatga ctatttctta ctgtatttat ccaacatctg cattttcccc tttaaagctg
      301 cggtctcctg tttgctaaaa gaatattggc cagtattgca gattttaact gatttggctg
      361 atcctccagg gaccagtttc tgtgggcgtg tgttggagca ggtttgtctt acactgttaa
      421 agatacacta tccttttaga acggaagatc ggttcagtgg ccgttatact gtaactgtcc
      481 tagaaaaaaa accacggttt ttcctcaagt gaagaggcat cacaccgggt ggggaaagga
      541 tagtgtgtct ttaacccttc aaactgtttt ttaaaaggat gagctagctc tggagttaga
      601 taattgtagc aaatttagta atatattcta agtctttaaa gaagtatt
//
LOCUS       KCPA01001537             533 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 168932tic ultra-conserved element locus
            uce-7797, sequence.
ACCESSION   KCPA01001537
VERSION     KCPA01001537.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 533)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 533)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..533
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="168932tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>533
                     /note="ultra-conserved element locus uce-7797"
BASE COUNT          164 a           86 c           90 g          193 t
ORIGIN      
        1 tatatgcgac tttgtttaat agcttataaa tgttcagtag atagctttca tacaacttgc
       61 cccatataca tttttccact ttacgcttga tttttcaatt gtatcaaatt tatgtctact
      121 gtaaactttg cttaacctct attaaattga atattgcaat ctatatagtg taacgtatgg
      181 cttctttcat cagactgatc ttctatgtta ccaatgtgga ttatcacctt ttccctaaag
      241 tgtacttaat ctttgctttc tttgcacaat gtctttggtt gcaagtcata agcctgaggc
      301 aaataaaatc ccagtaattt tgaagaatgt ggtgttggtg aatgaagaga attcaataga
      361 ttgttacgag ttccactttt tgtagtagca gcgagtgggc aggagtgtct cctgtagaga
      421 ggtccacata taaaattcaa atatcataga agtatcttct gagatggaag aataataaaa
      481 ttgagtagac tgataccttg aatagaagca taattcatta cttaattaca act
//
LOCUS       KCPA01001538             714 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 169041tic ultra-conserved element locus
            uce-888, sequence.
ACCESSION   KCPA01001538
VERSION     KCPA01001538.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 714)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 714)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..714
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="169041tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>714
                     /note="ultra-conserved element locus uce-888"
BASE COUNT          195 a          161 c          145 g          213 t
ORIGIN      
        1 ctgtttttca gagaatttag ttggttttac agtctaaatc ttcccacatt tgaaggtctt
       61 gtatgtaggc aaaggagtgt gtatgaggtt attctagctg caagaaagag gaaatggtat
      121 ttaaaaaacc catttaatta aatgacagca cttgggattt catttaattc acattacagg
      181 aggaatttag acttccactg ctaccacctg ctgccaggct gagctgcgag cgttgttcct
      241 gcgtctcacc aatgcaggtg aacttactgc cgaaccactt tcacagtcca gaaagcatga
      301 cattccttgt taccagtggg aggaaaggct aattgagaag tgtgtataaa agctgtaatg
      361 agtagcattt acatgtattg attagaagta gggccacagt ctctcattta tcaccagcag
      421 cagctgtgaa attttcccca cgtcgattgg cacggctcat attcccgctc ctctggttct
      481 ttattgcttt tttcctcccc acccgccctg aaccagagtg ctgatccacc agctggaatg
      541 ggctggtaat tactccagct tctccaccag ctgccacaat tgccaaaccg ctggagtgaa
      601 aaattccatc ctgcatttcc gattttttac attaccactg cataatcata tttgacgaat
      661 aattaaccca ggttaatact tcagggagcc atttgcaagt aaattgataa gttg
//
LOCUS       KCPA01001539             330 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 169153tic ultra-conserved element locus
            uce-29, sequence.
ACCESSION   KCPA01001539
VERSION     KCPA01001539.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 330)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 330)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="169153tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>330
                     /note="ultra-conserved element locus uce-29"
BASE COUNT           89 a           82 c           83 g           76 t
ORIGIN      
        1 ctccttatca ggctctcggc agcatttgtg attcatagca gtcatcaaag tgataataaa
       61 ctcattcaca atactaacaa acatggggct cccagttatt tacgaggcaa attcacagcg
      121 atgccgggca gtggaacagg ggagaatcaa gatggtgttg attgataaat tgacaggtta
      181 atttacaagt ggataatagg agttagaccc agagggagcg ccagcagccc cggctctagc
      241 ttggttgcac tgccatctgt cttgtgcctg ggaatctgcc cggtcacctc cccgccgggc
      301 aggtgacctg cacctacaga aatgccacca
//
LOCUS       KCPA01001540             404 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 169256tic ultra-conserved element locus
            uce-575, sequence.
ACCESSION   KCPA01001540
VERSION     KCPA01001540.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 404)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 404)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="169256tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>404
                     /note="ultra-conserved element locus uce-575"
BASE COUNT          120 a           74 c           75 g          135 t
ORIGIN      
        1 catgaaccag agcgcctggg cttgaacggc atcgcagaga ccacagtggc catggaagtg
       61 acataaccgg tgtctcctct gctccagctg aacgcgaaca cagcgctctg tggatattat
      121 atcgtgtatt aagtcgatat atgaaaatca ctaccttgta aaatagttta tttgtatcat
      181 caatattatt tctgttactt gaatagtaga tattcatcat catgcttttg cacttgaatt
      241 tgcaactgaa tggataattc tttaatggga tcatgagcat gacatgggat cctgcatcac
      301 ttgtttaaac tatttatttt gccatgttta cattttgtat cttgtacaaa taaatgcaac
      361 tttgtgtcta aagattcata gctaggaaac aaaattcttg taat
//
LOCUS       KCPA01001541             565 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 169366tic ultra-conserved element locus
            uce-7996, sequence.
ACCESSION   KCPA01001541
VERSION     KCPA01001541.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 565)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 565)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..565
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="169366tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>565
                     /note="ultra-conserved element locus uce-7996"
BASE COUNT          146 a          143 c          128 g          148 t
ORIGIN      
        1 ttttttttta atgctgtagt agcagaagcc catagtgttg ttgagagctt tgtccttatt
       61 tcacagatgc actgggaatt gtttttaatc tcctttctgc tttcccatta cagatggtga
      121 tgacgaccca caactctcct gggtggcttc atctccctcc agcaaagatg ttgcatcacc
      181 cactcagatg ataggagatg ggtgtgatct cggcatcggg gaggaggaag gggggactgg
      241 cctgccatat ccctgtcagt tttgtgataa gtccttcatt cgcctgagct accttaaaag
      301 gcacgagcag atccacagtg acaaactacc tttcaaatgc acctactgta gccggctttt
      361 taagcacaag aggagtaggg atcgccacat aaagcttcac acaggggata aaaagtacca
      421 ttgccacgaa tgcgaggctg cattctcccg cagcgaccac ctcaagatcc acctgaaaac
      481 ccacagctcc agcaaaccat tcaagtgtac tgtgtgtaaa cgtgggtttt catctaccag
      541 ctcattgcag agtcacatgc aagct
//
LOCUS       KCPA01001542             624 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 169477tic ultra-conserved element locus
            uce-5024, sequence.
ACCESSION   KCPA01001542
VERSION     KCPA01001542.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 624)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 624)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="169477tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>624
                     /note="ultra-conserved element locus uce-5024"
BASE COUNT          170 a          137 c          119 g          198 t
ORIGIN      
        1 cccaggagtc ctcttctgct atctgattgc agtctaattt ccattgtatt cagtctgcta
       61 tagaaatact taatgtcagg aaggagatat ttactggaat acacaagtcc agaattcatc
      121 atgattcagt gtgaaatccg ctcacccttt gctccccacc ccctcttgaa ttggaatgaa
      181 atgtgcctta aactgaagtg aaatacatca catgcagcaa cagtgggccc tcgcttcgcc
      241 tctattcctg gtgtgaaatc gatacactat ctttcctcct gacctgttct gtgacctcca
      301 ttgcagcttt catgctgaac agcaattgct ttgaacagtc tgggtctgcc acagctcaca
      361 aatgattctc agcttctgtc taaaactggt gctgataaca aaggcttgat tttaaataat
      421 gcagttgtag tcatcttcta attatgaatt acatgaaagt gcgtggtctt ctattattca
      481 atagcatgtg cagtatgttt gcagccagaa taactcctca ctgagcagac aaggagttct
      541 gttcctgaat ctgataaagt ttgttgttac tgaagaggag aaatgtggca aatagttcag
      601 aacacgtttt ctttatcatt gact
//
LOCUS       KCPA01001543             588 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 169588tic ultra-conserved element locus
            uce-171, sequence.
ACCESSION   KCPA01001543
VERSION     KCPA01001543.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 588)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 588)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..588
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="169588tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>588
                     /note="ultra-conserved element locus uce-171"
BASE COUNT          185 a          145 c          131 g          127 t
ORIGIN      
        1 ctctgcccgt cccacgccgg agatgctcta ctcagagcct acacttttgc gtggggaaaa
       61 gccattcttc cagggcatta atattactac ggagacgtct tcataattac agcagatctc
      121 aaagtggcac aaccaagacc agcaccaaag ctaaaataac tcgcaggagc aggcgagctg
      181 cttttgcagc cctcagtccc agaaatgctc ggtagctttt cttaaaatag acagcctgta
      241 aataaggtct gtgaactcaa ttgaaggtgg ctgtttctga attagtcagc cctcacaagg
      301 ctctcggcct acatgctagt acataaattg tccactttac caccagacaa gaaagattag
      361 agtaataaac acggggcatt agctcagcta gagaaacaca ccagccgtta cgcacacgcg
      421 ggattgccaa gaactgttaa ccccactctc cagaaacgca cacaaaaaaa caagttaaag
      481 ccatgacatc atgggaacga gatggagaga gggaaggagg gagagagggc acccgtggat
      541 aaagcgcaaa caattttcag gttcattttg atttctctgt gcctaata
//
LOCUS       KCPA01001544             686 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 169697tic ultra-conserved element locus
            uce-7586, sequence.
ACCESSION   KCPA01001544
VERSION     KCPA01001544.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 686)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 686)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..686
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="169697tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>686
                     /note="ultra-conserved element locus uce-7586"
BASE COUNT          233 a          126 c          169 g          158 t
ORIGIN      
        1 acagattgaa agaaaaacat ttcaccttgt aagggacaag actctaagtg agtgagggat
       61 gacatgggtt aaaattcacc ttgcttctca ctcctaaccc acgatgggat tttggagaac
      121 gacggacatc tggaaatcgg ttttacagag aaaaatagaa aacagggaag aactaggaag
      181 atgaataaag gctcatcaca gacacaaaag accagaggaa aaagaagctt ggatttgggt
      241 attcttgtct ggcaaggagg caggcagtaa ggctaatgaa gcatttgcga tatgggacgt
      301 atgccagcgt aacaaagaag atgtgcatca gctctgcaga tgtgccaaag cccccagagc
      361 aaaataatga cataatcacc atcagtgtca cagaccagac tgtacacaag gtgacatggg
      421 agagaataaa taagggtctt tagaggcctg tagtacacac acgggaagga atagccattc
      481 ctcacaactg ccacaagaga gtggcgagat gttgggtata atgtgtgcag ctagcaaaag
      541 aaatcttgaa ttgtgcaagg ctaacacact ataaattggt gcttttctcg atctccagtt
      601 gacgtttcaa ttcccagtac cccttgttga atgcaaaatg aaatggcact aggagtcaga
      661 agagtttgcc aagttttgtt ttgttt
//
LOCUS       KCPA01001545             663 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 169802tic ultra-conserved element locus
            uce-3696, sequence.
ACCESSION   KCPA01001545
VERSION     KCPA01001545.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 663)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 663)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..663
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="169802tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>663
                     /note="ultra-conserved element locus uce-3696"
BASE COUNT          200 a          126 c          120 g          217 t
ORIGIN      
        1 tatattatga tgtttgatga aattccctat cagaaaattc cttgaaaacc tctgaacaat
       61 taaactttgt cgaacggatt agtttgctaa agatctgatc attaagagtt tagattgttt
      121 ctctgttaaa tcagatatgc ctcctacaat ttttacaata cttcctttat aaattaattg
      181 ttctgtggtt attaaagaat ctcccccaaa aagcaaaatc tcagtagatg cggattttac
      241 actgcactag atcaatccca ataccagtaa atggatatta ttaaacagca tggggtagtg
      301 caaactggga aagaaaactt gtagtgtgct gcctttgagc agacctggct tgcatgctgt
      361 gacagggcaa ttgtcgacat gctttttcat gccaatctgc agctttttca actctagatg
      421 ctatggcaac cagggtttaa cagactaagc agctaacaag cttccctgat ggaattgtct
      481 ggttgtatga ttgccttgtc ttagtgaaaa tataaaatag accaaagaca cttgtggaca
      541 tttgtcaaac tgattataat ttggacactc agctcataat tatctgttat atattgcata
      601 gtattgaccg tcggcatttt ccatgctgtc tgtagagaac ccaagtgcct ttctgtacac
      661 cct
//
LOCUS       KCPA01001546             434 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 169911tic ultra-conserved element locus
            uce-6716, sequence.
ACCESSION   KCPA01001546
VERSION     KCPA01001546.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 434)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 434)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="169911tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>434
                     /note="ultra-conserved element locus uce-6716"
BASE COUNT          153 a           80 c           72 g          129 t
ORIGIN      
        1 aatgcgtttt ccactgtcca gcagctagtt aagaagatta atgactgctt tgtagttcca
       61 attaaaatcc tttatcacca agaggaacca aacaagtttt gatttcaaaa gtgctgctta
      121 agaaagaaga ccagggctgc ataacactga cattttatta gaattcatct gtaacaaatg
      181 gaacttgtgt cagcaaagaa ctgattttca tacagacttt cttttgccac caatgtaacg
      241 aagtaagaaa ataaaaagca cgcctttcat tctgtaaaac atttacgcgt actactaatt
      301 agaggtaatt gtaattttac aaggtttttt ttaagttttt cagtctatgc atccaaaaca
      361 agagcaaaga acaccaagct tgaaaaagcc acataacgga tggttataat gagacctgca
      421 gccttctgat atct
//
LOCUS       KCPA01001547             729 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 170022tic ultra-conserved element locus
            uce-418, sequence.
ACCESSION   KCPA01001547
VERSION     KCPA01001547.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 729)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 729)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..729
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="170022tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>729
                     /note="ultra-conserved element locus uce-418"
BASE COUNT          239 a          141 c          124 g          225 t
ORIGIN      
        1 ttttaaaagg gagtcataac tgatggatta caacatgttt ctaccttttc aatctgaatt
       61 tcataagaat aaaataaacc acaaatgaaa gtgcttgtac caggcacgtt gaacctttct
      121 tcttctatta gcatatcagt ctgcaatcat aactagatca atagcaaaga tatctgctta
      181 aaagagcacc atgctttctt ttgtcagaaa ttcattactt tttattaggg tcattgcttg
      241 aaaacttcaa aacaccatat ggacctaatt gtggtttatt ttggcaaaaa ggaagacact
      301 gtagaacaat tgaggcatta cattctacaa ttccattact ttcatccctc tccgttttat
      361 tactgtgtca ttaaaggcaa cttgagtgag cgaagaatta tagtgtcatg tgtatgggct
      421 agtagattaa taacaaaaca cactcaagtt taaaggtatc taacagctgt tttcattatt
      481 ttgtgtaaat acgcttgaag catatctatc tgattagtgg atagagtgct cttctctgtc
      541 acatgccatg ggcactgcta tgtgcaagta atcaaagcgc tcagaaaatg agtttacatt
      601 gttcactgct gaaatacaca aatgtcagaa agtgactgcg catcaaagct caggcaaatc
      661 agctgctgca aacaaacaga ctccaatgca catcgcagct ttaaacattc ctctgcagca
      721 caatgactg
//
LOCUS       KCPA01001548             832 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 170124tic ultra-conserved element locus
            uce-188, sequence.
ACCESSION   KCPA01001548
VERSION     KCPA01001548.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 832)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 832)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..832
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="170124tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>832
                     /note="ultra-conserved element locus uce-188"
BASE COUNT          276 a          168 c          143 g          245 t
ORIGIN      
        1 attctgatgt cacagagatt taattaagaa agcccagata aacttcacag aaaacaatgg
       61 ttaactgtga ttctttgcca atcattatat tttaaccctc aaaaatctta atagtgattt
      121 cttgaatgta aaatgaatgg ctaggctttg ttgcaggtaa tagtgctaag ttatgaatgc
      181 tgatggcctt cttgtacagc cttaaattac attgaaaaag atacagtttc tttaattaaa
      241 aaagctgcac tgaactaatc cctctcgctg aaaaaggaaa agttttaagc aatctctttc
      301 tgctctggga gagaaaagca gacaatacca taacagatca gaaacataag ctatagtgtg
      361 cagccaggag cacagcaggg aactgaatac tgctccgact gtgtcatttt ttaatccccc
      421 atcccagttt tccccgtctg acctcatgct gagatgaagt tatcacagaa gacagcttta
      481 ctcttaccaa tgaatccaac cctggatctg tattatcctc agcagatcaa aacaccgctt
      541 tcatcaaata gcattatctg cataaaaggc atgcaattgc ctgataattt caaccaaact
      601 atgctattca tttaaaggac aagaagagaa atgtaattca ttcttttttt ttcccctgga
      661 aaagctaact tatacttcac tcatgggaac ttttcaacat gagatctcaa gaagaggtcc
      721 attaaaagtt tccctctggt ttacaattaa tcgttagagt acccctgtgc catgtgagtg
      781 acacaagtgt agttatgcag aaaactggca gggagaattc acaaagcttt ct
//
LOCUS       KCPA01001549             575 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 170233tic ultra-conserved element locus
            uce-1485, sequence.
ACCESSION   KCPA01001549
VERSION     KCPA01001549.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 575)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 575)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="170233tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>575
                     /note="ultra-conserved element locus uce-1485"
BASE COUNT          177 a           92 c          127 g          179 t
ORIGIN      
        1 agagtgtttt agtcatttta ctgttgttag gatggcaaat tgtggttata tattttaggt
       61 gtttgcaaga aattattccg aaggcttcaa gtttcctgcc atttccaaga cagccagcaa
      121 ctagtattct acaagagctt tgcatgggta tttctgttcc cgttgagggt gggggaggaa
      181 agggaatgta tgtgcgtatg tgtgtgaagg tatatagata cctccttcgt agtaatgttg
      241 tgaggaatcc tcataaggcc tatcgtagcc ttgttcagga tacgacggtt gctgataacc
      301 gtaatcatta tgacctacat caattcgaca agagacagga agaaacgtta atggcctctg
      361 agtgaaaacc ctaaaaatat ttcatttctc agaaaaatgt ttcaactgga tatacatgaa
      421 aaagaatttt caattgtatt agccaaagac ttattaagat gatttccttt catattgaat
      481 taacatgtga cacaaaaaaa aggcttaatg cagtagttct agaaacatca cagcaaggga
      541 tggtcttaac cttccgataa tccttgttgg gggag
//
LOCUS       KCPA01001550             646 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 170342tic ultra-conserved element locus
            uce-5136, sequence.
ACCESSION   KCPA01001550
VERSION     KCPA01001550.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 646)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 646)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..646
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="170342tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>646
                     /note="ultra-conserved element locus uce-5136"
BASE COUNT          179 a          146 c          163 g          158 t
ORIGIN      
        1 ggagaagcag taatttgttt gccattgccc tcaagccagg aaatccaaac ctcaagcatt
       61 tcccaggcca cagcacagtg gagcggagag agagtgtcag ggaatggctc acacatcccg
      121 acaggagcgc acgcacagag acggcgccgg ggttgttcca gcaccactgc ggttaagatg
      181 ctgagacaat ctcgagtttt caggccatag ctgtcaggat gctttggtat attcatcacc
      241 ccccactaca tggtgataaa aatttatgca gccaacgaaa cgaagattaa tttcatgtga
      301 aaagctgaca gaatggccca tgtcattgct ttatttgtgc cagcactcag taactcggcg
      361 caagttccat tgaggtggca gacaccccgt ccccttgagc catctcatct cctctctaat
      421 gatgccacca ttttgacaaa accaagcaac gcagccggta tgtgcgaatt tggaattaat
      481 tttcttcaga aaggtcaagt atgttaatga gcttttggct ggctgtatct tctttcttgg
      541 gtccctgtta atgggggaag aaaaagggag aaataatgaa ggaaggagca aaagaaggaa
      601 gcaagaggtg ggattctttc tgagttcttc ttttccaggg ctgagg
//
LOCUS       KCPA01001551             663 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 170451tic ultra-conserved element locus
            uce-538, sequence.
ACCESSION   KCPA01001551
VERSION     KCPA01001551.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 663)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 663)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..663
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="170451tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>663
                     /note="ultra-conserved element locus uce-538"
BASE COUNT          198 a          148 c          111 g          206 t
ORIGIN      
        1 aaaaagaaaa gtttgcaaag agcatgttaa acatggatta tccctcaaac ttcttaacac
       61 aaatttctca agattttaac atatggacag gatttttgca agcttaaaga cagaaaacag
      121 tacaagttcc ttaaacatca atgggttcaa aaaagttgtt aaacttactt tatttttgtt
      181 tccaaaactt atatgtttct cctcccttgt gtgctgaact gtgcactaaa gctgtgtctt
      241 tgaaaggtag ttcccatgat atgacatcca gcgcctttga ctgcctagag ataagcacct
      301 gcgtttgtgt cccctcttta cgtcacacct ccctattcaa accttctcaa tatgattcac
      361 atttgcacat caacagcctc atgcgcatac acagattttt ttcggctctg ggcccaaaac
      421 tttcacttta attttcatca catgattgct gtggcatatg tccttccaaa cctcccatat
      481 atcagtcatc atgcaaatga gatggaatat cactcctctg cagcagatgg ccagggatga
      541 taacaatggc tcaacagagg agattcaatg tccctgactt tatcgccacg gcaacaacaa
      601 cctaaaatat atgtaatgga agtggtgctt attaattttg caggctcgag tgttctgatt
      661 ttg
//
LOCUS       KCPA01001552             681 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 170559tic ultra-conserved element locus
            uce-6574, sequence.
ACCESSION   KCPA01001552
VERSION     KCPA01001552.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 681)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 681)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="170559tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>681
                     /note="ultra-conserved element locus uce-6574"
BASE COUNT          219 a          130 c          139 g          193 t
ORIGIN      
        1 aggagaactg gctccaaagc agttagaatg acactattca ttacactatc tagattcaag
       61 tttcagacaa ccataaccag tgctttcaca acctctcacc taaagtcaga taatgtagag
      121 ccacccaaat aagtgactga attgccccgc aagtgcttct gaacctctca aaatgtggag
      181 cctgtggagg ccctgaaaac tgagactaaa attgttatga agagacttta ttggatgaaa
      241 tttttccttg ccaggcacaa ataaacagct ctcaataggg tgctcaccac acagtgtgtc
      301 agcacatatt atgcagtctg gtgctgagtg gatgtgtcag ctgcccatta gaccacacta
      361 aaatagaatt gctgggagcc tgaagcatga agcatgatat tagataaagt gatgaaattt
      421 cactcgatta aagagccagg tcaaggacag ttacctcagg aaacctagaa tattctcaca
      481 agtttgataa atttatcctc cttttccgct tattttcaat tatcattcaa attatatgaa
      541 tggctgcatt tacacttgct ggcttacaac atattgggta tgacagggat ggtagatttt
      601 tattatgcaa aaaaggggag gaggcagaaa atgctccaca ttagagacta taggaaatgt
      661 tagattgatt gtttgtgttt t
//
LOCUS       KCPA01001553             518 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 170664tic ultra-conserved element locus
            uce-4279, sequence.
ACCESSION   KCPA01001553
VERSION     KCPA01001553.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 518)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 518)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="170664tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>518
                     /note="ultra-conserved element locus uce-4279"
BASE COUNT          170 a          106 c           82 g          160 t
ORIGIN      
        1 cttcaaaatt attgcatcag catttgcaga acagtccatt ttcaagtact cagatgagtt
       61 tgctattaag agcaacagaa gcttaatcat tacatcaata ttttcctaat tagaaaaggg
      121 atagtagcct tgaataaata caaaccctga taaaaagaaa gcagcatgcc agatatctct
      181 gaagacagcg ccaatactgc aagaggtgct tgtaccgtag ctctgcactg ttccctcctg
      241 tgtgttatct gtggtactag agccatctcc ttccctatgt acttccaaat gtgctgcttt
      301 ccttaatttc cttcatcaga agacattaaa ataggaaggt agttttgtaa gtgcaatctg
      361 ctagttctaa aatgcgttca gcagtttaaa catacaaaaa caagcaagat ttcaaagttt
      421 gtcatatcaa tttaataaac tccatttaat acatttcatt tcatcatcag aagctcacaa
      481 aattcactgc tgcagtgttt cccattttaa tgggacaa
//
LOCUS       KCPA01001554             597 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 170773tic ultra-conserved element locus
            uce-4088, sequence.
ACCESSION   KCPA01001554
VERSION     KCPA01001554.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 597)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 597)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..597
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="170773tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>597
                     /note="ultra-conserved element locus uce-4088"
BASE COUNT          168 a           96 c          127 g          206 t
ORIGIN      
        1 gtaataattt gtagtgagag atttaccctg gaagagatgt gaaacatgca cagctatttc
       61 tgttagtgct ttatttcagg caaagttttt tgcattgctc tagccatgca gcgatctgta
      121 aagggaccct accctgatac agtttgaaaa gtgcattttg ttcttggctc tccctttgat
      181 cgaattaatc tggtcttttt tgtagttcta aaggaggcct atgggctgac aatgtagctg
      241 tttaaagggg attttagggg ataatagcca atgcaaatag tgccatgaga atggcaactt
      301 gcttttgcac tttcaatcac ataataacag caaagaaagc ttttaaaatg aattgaaatt
      361 ttgtggcttg ccatctggga ttatttgggg aaacagttct gaatactatg gttgtgtaaa
      421 agaatggtac tatgggacac tcttaagctg acatgtttca gatggcaccc ttatgctaac
      481 tgctgcaaag ttggctagca ttattatttt ctttcttctg gattatctgc aaaaaattct
      541 ctttgctggt atttggggct gaaaaacttt tctattgtta aagaattcaa ttcaaac
//
LOCUS       KCPA01001555             683 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 170883tic ultra-conserved element locus
            uce-7902, sequence.
ACCESSION   KCPA01001555
VERSION     KCPA01001555.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 683)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 683)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..683
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="170883tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>683
                     /note="ultra-conserved element locus uce-7902"
BASE COUNT          215 a          124 c          122 g          222 t
ORIGIN      
        1 cacatcacaa agtgaattgg gtcatctcag ggaaatataa aagcattatt cttctgagat
       61 ttgaaaaaaa tacataatta cttcttccac caagcatgat tcttttaaat aaccttcatt
      121 tttgtccctt ggaaatgaaa agaggtttac attaaaaagg catttcttct gactctctgt
      181 ccttgagcag cacaaaatgt aaactatacc tttcccttct tcctttgaag aaaaaggagt
      241 ttcaatcttc ttctgtgaac acggtccatt taaataagga gatggagtcc catcttttcg
      301 atcagctttc tttgtttgac ttgtcagtaa taacacttta gctgaaattg tacaggcgtc
      361 ctgctaattt agtaattatt gacacggtgc tgggcaagaa atgatagcaa acatagggaa
      421 ctgttaagaa gaaatgaaat aaaagatctt catatcattg ttgaataatg gttgagatca
      481 ttttgtgctc taagtaggcc caagacacct ttttccattt tctcgacaca tttataattt
      541 atgctttgta atagttccaa atatttttag gactccgcac tttgtttgag aatccagaag
      601 aactgaatga gaatcacgga gtgcacacac agacgagtaa ggggtgtgac ctgccatagc
      661 ttttggttta agaatgatcc ctc
//
LOCUS       KCPA01001556             530 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 170990tic ultra-conserved element locus
            uce-3369, sequence.
ACCESSION   KCPA01001556
VERSION     KCPA01001556.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 530)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 530)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="170990tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>530
                     /note="ultra-conserved element locus uce-3369"
BASE COUNT          150 a          112 c          102 g          166 t
ORIGIN      
        1 cccttctgtt taggaacgaa cgtgcaccaa cctcgcagtg aaatattgca ctttcagtag
       61 tatttggatt cttctgtttc agcacaagtt tctaagaaaa ggaagagaga caaaaagata
      121 gcaaaagaag gtgatctatc aagctctaga gaatacaagt gctgctgccc tgggcagttt
      181 cactacagca ctggagaaaa caaagactac tatagcagcg tcgggacgtg ctcttttgaa
      241 gctgttgagt aggcacaaac ttcttgtttc agatcaagcc ttgtatcttc ttcagttaag
      301 ttgcctcttc tttggtcttg agttttcctg atctgaactt gaagcagcag tttcaggtgg
      361 taaattctgt tctgttccac ttcatactgt atcacttcaa atgaaattct catcaaatca
      421 gtttgcaagg gaccttccat ctacttccat tctataataa caggtgtatt tcctctatta
      481 atacagtagg tttaatccac gctaggaaaa gtacttggca tttccacttc
//
LOCUS       KCPA01001557             635 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 171099tic ultra-conserved element locus
            uce-905, sequence.
ACCESSION   KCPA01001557
VERSION     KCPA01001557.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 635)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 635)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..635
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="171099tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>635
                     /note="ultra-conserved element locus uce-905"
BASE COUNT          215 a          103 c          137 g          180 t
ORIGIN      
        1 tttaaggaat agcactattt ataaaataaa tataaaatca ggtctccatt ttgcgcaagc
       61 aacaaattat gagaactcca gcagctgtat atttgttgaa cacccgcctc ctgtgagtat
      121 aaattgcacc ttactgagta gaaataaaat acagtccacc agagactttg ctgcaaggtg
      181 tagctgcttg tgtatgggca agtaatgact tgcattttca gctgctcctt agtaagagcc
      241 ttagtaattg gaatcagtta ttcaaaacat ctctaaatgt gatttaaatg gcaaggattt
      301 aataacatag aaagaagtca ttacagaggt tcaagcaggg gagaagggaa ttccgttttt
      361 cagagcagag ggagaaaaat aaagcaatta cttgatgtaa aggccagaaa caggactcct
      421 gctgtcacag agaaatcaaa tctgtcagca attagtggga tcttaggagg caaagaaccc
      481 ttcagtgttg aacagtgaat aaggggttag caattatatg aactgataaa agtgttctgg
      541 ttttcaaaca gcaggttaac aaggcttact tttttcataa cttcatgcag atgtgatgag
      601 tcacactttg tgacattttt caggaggact gtatg
//
LOCUS       KCPA01001558             369 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 171203tic ultra-conserved element locus
            uce-94, sequence.
ACCESSION   KCPA01001558
VERSION     KCPA01001558.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 369)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 369)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="171203tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>369
                     /note="ultra-conserved element locus uce-94"
BASE COUNT          121 a           63 c           72 g          113 t
ORIGIN      
        1 ttaccttaaa attatttaca gttgtaacca aggggaggta tttccatggg ctgtcagccc
       61 ctgaaagact gggataatat tccctgctcc ctgacaagac aaattaccca taatgagtgc
      121 agtagctgaa gggtatactt ttattttaaa atatgtcaat aacccagtga ctaaacgaat
      181 attgattcag cataatgaag cctgagtaat gtgaaaatga gctcttcaag gagcatggta
      241 aagactttct ttttagcttg tagcaagaag cttttcattc tttactgtta ggtagttgaa
      301 atgtgcagtc ttaaacaagt catccttaaa ccttggtaat atgtggagta atgcaacaaa
      361 agaacttca
//
LOCUS       KCPA01001559             674 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 171314tic ultra-conserved element locus
            uce-754, sequence.
ACCESSION   KCPA01001559
VERSION     KCPA01001559.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 674)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 674)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="171314tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>674
                     /note="ultra-conserved element locus uce-754"
BASE COUNT          239 a          136 c          113 g          186 t
ORIGIN      
        1 aaatagcttt gaaatgaagt ttcctaaagt cattaaagac taaagtaccc agagcttctt
       61 ttgttggagt cctgaattaa aaagaaaaac aaaacaaaaa ccccaacaac aactccctcc
      121 ccacaaagtt cagagtagaa aaattaaccc tgggaaaatc tggaaagcct gagattatac
      181 cagacattca tcctcaagct gatttttttg tacaatcctg tgttgtgctc aaaacaaaaa
      241 tctgagaata ctccttaaag cggaaaacaa agctctgctc cagccataca tctgtgagtt
      301 ttgaaacaaa ggtttgtttg tgtgcctcaa tcactcttgc ctatgaaagc agacacttac
      361 ttgaaaaact tttcagggaa acactctaaa ccaacatcct ggtataaatt tgcaaaatgc
      421 aatacaggcc tgattgtctt tggagaggat gcaagccgca tacgaatagc tctttctgaa
      481 acgtaatgtt ctttgcatgg ctcagtggct aatgtacaat aaatcaacaa aagagcgctt
      541 caagaaagct attgggcagc agcaaggcca ctgttatttt atctttttac agtatttaat
      601 tggaagtttt tcctgaaact ttacccaacc ttcaaattac tagactctgt ataaaaagag
      661 attgataaga caaa
//
LOCUS       KCPA01001560             555 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 171422tic ultra-conserved element locus
            uce-7548, sequence.
ACCESSION   KCPA01001560
VERSION     KCPA01001560.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 555)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 555)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="171422tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>555
                     /note="ultra-conserved element locus uce-7548"
BASE COUNT          177 a          108 c           95 g          175 t
ORIGIN      
        1 tcaaatgtat taaatccagc tctgagtttg tggcacagat ttgagactaa catgctgttt
       61 gatttctctt tacatgacta gacccatgaa gtgtgcatgt gtgttcatgt gtcctctctt
      121 gtacccattt ctattgcgtt ttgcatttct gtcaatatag cctccaatat ttgaatccac
      181 tgatagaaca gatgcagtaa ttgcaaacag ctgtaaagta ttactcatct tgctaatcaa
      241 aatgactttc tgctaaataa accatgaaaa aagcttttcc accatcagtg aagtggagtg
      301 gaaatgatac agactgtaaa gagtccacca tggaagtaaa atcaacagat caagtgttcc
      361 tacaacaatg attcaacgtg ttaatgcaca tttccaaaat tgttatagaa atttctctat
      421 gtttaggaaa atgtatttgt gtacacaaat gttcctccag gtattttaca tgataccacc
      481 agattcacag agccgaagaa ctgctttatg ctttctcaag attcatgatc caaggggaga
      541 taattacccc aaacg
//
LOCUS       KCPA01001561             451 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 171528tic ultra-conserved element locus
            uce-2073, sequence.
ACCESSION   KCPA01001561
VERSION     KCPA01001561.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 451)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 451)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="171528tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>451
                     /note="ultra-conserved element locus uce-2073"
BASE COUNT          164 a           78 c           71 g          138 t
ORIGIN      
        1 aataattcaa tgtaattttg taaatatgga agagaaatgt ttttagatca tctgaaagtt
       61 ttctcctttt taaaattacc aaaatagata ccaaaccaaa agggatatat actattttgc
      121 ctttttcttt aagtagaaag attgactaga tattaacaca aatgggctta aatgtgaagc
      181 tgccataaaa gcaggcacat aaatgtaatt ctcccagccg ctattttgat gcacattttt
      241 gattccatga atattttatg aaatggccca aactaaagcc atataacatt cctgcattac
      301 tgatgcttgc gcccgtaagc tacaaacatt agaggcatga ttgagtgcat taaaatgaac
      361 tcattcagca gtgcattgat tacttgaagg aagttactcc cacttaagaa aacagcacac
      421 aaacctgaag tttccaatac tgaaattaga g
//
LOCUS       KCPA01001562             679 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 171637tic ultra-conserved element locus
            uce-4874, sequence.
ACCESSION   KCPA01001562
VERSION     KCPA01001562.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 679)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 679)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..679
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="171637tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>679
                     /note="ultra-conserved element locus uce-4874"
BASE COUNT          223 a          106 c          128 g          222 t
ORIGIN      
        1 tttacttgaa agcttgtaac tcagacaaaa tatttctgga ataagtttca tttaagcaga
       61 acaacagtga agttagaaac atatttgtgt ctttttttca tgactagccc atgtctattc
      121 tctatgaaat tgatgtcaaa aaagtattat atattttcag tgggaaatag aaggctgccc
      181 tctactatcc ttgtcaggac gtcgtatccc tttaatcata cttttcattt cagtacattg
      241 aaatttccgt taccaaggac aacatcataa ataaaagtgt ttgtgaaatt tttacctgca
      301 gcttcctaac tttgtgcatt aagcatgagg ctagtagaga ggtggtcaaa tgtgaaaatt
      361 tataatcatt tattacgtac ggctgaagcg agaagggaat aaaagcgtga aggcatacat
      421 ctataaactg aagcagaaaa gcttaaatga aaagtaaagt gaatttctgt gtcttgtcat
      481 aaagtaatga gaagctagag ctttattcat agcaacccaa gatgcattta ctctcaatct
      541 agctttagca gtaaatgctt ccctgatgta ttgcttcgga cttgcaaaga aatatttgtg
      601 ctctacataa tagtatagtt aggagaatta ctgcatggct gaggagattc tataaaggtt
      661 tatagctggt gctgttact
//
LOCUS       KCPA01001563             557 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 171743tic ultra-conserved element locus
            uce-1173, sequence.
ACCESSION   KCPA01001563
VERSION     KCPA01001563.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 557)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 557)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..557
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="171743tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>557
                     /note="ultra-conserved element locus uce-1173"
BASE COUNT          174 a           84 c          111 g          188 t
ORIGIN      
        1 tttggcaact gtagtgctgt gatttatata taacttgtag accttagcag caaatgctca
       61 tcattttaat ggtttcagca agacaactgg cttgcatcag ttttgtagtg cgaggctcat
      121 aagactgtgc atataatagt gatactgtca tgtgttaaat gagcatagct tgaagtatta
      181 taaaaattga aaggttgtgg cagtaataaa aaggttgaat ggtaatgtct ctaattgaag
      241 agtaaggcct ctttcctatt aagtcactct ttcatctgtc tttttaatta ttgcattatc
      301 attttgtact gcagttcaca atgaaacgac catttgtgtt taagtgaaag ctaattatta
      361 ggactgaatt attgtgcagt ttattgatcc ctatggtgga ttaagggctt taagttcgtc
      421 tagacagaat agttagcaaa atgacaaaag gaaacatata agacccttgg gaagaatccc
      481 cacgctccat aagcaattaa tgcctgccag gtaatggaat ttaagtttat actaaatcta
      541 gcagtgcttt gacattt
//
LOCUS       KCPA01001564             413 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 171848tic ultra-conserved element locus
            uce-5582, sequence.
ACCESSION   KCPA01001564
VERSION     KCPA01001564.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 413)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 413)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="171848tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>413
                     /note="ultra-conserved element locus uce-5582"
BASE COUNT          122 a           80 c           77 g          134 t
ORIGIN      
        1 tttcttctag aacctgatcc agcagaagaa tttactgaac caactgaagt tgaatcaact
       61 gaggtattat tcactgaaag actgtcattt tgtatacctt caatgccact tacttttact
      121 ttcataccct ttcttatttt tattttagta tgtaaacaga caattcatgg cagagactca
      181 gttcagcagt agtgagaagg aacaggtaga tgagtggaca gttgaaacgg ttgaggtaag
      241 atcttgtata ctgcaggtaa aattgcaatc cctgtttctg ctggctcaca attcgtgata
      301 ggttttagta ttgcatccct tctccccctt taagtaggct tggacccaat tacgtactta
      361 gctcaggagt acctaaaata aaaagaaaac cttgcagaga acttgctttt ctt
//
LOCUS       KCPA01001565             695 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 171957tic ultra-conserved element locus
            uce-6688, sequence.
ACCESSION   KCPA01001565
VERSION     KCPA01001565.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 695)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 695)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..695
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="171957tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>695
                     /note="ultra-conserved element locus uce-6688"
BASE COUNT          236 a          113 c          118 g          228 t
ORIGIN      
        1 tgaagagtca tgtaaacata atgcactggg atctgatctg gttttgatta gttttctggt
       61 attttgcaag gcagtacatt ggagtgtcat ggtaatcaag gactattatt acctagagcc
      121 agcaataacg agaatggaac ctctaatttc aaactataag ataacacatt gattaataac
      181 aattggatga ttagtcaatc caagacctta atgcacaatg gagaaattta tccattatct
      241 gttcaatgta attcttcttt cctcttggtg actttaaaaa caaccaagga aaattactgt
      301 ccctcagtaa aggcttttga atttcatatg catttaatta gataactgcc agcccaagga
      361 caggaaccat gacaaatagt tgttctttta aaattagaag aatagactgt tcaatgaaca
      421 atattgatgt tctcttgtac tgagttatac atctgctact acttccttta atttatctaa
      481 ccatttttaa gatttaatga ttttttaaca cggttttagt tacatatgct agttggtcat
      541 tttaaaaaat gttgctaaca gcaacagtac ctgcacagaa aaaatgcata ccccaccaca
      601 gtcttcttgg aattagggat gaaagtacaa tttacttaga aaaagggcat ttgggattaa
      661 gaggccatct ttatgttggt agaaaaacaa cagtt
//
LOCUS       KCPA01001566             717 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 172066tic ultra-conserved element locus
            uce-5532, sequence.
ACCESSION   KCPA01001566
VERSION     KCPA01001566.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 717)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 717)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..717
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="172066tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>717
                     /note="ultra-conserved element locus uce-5532"
BASE COUNT          205 a          158 c          130 g          224 t
ORIGIN      
        1 acaaaggata atctatattt tctggattcc aatctgctaa gatcataatg ttataaaggt
       61 tttgcaacta ttgcctaaga aacaatttta aattctaaac tgctcacatt tttacttcag
      121 aattcacctc attcactgaa atgttacctc agcatctatt aaggttttgc cttgagcaag
      181 gaattttgtt ttattttgtt tttacatttt gtctgcttct aaaatgaagc tatttaatcc
      241 cttgtcatca catggtcata aaacttgcag gcagacagaa gttagcagtg gctgcttcac
      301 aggccccaca gcaatgcatg gtaacagatt ttcaaagcag ttcaaagagt ccagtttcca
      361 tctgtgtttg gtgaagggtg caaaaacctc ggggccattt gaaaactctg cttcatctct
      421 aacacttgga ataacaaagg tgttattttt caaagccaca gtctcccctc ctggggtggc
      481 tctggagata cagttcaggg aaggtgagaa acttcagagt agatattctc cttctagact
      541 ttgcctcctt cagggagttc ttttgaggat gccacaatgg tggcctatat aacatgggtt
      601 actgccagca gaggccaaca gttaatgaac cctttagaca aattctttct tctgatttca
      661 gtacagaaat ctacaggaaa acagcctcac cccctacaca cccttctctt caagccc
//
LOCUS       KCPA01001567             699 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 172176tic ultra-conserved element locus
            uce-6382, sequence.
ACCESSION   KCPA01001567
VERSION     KCPA01001567.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 699)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 699)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..699
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="172176tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>699
                     /note="ultra-conserved element locus uce-6382"
BASE COUNT          230 a          154 c          109 g          206 t
ORIGIN      
        1 tgtaccattg cacacaagtt ttgtgagcag acataaacat ggaagttcac acaataatta
       61 aataaacaga aagcagaata gctgggaaga ttccaaacaa cacgtcttat tatttaatca
      121 ccctgcaaac acatttcaga ttattctttt ttattagttt catgttaaaa tgcaaatcac
      181 atactgtagt tttaatgaca caatgaaata gtttttggca taaagatcta ctgagtagat
      241 ttctccaaac tggcttgtcc aatacatcct ctgctcagtt ttagttcctt ctctacatag
      301 cagctctttt ggtaggacgc caaagcctgt caattaacag taagcctatc ccttatgaac
      361 agaagcaggg actgtgatca tgttcaacta agatcaagga ttagtaaatc agcatggcac
      421 cagattgcag gcactgttta aaccccacaa gcctacaagc cacggcagca atattatatt
      481 ccatctggat gtggagaaca aaatctcatc gttacagagg aactcacttc ttacctttcc
      541 tgtgcaggca attacaagtc aacttaaaat gagccctgat ttaatcatgt tggctctctc
      601 aaatgccagt tagcaaataa ccccatgctg ctaccgctgg tatcttatca aggactttcc
      661 atcaaattac acatatttca ttacacctac tataaatta
//
LOCUS       KCPA01001568             667 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 172288tic ultra-conserved element locus
            uce-737, sequence.
ACCESSION   KCPA01001568
VERSION     KCPA01001568.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 667)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 667)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..667
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="172288tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>667
                     /note="ultra-conserved element locus uce-737"
BASE COUNT          250 a          117 c          100 g          200 t
ORIGIN      
        1 tcctggtcca tctcagagag ccatcctaaa actgcaaggc acacctatgt atcgtcactc
       61 agagcagccc agagtgaaac caggctctta aacaatagca agggggtttc tatgcaatac
      121 aaaaatatat taaaaataca taatgtaact tgtcttaata tacttttctg agtctaaaaa
      181 tatgccagac caaaagaaac atatttacat aaaaagcaga caaggtcaaa taacaaagaa
      241 agcccttaat tagttgtaat caactttaat ttgcataccg tatataattc ctaaatgatt
      301 gttaataata actttatata atggacttcc aattttcatg aaaatggcac attttgataa
      361 gcagacacaa aaccctagta ctaataaggt ttaatttgca tacattagac tgattatcca
      421 aacaaaagga ttacagtatt acttctccat acctttatgt ccttattatg cacatttatt
      481 aacttcacaa aagctagctg ttagtgacaa acaatagccg tggctggaag agaaatctac
      541 agtatgaata aagtgcattt taatgctaag gagcaaagtt tatattgcat aaatgttttg
      601 tttaactctt tcttttgcaa aaggcattat tgcttagtac ggcaggcact attagaagga
      661 taaaaca
//
LOCUS       KCPA01001569             483 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 172394tic ultra-conserved element locus
            uce-1318, sequence.
ACCESSION   KCPA01001569
VERSION     KCPA01001569.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 483)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 483)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="172394tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>483
                     /note="ultra-conserved element locus uce-1318"
BASE COUNT          174 a           73 c           71 g          165 t
ORIGIN      
        1 ttatcacaac tacacaggca tacaatatgt gtcagtgtct tcaagcatat ttaatatctt
       61 taaattttta aatgaaaatg tagctgtcaa ttttaaacta atttggatgg acagcaataa
      121 aatgcaaacc tcacttcaaa ttagaatttt cagtgaggat ttctaatgga aagtaattgc
      181 tgacaatagg aaatgacaaa ttactaatta cttagttcaa ttagactttt gtgcctttgg
      241 tcctaagtgg caagcataca gcaaatcttg cacttttgta acaattaatg acactaaaac
      301 tatttaaact gccaacagat gtgagtaaga ggacatgaat tgaaacttac ttaatttaca
      361 tactatccca attttgtacc aagtaaatgg tgtttaattt ttatgttaca atcaaatatc
      421 actggcataa tgtgatttct gcagaactca gaataaaata gttttttagt gctaatgctc
      481 tta
//
LOCUS       KCPA01001570             749 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 172506tic ultra-conserved element locus
            uce-7546, sequence.
ACCESSION   KCPA01001570
VERSION     KCPA01001570.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 749)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 749)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..749
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="172506tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>749
                     /note="ultra-conserved element locus uce-7546"
BASE COUNT          217 a          159 c          135 g          238 t
ORIGIN      
        1 atttgcaaat acccaaatct tctattgttt gaagggttta ttttgcgaca cagaacctat
       61 agttactgca cccctttttt atgattagct gaagcacaga caaatcatga aaagacaatt
      121 gtacactttc ttgtgttgct ttatgggctt taagtgccta caaaaaagga ttccttatgc
      181 tttaatttct ctttattttt ttgactgtaa agacccatgg ggtaaatgcc agtcccacaa
      241 tcctgcagtt atatggttac tgtcagcctg ctcaaatgat gcttcctgtt cattaggcat
      301 cctttcatct gacaacaatg tactggcttt gctgcaattc ttagtcaacg cccatctctt
      361 caatagcctg tgaatagtat taaatagtgt ttatgctagc tattgttgcc ttttgtgtgg
      421 tttgtctaat tcacagagaa aagtctgctt ttgtggtcta aggctggcta cgtcatggca
      481 cgccatgtgc cttctgatgg gatccattcc tgctgagtga taacattaca ggtctcaact
      541 cctttgcaat acaatccagc attcttaaca cagtcaatac actcacaggc aatctagttt
      601 actctttata ttaagaggtt tagggagaca aagctcatct aaatacctgc tcgtgaaaca
      661 agtaagatga attcaaccaa tttgagaaga tcccacacaa ctacacaatg agcaccagaa
      721 ataaaaagaa gctgagcagg gaatgccca
//
LOCUS       KCPA01001571             545 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 172609tic ultra-conserved element locus
            uce-3613, sequence.
ACCESSION   KCPA01001571
VERSION     KCPA01001571.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 545)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 545)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..545
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="172609tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>545
                     /note="ultra-conserved element locus uce-3613"
BASE COUNT          160 a          110 c          100 g          175 t
ORIGIN      
        1 cattttgctt ttccatgcag caaggcgctc actgcattga taaattttaa gtaatgagga
       61 gtacaccaaa atgtgcagtg ctgtccctca tatacacaaa atactcagaa cattaaagaa
      121 agctgttaag ctaatctggt gcatctaaat gggcaatata tattgaatcc atgctccatt
      181 gatcataatt attgcggcgc cctttatcaa gtaaccatct taaaccatta tttagagatc
      241 attttgcttt ccattactgt cactatattg cagaatttgc taggaattgg cagctgtgtg
      301 atagaggggt gtgcagctct gttagtctgg aatctgctcc tgttatccaa caatgtttct
      361 aaaatgagag acttagtgca gtattcacat aacttttggg cagcctttaa cttcattctg
      421 gagtgacaag tcactcacat aagctttgtt tgccacataa ctccttcccg aattctttgc
      481 atgtttccct taaaattaaa agtacagccc ttaagaggta acgagagtta tgaaatggct
      541 gcact
//
LOCUS       KCPA01001572             497 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 172715tic ultra-conserved element locus
            uce-2507, sequence.
ACCESSION   KCPA01001572
VERSION     KCPA01001572.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 497)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 497)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="172715tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>497
                     /note="ultra-conserved element locus uce-2507"
BASE COUNT          170 a           77 c           90 g          160 t
ORIGIN      
        1 gttgttacca cgtcttaacg attgtttatg gaattgttta agacagcaag aatctcgggt
       61 cttctctttt ttatgaaggt caaactaaat tcagaattat aactgaaaaa tgaaatgtaa
      121 ataccaagat ctttgataac aaagtaatta aaatgtatgg ttttgcctac tgtgtataat
      181 aagggcttat atttgatcaa ccataaaagt tatttaatca ttttaacctt ggaatactac
      241 cccacaaaaa actacttaat ggaagttagc tgagaagcat tagagtatca caacatcaag
      301 aaggctgagc gagagggcac tgaaaattca agcacagctt atttctgcca taatactata
      361 gcaggttgca tggcaaccag tggctgtgga ttttgaagtt actttatccc tattcaatga
      421 gcaaagactt agcctgtatt tattttggta atttgtagaa ttaatcaggt atttaaggcc
      481 cagtgtagca taaactt
//
LOCUS       KCPA01001573             447 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 172822tic ultra-conserved element locus
            uce-6267, sequence.
ACCESSION   KCPA01001573
VERSION     KCPA01001573.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 447)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 447)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="172822tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>447
                     /note="ultra-conserved element locus uce-6267"
BASE COUNT          150 a           77 c           63 g          157 t
ORIGIN      
        1 aagattttgg agaaaagatc acaaggtagc aaacaagaag gagggtttat tttctttaaa
       61 aataaccatt atcacattac tgaaaaattg aaataaatta ttttgaaaca gatatttcag
      121 aggtcttaaa agcttagaac agctatctac tatcaaagta cacatagacc ctctgagaat
      181 acaatattca ttttgctgca gaagaacaga cattgcataa caatgagatt tgctaatgaa
      241 atcagccatc aacctggaat acatttgtac taagccaaga cctcagtgtc attttctttt
      301 tgtgtcattt gttctttctt tcattttttg atctttcaag tatcctgttg gttcctgctt
      361 cctatactgc aaaatattta ttttacaaaa ttctctgctt actgctaaat gtagattctc
      421 attacatagc ttctatcagc attgtta
//
LOCUS       KCPA01001574             606 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 172931tic ultra-conserved element locus
            uce-7658, sequence.
ACCESSION   KCPA01001574
VERSION     KCPA01001574.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 606)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 606)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="172931tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>606
                     /note="ultra-conserved element locus uce-7658"
BASE COUNT          174 a          132 c          124 g          176 t
ORIGIN      
        1 ggtacctgaa caccactgtc tcatttataa taccttgtgt ggtgtgacag ttgttatcac
       61 accatggtgt acaggactca ataaaaacac acacagaaca ttcttcactc caccctgctc
      121 atgattcgag ctgtcagtgt agagaggaag aaactctgca cttctcccat atgagccttc
      181 atctgcttcc tccatcatgg aaattgtcca gagtcccaga gaagtgttca caggcatttg
      241 ttgtatgcaa atagctgcca aataaatcat tgtatattgg gggtttgtac ctatggaact
      301 tgctactgtc actccacttc cccatatacc ttaatcatgt tattccttca gcaagaagga
      361 tgaatgttac agcatgagac tttaatccct caccactgag gatctgattc tctagagagc
      421 aggaaatcca gagggctgaa ggtgagagtc aattatttct tggcactggg tttacacaag
      481 gttgtattat aaaacttcct aaaatacttc aggagaaatt tattgcgtga gtgcacattg
      541 actgtgcatg tgtgcatgcc aagtctgtaa atacagggct tgaacttcag gcagagaatt
      601 tgcaac
//
LOCUS       KCPA01001575             709 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 173040tic ultra-conserved element locus
            uce-7358, sequence.
ACCESSION   KCPA01001575
VERSION     KCPA01001575.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 709)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 709)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="173040tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>709
                     /note="ultra-conserved element locus uce-7358"
BASE COUNT          189 a          162 c          165 g          193 t
ORIGIN      
        1 gaggatgcca agattgccct gaacagaatg cttttctgct ctttcaacac agacagctct
       61 tctctgcaac ttcccttggc gctcagcaaa gagcaggagg tgattgttcc accggaaagc
      121 caactcctgg agtagggatc cccttgaggg attaagtccc caaaagggtt aatgcaacct
      181 ctcttttccc ccaatagcta catggtccta acaactttca ttgtgaaatg ggtgcaggtg
      241 tgggctatgc tttgttgatc acaatccctt ttgcagagga agctttgaat atgtttgaca
      301 taatcagctc acagcctttg cccgcactct ttcataaaca ggccattttc acatcctttt
      361 catgggatcc gacaagcgga aaaataatta atgttacctc agcctaacag tgacccagct
      421 ttgattcaaa aagacggcat gttgcataaa ctaaccattt aattgagtga tagaaaaagc
      481 ccacatgtat caattctgcc tccacgtatt atgattactg gggctttgca aggattgtgc
      541 tccctcggtc ataaagcaga gcttaaattc aagcccgtga agtggtttca gaaggactga
      601 ttgagcatga gctggggatt atctgtgttt atggtggtag gacatgggag caggggaaga
      661 tgtgggtacc cagccaccat ggcgcacgct caggttatgt ccaggttat
//
LOCUS       KCPA01001576             439 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 173143tic ultra-conserved element locus
            uce-5623, sequence.
ACCESSION   KCPA01001576
VERSION     KCPA01001576.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 439)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 439)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="173143tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>439
                     /note="ultra-conserved element locus uce-5623"
BASE COUNT          156 a           60 c           78 g          145 t
ORIGIN      
        1 acaatttatg gcaaacaaat gagggatttc acatgctgta gggatttgtg tttacaccaa
       61 gaaagaacag ggcccataaa taaaattgtt tggaaaacat ttactgctgt catactgata
      121 atgcatttta aatcctgggg ttatcaaaaa aatggatttt tttcctccat attgtttgac
      181 agctgaaatt aaacaaattc tattgaagta caaagctaat agaaggttta ctatgtgtgt
      241 cattagcacc atccatataa ggaaacagaa aatatgaggt gtggattttt aaaatatgat
      301 aaaatgagag caccattaga tgcatatgaa ggtgtgactt caggccaggc atttatttat
      361 tagaatcaaa gtgactctat cttacatttg taaataatca ctgttatgcg attcaagttg
      421 acatctttaa tattatttt
//
LOCUS       KCPA01001577             813 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 173254tic ultra-conserved element locus
            uce-855, sequence.
ACCESSION   KCPA01001577
VERSION     KCPA01001577.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 813)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 813)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..813
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="173254tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>813
                     /note="ultra-conserved element locus uce-855"
BASE COUNT          240 a          178 c          153 g          242 t
ORIGIN      
        1 agttgcccgg gctccagggc tgcagcccct ccctgctggg agccagacgt gggagggaac
       61 tccagaggag caaggtgaga taaagaaatg cggtatttcc aagagagagt ttgtcaccag
      121 ttagctaaaa ttgcttctga agttttgctg gcaactgttt tacatgtctg acttggtgac
      181 gaaggaactg tactatctta atagagaact ccagaacttc agaagggttt ctccttgttt
      241 gaatgcacag cacaatgaat ttgtacccac agagcattca ccacttacat ttcaaaacct
      301 acagcacact aaacgtgaaa cttttgttca aatttcaagg attttgatag cccaagtgaa
      361 tagacactgc ctattgattt ttcccttaca atgactcttg gataacctat tttctcattt
      421 atttttaacg acagctcatg agattttaca gcaattctgc ccaacctcct aatatcaaaa
      481 tccctccttg accctgaaaa ttgtaattct gctatagatc acagctgctg aatattacct
      541 tttactaagc tggttaaata aaatatgtcc aaatcactag atcccacagg ccatgactgc
      601 aattctaatt atacagggtc tgtatttctg ctctacagta cagaaaagca cagctttctc
      661 tgagtccaca ccaaagtgtg ggaatccaga atattggttc tagttttgaa tttgacacgg
      721 ctcttcaatg attttcctgt aaaactttta caagggagcc aaaccctttt gatgtgttcc
      781 atacaataaa atgctgtgta agtctggagg aca
//
LOCUS       KCPA01001578             715 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 173362tic ultra-conserved element locus
            uce-4644, sequence.
ACCESSION   KCPA01001578
VERSION     KCPA01001578.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 715)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 715)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..715
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="173362tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>715
                     /note="ultra-conserved element locus uce-4644"
BASE COUNT          201 a          142 c          148 g          224 t
ORIGIN      
        1 agagaagaca gtacttgcta tcatctattt actgtcaaat taattcagct gctcctgaga
       61 agccatctgt atcaggagag cgagggtgtc actagcttta cgatccatca ggagaagtga
      121 gagcactgtt ctgtttgatg gctctgataa tggaaagaag ctaagcaatt gcaacagata
      181 catcatagat tttctcataa ttacctgacc tgttacactg tgtcactctg ccgccaaaca
      241 cactgttttt atgtcagaat ctgtatgggc attctttact ttgatcattc tgtattctgc
      301 agatgtcagc attactgtat tttaattgac tctggggtag cattaaaaag caccttctat
      361 ttcagttgct tagacctgat gagactgaca acctggcatt tatgaacatt aggccttcgt
      421 ggtaactgtg tcaggaactg tgtttttcct aaatccccta ggtacaaata gcaaactgat
      481 gttagtaaac caatgcagtg tctatgcaga gagcacctct gttactctgt agccataaag
      541 acggcaaatt aaattaaact cttgtgtcaa aagtgtatgt tatatcacaa tgtgcaatta
      601 agaattgact ggtgtgctga aagagggtta gagctggtga gggctgaagt tgtgatttct
      661 tgacaacttc catattccca gtatgccccg ttaaccagga ccatgttttc ctcct
//
LOCUS       KCPA01001579             553 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 173473tic ultra-conserved element locus
            uce-4764, sequence.
ACCESSION   KCPA01001579
VERSION     KCPA01001579.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 553)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 553)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..553
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="173473tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>553
                     /note="ultra-conserved element locus uce-4764"
BASE COUNT          174 a          122 c           97 g          160 t
ORIGIN      
        1 ccgtttacaa ctccgcagtg tcgcttagta ttctaatgca tcggtcagat agcacgacta
       61 atccacgcct agcttttcca attaaaacat ttctgtaatg ccaaacaaaa caggacgtcc
      121 atagctacag caaggctgac tgctggagtc ctaattccta ctatcttttg cttctcagca
      181 gctccctcag gagaagctcc catcgattgg atgctccgca gcaagatgaa atatctaata
      241 aggaggaaag agagtgggag gggaacggag ctaaaaggat gacatcacct gtatagaaag
      301 cctttagaaa ctgcattaga tcaattggct actggatctg cagatgcagc caacagagca
      361 tctttattga cctaatataa acacacatat cagtacaact gctcagcaaa ttttatatct
      421 ttttaatgga actctgatta ttttcctttt taattaatca catgcatcta ctaacacttt
      481 cagcagcatt taggtcgatt atttttcatc tctgcattca aatttagaag taaaataaat
      541 atctgcagcc att
//
LOCUS       KCPA01001580             700 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 173587tic ultra-conserved element locus
            uce-1723, sequence.
ACCESSION   KCPA01001580
VERSION     KCPA01001580.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 700)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 700)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..700
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="173587tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>700
                     /note="ultra-conserved element locus uce-1723"
BASE COUNT          228 a          132 c          124 g          216 t
ORIGIN      
        1 tgtttcagat tgaaaaaaaa aaattgaaaa aactgacccc tacaactgaa caaactcagg
       61 ttttgagtgt caagtgccca tacaagagca atcagcaccc tgcaaaggtt cagaacaaaa
      121 gtataactgt ctcaacctat ccatttagaa agaaagaaga aaagtgaaag catcactgac
      181 ttcatgcttt attctctgac agtatccatc tttccaaatt gatttttgat atccgtagtg
      241 acctggaagg gagacacagc gataactctc agaaagtgga aaacaatatt attcccacaa
      301 atatgaatta cttgccggca ggttaaatct actgtgcaat gaattatgtg accctggagc
      361 tcctataatt cttttgaatt ttatagagtc gtgagagggc ctgtgagctt tgacaagcac
      421 ttaacagcca aaatcagtcc tgaacaactc tcttggacat ttgatttagc cgttgtaggc
      481 agaacgttgc cactcaattt tgcttttgaa gcaaaagatg acattcattc atttctgaag
      541 ttatagattt tatttgttga ttttattgta attctttttc actggcatct tttctgtttt
      601 gttatgccac tcaacacaaa taaatatagg agcaggttgt caagaataga ccacagctca
      661 ggctttattc ttaagaaact ctcagtatgt caaagtttgt
//
LOCUS       KCPA01001581             808 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 173698tic ultra-conserved element locus
            uce-616, sequence.
ACCESSION   KCPA01001581
VERSION     KCPA01001581.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 808)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 808)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..808
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="173698tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>808
                     /note="ultra-conserved element locus uce-616"
BASE COUNT          235 a          151 c          178 g          244 t
ORIGIN      
        1 acaatgaggt ttataaggct taattacata agaaacagta tacatgttgt gcaagcttgt
       61 agaatgtcac ttgcagaagt taggcaagat ataagagttt cctaagtttc tattatatta
      121 tttccagcag tattctttga caaactaaat aaattgctgc atgtattgga cctctgaggc
      181 ttggggcaaa gaatggaaaa attatttaca aaagcttgaa aatatttaat cactggaggc
      241 agggggcaac tgtgttttaa ttagaggttc ctcaggccat tggctggctg gaggctttct
      301 caaacaacca cacaaatgca ctgaatagct gtttgccagc cttagggtca ggcctgagat
      361 gaaacagata agataattgg ctctaatgaa atccagaagg ccttggcttt cttgtttgag
      421 cttggatttg aaaagtgcgt gtggaagtga ggcttaattc aaaccagtcc tgaactaggc
      481 ccgtttttca gtgactttga tattgtttga agttctgaaa gtgttcgcca caccactagc
      541 ctgctgggct gggcctcccc agtcacctta attactgagc tttattgctg actttactac
      601 acaggaaagg agccattata tgttccatca acatcagctc tcctcagatt ggaggaaagg
      661 gcagggtgaa aggccactgt aggaaggcaa aaacttcact ttgaggtagt cagatcattt
      721 acccgtgtta aatttcactg tgctatgtgt gtacattcct tacaacacag aagcccaatt
      781 tccatttttt ttagcaagtg attacttt
//
LOCUS       KCPA01001582             586 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 173805tic ultra-conserved element locus
            uce-3671, sequence.
ACCESSION   KCPA01001582
VERSION     KCPA01001582.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 586)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 586)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..586
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="173805tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>586
                     /note="ultra-conserved element locus uce-3671"
BASE COUNT          178 a          150 c          133 g          125 t
ORIGIN      
        1 tatgtataga tacacctgac agttttcata atctactgta aattacctct gccagtcaat
       61 tagtcaggca ggcaggaagt cccaccctgg cagagcatca gtgtaagact cttctttctc
      121 aattttccct cagacacacc atcctgagaa gccacttttt cctaccacag gaagcccaag
      181 agaacactat agctagcagt ctgacagcca aactgaaccc tggccttttg tatcctgcca
      241 ggtttgaaaa gctggacatc acccctaaaa gtgcccagaa gataaagccg gtgcttgagc
      301 ggtggatggc tgaggctgag gcccgccatc gagcagggat gcagaacctt accgagttta
      361 ttgggagcga accatccaaa aagcgcaaga ggcgtacctc attcacgcca caagcccttg
      421 aaatcttgaa tgcccacttt gagaagaaca cgcatccctc tgggcaagaa atgacagaga
      481 ttgcagagaa actgaactat gaccgggaag tagttagagt ttggttctgc aataagaggc
      541 aagcactgaa gaacacaatt aaacgtttga aacagcacga gcccgc
//
LOCUS       KCPA01001583             820 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 173914tic ultra-conserved element locus
            uce-773, sequence.
ACCESSION   KCPA01001583
VERSION     KCPA01001583.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 820)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 820)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..820
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="173914tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>820
                     /note="ultra-conserved element locus uce-773"
BASE COUNT          287 a          144 c          168 g          221 t
ORIGIN      
        1 atatgttgct attaagcaaa ctttattaag aggaattaat ccgttgctgg aattggaaaa
       61 gagcaagccc atatcctgtg agctctaagc tggaaagtca gagcagaaag gaaacaacca
      121 ccacagcact gatagaagtg atcttcttga gagaaataga tggtattttc attttgtttg
      181 ggctgattct gtgctttgta cagcaaagtg aaaaggaaaa cagtagctgc agtaaaagga
      241 aatggccaac agtgactttt atttacaatt accaagagac aggctattat tgaccatatg
      301 tgccacaatc accctcctta tcatgggttg gccatcatgt ccactgggag ctgttaatga
      361 actgggtaat tgagctgctg acatgtgtta ccaaaacaaa acaataggaa gaagagacaa
      421 atgaacattt tatttgccaa tcagagtagg ttccgctttt cagagaactg tgcctaagta
      481 agtggctgaa tacataaaac agtgcattga aggcaagcag atgcatgcac aataatggtt
      541 aactgacagc ctatggccca tctgtgctta acattttgtt aaagaaatta cttgacttgc
      601 taaagagaca aatcatacag ctgccccaag tgctgcatta taagagataa atcattagct
      661 aaactgtttc atgcttaaaa tgacaatgca tattaacagt tatgcaggga cattttgtca
      721 gcacagcttg atgcagttat aagtgacaaa aaatgtgaca gctcatagct attcaatgac
      781 ttcaacttag aagagaatga caacactgta aaaacaattt
//
LOCUS       KCPA01001584             659 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 174024tic ultra-conserved element locus
            uce-5256, sequence.
ACCESSION   KCPA01001584
VERSION     KCPA01001584.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 659)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 659)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..659
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="174024tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>659
                     /note="ultra-conserved element locus uce-5256"
BASE COUNT          209 a          147 c          107 g          196 t
ORIGIN      
        1 aggctgtaaa gaatacagtt ttgtcagaaa taaaagtatg tagctcgagt tttcaaacta
       61 gaccaaccag gctcagagct gatcgagcaa agccaaagca gttctcaaca cgcagctttt
      121 agaaataatt agctgaaaac aggtattgct tcagatcgta gcaaaaatta cctaaactta
      181 agttaatgct ccttggatca aaaacacttt ttaaaaagtg gatacctgcg gtccatctct
      241 ggcttcatag aagtcaccca ctcctatttt tgcactgaag ctgaaattgt cccttgagat
      301 atccattatt ccatttctgc tgagatactg aaaaaatcac atatttttcc acttcagctt
      361 gtaaataatt acaacccagc tttgatgtat agctaacttt gtgagtgtaa cgttttgcat
      421 attctgtcga agggatacgc catcaaatca ctaacactga gatacattac acctcacatc
      481 acagaaagta agtatctcta tcggagagtt ttaattgcaa gcatccttac tagcattaga
      541 acacgtacct ttactacctc aggatactgt ctcagcttct ttccacaagg tgcaaaatat
      601 gctacttctc cttgaagacg accaccaaag tttctaatac gcgtttctct ttgccagct
//
LOCUS       KCPA01001585             399 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 174126tic ultra-conserved element locus
            uce-5735, sequence.
ACCESSION   KCPA01001585
VERSION     KCPA01001585.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 399)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 399)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="174126tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>399
                     /note="ultra-conserved element locus uce-5735"
BASE COUNT          121 a           56 c           65 g          157 t
ORIGIN      
        1 ccagtgaaat ttcaaacacc tatgttttaa aatgcatgga aatctttatg aagtactttt
       61 ttatggagac tctgcatcct ttctaacaaa caagcaacaa tcttgactct gacaactgtg
      121 caaaactatt taatattctt ttcgtgtgga agctgttgtc tgatcattag tcatgtttag
      181 ttgcacctgc aattattttt tcatatattt aatatgccaa ttttattgca gtgactgctc
      241 tcaggaggtt tataatagtg attaaagcaa tgttaattgt tgtgttcatt tcaggattgc
      301 ttcaatgtca gtgtgatcaa tggtaatatt gggaaatgtc aaagtttcca caagtttaga
      361 aagatttaat tagaatttgt ttttttaaaa ctttaattt
//
LOCUS       KCPA01001586             551 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 174231tic ultra-conserved element locus
            uce-3693, sequence.
ACCESSION   KCPA01001586
VERSION     KCPA01001586.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 551)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 551)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="174231tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>551
                     /note="ultra-conserved element locus uce-3693"
BASE COUNT          156 a          114 c          108 g          173 t
ORIGIN      
        1 gactggggaa gtatgatcat ctcaatgcca cagactcctt attcttttct tttctttttt
       61 tttttttccc aagactatcg tatttacgta atcgtcctct tattagggag attctgctga
      121 actgctgaca atgatgtaca gtggtgctgc gctggcatga cgtttgggga aaacgattct
      181 gctgcaccac cacacaaaac caattagaga actattttct gcgacaggtc aggaatttac
      241 attgtttctc atagaaagat gtgcttttta atttctttat taagatgaca tccatgtccc
      301 ttgcgacttt tagggatgac aatcatttgc tcatcacatg ggaaagtaca atcagcaaaa
      361 tcgcattacc agtacggggc aacgccagaa actccaagca tcgttctgca ttttccaaat
      421 gaactagttt gagaaccaat aattagaaca atatatattg atagaatttt ttgacaggac
      481 ctttagacat ccaccagggg ggtagagtaa tgatagttca catacagctg gctccgctat
      541 gtttgccgag c
//
LOCUS       KCPA01001587             685 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 174340tic ultra-conserved element locus
            uce-6764, sequence.
ACCESSION   KCPA01001587
VERSION     KCPA01001587.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 685)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 685)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="174340tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>685
                     /note="ultra-conserved element locus uce-6764"
BASE COUNT          211 a          145 c          103 g          226 t
ORIGIN      
        1 aaatgtttac tgctacatat gttttaatta atttcatttc ccaaaagctt ttctttttct
       61 tacgtgagtg aagacattta agcaaataga gttggagtta ctgaaacatg gttccccaaa
      121 cagtgtagaa taagaaaatg taaactaaac cctgcagatt tcttacctct ttacaccatc
      181 tgtgcagtat tgctcttagg ccttttacat tggtcatcct gggaacaaag ctgaaggcag
      241 attccagcag tttttccatt cactattcat tcagaggttc atcagctcca tatggatcca
      301 gccaactgct gtgttaaatc agagcctttt cccagaattg acatggtaat gaagtcatgg
      361 tattgctcac agaaaaggcc tccataggta ttttcctctc taacaaatcc agccttttca
      421 ccccattcac tccctaaaat tatctcataa cattacaaca tctgtgaact gggtttttgc
      481 cttttaatgt ctagcatgtt ttattacatg actgtgcatt acatactggt taacaagact
      541 cctacacaac caaggaaata aacttgcact cttcccagct cagattgttt catcccaatt
      601 tatatttgca gatagagcta tccaaactat tgatatacaa gatgaacttt tatttgtatt
      661 agaaagtaat attccagaat gaaaa
//
LOCUS       KCPA01001588             692 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 174451tic ultra-conserved element locus
            uce-2865, sequence.
ACCESSION   KCPA01001588
VERSION     KCPA01001588.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 692)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 692)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="174451tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>692
                     /note="ultra-conserved element locus uce-2865"
BASE COUNT          157 a          178 c          192 g          165 t
ORIGIN      
        1 aagtcataat cttgacctgc caaaggcagg tcagaatctt ttgaaatcct ggtgtgacgt
       61 caagttcatt agtagtcact gtgggaggtc actatctaag tcatcagcag tgtttgaagc
      121 tttccacctg cccagttgag aagggcgtca cctgtgacct gagtgcagac agcaagttct
      181 tttcactcca ggtggtgtag gaatgatgtg ctcgctgagc gaacaaggca agcagttggc
      241 agtccaagtg tcaaacatcc tggggatgga tgtgtgcggc attgacctgc tgatgaagga
      301 cgacggctca ttctacgtct gcgaggccaa tgcaaatgta ggtttcattg cctttgacaa
      361 ggcttgtaat ttagacgtag ctggtatcat agcggactat gccgcttccc tgctggcccc
      421 cggccgcttg acgcggcgca tgtccttgct ctccgtggtg tccacggcca gtgagactag
      481 cgagccagag ctgggccctc cagctggggc cgctgtcgac aacatgagtg ctagctccag
      541 ctctgtcgac agcgaccctg agaccacgga gagagagttg ctcaccaagc tcccgggggc
      601 tctcttcaac atgaaccagc tattagccaa tgagatcaag ctccttgtgg agtgatgcca
      661 cgtgtaaata ggtgaccaac agaactctct ct
//
LOCUS       KCPA01001589             506 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 174560tic ultra-conserved element locus
            uce-3277, sequence.
ACCESSION   KCPA01001589
VERSION     KCPA01001589.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 506)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 506)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="174560tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>506
                     /note="ultra-conserved element locus uce-3277"
BASE COUNT          153 a          105 c           93 g          155 t
ORIGIN      
        1 ccctcctcca ccaattcctt tgattgcaaa tgtgttttct tgacccccta ctccatacat
       61 gttagcacct aaccttggct catctgtatt tacagtaatt atatgcataa tgtagcatat
      121 tattgtctgc acttcctgtt taatcagtat tcttacaagt gcagctgaaa agggcaaaca
      181 aaattaaagc tttatatacc aaaacaagtt tgattttcca agctcccagc attccagcgc
      241 acagagattt gttccaccaa gttttgcgat ggcttgcaga tgggcaatga ttaatcggaa
      301 agctaactgt gaagtagttt gcaattaaac tggaaagctc tgcagcatgg taattgaatc
      361 agaaaattag agacactgaa cagtaattgg ctatttctca tgcagcaggt gccaggccac
      421 tcagctgtgg aacaaggtat ttaaggcaca ttagcactag gaaaaatatt tcttgatatg
      481 gaacagtcag attttctgct catttt
//
LOCUS       KCPA01001590             637 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 174767tic ultra-conserved element locus
            uce-5934, sequence.
ACCESSION   KCPA01001590
VERSION     KCPA01001590.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 637)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 637)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..637
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="174767tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>637
                     /note="ultra-conserved element locus uce-5934"
BASE COUNT          194 a          112 c          118 g          213 t
ORIGIN      
        1 tgtaaagaag tgaatgcatt gacacttagt aaggaaatag ttgtcttcta aaagtgcacc
       61 tatgaatgct tgtatttttc tgcaattccc ctgttgattt ttctatccat gattgaaatg
      121 tcctcaactg ctttagctat atgtgtgtat gcagcaggac ttttcctccg tataagaaat
      181 tatgcatcag acaaaagcct cataaactga ccatttgtcc tttggacaca atagcctgcc
      241 cagcccctct gctcctcctc tccaattatg tgtgattagt ctcagtgtgt tgtgtcaaga
      301 agggggagtg tgctgagtgc ttattatctg tttaggtaca agaagagcgc atttaggttc
      361 tgactatgaa tggaaagtga gtctttatca ggactaaaat ctaaatgcta ctatcctaga
      421 aattgcataa attccaagaa acactgtaag aactaaagga ttttatgatg taatcaaagt
      481 atctcctttg aattagttta tattgtgata tattgtggcc cacatatttg atatacactt
      541 aatgtgtttt tcttatactg gaaaagagaa aatcctacaa agaaacagga gcagtatcct
      601 taacagttta acagactgtt ttaatgactt ctcagta
//
LOCUS       KCPA01001591             756 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 174881tic ultra-conserved element locus
            uce-3676, sequence.
ACCESSION   KCPA01001591
VERSION     KCPA01001591.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 756)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 756)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..756
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="174881tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>756
                     /note="ultra-conserved element locus uce-3676"
BASE COUNT          225 a          131 c          160 g          240 t
ORIGIN      
        1 tttttccaaa ggtaacagga aaatgtcgat ggggatgata ttagtgttca tcatagtgtc
       61 cacaggagat ctggggataa ggaatgtgtt tagttttata ggcctgtttc cttatgcaag
      121 taagtgactg tgtgatctag caacctgagt tgaatagcca gtcctttagg tctttcacag
      181 gctatgaata cagtaagagc actcaacact tctgaagata tgcaaatgta ggcatttaaa
      241 agatttacat tcatctttca caggcctcag aaatataaat atgaaatatc cagaaccttg
      301 tcacttcagt aataattaag ctgatggcct attatgttcg attgcaaatc aatatagtat
      361 cttttggtgc cacttgagtt cttgagggtt ggcttggggc cagcactagt tatacaattg
      421 aagagctgca gctgcatcga aaacttctct gccatttcca ttcagaaaga atagactggt
      481 aacaatggtg gccagcctct tcatagtaat tgtgtgcaag tacacatttt gaaatagtgt
      541 ttttgttcag caggtgctgt tattttagtt taatttgaat tctgaaatat ggaggagaga
      601 aggggcctaa tcttaacagc atctaaccta cagctgttca gaacaggaca gcaaacagca
      661 tatgttgctt agatgaaaat cataattgct tattcttcct ggcatattag cagaccagtg
      721 ctgagcctct gaaattatct agcattttca ggcttt
//
LOCUS       KCPA01001592             488 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 174988tic ultra-conserved element locus
            uce-5275, sequence.
ACCESSION   KCPA01001592
VERSION     KCPA01001592.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 488)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 488)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..488
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="174988tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>488
                     /note="ultra-conserved element locus uce-5275"
BASE COUNT          147 a           94 c           81 g          166 t
ORIGIN      
        1 aattcaaaga gttcagagtt acaaaagcaa aattcaactc cgtaattcac ttgcttaatg
       61 aatgtctttg aatatactga agatctgaag cctgaactaa tcaatttctt cgctgtgccc
      121 tagccggtca gccatgctct ttaatttaat gaaacaagag ttttagatga aatagcacat
      181 acacatcaag aaagaattgt attgttgcac tttgaaatgt gtccaactgt gcaacttcat
      241 ctaatgataa tttttttaag aggccatcga tttctgaaag acttattgta ctagcatctt
      301 gatgaaaaag tgaatgtcag catatctaca gaatacttac accctgccat taatgcttta
      361 tttggcagac aatgactact caattgaggg tcctctgggc tgtgcaatca tttagctttt
      421 cttctcttat gaggtcctta gtgtcttgtt ccagttcaat actcttttta ttcaccatta
      481 tagtggcc
//
LOCUS       KCPA01001593             737 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 175099tic ultra-conserved element locus
            uce-999, sequence.
ACCESSION   KCPA01001593
VERSION     KCPA01001593.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 737)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 737)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..737
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="175099tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>737
                     /note="ultra-conserved element locus uce-999"
BASE COUNT          224 a          156 c          160 g          197 t
ORIGIN      
        1 taatgtgcat ttgtacaaaa atcctgtgca ttttaaattt ctttcgggca gtttcttcag
       61 tctgttggag caaagacaga atttctaaat tgtcaaaaag atgccagttt cgggcgtcct
      121 taggataagc caatctattc aattcggaca aaacccacca gtacataata gtctttacaa
      181 gctcataaac caccatacca cccaagatgt taacaagctg gcatgttttg agcatcaaag
      241 atagagagga aactgtgttt acatgtttgg cacaaaaact aatgaggaaa gtcaattggc
      301 cctttgtctt gaaggtctga agagccgcgc tctaatgttt ggtttcttgg ttggcacttg
      361 ttcaagtaat cactcgtggc ctgacaaagc agcacttgtg ttttattagt ggccatgctg
      421 aactctcctg cctgggctat gtcgtctctc aatagagcac tgcaccagag ggcacactta
      481 cttgaaaaca ctaaatcaga gcatgatgat ctttgcccgg caaacacaac caagagagga
      541 ggctctcctt ttgttagaga aagtgaggaa acagcaactg gcatgtgcat gtgtgtaaga
      601 acagtcctga aacaccagtg acaaaatgag caaaactttg ttcccacaat gagatgctca
      661 gagccaactg gatttgctcc atgcttggga acaggacatt ggcaaagcta aaattcatgt
      721 tgctcacaac tgggaga
//
LOCUS       KCPA01001594             693 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 175208tic ultra-conserved element locus
            uce-1800, sequence.
ACCESSION   KCPA01001594
VERSION     KCPA01001594.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 693)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 693)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="175208tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>693
                     /note="ultra-conserved element locus uce-1800"
BASE COUNT          191 a          132 c          170 g          200 t
ORIGIN      
        1 aaatgagatg gttacttgtg gcacgggagc gcctgcggag cgagggagcc tggccgggga
       61 gtaattcccg ggaattgtga gcggacagtg ggtccgcggg gagcgctggc aatcatggcg
      121 gaaacaatgt ttgcatcgat cagctgtcac ggtgatttat ggcttcattt tgctgtaatg
      181 gagaattagt ggaaagatta tcagggactc aacactttgg cttgttaccc atgtccagac
      241 gagcaatttg tctccctgaa gcagtgaaat acttgtgaca gctccaacac taattcaatc
      301 aagagaaaat gttggaatta atttgttaca agaaaattta aatatgttca gcaaacagta
      361 accgcagagc agcagctgat ttattgtgct cggcaaggta tcgatccgct tcgatctggc
      421 ccatgttgag gttttaatgt gtaataattt ccaatttaaa gctccttttc aagatcacgg
      481 gtttaaagag agggcaggct gggtctcaag acctgattag gagcctgttg caatggcttt
      541 gtcaaaagcc tgtttgaatg taaattcata gttatctttt gcgctatctt taatattctt
      601 gacatggatt ttattgtgtg tcaaacctca ggccagctgc ctgccacaac cattaatgaa
      661 acatcttagg aaataaatct cagtctttat aca
//
LOCUS       KCPA01001595             782 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 175315tic ultra-conserved element locus
            uce-8040, sequence.
ACCESSION   KCPA01001595
VERSION     KCPA01001595.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 782)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 782)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..782
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="175315tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>782
                     /note="ultra-conserved element locus uce-8040"
BASE COUNT          160 a          243 c          152 g          227 t
ORIGIN      
        1 tgaggcagtg agcctccctc tgtaactcta tgaggaccac atccttcttc tcctgctact
       61 cctcctctta cacctctcac tcatctgttg cccttctcct tccctctctc catctctccc
      121 tccctccttc cctatcttcc cctgcctttt ctctgccccc tccttctcct ctcccttttc
      181 ttctttcctg tcacttagct gtgcctctcc tttccccact tcactgtccc cctctctctc
      241 cctggctgcg ctgggttact aatgtgcagt aatggtatgg ctggaaagtc atttgcgctc
      301 cccttctctt tatttttttc ctgcagtatt attaaaactg ttccatcact ggctgtaatg
      361 ggagcgtctg tattttctcc ctctcccgta tccctgacat gacataatgc ctgccctcac
      421 caagacgcta taacaccgag gtaattgaaa cataactcac cgtaaattac aggccgttgt
      481 tccaggcagg ggcccggcca tgcttcctgg agctcattcc aactggaagc taaacattac
      541 ttgaaaaggg atgcttaagc aaaacaaagc catttaaaga gcaacacaaa cacggagcac
      601 aggactcggg ctctcctgga gaggtggggt cccacctgtg tggcagctgg tgggactgag
      661 cagccagaag gggattgggt gacttcccgt gatctgtgtg ttccaaacca catccttgca
      721 gacacaagtg ttggcatcaa ataagcatct ctgttagcag agagagagca tgctgtgtaa
      781 at
//
LOCUS       KCPA01001596             817 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 175426tic ultra-conserved element locus
            uce-1277, sequence.
ACCESSION   KCPA01001596
VERSION     KCPA01001596.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 817)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 817)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..817
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="175426tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>817
                     /note="ultra-conserved element locus uce-1277"
BASE COUNT          272 a          161 c          156 g          228 t
ORIGIN      
        1 gattgtcaca acagaggcca gcattcgagt ggaagaactc tttcacagga agttggttaa
       61 aattacttcc ctgtaatttc agctgaaggt gttaaccact gaaggcctta tagtacctct
      121 ttccaaactg caagaactgt cacttctatg gtacccgtgt cctcacatta aacaaaacaa
      181 accattgctc ctttcttttt gcttcacagg cacaaggaag caggaaacat tgtgctaaca
      241 tgactacagt attgatgaat aaaaactata acccccaggc taagctgcca aataagtagt
      301 gaattaattt ctgtaaagta ctccaatatt acaaaggtgt gttgaaaggt gtctgctcat
      361 gtttcaaatt aaacgcactg ctggtcagca ttagcacctc agctttgaac agcagccatt
      421 tgcctataac acttcagggg ctgggaaaaa cggatttgcc gttcacactg gaataattag
      481 aacatgtcag gaagaattaa tttcctcatt tttcaaaagg atacacagaa attaccatgt
      541 tattatatga cagggtccct tggagaattg tattaaattt aatttctagc gcagcccaca
      601 caacaaatta aagtcataaa taagatggaa agaagcggga cgcagagcat atgtttatgg
      661 caatgagtga agccaaggga ccagaaacaa ctatcttcat ttcattttat ttaaatcagc
      721 cagacactgt gtatctgaat gacagcactt gttaatggtg ctgagattat aggctcctta
      781 attttaggaa acagaagcag tcactcagta tttgaaa
//
LOCUS       KCPA01001597             586 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 175536tic ultra-conserved element locus
            uce-2455, sequence.
ACCESSION   KCPA01001597
VERSION     KCPA01001597.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 586)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 586)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..586
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="175536tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>586
                     /note="ultra-conserved element locus uce-2455"
BASE COUNT          163 a          109 c          138 g          176 t
ORIGIN      
        1 aggggatgga aagagcaaga cacggccctt tgtgttaatc ccaccgttct gtgcgtgcaa
       61 acgccatcct gtcacctctc tcagagcatt gacaaaggca aggagcacaa gatccacagc
      121 ggagctggaa gctctctttg gaggggaggg gagtccacat ggcttcagag gttgggtgta
      181 tctataattt ctgctatcct gcaagagtca ctagaatatt gtactttccg ctacttcagg
      241 atgttctaat gaaccaatgt ggcaagacta ctggacttaa tttaatggta ctatatatta
      301 atactcctta ttatatcacg cttgcactaa agatggggag tgagcagccc tcttttgagt
      361 gcattgagtt atgaataaag gtggtggaag ggtataattg tattatcaca tgtattccga
      421 atgttaagaa tccaagctac gttgaaatca gcaatccagg gttggtaatg ttggaggaca
      481 cattcatttt taccttgtgg atgcatagtg ctgtaggggt cactgttgta tacagtctgt
      541 tttctatttg ttaataaaaa aatctacagc atcattgcat aattct
//
LOCUS       KCPA01001598             355 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 175643tic ultra-conserved element locus
            uce-5803, sequence.
ACCESSION   KCPA01001598
VERSION     KCPA01001598.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 355)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 355)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="175643tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>355
                     /note="ultra-conserved element locus uce-5803"
BASE COUNT          101 a           71 c           73 g          110 t
ORIGIN      
        1 aagcaaatca gcattttgcc tacggggcac acatttttga cctgtactat tttgtatcag
       61 tttattgcat gccttgactc tgtgctcagg agctgggggt ccataggaga ggatccatgt
      121 gaatgcaacc attagaagca ttgggaaatg ccaaggtaaa catttctttc cctttgaagc
      181 ccccacgcct aactctacga tactattgac tcaagaagta atgctgaaca ctggaagtgt
      241 tcagtcagca ttttaaacta ttatgagcta ccttctgaac cattgccaag ttaatagaca
      301 atgaaagata atgagcttga aattgggtgt taaattgcat ttttggttct ctctt
//
LOCUS       KCPA01001599             220 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 175743tic ultra-conserved element locus
            uce-6021, sequence.
ACCESSION   KCPA01001599
VERSION     KCPA01001599.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 220)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 220)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="175743tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>220
                     /note="ultra-conserved element locus uce-6021"
BASE COUNT           73 a           36 c           35 g           76 t
ORIGIN      
        1 gccctgggat gttctataca gttaaatacc taaattgtaa catcaccgta tcattaggtt
       61 tatctgctga cacaagggat gtaggtaaag aattcattta atttgatagt gtataaagca
      121 cttaaggtac ttgacgattt attgatcaag tagaaatcag ggcatccaac agctactatc
      181 cctattcaca ctattaaata tgaaattaac tttttttttt
//
LOCUS       KCPA01001600             785 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 175959tic ultra-conserved element locus
            uce-186, sequence.
ACCESSION   KCPA01001600
VERSION     KCPA01001600.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 785)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 785)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..785
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="175959tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>785
                     /note="ultra-conserved element locus uce-186"
BASE COUNT          236 a          179 c          134 g          236 t
ORIGIN      
        1 tctgaagcca gtgaaggtac ttcacggatg aatgtgaccc attttatgct tttcaagaac
       61 ctaagtaaca ataaatgtca aatccccatc acatctctaa tgctgttcag aggacagatg
      121 tacaatacct ctttgtcttc ttcctgctca taacgagcag tgtaggtcat ctgcatcatt
      181 aacatttgca gctgatgcat ttctgtagtc tgtatacact tcttggaact gcatagacct
      241 tctcattgtt ttcagaacct tgatttttca tagtattatc atcatccaaa tgtatttaag
      301 gatgaaacta ttagaaacac aattggtgaa ttaatgtcat gaggactgct gctggcagct
      361 catcaatttt tgatatgcca ctcagacaaa tgaaacataa gccacccaga acaaggggac
      421 cttttgacac ttcaaaggaa acccctatgg gtggtttcct cttgaagctg cactaaactg
      481 gctcaatctc ctcagctgga agctgccaat gtctcattaa cccctaaaca ggccctgcat
      541 gagcttttct tttcagctat aattatgcca tgcactcccg ttatgctgta ctgaattgca
      601 acactgtcac cagcacatta taaacatcca ccctaattga aaagcagatt agactcgtgt
      661 taattagtga aaaagcccgc ccacttgcat gcattatgat tgcctcttaa atactgagga
      721 tgttgaaatc cctcagaaag actaggcaga cttaattgca ataacctgca aattaagttt
      781 aattt
//
LOCUS       KCPA01001601             731 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 176070tic ultra-conserved element locus
            uce-7906, sequence.
ACCESSION   KCPA01001601
VERSION     KCPA01001601.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 731)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 731)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..731
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="176070tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>731
                     /note="ultra-conserved element locus uce-7906"
BASE COUNT          216 a          129 c          147 g          239 t
ORIGIN      
        1 tatacagtgt gacaattgct taaagcatgt atttatagaa atgtctttat atacccattc
       61 tttctacaca cattcagact catacataca cattttttgt atgtttgcat ttgtgcacat
      121 atatcataga aaataaaact tgaaggggaa ggcagctggc cagatttaat ttgtcttcct
      181 gtatttagca cttaagggct tatatactca gtttgctcaa aagagtgaag aagtactcct
      241 tgcttatgcc tcaaatcaga aatgcatgaa gtgcagctgc agagataata cattctcccc
      301 aaaggctttg gctgagcaaa ttaggtgtca atggggtgcc tgcgcaggca gtactctctc
      361 taattagtct cttgagccta gttggtggca ggtataagat gatctaatca attggtctgt
      421 gtctgatggt acgtgtaaaa atcctagcag gcagagctgt ctcccacagg tcactcacct
      481 gcacagcagg aacgctcatt ttcatttttc atctcttcca tcacatgatg ctgacagttg
      541 gttttaagga aattgaatcc tatctagttc atagggcatg taggtcaaaa taaagttgca
      601 ttatgggtat tggtgatcca attaattaat atttatagca acaagttgca agtgatatta
      661 tctgagtgca aatagtattg ctaatgtttg gttggctttt taaaatgatt tctttaacaa
      721 aggtaggaac a
//
LOCUS       KCPA01001602             762 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 176179tic ultra-conserved element locus
            uce-938, sequence.
ACCESSION   KCPA01001602
VERSION     KCPA01001602.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 762)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 762)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..762
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="176179tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>762
                     /note="ultra-conserved element locus uce-938"
BASE COUNT          238 a          127 c          163 g          234 t
ORIGIN      
        1 acttatgaag gaaaccacat agatactata cacagacaga ggaaatgggg tagaagcctc
       61 acaagcaact ctttctgcag ccagttcaat ttctgtgtgt ttaagctatg aattagttca
      121 tttatattta cttttatgaa gctgattaac cagagcttct ctatctgatg aaaatcattt
      181 taattgtagt gttaggctcc tgtgtaatat ccattacatt atgaactgtt taaattctac
      241 atgggtattg tgtaaattgg ccctttgtga gctgagaagc aattacgacc aaacagctct
      301 cttttaaatg gctacagaac tttgtggtgt tgttcaggac aatcagaaac aaaggaggct
      361 gtttaattgt aatttaatgg aatatcaagg agtccatggc attagatgct ggcaacagag
      421 agcaggagag aaaaattaac tgcaattatg tttgattaaa gctatccttc tcaataatca
      481 gccatcctga caggccatgg ggctctagtg ggtttcagga tggcaaaagg tgttgagcaa
      541 tattagggcc aataaaggag atattagcat agctaattac agcactgcaa aacctgtaaa
      601 agggacctct gtgtattgta atgtgtgaaa taattggccg aggccattat caattacata
      661 aggaatgaat ttggtttgtc agagaaaagc tgatgagatg catttcattt gacactgctc
      721 ctttccctca cgtttgcgtg tagctaagga cttatcagct tt
//
LOCUS       KCPA01001603             399 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 176286tic ultra-conserved element locus
            uce-3442, sequence.
ACCESSION   KCPA01001603
VERSION     KCPA01001603.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 399)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 399)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="176286tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>399
                     /note="ultra-conserved element locus uce-3442"
BASE COUNT          107 a           89 c           92 g          111 t
ORIGIN      
        1 cgtcccgatg attagctggg tcggtactaa ggaacattag gaattttctg ccgctctgat
       61 tggtaattaa gtgactcgtc tactggccga cagtcctgta tgcttcccca ggcagttgtt
      121 agttcttcga aaaccactcc tgacaaaatg aggtttgccc ttggtacaca gataatgaga
      181 ctcagcttga caggtgtggc gcgattagag cgcggctctg ccgctacagc cactcgtggt
      241 aaacacactc attacaaccc gccggtcccc ggaggcaaag catgtttgac attattaatt
      301 ggcttttctg tataaggagt caaatagatg aaaaggttta tcaagctgaa ataattaatt
      361 ttgcctgaat tcgctgacag ttcagaaaag accatttta
//
LOCUS       KCPA01001604             752 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 176396tic ultra-conserved element locus
            uce-1775, sequence.
ACCESSION   KCPA01001604
VERSION     KCPA01001604.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 752)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 752)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..752
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="176396tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>752
                     /note="ultra-conserved element locus uce-1775"
BASE COUNT          260 a          115 c          130 g          247 t
ORIGIN      
        1 ctttcttcag atgtcattcc tctgcatgca ttcatttctc caaggcttaa gatctaaaat
       61 tcctgtaaca atttggcctg gaaagatgaa tcgcttttaa aacattgtgt tgattgtctt
      121 aattgggaag ggagtaatgg gtttagaata actggaacag tttttaaaca gcttgattac
      181 aaggattatc acacacattg agatagacaa atctagggaa atgagaataa tttctggctt
      241 tcctgggcat gcatttcaag tagagaaatg tagaactaaa agcaaatagc acaacctgtt
      301 ttaatcaaag tagtctagca agaaacaatc aattaaagaa cagtctgatt ctctgtgaca
      361 tcaatgtatg aaaatctgtt agacgccaga ttgtgtctca agacacatat gatgaactga
      421 acaaaatgac ctgctaatag cttttacggg taataaatgc atcatgttat tggtaattct
      481 gcagatggta aatcaagcta atatccaggc tgaaacaagc tacttgttaa atatacttca
      541 aaaatgttcc tccttgtttt tccataattg tgtcacacag aaaaataaga tgattgctac
      601 ttacttttag gcattttaaa ttaagatgtg tttcaacatg cagacatttt aattttcaaa
      661 ttctttagag aactgttgaa gcacagcatt tgtatttaga ttagcagaaa ttgttttata
      721 aaaatgttct cttcatgata taaaagagat tt
//
LOCUS       KCPA01001605             631 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 176505tic ultra-conserved element locus
            uce-956, sequence.
ACCESSION   KCPA01001605
VERSION     KCPA01001605.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 631)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 631)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="176505tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>631
                     /note="ultra-conserved element locus uce-956"
BASE COUNT          172 a          109 c          133 g          217 t
ORIGIN      
        1 aacacccttt ctgtgtttgc agtcatatgt aatttttatc tcttgacctt taaacgtaag
       61 cagcagtaaa atgaagaact atggcagtca tttaacaccc tgcctgtact aactggtttc
      121 tgcctgtgag ccgtggtttt aaattggcta atgcagaata cttgcagagc taataataat
      181 tcagattact tctgtcagct attccggttt catgggtaat ttagtagttg aataaatttt
      241 taaaaaaatt cattcgttcc catgcactgt tatgaatcag tagatggttt accattggca
      301 gcagtaactg taagaagatt taaattgcta ctgaaaagga tttgagtgaa ggtaatgttt
      361 tataatgttc taagccatat gcactacttt caggcctcat cagttttaca ttgattccta
      421 gtgaagtgtt taattgcatc atgaatgcaa tataattcag ttctttttgc taatatggta
      481 tatatctcaa agtgatatac agcactgaca gtgaagactc agggctttct tagggtttta
      541 aaggatgcct gtgtgtgtgt cgcgtgtgtg cacatctgtt gctcgagagc tgctcgctct
      601 ccaggggtgt ctgcgtgggc atcagcaggt a
//
LOCUS       KCPA01001606             686 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 176612tic ultra-conserved element locus
            uce-4713, sequence.
ACCESSION   KCPA01001606
VERSION     KCPA01001606.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 686)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 686)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..686
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="176612tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>686
                     /note="ultra-conserved element locus uce-4713"
BASE COUNT          219 a          151 c           90 g          226 t
ORIGIN      
        1 ttttaagaac agcagcatac ccacgtcaat tacaaatagt tactaatatt gctacattta
       61 aggtataggc atgtaaggtg cccaattatg ctattaacca gcagctctca tatatatata
      121 tacattttta gaaagagaac tcagtctatt taacaattca ctaacaaagc tattccttag
      181 ctcatccctg ccataacctg ctccattcag aaacatatgg gaaaagacat taaataacca
      241 gtgaaaacca tggacttctg gtattagtgc tacacattgc atacccctat tcattattcc
      301 acctcccttg tttaatctat cattaagact cagtgaccct acactaaatt taaagcagat
      361 ccttccttcc tcccatgcct aaattcacat acttttctag ttggggatgc cctcaagtat
      421 tagccactct acagggtttc tctaatctca gctctgaact atgttgtgct atagaagcaa
      481 gaaattgctg gtttacatct ttaactatgg aatcttccac ccccctcctt tacttagtaa
      541 gatggaaatc tttcatgtag aacatattta acttgtttaa aaaattttcc tctatatgat
      601 gtagaataaa agttataaag ttttaaagta ctgcttcccc gaacttgtgt cccacataat
      661 ttcattggaa acaattttaa agcttt
//
LOCUS       KCPA01001607             591 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 176725tic ultra-conserved element locus
            uce-968, sequence.
ACCESSION   KCPA01001607
VERSION     KCPA01001607.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 591)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 591)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="176725tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>591
                     /note="ultra-conserved element locus uce-968"
BASE COUNT          183 a          103 c          146 g          159 t
ORIGIN      
        1 ctgtggaggt tttacagtgg aagatgcaat gctgaaagtg ggtagctgtc cttgtgaaga
       61 aacttcctcc tacagtggag ccatttatca cagcccaaaa tgaaagcatt ccttggacac
      121 aaatgtcttt ttcttccttt gtctgattac tgaggggaaa agtgagaagg aaatgtcaaa
      181 acagtgaaac agtggtgtct agagagcagt cactttggag ctcaaccagc ttttgtgaag
      241 gcctggatga tttgtcaaat ggttgtggca taagtcaagc cctgaggttg aaaggtcttg
      301 acctaaggag tgttgaaatc aggcagtata agcaagaggg ctgctagaag tttcagctgt
      361 agtggagatg aacaatgatg ggtgctggac acaacaaaac ctaatctgca taattcaggt
      421 aaggaatttt attgaatctg acaagtatgt gacaggctga gaaagagaaa agaacatgct
      481 cttgctggga accttcaaag ctcttgttaa ggtatgtgga aataaatgac agctaatctc
      541 ttcactactg taaacaatac cattttacac agggctcacc catgaccttt t
//
LOCUS       KCPA01001608             577 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 176836tic ultra-conserved element locus
            uce-5300, sequence.
ACCESSION   KCPA01001608
VERSION     KCPA01001608.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 577)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 577)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="176836tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>577
                     /note="ultra-conserved element locus uce-5300"
BASE COUNT          150 a          116 c          152 g          159 t
ORIGIN      
        1 cttgtgttct catacttact tctttcagca ctggagtggc agtgttcctg caaattcagt
       61 tcgtgaatct taaagcccaa aagcttcttg tgacaagagg agggaattag tgctcactga
      121 tatgttcagt tcttgctgtg tctgtggctg aaccgtttga tgggtcttcc attaaaaggc
      181 agatcgggag cggcgcagag aaatttcctt actagatgac atttcatcgc aatgtccgat
      241 cgtttggggc aaataaccaa gggaaaggat gggaaaagca agtactcgac cctcagcctg
      301 tttgataagt ataaaggaaa gtcaatagaa gctatcagaa ctacaggtaa gaaacacctc
      361 cagaaagctc cttttgatgg cagaactcat tcagtttatt ggggacacag ctgggttgag
      421 taggtgtctt cattaagacc aaaatgccca tggctgtttg tgctgctgtt attgtggaga
      481 catagaggac agggcagctg ggggctcttg gccctttcat ttaccttgct gcagagtggc
      541 caggtagcaa acttcagggc cttaggctgt tccaggg
//
LOCUS       KCPA01001609             703 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 176920tic ultra-conserved element locus
            uce-527, sequence.
ACCESSION   KCPA01001609
VERSION     KCPA01001609.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 703)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 703)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..703
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="176920tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>703
                     /note="ultra-conserved element locus uce-527"
BASE COUNT          198 a          121 c          122 g          262 t
ORIGIN      
        1 atttttttgc tacctttgaa ttgtagttca gtttttttgt cattaatttt aggttttatg
       61 aaaatgtgca tttgtatgtt cacatttctg cacttgtcag ttttgcatac tgaagcagtt
      121 atttctttaa acttttattt attgcagttg ttcatttttt atgtagtata tttttaaatg
      181 ttaaagaatg acacattttg ggtaattttc ctcagtctta aaaaaaaaat caataagcca
      241 ttttagtctc tatctatcaa agttgtttca tacttgtcta ttttaaagca ggactgcaat
      301 actttaatag gattgagaga gctatttgaa atgtatgcca atgattcctg tcatttcatg
      361 gcagccctgc catggttcac tgagccccct cttttctctt gtcagctcaa ctgaagacaa
      421 gcatttagtt gcaaacttta agcaggttgt gcaaaacaga aatgatgtga ctgcttctct
      481 tcctgcacaa taatgtcact gctggtcaat gtgagaaggt caggttgctc cttgtaaagc
      541 tacatgatac cacttgccta tttgaacaag ttaagttaac cactgaatct ggtccctgca
      601 ggcgctgaaa actcaccctt ttatcaagtc tgcatttcat aagaaagaac aacaattgtg
      661 gagggaggat ttctgatgat atgtttatat actttataag gac
//
LOCUS       KCPA01001610             681 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 177126tic ultra-conserved element locus
            uce-6617, sequence.
ACCESSION   KCPA01001610
VERSION     KCPA01001610.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 681)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 681)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="177126tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>681
                     /note="ultra-conserved element locus uce-6617"
BASE COUNT          210 a          110 c          120 g          241 t
ORIGIN      
        1 tgcctatttt atggtttttc tttattgaag cttgttattt tgtgtatgac agcagcattg
       61 taattttcaa aaagaatttt ttctaaagag tttcttgtaa cacagaagaa ttgaggtgat
      121 cagaagatga attctatttt aacatccaca aactggagga tatcaacaaa gattagctga
      181 ataaagaaat aatctatgac agtgttgaga acgattctca gaattttaaa tacttgttaa
      241 aggctttgct gtatttcact tcaataaaca tcatgctcca gttactactt gaaaccatag
      301 gggcattatc ctgtgcagca cttatcaata ttttaacacg tgaaagtcaa atgatgttga
      361 aacattgaac tatatttcca tctgtgcaag ctaaaatggt acaaatgcat cctgtgtaat
      421 ggaatactac atccccagtt actttcttac aagtgatacc tgattcctct gtattttctg
      481 tggttgtttc cattgctctg atggtgccca aaggaagact gtcttttaaa attaatgttt
      541 atagcattta aggagtttta agccaacctg tcttaaatcc agagaaacaa attcttggaa
      601 attttttctg ttgcccttcg gtgttaaatc tttctgcatt ttgtgtgaaa atgggattgg
      661 taccaaaaga ccctgggatt g
//
LOCUS       KCPA01001611             532 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 177235tic ultra-conserved element locus
            uce-1187, sequence.
ACCESSION   KCPA01001611
VERSION     KCPA01001611.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 532)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 532)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="177235tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>532
                     /note="ultra-conserved element locus uce-1187"
BASE COUNT          163 a          117 c          108 g          144 t
ORIGIN      
        1 tttttaaacc aataatgcta tacaattgca agccagataa tattttattt cagaaaacct
       61 gctagctaca taatttaaaa gtccacaaat cagttgcaat ttagtgctta ttaatccttc
      121 ttaggatgta attcggtgaa agaactgctt taaaaaaatt cttttctgta ttatagacgg
      181 atctaacaac gcagtctggg ctccgtgcca aaggctggta tttcacagca gcgaccgcct
      241 tacagatgag ctgtgggaag caggagggag actctcttag ggtgccacta ctatggagac
      301 acagctgggc tgaacaagat ttgcttcaaa cgacaacaag agagacagaa agagtctggt
      361 tcgaccgctg cccaagcagg cagtaaccag aagagctagc agccaatccg gccatgctgc
      421 actgttcgaa accagctcta catcccagcc aatcagtgac atcactggtg agaaactcat
      481 ttacatcatg cagtaatgaa ctttgtttaa cgtagccttt tttcttttct tt
//
LOCUS       KCPA01001612             463 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 177340tic ultra-conserved element locus
            uce-4421, sequence.
ACCESSION   KCPA01001612
VERSION     KCPA01001612.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 463)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 463)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="177340tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>463
                     /note="ultra-conserved element locus uce-4421"
BASE COUNT          146 a           86 c           87 g          144 t
ORIGIN      
        1 aagcattgct ttatgagtta tgtaaagttt atgctttttc atttatgctt tagaatttta
       61 accacattgt ctcacttatg cataatccat caacccaggt gacaaatagt cttctatatt
      121 tacacactaa gaatatacaa ggagcatagt gtattagcag ctgaaactac aaacgccact
      181 gtcaatcaaa ttggctagca taggaccata tttcttgtca ccaagaggct taaagcaaag
      241 aatctgtgcc taattctctt aaaccttgca ggtcaaaagg ttttaaaatt atttttgaca
      301 ccatttcttt gctttgtcaa caggcctgag tactttttaa catgtaaagg atatcaaaaa
      361 gctgtgcatc ggaacagtcc ggcattagca gtttatgggt ttaagagtgc acagtaattc
      421 cactggtaca acagcaggct gttctggagt gagaggacgg aga
//
LOCUS       KCPA01001613             489 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 177447tic ultra-conserved element locus
            uce-4575, sequence.
ACCESSION   KCPA01001613
VERSION     KCPA01001613.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 489)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 489)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="177447tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>489
                     /note="ultra-conserved element locus uce-4575"
BASE COUNT          140 a          118 c          114 g          117 t
ORIGIN      
        1 tgcacagcaa cattcccctg cccacccaca catgctttaa atccccccgg agcccttcca
       61 aaaggactgc cctgggaggc agggcctccc cagtgctgta gctcatcacc aggcgctcac
      121 ccatgcagct tggtcattta tccctcccgt ttccgtctca gatggtaatg agtggtttgc
      181 actgggaact aaatgaagtt gattgcccac tggtgtctgc cattagtggt aattagttaa
      241 aacatcagag tataaacagt aaattggctc taataattaa tactagcact caagcatatg
      301 agagacacag agactgaaag agaatcagcg gcaagcttgt aaaatcagct ggggctgctt
      361 taattaaaaa agaaggaatg taagtaacac agtattggaa aaaggacaaa agccatcagg
      421 atcttgcttg gagtgtggtt gtgtctcctc tggagtgcag cagggctgag gactcacctt
      481 ccctgacat
//
LOCUS       KCPA01001614             549 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 177556tic ultra-conserved element locus
            uce-3113, sequence.
ACCESSION   KCPA01001614
VERSION     KCPA01001614.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 549)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 549)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="177556tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>549
                     /note="ultra-conserved element locus uce-3113"
BASE COUNT          154 a          112 c          122 g          161 t
ORIGIN      
        1 cttcctcgtc ttttgctgtc ggcaagtttg gagggaggat tttacctcca ggaactgctg
       61 ctttgcaacc tgtagagata agacagcctc gcatcagatg atcacagaga taagtaatct
      121 ctcccctcgg ccagtggtat agctgaccgt atgctcttga atcttagagc gctaagtctt
      181 tcctgtgaat gaacgagaaa acactcgaca ggtcgtgaat aatcgtttta atgagtgtgt
      241 aaaagcgtgc gacggggtgc acggagctgt cgggttaaac aaacaacttg taccctgacg
      301 aaatccgatt gttaaagtgc aaagtggtgt cagtccaatt tccatcccag ttctaaaaac
      361 cacagatcta agtcgcggga gtccaatttt ccccattaag aaaaataaca atatttttaa
      421 gtgcgatcgt agaccagttg agtatcagag gtaccgaagc tattttgtta tttttaaaga
      481 cgatagtttt agacattttc ctagatatta tcagatcaat gcggtaaata ttttcctgtg
      541 tgtccttcg
//
LOCUS       KCPA01001615             787 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 177670tic ultra-conserved element locus
            uce-2816, sequence.
ACCESSION   KCPA01001615
VERSION     KCPA01001615.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 787)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 787)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..787
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="177670tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>787
                     /note="ultra-conserved element locus uce-2816"
BASE COUNT          233 a          162 c          166 g          226 t
ORIGIN      
        1 tgggaatttg atgctaggtc tatacttctg gctcaagccc agctgtctac atttggaaat
       61 gtatttgttt tggaacacaa ttttctggaa tagaatgtca agaaaataca taatcaagag
      121 ggcatcatag ataacgagct acaaaaacct gtttgtcacc ctcctcccac aatggcgaag
      181 agccttctac agctgctaat tagaaaatta gaacaccaca aatagattat attttactgg
      241 cagcatagcg ccccccagtg ttttgaagta ctttctgaat tgtttgctgt cagcaaaaca
      301 agtgcgctac ctgcaatcct atagacaaca aagcccggca gcaggatttc agtcaggtga
      361 tgtcacccag gtaaaattgt actgacaagc ttttaattaa agttttccca cacatctttc
      421 tgctggtccc caggagctat tattcattat gtgccgactg tcagccaatt gtgagtcggg
      481 agggaagtgt tttattttca aagcccttgc tgacagctag agaacacttt gttatacaat
      541 ctgtttactt ttttcacaca cacaatcttg ctaaagggga aatggtcatg cagtagtgtt
      601 tacagtttat ggcaataatt aaatgcatct ggcagagcag tagctgaaag gaggtcggtg
      661 tgggtgtaaa agccataaaa ttcctcctat aaacagttac cttcaccttg cagagcccct
      721 agcattttaa gacaaagttt ctttgggaaa gggcaggtct gaacaggtgc acacgttctg
      781 aaatggg
//
LOCUS       KCPA01001616             657 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 177780tic ultra-conserved element locus
            uce-3469, sequence.
ACCESSION   KCPA01001616
VERSION     KCPA01001616.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 657)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 657)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..657
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="177780tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>657
                     /note="ultra-conserved element locus uce-3469"
BASE COUNT          220 a          115 c          107 g          215 t
ORIGIN      
        1 actgaaacat tttaattgta ctggatgtca tgttaacttg cataaaatag caaagcagat
       61 aatatttcat tggagatgtc tataaaatat tgggctttct tttttaaagt tagtagccta
      121 tggctactga aataaaatct tcaagtaata acaggtaaga tttctggcct catgtatatt
      181 tccaaagtca ctaatggata gtaaattgaa agttatatct tcagcccttt ataaagaaag
      241 cacctcacta atactgtaat cattctgcaa gcctaacaac agaggaaatc atgccataac
      301 aaatactctg ttactaatgg caacattgat ttctgcaatc agccattaag tctagaaaat
      361 gaaagacagt ttgaggtacc ttaaggcatt acattgccca ctgttaaaga gctggtagca
      421 ggctgttgag ggtaattctt tttagccccc ccactttcga taaatatttt agtattggag
      481 gcaattcagt gttacagtta ttaagtatat gccagtttac ttttgttgtt cttgtcatgc
      541 tccagtatac tctacttctg aggccaaatt aatataaaaa cggtattagt ttgcttatta
      601 caaaccagta aagaaattgt taagacacat aaatctgcac tccacattcc acagatt
//
LOCUS       KCPA01001617             579 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 177890tic ultra-conserved element locus
            uce-2235, sequence.
ACCESSION   KCPA01001617
VERSION     KCPA01001617.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 579)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 579)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="177890tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>579
                     /note="ultra-conserved element locus uce-2235"
BASE COUNT          207 a           92 c          104 g          176 t
ORIGIN      
        1 taagccacat aatggaaagc acgtaaaact gattttaggt agaatatagc ggcaaataat
       61 cctaccaagt actgcattaa aaacaatatt cagtataaag tgattgtata gagagcctga
      121 ttgtaaagca agattaatac caaaggcaag aagtctgcaa taaaacctcc taacttaaat
      181 catctgaatt tgtgtacaag cattcatatt tagcaacagt cccaaggctg agattaaagc
      241 tgtttggtag gttacttcaa ggccttttta ttgctaaatc ttattatgtc tctaaaatgt
      301 agaaattaat cacctgtcat caaagctaca gtggattatt gacttctaaa tgtctctacg
      361 aagtgattca tgacagaatg aaacaggaga ctgaactagc actgaaattc tttttgcatg
      421 tgataaaaag ggtctattaa aagtgtttga acaaatgctg gctattaggt aatcatcaca
      481 aaggattttg ttatcaaaat gtggtgctcc ttgaataacc ttattcagtt acataaccct
      541 aatggggaag atacctggag aatttagatt gttcatcta
//
LOCUS       KCPA01001618             715 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 177998tic ultra-conserved element locus
            uce-4302, sequence.
ACCESSION   KCPA01001618
VERSION     KCPA01001618.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 715)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 715)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..715
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="177998tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>715
                     /note="ultra-conserved element locus uce-4302"
BASE COUNT          214 a          156 c          124 g          221 t
ORIGIN      
        1 agaaaacaag aatcattcaa aaattatgtg ccaggcagcc tgtattaata tttatgttga
       61 cattaatatt gataagaatg caccttatgc tttgttgtct atccccagca tcttaagtct
      121 cctgttattc agctagtagc cattacctcg catctccctc tgtacacaaa gcttcaaaca
      181 gccttggcag ggctccagct cacttacgct taaatggaca ctcaagcttc gatggacaca
      241 cagctaaata gaggccaata attcaataca gtatgactgt actggggctt ctagtaaatc
      301 catcaggcag taaatatcat ctgaagccaa tgcaagcttt tatctttcca attttgtgta
      361 tgtctgtgtg aagcccaagc attcagtgaa tcatgtaatt tattctgcag tgcagagcct
      421 gggctgtctc agacatcata gtgacttttt ttccatctgt caggggcagt cactgctacg
      481 cttttgtgca aacgcatcac attgcattta tttatttaag cgcaattggg caaggacaca
      541 tttttgcaga tcaacaaata ctaagaaaag catctgaata tcattacaac agcatgttaa
      601 acatttgtcc taaccagttt gttaaatcag caaatgcact tccagcaaat gcttgtaatg
      661 gctcagaaaa ggctccctaa tgttttatta agcctcaaat atgccctgtt atttt
//
LOCUS       KCPA01001619             576 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 178110tic ultra-conserved element locus
            uce-7329, sequence.
ACCESSION   KCPA01001619
VERSION     KCPA01001619.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 576)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 576)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="178110tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>576
                     /note="ultra-conserved element locus uce-7329"
BASE COUNT          165 a          121 c          128 g          162 t
ORIGIN      
        1 ctttcagaga aagacatgag catgctggag gaaagaataa agcggtcagc caagagaccc
       61 tcttctgctc cagtgagaca ggcagaggag aaacctcagc gtactcagaa cgtcagcgcc
      121 aacgccagca tgatgcgcaa gggacaagct gaggacatgt cctccaaact caagtatgta
      181 atgtatggtc tcttatgtct gacaatgtca ttttagttct tgctttgcat gtgaaaaatg
      241 gccaaataat ataaatctaa atgtctgaat gtcttgtctg tcttgtttct aaatggtctt
      301 gtgccttttt tcactgcttc tccatggaca gaattatgta tcgcacttat aggatgtaag
      361 tactgcccac taactccttg gtagcacggc tcttgtatct tctatcctag ccatgacttc
      421 ctgagggtga tgggtttgcc atggctatcc aggttattta tcaagctgca gacttaagca
      481 actgttcaaa acattgggag aaggaccctg ttctagttgt tatacataaa gcacagaaag
      541 catgtgtgaa ttgtagagcc taaacaaaaa gctcag
//
LOCUS       KCPA01001620             359 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 178222tic ultra-conserved element locus
            uce-5193, sequence.
ACCESSION   KCPA01001620
VERSION     KCPA01001620.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 359)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 359)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="178222tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>359
                     /note="ultra-conserved element locus uce-5193"
BASE COUNT          102 a           71 c          113 g           73 t
ORIGIN      
        1 aaatgtgtag tgacaggaga tgttgtggtc cttacacagc tagcagggag tggagcagga
       61 gagaggacag tgctgtacag ctgcagggct gctcacaaca gggcagagct cccagagaat
      121 gtgctctttg ttccctgcct ttaaagggta agagaaacac ttatgcatgg caaattagcc
      181 caaaaatgta tttctctaaa acacccgatt gtctggccag ctctgcagct gcagggaagt
      241 tccagggaga gaagggggag gcggcaggga ggcagggaag gaggatattg atggcttgat
      301 tgtgcgaatg agggagaaat tctcatgcca ccattcaaac agagctgacc agtgagcca
//
LOCUS       KCPA01001621             497 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 178331tic ultra-conserved element locus
            uce-5730, sequence.
ACCESSION   KCPA01001621
VERSION     KCPA01001621.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 497)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 497)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="178331tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>497
                     /note="ultra-conserved element locus uce-5730"
BASE COUNT          146 a          121 c           93 g          137 t
ORIGIN      
        1 catgacaatt gttaaccagg cagtcttgtc ttacatttga cagttccagc tctggcacac
       61 taagctcttg tttgataagc tacattcatt ccatatttgt gtaataccct ggaagaaatt
      121 aggttgcaat gaagtccatt tttgtcactg catgcagcaa tgaatatcac acccagcagg
      181 gtacagtggc acctggctgt ccagacccag tgtagcacaa agccatctgg gggtaattac
      241 aacaaggtat tctttaaaga ccagatggga ccaaggaaca gaagccccta cccctcccag
      301 tcatttacaa cataattcct ttcaatgata tacttaatcc tcccaccagc tacgcttttc
      361 agcttgctgt tgtcactgtt cctttatgtt aattcacttg agagacatag aaaggagagc
      421 gagccaccgg tgcctcaagg ggctaaaaga aattattcat ccttaaattg tttccactac
      481 accaagtaca gtaacag
//
LOCUS       KCPA01001622             699 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 178442tic ultra-conserved element locus
            uce-7510, sequence.
ACCESSION   KCPA01001622
VERSION     KCPA01001622.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 699)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 699)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..699
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="178442tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>699
                     /note="ultra-conserved element locus uce-7510"
BASE COUNT          231 a          159 c          112 g          197 t
ORIGIN      
        1 ctctcaagta gcaagtgtag catacacaac aacctcaatg agagaggcaa ttaacaaaaa
       61 ataattatat ataaagatgg tttgaaagac aatactctat ctaaaatgac ctcgctgcat
      121 tcacagctcc gataaaacag ttttccttta aaaaatgccg ctttttttat tcatcaaaag
      181 agaaaagccc caaggtcacc tgtcaataac agaacaaacc ctcagtaaat cacagtgctt
      241 cacaaataaa ttcctcatca gtaattaaaa ccaggcctct ctggccctgt gttatcagct
      301 catcaaattc attgctcatc tagaataaca gatccacatc tgcagtcatt acagcatgcc
      361 agataaatca atcctctcaa tgatgctttg agccatctct gctccctttt aaccagcccg
      421 atatttattt ccccctgaca cttctgacat tctatttact gtaggcaaat ggaactcata
      481 cggcaccttg taatggcttt accaaacccc attgtggggc atatcttcca agactgatgg
      541 gcgcaataaa caaggtttta tggtgtaagt gtgagcttcc ccaggaattt gacttctgca
      601 gtgaagatgg tttattacat ttgattgcag gtggaaaaag ctatatccac tttgagacct
      661 gtcagctaaa agcaagtaga aaactttcga aataatatt
//
LOCUS       KCPA01001623             586 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 178553tic ultra-conserved element locus
            uce-7774, sequence.
ACCESSION   KCPA01001623
VERSION     KCPA01001623.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 586)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 586)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..586
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="178553tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>586
                     /note="ultra-conserved element locus uce-7774"
BASE COUNT          146 a          138 c          115 g          187 t
ORIGIN      
        1 ttttcattgc tttcctgggc tcctccatgg cgctgcctca aattggaagt ggctgtcagg
       61 tgaaataaga aatgcgcgtg gggcttcccc ttagcgctcc ttcgaccttc agcataatct
      121 tgggtccccc cacaaacact gctaactact aactcataaa acatatcagc tgggtttatt
      181 acttttaacc atctttccaa ttgtgctata aaataaaggc agatgccatt ttaagatctt
      241 attattatca agggccagct cctccagcag cacctgctta gcagcaatct gcttgtttat
      301 agtccctttt ttataggtga cagtttaagg tggctgttct cctgttacaa agagttcttt
      361 ttaatgtggc agaagtggca cgcacagtag gtgagctcct ttctttcatc cagtgatatt
      421 gagacggggt cgcaggttca cctgtgattt ttgcttgaca gcttcgccac acacatcagg
      481 ctctgccaaa tgctccgcca ttaatttatg atttaaagta attaactttt gctgattaaa
      541 gtaattattt caagtgcatt gcactcaggc ccaaatgatg ctcaca
//
LOCUS       KCPA01001624             674 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 178662tic ultra-conserved element locus
            uce-5349, sequence.
ACCESSION   KCPA01001624
VERSION     KCPA01001624.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 674)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 674)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="178662tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>674
                     /note="ultra-conserved element locus uce-5349"
BASE COUNT          213 a          134 c          134 g          193 t
ORIGIN      
        1 taatttgtgt aagtgaaatt attttctaag ttaaacaact cattacctct cagcagacat
       61 atgaactgag aaataaacac ctccaggatt cccatcaacc cacaacatgg gcagagcgaa
      121 tgctaaaata ttactgaagt caagcatttc ttttcatttt ggtcagttaa atatctatat
      181 ttggttgggg gtaaggggga gatgagggaa aggtctcagt gaccagctca gataatatac
      241 ttatgaagct atgtctggaa ttcctacgtt ggtacctatg acactatcaa attcattgga
      301 aagagtttat cgcaaagtta aatgtcagca gctgcaagcc tttaaatgga acatacttca
      361 gctcctgggc aatggcagcg atctgttcca ccctgtcctg gtgagcagcc aaatcgctct
      421 caaaagcttc atgtttcctt aacatggcac ggacttctgt cagagaggca gactcataat
      481 ccttctgaag caaagtctgc tctttgcctg aaagaggaaa tgaatttact tgttagaaaa
      541 ttgtaaattt aatcaattaa atcccctccc actgaaatca gcagcaaatt gtcagcttgg
      601 aaacatattt tcaagctctg cataggctgc ttatacaggt ctaaaatagc gagtacatta
      661 ttggagaagc tgga
//
LOCUS       KCPA01001625             361 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 178766tic ultra-conserved element locus
            uce-4594, sequence.
ACCESSION   KCPA01001625
VERSION     KCPA01001625.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 361)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 361)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="178766tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>361
                     /note="ultra-conserved element locus uce-4594"
BASE COUNT          117 a           60 c           60 g          124 t
ORIGIN      
        1 aaaaatatgt ttgtttttgc tgcctaataa ttcacagctt tgaggagaag ttaatatcct
       61 ttaagtaaaa gactaatatc tatctctgga agtgcttttt ttgacccatc tggtttgtca
      121 gaaaagtctc ctacctctga tatttataca atatcatgca aatgtcaaaa tctgaatgtc
      181 atcttcaaag acccttttat gtcaggcaac ccctttatag ggaaaaaata aacaatttta
      241 tgtatggatg ccagtccaat taataaaagc cttttttgct atgcttggct acaagcaagt
      301 ttctcttttg aaaatgaaca gagggagaat gagataaaag gtctgtattg tttccttgca
      361 a
//
LOCUS       KCPA01001626             521 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 178874tic ultra-conserved element locus
            uce-1675, sequence.
ACCESSION   KCPA01001626
VERSION     KCPA01001626.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 521)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 521)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..521
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="178874tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>521
                     /note="ultra-conserved element locus uce-1675"
BASE COUNT          164 a           95 c          107 g          155 t
ORIGIN      
        1 aggggaaagc cacgagggac ttccctggga atgaaaagag acacagaaag gttactacac
       61 atatcctaga gtctggtaca taattccacc gttaaaactt taatttatga aaaacatgct
      121 ggtgcggtcc ccaaatggtt aaattccact caaacttttc attttagtta gtcatgaata
      181 tatctaacat acagaggcca tcagcatctc gccactagag actataaagt ctacttacat
      241 agggttcctg ggatttttca tgttcttatg gaaaatatct ctgaaatccc cgagctgaaa
      301 attttgatct catttgtgga tgtgagtgat gctgagaaag ggttgaagag tgaagagaac
      361 acttttctcg cataatttca tttgtcagga gaatcttgcc gctgacattg gaagagtgat
      421 ttaattgatt ttaatcatac acctgagatt gggaaattga gccctctgtc ctgaaaaata
      481 attccaggct tccatgagaa tgtctaattt gcagctaata g
//
LOCUS       KCPA01001627             629 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 178986tic ultra-conserved element locus
            uce-291, sequence.
ACCESSION   KCPA01001627
VERSION     KCPA01001627.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 629)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 629)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..629
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="178986tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>629
                     /note="ultra-conserved element locus uce-291"
BASE COUNT          174 a          129 c          124 g          202 t
ORIGIN      
        1 ccagcgccga aattcctcac agctctccag gcctgatgga gacacataat gaaatacaat
       61 cctgtcaagc tcagcccctg ggtaacattt tcacttctac attccatttt cagtttaggt
      121 cgagattttt aagaagacag caagcagcac tccagtccca ggtgacaaga tctgctcaga
      181 tttagtcttt gaatgttgca aattaaattc cctcatcagg cctctaatca ctcttaccag
      241 atggggcttg tgctcaattt tggatccaca ggaaatttaa tggttattgt ttctgtttaa
      301 ataggagatt attgcatttt aataagttct ctttgggact tgcagcaaca atagagcact
      361 atgaattact gtagatagct gttactgcat gctggggaaa aatcaagtta ctaagtgtga
      421 caagttgctt tttcttccct tccagcaatc gctcggagtg tatttaccac caaattaagt
      481 atgtgccgtg gggataatat ttttatcctg ccgagggggg aaggcgcttg tctgtggatt
      541 ttcattaaaa tgacacatct gttcagcaat ttcacaaagt aattctgctg aaagttttat
      601 cagctaattt taattattca ctccagtgg
//
LOCUS       KCPA01001628             659 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 179096tic ultra-conserved element locus
            uce-7249, sequence.
ACCESSION   KCPA01001628
VERSION     KCPA01001628.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 659)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 659)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..659
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="179096tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>659
                     /note="ultra-conserved element locus uce-7249"
BASE COUNT          232 a          139 c           91 g          197 t
ORIGIN      
        1 atgtcagaga gaattatttt ttcatctaaa atgactcaca ttgctatatt cacagaaaca
       61 gactataaaa tgctacatta gtctaagtct gatgtcttat ctaattgacc tttaaagtga
      121 catcttccat cacacagact aacccgtgct atttatttcc atcttaccta aaattatgat
      181 gaatggtttg agcactattc aattattgaa aatgtgcaaa gaaacagaaa caatgaaact
      241 ggcaaagtgc tctgcattct taggaacaat ttaggctaat tagcatcaac ttctccccca
      301 ttcatcatac ccctttagaa atataaacaa actgtcagct ctaacctaac aaacagatca
      361 ctgagctact taacacaaat tattcttaca tgaaaagctc cttctcaggc aatattctcc
      421 tctagggcat ctgggaagtt gagctattaa aattgaagac atatgtttca gtcaaattca
      481 actcccagat tgtactgatc gctgttgtga cagttttcca tcagcagctg gcaaagcact
      541 acgtatttta aacaaagaaa tgcaacaata gacttcaatg atgcatgctc atttagtaaa
      601 atatcaatac cacccaatta gcaccctaca cctagaaatg gagctactta aaattattg
//
LOCUS       KCPA01001629             643 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 179205tic ultra-conserved element locus
            uce-1520, sequence.
ACCESSION   KCPA01001629
VERSION     KCPA01001629.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 643)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 643)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..643
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="179205tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>643
                     /note="ultra-conserved element locus uce-1520"
BASE COUNT          221 a          108 c          113 g          201 t
ORIGIN      
        1 agaatcctct ggtggattca aattatatat acagactttc aatttatatt ttgtcatttt
       61 cactgtgctt caaacaatga ttcataccta aaattaaaat acattttcat aaaaagggca
      121 caaattattg ataaacacat ccatgtttgc agattggtta tttctcagag gttatttggg
      181 gtcataattg taaatctcat taccttgctt gaaggagaag gtctctttca ttattatggc
      241 gctgaggtcc atatccctga agctaattgc aaggtattgc tccagagttc taattgtttg
      301 ccatcaaaat agctgtgtaa gcttgattaa cagtgttcag caacattcat aatagtccaa
      361 gcctggtcct gcataaaata gaaactggga aaaaatcaat aagatttaat aagatcagga
      421 acaatcactt acaatagtac atcaatcaca caaagtaata ggtgcaggat ttgatagggt
      481 cctgaactgc ctgagagatt cataaccagt actcgttaat gatttgttca tttgcatttt
      541 atcaatccag ctacagctga caagcagaag gagcagtagg gaaatatgtt gacttaaact
      601 catcagagtt tgcaattcag ataacttaat aggaaaatca gaa
//
LOCUS       KCPA01001630             697 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 179313tic ultra-conserved element locus
            uce-1410, sequence.
ACCESSION   KCPA01001630
VERSION     KCPA01001630.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 697)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 697)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..697
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="179313tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>697
                     /note="ultra-conserved element locus uce-1410"
BASE COUNT          212 a          157 c          123 g          205 t
ORIGIN      
        1 aacatcgcat taactcagcc ttttttgtca aaaatactga ccttaattta agtgttttag
       61 catgttacaa ctcataaaag aatatctgac tttataaacc tactcaaagc cttttactga
      121 agagggaatt cttggtttct gtgaaattga tagatttaat gaatatattc ctgttataat
      181 atgacatctc atttttctct ctcataaata cttgtcaggt ttatgatttt tcactcattg
      241 gccaggaatt gtgttgcaca agctcagatt gtgggtgctc ataccaagtt taatttcact
      301 cacaagtaga gttgacaaaa gatcacagtc actaagccct ggaattaccc tagatattgc
      361 cctctgtgct ctgcaaatga aatcctacag aagacccttt ggaaaagaag aacacgatgg
      421 ttaactctca gaaatccatt ttgcacaggg cagtgtcagt acacagagaa gcactgaatg
      481 acaggcagat ttgccagctc ctggatgagc gaagtcggaa gctcagcatt acactcttgc
      541 tgtctgtcca tctcaggctg ttcctttccc actttccctt gttcctctct catgccctta
      601 ccgggtcaga taagaaatta tgaacagtga aatcagaacc agaccgcacc tgtccccagc
      661 acagccagaa cagaactgaa ataatgcact tacgaaa
//
LOCUS       KCPA01001631             706 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 179426tic ultra-conserved element locus
            uce-7503, sequence.
ACCESSION   KCPA01001631
VERSION     KCPA01001631.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 706)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 706)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..706
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="179426tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>706
                     /note="ultra-conserved element locus uce-7503"
BASE COUNT          219 a          138 c          115 g          234 t
ORIGIN      
        1 agagtattta tttaggtcat cagccaaagt ttttccgctg ttttaaatag cttcacaaat
       61 tgaaggaagc atttaaaaag aaggtaataa tgtttcccta ttcttgcttc aggcacataa
      121 atgttatttc ctctgaaatg tcatgtattg accatctgaa tcttgataaa tcagaagata
      181 gattgcagtg gagctctatg tatttaagta tcaagctgat ccataacttt cacagcaacc
      241 aaaagccatt tcttgtcagt gctgtccaga atatatcctg acagttcagt gggagtttca
      301 gtaccattta ttttcaaatc aatactcaat tactaagagg aagattcact cccttgccca
      361 ttttcaagat gaaattatgg actagagcaa taacacttag tcaaggcaag ccactgtcca
      421 ttaactcatg atgctaccaa aaagccatcc agacacttta ttaaagctca gtcttttttc
      481 agcttttaat taatcattgt gaaaaaggcc tttcacattg tgactgatga ccagagaaaa
      541 caattttctc ctaactgcct tttaatttca actctgggag tgctcattga ctgaatctca
      601 caacaaccca tcaatgctag tttttaatgt gttttctcct ttgttattga gaagaatgga
      661 gtggcaatga ggctttgtgc tcctcttcat aactcaagta attgat
//
LOCUS       KCPA01001632             599 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 179536tic ultra-conserved element locus
            uce-3129, sequence.
ACCESSION   KCPA01001632
VERSION     KCPA01001632.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 599)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 599)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..599
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="179536tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>599
                     /note="ultra-conserved element locus uce-3129"
BASE COUNT          177 a          119 c          133 g          170 t
ORIGIN      
        1 atgaaattga atagttgtaa gcgatccttt aagtgtcccc atttgaccaa ctttgagagg
       61 cagcagcttc ctgagagagt tgaagcaatg tttgccaatc cttgtaaagc atttcacctc
      121 ttcagaggct aaagcctctc aaaaccaaga acaattaaag cgagagcctt tcagagcaac
      181 tggggaattc agcaaaataa atcagaaatc ctctgccgtg gctctggagg cttgcctcat
      241 tataagagca gatctattag cccccttgcc attgtctttc atttctcaag tgaggtgatt
      301 ctaattaaat taatctgcat gtcaatctat cggtgatcaa tcaaaagggc tgaggtcccc
      361 ctttgcggca ctgtgcttgc ggctgacagg ggctgataat ggaggaagaa ataaactgtc
      421 gagcaaagtt aattagtcaa cataataggt ggattaaaca ggagctgctg attgctgttt
      481 cacatgtcga agcatgaggt gggagctgaa actgcaatta acagacaatt attatatttg
      541 cttgtaagag gtcgcatgaa taaacatatc tctgtgggtt tcagtcttta atccctttc
//
LOCUS       KCPA01001633             711 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 179644tic ultra-conserved element locus
            uce-5694, sequence.
ACCESSION   KCPA01001633
VERSION     KCPA01001633.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 711)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 711)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..711
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="179644tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>711
                     /note="ultra-conserved element locus uce-5694"
BASE COUNT          211 a          157 c          141 g          202 t
ORIGIN      
        1 ttctgctcag atccctctcg aaaaattgtc ctcccctcag cagtgccaca gattccaccc
       61 tttcgcagtc gtcaaacctg cacatctcag ctaggcaggc tttggaagca gatgggaagt
      121 aaaagggtaa aaaaaaacaa gagggctcca ggatcctgct ccagtcctgc tgaaatttgt
      181 tcttaaaggt gcaggtcctg tacgatcttt tcagaataac tgacaagaac aaagcctaca
      241 attattaacc tttccacttg ttcccatagt ttattgtgac aagacaatgc aataagcttg
      301 aaggtaatca aaaagcaatt ttgtagtagt gagcttaaaa tgacaaacct ttccttttct
      361 aaataaatca ccattattcc cacatggtcc atacttgaca agtttgtttc cttagtaaca
      421 gagtacttaa acagggtttg tgagtaaaga ttataccttt agccacagaa gtgaaagagg
      481 agacaacagg aaaaaaattg gtccacccac ctgagtgtga tttcaatgtt tgcaacccaa
      541 ggctgtgcag aagcccaggg atgccccttc cctctgtgca ttttgtggac tttctggagt
      601 gtgtggactc agaggggttt tcaaccttca gtgcctaaac tgaatgtaac actccctgat
      661 gtttgttcaa tagctcacct aatgttgagg tcagctgtct tataaattat t
//
LOCUS       KCPA01001634             337 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 179752tic ultra-conserved element locus
            uce-1680, sequence.
ACCESSION   KCPA01001634
VERSION     KCPA01001634.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 337)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 337)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="179752tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>337
                     /note="ultra-conserved element locus uce-1680"
BASE COUNT           97 a           68 c           66 g          106 t
ORIGIN      
        1 tcttacatat ccatgatcaa aaatgagcgc ctgatggcct gaaggttgaa ataattatct
       61 ctggtggccg tgcagatctc aatgtcaaag ctaagaacca cagggcagca gaattaaagc
      121 atgaaaactg gcatgagcac agacaactgc ttgaggctct ttattactgt ttgatacagc
      181 agttctttgt tggaaatctt gggttcggaa gcaactgtgt gtgtctaatc tcacattttc
      241 ctttatcatc aattccattc ctctgatatt tacaaaacta agcaacatca catgtgttta
      301 tcctggtttc tgaattagtc tatagaaggc tttctgc
//
LOCUS       KCPA01001635             685 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 179860tic ultra-conserved element locus
            uce-114, sequence.
ACCESSION   KCPA01001635
VERSION     KCPA01001635.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 685)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 685)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="179860tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>685
                     /note="ultra-conserved element locus uce-114"
BASE COUNT          179 a          137 c          142 g          227 t
ORIGIN      
        1 tcgatcaacg ggagaacact gtatttgtaa taaattcctt ttgctctgga tgagttctgc
       61 attttcaatg aggttaactt ggcaacattc tagttgattt taataaaaat agctgctttg
      121 aggacaggga gctgaggttg ccaaatttac aactgccttg cacaattact cttacacctc
      181 cttcagggct acttagaacc agtaagcaaa ttaagtgtat cgattgcaat tttgttggac
      241 taaccctttt ttcttaagga ataaacttga ttcctttcag tatgtgtctg ctcagagtga
      301 tctcttttct tttcagccat aacacaaaga caacatcatg gctggatcca cgacttgcga
      361 aaaaggctaa acctccagaa gagtgcaaag aaaatggtag gtgattaagt tttccttgct
      421 gctcagaggg gattttcctt tgtctttcag ttcttacaaa aatcaggcat ttgtgggaat
      481 gatgaaaggt gtttaattgc tgctttggtt agaagccata agtgatacca gttctcagtg
      541 tgccatgtgt ttctgctttt tattcccctt tctgatgcta tccaaagctg aggatcacaa
      601 gtgtgttttc tgcctgttgt gtgtgtgact ccgggactga ccctctccct catctcctac
      661 agagaacttt ggtctgcaga acaga
//
LOCUS       KCPA01001636             797 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 179968tic ultra-conserved element locus
            uce-4843, sequence.
ACCESSION   KCPA01001636
VERSION     KCPA01001636.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 797)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 797)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..797
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="179968tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>797
                     /note="ultra-conserved element locus uce-4843"
BASE COUNT          210 a          188 c          179 g          220 t
ORIGIN      
        1 agcttgtctg acagcacatg tccctcttcc agtggctatc caatatattt tacatatcct
       61 tctgttgctc cagaaatcaa aatatgagaa ctctcgtttt gacaaaagtg gcgcagcatt
      121 aatgctccag tgcatcccaa agcgcaggac ttaatgaggt agttataggc cttttaggga
      181 aaacgtctga aattacactt cacttcagga ttttaaatcc tctacgcagg actgcaagat
      241 acagactccc taaataggct atatttaagt attgtgcact tcccatctga attgggagtt
      301 gcagcctctg cacagcaacc tgacaaatat tatcgtgagc tactaaggca gtgtgacaac
      361 cgcatgctga gagcaaagtc tcactaatgt gttttggcat gcaggtttgt aatcacacat
      421 ttacatatgc aatgacctac atttgcatgt cagatcacac actgtcttgc tttattaaga
      481 ccgggcacct ccctgtgctt ggcggccaga gtggcgagag agggccagag ggccgtgttt
      541 tttggcagtt gagggatgaa ctgccaccaa ggattaggct gatatggcct gagcattaga
      601 cacttcatta gaggtaatct gtttaacagt gggcagtgta tgtaaacttc acagcccatt
      661 tgcggcacct tttccccccc atggcctttc ttcaaagggc agcgtggctg agtgacagct
      721 tgtctcatcc gctcccttgt cctgtcacac aatttagatg tggagagctg acatgagaag
      781 caacatagct gcacatc
//
LOCUS       KCPA01001637             735 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 180077tic ultra-conserved element locus
            uce-5077, sequence.
ACCESSION   KCPA01001637
VERSION     KCPA01001637.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 735)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 735)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..735
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="180077tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>735
                     /note="ultra-conserved element locus uce-5077"
BASE COUNT          255 a          178 c          116 g          186 t
ORIGIN      
        1 accccctgca agagaaggtc acttgcataa ggcaccatta ttaaggtcaa cagtgcatta
       61 acagctagaa aaccagaagt tagtcctcaa ggcataaata agagaaaaat tagctgcatg
      121 agaaaaatca gtttctaacc aatagtggtt ttatccaccc aacaaaaaaa ttattcatgt
      181 tccatacatt atgtaacatt agaccaattg tattttagct gctcttaact ggaatcaaaa
      241 ctgcagtcct gattaaagaa tggaaaagca tatagttccc cagaaccatg caataacctt
      301 tgtattataa tgaaaagtta tagttgtgtt acatttgtaa atacacagct tatacaatgg
      361 attacaaatg agctctgtag caagtaaaac aagctacttg acacattgca cgtttaatag
      421 ctgcaccaga cacctaaagc tcctctcaca caggaacagg gagttcccca tttccattct
      481 ggcatcctga ctccccccct ttccccctct caggtaaaaa ggtgcagaca tccccccacc
      541 ccttggaaat gattggtggt cgtcccatct cacaagatat tcctcacata caagacattc
      601 agactatctt acagttataa aacaaccaca agaaaaaaaa tgtgcctcag catacagtca
      661 tcaagagatc ctcatcgcat acagtcgccc aatcattaac attctcagtg cacatgctca
      721 cggcaaaggc ttagg
//
LOCUS       KCPA01001638             280 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 180184tic ultra-conserved element locus
            uce-3561, sequence.
ACCESSION   KCPA01001638
VERSION     KCPA01001638.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 280)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 280)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..280
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="180184tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>280
                     /note="ultra-conserved element locus uce-3561"
BASE COUNT           75 a           55 c           72 g           78 t
ORIGIN      
        1 tttttctttt catcttggct ttctgttgca gaatgcaaat gtagcctgcc ggcggtgaat
       61 gggctgaatt gtgattaaga agaagaagag ctcctttctt tgttctcccc tcaggggatg
      121 tttactggga gagacacagc ggatcagata tgaaaggcat tcaggtcagc attgatgtga
      181 gcgaaagtga aatcatacct aaggcattca aaagaccgcc gtgtcagggg ttcagctaac
      241 ggtgcatcta ctgtgtcttc cctgttaggc acaaaaaaaa
//
LOCUS       KCPA01001639             538 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 180289tic ultra-conserved element locus
            uce-7120, sequence.
ACCESSION   KCPA01001639
VERSION     KCPA01001639.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 538)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 538)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..538
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="180289tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>538
                     /note="ultra-conserved element locus uce-7120"
BASE COUNT          118 a          149 c          165 g          106 t
ORIGIN      
        1 atcaggagga gacctggaac gccacggcag cagcaggaga agggcttccc tctcgagccg
       61 agacaggagg tgaggctcgg caacagcagc tctgccaact caaggaaacg tcagggtctg
      121 gagaatttcc tcacgtgttt ccaatgtgtt ttttatgcat tttattgctc atctgccatg
      181 cagatcaaaa acgctggagg gattccaact atttcacaca gaatctcaca ctccaggctg
      241 gcaaagcctg agtttcttca cttgaaatac tgcccagtgt tattttggga tgtgacctga
      301 tagcggaagc ccacggggac cctggagctg agcggttcca gctgtgaagg atgcccgagc
      361 cgggccggtg ccagcggcgc tgtcagcgct gctggcaaag gggcccggcc ccctcccacc
      421 acggggaagc gccccccggc aggggcaggg gagctcgggg gggctgcagg tcccgtggtt
      481 ggtgctggaa acagctttat ctggcagcgg gaaccaccag ctcatttgtt aaacacac
//
LOCUS       KCPA01001640             792 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 180400tic ultra-conserved element locus
            uce-5994, sequence.
ACCESSION   KCPA01001640
VERSION     KCPA01001640.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 792)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 792)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..792
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="180400tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>792
                     /note="ultra-conserved element locus uce-5994"
BASE COUNT          219 a          161 c          148 g          264 t
ORIGIN      
        1 aaacctgatt aacagattat tttccactga catcacttct ttattctatt tacaagctaa
       61 ataggccaga cactcaattg ataaattctc atttcccttc atcttaatta actattcttt
      121 tacttaaaca atccctcatt tttccataga cacagtaata gatccattag agggtctatc
      181 tgataccagt gttcttttat ttatgagcac aagtccaaat ggttactagt ttttattttc
      241 cttcatactg tacaccatgt aatggctttg gtccaaacag taatcacacg atgggtgccg
      301 tttcttcttt cttgacctat cacactccac atgatttaat ccattgtttt ggatgttgcc
      361 aatgatttat tgtatgaaaa atgtaaatga tctggatggc agatgtttta tattttctga
      421 ccattcattt tcagtgggaa tgtaattaaa atttatgaag tgtatctgct gaattgcatt
      481 ggcaattgat gatctcctcc agtgctgtct gtctggagat gatgagtgat tgtggacagt
      541 gagatgtgtt gacaagggca gaaacagacg tgatgttact gtcatgagcg aggctacctg
      601 caaaaggctg ccgttttttt cccacaggaa gaaggtggca accagagctg tctttcttct
      661 tgcaagacag agtacaaagt ctctgcacac tcctgaaagc tgtcactctt cacgagggga
      721 atctctgtct ctctcagcaa tgggcatctg gaagccacga taccagctat aacagcccat
      781 gtcaaggata tt
//
LOCUS       KCPA01001641             688 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 180509tic ultra-conserved element locus
            uce-2851, sequence.
ACCESSION   KCPA01001641
VERSION     KCPA01001641.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 688)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 688)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..688
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="180509tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>688
                     /note="ultra-conserved element locus uce-2851"
BASE COUNT          177 a          140 c          179 g          192 t
ORIGIN      
        1 cccctgcagg tgagggtggg gcagcagcac ttcccagagg agagtgctca cctgtaggtg
       61 ttggaagcag aggggatgtg ggctctgcag ggggagggag gggcactgaa gggaattcca
      121 gctccggaga aaagattaaa atgctaatag tactttagaa ttttggaagg tagaacctga
      181 caagttagcg cagatcttta atctcccttt ttcttttctt acagcaagca aggatttggc
      241 acagacatcc tatttcatgg ctaccaacag gttgttatcc tgaacctctt tgttgcactg
      301 ttgtagcaca ctatagcttc ctttactgca gggccccctg atgtgtctta cccttgttgc
      361 agtgggggac tgggccacct cccgtggtgg tacctccccg cctgcagtgc ggtgtattgg
      421 acaagggcct gacggcacaa agggcttaaa tgcacaatga gaagtgtagt ggtgctttct
      481 gatgactttt tctcgattgt gagtgcctaa gaaaattggt agcctgaata gcagctaaag
      541 attacagaga gataaactta acctagaatt ccgagcatct tggtaagtac aaaactattt
      601 ttagtttaca cttgtagata atggcagttt tagtcttaac ttaattctag tgggcctaag
      661 atattttcaa gatagactag tactagcc
//
LOCUS       KCPA01001642             455 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 180615tic ultra-conserved element locus
            uce-2217, sequence.
ACCESSION   KCPA01001642
VERSION     KCPA01001642.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 455)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 455)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="180615tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>455
                     /note="ultra-conserved element locus uce-2217"
BASE COUNT          137 a           68 c          109 g          141 t
ORIGIN      
        1 ttgttttctt taggtggagg gcaaaggaaa tggaataaag acggttatag tcaacatggt
       61 tgacgttgca aaggcgctta atcggcctcc aacgtgtaag tagtaaatgc ttttgcattt
      121 ataaaacaga aatgcgatta tctcaggatt aaataaaaca gtagtctaaa ggtatgaata
      181 gatcctacca aattttttgg ttgtgagctg ggagcacaga cccagtttga tgttaagaat
      241 gaccgttaca ttgtcaatgg atctcatgag gcgaataagc tgcaagacat gttggatgga
      301 ttcattaaaa aatttgttct ctgtcctgag tgtgagaatc ctgaaactga tctggtgagt
      361 gctctcttag atgtttgtgg tgcaaagtta aaagcagact tgttgcaccc tttgggaagg
      421 taacatttca taacttctgg gataaattgc tgctt
//
LOCUS       KCPA01001643             515 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 180726tic ultra-conserved element locus
            uce-2118, sequence.
ACCESSION   KCPA01001643
VERSION     KCPA01001643.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 515)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 515)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="180726tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>515
                     /note="ultra-conserved element locus uce-2118"
BASE COUNT          159 a           93 c           89 g          174 t
ORIGIN      
        1 taaaatcagc atggcttgtc tgtgttattt aattattgtc taggctcaaa gatcaccctt
       61 ttctttaatt tgaaaaaaga aaatggatta acaaaaatat taaacagcaa gactgcggaa
      121 cataaaggcc atcggttgca ttttgcacag gataggttct ggttgaatga gatctgggat
      181 gtgtgccaaa ttaatagaaa aaatcctgtt cttcctctcc aatagccaca atgttcatta
      241 ttaagaaaag catatgaacc gcaggatttg attttaataa caccaatgtc ttcattaatc
      301 tgtactttcc atttagcctc attattaagt aaatgctgag ttaatgcagc acctattatt
      361 gttggctttt acatgaaaaa cctccttttt tttttgttca ttcaaggact atcaggtgtg
      421 tgtgtcatgt ttttaaacag gccatccgct gtcaatggct gttttcttcc ctcaggtcta
      481 tgtagctact ccagcaacgt gataagtaac aaaaa
//
LOCUS       KCPA01001644             404 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 180831tic ultra-conserved element locus
            uce-730, sequence.
ACCESSION   KCPA01001644
VERSION     KCPA01001644.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 404)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 404)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="180831tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>404
                     /note="ultra-conserved element locus uce-730"
BASE COUNT          162 a           76 c           45 g          121 t
ORIGIN      
        1 tgaaatctct aaagccatgt aaaacccgaa ggcattaaaa tttattaaat gatgcaataa
       61 caacagaatt ctttatttac aatagcatta tttaacatca aataagcaaa tagcatcagc
      121 aaagcaatat taacttgcat aaatgtattt aaaatttctc tgaatatatc tacctttgca
      181 taaactgcta acactagaaa tacaaacatc aatgcaggtg aacaaagtga tgttcagagt
      241 caactccgtt ttgaaaataa atcacaacct gaaacactgt aagctttctc ctgaagaacc
      301 atagtttata tattgcttaa ttttaccctt gtataatctt ttcatataca cacatctcag
      361 atgcaacttc atgatgaact gtacaaataa aacccacaaa tgac
//
LOCUS       KCPA01001645             702 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 180927tic ultra-conserved element locus
            uce-2708, sequence.
ACCESSION   KCPA01001645
VERSION     KCPA01001645.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 702)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 702)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="180927tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>702
                     /note="ultra-conserved element locus uce-2708"
BASE COUNT          242 a          101 c          128 g          231 t
ORIGIN      
        1 aaataataca ggtcagcatt tcgcatgatg tattttctgc ctggtgacct ctctacgaga
       61 aacacccgca agtttatgat catatgatat acaaaaatgt taaggtgtat atttttaaaa
      121 accttgaaat gtttgtactc tctgtatcca tcgactgaaa ttatttgttg tgttatttag
      181 aacaaacttt tgtctctgtg gaagagagaa accttttaaa tgataatttc aatagaaaca
      241 ttagacaaag gaatattgta actttagaga tttttatgat gaaggtgtgt ttaagagatg
      301 tcactttgat atttttacat tatgtcctac atttgtcagc taaaaccagg atattgcctc
      361 aatgagaaaa agcatgttct gcacttgtca aaaggcagta agtaatgatt aaaatagcag
      421 tgtgaaacgc tgggagatta aagtgatgct aatgataagt gagagaagaa aagggcaagc
      481 tatattttaa tccctgagag aatggttaat gacttctatt gcctgagatt aaactaaacc
      541 tgtctcatca gctttttctg cctggtgaaa aaaagctctc tgcactttaa tttattaaag
      601 tcttttaagg aagcacattg atccacagag gttaaacttt aaaaaattgt gcaaaataca
      661 cactaaaaat gctttaacaa aagtgtgact ttgttgcttt ag
//
LOCUS       KCPA01001646             625 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 181029tic ultra-conserved element locus
            uce-2820, sequence.
ACCESSION   KCPA01001646
VERSION     KCPA01001646.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 625)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 625)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..625
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="181029tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>625
                     /note="ultra-conserved element locus uce-2820"
BASE COUNT          201 a          109 c          131 g          184 t
ORIGIN      
        1 tcttgctcag tttataaata ttgtgtgcta gtttgggaga atagtttaga acccaccaaa
       61 gtctcggtct ttgtgtcaag ccaggagggg aaatttgaat atggaaaatt aagcaaatat
      121 tcctcagatg aaactgtctc ccaatcataa gtcatgtgat aataaatttc agttgagtga
      181 caacaatatt aacaaactga aaaaaagatt gatgtgcatc acaggtccat gaatgcaaaa
      241 taaaagggaa aggcttgcta gtctgtgata ggcaaagtat aaatatgtat cactcggttc
      301 taaagtgagt tatgattaca ttttcctact tgtacctgaa atctgtagag gttattcatc
      361 ttatccctgt atcagccatg acagttatgg ccatgcgctg cataccagat acctgctcag
      421 cagataaatc agcagccacg aagggacctg ttgttatcaa tttgatcttc agaataaata
      481 tacaaatatg tgtacggaat tgttgtcact gagaacaatt tcccttcttc tcgctgatac
      541 atttttaaga ggttgttcca agagccactt tctgacaatg ccagagggaa acagaggggg
      601 caggaggact agatttatgg actgt
//
LOCUS       KCPA01001647             605 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 181139tic ultra-conserved element locus
            uce-4900, sequence.
ACCESSION   KCPA01001647
VERSION     KCPA01001647.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 605)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 605)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..605
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="181139tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>605
                     /note="ultra-conserved element locus uce-4900"
BASE COUNT          219 a           93 c           98 g          195 t
ORIGIN      
        1 aattatttga tgatagaaat gaaaaggagg atccaaacaa acacagaaaa caaaagcaca
       61 agagaaaatg gccttgctat acatatttaa tgaaacagtg aaaatatcct gcacaaagac
      121 ttgagagtta aattgaaaat gtgtgtatga taaatggata taatactgtc tatgtaatgg
      181 gtttcctatt taaattttgt gaggatttaa tcagttgggc acagctgtgc aggatgcacc
      241 ataaactatg ttgaaaaata tgtagacatg tacatttatc tgctacaaat taagctcact
      301 tagaggtggt cttaatggac catgtagcaa tcattacaag cataaatttt aaactgtctg
      361 tttccagtga atttgctttg aaaaaaaatt aatgctcatc cttagtggaa cacagtaata
      421 aatggaagta cccttaatct gttaagcact aataacctac caattattca ttatgaaccc
      481 catgctgtat aatgtatgtc tgttacaatt ttattagcta ttctttactt aacctgcatt
      541 tttattccaa cttacaccct gtaattacat gatgttttaa gtgatgtgcc actaaattta
      601 cagaa
//
LOCUS       KCPA01001648             241 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 181233tic ultra-conserved element locus
            uce-3646, sequence.
ACCESSION   KCPA01001648
VERSION     KCPA01001648.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 241)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 241)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..241
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="181233tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>241
                     /note="ultra-conserved element locus uce-3646"
BASE COUNT           77 a           45 c           51 g           68 t
ORIGIN      
        1 agcatttcca gcagctcagc aagagagaaa ggctcggctt tatatcattc tttatatcat
       61 cgttgttaag agtagcaggt attgatgtac aatgcatctg tcatcttatt gtgcttccta
      121 tgaaaatgtg tgtacatagt acagataccg gagagaattc cacacttgaa ggcattcaga
      181 gatcagtaac agaatggcac aagaacaagg ccttatctac actggcatga tgcatataga
      241 t
//
LOCUS       KCPA01001649             667 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 181342tic ultra-conserved element locus
            uce-1415, sequence.
ACCESSION   KCPA01001649
VERSION     KCPA01001649.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 667)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 667)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..667
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="181342tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>667
                     /note="ultra-conserved element locus uce-1415"
BASE COUNT          233 a          146 c           94 g          194 t
ORIGIN      
        1 cttacacaat aaaaaataac cgaccctttc ctgccctaca cattttggca actattccat
       61 acagataggc acacgtgcca caaagtgatg gaagcaagca gggcttggag acatctttgg
      121 ctttcggaat aattacctat gcacaaactc tagatggcaa cattgcactt actgtattac
      181 taaaccaaaa tgtcacactg agtccctaca catcctcttt atcaacattt tatgtgccac
      241 agatctatag cctcttatta taagtgtaat gaagcagaag ttattgaagc attttattga
      301 ttgctcagat cacaagttta ctgtcatact gaattggcac cttacttgct gaagcaaact
      361 gctgacacct ttttaaaaaa gtgacaacta catctatttc atgaccagaa atccattttc
      421 atctctatca agacaagaat gcaattttca cttcatttaa ctgatgttag gcctgctcaa
      481 ggcatgacac ttagaaaaag acacaagttt aaggttctta aaatacttct ggtaactaga
      541 atgcagctca aaaaatttca agcctcactc aaatctataa acagcacaac actctaagaa
      601 tcactcagca agagggcatt ttccatttca atttcaaaat taccaaaata ttattttaat
      661 aagaaga
//
LOCUS       KCPA01001650             633 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 181452tic ultra-conserved element locus
            uce-285, sequence.
ACCESSION   KCPA01001650
VERSION     KCPA01001650.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 633)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 633)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="181452tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>633
                     /note="ultra-conserved element locus uce-285"
BASE COUNT          185 a          118 c          118 g          212 t
ORIGIN      
        1 gatttataaa attccatacc tcttccactt ttatttgatt gggaaaaaaa ccattcttgt
       61 ggagaattga agttcagttt actctcagtg caaattttga aaagtggaaa ctgtgggtgt
      121 tatgtgcaca aggcagttga tttaaagata ccagaaaggc atttaattta aaatcaattt
      181 caacatactg atttgtcctg cattacagtt acctgtagag atcctctagt catgtctatc
      241 tgtttttgat gcctctacag aataactgtc cagcatcctc tgcccaacca atcagaatgt
      301 aggaaaatct accgatatga cggaatctac tgtgaatcta cctaccagaa gtatgttgaa
      361 atctgtgtga gtcttgcctc tagctcgtgc atttagtgct cgtgctctcc tgctattccg
      421 aaattacacg acttgtgtgc aaaacctcta caagtatgtt gtttaatttt tttgtgctct
      481 aaaagctaag actttactaa atctcttagg tatgcttctg tacggtgcaa taaacatgag
      541 tgtacacgct agaaaatcta ggcaaaatgt attgcacagg tgcttcactt cttagggatt
      601 tgaaaggtgt gttatgtata aattagctgt cac
//
LOCUS       KCPA01001651             578 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 181561tic ultra-conserved element locus
            uce-590, sequence.
ACCESSION   KCPA01001651
VERSION     KCPA01001651.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 578)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 578)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="181561tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>578
                     /note="ultra-conserved element locus uce-590"
BASE COUNT          151 a          114 c          114 g          199 t
ORIGIN      
        1 ttatcagcag ccctcattgt ctgggcccgc ggcggcataa taacctacaa atcactggtc
       61 ctttctgcat tctcctaatt gtgtgtattc tctcctcttg tcttgatgag aaattgacat
      121 tttctggtgg agggactatg cggggagata agacttatag ttgttttaaa ggagtgcagc
      181 cattctttca gaggcctctt tattgctcta gttgacccac ttgatgagta tggatttcat
      241 gaggtctttt tcagcatttg aactataaaa ggttcagaat gacaccaccc cttatagaca
      301 aaagataacc ttgccctttg aatatattga ttctttatta actaggctgt ttaatgcaat
      361 gaaatgaggc attagattga agcctatttc aagtgctttg aataatcttt cttgaaagac
      421 ttttaaaagc tgctctgcaa taattggcat gtacactctt actccttcat tttgattaag
      481 gaatttttat catcttaaac tcactgtggg ctgacacaac atatttcctc agcagggctc
      541 ttacccagat gtcgtaggtg gtggattgct ctaggaat
//
LOCUS       KCPA01001652             612 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 181670tic ultra-conserved element locus
            uce-3871, sequence.
ACCESSION   KCPA01001652
VERSION     KCPA01001652.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 612)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 612)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="181670tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>612
                     /note="ultra-conserved element locus uce-3871"
BASE COUNT          223 a          113 c          107 g          169 t
ORIGIN      
        1 tttgctaaga atattcatgt ttgttcagta tgatcacatc tgaaatcact caaaaacaga
       61 aaataaaaaa aatatcatca tctgagttaa agctatgctg cttttaataa tcactttcag
      121 agaatgattt tatcagtaaa aaatggaatc aaggaattgg taccataaaa cctgtcaaat
      181 cccccaaaat agctttcaca taaaatctta ccataagata aaatatagct ttggggcaaa
      241 aggagagtcg tatctccagc aacttccata aataattcac ttctagcttg taaacaatag
      301 aaaagcacag tatgaatgcc aaagagggtc tttatatgtc ataaagccac tcaaaagtgc
      361 acttgctgca gcaagtctga ctgtgagctt cgatgtgctg gaaaagaaac tgccttgctg
      421 aggtcatcag ttagttgaaa acaatttccc tcatacagag aagcagactt actgctgtgc
      481 ttctgacata gacagattgg acaagactgc ataatgcaag gggaaggaaa tcttctatac
      541 accttctaaa tgaccaaagc tgaaaatata tcatcttcct ttaatggcta tcaaaagtta
      601 ccgtgtggtg ag
//
LOCUS       KCPA01001653             473 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 181777tic ultra-conserved element locus
            uce-5268, sequence.
ACCESSION   KCPA01001653
VERSION     KCPA01001653.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 473)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 473)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="181777tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>473
                     /note="ultra-conserved element locus uce-5268"
BASE COUNT          160 a           89 c          108 g          116 t
ORIGIN      
        1 cgtgcaaggc tttcgcaaag tcaggaaagt tcaggcatga accaagttaa cataaaaatt
       61 gctagaaaac acaggaatag taatttgggg ataagaaagg agggagaatt catgttataa
      121 gtgcaagtga tctggaaata gctgtttgtc ttggacattt gcagggaagt gacatcatgc
      181 cgtgtccacg gggatattaa ttctgcattt ttcaggccag attctggcac taaagttggc
      241 aaaattagac cattttgttg aagggatctc cgagccgccc acctccacca cacattacag
      301 cacacctatg acatgaccca agaacaatgg gtgaaaaatg ggccataaaa acatgaatgg
      361 cctgcttcat ataaagcaga ttttatagtg caggtgtgcc ttcatttatc gatactgtaa
      421 agcagtgaga tcatgctggc agtaaaacac aacatttgta aagcaacaac aga
//
LOCUS       KCPA01001654             327 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 181884tic ultra-conserved element locus
            uce-2454, sequence.
ACCESSION   KCPA01001654
VERSION     KCPA01001654.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 327)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 327)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="181884tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>327
                     /note="ultra-conserved element locus uce-2454"
BASE COUNT          102 a           68 c           74 g           83 t
ORIGIN      
        1 actgtctgca catacattag gccagttcag agaacaatgt aggcatgaaa ctactgttcg
       61 tgcagtctgg tcagggctgt gtgacacagt atacagtgtt ttgtcatcca aggaatgtct
      121 ttgatcaaga gtttatgcaa gaagaagcca tgaaacccta atccgttccc acagtccagt
      181 aaacgtgagc tggacaaaca gtggacaata gcagcaaagc ttgctgctgg aacaatggct
      241 gcaactaaaa aaattaaagg gttgctgact cacagttcct actatcagtg ttgattattc
      301 cccagaatcc tgaagatgct gaaagtt
//
LOCUS       KCPA01001655             731 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 181992tic ultra-conserved element locus
            uce-4227, sequence.
ACCESSION   KCPA01001655
VERSION     KCPA01001655.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 731)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 731)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..731
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="181992tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>731
                     /note="ultra-conserved element locus uce-4227"
BASE COUNT          233 a          142 c          100 g          256 t
ORIGIN      
        1 gttaatcgct tcagtaaacc ctcttctttc ttagacctga gatcatgatc ttgagctgtt
       61 ctcatagaat tgagcttttc aagttaccct ttcagcataa ttatttcttt taaacatcca
      121 cttttgaact tttttcaaac ataaatttgt acacaacaat aaaacacgct gctaatttgt
      181 catgctcctc tgagcaactg tgtcactcac accaagagcc actgactgtg gtgttcgaag
      241 ctttcgttcc tatttcacat cactcagttg agccttctgt agaaaagctt ttaacaacca
      301 catctggtct ttaataaatc actgcacttt gtcttcctgc caaaactcct cctttatcta
      361 acttacatct tcatgatgag ataggaaatc acacattatg gtggtgacaa acaattgtaa
      421 ttatgtcatt agtagccatt tagtctacaa aggttctcaa aaaggaaata taatgcacaa
      481 taagaaatat aggataatac agttctaatc cgctttttac ttcacaagtg taaaaagctg
      541 gcataattca tgggcacagc aggcagtaat agtattttat gaactatgca gctattttat
      601 tcccctatct acttaaaaat aaaaaagctt ttaatagctt gatttagaca taaaagttat
      661 ttatgatgct tcactgatta taatatttat ttatttaact ttccatgaaa gtgattcttt
      721 ttgaaatgta a
//
LOCUS       KCPA01001656             729 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 182100tic ultra-conserved element locus
            uce-5707, sequence.
ACCESSION   KCPA01001656
VERSION     KCPA01001656.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 729)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 729)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..729
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="182100tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>729
                     /note="ultra-conserved element locus uce-5707"
BASE COUNT          228 a          123 c          162 g          216 t
ORIGIN      
        1 agatgtcggg tgtcatataa atgtaaaatg ttgctattct acagggtggt ttctatacac
       61 gtgtagatta aacaatggct ttgcacagga ctaaaatctg cagtgctgct gctgaaatga
      121 gttaattgta tggctatgga cacagtgatt ttactgagct aaaagaggag gacagtgatt
      181 catggctgca cccatgctct ttgtcatgaa atataaatta aaaatagttg tattatggta
      241 ggctacctgt attgttacat tcataatgga tatcacacat ccgtccttgc tcagtgttgc
      301 aggcaaagca tgttagagaa actatggcag tatttttctt ttaggtgtaa caatctgtca
      361 gtatcaaatt ctcttagtca gtagggagca tatagtgttg atttactgaa aatctgggat
      421 tatgtctgct ctgtggtgag catagattta agaggggaga gataaggggt ctccaaaagg
      481 tgaagaaaaa cacaaatgaa acctagcaag gatagcttga cagctaagat gcagtatagt
      541 caccgtcaag tcttcttgaa ggaaaaccct tgctcacagg aatgttctga gcactgcctg
      601 taccttaaac aacccactcc attacccact tcacaccaag gaactgtaaa tgtataaatg
      661 aagctgtggg taaaaagcct taatgttttt gtgttcaatg tacaaatgtt ttctgatgga
      721 ccggaaaca
//
LOCUS       KCPA01001657             413 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 182208tic ultra-conserved element locus
            uce-3445, sequence.
ACCESSION   KCPA01001657
VERSION     KCPA01001657.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 413)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 413)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="182208tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>413
                     /note="ultra-conserved element locus uce-3445"
BASE COUNT          126 a           63 c           79 g          145 t
ORIGIN      
        1 gtggatctgc tgatgtacag tgcctttgct gctatggatc aaaatcaaga gacccgtgta
       61 gataaatctt attgtataag tagaaaatta cttaatttca tactagaaat ggattgatgc
      121 tgcaagttaa aatggactgt ttattgaagt tccaaatgtg gtagcaaaaa atggtgtctt
      181 aagtgcttag tgtttgatgt cattaacagt ttcgtaatac tctacattgt agaaagattt
      241 tgatactaaa ctgtgtcatt gtacatagtt ctaatgcatt gtattgacca ccagtacttc
      301 tataatggta gattattgtt tgtgcattca gacttttaag cattaaacat aaataacttc
      361 ttccctcagt ggtcacggaa tgtaccacta cagacacttg tgggtttgct act
//
LOCUS       KCPA01001658             530 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 182316tic ultra-conserved element locus
            uce-3493, sequence.
ACCESSION   KCPA01001658
VERSION     KCPA01001658.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 530)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 530)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="182316tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>530
                     /note="ultra-conserved element locus uce-3493"
BASE COUNT          161 a           94 c           85 g          190 t
ORIGIN      
        1 aaagccaatc cgaaatgaaa ctagtctaaa aattcattgt tgcagctgta cctgaaataa
       61 aaatgttatt gatgactgaa ttttcttctg tgtatatttg gtgagctgta ttaaaacaga
      121 aaaaaaaaga aattacttgt attttcttcg ctctctgctt tgaaaacatc tatttgattt
      181 cacccccatc tgttgtaatc aataacctga ccatcttgtt ttttattaaa tgcacttact
      241 cttaatttca tccaccagtg gttttagaga gaataatgtg gagttaccta tataggtttg
      301 acattataaa tcacttcttg aggctgaatc gtatagcggt atcgattgat cctgatatat
      361 cacagaaatt tactgtcact tctgttttca attaaagata caatcagtca gataatgact
      421 taattggatt ttacagaaga ttgagtttta ttgcccagtg ctttacgagt ttagttaagg
      481 aagatcattt tatcacactt gtcagcctgc tcccgcagct ccgtgccctt
//
LOCUS       KCPA01001659             458 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 182424tic ultra-conserved element locus
            uce-7471, sequence.
ACCESSION   KCPA01001659
VERSION     KCPA01001659.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 458)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 458)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..458
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="182424tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>458
                     /note="ultra-conserved element locus uce-7471"
BASE COUNT          148 a           80 c           67 g          163 t
ORIGIN      
        1 ccctgagctt caatttccaa cgacttattt agatgtaagc aatgacagct gtaatcatgt
       61 tttaaatctt gctttgtatc cttagttata atgttgttca attaatattc agaataatgg
      121 aagtgatgtg cccctttgaa aaagacttga atgcaggcca aagctttggg aaactgattc
      181 tcaagaggat taatcagcat ttaaaacttg cattaataaa aatctgatct tctactgtgt
      241 agcatgcata atacttttca tttttaagca ttttatttta atagtgtggt atcctttgtc
      301 ctgattttta aagggatttt aaaatctaac tccttcaaat caatcctgct ttgacccctg
      361 cgcattcttt tactaataaa aaacattaaa gacatccttg attcacaaat acctctattg
      421 ctaagtatga gcaaaacaag catgcttgta atcgaaat
//
LOCUS       KCPA01001660             354 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 182523tic ultra-conserved element locus
            uce-4686, sequence.
ACCESSION   KCPA01001660
VERSION     KCPA01001660.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 354)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 354)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="182523tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>354
                     /note="ultra-conserved element locus uce-4686"
BASE COUNT          100 a           92 c           67 g           95 t
ORIGIN      
        1 gggaaaaaag ctgttggacc gccaccaaat ctccccccac tagagacaag agcccatctg
       61 ctgagctctg caacttagct ttaactacca ttcaactcgc gtctctgcag agatcaatct
      121 acagagctgg cagatggacc cctgcttccc tgagtcgctg tgttatttgt ttaataaatt
      181 taattaatat ccatactgca ctggattgct cccagaaagg gggctgcagc tctctctttc
      241 cccgatagca acatgatgag tgatttccca gaaaagacca gataacagta cccccaggcc
      301 attgaaaaat taaaagtgcc atgtgcttac attacttcgc atgtattaat tttt
//
LOCUS       KCPA01001661             374 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 182627tic ultra-conserved element locus
            uce-5223, sequence.
ACCESSION   KCPA01001661
VERSION     KCPA01001661.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 374)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 374)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="182627tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>374
                     /note="ultra-conserved element locus uce-5223"
BASE COUNT          130 a           67 c           68 g          109 t
ORIGIN      
        1 tgagcacact gccatcttta tgaatgcagt tatagatgta ctcccacagc cctgaaagag
       61 tagcagcagc caggctctca aagggttaat ctgcagttta ctattgaata acataaaatg
      121 agctgtaaat aatgtaatga tatgtattgt taagctacat atactgtacc aggtgcaagt
      181 actcccactc ctcacttaga tataatctgg ggcagtcaac aaacacagat gtattttaac
      241 aaaaaagaaa gaaagaatta aaacatatgt aagataattt cactgagata atgatccagg
      301 taaaacctgg cctgtttttc agagtcactt taactgtgcc gtgtaaaata caatggcatt
      361 ttgacttgtt tttg
//
LOCUS       KCPA01001662             583 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 182735tic ultra-conserved element locus
            uce-44, sequence.
ACCESSION   KCPA01001662
VERSION     KCPA01001662.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 583)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 583)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..583
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="182735tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>583
                     /note="ultra-conserved element locus uce-44"
BASE COUNT          180 a          150 c           97 g          156 t
ORIGIN      
        1 aactctgcac aatgaacttg cccgtaatcc aataataaaa gctgtaacac gctgcctcgc
       61 atttactacg ccgccaagat tcctccactt ccaactattt ttagccaata aagcagaaat
      121 aaatccagct cgcgaggcaa caacccagca cgatatgatt tccatagcta aaacactaaa
      181 ggcaaatata attacattga gtacttggac ttctataaag tggtgaactt gttctcaatt
      241 gcctgacaca atcccagagt gatggcaaca actggtcagc cctatttgat tactaataag
      301 agagatgtcc cttctgtcag atacctcaca ttccccacta agcaaacagc tatttcagct
      361 agttaaacat tagcattgct ctccactggt ggtgcatatt tctttaggct taactcaggg
      421 acttttccag gtttaatttt tcaggcactg gacagcaaag ttcatgatca aaagataact
      481 ttgtcctgcg agctactgaa acacaagtca aaccagccta accctcttcc tcgcaaaacc
      541 ggtgtcgggt gaacgcccat ttattgctcc aaggaaccca ttt
//
LOCUS       KCPA01001663             427 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 182846tic ultra-conserved element locus
            uce-534, sequence.
ACCESSION   KCPA01001663
VERSION     KCPA01001663.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 427)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 427)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..427
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="182846tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>427
                     /note="ultra-conserved element locus uce-534"
BASE COUNT          137 a           74 c           79 g          137 t
ORIGIN      
        1 tacaacttga atacaatgtc tggccaactg tgtatacagt cccaagatgt gtcaaattac
       61 tcaaaccaaa tgtcatctgt ctgtgaatat tctttgtata attaattgag tgtctgggac
      121 agtttcatgg gtaaatctga ttatttaggg tgcaatgtgt taaactatta ggcaagttta
      181 acctacattg tggcatctag agcaaaagga caaaacagta aagccttttt taatctcacc
      241 ctgatcaaac aaccctcttt ctccaatcac agctttgtgc gtgatatctt tctgctagtg
      301 tttcttattt aattaaaaca gacactgaca gaaggacatg gattaggact gtaatgatgc
      361 atttacttag attaatcgga ggctcctttt ggagtaatgg cttaaacaaa gaacaaaagg
      421 aaattgt
//
LOCUS       KCPA01001664             615 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 182956tic ultra-conserved element locus
            uce-898, sequence.
ACCESSION   KCPA01001664
VERSION     KCPA01001664.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 615)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 615)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="182956tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>615
                     /note="ultra-conserved element locus uce-898"
BASE COUNT          169 a          124 c          137 g          185 t
ORIGIN      
        1 ccactaaacc ctgttctgtg gtggggtctt tgttgttgct ctggtttttt taaggatggt
       61 tattgatctc ttgctgagct gagatttcag ttttatgcca gatagtttga ttaatgggct
      121 ggtttctgta agtggactga atggggatag gaagcacaag ccgctcgtgc cgccaaccct
      181 aactccgtca agacgcatag ctcattatga aacagttatc aagtatacat gaaaaattaa
      241 ttgggctcag tttgattctg aaaaggatca gctttctact tggcggtccc cccaatcttt
      301 ccagatgttg cacgctagcc cctcgagaag cagcgaaggg agatgtatta atacattgta
      361 ttgattagat caagacccct gacagttatt tgtagagata ccatctggct gctgttcgaa
      421 ttccttcacc aaaaacagga cgtgacatgt tattaatctc aactctctaa gtatagacag
      481 ttgccttttc tgctaaaccg cattttacca ttccgtagga gatggaggca gacctgaagg
      541 gtgctgaaat taaggttatt acacaaattg agccatatgg tccaaatatt tcagcaagaa
      601 aattgccagg caata
//
LOCUS       KCPA01001665             564 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 183064tic ultra-conserved element locus
            uce-5771, sequence.
ACCESSION   KCPA01001665
VERSION     KCPA01001665.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 564)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 564)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..564
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="183064tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>564
                     /note="ultra-conserved element locus uce-5771"
BASE COUNT          168 a          106 c          107 g          183 t
ORIGIN      
        1 ctgggataaa aatgaaaggt caagagacat gaaatttctt gtggaaaaac tgtttggatt
       61 tttagggagc ctgcttagta cttgttcttc cgatatccca ctactcagag gtagaggaat
      121 tttccttcag tggcttattt ttatgtattt tgtctttcca gaatctactc tgaggaggag
      181 aaaggccagg ccccaagcat ctctaactgc cactcatagt agtactttag cagaagagat
      241 agtggcactg ctgaggacgc tgcattcgct cagccagtgg aatggactca taaacaagta
      301 catcaactct cagctaacct ccatcaccca catctttgca ggaaaacagt cagaaggggt
      361 agtttccacg ttttaaaata agctcatttt tatagcaata tttgttttga aattataaat
      421 actaaatctt tgtaaaatta agcttaatat tgaaaccatt tttcttaagt tgaaatatgt
      481 gtgattaact tttaaagcag actccctaca gttaaatttt attgttcttt gctaggctgt
      541 gttggatgac tacttccctg acac
//
LOCUS       KCPA01001666             559 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 183170tic ultra-conserved element locus
            uce-6995, sequence.
ACCESSION   KCPA01001666
VERSION     KCPA01001666.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 559)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 559)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="183170tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>559
                     /note="ultra-conserved element locus uce-6995"
BASE COUNT          169 a          127 c          116 g          147 t
ORIGIN      
        1 tcagagccag agctctgcag ttcttgctga accagcttcg catttgaaat attgtcagaa
       61 gttatccatt ttagcaagct agacacaaca cgctccccgg ctcctggcag ggaacaatgc
      121 ggagcgtgca gtggctaagc actctcattg aaaaaaccag gggatgctgc agtaattgtc
      181 ctgagaggct agaaaggaaa caagcctcta tgctgacagc ttagctcagc gtgaactctc
      241 atttttcaca tggagctaat taaaaactga aattagttaa atatggaaat gacacttgca
      301 agcactttag ctgaatcctg gcgaaatccc tctagagtgc tgagacacta cctgctgctt
      361 caaaactccc caactgaatt tcacagttaa aaggctgagc aaagggaaag ttattacaga
      421 gatttccaat tcaaaatgtg tctgtaaaat cctaaattaa atttcatggt agccctttca
      481 ataacgaggg acatactgtg cagatctggt gctccaataa cgtccctgcg tgtattctct
      541 gattatctca cctttaggc
//
LOCUS       KCPA01001667             537 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 183275tic ultra-conserved element locus
            uce-8036, sequence.
ACCESSION   KCPA01001667
VERSION     KCPA01001667.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 537)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 537)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="183275tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>537
                     /note="ultra-conserved element locus uce-8036"
BASE COUNT          126 a          143 c          124 g          144 t
ORIGIN      
        1 cacccacccc ctcagctcct tttcatctca ctctgtgctg tgcacattgc catgacactg
       61 cagtgccttc atctcactcc cagagcactc caccccagcc tttgaagcaa ggggaaccaa
      121 agcagccttt ccaggtggga caatggtgca tctcccattg actcccctgg agcccatggg
      181 aaggcagagc tcccaaggaa cccgacatac ctgtatattt tatatctggt tgtaaatcct
      241 tgacgatgtc tttccacaaa ggataagtag ctccgtgagt ggtggaaagg ccccctgtct
      301 gaaataagcc aatcaaactc cttggagaca tgttggttgg tagcagctgg gtcctggtgg
      361 gagggctgta tgagtatatg gtcccatata aacaggaggt agaggaactc aacaagcctc
      421 cagttcatgc ttttctgtct gcctttttcc tctcattctt gctccattct gtggagtcct
      481 gttggtagga ggaaggagag agattaaaaa tgctctgatc ctttgacaac tttctct
//
LOCUS       KCPA01001668             467 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 183381tic ultra-conserved element locus
            uce-7047, sequence.
ACCESSION   KCPA01001668
VERSION     KCPA01001668.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 467)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 467)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="183381tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>467
                     /note="ultra-conserved element locus uce-7047"
BASE COUNT          117 a           98 c          143 g          109 t
ORIGIN      
        1 gacagatcgc cataacaggg cgcttctgca cctgggccag cagctcctga gtttccctgc
       61 ggatggcggg ctgggggggt ggaagtgctc ggagcgcagc gccagggccg gggctgcaga
      121 ggaagctgag gcctccagcc ctgcacagga agcaatctta aatgccagat tccaggcaga
      181 gtttaactaa ccactgacag ctctgtaaac aaagcaggga caaaaaggga acggctttcc
      241 cttttctggt agttttttgg tttgggggct gcaggggaat tctgtaatag tcggcttgat
      301 gggatataag ccgaggctgg aaaggctttg tatatgaaga actgtaaagg ggacttcatg
      361 gactaaatca taaaggggca cgggcaaaac gtgcggatta aactactttt cattctttga
      421 gcaggatttg tacatagttt gacttcccct gggtggtatt taaaagc
//
LOCUS       KCPA01001669             795 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 183493tic ultra-conserved element locus
            uce-7465, sequence.
ACCESSION   KCPA01001669
VERSION     KCPA01001669.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 795)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 795)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..795
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="183493tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>795
                     /note="ultra-conserved element locus uce-7465"
BASE COUNT          230 a          133 c          162 g          270 t
ORIGIN      
        1 ttttcaagtg cttgaccagc taggagaaag tcattgtggt tttaattttt catgaaatag
       61 ggcatgtcag atatctaaca atcaaatttg ctaggtactt attgtataaa ttactcaata
      121 agagtggaaa ggagagttgt catttttaga acacgttcca atagcttgtc tttggagtta
      181 aatagagctg tcttgatcat ttttacatat agacttcttt gaacactaaa aagaattata
      241 atcacctgat tataaattca ctgttaatat agccttagag ctgagaacat ttcactctag
      301 tagttaattt agtctgtggt aaattctcac tgttatttaa tgtcatttat cacctgctgt
      361 tttgtcttac tgtgaacatc ctgcctgccc tgtacagtct acactacatg gaccttctgt
      421 gactttaatg tactcagaac aaaggctcca aagtgcttct atcgggagga tttggcaact
      481 tgccttagat atattcaagc cattttgctg cctgtcactc agtgctttac aaattgaact
      541 ctgaggagag gtaaaaaggg tctatgaggc attttttttc tgggaagaat atgctaataa
      601 agcgccatca gcaggaagca ggttgtgtct gaaagagttt tgtcaactct gaattaattt
      661 tgtgtgttaa gaaacacggg ggtgcttcta gagctggtct gtggtaatta atccttcctg
      721 tttctggaag aggagaactg taataaatgc agcccagatt taacagatgt gtgcacacaa
      781 tgtctgcttt atgag
//
LOCUS       KCPA01001670             388 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 183591tic ultra-conserved element locus
            uce-2692, sequence.
ACCESSION   KCPA01001670
VERSION     KCPA01001670.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 388)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 388)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="183591tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>388
                     /note="ultra-conserved element locus uce-2692"
BASE COUNT          115 a           64 c           85 g          124 t
ORIGIN      
        1 ttattatttt atagtgtagg taatttatta atcctaacaa agatgagtga tttggaggct
       61 gcattatttc ttaggagtta ttttatttga taatgacatt aaatattaga aactataaca
      121 gctggtgtgt ttatccttac ttgagtgtat taacctcttt agcccttttt tccagaagaa
      181 ggattcagca ttacagattt gactgtcagc tgcagtgcct ggcggcccgt tggattggca
      241 ccctgacaga atcgaaagtc cagtgctgca agtaaacatg gatgacattg cagatagata
      301 gaactggctg acttgaggca cctgcagctg tttgcaccag aataaaagca aaggttgtgt
      361 tcactggcat ggaaaaacac tgaattta
//
LOCUS       KCPA01001671             440 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 183691tic ultra-conserved element locus
            uce-2642, sequence.
ACCESSION   KCPA01001671
VERSION     KCPA01001671.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 440)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 440)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="183691tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>440
                     /note="ultra-conserved element locus uce-2642"
BASE COUNT          124 a          111 c           96 g          109 t
ORIGIN      
        1 aagttaaaat gcaaacccac tgccacagca ccatgtctgg tataatgttt ttttcaaagc
       61 agggctgtct aagccttcat gtcacaggga ttcagcaaca ctgaagtgaa atacattact
      121 gggaggatga catcccactc agttataatt gaaccaaagt aaacatcagg caatctctgc
      181 cattgccagc tggggaaaga gcctacctga gacaagcgag actgtgtctt tctcccatga
      241 gacaacagtg atgtatgcct ccacagagga ggggataatg cacttgaaca ctgctacatt
      301 gcctctcatg gctttctggt cctccacacg gactgtatag ggttcccgta aaactgcagg
      361 gactttgtta aacaagcccc acccgccagg ctgccaaagg ctgattgcaa gtaagcattc
      421 ccagatcttt ttgtttgctc
//
LOCUS       KCPA01001672             828 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 183800tic ultra-conserved element locus
            uce-5659, sequence.
ACCESSION   KCPA01001672
VERSION     KCPA01001672.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 828)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 828)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..828
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="183800tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>828
                     /note="ultra-conserved element locus uce-5659"
BASE COUNT          267 a          157 c          158 g          246 t
ORIGIN      
        1 taaattgccc ttcccacagt gccttagaca agcatcagtg ctccatcaca aaataaatgt
       61 gttgatattt gatagctcat ttgaacacga tggtatttac attttacttg gttagatttt
      121 catttaacac aagttatggg atcacactga aaataaaaac aatacttctc tgttcctctt
      181 gccattcatg tctacttttg tttcagccta aaataacaca ttgctggagg gtattttctt
      241 aacactgcca agcctgaatg caagccctgt ggaaaatgtt tgtgttgggc ttgccatggt
      301 ccaggctaat aacaacgtga tgatgtatag gtgaattcct gctcctcaag tcctctgtga
      361 catacggatt aggtctgccc ttatcttcta agacatctgg atgagtgtct gggttttaat
      421 ttcacaatga aatcacaggg gactagagtt atgttatgtg cttatgaaca aagtggaata
      481 tccctggtag gggcaagagt ggattacctt agataactct acttaaacca gggaacattt
      541 gagaatgttg aagaaaggaa agaggttcca ccaataaaaa caaacaagga cttaaatttg
      601 tgttctgtgt actaaacatt ttaaagctcc tagaggttga aatatgacca catgtaaatg
      661 gactgataaa actaagacaa ctcttgaaag accagatcag gcttcccagg acaactacca
      721 gcagtaaatc ctaatggcat gcataaatca tttgaagaca catttattca gaagatgcca
      781 ctttaaagtc aaaatctgct ttaatcacca gaaatagtat gtgcatgc
//
LOCUS       KCPA01001673             672 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 183908tic ultra-conserved element locus
            uce-7981, sequence.
ACCESSION   KCPA01001673
VERSION     KCPA01001673.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 672)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 672)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="183908tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>672
                     /note="ultra-conserved element locus uce-7981"
BASE COUNT          198 a          133 c          112 g          229 t
ORIGIN      
        1 aaacttcttc aacaaattat gagatagatg ctttattgag attacatcat gattcacaat
       61 tttaaatctg aaaatatatt aaacaattcg gtgatgcttc taaggtggac acttttttgg
      121 taggcagcag taattgctgc aatagctttt aggtgttcta atgcactcaa gtgaattatg
      181 caccacactg cttctgaatg acacagccat ttctgactcc attaatatgg aagatttcag
      241 ccaaatgctt ttaaacgata gcttctcttt atttctaatt tcagactcta ttgatttcct
      301 tctgttccct tcattatgat ttcaattgat taccttggca actgcaataa caatgattgc
      361 acttgacact gtctgagact ctcgagatgg tatttgaata ggaatggtat aatttggggg
      421 aaaatggcta caagaacctg ccattaatgt tacacttaca ctttactttt attgacttcc
      481 ctctctttca caggcccttg tcagggactc tcttgcaaat attggttagg atttcagtga
      541 ctccttgaag taaaagattc ttattaacaa agagaacact ttttttcagc actgtgacag
      601 ttcagggaaa cgtcccaccc tagatgagat ttttgttccc ctgccagaaa aactaccaaa
      661 acaatgttcc tg
//
LOCUS       KCPA01001674             544 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 184014tic ultra-conserved element locus
            uce-654, sequence.
ACCESSION   KCPA01001674
VERSION     KCPA01001674.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 544)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 544)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..544
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="184014tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>544
                     /note="ultra-conserved element locus uce-654"
BASE COUNT          175 a          110 c           84 g          175 t
ORIGIN      
        1 aaactttgat ctttacacac catttcagag tccatcgctg ctttcggtat ctaatctttg
       61 caaataaaaa aatagcatta tgctggtcag aaatgaaaga gattctgttc tggatggaat
      121 caaattcctg aacaaacttt ccatgaagta atctttacct acaggaagtc aattaaaatg
      181 tgacaggaga gattaagggc tctgtgacag atttcactgg tctgtactca gtatagacac
      241 agcaatgcta taacattgaa gttacaatga atatttaaca atccaatgac taactactct
      301 acaagagttt tcaaaataat gtgatgtccc tatttgttag agcaagttca ctctggcatc
      361 aattaaatca tgaactgtca tcttgattgc tctctttgtt gagggacagc acatttccat
      421 ctaaggatca gctcagcttt atatctctgc aagacaattc ataattctga gcagcagaat
      481 gaatgcacaa attacattct tcaacctttt actcccacta aatctttcct tttttccact
      541 ttgc
//
LOCUS       KCPA01001675             735 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 184124tic ultra-conserved element locus
            uce-1888, sequence.
ACCESSION   KCPA01001675
VERSION     KCPA01001675.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 735)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 735)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..735
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="184124tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>735
                     /note="ultra-conserved element locus uce-1888"
BASE COUNT          259 a          144 c          125 g          207 t
ORIGIN      
        1 aacaggctac agccaagaga aatgctcttg tgaatgggtt ggcagctcta aaagcagggc
       61 tccaatgatc acacccaagc aggttgctca cagcttagct actgctaaac aaaagcccct
      121 tacaactaca gctcgtgcta catttctttt tcgagggata gttttaaatg caaattcatt
      181 tacagaggta gatgagatga aatgtgcaac agacacacct gactaacttg cattttgtat
      241 ctctaacact caaaagtaca atgcttatgg taatgaattt tatctattac aagggaaaac
      301 aatcaccttt gatgacatta tagaataaac acatttaaca gcatgccgaa ttgctgaagt
      361 atcattttca acgacctcat tagtgtcact taattaaaac ttcctgctct tgactttgat
      421 gctggtgcag gcaaaaacac agagagaatt gaacaaacaa caaaaaaggg aggggtaact
      481 tctagtgata aatagcagta gttgctaatg aaaccaaatt atgtaccttt ttcctgcaac
      541 tccgataaaa taatatgaaa cacacagcaa ctttgcatca aacaaattaa tcagccgtca
      601 gcagattcgc ctgataataa tctcctgccc ttattgataa tttaaggaaa aaaagttgtt
      661 tttttctgta cacaatcatt aggttggtga taattaaagc ttcagcttca gaaatgccat
      721 aataaccgtt aatta
//
LOCUS       KCPA01001676             586 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 184235tic ultra-conserved element locus
            uce-2620, sequence.
ACCESSION   KCPA01001676
VERSION     KCPA01001676.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 586)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 586)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..586
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="184235tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>586
                     /note="ultra-conserved element locus uce-2620"
BASE COUNT          170 a          138 c          129 g          149 t
ORIGIN      
        1 cttgatatac aacaaagttt gaaaattcct cttagtacag aggaaagacc ttggtgcaga
       61 gtaacagaca ttttttttag tgctaataaa tatgttcgca gggaggtttt cgcgtgcaaa
      121 atgcagcaga ccggctttcc atggctactg ctccttgcct ttcacacccg cctcgtctgc
      181 cagctggatc tatcttgaag gagagacctt aaatccctgc aagcaggctg taaggcacat
      241 gcagtagcag cagtgtactg acatttgcta agcaccagcg tccctcaagt gactgggagc
      301 gaagccattg acgtcactga acaataggca aaatatttcc tcctcctcca tagtcctgaa
      361 ctgtaaacac ccagcttgca cacagcaggc tgaacatttg gggagaggcg gagaaggaga
      421 atgtgaaaaa ctctcaactg atgctgctga aaacaagcag ctgttcctgc ataaccagtc
      481 tctctctatt ccttccatga gggttgctgg ttccccctag tgtaggtcag aagataaagt
      541 aaaatataaa taactctgtc tactgaactc acgaggaata ttaatt
//
LOCUS       KCPA01001677             660 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 184344tic ultra-conserved element locus
            uce-6100, sequence.
ACCESSION   KCPA01001677
VERSION     KCPA01001677.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 660)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 660)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="184344tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>660
                     /note="ultra-conserved element locus uce-6100"
BASE COUNT          118 a          237 c          144 g          161 t
ORIGIN      
        1 cccagtttcg cccccctgcc cccgtctcct ccagtaatga taagcagccc accaggcaaa
       61 gctactggcc cgagacctgt cctcccagtg ccggcttcca atccggtgac ccaagtgtcc
      121 acgtctccca cggctcctaa cgggcttcct gaaaacctgg cttatccggt tccttcacct
      181 tctacctcag gtccaacgcc gcctccgccg cctcctcccc ccccactgcc ttcctttccg
      241 cctctgtcac tctctggacc tcaagcttct ccttctccca actccccgaa tgcctcgact
      301 ccctcatcca agcctagtgt tctcccttct ccctctgcag ctacccctgc ctctgttgag
      361 aactctctaa actctgtgct gggagactcc tctgcttctg agccagtctt gcaggcagcc
      421 tctcagccgg ttgaagctcc gacccagcag ggtaaggctt tctgttattg ctactaatgc
      481 gctggcggag cccgtgggtg tcagagaact gcccccagga gttaacgctg cagtgaccct
      541 aatgccacca ccctttggaa gactggggta agggaaatgt gcctaggagc cgattgtggc
      601 ctatttggta aaccctgtac tgttggttta tttggaaagg atcattagat ggcagcacac
//
LOCUS       KCPA01001678             526 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 184449tic ultra-conserved element locus
            uce-4090, sequence.
ACCESSION   KCPA01001678
VERSION     KCPA01001678.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 526)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 526)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..526
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="184449tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>526
                     /note="ultra-conserved element locus uce-4090"
BASE COUNT          174 a           93 c          100 g          159 t
ORIGIN      
        1 tcttttgacc atagacgatc tatgaggcat gcaaaagagg gattttaaca caaatataat
       61 tctaagctcc cataacggct gaattgaaag cagcgcttag ctcggccact gtgctgagga
      121 gattgaagga gttactttcc tcagtaagaa tcattgagag tgtcaccagt taattcctgt
      181 tctatgctcc tcattaacat tactctcaag tttctggtta tcatatccaa aatattaaga
      241 cataataagt acgaaggtgc agataattgg atattaacca gaccatactt gactgggcag
      301 gaggtagggc cttgctcaaa ctaatcctga aatgtattaa tcaccaatta atgaatgggt
      361 ttcaaattca ttttctatta tagaacacct ctgagtatct aagctttttc taataaaatg
      421 agttggaata acaggatagg aataagaaac actccaattt gaggctggtt tgaattaatt
      481 ccctttgtta agttcattga aaacaataat cctaggagca gggact
//
LOCUS       KCPA01001679             638 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 184555tic ultra-conserved element locus
            uce-4208, sequence.
ACCESSION   KCPA01001679
VERSION     KCPA01001679.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 638)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 638)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..638
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="184555tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>638
                     /note="ultra-conserved element locus uce-4208"
BASE COUNT          200 a          115 c          155 g          168 t
ORIGIN      
        1 cttaatacca cgctaaattt atgaaattta cagattacct aaaatgctag gagttaatta
       61 cagtctgctt tccctggcat gtcagcttga ttaaatttgg agttccaaga tgaattggcc
      121 caaattcatt agtgttcccc gggtgcatat gttggtcaag gtcaagcgaa gcacattgac
      181 tgtagtgtta gtcaggaggg ggaagggttt taaagaaggt ggactcttaa aaggtctggg
      241 gttgcagcaa gaaactttga tactttttaa cttaataaat cttgacagcc taatcatggc
      301 taagcctttg cagtgttatt ggtacagatg gcaaagctag acatatttaa agagatctca
      361 gcagctagtg gcaggagagc attgaatcca aatgcactgt tgggctctca gagaaagtgc
      421 aagaggagag gataaaaagc tacacagcat ttccatctct tgacatctcc aacagcctca
      481 gatacaaaat atgataaggc tcctgctgag ctaataagcc caacaaatgt ctgtgtccat
      541 gaagtagatg aagtgggatc aagtagttgg gggctgctgt atgaaaataa gccagcaccc
      601 agggtataat ggcactgtag aaagctgcaa ggtcaggc
//
LOCUS       KCPA01001680             299 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 184653tic ultra-conserved element locus
            uce-7679, sequence.
ACCESSION   KCPA01001680
VERSION     KCPA01001680.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 299)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 299)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="184653tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>299
                     /note="ultra-conserved element locus uce-7679"
BASE COUNT          101 a           53 c           57 g           88 t
ORIGIN      
        1 aaaaaaaggg agaggggagg gggaaaccag atctgaacaa cgaaaatgaa ccttgataat
       61 ggagcagcct tgaattccac ttcatttatc acactaatgg atgtcaagat gacctcaatc
      121 aaacattttg ttttccagtt ttaagcaatg gaaaatttta tttaaattgt tcctagtaat
      181 tacattagag tagaaggtca aagtcaatat gaaatagtat caaccatgag tcttgtccag
      241 gctttgctgg cacagttcac acatctccat aagcctagtg caagctttat gtttctctt
//
LOCUS       KCPA01001681             722 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 184758tic ultra-conserved element locus
            uce-6682, sequence.
ACCESSION   KCPA01001681
VERSION     KCPA01001681.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 722)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 722)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..722
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="184758tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>722
                     /note="ultra-conserved element locus uce-6682"
BASE COUNT          237 a          126 c          157 g          202 t
ORIGIN      
        1 ccaccagact ctgaaaactg gatgcaatag ttctcaaagg gttacaccac caatataata
       61 ccagtgtcaa ttttctcaat agcatgtctg ttgttttagt tcattgaaat ccacttcaga
      121 gtttttacca ttctttggaa tgagtgctcc tgacagacct ataaaaggcc tagttggctt
      181 ggtacagctt gggaaagata atgtaggaga aatcaaacaa accaataaaa aggttctgct
      241 tgaatatagt attgaatatg agtttaaaac attgaggaca tagcccagag cagctgtaaa
      301 aaacataaaa tgaatgtatt aaggctgtta ctatattgca gatattttgg ccccttgttt
      361 gttggaaaat ggctgtccga acagtctgaa gtcctgcgtg tcatccgagt ctcccacctg
      421 acaaaactgg aagtaggagt ataggactta tccgtagcag acagaaagca atcctctttg
      481 gagacaaagc tgttttgggt cttctcactt tcctgaaagt tccattgttg gttgttgaaa
      541 aaaacttact ttcagcaaaa aaaaggggaa caggccttaa ggggaaaatg tagaaacatt
      601 ggttattcct cttcgttagt taatcctgat agtttatagg gcattgagcg tgcagaggga
      661 aggcctagaa ttgaatgaca aagaaagaca aaggactgaa gaaacagcag atactgtgta
      721 tc
//
LOCUS       KCPA01001682             778 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 184869tic ultra-conserved element locus
            uce-1259, sequence.
ACCESSION   KCPA01001682
VERSION     KCPA01001682.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 778)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 778)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..778
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="184869tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>778
                     /note="ultra-conserved element locus uce-1259"
BASE COUNT          259 a          149 c          143 g          227 t
ORIGIN      
        1 tgggactctt aaaggtcatt tgttgaacag tttcttctag gcatatatga caaattattc
       61 ccttggcaca ataaacagga ctccagccct ttaattataa tatagcactc aatatcttta
      121 gacatttcaa catttcctgt gtatcctaca catttcatta caaggaaagg ttgaacagaa
      181 ttaaaagggt gacattacct aaagattgat agtttacctg tccaaaaggg aaggttgtag
      241 tacaagtgag cacaaaggaa agaaggatcc aaaccaagtt ttgactgcag aggagactcg
      301 gataagagag attttattat ccgcagcttt tagccttatt taccatcagg ctatcttgcc
      361 acaagcatgc tttttagttc tgacagctct gaattatgac cattgtggga tcctatctca
      421 ttaactgaaa tgggagaata aaacatcaaa caatcataaa aataatttgg cactgtgaaa
      481 ccacttagga gcagctgtca aacaggttgg aagataaagt tctaaataaa aagaatagaa
      541 agcgctgcaa tgtcctgcca tatgcttcct ctgcattata gactccttaa taatatgaag
      601 tgcctgtgtt tatgcagaat aggccagaca ctccatatat gatattgatt atgccttaac
      661 cccaatttag taaagacata ctcctccttt tcctaatcag atattgcaga agcagttttc
      721 tgaaaacgtc cctaatgcca aggcatattt tatctccgaa ggctgtggca ggagatag
//
LOCUS       KCPA01001683             553 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 184978tic ultra-conserved element locus
            uce-3731, sequence.
ACCESSION   KCPA01001683
VERSION     KCPA01001683.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 553)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 553)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..553
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="184978tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>553
                     /note="ultra-conserved element locus uce-3731"
BASE COUNT          168 a           97 c          103 g          185 t
ORIGIN      
        1 ttttaaaggc tttgaacaaa catatctccc catacttcta agggattatt ttacatattt
       61 cttggtggaa taaagaaatt cattcttcct gtcgcagtac agaaaggcta agaatatctt
      121 tcgtcacata tatactgtag gctgttgcat tattaaaaaa ataaagggag ggggtggcag
      181 ggtaggagaa agctgcctta gagattaagt ttccctttta tgaaatcgta tttagtctct
      241 ttttttaaca aatctaacaa caatgctcta cagccgctca ctgggaaata cctttaatgt
      301 taaatgcaga ttctgatttt cttggctaat gcagaaagcc tttctattga aatataaata
      361 aggggtttgg tatatcccac taaagccttt ccagtgaatg acttctgtgg gtttttcatg
      421 gctaccctcc atggctgtaa tgtgaggctt ttatcctact attgaaaact atccgctgct
      481 attaaaaaaa atatggaagg acactgcacc tttttatctc agagctgggc tcctaattga
      541 gaaagtatta tta
//
LOCUS       KCPA01001684             342 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 185077tic ultra-conserved element locus
            uce-6564, sequence.
ACCESSION   KCPA01001684
VERSION     KCPA01001684.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 342)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 342)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="185077tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>342
                     /note="ultra-conserved element locus uce-6564"
BASE COUNT           89 a           87 c           64 g          102 t
ORIGIN      
        1 gcctaagcct tcggacagcc gaacaggacc gcggtaagat cccctggaac tggaactgaa
       61 tcctgcctag aaagcatcta aaagcacgct tcatcccttt tcccttaaaa aaatattttg
      121 ttaaaaaaca ctatgatatg agggcgattg actatttggt ttcttctaag tagatgctct
      181 taaattaatg catataaata atttgtattt aacttcctcc cttcctgttt agcaaagcgt
      241 cgaatgcacg tttcccctga gtcacttgct cagtaccgag tctctctgcg tttcactgct
      301 taagacaaac tgtgcccctc gctctgcctt ggccatgggg ct
//
LOCUS       KCPA01001685             558 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 185186tic ultra-conserved element locus
            uce-4482, sequence.
ACCESSION   KCPA01001685
VERSION     KCPA01001685.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 558)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 558)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="185186tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>558
                     /note="ultra-conserved element locus uce-4482"
BASE COUNT          192 a          108 c           99 g          159 t
ORIGIN      
        1 aacagtaatt caacttgtgg aatagattca acttccagcc caaaagttta ttcaagttaa
       61 gaaaacacat cctcagatta aaaagagtat tgcaccactg tcaattttca gacgttgcca
      121 tcaggaaaaa aaaattacat ttcaggctga cgagcgacta atcaaggcaa gtgaaacggt
      181 gctgcaataa attactccgc agtgaaataa accacacaaa cagaccgatg ataataaatg
      241 taaattattt ctctgaagaa attttcttgg tatatgagta atacgaacca tcaggaagga
      301 gtcttcctta acattaatta cagaaaatga caagtgagct gatgactgcg aaggctcatt
      361 atctgagaac atattcacaa ctttgcaatt tgcgcgagat gtactcgggc taaattaatc
      421 tcccttcttt gcatgagcct cttctaattt tcatgttatt aacaggtttg cagtatcact
      481 cagtgcttgt cactctaatc aggtttcggc atgttcgcaa aagcgaagtg tcatttataa
      541 ggataagccc tcataatg
//
LOCUS       KCPA01001686             487 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 185292tic ultra-conserved element locus
            uce-5625, sequence.
ACCESSION   KCPA01001686
VERSION     KCPA01001686.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 487)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 487)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="185292tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>487
                     /note="ultra-conserved element locus uce-5625"
BASE COUNT          151 a           91 c          117 g          128 t
ORIGIN      
        1 cactgaaaag aatgtttatc tctgtgtttc ctccagttcg ggagtaaaat tagactctta
       61 aaacctgggg atggtgtgtc tttaattttg tttagaacag aaaataactg caatatgaaa
      121 ggtttaatga ggttagaaat ctaaaaggaa atggagtggg aatagattat caagagaaat
      181 aaagccaacc gctggagagt acactaatat taaatattag gtttctaaac caaatatata
      241 taatccattt agggacttaa tggtggttct cagaagcaca tttatctaca gcttatggtt
      301 caacaaccaa tattataact ccatttgtca ttgttaggcg agggggatgg atgtcaggga
      361 ggcgagggtc agcactcgag gaggagctcg ggagacgccg ctgctgcacc cagacggccc
      421 ttgaggggag ctcacctgaa cgtctctggc accacgctga agatctgccc tggaaacatc
      481 tcctcac
//
LOCUS       KCPA01001687             669 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 185401tic ultra-conserved element locus
            uce-4599, sequence.
ACCESSION   KCPA01001687
VERSION     KCPA01001687.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 669)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 669)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..669
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="185401tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>669
                     /note="ultra-conserved element locus uce-4599"
BASE COUNT          198 a          125 c          114 g          232 t
ORIGIN      
        1 ttgcatctgg tactgatgcc gtgtgaaatt tatttgttta aactttcagt cacacatgga
       61 aagttttgca gatggtgtct cttctcatct gttttttcca atttaaactc cagttcttac
      121 tctctcgacc ccccaatttg atttctcctt cttctaaaaa aaatagatct aatcagtagc
      181 atgttaaaca agaggggatc ttttatgtat tctgtgttag gacaaggaaa gcatcgctgt
      241 agatcactag aataaacaac tcaggctgat tcaattacaa tgcctgggcc aggcttttat
      301 ctgctggtga catcatttca atcaaaatgt aaaataatac aatccaatag atgcaagagg
      361 gagagatagg acacagactg ctgcacttag tcatttaata aaaaaaagtg gaagaaagct
      421 ctttctgaca ggctgctagg acttccattt ccaaaactct attaccttgt ataatagtat
      481 tcaaaagaat tgaatgcagg aaattgtcta ttacttttta ttagtagaag ctgttatgta
      541 ggatacagcc tactgcactg ttttttcttt gttcctttaa ttaacaagag catgaaatcc
      601 tcctattggc aagcacttgt tccttctgtt gccttctgtt tttactgaaa aggtattctt
      661 ttctattct
//
LOCUS       KCPA01001688             474 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 185510tic ultra-conserved element locus
            uce-7195, sequence.
ACCESSION   KCPA01001688
VERSION     KCPA01001688.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 474)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 474)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="185510tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>474
                     /note="ultra-conserved element locus uce-7195"
BASE COUNT          156 a           91 c           82 g          145 t
ORIGIN      
        1 ttttagtaaa taaaaaagac tgccactttc catcatttca caacacctag aaagacagta
       61 aaatcttcag agcgatcaca tctttctttt gctggctctc acacacgttt cccctagaga
      121 agcagatgtt tgacttgtct catgtaaaag gcaaaaattg agttacagct tcagattgca
      181 agatttgcaa tgtttgctac agtttattaa tgttaaccaa ataaaaatga cattagtgaa
      241 aaagatctac atgatatctc agaacgccca agattaggcc agatggtcac ttctaactga
      301 tataatctag taaactctgt tgagagacag gctattgatt gaatttctgc ctttaaatgc
      361 aagctccata tctgcacatg tccacagtga tatcagttgc ttgaaatcca atacagaggt
      421 gtagattggg agatgatgtt agttgctacc tattaaaact gtcaattcca tctg
//
LOCUS       KCPA01001689             781 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 185621tic ultra-conserved element locus
            uce-2980, sequence.
ACCESSION   KCPA01001689
VERSION     KCPA01001689.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 781)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 781)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..781
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="185621tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>781
                     /note="ultra-conserved element locus uce-2980"
BASE COUNT          248 a          161 c          140 g          232 t
ORIGIN      
        1 agaaaactgc ttgtagtaca ccaagttcat ggttgttgtt ttcagaaact gagtttactt
       61 agtgtacata ttttccaaca acgaatcctt tcagcattat aacacctgca ccatgtcact
      121 gtgtattatg aactctagat cagccccacc tcctgaaaac tgaaacaaaa acaaaacaac
      181 aacacaggcc agattctcta cttcagtgaa catttattac aatttgagtt gtgaataatg
      241 cagctaccaa gccccagcta ccttatgctc caggctggag tctttaaaca tcagtgaaaa
      301 aggcttgata tgctctcttc tcaatttatc gccactccgt aagtcgatgg tgtgctctat
      361 tcgcttgtta atttcctcag gcccagactg gacatgcaaa gcttgtgcaa gatggtttgg
      421 aagcagattt attgaatttc ttgttagggc agccagagtc taggggaaag cacatgcaaa
      481 cagaataaac ctgctggtcc ccttgggtta aaaatgcaat gttttagttc atgttgcatt
      541 gcaaaccatt agagcattcc atgcaattca ttcaatgaaa tctatagaag tgtaaaataa
      601 tttccactaa cacatacagt atgttagcat tttaatacct tacaggctag gaggtttgtt
      661 gctacaagca ttaggactat attctgcttt gcaaatctga tatttaatta ttaaagcaag
      721 catgcacaca ccaaaatcac agcagtatct gactcaacgg tgtgtttaaa taagaatgga
      781 a
//
LOCUS       KCPA01001690             606 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 185732tic ultra-conserved element locus
            uce-3083, sequence.
ACCESSION   KCPA01001690
VERSION     KCPA01001690.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 606)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 606)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="185732tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>606
                     /note="ultra-conserved element locus uce-3083"
BASE COUNT          190 a           96 c          113 g          207 t
ORIGIN      
        1 tttttaattg accactttac aaataaaaat gaactgcaca aaaattatgt ttttccacac
       61 ttttagggtt tattaaatga tcttgtcagc tcctggagaa aacccagtgt ttttcagtta
      121 gagtttttcc ctgttgaaaa ttgcctgttg tctttaaaga actggtccac tgaacttagt
      181 acagcgtctg aggtttcagt gagaatcctg tgattaatga ggtagccatt aatgtcagta
      241 gattgaacaa ctgaaatctg attatattaa agtgcttccc aaacattagg gtcacattaa
      301 cagtttattg aaacaagctg ataaaattta aaatggtcat ctaattccct agggttctta
      361 attgttgcat gataaatcac tctgtagaga aatctattac aatgttccaa atgtgaaaat
      421 gttttactgt accattagtg gggtgtttga agcacatcag ttatttcatg ggggagtttt
      481 gccagaataa gacaaaactc tgtatatgga ggttttttcc tttagattga gataatgcac
      541 tggccttgag ctgcctaaat tataaacatg agacatttat agacagatca tctgacagtg
      601 acttgc
//
LOCUS       KCPA01001691             674 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 185843tic ultra-conserved element locus
            uce-6088, sequence.
ACCESSION   KCPA01001691
VERSION     KCPA01001691.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 674)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 674)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="185843tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>674
                     /note="ultra-conserved element locus uce-6088"
BASE COUNT          155 a          160 c          150 g          209 t
ORIGIN      
        1 agcaggttca gagtgtctct ttcaagcagc tttgaagagg gaagatctcc tctcctcctt
       61 ccccactgcc cctctgcccc agctccttct ccttcctgcc tgggagtaaa cagtagatgg
      121 tacatgtatt aacactaaca caatgctcct gggcgtgctc tgtgtgcaag tccctggcag
      181 ccgtaaatta attaaaagta gacagaaacc ctaggaaaaa gcaagttccc ttcctgcccc
      241 tttttccttt ctctctctgt gggtaaatag ctaattcctt tgttccttgc tgcactattt
      301 catttctgcc atcattgtcc tcattgttct ctgaaacagg aggggtctgg gccaggagca
      361 gccaaggtct tggctaatga cgggaagtct ttaaagtttg cgctgcattt catcttctct
      421 gtgggagttt taggacgcat ctagtgtttg atccccaccg tgcaactttg cttctagtta
      481 attaacagat ccccattaca ctctctcatc tgcaagcaca tgggaggcct atcaggaggt
      541 aattcaaggc caatctgagt gatggcagaa attagagaaa atggttgttt tagggttcta
      601 acatcttttc agaggtgccc tgtaaatttg ggcttgtttt gttgttgcaa tcagatctgt
      661 tagggagtag atag
//
LOCUS       KCPA01001692             419 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 185949tic ultra-conserved element locus
            uce-4259, sequence.
ACCESSION   KCPA01001692
VERSION     KCPA01001692.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 419)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 419)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="185949tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>419
                     /note="ultra-conserved element locus uce-4259"
BASE COUNT          119 a          106 c           78 g          116 t
ORIGIN      
        1 atacagttta gctaataact ggttggggcc aatccttaac aagtcacata tttccattgt
       61 cccttcaccc cctgcttatg cttttaccac atcctaacaa aaacatgacc agaactggtg
      121 aaaaacatac ggttccaact aatgaatcac atactttccc gcaagtgcag taagtactac
      181 cagctgtgac agtcttgctt tggcagtgga accagtgcag aacaaggccg acacatctga
      241 aaccagctgt actgaaaaac cacaagcaat ttaagtccgt ctgccttctc aggggcttct
      301 ttgtctctgt ctatgtctct gctctgtccc taaaacttgc cagccatgtt gttttgacag
      361 agttcagagt ttcagaagtt tcaaggaaaa tccgctgatt caggaaactg cgtttcaag
//
LOCUS       KCPA01001693             340 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 186052tic ultra-conserved element locus
            uce-803, sequence.
ACCESSION   KCPA01001693
VERSION     KCPA01001693.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 340)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 340)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="186052tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>340
                     /note="ultra-conserved element locus uce-803"
BASE COUNT           99 a           58 c           74 g          109 t
ORIGIN      
        1 ggggcgggtg ctggtgaaat tgttttgctt tgtatttatc tttcagtgtt ttcccgatgt
       61 ttgcataaag tagatgcaga ctacaatttg gtgatgaatt ctatgaatac taatcttagg
      121 ctacccttga ccctagggtc agctaaagat caaaaccaaa ccatttaata ttttcctttt
      181 gcagatcaat agaagcataa attcactctc aatgacaact ataatttcaa acagatctat
      241 agaaggcatg catgcatttc caggatgagt ggctcatgcg cctgttgggg agaacaagaa
      301 aaagagtttc tctgttgttg tgggtttggg taccaatgaa
//
LOCUS       KCPA01001694             748 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 186166tic ultra-conserved element locus
            uce-3668, sequence.
ACCESSION   KCPA01001694
VERSION     KCPA01001694.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 748)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 748)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..748
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="186166tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>748
                     /note="ultra-conserved element locus uce-3668"
BASE COUNT          229 a          118 c          152 g          249 t
ORIGIN      
        1 agtctgttac taaagaattt taagatacag tggagatgtg aaaggcacag aagattttca
       61 tttcctgtgt tatagggtgc aaataatatc agtatgaaaa acctggcagg aagatttaag
      121 atagcagttt ttacattgat aagtatttgt tcatttcctg acaacaaaaa atataaatct
      181 cttcagaaat taaataccct ggcttgttga agcacttttg tgacgttctg tggtagactg
      241 gcttcctttc attggaaatc cacagctaga ataataatca cagcatcagt tattatactt
      301 gtatcagttc tgtgctgcaa gaggctaata cagtgtatgg ccgaattctc ctacttttgt
      361 gtcacttatt ttctctgtgg gccagatttg cattttaatg gaagtagttt atagacttct
      421 ttgctgcctt catagtgcca caagtggcat cattaagtga gttaagccgg attaatgctg
      481 atagtaaagt cagataatac aataacagag gccttcattt ccatttggat taggtgaaga
      541 gagcaggcct gtctggtgca gggtgataat ttgtaagcgc gatatgttgt acttgagagg
      601 ataagattaa atttagtggg tttaactgtc atcccagtaa gtcaattact tcatcttttc
      661 aggctttgaa tttattttat aaataaaata aatggaatat tgagctgctc cacagccatt
      721 tcgagcttcc atgaagaaga attacaca
//
LOCUS       KCPA01001695             689 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 186274tic ultra-conserved element locus
            uce-7495, sequence.
ACCESSION   KCPA01001695
VERSION     KCPA01001695.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 689)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 689)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..689
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="186274tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>689
                     /note="ultra-conserved element locus uce-7495"
BASE COUNT          221 a          110 c          123 g          235 t
ORIGIN      
        1 aatgtgtgtc tcgcatattt atctcactct ttcactgaag gcatttaaaa ttttggcttg
       61 gcttatggat gtttgctctt ggtgttagtg taatgtccat acatctaatt gataagttat
      121 aatgcatttt ttgtagcttt aaccagtcat ttaaaataaa taagatcata atgatcagtt
      181 tccatttacc catttattaa ataacaatgt tcacactgag cagtttgatt ttgtgttaca
      241 ataaggcagt ctctacatga tgacagatgg tgtttcattt tgccgacact gtgctaaagt
      301 gctgtgagtt gtgatgtgtt tgattttatt agagatcaga tttaacacat gcattctaca
      361 taactgcaat agcattccca tttctcatct gtaggagaaa atgaaactgt gatgaaatgt
      421 aatatactca ccctcaggca gaactagtgg gattgggaat tgcaacataa taaatctaat
      481 ggatattgca ctacaggaca ctagaaattt actgttatta tgttcaggga aggaacttgg
      541 ttttgtaaaa ctcgctttta tttcactggc atcagtgcaa tttcacatta tttaaccatt
      601 atatcccaac agtttgctgc attgaaaaag taacctaagc tcagaggaac agaggagtaa
      661 aagaactcaa aaatacaaag tctgaataa
//
LOCUS       KCPA01001696             551 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 186384tic ultra-conserved element locus
            uce-2670, sequence.
ACCESSION   KCPA01001696
VERSION     KCPA01001696.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 551)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 551)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="186384tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>551
                     /note="ultra-conserved element locus uce-2670"
BASE COUNT          132 a          113 c          100 g          206 t
ORIGIN      
        1 aagcatttcc ttgtggaagg cactgtggcc gtgcatttcc agctttggaa gccattcctc
       61 ctcttgctct ccctgctgtc aatccagagt gtctcaaact tcatttgcgc tcatttcaca
      121 cagagtttgc ttatcagtct gaaaggcgac tgtctgatct ttccttttgc atgctttcac
      181 ttttaagatc ttccctttct tatgtaaaaa aggcaattag agtcgtatct gtttatttta
      241 aacaaaatgg ctgttaatta gcgtgatcaa aaaccctgcc attgtagact atgggcttca
      301 ctttgtagtt gcactaaatt gcgtacagtt tggtgccagc tgacatgata gcaacacaaa
      361 gtctgctaac ttaatgaaca aacagattta tgaggctttg ttatcttctg gtttagatct
      421 ataagtttgg aatgcattat ttagagttct tgtttcttaa tgactaatgt catgttgtta
      481 cttattaaga gtgctttaac ttgctgaaga agtttccctc gcttttgtat ccccttgttt
      541 ccattttcct t
//
LOCUS       KCPA01001697             702 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 186496tic ultra-conserved element locus
            uce-6699, sequence.
ACCESSION   KCPA01001697
VERSION     KCPA01001697.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 702)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 702)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="186496tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>702
                     /note="ultra-conserved element locus uce-6699"
BASE COUNT          200 a          143 c          144 g          215 t
ORIGIN      
        1 actgttttcc ttgctgattt taaagcagta aatccttcca ttatttcctg gctatccaga
       61 ccttatgaca cagtatgtcc tgtgctgtcg tatgtgtgag aaggcttttt atggggagca
      121 atcaggctgg accccaatct ccagtgcagt gtttttctaa ttaaattgtc agtggaagga
      181 atatccggaa cagcagtttt cattttcaat cgaggaaaaa acattatgag tctttgtcat
      241 ttgattaaaa gttacttaac ctttaaattg ctacagatgt aaagatagct ctgagtttcc
      301 aatgtaatcg cctccaagtt aaaatcagga aaatctttgt gtaatgaaac ccatatgtca
      361 tagtgaaagg atgcaaagca ctggcagagt gggctgctct agcaggagat tctgcaccca
      421 atcttgttag ccaggactgc ttttggtaat ccctcatctc ctcacttgta ggaaatcaat
      481 ctgtactact gaatcttttc aaccagcaac tacaaaattt actgtggaga ggcagcttgg
      541 ggacaattgt agtaaaaacg gagcctgagg caacaaggct aaatgtggga ttgagggatt
      601 gaagttctaa agaggagatt atattaaacc ttgttctgct cccctatcaa gtagaaatgt
      661 ctcctcctcc ttttagcccc agcctttcct atccagtacc tg
//
LOCUS       KCPA01001698             561 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 186600tic ultra-conserved element locus
            uce-1581, sequence.
ACCESSION   KCPA01001698
VERSION     KCPA01001698.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 561)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 561)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="186600tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>561
                     /note="ultra-conserved element locus uce-1581"
BASE COUNT          180 a          118 c          116 g          147 t
ORIGIN      
        1 gcaggagtca tattgacacc ctagtgcatg gtaactctac tcctttattg acatgttgct
       61 agtcaggagc acaatagcgc tctgtgtctg caaatcattg ctaaaatcat ctcaagaaaa
      121 aaaaagtttg aaagcccaac gcgagacaaa ggccccagag ctgcactgcg ccgctcaaaa
      181 ctcccgagtc agcaacttct attgattaaa aactaacctt taaagtaact cgcagagtgt
      241 gtggttagca tttaaattta aacatgtcat gagttgattt gtgttactga ataccaactc
      301 cgaaggagtt acattcacat cagatttttt ttctaattcc cttaagcagc taaagtattt
      361 catgaaatgt caatagggca ggggggaaaa aaaggtgttt tggagggagg ggactcgcgc
      421 ccagcctcgc cgtttctttt cccatgcaaa tagtcacccc aaaaagaaaa gtgtggggag
      481 cgacacacaa taattagacc tttgtctaac tttcccaagt gccagagaaa gacagattaa
      541 ttaaatatac aacagtgttg g
//
LOCUS       KCPA01001699             569 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 186710tic ultra-conserved element locus
            uce-6048, sequence.
ACCESSION   KCPA01001699
VERSION     KCPA01001699.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 569)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 569)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="186710tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>569
                     /note="ultra-conserved element locus uce-6048"
BASE COUNT          161 a           96 c          105 g          207 t
ORIGIN      
        1 cagcttttgt ttggatgtaa ctaaaagcaa gcaccactat aatatgccta taataagggt
       61 catagatggt tagctgattt tgttttgttc ctaatgtatg ggtactccta atgattccat
      121 tagagttcaa atagcagaat tcagcacaaa tgtatttcta ctgcgcagta gaaacacaat
      181 ttctctggaa ctgcagctgc tgtagtcaaa gattagtctc tttctatccc ttagggagat
      241 gactgtctct gccagctgac ttagttttta tactgccagc aatttattag attgcttttc
      301 tcttaagtgt gataataggc cttatgctta gcaaggttta gagacttcca gtgcattaat
      361 attttatggc aatgacagtc aagacacatt ttgtttacct aacaagacaa gccagctgat
      421 gtgtactgga gattagattt aacttaggaa ctctgccaat tatgtcttta atgctttgca
      481 atgatattta taattgtaat ctaacatttg atgcatcagc gttttgtttt ttatgtgact
      541 caggttttta ctcagttcta tggataaat
//
LOCUS       KCPA01001700             581 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 186818tic ultra-conserved element locus
            uce-4566, sequence.
ACCESSION   KCPA01001700
VERSION     KCPA01001700.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 581)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 581)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="186818tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>581
                     /note="ultra-conserved element locus uce-4566"
BASE COUNT          177 a          107 c          113 g          184 t
ORIGIN      
        1 ataaataaat atgcatattt aagggatggc tttgcacatg aagaactttt ctgttgcagc
       61 ttgttcacct gattttagtg aaatccttcc ataataaaaa cttgtccatc catgctcatg
      121 gtttgattca gtacagtggt aatttaaaac tggtaaagag ttgtattctt atttgacagg
      181 ccggacctga tagacatgaa taccgttgct gttcaaagca accttgcaaa tttagaacat
      241 gctttttttg tagcagaaaa acttggtgtt gccagacttc tggatcctga aggtaagaga
      301 gctacagatg gccccccaac actaaaataa aatccaatgg ctgtagcata tttgtgggca
      361 ttcttacaac tacgtgataa aacactgttc tgtcttgctc ttctagacgt cgatgtttcc
      421 tcacctgatg agaagtcagt aataacttat gtgtcatcac tttatgatgc gtttcccaaa
      481 gtaccagaag gtggtgaagg catcagtgca aatgtaagta gaacacttgt gtacattaat
      541 aaaattctga atttcagatc cagaatgtta gctagatctt c
//
LOCUS       KCPA01001701             497 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 186929tic ultra-conserved element locus
            uce-3894, sequence.
ACCESSION   KCPA01001701
VERSION     KCPA01001701.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 497)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 497)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="186929tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>497
                     /note="ultra-conserved element locus uce-3894"
BASE COUNT          141 a           94 c          101 g          161 t
ORIGIN      
        1 aaaaccaagc tctggaggaa atgctctggt ggaaatttaa gcacaacctc agactttaca
       61 aagaggccgg gagttgttag gctccttaaa tgtgtgggaa acttgttgaa cgtttcttct
      121 ttgaaaatgg aacactatta ataatagttc cattgagcga tcttgccatc tgtgagacat
      181 taacccaaag accctccttc tcttttcagg ctggacaatt tgcttaatat ggcctatggc
      241 gtaaagaggt aattagaatt ccacagattg ccagatgtcc gtgttggcac agattggtgc
      301 tacaattttt ttttaattca ctaactttac caccagcatg taaaattctt tttaagtttg
      361 gacttcagtt ggttttgtta cttttcacgc gcaagttcat ttacaggtgg gcttctcaaa
      421 tggtttaggt gccacagctt aagtggtgcc agaatcaaaa ctattaactt gaaacatatc
      481 tctgatctga taatgga
//
LOCUS       KCPA01001702             608 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 187138tic ultra-conserved element locus
            uce-777, sequence.
ACCESSION   KCPA01001702
VERSION     KCPA01001702.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 608)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 608)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="187138tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>608
                     /note="ultra-conserved element locus uce-777"
BASE COUNT          201 a          104 c          134 g          169 t
ORIGIN      
        1 tttttccttt ctctacaaaa aatgacagaa aactaaagca acctaggagt cttctaaagc
       61 tagttgcagt ttcagaaact aggtaaaaga atgcttttgt aatagatttc atgcagcagt
      121 tggcattggc agtactgcaa aaagagatgt attctgtcgt gctctgtttg atcaagtgct
      181 aaacccgtgt gatcaataga gagacagatg tcgggtgcag atggcgatgc cgtgatacct
      241 ggggcagagt gggcctgcca gaatgacaga atgggaacaa ggaagagcag caatgcaaca
      301 gaatgtgaca aatgaaatta gggtttatac tagtcgataa tttacagcta atagaaagtg
      361 acagaatttt tcagcataca gcacatttac tctcgcagta ctatagtcaa tgcatttttc
      421 atgcaaaaca atgggagctg ctttgaggac ttggctgtag ctatatgtac tttgttatgt
      481 tgcaacttgt acaactgata tttaaacaaa gctagtaaca tcaaaccaag taagcaccaa
      541 gtgtatgaaa caagattgta ttttcaaatt tgaaatgagt ccatctgatt gtgtagcaga
      601 cctccagc
//
LOCUS       KCPA01001703             809 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 187251tic ultra-conserved element locus
            uce-1904, sequence.
ACCESSION   KCPA01001703
VERSION     KCPA01001703.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 809)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 809)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..809
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="187251tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>809
                     /note="ultra-conserved element locus uce-1904"
BASE COUNT          246 a          141 c          175 g          247 t
ORIGIN      
        1 tttctcaaga aggcatgcag gatttaactg agtgtttttt aaaacacttc aggtctgttt
       61 ttatgatagg ttcaaaattc tcagcggcta tcttgttgtg tgacaggagt ttacagcatt
      121 agtttcacca gacaaggact ggtggagtaa aattagtcat gtatgtaaat tataatcatg
      181 ctgaatagtt gtatgtgctc atttagccat tttaacagtg tgtgatgtta tcctctctgc
      241 aggactaata agcattagcc ataatgaggt cagtcagtca gtcaggcatt atcatgggat
      301 ttaattggga cactggtctc tgctgaagtg aaaattaata acttttgtca atgttctggc
      361 gaaatgttct gtcttattaa actatgaggg tcaattagaa agcattatgt aataaagtcc
      421 ccagcagcag aactcaaatt gagttatacc acagtcatta ttccaggacg attgcatttg
      481 aaaatggaaa accagcatgc catatggagg gcgcaggtta tatttacaag cattgcatgt
      541 taaagcttcg gcaagaagga aacaattaaa tgtaatactg aaataaatca aagcactgaa
      601 agtgccatgt tgtgccaggt gcttaatata gccagcataa ccctagatgc agctaggcaa
      661 aatggcacct gtttataagc cttgtttggg ttctgtcaga caacgtcctc cctctggatt
      721 gctctgatga ttcaaagtct ggggcacacc tggaaggctc agccaggcac gttgactcat
      781 ataaataaca gtttattgta tggctatta
//
LOCUS       KCPA01001704             741 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 187361tic ultra-conserved element locus
            uce-7576, sequence.
ACCESSION   KCPA01001704
VERSION     KCPA01001704.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 741)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 741)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..741
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="187361tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>741
                     /note="ultra-conserved element locus uce-7576"
BASE COUNT          212 a          159 c          143 g          227 t
ORIGIN      
        1 aaaggtaaag agggaaaaag tgttgtttat agaagccagc tgctctggct tcggcgccag
       61 cagctcttca tcctgctatt ttacgctcgc aacccccact gcccccactg gcacaggtac
      121 aactaaatgt tgacttcaat gcttcagaga gcactcaact gattctgtac atgattaatt
      181 gcccaagaca tggctgacca tatggaacag agaaagcatc aagtaattca tacttctgta
      241 tatgatcatt tggcccctgt tgttttaatg tacaggaaag agctagtata gcacagacct
      301 ggtgtcttgc ccttgacagc ccattaagaa atctcaaagc acctagttga agttatgctg
      361 ttggcttttc aatagcagcc taataaaaca gaagcaaagc tttccaacta gtcttaaatc
      421 tttcacatac agtacattaa ccactgctgc tacaacaact ggtttcttat gataggaaat
      481 gggatttgat ttctagcctc tgcatactta ctgaaagcct ttttctgacc tttggagggt
      541 ttacaaaatc attgttcgtt tttcctgcca ttttcccagt ttcttgccat ggtgatccta
      601 atagatttgt ttaaggttca gtacattcta ctcttactag ctgttatatg caaactgtgc
      661 gatgaaggtg ggctcatggg aactgaaagg aaagaaatta ttattttctt tctgagattc
      721 agagaagtca ctgcaacatc a
//
LOCUS       KCPA01001705             566 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 187471tic ultra-conserved element locus
            uce-7370, sequence.
ACCESSION   KCPA01001705
VERSION     KCPA01001705.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 566)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 566)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..566
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="187471tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>566
                     /note="ultra-conserved element locus uce-7370"
BASE COUNT          179 a          115 c           89 g          183 t
ORIGIN      
        1 cgccccacct tccacagaaa tgacctaaac tttgtcaggt tcacatgtcc ctagagatga
       61 tctcatttca ctgcttcaaa agagctttgg tctgcacagc ctgtagcagc aaatttacac
      121 ttcaaaaagc agacagcttt ttccacatct tattcactta atgggtgaga atgtaaaatt
      181 agttccgttg ctgatgagga ccttgagcca aatgaaaagt gttcatttgt cagcacagac
      241 ttacagccta aaacatgatt atatagctaa tccaataatg gattttgatg ctgagcattt
      301 atttatatac agaatgtctt gttatctgtt gataatcagg ctctgcaatt tactctcttt
      361 tgtgtcatta gccatagcaa catcttccag acatattaca tttgtgtgtc aacatacaaa
      421 cacacatcct gaccaaaatg ctgtctttgc cagcactgga atttgagctt ttaaaatatt
      481 agtaagaaaa gaataatgag aacctctctg catcttagaa gtcttaacag attaaaattt
      541 gaaacataaa ttttgtttcc ttatct
//
LOCUS       KCPA01001706             455 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 187579tic ultra-conserved element locus
            uce-4609, sequence.
ACCESSION   KCPA01001706
VERSION     KCPA01001706.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 455)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 455)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="187579tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>455
                     /note="ultra-conserved element locus uce-4609"
BASE COUNT          150 a           96 c           87 g          122 t
ORIGIN      
        1 tttggtgaag gagacgtgtc ttacactttg ctaacattat agccagattt cacagtcatg
       61 ggaaaacaaa acaccccaaa tggagcagtt attaattcaa taaatccagc tgctttcagt
      121 gctctgggca aaaggcaaag ttaaaagcag ctgcttgttg acgacatgtg cgacctgacc
      181 aggggaaggt agctgtttta gcacatcatc caccactttg aaggctgact gcactcaatt
      241 tcttagacaa tctacacacc attttcagtt ctgtacctcc ataatttatc acaacaatac
      301 ctcaagcata cagattcagg gcgggggatg aaagcaattt acagtataaa gatgaaagaa
      361 gctggatggc tcaagaagac ctactatgta aatcatatcc acaacttaaa ggaatgtagc
      421 cataatattc tggaattaat ttttccagca ttcct
//
LOCUS       KCPA01001707             632 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 187686tic ultra-conserved element locus
            uce-5810, sequence.
ACCESSION   KCPA01001707
VERSION     KCPA01001707.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 632)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 632)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..632
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="187686tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>632
                     /note="ultra-conserved element locus uce-5810"
BASE COUNT          203 a          131 c          117 g          181 t
ORIGIN      
        1 ttttcacagt gccatgtggt ttccagtgta cacaaagtaa agagtgaaaa ggtaaaaata
       61 aaacaggcat acccttaata tattccagaa ttcataaatc atttgtaaat ttagtccttt
      121 tataaaagaa tccttatata aattgggggg agggagggca tcaatcccat atatgaagca
      181 caatttaagc ccaacatcac tgaccaatca aaattagtga atgcactgca tctctctgca
      241 gtgaggagaa gcgacaaggt aggctgtcat tctgcaaaag ctgcccatcg caagctttcc
      301 tctcagaagc actgctcttc gtttttagaa agcctgaatc tcagtggtgt ctctggagac
      361 aagaagcctt cagtatgtta aattactttc attatgtatt ttcagatgct tattgattct
      421 accgtaggaa gagtgggaga ctgcagcagc ctgtaaacca gaactaaagc aattgtatac
      481 attagcagta tgctgaaaca atggcacagt acaggcacaa attttcatta aggtcatttt
      541 ttgaagatat gcttattacc ctctttccct tctactctgc taacaagtga acaaaatgaa
      601 tccctccaac ctggaactgc ttcacctgca tc
//
LOCUS       KCPA01001708            1050 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 187796tic ultra-conserved element locus
            uce-1278, sequence.
ACCESSION   KCPA01001708
VERSION     KCPA01001708.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 1050)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1050)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1050
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="187796tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>1050
                     /note="ultra-conserved element locus uce-1278"
BASE COUNT          282 a          194 c          205 g          369 t
ORIGIN      
        1 ttaatttgat agactgaatt caggatatgg gaggagggag ggaatccgtt ttgaatctca
       61 cgacgaccac accttaactt ttcgcgttta tgagagcgct tctgctacct gtgcagcagg
      121 agttaaaaat ctcagaaatt ttttttctgc atttgaattt gaaagtgctg aagcagtgaa
      181 tactgtcaga taagtaaaaa tcgtttgtgc tttgttgttt ttctttttgt gtctccttaa
      241 tgctttattg tggtcttaag tcccttttag catttgcata aagttcacga tagatccctc
      301 tttaatgacg tgccgatcat tagatacctg tgtgtcaata acatgctctg atgctatgtt
      361 ccattgacag tcacaccgtg cccctccatc tgcttttgtt ttgaccctat ctttgaactt
      421 tatcttggtt gctggccagt agttttccct ttaattacaa gaaggaaact gtcaataaaa
      481 tctgttaaat gggatgcaat gagtggcttg aatgggcgga cggctatttg ttcaaattct
      541 gcagcattca aggtattgac agtttgtttt ctggggccat atgtgacgat caatctcagg
      601 ctgggctcag ccgcgctgaa aaatgaaaaa ccagattgct tttgcttact tgtggatgac
      661 gacttgtgat ttggcgcggt cctagtgaga tgagaccttc tgcccaaatt gcccccctga
      721 gagccaggac gcgtgactgt ttttagaaat aattttttaa ttgattttgt aattaacagt
      781 tcatctacaa tattgatgca tgaatcctca gattgatagg agggaaattg ttttcaacaa
      841 tgaagttgta ctttcctatt tatctttgta atgtgattta gcactctgca tttttaattg
      901 gaaatataat tccaaagcca aaatgcttat tagtttcttt gtaaatattc tccaccccac
      961 taactctgcc cttaatttta gaatattatc ttattccaga aacaaaatgc tgaaatgcct
     1021 ctcaaagatc aaaattattc ttaattgaag
//
LOCUS       KCPA01001709             758 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 187906tic ultra-conserved element locus
            uce-2079, sequence.
ACCESSION   KCPA01001709
VERSION     KCPA01001709.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 758)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 758)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..758
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="187906tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>758
                     /note="ultra-conserved element locus uce-2079"
BASE COUNT          211 a          161 c          146 g          240 t
ORIGIN      
        1 cggctgcttc agaaagtgtc agagtaagca aagaaacctt cactccccaa tcaaacttac
       61 ataaactttg cacaccactc ttggacgttt ccattcttgg ctcacattca tgcagaagaa
      121 ttatttagac aagctccaat ttccccagtt tggaatggga gggaaaatgt atggtgctgc
      181 caggcagaag attatatctt cgttttggtg gaggtttcag gctcttcaga gagcctctgg
      241 ttgtggctgt cactctctgc cacactcaga ggttttttta ttgtccctgt cagttagcag
      301 cccaaggtta ctgccagctc tctgtcagtg ctttgatttt tgtcagctat ggccaggtcc
      361 ttttagttat ctgctatctt ttcagctttg ttcagcctga gctctacttg tctactaatt
      421 agctctttgg agatttccct tttaaaactc actatcacag aggacaggaa ccgttcaaaa
      481 gttttgtgct tcatagaaat tccatattca tccacatccc atacagccat ctttttaaaa
      541 ttaaaagtgg caggtcaggc caatttaagg tatataagca gcacagcctg taaaaagata
      601 cctttaggtt cttgatcagg tatgtagatg catgacagaa aaagaaaaag gtttccactg
      661 aaaggaccaa ggtgtacaaa taaaaaagaa actatcattc tgtgtaacat attctcattt
      721 tctttatctt ctagtgtgca aatattgtgc tagctgaa
//
LOCUS       KCPA01001710             578 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 188014tic ultra-conserved element locus
            uce-362, sequence.
ACCESSION   KCPA01001710
VERSION     KCPA01001710.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 578)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 578)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="188014tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>578
                     /note="ultra-conserved element locus uce-362"
BASE COUNT          199 a           87 c           94 g          198 t
ORIGIN      
        1 tttctaagaa gtttcaattg ctaaaaagta tcctaatcat atatatctga aactgattaa
       61 aaaaaatcag taaaatgaaa caaattgctc ataaatcaca ttaataagtg gggttttaac
      121 tatctgtagc atgtagaata ttaacatctg atgtgcctat gaatagtcat tcctactagt
      181 atacattaaa tgttgtaatt ggtttaaatc agcataggcc atctgtcttt aatactctta
      241 ttacaaggca gtaagcagag aactattaga gctgcagtac aagctgtaag atctttaccc
      301 gttcttaaat catttaaaaa taatgagagc tttagccttt atctaattaa cgagtgcctt
      361 ctttgaatta gaaaaactgt atcatttagc ccacggttgt ttagtaaatt ggcttggtgg
      421 catgtaagct aatgcagggt agcagttgca gtgtcttgtt cctggcttct tattacttga
      481 attataattc aatgatcacc ttagatcatg ggctattcat aaatcagaag cctgacatca
      541 gatgaaaaat tgtattaata tatgaaactt attatata
//
LOCUS       KCPA01001711             682 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 188123tic ultra-conserved element locus
            uce-5296, sequence.
ACCESSION   KCPA01001711
VERSION     KCPA01001711.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 682)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 682)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..682
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="188123tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>682
                     /note="ultra-conserved element locus uce-5296"
BASE COUNT          220 a          108 c          127 g          227 t
ORIGIN      
        1 tttttttctt atggaaagta tttacatgtt tattttaagc ctaacataaa tgtaaatatt
       61 ttaaacaaac aaaaacacac cagggtaaca atagagtatt gtttttttat gttgaataaa
      121 aactgccagg acagtgcatg tatattttta aacatgctgc ttcaaaaagc aggatgcaag
      181 ggatgttgca tctttaattt ttctgttaat tatggattga gcattgttgt gagccttgtc
      241 ctcaaaaccc agctcagaaa ataagagcag atgctcatac ccaggtttgg ctcatgtggg
      301 aattgaacag aacatattgg tttataatta atgtaatttg ttggattatc ttttgtgaag
      361 gagctaaggt aaacaacctt gcagcattgt agtgaaattc ttctgcgctc agagcctcta
      421 tacttgatgg aagatgaccc tacccttcct cctggattgt gggaagattt ggaaatgtct
      481 gtcacattca aacatatttt aattaactca aaggaaagaa ttaggctaca gaccctaaag
      541 caaattacaa atagtgttta aaatcagcgc taatgattcc ccaattgact attctgatta
      601 gcaaaattct cttttctagt ttgctgtaat tttgttatgg agcaaggatg gagaaagaac
      661 atgcttttct gccctgaaaa tg
//
LOCUS       KCPA01001712             965 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 188234tic ultra-conserved element locus
            uce-783, sequence.
ACCESSION   KCPA01001712
VERSION     KCPA01001712.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 965)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 965)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..965
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="188234tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>965
                     /note="ultra-conserved element locus uce-783"
BASE COUNT          289 a          183 c          199 g          294 t
ORIGIN      
        1 aactcagaaa gactatttgg aaaggttttc atcaaagtga ttttctgcag atagctcata
       61 ggtgatcagg atacccactg cttcaccact tcaaatattt atcatatata tgtttgcttg
      121 aatcttgata agggtgagat ttgggactta tggacactaa gataggatgt cacctgagac
      181 attcatctga ttctgaatgc agacagaagg aaagtgccta ggagaggcca ggagagagta
      241 agggatacta ggaatggaca gcccttgttc ccagctctaa tatcccgctg caattatttt
      301 gtggacatcc actccttgcc tgcacaggag atagggctat aagtgtatgt tattttttaa
      361 ttacaagggg gtagaaaaaa tcctgatgat gggctggaag gtgccattgc attgttattt
      421 ttttctctcc cttcgtttgc tgattatgtg agctgggctc ctttgctagc cgatgataag
      481 cagaatttcc atgttctctg cataattaat ccatctctgc ctctcttcat gccaactcgc
      541 ccgttatcgc cggcacatgc ctgaattgca aaagaatccg ctcttcaatt ggaacttatt
      601 gatattctaa gaaaaaaaag agggggaaaa aactgaaaat ccttaagttt aagccgcaga
      661 tttttaaatg gattaatttc gctgcaatcg cagccatcta aggcgggaag gcaggcagag
      721 caaattgaaa gcatctccat gtttgcagaa ttgggtccag aatgctgaaa tatactggca
      781 cagttctctt ttaaagtcag aaaattacca ttcatttaca tcacatgaaa tactttttta
      841 tgctagaaat attcaagaaa cgttccttaa atgcctgcta atgctagata acatttctaa
      901 ctttcaacat tttgctagac tttgatatga catgatagga atgcctgcca gtgtggaata
      961 ttata
//
LOCUS       KCPA01001713             871 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 188343tic ultra-conserved element locus
            uce-1660, sequence.
ACCESSION   KCPA01001713
VERSION     KCPA01001713.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 871)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 871)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..871
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="188343tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>871
                     /note="ultra-conserved element locus uce-1660"
BASE COUNT          274 a          156 c          136 g          305 t
ORIGIN      
        1 atttgagtta taaacccctg aaaaacagga tttataatgg aaatgctgac acaaccttaa
       61 ccatagcact gctatctggt gctgctataa tatactgtat gaagaaatca gttcattagt
      121 tagttataaa caaaggacag agatagtaaa ttacagtagg tattttctat atatttatga
      181 cacaaaaata tgcagctgca ttttatttct tgagacagta tttaaggatt tcagatttaa
      241 tacacttagt ttggttatgc acattgtgca ttttggtctt gctgttcctt ctcgtagttt
      301 tattcatggt attttcttct ttctctgttg ctcattagaa aaatgttaaa aatccatttt
      361 catctgatta ataataaagc tgatcacatg taacctaatt ttcattcact gctgcccctg
      421 tctgtggagt catatacaaa gtgacctttg aatcaccact gggcccataa agcacaataa
      481 gcaccattgt cctgtcaaaa attgaagatg ttttacatca ttacaaaatt taatgttcca
      541 tcttttcaaa tgcactactt ttcaaaggcc acattccaat tgaagctcat taaaatcaga
      601 ctcaagtttc ctgtggtggg gatgagaaag agtttctcat gcattcggag taatatgaat
      661 cactctttta aaacagatat ggttacatat tagttttgaa aggtacagta actgctgagc
      721 ctccactgtc tgcaacagtg aggcttttgt acttataaat ctaataactg cctcctgatc
      781 ccttgtactt catccacact gtatcctatt tacttatgaa taaatcaact ttctaaataa
      841 aattgttgtt caaaagttca ggggttgaat t
//
LOCUS       KCPA01001714             517 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 188448tic ultra-conserved element locus
            uce-5617, sequence.
ACCESSION   KCPA01001714
VERSION     KCPA01001714.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 517)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 517)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="188448tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>517
                     /note="ultra-conserved element locus uce-5617"
BASE COUNT          190 a           84 c          107 g          136 t
ORIGIN      
        1 agcctctggc accatgtttt tttttcatca aaaatgttcc tccattcaga agacttttta
       61 aaggagacag gaaacaggtt atttttgtat atcagattta acatctactc tatctatgga
      121 taacaggttc tgaggtgaac tgctgagtgt gtcgcagtaa gcctggcaga gttaagtgtg
      181 caaagtcggt ctgagcacat gctgtaatgg atttgacctc gaagagcact gcaaagagaa
      241 attgcagaca accatctgat ctgactttag aagccagtag ccctgactcc ctggatacca
      301 agagaaaaag gaaggactaa atagatggac tgaacaacca gaaatacaag gttgaataaa
      361 tgcttaatat ttgaagtgtt gacagtagaa aagcagtata tttccacact tgattataac
      421 aaagtaagga taaaattcct taagaaaaag taagatatat attcaataga agtgagaata
      481 taggaacaat aaagacacgc agctgagaaa atcttaa
//
LOCUS       KCPA01001715             589 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 188555tic ultra-conserved element locus
            uce-7886, sequence.
ACCESSION   KCPA01001715
VERSION     KCPA01001715.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 589)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 589)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="188555tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>589
                     /note="ultra-conserved element locus uce-7886"
BASE COUNT          196 a           97 c           89 g          207 t
ORIGIN      
        1 agtctttata atagtgtatt acatggctgg agtgaaattg agtcttcaaa ggacgtgtta
       61 ataggatgca ataatggtaa catattttga tgggtttgga accaagactt ggggaagtgg
      121 tttgctcccc ctgcaatcca ggttctactt tatcttgaca acgctgtgta aaacaaagac
      181 atagctttta aaactgtcta actaatatga tgaatgtcaa tcacttaaaa aactccactg
      241 tagcataaac acatactgta tacagctttt attctgaatt agaataattg aatcaatgac
      301 agtgatttgc caggatgtca aatctatcca tcatatcctg tcactaccag tttatttttt
      361 gtgatcaaaa tcaaaaagac tactattttg tcatcagcta tttcattagt agtaacaatc
      421 aggttttctc ttctatattt tttagatatg cctgttacat tttttatttc taaagacacg
      481 aatcctttta aaatcttttc aaaataaagt ttcagaactg aactgtcagt ttagtgaaga
      541 aaaaagacat ctactttcct atgccaacat atttaaaata ttatcattg
//
LOCUS       KCPA01001716             548 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 188662tic ultra-conserved element locus
            uce-2534, sequence.
ACCESSION   KCPA01001716
VERSION     KCPA01001716.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 548)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 548)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..548
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="188662tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>548
                     /note="ultra-conserved element locus uce-2534"
BASE COUNT          152 a          100 c          116 g          180 t
ORIGIN      
        1 tgtttctcag aacagttgct ccttgaaacg tgtttctgct ttatgtacat cgctgtctta
       61 ggaaaaatta gttcctggtt gtttgtcagt ggatttgttg tagtttcctc acagtcttta
      121 gtggaggaag taagtgacag tgatcagtga aggtggacag taagatttat aatgtatttg
      181 tgctagctga ttgccaacag aactggcctt tcccagcggt gctgtacgcg tacttggaaa
      241 atcaataggg attagcctat gacccccttc acatacttat actgtggtct gcattgctta
      301 ccaatatttc atctgtttca cttaaatgct ggtacttact caataatgtg tggctgctct
      361 tgcaagctac taattaattt ttaaaatgca gtatcacttg aaacggagat aaagcacacc
      421 tttagcatca gagggagagc agggcagcgg atttgtgaat ttgtacttgg tcctgctttg
      481 aaagttacat attcagatta aaaagtacta aatcaagtac agaaaccttt tcgccaacaa
      541 gctaaatt
//
LOCUS       KCPA01001717             397 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 188868tic ultra-conserved element locus
            uce-6418, sequence.
ACCESSION   KCPA01001717
VERSION     KCPA01001717.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 397)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 397)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="188868tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>397
                     /note="ultra-conserved element locus uce-6418"
BASE COUNT          130 a           69 c           69 g          129 t
ORIGIN      
        1 catacagatg tctgcagaag ggttattgct gccagctttt tccaatgtgc caaataatct
       61 ttgtataatt tataaatgat aacaaagcaa tcaggccaca ttcataaaag cccagtgaca
      121 cataatttag ctgaatctga ggattacaat taattgtctc tctttgttcc aagttctaaa
      181 tcttagtaaa tgattcactg catgtcatta cagcttaata tttgcatgaa atcacagttt
      241 aactggcata atttaacagc aattaaaaag ctatttaatt ctcatgcaaa ttggcatgag
      301 gggccttgag tatgaagtgt gtttgagggt gcaaaggaca gtctttaaga cacctctaac
      361 ataactgaca gttttccttt tcactgaaat gtgaatg
//
LOCUS       KCPA01001718             523 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 188977tic ultra-conserved element locus
            uce-1650, sequence.
ACCESSION   KCPA01001718
VERSION     KCPA01001718.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 523)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 523)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="188977tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>523
                     /note="ultra-conserved element locus uce-1650"
BASE COUNT          124 a          140 c          119 g          140 t
ORIGIN      
        1 aggggcgggc tagcggcgcc ttttctcccc agcggctcgg agaggtgggc cggggctttc
       61 agaggggctg acagatctga agttttggag gctgaatgaa agaaacactc agctaacaaa
      121 acagtgcgcc acagaagaag tttcatctgg tctggccaaa tccctccttt ctttccatct
      181 tttctctcct aataacagct gccctctcat tccctgttac tccgctgtga agaacaaaac
      241 ctccctctga ctatctgttt ttcttttctt ccccagagta ggtctcatta ctggtgatta
      301 gcagatgatt aaaaccaatt cagcttcccc cagtagatat tttctccctg tttgtgacta
      361 acgcgtcagt cttcaatgaa cgtgctccta agcttattaa cgggctcaga ggattagctg
      421 ccaccgagcg ccgccactcc gatattgtga tgcagcgagt gacatggaac catttgctga
      481 gcacaggcag ggccgctggg accaaatatc taaatcacaa ttt
//
LOCUS       KCPA01001719             666 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 189088tic ultra-conserved element locus
            uce-1063, sequence.
ACCESSION   KCPA01001719
VERSION     KCPA01001719.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 666)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 666)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="189088tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>666
                     /note="ultra-conserved element locus uce-1063"
BASE COUNT          180 a          134 c          156 g          196 t
ORIGIN      
        1 ggaaaggagc atctggaacc caccgtggct gttagtggtg ctgctcggtg gctctttggc
       61 gtgaggctcc tttggcgtgt cctgggcagg agctgagcgc tgctcgcagc ccatcgctgc
      121 gcctgaccta ctgttaactt gaagtagtgg aattaaaatt ttccattctt ttgcattgtc
      181 atgcctcacg ttgataagca caaagaaatg taaataaaaa agacctattt cgcaacctta
      241 gctgcaacct ttttgtttta tgacaaaaga cagttaatta gcatactagc agtaagcagc
      301 cttcccaaac tcgtgctaat tatgtattct gttgaccgtg actccagtca taaggtaatt
      361 ggcttgcagc aacatgacat ttcaaatcat ctcttgaaat tacatcaaaa agccagcctg
      421 ttttgttttg ataggggaac aatcaatttg ataagtggta acacagctca ttgtttcaca
      481 ttaattagac taattgcagc atgttagcct ctgaaataga cagaacttgg agaagacaaa
      541 ggctgtggcc tttagcatgc agtgcatgtg gtagttccac ttgcttgcac atactgtagg
      601 cagaaaacag agttgttagg attcagcctt gcgggagact gggtgttaac agtggtttga
      661 tgtgtt
//
LOCUS       KCPA01001720             790 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 189198tic ultra-conserved element locus
            uce-5438, sequence.
ACCESSION   KCPA01001720
VERSION     KCPA01001720.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 790)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 790)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..790
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="189198tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>790
                     /note="ultra-conserved element locus uce-5438"
BASE COUNT          229 a          166 c          151 g          244 t
ORIGIN      
        1 agacttcctt cataaaggat caacattgcc tctctctgca aaacagacac gagcatttca
       61 ttgaactggt gccactgctt gaaacatttt aaaggctgtc aggaagcaga ctgacaaggg
      121 atgttacctg tccatttgcc caggaaagcg atcagcatgg gtttggactt gcccagagaa
      181 tggacaagtg attgtcacct cctcaaatgc ttcaaacatt atagcatgga ttactcagtc
      241 tcagcagact tcaaaaagcc tttgtcatcc ctcagaagtg cttccctacg tgccaagcag
      301 tgccgttgtt tagtaatgaa caacttccat cagagcgcac aattcctcat cctgtctgat
      361 tctgctgatc gttcttgtaa ttaagtctct tttgattctc tttggcagca caccatctgc
      421 acaagaaggc acacctggaa agcagttttt tttttctatc cttgattaaa ctctgtttta
      481 aagcagagaa ccttaatcaa aagaagtgcc ttagtggagg tatctgtgcc tgtctcgctt
      541 ttgtcacaga ttccctctga agtctgcagg atttggattt gcataacaat ttccaggtgt
      601 ccacagtaga ggggtaacat ttgcagtcca atggtatgaa atgtacagga aaataacagg
      661 gtaccatagg catttaattg gtattaatta ctataaattc ctattgaatc tattataaaa
      721 aattttacta tttttagagt tattttatga ctcacaagaa tctcattcct gagtgagttc
      781 aagaaaatgt
//
LOCUS       KCPA01001721             733 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 189310tic ultra-conserved element locus
            uce-7889, sequence.
ACCESSION   KCPA01001721
VERSION     KCPA01001721.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 733)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 733)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..733
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="189310tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>733
                     /note="ultra-conserved element locus uce-7889"
BASE COUNT          195 a          175 c          133 g          230 t
ORIGIN      
        1 ttaggcgttt ctacccctca ccatagcttt gtgcaataat gatggcactt tgattagcaa
       61 gcctctgaac acagagcagg agcacagtag tcaagcacca tttgctattt tcctctcagc
      121 tgcgcagaca tgctgaaata atgatcctgg caacatgtta gcaaaacatt agaaagactt
      181 tagtaagcaa ataatttaat tacatccttt ttttattttg cacgacccct gaccttttat
      241 attgctgtac ctaaactcag catgggattc acacttccca ttcctgtcac agaatctctc
      301 catcttgtac catttaatat agtgtgctcc aggtgttctg tggtgaatga atagttatat
      361 tactacctgt cagacacaat cacactctat tcatcatccg cggctggctg cgtgaagccc
      421 tgcttccagc aggctccctc tctatttcct tgttcaaacg tctgcagtgc tttcggccca
      481 tctgtcaagc ctgtcattta gagggaaaac agtatcagcg ctttaaatat atggagttct
      541 ctattgaaac agtgctgtga ttgaactgtc agcattccca gtatcacaga cagtaattca
      601 tgactggtca gagctccatt taggttgcta ttaccacgct gaccttgctg ggtcatactg
      661 agagattttt ccctttgcag ttaggtctat aaatagtgca attaaccttt caagaactac
      721 aaaatgttct cag
//
LOCUS       KCPA01001722             315 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 189417tic ultra-conserved element locus
            uce-2752, sequence.
ACCESSION   KCPA01001722
VERSION     KCPA01001722.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 315)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 315)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="189417tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>315
                     /note="ultra-conserved element locus uce-2752"
BASE COUNT           82 a           70 c          101 g           62 t
ORIGIN      
        1 gtgttaagaa gcaagcaata ctgtcactga gctgatggtg ctcagtgact cctcaagctt
       61 ctagctggtc tttactgcgg gagcttgaca ccctgaccac tgaggcataa aaaacagaga
      121 attggaagcc tcagcctgac aggcactgga gaatccccca gagagggtcc acgatgtgtg
      181 tctgtgtgtg agtgtgggga ggagggcagt ggggatggtg ggggaggagg gcaggacaag
      241 agaggatgaa acaatgaaat gtcagcccat tcccacccac agccttgctg cagcagtgat
      301 aaacgtgctg ctgcc
//
LOCUS       KCPA01001723             719 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 189526tic ultra-conserved element locus
            uce-55, sequence.
ACCESSION   KCPA01001723
VERSION     KCPA01001723.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 719)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 719)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..719
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="189526tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>719
                     /note="ultra-conserved element locus uce-55"
BASE COUNT          238 a          146 c          126 g          209 t
ORIGIN      
        1 tagaacaact agttcccatt agcatgagtg acagtggtgc tcgtgtaaat cccatgtatg
       61 atgatagaat atggactctg aaatctgtga ccttgctgtg caatatttac atctacacct
      121 ttagcctctt gtgcatagag atgcaatctt ttatgcactt caccaggcat tcaaataaaa
      181 taggaaaggg gaagaatgct aagctactta gacagaaggt agtgaatcaa aaattgcaaa
      241 acttgagctt tcaaaaatag cctgagtgac ctcttccaat actctgacca ctccatcaca
      301 agcaggaggc aacccctgtg aagagcgaat tctggcaaag ttctctcttc acagatgatg
      361 cacagcttaa gctataatga gtttttgggt tacaaatgct gaacgcatta atattccttg
      421 atgataatta tcacagtata agcacctttc ccaatgtgag tagcataaag caactgaagc
      481 agcattttta ctacatttga aacaagctgg aaaatgggat tttctactct tgtaacctga
      541 ggtcaagata catcaagcta tgcatattaa gtatgtctac cctatataac tatatagacc
      601 tttccatata ttcacatgca tgcaattaac accttaacaa atatgccatg catgtgaaca
      661 tgatttccca agttataaag cagactcaat tttcaaacag gctacagtgg tatttcttc
//
LOCUS       KCPA01001724             586 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 189633tic ultra-conserved element locus
            uce-462, sequence.
ACCESSION   KCPA01001724
VERSION     KCPA01001724.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 586)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 586)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..586
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="189633tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>586
                     /note="ultra-conserved element locus uce-462"
BASE COUNT          159 a           93 c          132 g          202 t
ORIGIN      
        1 aagttgtagc atcactttaa tctgtttcat gtagcagttg gtatgtttag gaggtatagt
       61 tgggttaaat cagaaatctc tcttgactat gtgagggtca attttcttga ggtgtaacag
      121 tgttcctttc tcttttgcgg ctgtgttcat tagaaataaa ttcacattgg gttcatatcc
      181 gtatactctt cgtggtgaac aaatattttg tgtctactta atttatgact acaaagttgt
      241 gttaatatta gatttgggct tgctgtgcat aaagtgtgtc aaacttcagc tacagaccag
      301 ggggtgaagt tggtcaattt aattcgccaa gatctaaaga aggtcggtat catttcatat
      361 agccctggca gagcagatca ttaccagaca caaatctgtt cgttacatgc cgagggttta
      421 tagcaaaata aatagactgt catcataagt tcagaaaatt gtgtgttcga cccacgataa
      481 tgtgtaaagg gcgtttaata gagttcagca tttattcgtt atctatatgc ggacagagac
      541 ggcggtggcg ttatcagctt ttttcggtag ttttgtgtca catgac
//
LOCUS       KCPA01001725             705 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 189740tic ultra-conserved element locus
            uce-2210, sequence.
ACCESSION   KCPA01001725
VERSION     KCPA01001725.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 705)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 705)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="189740tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>705
                     /note="ultra-conserved element locus uce-2210"
BASE COUNT          219 a          132 c          133 g          221 t
ORIGIN      
        1 aagagacgct aaaaatccag ctgctggctc tctcactgag caaagttcat atcccagccc
       61 ctggtggttt tatttttcca attttagtgc aggaaataga aataggtttg agggccttaa
      121 atagaaaggg taggagaagc agttatcatc aagctttagc tttgtagtgt aaacttagca
      181 aagacttccc caatgaagta tacatatgga actacaaaac tttttatcca tttgttttcc
      241 tgaccataac cacgttttca cactgtcagc attttcatta gaagctcttt ttgtcagagg
      301 tttataacga gaatgtaaag atttgctatg ggctaaatct caatccaaga gcaaatgttt
      361 ataccaattc tgaaaacaat cagcttgccc atttgtagtt atgcatgtgt tcatcatctg
      421 ttactgcttg tccaatgctc tgcaacttct ggaaggaaaa agagacatct ggagggaaaa
      481 aaatgctatc ctgcagatag cacactgcat gttctcctga gttaatgaat aaggtactag
      541 agaaatgcag cttttcagtc aatacaaata ctgtcagatt tactgagaaa tattgtaatg
      601 tttggcttag cctggtctct cattacttac atggaatttg cttaaaaatt cactggaaat
      661 tattcatcta atgaactgag ccacttttgc caggcatggg aattc
//
LOCUS       KCPA01001726             680 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 189851tic ultra-conserved element locus
            uce-2366, sequence.
ACCESSION   KCPA01001726
VERSION     KCPA01001726.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 680)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 680)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..680
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="189851tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>680
                     /note="ultra-conserved element locus uce-2366"
BASE COUNT          212 a          125 c          121 g          222 t
ORIGIN      
        1 gccatctcaa tacatcccag gagcttaata gctttttgcc agtgcaacaa tcctgaagca
       61 agcaccgtat aaaacaacat aaaaggcctt taaaataact tacatatgat agcattcctc
      121 ataatactgt atgaaaaaac atgtcttatt tgtatgatgt ttacatatac aacaacatga
      181 ttaactgcaa acttgtctct catgtataag agtgtgcacc tcctaccatc atatcctttg
      241 ggggatatat ccctggattg caccttggga gctatggctc tcttgccata ggcatggttg
      301 tcataactgt tatattcaaa cgaagtctta gagtatttct ctagttcctt ggccaagttg
      361 gagcggggtg tggtggtggg gacattgttt ctgtagccat actgagggat ctccaattgc
      421 ttaacaaagc acatgggcct agaaattaaa gatatgtaca gtttgttaga tgcagttcag
      481 tttactatgt ttgtgcataa tttatagatc agattagaaa atcttagtta tttcttgtac
      541 tcaagagaca gcaatatatt attgcatttc cttagtttgg ttattttcag cagacaaaca
      601 atatcttgaa caaagcctag acaaaattaa ttctaatacc actaaatgta tcctgctgct
      661 aaaagtattt taaaattctg
//
LOCUS       KCPA01001727             741 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 189959tic ultra-conserved element locus
            uce-6248, sequence.
ACCESSION   KCPA01001727
VERSION     KCPA01001727.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 741)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 741)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..741
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="189959tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>741
                     /note="ultra-conserved element locus uce-6248"
BASE COUNT          222 a          149 c          124 g          246 t
ORIGIN      
        1 gtaaattcaa ttaatttatt tctgtatact gtatgaatag aagataaggg ctttcaggct
       61 tttggtccac tctgctaatt acagtgtttt gcgtatttgt taccaagaac cattttgaaa
      121 tcacataatt atctcagaaa attgcctaaa tcttcttcac tccattagca aatgtcatat
      181 ttacagattg ccagaggact taatggtcac catagacagc tgccaaaacg ctgcggccag
      241 cgaggccatt tgtaattctc attaacagtt ctaccatttt tggttgtatg aagagtgata
      301 acacactgat ctaacagtca ttaagaactt tttcttactc ctttaggatt aatttgcact
      361 gacccagaat tctctatttg cttaacacaa gcagtgggcc actttgatgt tatctgcttc
      421 tataaacaat agcgtacagt tctctcctgg gctaaaacag ctcttactct actgagaatt
      481 agctgtatta atcatcctga agtccaagag tgcatgatca taaattgtgt gcagggacct
      541 cacttagcaa ctcccaagac tctcatttat caacaccctt cctggatatt tagtatgtag
      601 ggagtaattt atttctgagc cggtgccttg tgatgtcttt catgttgaag taaagttgga
      661 aaactttctg caacaaatat aatttttctt acttcctcag tgtaaaaaca aaaattacgg
      721 accacagcta aagaatgatt c
//
LOCUS       KCPA01001728             531 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 190072tic ultra-conserved element locus
            uce-5606, sequence.
ACCESSION   KCPA01001728
VERSION     KCPA01001728.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 531)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 531)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="190072tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>531
                     /note="ultra-conserved element locus uce-5606"
BASE COUNT          132 a           92 c          140 g          167 t
ORIGIN      
        1 attccaactg ttttactcga attggctgaa gaaaatccct agtgagtatt tgctcctcga
       61 caccgacatt aaattgtatt ttaattgctg tcagtcagga ttgttctggt ttagaatacc
      121 aacactgtgg tattgctgtg taaatgtctc agtgttccgc tgtggtcgag acgagctggg
      181 gatgttggga tgtaacttgt ctcttctggg ggttttatct tgccttttcg tgtgtctttc
      241 tgtagacata tctgaagaga tggattaaga atgctttgga ttaaaggatt gtggagcaca
      301 tgtcaatcat tttaggattg tcaaaaggag gattgaggag gatcagatca ataatggagg
      361 caatggtatg actccaagtg ctattgtcac agatgaactt ggcagtattg accttatact
      421 gagagacagg ggaattgagg ccgagcacta cgtgtcccca tgttctcgtg accgcaggct
      481 gcgattgctc ttctctttta aaaggggggc aattgtggcc aaataaccgg g
//
LOCUS       KCPA01001729             760 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 190184tic ultra-conserved element locus
            uce-3862, sequence.
ACCESSION   KCPA01001729
VERSION     KCPA01001729.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 760)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 760)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..760
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="190184tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>760
                     /note="ultra-conserved element locus uce-3862"
BASE COUNT          267 a          151 c          128 g          214 t
ORIGIN      
        1 ccataaaaca aatcaagcct cgtataaact tgtgtactga caaacacatt aaaacaacag
       61 aaaccctctt taaaggagct tcagtgcaac tcgacttcta acttaaaaat agcaattctg
      121 gctcttttta cagacagaat gaaataccta aagtgtccct aaattaacaa gtaccacttg
      181 ccatagacag catcgccctt agcagctcct aaaaacttca gaaaaggatc ttaaaacagg
      241 aagcttagtg agctcataaa actgttgttg gagccaggaa cacatagcat atttaatctg
      301 caaactgtga gagtctacaa tgatttcagc aagatctgag gcatgccctc aaggtttgct
      361 gggatctggg attagggagt tgataagaac cctctactgc ccatggacat gtttttcttc
      421 tgcagttaaa cacaaatgca tagagacgtt tgactgctgc ttggcgttac tgctcaagtt
      481 atataaaagc tttgcagctc cttttgctgt caatatatca aagtttaaaa aaaatcatca
      541 aagtgtgaaa tttcatttaa agtctgccag tctacagctc tatttcacag acctatcaaa
      601 taaaagtaaa gatgaaaaat gcactgaaag aacttgaaaa gtttgcagca gcacccatgc
      661 cctatttttg tttattctgt ctcatttttt aaagtataac aaatcaattc ccttataaaa
      721 atgacaaggg aggatgtcta taaaacctgt agttaaaaga
//
LOCUS       KCPA01001730             624 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 190292tic ultra-conserved element locus
            uce-3655, sequence.
ACCESSION   KCPA01001730
VERSION     KCPA01001730.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 624)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 624)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="190292tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>624
                     /note="ultra-conserved element locus uce-3655"
BASE COUNT          175 a          126 c          151 g          172 t
ORIGIN      
        1 tcacctccat caaccttaac ttccttagtc acaatgcaaa cagctctaca tagttttatt
       61 tcatcattta ctgagacgta tatcctaaac acttctggac agcagctgtg ggtggaaaat
      121 atatagaatg gcgaagcttg tgaagtgtgc aagaaaaata gtgctagtta aacgtgcctg
      181 aagattggga atcccagggc attcatgtgc ttcagctcag aaaagggagg gatgctgcat
      241 ttcacaacag aataaaaata attgctttgg ggacccaagt taaaatgcag gtgttttgag
      301 gggaacataa acattttttc ctaaatgagg cgttgagggc taggagaagg gcagtaaaat
      361 tagtggaatt actgcctgat tttaaccaga tgattgctgc agttggacac cagggcggtt
      421 tcattaggga ctctaattta caagccattc tctgcattcc agggcaatgc agcagctccc
      481 ccccacgctc ccaaagaatg ccagcgctga ccttaatggc agcagatttg gagctttttt
      541 tctcgttctt ttgtggcttg tttttagagg ccagcttggc tgtagcactg tggccaagct
      601 tttcgggaag ggaaagagag tcac
//
LOCUS       KCPA01001731             524 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 190401tic ultra-conserved element locus
            uce-7988, sequence.
ACCESSION   KCPA01001731
VERSION     KCPA01001731.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 524)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 524)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="190401tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>524
                     /note="ultra-conserved element locus uce-7988"
BASE COUNT          171 a           92 c           91 g          170 t
ORIGIN      
        1 aaaagaaatt tccaaattcc tgaactttca aatctgagac caaataaaaa gcctgcagca
       61 ttattagaat tctcttgtgg gcagcaccac gttctgttca tcaatctgct gtacccattt
      121 tcgtagccct cactgggaaa ttaaataatc ctgactgaca actgacacat taattgcctt
      181 tgagggagca cacctttaaa aagcagtaat ttaaagtctt ctgctttggt ggaagaacca
      241 atttgcagca tcatcagtca gggttttgac atgtaacttt gcacttgcca ttttgttaat
      301 aaagaatcac acttgaatcc tgagagagtg tttccctaaa gagaaactta gatgtctttg
      361 tgaaattaag atgactttga tagggacatg taatgaatgt ttaaatgagt tattaacctt
      421 tcatgacttc agtgagtgtt actgcaagac aattcatcat tatattgtca taaactgaaa
      481 aaggtgaata tcacagtaag atcaatttct ttaagtttat ttgt
//
LOCUS       KCPA01001732             725 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 190511tic ultra-conserved element locus
            uce-3991, sequence.
ACCESSION   KCPA01001732
VERSION     KCPA01001732.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 725)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 725)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..725
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="190511tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>725
                     /note="ultra-conserved element locus uce-3991"
BASE COUNT          238 a          147 c          142 g          198 t
ORIGIN      
        1 acttttgtgc gggggcaggt ggggaaaaac acattcaaac agtacacagg ttgttactcc
       61 atatgtgttt gcaggactat aataaatgtt tttaatctat gaaacatctg ggaaaaatcc
      121 aatttatact aagatggaat acgcatagca tagtttctac aatataaatc tgcacaaaac
      181 taacagcatg ggtctaccct ttaggctttt tctaggagta taaaatatgc agaatcctac
      241 caggccatat tgccatgggc tgtgttgtca aggtgacaga gtagctccag ggtttgagtg
      301 ttgcttgatg aatcatcagg ggattcatga ctgcctgatt ccaattcctt cggcatcctc
      361 caaacagcag cacatgtcat gactttagtg tctgaagcta agcaacagag aataatgtca
      421 acagatcact gtatgggaga cgtattttgt acacgctgca ccaacattta cacaaatcta
      481 taagcaactc acatctgctg tttgaaatac ttaaaaatat tacacaagat gaattcaaag
      541 aatgcagaat gtggctacag acacaaacct caagttagca gttgctgcga aactcaaatt
      601 agcacatatt taacgtgact ccctgaacaa aagcaaaatt aggtgctcgg gacacatgtt
      661 tgccaagttt cattccccag actgatgtta atgaaaacga cccacaagtt acattgcttg
      721 agtcc
//
LOCUS       KCPA01001733             461 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 190613tic ultra-conserved element locus
            uce-4389, sequence.
ACCESSION   KCPA01001733
VERSION     KCPA01001733.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 461)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 461)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="190613tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>461
                     /note="ultra-conserved element locus uce-4389"
BASE COUNT          136 a          106 c           91 g          128 t
ORIGIN      
        1 ctgtttttat tactgctgtg cttttcaacc acaaaaagtc agccaggcaa tcccgtgaca
       61 aactccacta aggacttcac agttaacaaa acaatgaatg aaacatcatt ctggcacaca
      121 gaacggcttt ctgctgtctt ctgccgcctt tgcctttttt ttccccaagt ggaaaagcaa
      181 cttcaaaaac aaggtgctgt cattttagca aaggagaatt aggactgtga aaggatgaag
      241 tgtccttgca cagaaagact gcagctaaaa ttgtatcaat attcctgtta taaactgata
      301 aacacagagc tccgtgaggt caagttgtac atgcttgagc tgacatgcca atctgccagc
      361 agtcatatgg ttctcatatg gcgacacgcc acagatgcca ggaaaatgtg agaagtttct
      421 ggctcatttc atttcactct cctgaatgcc atgtttgcct g
//
LOCUS       KCPA01001734             549 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 190720tic ultra-conserved element locus
            uce-6118, sequence.
ACCESSION   KCPA01001734
VERSION     KCPA01001734.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 549)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 549)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="190720tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>549
                     /note="ultra-conserved element locus uce-6118"
BASE COUNT          156 a           99 c           88 g          206 t
ORIGIN      
        1 tgtagatgta gtcctgttgc cagaaattac actttatgtt ggagatgggt ctgaagcata
       61 gaaatgtctt gctcacatca gtggcttctg attcctgctt aatttttgat cttattattc
      121 aggattattt ggttactgat ttctgtaggt ttatttacca gttcttcttt gtgtgccctt
      181 cattgtcctt gattatttct acattgtatt gtctaacgaa agaaaaaaag tttcagtatg
      241 tatttttccc atctggttag tccagcactc ttcttaatta gtaaaatgcc atcctgtcag
      301 attctctcct gccaggaagt cattcagctc tgaaatcact tcttcacctc catcatatat
      361 tttaacattt ggcaaaagtc ttattcttcc ttaaaatcaa ctatagcaat gctaattaag
      421 tgtagtttag gattaatttg tatttaaaca aggcctcatg ggatttcaga acatgtactg
      481 agaatgtcat aaaatatgta acaacacttc tcaattaata ttcattcact tgggaacaat
      541 gaaaagcag
//
LOCUS       KCPA01001735             766 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 190831tic ultra-conserved element locus
            uce-3159, sequence.
ACCESSION   KCPA01001735
VERSION     KCPA01001735.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 766)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 766)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..766
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="190831tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>766
                     /note="ultra-conserved element locus uce-3159"
BASE COUNT          240 a          145 c          141 g          240 t
ORIGIN      
        1 tagtcctgac cactgttttt caagggtgac cactggtaca gaaaccagta caaccttaag
       61 cttccagggc gaactacacg cttcctgaag cctgccttag aacaccacca tgaaagggat
      121 gatgatgaaa tatcagctat catgtaacta tctataaatg ttagatttct acaaagtgat
      181 tccactgaat tgtaattaag ggtttgaaag tcgaatgatt ttaagtgcta gttttaatta
      241 ccgcttggtg aactttagtg tgttagaatt gtcacaactt tcctttagaa ttagtgtcaa
      301 gccaggcaat acagtgggaa attattaact catactttgg ttcagcaatt atctgcatta
      361 caaggtttat gcaattagct gtttaagatg tcattatatt ttgccatctg gtacacagga
      421 gtttatgcat atgaacaggc acatgttgaa gtgattttca ctatatgaca cttgatctca
      481 acccaaatca tcactataat gagtggaaga cacagtgtac agtacattag tggcaggtgc
      541 atactatcaa cctcatttta atagaagact ttcatgtttc catttttaaa gtattctgca
      601 caagtgctga agaattaatt gctcgtttgc aatctagcaa aaaccgagga cacgttactg
      661 ctaaatgcta atcagctttc aggaaagcgg ccacttattt ctttccatct gtaactccag
      721 gccaatttct gctgcagaca ataagaaagt taagttcagc ttaaaa
//
LOCUS       KCPA01001736             646 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 190942tic ultra-conserved element locus
            uce-2563, sequence.
ACCESSION   KCPA01001736
VERSION     KCPA01001736.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 646)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 646)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..646
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="190942tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>646
                     /note="ultra-conserved element locus uce-2563"
BASE COUNT          206 a          109 c          131 g          200 t
ORIGIN      
        1 tccttaatag gtttaaatct cagtcaggga gaaaaatatg tgtttttaac taataccatg
       61 tcatctcttt aatcatgctg attctgaata attcacccac tgtggaagtt gcagggtgag
      121 aatctatagc tctatctctc actgggggta gtttattatt actgagtctg acagcaaaaa
      181 gccctggcag gttaattgct gcagcaagac tagctgggag tttgctgttg atatatagtg
      241 actaaagggg gtgaaggaaa ttgactgtgc ctgttacagc acaaatatct tcatgcgcct
      301 caggttcctc acaaagatat gagaaataaa tgttcgctct tcattttctg tctgcacaat
      361 acaaatagcc ttgggctgaa catggcaacc acagcataca gaatacatat gaggaaattt
      421 gcaaattaac attattacaa acattcctgc ctgaaagtgc tgaaaatcaa tttcaatata
      481 gtttgcattt taatgaggta ccaaagagat aaatcagttg tgtttgagga gcacttggct
      541 ggcaatgatg ttttctgatc atatcgtgtc ttaactaata ttagattaag taaaaccact
      601 gttaattgaa ggcatgggaa atgttactcc tagttaatga agtaaa
//
LOCUS       KCPA01001737             663 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 191055tic ultra-conserved element locus
            uce-4160, sequence.
ACCESSION   KCPA01001737
VERSION     KCPA01001737.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 663)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 663)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..663
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="191055tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>663
                     /note="ultra-conserved element locus uce-4160"
BASE COUNT          217 a          142 c          113 g          191 t
ORIGIN      
        1 tctcaaataa ataagagcca tggaaggaaa aaactgcagc tacaaagtag ttctaaccca
       61 ttaaatgcag atggcccaca gggggtttaa tcataagaga gagagcacac atcatgctga
      121 aatatagagc tgttttctat cacttgttac tacttgaatg tctgtcccag gaaagtgaat
      181 tcaatatatc ttcctggcca tcagttgccc tctgaatact ccttctctct ctgatgtagc
      241 tagatttccc tttagaacat acagagatga atgagctctt accacacgta gaagtgaaag
      301 aaaacatttc tttctgcacc agaacagatg agattcatca ttaagagaat ggatttgacc
      361 ttgtcaagtg gaccaaagca atttataaac aaactcctac aggggaggct acttttggcc
      421 aagtactata ttagcagtgt tttacttatg cccactgcta ccttacaata acttcataaa
      481 caggctgact tcctgaaata tagagtgctg agagatatca cagatgtacc taaaaacact
      541 gggatagcat attccctccc tagaggctgc ataaaaatat gtccacccac cttgctttct
      601 catttttggt aaaagttgct gctcactatc caaatttaat cttcatttca aatatctatc
      661 aaa
//
LOCUS       KCPA01001738             532 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 191162tic ultra-conserved element locus
            uce-5977, sequence.
ACCESSION   KCPA01001738
VERSION     KCPA01001738.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 532)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 532)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="191162tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>532
                     /note="ultra-conserved element locus uce-5977"
BASE COUNT          184 a          100 c           79 g          169 t
ORIGIN      
        1 aaacacaact ggaaatggat gtttgaaaac tgatatcaca cctgatttta attaaactaa
       61 aaccaggatc ctataacata taatttcctg tttttggaac tacttctaat caggccaggc
      121 tgctttgcaa catacacaat gtagaaggga gtgctatcat aacacttcaa tagttaagtg
      181 actttatgag aaaaatactt ccaaatgttt cctaaaacct tccaaaccgc accaaagaac
      241 attatcgtaa tattatgttt ccccatggcc tccaatattt aggcttgcta ttctcaaaat
      301 gatacttgga tgaaaaatgc aagtttatgt aatgtataaa ttactactag aagtaaagtt
      361 gcctttaaaa ttactctgtt cagatgtcag atattttaca ttttcaatag cctttctgta
      421 ttaattggag aaatggccgg gaataatctg tatttcagaa ctgagcagtc accttgtgat
      481 cttattccta gcaaacactg aaaacaataa ctgtcctaac cgattacgta tc
//
LOCUS       KCPA01001739             501 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 191267tic ultra-conserved element locus
            uce-2923, sequence.
ACCESSION   KCPA01001739
VERSION     KCPA01001739.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 501)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 501)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="191267tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>501
                     /note="ultra-conserved element locus uce-2923"
BASE COUNT          123 a          107 c          144 g          127 t
ORIGIN      
        1 agatgactgg aatgagttgg aaagaaagat gccatctgaa actgggcgag gctggcggga
       61 gggctgctgt ggcttaaggg tggcaggagg aaagtcacca taagattttc ttgtgctgga
      121 gtacttatcc tgacctgcta gattggaatc ctcctcctca tcatcatcat cattgtatgc
      181 aacaaacttg gcagtataaa tcgtgtcagg ggagaggacc tgtgttttga ggtaagaggt
      241 gtttcgctga ggtgggggag gaggagcgtt agatgaaggg gttggggatg ggagttcata
      301 ttcccgtgga agtggaggtc tgtacagacc aggctcgtca ggttccagca atcttcgttc
      361 agcttcatcg tgctgcctgc gcctttcagc ctctaagcga ctgtaatact cctcttcctg
      421 gcgcctctga aagcccagag gaaacagaaa cagcagtcac atttcaatcc atgctttaca
      481 tcaccgagct acaaacatct t
//
LOCUS       KCPA01001740             615 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 191376tic ultra-conserved element locus
            uce-4562, sequence.
ACCESSION   KCPA01001740
VERSION     KCPA01001740.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 615)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 615)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="191376tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>615
                     /note="ultra-conserved element locus uce-4562"
BASE COUNT          150 a          154 c          153 g          158 t
ORIGIN      
        1 ggttaaagat gggcggtttc cctccccagt aaaggtaatt aatctcttga gcagggaaag
       61 aatttgccat tgagcagata gggctggttc aggagcgccc ttcagccccc aacaatatcg
      121 cattaccccg gcgcataaag aacgggagcc gtttccgctg gcggggccat aatggaggta
      181 tctctttaca aagcccccac ttcaggccag ctgaatgcct ctgccgagcc tccgaaatcc
      241 cgcagccctt tagcaacaaa gatctgtttc tttgcttagc atgaagtaga cctcagaggc
      301 cggtgtgtgc cttggcctgt aggccaaaag cctcctgttt acaatttccc tattcctgtt
      361 tttaatgttg ttctgagagc agccacaaag ggccggtttt gtccagcagg aacaagggag
      421 ctattagaga gggacggagg aaggaaggaa gggagatcca aaaggagcag cccaggaggg
      481 attagcatac acagctgttc cctcagggac aggagcttta tgctttttat aatttccctc
      541 tcatttacat tttttaatat ctggtttcct tgtttccagc ccacgtctcc aggaccatct
      601 gcccatttta ttgga
//
LOCUS       KCPA01001741             856 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 191488tic ultra-conserved element locus
            uce-2598, sequence.
ACCESSION   KCPA01001741
VERSION     KCPA01001741.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 856)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 856)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..856
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="191488tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>856
                     /note="ultra-conserved element locus uce-2598"
BASE COUNT          283 a          164 c          162 g          247 t
ORIGIN      
        1 aatatttgga ttggcaaaag tatcacagaa cgttgtgtag atgatcatca ggagcacgca
       61 gctgctgata gcaccaaatg gaggcttctt cctttcaagc cagtccttga tgtatcttcg
      121 gacaatctga aacacagaaa ccaacaggtt gcctcttttc aaagatgcag ggagccaagt
      181 tgggcatcac aaagtgaatc tgacagcgga aagacacaaa gagaagagag taatttggat
      241 gatggccaca gtggatttca aagcttccct gccacacaac tcttcttctg gggaatttaa
      301 catttgtagt gcaacttcca ctgggcgtcc ataatgagag tatattttca agtacattca
      361 aatccatcct taatcatgcc aaatgttctt tgctagctgt cactgagaca tgcccattaa
      421 gcctccccaa agtttatctc ctctgctgat actaatggat gtatgtaatt atcacagtcc
      481 cctttgcatc aacagacaat tccaagtgca actttgggaa tcttaaaaat ctgacatctt
      541 caggaatttc atgatggtag ataatcgaaa gtgatccatg gaacatttta atatttaaat
      601 agctagcgat gcaccagaag tttttaatta aattataact caagcttgaa aagcaaaagt
      661 gcatgtgttg tgggagttta aataattcaa actctgaata tctggagttt ttgtaaatcc
      721 aaagacaaat gccatttgca cgcttttaga ataccagaat taacacatga aaacaaggaa
      781 acctactgta cttagcagaa cttttgcact tttaggaaat agaacatgat gcagtttttg
      841 aagaattttt tagaaa
//
LOCUS       KCPA01001742             339 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 191595tic ultra-conserved element locus
            uce-6256, sequence.
ACCESSION   KCPA01001742
VERSION     KCPA01001742.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 339)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 339)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="191595tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>339
                     /note="ultra-conserved element locus uce-6256"
BASE COUNT           89 a           92 c           75 g           83 t
ORIGIN      
        1 aaagcagagg gacccctccc caaacgtggc cagaggagat gcaggcaccc cacaccccgc
       61 gctcgcaccc gtcgcttgtt ttttacattt agctcctaat tatgttgcat ctattgccat
      121 acacttaatt agctgcatta atgtgatttc ttttcacata gtcaagcaat taagagctat
      181 gattgagttt cattcaatta gcctcaacaa acatgctaat tgatgtccca gatgcaaatg
      241 aggtgcagtg agagaaacct gctgggggac cgggggctcg cagctccctc ggcttaacat
      301 ggctcctccc agggcacaac catcagtggt cccaaagag
//
LOCUS       KCPA01001743             730 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 191706tic ultra-conserved element locus
            uce-3166, sequence.
ACCESSION   KCPA01001743
VERSION     KCPA01001743.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 730)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 730)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..730
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="191706tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>730
                     /note="ultra-conserved element locus uce-3166"
BASE COUNT          187 a          164 c          158 g          221 t
ORIGIN      
        1 tcatgcaaac taggaagaga tctgtcaaat atcaaataca aattttgttg ctgaagctct
       61 tggaaaattg acaggtagca tgcaagcaaa cattaaatca ataacagcga atttcccccg
      121 ggaaacttgt agtgttttct catcaaaatc tttaaatcct taaagaaccc ataaaaggtt
      181 tacacactcc atgttggtta atctggttac ctctgcatgg ctcggcagca gggccagcta
      241 atacccagtg ctgatcaccc agcagtgtgt gtaatatcca gggccccggc gctgatgtat
      301 tgtagctttg ttagtcaccg tggctccttg gtaaattcat ttggagtcct ccggggtttt
      361 aaatctctca tttggccaac aacgaggtct gaaaagattg cagttcattt cgacccacag
      421 tggatggaag gctcatttac tggctgcagg caactcaatc aggccggccg ctgatgagtg
      481 agtgacttgt tcagaccgct agtcaatatg tgtctgctgt gatagaatgt cagcatctgc
      541 tgcctgctcc tgtctcccac tgctctggct tttttcattt gggctgatca atgttattaa
      601 aaacacctag gagttcctta actgctctgc cacttgaggc ttttccttct taaacacaac
      661 tttgtattat ctgcaaacat gtgcagatga tgttttttac atgagtgtgt gtgtgtctcg
      721 ggcacataac
//
LOCUS       KCPA01001744             630 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 191812tic ultra-conserved element locus
            uce-2353, sequence.
ACCESSION   KCPA01001744
VERSION     KCPA01001744.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 630)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 630)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..630
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="191812tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>630
                     /note="ultra-conserved element locus uce-2353"
BASE COUNT          179 a          161 c          110 g          180 t
ORIGIN      
        1 ttttgcacat caagcaccaa accgttgctt gctttaccca tcaggtgcaa tcttaagcaa
       61 aactttatca aagtaacatg ccacgttcct gcatgctgat tttacaaaac tcactctctg
      121 aatgttgttc tacatgatgt catcacactg taactcactt catttacagt atctgtttca
      181 cttctactca caagctaata taactctaac tgcacacagg ctgctagaca catgtgcaca
      241 gcaaatggaa tctgaactta gcttaacagc ctcatttatt cctgatggtt taaattattt
      301 catcacaatt aatgacaccc cctcagcttc ctgtgcagtg ctgccagatg ttcagagacc
      361 acaaagccac tctcttcttt gacggctagt gacaagtcgt cctctgaagg acgttccctc
      421 agtgcacagg ccggatgaca cctccattgc ttagcacctc tctacctccc caagtaacca
      481 tggtgaaaga aaaaggaaga catgagaaac cagtcagcgc attagtaagg acaaattaag
      541 tgaagcgttc tgaacctgaa gaatcttgtc tcctgctact ggagtttcaa gcctgattgt
      601 ttcatttgcc ttgatcttca aggtgtgaag
//
LOCUS       KCPA01001745             373 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 191921tic ultra-conserved element locus
            uce-3636, sequence.
ACCESSION   KCPA01001745
VERSION     KCPA01001745.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 373)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 373)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="191921tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>373
                     /note="ultra-conserved element locus uce-3636"
BASE COUNT           80 a           90 c           74 g          129 t
ORIGIN      
        1 ttttctttca attcctgggg gtgctagact atttacccat taactgtcag ctgtttctgc
       61 tgctcggttt attggtgaag gaagttgatc cctgcatgcc atgacagaga ccattgcttt
      121 gcccatgcct gctccttaca tgtaccgatt gcttatctgt tctgcaacct ctcctctttg
      181 ttactgcttt cctttcactg gatgggattg attccctgtg ggctcatatt agaccacggg
      241 aaatgtctgg gtaacacatg aagagatgga aaatcttaca gccacacaac aaacggttag
      301 tttacagtgt tgccacttct cttccttaga gtgcttttcc cacttcttga acatttgaat
      361 caagtacctt ttg
//
LOCUS       KCPA01001746             752 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 192031tic ultra-conserved element locus
            uce-4615, sequence.
ACCESSION   KCPA01001746
VERSION     KCPA01001746.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 752)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 752)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..752
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="192031tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>752
                     /note="ultra-conserved element locus uce-4615"
BASE COUNT          168 a          154 c          192 g          238 t
ORIGIN      
        1 ctcttctgct gaagaaagat gggggagttg ggcattgctg ttaatcttgt tatgctgatc
       61 ttgcgagact ggtgattgca ctgataaagg agcggccttg atttctgcac atatgttaca
      121 gttacttgta aaactgggct cacagattgc tctgaagctt ttactgttcc tgcagaacat
      181 tttggtagtt ccagcagtgt gatcacaaat gcagcatctc tctcctaatg ctgtgcaggt
      241 tgataaaaca gttgccgagc tggagtccct aaagaaatta ttaattatct ggttaatgtg
      301 catcaggctg tgggagtgtg agattaatca ccggtgctgg gatgagttgc tgaagtggat
      361 tttggttttt cgtctcctgt cactcggtaa tggcttttcc ttccttcacc atcaggtgaa
      421 caggtgcgga gatgctgtat tttcattttc ctgtagtcgg gaacagccgg tgaccaggaa
      481 atgcctcttt ctcagtcctg ctgcatgagc agtttacaac atggagcgct acctgcttcg
      541 gtgttccagc tgcaggagtt gctcctacag tgcagcactg acctgggcct tcccagataa
      601 acacatgtgc ctggggagag tgttgggtct ggctctcctc tgttccccag gtctcaaagg
      661 ggttgttata tttggaagtg gaattgcaac ttgactccta ttttgagtgt atttatatta
      721 cctggaattt ttcagtaaat gaacaatcag ca
//
LOCUS       KCPA01001747             749 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 192142tic ultra-conserved element locus
            uce-6838, sequence.
ACCESSION   KCPA01001747
VERSION     KCPA01001747.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 749)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 749)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..749
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="192142tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>749
                     /note="ultra-conserved element locus uce-6838"
BASE COUNT          212 a          138 c          158 g          241 t
ORIGIN      
        1 ggactatttc tggcattgct acttcataat attatttgta gggagggaag tcagcagatg
       61 cataggctcc tttatagcat tgacaagtca aggagatgat taacgagagt accagacaat
      121 gtaatggtag gagaaggccc acagaagtta aacaaaagtg ccttcagaat ttagagaatt
      181 cccatgatcc atagtaggac ctcattgtgc ttgtctactg tttctatttt tgattagatt
      241 tataaacaca gcaccacata ttttcatgtg gctcatagcc ccagggcaga gtgagattga
      301 ctgtgctgaa actgtgaggc ttgtgaattt cgggcaaggg atggagtgaa ataagtagtg
      361 taattgtttt tgtggagtga ccgtgggacc tcttctgttc tgaattacac atggttcaac
      421 cctttgaccc aaccaacctc ggcaatgcct ggtagatctc ctaaagctgt gctgaaaggt
      481 cctatcagtg acatgttgga acattatctg tcatgtgaga tgtgtgccaa caaccatatt
      541 aaactacatt aattactagt gaggccatgt ttgtgacaat ctcaacttca tttaacccat
      601 catcatgtta gttattgttt aaacaggaag tacaaatggg gacaatttat gaaatcaaaa
      661 tgcagcaccg atgttttgtt taataaattg tatgttttac tttgttttat ttcccttcta
      721 cttcccctgg cacttttgtt cttgtcatc
//
LOCUS       KCPA01001748             507 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 192252tic ultra-conserved element locus
            uce-7379, sequence.
ACCESSION   KCPA01001748
VERSION     KCPA01001748.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 507)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 507)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="192252tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>507
                     /note="ultra-conserved element locus uce-7379"
BASE COUNT          146 a          110 c          140 g          111 t
ORIGIN      
        1 aagaccctgg cagcgttcaa taagtctccg agcctgctaa gtgagatgtt gacagaaaca
       61 aaagaaaccc cgttaggctg gaagagggcg agggagagga aggtttgcat acatttcaag
      121 gctcagccaa aatacaaagt gctttttgtg aacgcgagag aaaaggacgt gaagcaggca
      181 aggaggagga agagaagggg aaggatgcct caatacaaaa aagcttagcc tgataaaata
      241 tttaggacgg gctcacacat cagaatatta atgctctgca ttccttgtgc ttgcactctg
      301 ttgatcttca ttctccagtg accttgttta cagtatctga atttgcagtc tgcattttaa
      361 taaggccctg agagaaggtc tgagacacag cgcctcgctg aaccaacttc aaaacccctc
      421 cgactggttg gaattctgga ggatgggatg tagctccggg ttgcctggtg cccaccccgg
      481 ggcagcaccg ggaaactggg gcagtgc
//
LOCUS       KCPA01001749             756 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 192362tic ultra-conserved element locus
            uce-2185, sequence.
ACCESSION   KCPA01001749
VERSION     KCPA01001749.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 756)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 756)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..756
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="192362tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>756
                     /note="ultra-conserved element locus uce-2185"
BASE COUNT          248 a          132 c          122 g          254 t
ORIGIN      
        1 ataggttcct attgaagtgc atttttctcc tgcaaactgg aatcaattat aaatggcaaa
       61 attttgttca tctttccaac tttgttcaaa gtgtatgtgc acgttttaaa gtggaatcac
      121 ttattgcttt tatatttgtg gcaaatatga aagaagaatc tttcattccc tgctttcata
      181 ccatggtgtt aaaaacatac aaatgaactt ttaaggctga cattcgtggt tgcatgtaaa
      241 taaagcacaa gccacaaaca aagccagcaa tctcacatac ttgccttcag tggtaaagga
      301 tggaaaggct gcctgctacc aatcagcaag tggttgctat ggttacaagg tcaggaaata
      361 tgccttttcc ccagttgtcc aaggcttgca catgtcactt ctgaaactat gaattttata
      421 tacaggtcag gagatgcata ccaaagaaat aaacagtgaa ctggaccata atgacagcta
      481 acgttcaaac gtccttgaat tttttaaatt tctatccaaa cacattttgt cattttgaat
      541 gggttggttt ttttgtataa aattggagca attctttcct gtaatgaaat tttgcaaagt
      601 aggtacaaac tattattata agctgcatca ataactttcc tcagaaagat acttatgttc
      661 tttcccttta taaactcttt aaattacagc tttggaatat tataagaata taatttgatg
      721 caacttaaga tctcagaata ataactactt tctaaa
//
LOCUS       KCPA01001750             739 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 192472tic ultra-conserved element locus
            uce-1207, sequence.
ACCESSION   KCPA01001750
VERSION     KCPA01001750.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 739)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 739)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..739
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="192472tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>739
                     /note="ultra-conserved element locus uce-1207"
BASE COUNT          217 a          179 c          132 g          211 t
ORIGIN      
        1 aagacatcct tacactgaag ctctgaaaat actagagctt agaccaccac tgtcagtttc
       61 tccctagata aaaggaaatg tcttctcttc cagggcttct tccctccttc ctggactcac
      121 tgggactaca ggctctgaca ctcctttact gcccctctac aatttcacct ccaactgctt
      181 gcaccgcccg tcgtggtgaa gtcactgatc tagacagagc caccttaaca ggaattttgg
      241 atgggtctta gtgaagggga ggaaaaaaga ggacataatg tttaattata agaaatgatt
      301 gaaataggca cagacatacc ccgggtgcct ctgcactgca gcaagctcta aacttgttat
      361 cgttaatggt ttaaatttca ctgtgctaat catttcagga cacaagcctt tcttgataat
      421 ctaatgaatt attccaacat ccttcagcaa aaaaaatcct ccatgacagc actaattaca
      481 agacgttttc ccagtgctta tgtaaaatat gacagagcag cagcttaggg aattgcagaa
      541 aactgcttct aatttccact gagaaactga caaacacctc tctttcatct ctcccagctc
      601 tcaagtaaga tttaactttc tcatttagtt aattaccgag tgaggatcat cattttcccg
      661 gatcggagcg gcacagagcc tttatcgtgt taacttgtga acttgatcga tggctgctgc
      721 taaaacttaa taacttcac
//
LOCUS       KCPA01001751             323 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 192578tic ultra-conserved element locus
            uce-7659, sequence.
ACCESSION   KCPA01001751
VERSION     KCPA01001751.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 323)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 323)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="192578tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>323
                     /note="ultra-conserved element locus uce-7659"
BASE COUNT          107 a           79 c           44 g           93 t
ORIGIN      
        1 gcgtctgttt acaaacacca tttatatgtg agtgtcacat gctcccagac agcatgccag
       61 gagagagatt taaacaaata tgtctttctc taaatgctgt atgttcccct ggtctattca
      121 tttcattctg ctttatctat caaaaatata ttaacccaaa agcctgtttc catcaaagtc
      181 ttgattccat gaacatttaa agataagcct tatcttatta ctggtgcatt aacaacagaa
      241 atctaaaggg ctactgtcaa tcatctccct cccctcaaaa cagttctggc agacacaaac
      301 acacaagaca ccaacaagca caa
//
LOCUS       KCPA01001752             385 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 192681tic ultra-conserved element locus
            uce-3314, sequence.
ACCESSION   KCPA01001752
VERSION     KCPA01001752.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 385)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 385)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="192681tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>385
                     /note="ultra-conserved element locus uce-3314"
BASE COUNT           95 a           78 c           94 g          118 t
ORIGIN      
        1 ggggtgttta agggtcagct cagccatctg taggtgaggg tctccttgca gctcttgtgt
       61 gctttaatcc caactcgggg gagtgaagct gtggcaacct taagccatgc cattattcct
      121 tgcagcccag gaggtaccca gtgtttgtca tttaggagtg tcatctcatt acattgcata
      181 ttgcagtgta atgatgtgaa atgattaaat gacaaaatgc cagctcactg ccccttaagt
      241 agcacacttt taaaagctat tattaatttc tgtatagtct ttgccagaaa ataacacaag
      301 ggaggtgggt ttaatccttt ttctaatttg caatgagtcg tgggagtgct gtccacctcg
      361 agagcatatg tccagtgcca gtggt
//
LOCUS       KCPA01001753             668 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 192790tic ultra-conserved element locus
            uce-4313, sequence.
ACCESSION   KCPA01001753
VERSION     KCPA01001753.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 668)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 668)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="192790tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>668
                     /note="ultra-conserved element locus uce-4313"
BASE COUNT          193 a          153 c          110 g          212 t
ORIGIN      
        1 gggctggtat tataccacca tgttcagaac cccatcccaa acccactgac ccatgattca
       61 aagcatcaaa gtgttcaaat cacagcatcc tactattttc ctcacctttt caattttaca
      121 caaagcatca gctgatatag gaaacgtgat cttattgggg caattttgtt ctctgagcct
      181 gccaactgct ccgagctaaa caatcaatgc tgtccttctc aactttttcc tttccaatta
      241 attaatttaa attgaccatt aagtcagcag agtttttgat tgatattttc attaacaacc
      301 ctctcatgca gacctgtcca acacctaaga aatgtatgat aatgtccaat ctgcatgaag
      361 gggtctgaac atctcccttc acctctcagt gctagtgagt tattactcga attgtgcttg
      421 ctgtttcatt gagtgtaatt tgaatacaga ttagctgccc cagtgttcca gagctttggc
      481 attatcatta ctggggacag taatttgact gatgaacaca caggttatca caaggtcatc
      541 accttcacag tattggaatg gtccatcgtc ccaattttgg agggaaggcg gctaaacctt
      601 tcaatagcaa aattaagtcc tgtaaattaa cttgtccgat aacttattga ataaatcctt
      661 tactaatt
//
LOCUS       KCPA01001754             646 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 192898tic ultra-conserved element locus
            uce-1136, sequence.
ACCESSION   KCPA01001754
VERSION     KCPA01001754.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 646)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 646)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..646
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="192898tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>646
                     /note="ultra-conserved element locus uce-1136"
BASE COUNT          229 a          106 c          123 g          188 t
ORIGIN      
        1 ataaatagtc tttgtgggaa actggagaga gagattgttc cagtgtctac aaaatacttc
       61 aacagactga caagagagtc acatttgagg caaacattaa atagcaccaa catgctaaat
      121 gatgatagaa aaggcaatag ttcatagaaa tatgtgtgtg tctgctgtac acaaaaggca
      181 aatagctgtt ttgaactgtg aagactattt aaaggtttag tgtacacctt ggattcctgc
      241 tgtctacata agtacagaga cctaaatcca ctgcatactg ggactaactg atcaaagcag
      301 tagttaaatc tatccatgga aaatctaagt agtctttgga ggcaactctt tgaatgcaga
      361 ttagtgattt cattgaagta gtcaatcaac tttttttctg gttgttaaaa tgtcactgag
      421 tgaacagagt acataaaaaa aatgatgagc aaaaaatagt atttcaactt gaacaaactt
      481 gctatttgta gactggatca catgaatctg cttcagtcaa gatcatttca gaggtagcta
      541 caggaatgaa tcccacaaag ggactaagtt taatcatcca atcccagact gtattgattt
      601 tggaactact tgcaatgact atataaataa gccatttctt tgcaac
//
LOCUS       KCPA01001755             659 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 193007tic ultra-conserved element locus
            uce-6959, sequence.
ACCESSION   KCPA01001755
VERSION     KCPA01001755.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 659)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 659)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..659
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="193007tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>659
                     /note="ultra-conserved element locus uce-6959"
BASE COUNT          197 a          126 c          110 g          226 t
ORIGIN      
        1 tccccagtcc agtcacctac ctggatggag ctcacgctca gggagattga cacgggataa
       61 atgaaacaat cgcacccttt ccgtagggct ttccagtgaa ttgtacaata atccttggga
      121 tgagtcataa taaaaaataa acatccagat agcttaaacc attgcttgca ttattttctt
      181 atttaaatat cctaagtgtt ttctaatgct gcacctacct ctcagtcaca aatgctgcct
      241 tacagttcaa agatgtttgc tttaaagtta atcctttggg ctctgtaaaa tggacctttt
      301 gtctaatcaa tgcaaattga ttttgctatt ctgtattgac ctctcaaccc tttgactgtc
      361 catggtaatt tctttcttca cctgataagg tacctgatcc ataataaatc aattctaatt
      421 agtttggaga cttcactggg agcataagtt tgttgaaaaa aagcagcagg tttcaggtag
      481 ctttttcata tctctccatc tgtagttata ttttttgcat aagactgtct tcactatatt
      541 cttggataat cctgagtcat aaatatatac aaatttggga tcgtactgat gaaatataaa
      601 ataatctaaa acagagagga gctgattctg gatttaaacc tgaacttttg atgtttaat
//
LOCUS       KCPA01001756             627 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 193117tic ultra-conserved element locus
            uce-5037, sequence.
ACCESSION   KCPA01001756
VERSION     KCPA01001756.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 627)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 627)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="193117tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>627
                     /note="ultra-conserved element locus uce-5037"
BASE COUNT          200 a           89 c          123 g          215 t
ORIGIN      
        1 ttcagaataa aatgtctgat tgccaaaagg actattttga aatactcaaa agcactgggg
       61 gccaagtgtc actgaaatac ttccctgatt tttgtatcaa taaatgaagt ttacaataat
      121 gctttggctg gaagatattg agttgcatac caggatacta ttaagttacc aatattgagt
      181 aactgttcta tatgtctcta gatttgttga acataatgtc tatatgttaa acagttttct
      241 atggtattta aaaattgaca tttcaaagag tgtaatagca taatgaaatg taaactgaaa
      301 acaggaatga gttaattaga ctaatgatcc cttgactcct ttattagcca gctctttaga
      361 aattgggatt agctttgttt tctctgctga ataaagacag gaaggatggt gttgattcta
      421 gtaaatgaca gcaccagaag aaattagtgt tttcctgttc gttataggtt tcatcatctg
      481 agataaaaat ttagctttcc tgcatgcata ccttcacttg gactgggaaa ataatttagg
      541 actgcctttt taagggtgat tatgtgattt ccggacttta tgactgtgca aacctggagt
      601 agattgggtc tgaatttaaa tgaagtc
//
LOCUS       KCPA01001757             727 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 193334tic ultra-conserved element locus
            uce-3560, sequence.
ACCESSION   KCPA01001757
VERSION     KCPA01001757.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 727)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 727)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..727
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="193334tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>727
                     /note="ultra-conserved element locus uce-3560"
BASE COUNT          237 a          144 c          145 g          201 t
ORIGIN      
        1 gccatgcaga tgacaagtcc ctttctgaac acctttggag agttatctgt ttgtaaaagc
       61 ctcctatgtc aaagaggttg aaggaaagct tatgaagaga gggagagaaa gcaatggaag
      121 accaaggccc ctctcatctt acatgctaaa gaaatgatgt cttttctaaa ttacgtgcag
      181 acttgtttcc attttcatat tctttaccgg gggttttttt ggaagctaca gaaaatgagc
      241 ataaaaaaag tactttgccc tgcaggaata cagaaattgt aaaagcacag gcagcactac
      301 agaggagcag tgccattcac tcacaaagaa ttttgtgcat gtagatggct gattaattgc
      361 tggcctgcct agacgaagct gcaacgagcc agatactgtc agcatgccat ctgttaccat
      421 ggaaatgcac aatgttcctg tttctgacaa acccttgaat actggataga ttgtgccata
      481 tgtaaataag gcaaattagt tttcctatat cttccagaca aggttagact aaaagaaaat
      541 atatctgttt atatactgta acctccaaga tgtgaactag gcaaagcttg ctcataaaaa
      601 tctcgttcaa tttgctgtta gaactgaaac agcgtggact agcactaccc aaccagcaat
      661 gtttacaaaa ccagtactta aaaatatgca tattctatat gcatgccaca ttcacgatga
      721 ctgttgg
//
LOCUS       KCPA01001758             612 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 193443tic ultra-conserved element locus
            uce-2887, sequence.
ACCESSION   KCPA01001758
VERSION     KCPA01001758.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 612)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 612)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="193443tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>612
                     /note="ultra-conserved element locus uce-2887"
BASE COUNT          197 a          137 c          102 g          176 t
ORIGIN      
        1 taatagtatc agttcttgag gcctgaaatt gcatagaatc tgattaacct ttcataggaa
       61 gaaaatccaa aaggtaaaat acagttcagc acctattccc agtgcttaat aaatacagga
      121 aataaaggac aagcaagttc ttgcaaatta aagatgtgga gcccagtcat ttcaatccct
      181 ttcaatatga aacaaatcac tcacactggt cacgaagaca gctccctcta cactcaaatt
      241 attcacttga agataagctc ctatcaaact ctttaggggt ttaactaatt tactgcacag
      301 atacagcacg tctgttgtaa taacaggtag gatgtattgg ggtcgaccat ttatcagaat
      361 tagacttctt ttttcaattc acagtgaatt atgctgccta cactgctcct ctttctcaga
      421 gcttcccatc cccttacggc ccctaatgtg gcaggcaaac aaaattgaca gtctcatctt
      481 gtcaacaagg ggtgattctc ctgagaagcc atttaacttt gcagaggaag caatgtatta
      541 atgtgcctgt cccaggaatg ttaatcatct tcaagctccc tctaactttg acatgaacaa
      601 aatcaccaaa tt
//
LOCUS       KCPA01001759             551 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 193657tic ultra-conserved element locus
            uce-7552, sequence.
ACCESSION   KCPA01001759
VERSION     KCPA01001759.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 551)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 551)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="193657tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>551
                     /note="ultra-conserved element locus uce-7552"
BASE COUNT          173 a          109 c          110 g          159 t
ORIGIN      
        1 gaccagaagt gcatggtctc atttttcttc ctttggacac cccaacaccg ttgctcaaca
       61 gcatcgggcg caaaagcttg acttagcctt gaaaattttt tcctaaacat ggcaacaagc
      121 gcaacagatg caattctttc taggtctcta ggtaacattt gaacctgtgt aatgttcgca
      181 gcaccgcacc gtaagtaata ttccaggaaa tgcgctgccg cttgttaaaa aggataggac
      241 cccagagatg cctttaaata tgcctgtaaa gtgagaggtg ccaagagaaa gataatatgg
      301 ctgattatag ttatttacct tacattttca ttcgccctta actgggtgta atttaggggc
      361 atgaaatctc ttattggaag tgtatttgca ttaaacagct ctaagcaacc atgaaagtgc
      421 agaagctgaa aaattgacag actgggtttc tagaatccca aagtagcata ataggcatac
      481 aaacaaatca aataaacatg ttttgcttca acgatttaaa gaatatggtc tttggagtaa
      541 tttgtctcct t
//
LOCUS       KCPA01001760             674 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 193763tic ultra-conserved element locus
            uce-4504, sequence.
ACCESSION   KCPA01001760
VERSION     KCPA01001760.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 674)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 674)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="193763tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>674
                     /note="ultra-conserved element locus uce-4504"
BASE COUNT          220 a          115 c          110 g          229 t
ORIGIN      
        1 tcaccttgaa aatgaactaa attgttgtaa aacaaataat ttacatttaa attacttatc
       61 tccttttcac ctaatttaaa agtaatcttt actctttctc aactaacacc taaatttatg
      121 agctagtttg atcatatttg tgcaataaaa ttgaaaattt taggtatggt aggtaatcag
      181 ttttagtctc ctcatctgtg tttccaatct cattacagat tgcaattttc agtgcagatt
      241 acatgatgac ccatcagtgg ctttgttgtt tctgaattac tgattcctcg actattgcca
      301 gataagaaca aagactatgc atcagtctga cagcttgcaa acagaaaatg ggcttgtagg
      361 attggattta aatcccaggt gtaggggata attaccacat cagtcatgca gtaactgaaa
      421 aatggtattt caacaagaaa aattgtattc cttttatagt gccaaaagaa atcatttttt
      481 gaggcttcat actgattcag tgcatcatta cttgtgcact gtactcatta aatgtaatgt
      541 ttgttttgtt tcagatactt ttgtggctga gttagctcaa atcaagattt gtgaaacctt
      601 ggcaatgctg aggtcattca aaggtataat atacattgca caagtgaaac agcagagccc
      661 aaaacatcca aaac
//
LOCUS       KCPA01001761             476 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 193871tic ultra-conserved element locus
            uce-5855, sequence.
ACCESSION   KCPA01001761
VERSION     KCPA01001761.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 476)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 476)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="193871tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>476
                     /note="ultra-conserved element locus uce-5855"
BASE COUNT          148 a           86 c           84 g          158 t
ORIGIN      
        1 tttttccttc tctagcagtg gaaatctcac acttctggaa ctttgacaca tcactgacca
       61 ttagagaaca tggattccct gtttaatgct ggttcttggg tcttaaacag ccctccactg
      121 cttttattat accattaatt gcacttaatg cagctgcatt tctagtacgc ttggctaagc
      181 tctgaaaatt aagtagaggg tactttgtta taaaatgcac tgtaatgagc tctggtggga
      241 cagggtctgt taagtttgaa attacctcag gccatttcca aaggtcttct taaaatattt
      301 cacatcgata aaagttcgca actagataaa tagccaaagg gttgagaagc tacagccctg
      361 aaatatgcac tggatgaaat atgaataata ccaaattgat aaatttattt taacttttat
      421 tatctcaggt aatttgttaa acagaaagtt ttcaagctga cagcatgtaa atttta
//
LOCUS       KCPA01001762             833 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 193985tic ultra-conserved element locus
            uce-1886, sequence.
ACCESSION   KCPA01001762
VERSION     KCPA01001762.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 833)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 833)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..833
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="193985tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>833
                     /note="ultra-conserved element locus uce-1886"
BASE COUNT          243 a          151 c          160 g          279 t
ORIGIN      
        1 cattctgcct tggccaactg tttcccattt cagtcataga ctaaatgttt tcaaattatg
       61 caaagttcag gtcctttcat aaaatcatta gtatttttgt ggtattggaa atatttcaat
      121 agttgctttt attgaacaaa agtctatacc atctacaaaa ggaaatattg aaagaaaaat
      181 atatatggaa agcctttatc agtaaataga attagtctcc ttgcatttat aaatcaaata
      241 aatggaaagt gtgttgttat gaaacatgac catgtcttat ctgaagaaga aaaagatcac
      301 aatggcatta ggaaatgctt gactttagtt agagaggcgt aagggcacaa gaacagatga
      361 tggtgcccta atagcccttt ttaagaatga cagggccccg ccattagcat ccttttatat
      421 ccttggaaat tgctcatgcc tcgcttttat ggttcctatc tgcctgactc ttttttattt
      481 ctctttcaat ttcatccgcg ctcggataag cgcatgctaa cacaatatga ttgagctgta
      541 aaatggaacg ctgtcgcctc taatctcttt tatgtagata tggaggtact tccacactcc
      601 acttcattct ctctccattg ttggcctttt tagaatgtgt tgccgagtaa tggaggctca
      661 gtcaaatatt agagctaggt ttcacagggt gtgataagaa gattatcagg ccagcagtca
      721 gatctattgt tgttctttgt gtcagattaa aatattctga tgtactgtaa cttcgttagt
      781 aaaatactga aggtgcttag gggatgctgc ttcgtctcct gcctgatgag aca
//
LOCUS       KCPA01001763             741 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 194096tic ultra-conserved element locus
            uce-655, sequence.
ACCESSION   KCPA01001763
VERSION     KCPA01001763.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 741)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 741)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..741
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="194096tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>741
                     /note="ultra-conserved element locus uce-655"
BASE COUNT          220 a          100 c          139 g          282 t
ORIGIN      
        1 tttgtgtttt cttgtaaatg tttcttttcc ccttaaagca acaaatattt catttgtaat
       61 gcttatttta ttacgagctt caaggagagg acgagtaagg tgtgaggtta caatttgtgg
      121 ttgctgatac caacactgcc acaaaagggt agttgttttt aaaataacta gctagccgag
      181 tggtagatgt ttaatttttt aaattccttg tacaaattcc aaaaccaact tcaaaacgtt
      241 ttcacttgta ttgattttat gttgaatgga tcccaagctc tctcctgtta attctatacc
      301 tttgtaagac atttgtatat tgcggaagtg ttcattcaag ctatttaata cctggcactg
      361 ttaatacaca gtactttatt gtacagattg ttttactgtt ttaattgtag ttctgtgtac
      421 ttcggggaaa taggggctgg catgtttttc tttgttttct ggcaatacaa catgtaagaa
      481 tttgaagcat tttgtttgta gatgctagag tgtcagaatc cttttatttg acttttctaa
      541 gaaaagcatt ttcagtcttc gtagtgtgcg cttaaggtta taactgattt tattgaaaat
      601 ggtttcaaag tattcagaat tgtacaggac tgtaaaaatt tgttgacaga cattgaagga
      661 aaagcttata gaagctataa aatatatatt aggttctgca gaaaattgag agttatgtaa
      721 tatattgtac aaatgtaagc a
//
LOCUS       KCPA01001764             708 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 194207tic ultra-conserved element locus
            uce-1419, sequence.
ACCESSION   KCPA01001764
VERSION     KCPA01001764.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 708)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 708)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..708
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="194207tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>708
                     /note="ultra-conserved element locus uce-1419"
BASE COUNT          213 a          142 c          144 g          209 t
ORIGIN      
        1 tcagatgcca tgaatttcaa attaatagag atgtttactc tctaatacaa aatttataca
       61 tattagctta taaaatataa atgtgctcat ttcttactgc aaaatacagc atttccattt
      121 aaaactgcag agactttggg caacactcag gcttaggaat acctcacatt tcattttggt
      181 tagcctatta tttgtagttt tgaaacttta ttggtccctg atctaatctt ttctgagtat
      241 gaaaacatta acatatggtt taacacagca cagggctgga aagtccatat cccaaatgca
      301 cattgtatgc agggtgacat tcacactaaa tatcatccca cagggtctgt actccatttt
      361 acctgggatt ggagagccat gaaatctctg gaaaagttgt tcatgagtct gaaccaaatg
      421 gcgtgcagtg tactgagata ctagcagcgt gtgctgctgc caaaggttgt ggctcaaatg
      481 tctctctaag taacattaaa aatctgctgc ttcatgccta tgaatttcaa tatttatagc
      541 gttcaataaa atggtccact gtcagagaga gatgtgccac tgtgcactct ctgagcagat
      601 gggctgcaat atggcacatt tacatggacc agctgtggag tgcagaaatg aatgctggtc
      661 agaggcaggc tggaggcgcc acatctggaa tgcaaacaga cccgcctc
//
LOCUS       KCPA01001765             635 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 194315tic ultra-conserved element locus
            uce-1499, sequence.
ACCESSION   KCPA01001765
VERSION     KCPA01001765.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 635)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 635)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..635
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="194315tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>635
                     /note="ultra-conserved element locus uce-1499"
BASE COUNT          183 a          131 c          130 g          191 t
ORIGIN      
        1 tcctttaata tattgacatt ccagcccttg gaacaaggtc ttcactcctt ttctcatttc
       61 gagatcttgt tttgggagag ctctaacacc tgtccactga tcgcctgcca gtctgcatct
      121 gtgcccagct gacagagctg tctgctttga ctaatgatgt gattgatgga caaaataagg
      181 aagaacacac aaaaaaacat ttctgtctgg tctggtgtgt cagcaagcct tcatcaagtg
      241 gctgctgaag gtatattttg ctgcatgcct cattacacag taatggcatt cccaggcaaa
      301 gctgtttctt ttcatgacac aagacagcag gcagctttat ggactctggg cctatcgagc
      361 ctggaggaga gaagcactaa agagtggtca tttccaaaag tgcctcaagt tgcttttttg
      421 ttgtcatgaa tttaatatga atcaacacaa tatgaaatga gcatgaggaa ttttagtgac
      481 tagtcatttt ttaagactgc tgtctaaaca gccatcaagg ttttcttcta ccaaacctgt
      541 tgcaaaaaaa agtcatctgt caattttatt acattaaaaa agtacacaga ggtgtatagt
      601 ccaaacaaat gcgtgcttca gtgctaagca tgtgg
//
LOCUS       KCPA01001766             809 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 194425tic ultra-conserved element locus
            uce-906, sequence.
ACCESSION   KCPA01001766
VERSION     KCPA01001766.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 809)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 809)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..809
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="194425tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>809
                     /note="ultra-conserved element locus uce-906"
BASE COUNT          238 a          193 c          180 g          198 t
ORIGIN      
        1 acaactttgg ggacacaaaa ccagagctat tttagcatac tgtacacaaa ctccgagtgg
       61 caaacagtgc ttttggagaa ctaccaaaag aaattattca agttaagctt tattttggat
      121 atattcctga ttaagcctga gcacaatgaa aaaaacagtg tgaaggcaca atgctgaatg
      181 gcatctgtgc ttagagcttc agaggactgc ttactgtcat aaaactctgt gtgtcaccag
      241 ctgggggccg gggatttaaa gatgtcagga ggacctggtc tctcagatgg gataaagatc
      301 agaaggaaag ctgtccaggt gatgcccagg cccctgaaca agcctatctg cactctcatt
      361 caaatgataa tgagtgtgta aatcacatct gttccccctc tgtgcctgta tccttgtcac
      421 ctgaatagca tccccaccag gtatcaaatg agctccagga aataggtttc ttttttatcc
      481 aacttcgctc tgaaatgaga aaatgagcac cctggccagg aggccctgca aaccaaaagg
      541 gattgcagtc tttgggctcc tcgccaccaa ggaggcttaa ttgtggtcgg cgacgccaag
      601 agcctaaaac aaacgccggc acggagctgg atgctggagt ccctttcgca acagccacat
      661 aaaagtaggt tgataattag tgaccattga ctttaatgat gtaacgcgct aataatggca
      721 ttgaaaatca cccctcattg tctgtaatac caacctcgat cctacctatc agacatctct
      781 ctgcacccag cccaaggaat gccgggatt
//
LOCUS       KCPA01001767             675 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 194537tic ultra-conserved element locus
            uce-215, sequence.
ACCESSION   KCPA01001767
VERSION     KCPA01001767.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 675)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 675)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..675
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="194537tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>675
                     /note="ultra-conserved element locus uce-215"
BASE COUNT          197 a          131 c          142 g          205 t
ORIGIN      
        1 catacaacag attgaggctg gtataaaggc ctgggactgt gcaagagcac cctgctgagc
       61 ctcagctgtg cttgcaatta gcaataggca tgaaatgatt attgttgtgg tggctgatgg
      121 caatctgaag tgacaagttt tatgggggaa gttgtagtag ggatgttcag caagtttctg
      181 caaaccatta atcgaaggct gcagcacagt ttagtcaaag ctattttatg tcattccaaa
      241 ggtctcacaa ggatgctgaa agaatatttt tctgctctca gtgccttttt ttctaggtca
      301 gggattcttt actgccctat ttagtgtcaa aaatacccat ttgcctcaaa ttagcagaaa
      361 gcttgtagtt aagggctaga gattaggcat acaaaattac tcagcaggtg actgctgggt
      421 ggatttgggg ttgagaagtc tttaaaactg actacaagac attatatact tctgacaaaa
      481 gaacatagta atcctacctg cttgctttaa ccactgttgt ttgtctatta ttatgtgctt
      541 taatgctcat aagagcaaaa ctactggtga tactactcaa ttaccatagt aactctcccc
      601 tatgacctct catttcagta ctcgctttcc aaccagaacc aatccaagca ggggaaatct
      661 atttaaaact gtgac
//
LOCUS       KCPA01001768             452 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 194643tic ultra-conserved element locus
            uce-5234, sequence.
ACCESSION   KCPA01001768
VERSION     KCPA01001768.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 452)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 452)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="194643tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>452
                     /note="ultra-conserved element locus uce-5234"
BASE COUNT          150 a           72 c           90 g          140 t
ORIGIN      
        1 agagagaaca taaagcaaac catgtatttg agcacctgat gtgttgttag ctatattgta
       61 ttgatataga gaaacacatg aacttccaga aaatgtttga gtgctgtgat ttaaaagaga
      121 cactagaaga ataaaacaaa accagaaaga cagtggttaa ttgacctttt ttgtgccttc
      181 tggttcattt agaaatagaa attaaattaa catgataatt cagtcctact gtgttaagac
      241 tgccataaac ccattaaatt ttatggccac tggtttaaca tttttttcta ttaactgagt
      301 ttaattttca atattgttgt gcaggttctg aaaagtggta gcttgaaaga acccaggtgg
      361 atgaatgact gtggagttgc ttgatgccag tggctcagtt atgaaaagca tgatcccaga
      421 ctctcacagg catacactga ttctggcacc ca
//
LOCUS       KCPA01001769             618 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 194749tic ultra-conserved element locus
            uce-5893, sequence.
ACCESSION   KCPA01001769
VERSION     KCPA01001769.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 618)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 618)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..618
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="194749tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>618
                     /note="ultra-conserved element locus uce-5893"
BASE COUNT          146 a          120 c          111 g          241 t
ORIGIN      
        1 tgtatgaacc aagtagctcc ggctgttact tcttattttg cacacccaaa tttcgtttca
       61 aactttggag ttttatttct gagatctgag aaataaaaac tcaaacacca catggtattt
      121 accacatgct gtgactgata aataactaag tctccataag gtcatttcag aaaactgcgt
      181 gtgatgtttc aacacagttt tctgtgtatg atttctcttc aaataattat ttttgtatgt
      241 ctttattttt ccatattatt tgtgagtttc tcttggtttg gttttggcta tgatttttta
      301 atgagtggtt taaatgtgcc ttcttgtttt ccttatggcc tatgacctat cacctttctg
      361 ttctgtgact ggctgtctct gcttattctg cattaggagg tacgtatctg attgctttcc
      421 agtcccctct tcttcagttg ctcattcttt tattttcttc ctccttttcg ttgtggcttg
      481 ctttttccac taacagtggt gctctgaggg actggcatgt cagtgtaact cacatgcaag
      541 tgtgttctgc aaaagaagaa agcgtttaca tgcaaagcag aaaaataagg atgacctttt
      601 ctcattcacg gaagaaca
//
LOCUS       KCPA01001770             828 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 194862tic ultra-conserved element locus
            uce-62, sequence.
ACCESSION   KCPA01001770
VERSION     KCPA01001770.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 828)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 828)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..828
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="194862tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>828
                     /note="ultra-conserved element locus uce-62"
BASE COUNT          287 a          184 c          146 g          211 t
ORIGIN      
        1 gcttccaatc atgtctttcc ccaatggcaa gcctgtgcaa ttaccagcac tccaggaggt
       61 ctacagacaa gcctttaccc tgcaaacaaa atacagcttg taggccatac cagctgccaa
      121 accacacaca tagtgatagg tttaaagagg tctgaaaatc tttctaactc catagtatag
      181 gcaataaaaa tataactgta cctgcaggaa agaaagcttt aaatgacact gtataatgca
      241 cacaataata caaactccaa cttaatcaaa atgataatga cgtatgccaa tcctacatta
      301 cttgaaattg agcgattttt atgttctgac aagtttacag aactaggata aatggcatga
      361 atgatttcaa tatatgctca tacttttgaa ccaaatggtg aaggttaaaa tctttccttt
      421 caagggcctc aatcagccac aaaggaaaac agtaatcact gtcttttcag ccagcccaac
      481 cgcatttgtc agccctttct ccgtcaatgc agccagagca atcaacctgc caaacattca
      541 gaatggaaaa acaatctgaa aatacagggt ataatgcacc tgccagtgaa aatggccatt
      601 tcaagaaaag ctagtgatct cagtgaccct gctgaggagg cggtggtgca aaggggaaag
      661 aacccgtaaa agaattctta gtgatctcca ctctcttgca cattgacact tccttacaaa
      721 gcatgccaat tacagctttt gtgctactta aaaaaaatga aagctttttt gggcaaaata
      781 atcacgcaaa gaaacagaga gacacttctt tttcgatgga ttcgcatg
//
LOCUS       KCPA01001771             560 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 194967tic ultra-conserved element locus
            uce-2938, sequence.
ACCESSION   KCPA01001771
VERSION     KCPA01001771.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 560)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 560)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..560
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="194967tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>560
                     /note="ultra-conserved element locus uce-2938"
BASE COUNT          136 a          141 c          149 g          134 t
ORIGIN      
        1 cggcttcgaa actcagggag gagacagaag atattgggtg aaaagctggg gaaggtgggt
       61 gctgaaggct gagccccggg caggctggga atcggccagc ggctagcctg aggaggggct
      121 cacccgaccc agctaagagg agatttcgct tctctttggc tttgtgttcc gtgcagaggt
      181 gaaaataagc cccgccctgc cttcgggagg ctacttcaga caaaactgtt atccattaac
      241 atccaattat cacttggttc aagccattaa ttataaatca gcctcctaat tgggataatt
      301 agctctctgc tacttaatgt agtatgactg atgcgtttgg aaagaaggta atcagtccat
      361 ttgtttaacg ttaggcgaac aaatccaact ctcatggttt aatttcagcc tcagccttcc
      421 cagcaccatc agcattcaaa gctcattgca gctccattaa ttgtttggga atcacggcgg
      481 ggatgggcac acgcatctcc gcggggcttt cagtagcccc cagcccaggg atgcgaccgg
      541 actcgccctc cctcgagggg
//
LOCUS       KCPA01001772             706 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 195077tic ultra-conserved element locus
            uce-2823, sequence.
ACCESSION   KCPA01001772
VERSION     KCPA01001772.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 706)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 706)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..706
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="195077tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>706
                     /note="ultra-conserved element locus uce-2823"
BASE COUNT          186 a          155 c          131 g          234 t
ORIGIN      
        1 aaagatggaa aacgacgctc caaggtttgt aaatgtgttt gtctttaagg tttgttccag
       61 aggaaaccat gcgtgtctta gctcgctcaa taagcaaacc cttacacgat ttttaaacat
      121 gctaatgctc acattctgca tctcaggtta atcgagaagg gttttttgtt ggttttctgc
      181 tagcagcttg cctacaatcc accaacccac cactctttat gtatatatgt tgaataatta
      241 tgaagctgtg agtatttatc accttttctg agcagtaagc agaaagaaat acaataatat
      301 tacttccagc tactggcttt cccaagataa ttagataaca cagtggactg aagccttggt
      361 tagcccaatg ctgttcaagt taagtgattg acatgcctct gtctggctgc tctattaact
      421 gtttcatttt gttgctattt gcagtttgct tggctaatac ttcgaacaaa tacagactgt
      481 ttctttagcc ccttttttct ctttgacctt ctcctgccca ttttctttga gtcacttcaa
      541 actgccttga aaaggcctgt tgaatgtgca cagtccatca gagtcccagg ttcatcccat
      601 tccttgccct gaatgctcta cttcaaagat gggccgcatt ctttaattgc cctttgaatt
      661 aatatcaaag ggtcacaatg cgagtgccag aagagaaaga ggcttt
//
LOCUS       KCPA01001773             765 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 195184tic ultra-conserved element locus
            uce-1216, sequence.
ACCESSION   KCPA01001773
VERSION     KCPA01001773.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 765)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 765)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..765
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="195184tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>765
                     /note="ultra-conserved element locus uce-1216"
BASE COUNT          219 a          174 c          185 g          187 t
ORIGIN      
        1 tgtatccttt ggtgtttgca gcaccttcca tgagcctgtg cagcagcaat gacaaattca
       61 tcagtccttc ggcgaacaca agtccagagg agctttgctg ggagctcagt gctgctgcct
      121 gaagggtggc aaaggggaaa gaaatttctt cttacgagga caaaaaccaa acccaaaaac
      181 ctgacctgac agaacaaaaa caaccccaac gagtaccttg tagtctttta aagcctcatg
      241 aatatttagt ttgtcctcat gtaaaatata tgactttgtg taaggatcag gcaaaggagg
      301 tgcatgattt ttttctgatt tatgggccca gcaacggatt attcatagca gagcagctgt
      361 gtggaaagat tcatccactg caaaatgtga ttgtacatca ggcagtgtga gggaacagag
      421 ctatgactaa tggctacttt acatataaat gagaaggttt gcgctaggaa ctgtaaaaaa
      481 aatacaatcg ctcagctgac gggcctggcc tctttatcga gagtgctgca caggggccaa
      541 ggaaagccag gaacaagcct ggctgagagc gctgtcttct ctcacatcct tcaacatgca
      601 ataaatgagg caacagcagt ccagacttcc aagagtcgaa tttgttgctg gtatcaacag
      661 atgtttctcc accgccttga atgctcctct cctggccagg ctggggtgga ccctgctttg
      721 agcatcatcc tcagaagcat aggggcacca caagccaggg tgctt
//
LOCUS       KCPA01001774             598 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 195295tic ultra-conserved element locus
            uce-1774, sequence.
ACCESSION   KCPA01001774
VERSION     KCPA01001774.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 598)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 598)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..598
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="195295tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>598
                     /note="ultra-conserved element locus uce-1774"
BASE COUNT          184 a           93 c          116 g          205 t
ORIGIN      
        1 ttttgagtct ttttctaatg tcattctaaa gttaaaaaac aatttgactt caagggagat
       61 acagcccaat tttttaaaaa cttaatagga ttagtcatgg gaactatttt tagcaaaagt
      121 tcaactttat ccatgtattt taatgtggga aaagtgtgtc cttttccctc tgctaatgtt
      181 tgatgtattc cagccctcct gcgagtgtgt ttgagtatct taggggctct ggagtggagg
      241 agaacttcct ctcggattct ctctgttttc tttcgtgaaa atgacattcc taagctgttt
      301 cactttctga caggaaatgg agccttgcca aaaatgatta aagtccaaga aagcataaca
      361 gttccaaagc tgcagcagtt ctttaggagt cccgagtttg acattgtgtc aaacaaatgt
      421 gaaatattgt ttaataaatt tgaataatac agggaaaggg aaaaatggtt cttggcttat
      481 aatgctggtg ctctttatta agtctgtaaa ggcctgccta gctctaataa attgaaatat
      541 atacataaat atacttgtgc atggataaca gtttaatatt gtaatatata atgaacgg
//
LOCUS       KCPA01001775             593 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 195400tic ultra-conserved element locus
            uce-2748, sequence.
ACCESSION   KCPA01001775
VERSION     KCPA01001775.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 593)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 593)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..593
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="195400tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>593
                     /note="ultra-conserved element locus uce-2748"
BASE COUNT          180 a          127 c          110 g          176 t
ORIGIN      
        1 aaaaggcaaa acaaaacagg tagaattcct ctgttactat taacacctaa aatatgatca
       61 tgaaacaaaa gctttgctcc tctgtccaat ttgatgtctt tttcatgctg cctcagtgat
      121 ggccaaataa ttggttgttc acttgtgtcc ttgtctcccc cgacagttcc acagatgccc
      181 tgaacaatgc tccaaagact gctttcagta ggggcaaatc ctcattaatc attcctggct
      241 gacagcacaa gggaacacct gcatctggcg ctgggaccaa gcagtggctt ctgggagcgc
      301 gcattaaaag accaaccaat tcaagttgtg agagtaggct tctaatagcc atgtgaaaaa
      361 tccctctctc gctggatttt cctttcatta aatagctaaa attagacctg tggctcctgt
      421 tgagattaaa atatcaatgt attctaagca aatcaggaaa tgaacagtac tgtatgttat
      481 gataaatggc tgctaaattc tttatgtcta gatcaagcaa tgttagcatt aaatactgat
      541 gaactgtcac ataattttca tttagaaatg actgcacttt gagcttcatg tcc
//
LOCUS       KCPA01001776             711 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 195513tic ultra-conserved element locus
            uce-7534, sequence.
ACCESSION   KCPA01001776
VERSION     KCPA01001776.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 711)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 711)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..711
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="195513tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>711
                     /note="ultra-conserved element locus uce-7534"
BASE COUNT          218 a          175 c          107 g          211 t
ORIGIN      
        1 gtcataatct tttgcattta tattctctat ttgactcaag atataaaacc aatctgatct
       61 ggtataaaac tgccaaatct gtttcacaca aattctgcct gtctcgcgag agagtgcaca
      121 ccaggcatcc tcattaaaga tatgtaatta aacaagaaag ggttaaagcg tatgttagcc
      181 tattctactt ttctatctat tactttttaa aagctttcat atgtcttctt ccttgtttct
      241 gaaagctaac cattccttct tcctttcagg aaagctgaca tttgacagct taacatagct
      301 gacagggtta cccaacagct caccctccct attctcaatc caattagacc tctaatcctc
      361 cagatgaaag gcccaactac tcacgttcct catgacaacg acagctattg attatttgtc
      421 actacagcta acaccttctc tgtcgaggcc actctgacag aagcaaacct accaaattag
      481 acagcacttt atctgccctg gaggccaaat ggcacaacaa gtaaaggcta ataaatggta
      541 taaaaatgaa caaatcataa cattatgaca ggttgatcgt tgccagcagc ttcacagctc
      601 aagcttgatg ctctgttaga cctgttcctt ctcttttctc ttccactcct gcaccaactt
      661 tgactgaatt aaaggccaga acaattaagg catttgacca gcaaagataa g
//
LOCUS       KCPA01001777             487 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 195622tic ultra-conserved element locus
            uce-4573, sequence.
ACCESSION   KCPA01001777
VERSION     KCPA01001777.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 487)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 487)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="195622tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>487
                     /note="ultra-conserved element locus uce-4573"
BASE COUNT          147 a          107 c           89 g          144 t
ORIGIN      
        1 cccgctccac tgaaacgtcc gcgccgcgcg agtgcaggac gctaaacgag cgcaattaat
       61 gcctttgaaa caatttatga tttccggcct acttcaacat gtattagcat atacctggtt
      121 tctttaatat acactttgtt tttccaaaac cacaaacata gttgctggaa tttcatgtgg
      181 aagtgcttaa ggggttgaaa gttaacacct ttgtgagccg agcagtctca cagttgctgc
      241 taaacaaaag cctctttgta gaagctttct cgaaatgttt tcttaacatg ttccaagtag
      301 ttttaggcag gcaactaaag taaacaagat gttaccatga taaaaacact tgtgaaaaca
      361 ttacagagtg cacttagtag tttctttcac ataaactccc cttcgaacac aggactgcca
      421 gatctcaggt ctgtgtcctt tcttttaata tttgattaaa aaaagccagg attaagcacg
      481 tctaacc
//
LOCUS       KCPA01001778             490 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 195729tic ultra-conserved element locus
            uce-3678, sequence.
ACCESSION   KCPA01001778
VERSION     KCPA01001778.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 490)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 490)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="195729tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>490
                     /note="ultra-conserved element locus uce-3678"
BASE COUNT          115 a          135 c          106 g          134 t
ORIGIN      
        1 ataacaaatg actgatacag ggagaggaac cagagagtct gctggcgtca ccctccctcc
       61 ctctctccct ccctcacgct ctttcctcct cgtgtaattt gcattaataa agaggctgtt
      121 ccttgtcgga atgtgtttca tccggtttaa aatcccaggg cgatccacca ggaacagctc
      181 tgggagaatc cgactgtcag agccgacaag acaaatgaat cccggtgtca ggagcgtgtg
      241 gttcaacgat gacagattga gaagaactgt ccccctctcg acaggcgggc ttcattttca
      301 aattaataaa tctgaataaa atattttccc tttcattacg agccgagccc ggatgacagt
      361 tcccgtgaca ggagggagtc gcagtgttga tgaggagact ttgcatgaat tccacctggg
      421 cttcttcggc tttattttta cctgcaattt catccctgtt tctctctccc atgctcccct
      481 tccttcaccc
//
LOCUS       KCPA01001779             794 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 195845tic ultra-conserved element locus
            uce-2698, sequence.
ACCESSION   KCPA01001779
VERSION     KCPA01001779.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 794)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 794)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..794
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="195845tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>794
                     /note="ultra-conserved element locus uce-2698"
BASE COUNT          230 a          185 c          137 g          242 t
ORIGIN      
        1 gttagattga aaacacctat ggcaattctt ttcaaagctg ctcctcccta catggtaatc
       61 attcaagtgt tgtcttccaa attggctcct ttacttcatc agtaaaatgt gctataattt
      121 gctactgccc aatcctcatt aatcttacac attgcgcagt agctgttgtt gagataactg
      181 gcttccatta gcaaccatgt gattggcagg acgataaagt cttttccctt gcaggtcagc
      241 tgctttttaa gaagagggca atcctgctga tccatctttt agctacagtc tctcactgag
      301 tcccaaatct cctgcctttt agctttgata cggttcaagc tttccccctt gtatcagccc
      361 ctacctgtca tcagctcctc tgtaccaaac agccaatatc aggagtttga cctcagggca
      421 cagtccgggt gggcaggtaa aacctgacca ctggacctac ttccttatct ttcatatcct
      481 gcaattcatg aagaagtatc aaattcaaac taaaaaacag aagcatgacc ttttataaga
      541 atcttctgaa aaaagctctg ttgcctttca aagtattctt gaaaagaact gtcatctacc
      601 ctattaagac agaaatggat cacaaataag aagtgggaaa gcactgaaaa tccttactaa
      661 atggtagaag tttttgatgt gtgactgcaa tacttttggt gatgcacaca ccaaatacgc
      721 ctacatctgc aagctccagt tgcaacccaa tagagagttg accaaacttt tcttgtttct
      781 aaagtatatt tagt
//
LOCUS       KCPA01001780             684 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 195954tic ultra-conserved element locus
            uce-7473, sequence.
ACCESSION   KCPA01001780
VERSION     KCPA01001780.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 684)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 684)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="195954tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>684
                     /note="ultra-conserved element locus uce-7473"
BASE COUNT          230 a          120 c          128 g          206 t
ORIGIN      
        1 gttcagaata tttttgccta acaattaaat gtatgtttta cacttccagt aacatttaaa
       61 ccttaagcca ctctaattaa gagaaatcaa taaatttatt cctattgcca gctttaaagt
      121 ttatttgcta ataagcaact ggacaaggga tgtgtgaaat gaatagttga agaaaaactc
      181 tgacagcaaa agagaggtct ggagggtgaa gttggtttat taggcaccgt ttgtcatgaa
      241 tgagtctact gcacgtacaa aagcaaatcc cactacctta gaagattaat tctgaaggag
      301 gcactcgtgg gtcaaagtat acataagcgt gtgcctaatc tcagagaaat caggctattt
      361 tctcacagca attaagcaga ggtctagggt ttcacccaca gtgtatttaa acacaggata
      421 caattaaacc ccaaagtatt aatatctgtg ctgtgcaaaa ttgcccagga aatagatttt
      481 gcactctttc aaatggaaag caaggcaaat taaagatggt gactttattt gagtaaaaat
      541 tatcctgaaa caaatgtaag taataactgt taattcctta cgtacacctt tttcctgctc
      601 acgtaattta ctctggaatg tgtcgttcag tggatttaag caatcaacac catctcatga
      661 agcagttttg ctttcagggc tagt
//
LOCUS       KCPA01001781             737 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 196065tic ultra-conserved element locus
            uce-3995, sequence.
ACCESSION   KCPA01001781
VERSION     KCPA01001781.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 737)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 737)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..737
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="196065tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>737
                     /note="ultra-conserved element locus uce-3995"
BASE COUNT          220 a          166 c          133 g          218 t
ORIGIN      
        1 tcataatggt ggtagcatag attagtcacc taatcacatc tcaactctta accaggacac
       61 agaaccacag cagtcaaaac accgacaagc cagagagccc caacaccaca ccagccagtg
      121 ttggattgca gtcacaggaa ttttaagcaa caaggacagg tgtgttcttg cccttcacct
      181 tcaggagggg attatgtgct gttccacatt ggtgtgcatc caaccatact tctttgtaga
      241 tcccttttct tctttggaag caaactagaa gcctgcatta gcatgctgta ttttgctctc
      301 aacactagaa atactgaggg tgctatttgt aattgtattc ttttaagagg tttgttctct
      361 gcagctgttt tctgcttgca gtgtattttg tgtaatcagc acatcatcat aaatacattg
      421 gctgttcccc cgagggaagc tgtcactgtt taatttacag aacaacctgg ccaatgtgaa
      481 ttctaacact acagcactat ggcaagaagt taccacaatc ggaaaaacag gtttctatga
      541 atttttatat caagagctgg tcccaggaca atttagtttc tagaaataga ttgattttaa
      601 aagcactcta tacactggat gaaatagatt ctttcccatt tacagcctct taaggcagca
      661 ccaaattcac tctcacatta ttttaaaggt gacaatctca catgaccatc ttcactgact
      721 tttaccaaaa gaaggca
//
LOCUS       KCPA01001782             632 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 196172tic ultra-conserved element locus
            uce-5457, sequence.
ACCESSION   KCPA01001782
VERSION     KCPA01001782.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 632)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 632)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..632
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="196172tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>632
                     /note="ultra-conserved element locus uce-5457"
BASE COUNT          172 a          119 c          173 g          168 t
ORIGIN      
        1 tccataattc atggggacgc tgagttcccg ccgcgccggg gtcggcttca ttacatcctt
       61 taaattgttt agaaaaatgg tacattataa atgttggaag taccagcaag agcaaatcac
      121 agccttgtcc aggggctatt cttgctctgc ctgagcatcg ggaagccaaa gcatatgttg
      181 gatgttagcc ggggtgtaca caacgtgtcc tatttattca aggtttgctt tgaagccaca
      241 acttacaagt ttgtttctta gggggacatg tcagactgca tttagcattt gttggtatta
      301 ggatactcct gaatagcaaa aaggcaacag gggggagaag gcggcagcta tctgagcagg
      361 gatctgtcag atccacttag gggctgcggg agagctggag aggaggcaca gggaggggct
      421 gggctgagct caggatctcg ggcaggattg ttctaaagca ctttaaatgg aagaattaat
      481 ctccatttaa attatatgga gttcattatg ataagaacta ggaaaaccat taaagcaggg
      541 atccagctgg ccagagtgtg tcaatgtaaa gcgttcagca attccaagtg gcacagttct
      601 ctttagatac attattttgg gtgcttgcag gc
//
LOCUS       KCPA01001783             569 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 196282tic ultra-conserved element locus
            uce-6912, sequence.
ACCESSION   KCPA01001783
VERSION     KCPA01001783.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 569)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 569)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="196282tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>569
                     /note="ultra-conserved element locus uce-6912"
BASE COUNT          185 a          107 c          113 g          164 t
ORIGIN      
        1 gagaaagaga gaaagaaaca gaagatcaaa agagagcttt tttttccctt ttgcttttca
       61 tgcctcagaa cctcaaagga ggtcggggaa caatcaggct taggggtctc gtgtgctttc
      121 tggcaattag actcagctga tgggctgaaa gggattgaat ggcagggttc aaggcccttc
      181 tccagagctt cagacaacag gcttttccaa agcagcagag cagcagacac cactgaaata
      241 atttcaaatg gagacttaca gccagggatt cattaattca ccggcctaaa caattactgg
      301 aacatataat gtctctatat acactttgat aaagactgtc atcctagacc ttcattttct
      361 ccatttttat tagagatttt taatgtcagg tttgaaaaga accctttatt tcttcaatta
      421 tcaaattaaa ccttttatat aaattccaga atttttgttt tatggctaca attgatttga
      481 attacaagag gagactgaga aagttttgta aagcatcctt aaacactcag gcaaaaatag
      541 gatgggagcc tcagtagcaa gagatccca
//
LOCUS       KCPA01001784             529 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 196388tic ultra-conserved element locus
            uce-6964, sequence.
ACCESSION   KCPA01001784
VERSION     KCPA01001784.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 529)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 529)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="196388tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>529
                     /note="ultra-conserved element locus uce-6964"
BASE COUNT          152 a          104 c          133 g          140 t
ORIGIN      
        1 ggattcctgc aaggaagctc ctgcaaagca acaggcggca gcctcttcct ttgcttggat
       61 ttaaatgggt aaattatttg aatttctcca cccccaggtg aatgatttag atggccttga
      121 ccccaggctg actgcaggga ttaatgtggg ataatgattg ctgaggctat cattgcagca
      181 ggcatcatta attatcctta ttgattggag ctttcaaaga taaagcatta tgctgactgg
      241 aaaataccct cttcctgcaa ggtcaaggct aaaatagggc agctaaataa ttgcattaac
      301 aaacaaagaa ataaaaataa cctctcgcag agttgtgtaa ttaagatcca attacagcgt
      361 ttggccctgc tggcggagca gccttgcctt gtgtgggatg tgggatacag gagggggatc
      421 tcatgggatc ctgccaggtt cacctgcagc cctgttggaa atactcctgg gatgggaaat
      481 taaaagggtc atatggagaa aatgataaat ggcctacatc actttgggg
//
LOCUS       KCPA01001785             590 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 196491tic ultra-conserved element locus
            uce-2517, sequence.
ACCESSION   KCPA01001785
VERSION     KCPA01001785.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 590)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 590)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..590
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="196491tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>590
                     /note="ultra-conserved element locus uce-2517"
BASE COUNT          189 a          113 c          107 g          181 t
ORIGIN      
        1 ccccttgact atatcctcac tgcaattttt atcatcaggt gttatcaaga tggaagctta
       61 agcttatgga gggtttgaag catataaatc ttggcttctt ttttaattgc aaagaattgt
      121 gactattgtg cagctgatct tgcaaattca aaaatactca gtactataat tatgcttact
      181 ttatttaagt gctaaaggcc acagcaggcc tgcaattgct agcatgctaa cagcatataa
      241 tacagccaat tgcaaacagc agtctaattt gttgatttca actgaggtgt aattatattg
      301 cttcatttgc tgagcaaatc atacgagagc ttctctaaat cagcctgatt gtgtaatgaa
      361 gagctaatta caaacagcag tgttcttgca gtaaatttat ggtgactgct aatgccaggt
      421 tggcaccact atgacaatgg ctcattagta catttacaaa agcaacagtg aaattctgcc
      481 caaagcacag caactgttcc ctatttcagg agatgagagt gattaaccct tcaattgtta
      541 ctacaaggaa ttatacagca cttctggaaa agtccaccat aagacagaat
//
LOCUS       KCPA01001786             685 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 196601tic ultra-conserved element locus
            uce-7342, sequence.
ACCESSION   KCPA01001786
VERSION     KCPA01001786.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 685)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 685)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="196601tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>685
                     /note="ultra-conserved element locus uce-7342"
BASE COUNT          191 a          145 c          136 g          213 t
ORIGIN      
        1 tcctctgctg gtgttatacc ctttccccac tttgttttta ttcccaccac tatttaatat
       61 ttattatttc tttcagttca agaggagatg cagatgctaa tgttagtcat tttttagaga
      121 tgggattgtg ttgtcagcat gcttgcacat gatgcctatt gcctctcaga gtgctctggc
      181 tcaggcggca tggaaacagg ttcactcttc caaggagcac tctgcataat gaaattcctg
      241 ggctgactgc acaataagtg cttttgcttc atcacagtca tgctttctta catcattaca
      301 gttaaatttc caggcaccaa aacctacatt gaccctgaaa cctacgagga cccaaataga
      361 gctgtccatc aattcgccaa ggagctagat gcctcttgta ttaaaattga gcgtgtgatt
      421 ggcgcaggta aggctgccgt ggcttcctga ttcaactgtt ccatttagcc gggatcgaaa
      481 ctcatacatc ataatgacag gcaaataatt atacctcagg tatagaagaa ctttttgcat
      541 ttgccagagt ggttaagagc aatgaagctg cacttgcttc tggaaaagcc caacaacaac
      601 tgaaataaat gagtaaatta aaagtcttgc ttgacattga aagcttatgg gtttttaatc
      661 aagtgtctgc tgttaaaatt gaact
//
LOCUS       KCPA01001787             681 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 196712tic ultra-conserved element locus
            uce-6117, sequence.
ACCESSION   KCPA01001787
VERSION     KCPA01001787.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 681)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 681)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="196712tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>681
                     /note="ultra-conserved element locus uce-6117"
BASE COUNT          231 a          134 c          101 g          215 t
ORIGIN      
        1 agtgcctctg tctctcctgt ggctaccaaa taaagttgtc aaaattattt ttaaattatt
       61 ataagggatc taaaccaaat actgtataga aaaataagga atatatcagc atttaaaatg
      121 tatatgctgc tgagcatttt tactgtcatt tctttaagaa aagcagatct aattagctgt
      181 atctccaaag tgtgtaccta gcatttttat tatgtattat aacattttgc ttagagttga
      241 catttttatt ctgacaagca ctgtctggag agctctcaat aaataataca tttacaattt
      301 tcagtaaata agcactggac acaaatcgtt atccttactt acagctgccc ctctctaata
      361 gtgcttttac aagtaaggtg actattcagc ctaatgcaat actctcagtg ctgggaagat
      421 attttcattc attaccccag tcacaagcac ttaaagtact tttaggccct gttgcaaaac
      481 agcaggaatg gcaaagcaag taagaccaac taaaactaaa gtccatcacc aaagaaacct
      541 gaggccattc accctccaga acttgggaaa taatgacata caagatcagc catgttcaag
      601 cccaatcctt atatttattt acattagcaa ttttaggaag agaagtatca catctagtcc
      661 ctactattat tgccatttta a
//
LOCUS       KCPA01001788             559 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 196823tic ultra-conserved element locus
            uce-7364, sequence.
ACCESSION   KCPA01001788
VERSION     KCPA01001788.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 559)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 559)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="196823tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>559
                     /note="ultra-conserved element locus uce-7364"
BASE COUNT          215 a           88 c           89 g          167 t
ORIGIN      
        1 catgctcatc ttaagttgta actgagaatg tcccttcttt aaattaaaaa gggaagtcta
       61 ggctttaaat gagaaaaata taacatcagg ctccaaaaag ccactttcat tttcatataa
      121 atatgtaacc atcatttgtt taactcacac caagctatca aattttgtgg tgggctataa
      181 acttgttgag tcattagcct ggctgcttaa tggaggaaaa ctaaatttct gttcctgcat
      241 aatgacactt attcacagta gacatttgca tcacttggaa acgataaaac ctcatccttc
      301 ataatgaagt tctgagctga caaagaggaa aatatagtgt tgtgggacaa ctatgaatat
      361 aaaacaagct taataaagaa gtagtgacaa attatattat gcaaaatgca atgcaataaa
      421 aaagtgttac taactcattg gaaatatcat aaataatcta aatagttttt aactgtcaaa
      481 gtcttgaaaa aaaaaaaatg aggtacagaa taaatgccag tttaattgcc accatatttt
      541 gacaagcatg gagaacctt
//
LOCUS       KCPA01001789             443 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 196928tic ultra-conserved element locus
            uce-2955, sequence.
ACCESSION   KCPA01001789
VERSION     KCPA01001789.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 443)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 443)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="196928tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>443
                     /note="ultra-conserved element locus uce-2955"
BASE COUNT          124 a          113 c          101 g          105 t
ORIGIN      
        1 gccaacctgc cctcccctgc tccagctctg cattatttac ctgccaggag ctgggctcaa
       61 gccctgggga gagcaaaacc tgtttgggtt gacattgagt atccttggtg cagcaagtca
      121 ggacctcgga ggtatccatc actgcggctg cctggaggca ggctggagcc aaggaacttg
      181 cctgagaagc tagtaaaatt ttaatgcact ctgtagtgtg gtcatgtcat actcagttat
      241 ggcaaataat cccagatgcc tgcagaggta aaatggagct gtaatgtgct tgcctcctaa
      301 cccgagctga cagcaatgat gtacgactac cattagcgga aaatatcact tcaactaacc
      361 catgatccag ctccgctaag ggtcacatta tccatgagga acaaattaca ctcccaaagt
      421 aaatacaaat tttctacacg aaa
//
LOCUS       KCPA01001790             382 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 197036tic ultra-conserved element locus
            uce-2165, sequence.
ACCESSION   KCPA01001790
VERSION     KCPA01001790.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 382)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 382)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="197036tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>382
                     /note="ultra-conserved element locus uce-2165"
BASE COUNT          125 a           73 c           59 g          125 t
ORIGIN      
        1 actcatcaaa agcatcctaa acttatcatg aagggaactg gcttcttata tgactgtgac
       61 agatctcaat gtgacacata atggtatgta accaccatca aggcaatttt tttttttgct
      121 tacccatcat atcttttgcc ttcttgaaat gtttatacca ccttccaaat tcctgacatt
      181 ttgctgctga gacatttgca tagtaagtgc tgttcacaat ggaagaaatc atactctgtg
      241 tgaaaagggg agaagtctgt aatacagagc agtacaagtc aaagcacaaa ttatttcaat
      301 tgttgccatt atatttttaa agtttgagaa ccatattttt aaatcctatt ccaaagcctt
      361 tttgagcatg aaaacaaacc aa
//
LOCUS       KCPA01001791             354 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 197143tic ultra-conserved element locus
            uce-7609, sequence.
ACCESSION   KCPA01001791
VERSION     KCPA01001791.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 354)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 354)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="197143tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>354
                     /note="ultra-conserved element locus uce-7609"
BASE COUNT           94 a           79 c           77 g          104 t
ORIGIN      
        1 atgcagtgct attgatgtgt gtttgtgttt taatcacagc tggaatgcaa aatcaggctc
       61 cacctttcaa ctctatctcc atcatgctga gagagtgaga gagagcgaga ctgagtctgc
      121 tagacagctc gaaagagatt gcagctcaga tgtcctggaa aacagcaaat ccctcagacc
      181 tggcagattc cgttaccatg agaactgcag atatttccat tgtgatggct tgctgtagca
      241 gccatctgtt acacccattt gattaggaag tacagttcag cttgtatggg attttcactg
      301 caccttatcc tatggcagcg tacagaaact ctctctcttt ttatatgcta aact
//
LOCUS       KCPA01001792             429 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 197247tic ultra-conserved element locus
            uce-2129, sequence.
ACCESSION   KCPA01001792
VERSION     KCPA01001792.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 429)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 429)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="197247tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>429
                     /note="ultra-conserved element locus uce-2129"
BASE COUNT          146 a           68 c           80 g          135 t
ORIGIN      
        1 ggagattgtc ttggtgactt cttgtattta aataagaaag ggaaacatgg gagctctagt
       61 ctcttgagct tttcctaggt acctactaat tgttaattat tagagactaa ctaagtcact
      121 gaagtgagtc gtttggctgg tgtctcaaat gctgtcattt actactacac aaatcagcct
      181 agtgatagag tgtctttaaa ttaggttaca accatgcagt tattggacag ggagtaattg
      241 ataaaaccat tagtaacact tgtagagata acagctagca aaatcatgca accataatta
      301 ttcctaatgg atacatgcta taaattgtgt caagaaaaaa aatcttgcat tatctttcaa
      361 tcaaatttga cagtcctggt agattactgt aggctaaatg ctcatgtata aaaaaatgac
      421 ctatcagaa
//
LOCUS       KCPA01001793             583 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 197357tic ultra-conserved element locus
            uce-4792, sequence.
ACCESSION   KCPA01001793
VERSION     KCPA01001793.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 583)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 583)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..583
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="197357tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>583
                     /note="ultra-conserved element locus uce-4792"
BASE COUNT          148 a          115 c          117 g          203 t
ORIGIN      
        1 agaaaagaga ttttatgcca ctagattttg gatacaggca ctgttgcctt tgtggcaagc
       61 actgggaata ctcaaactaa aaaatgaaat atgtcacaga tgactcagtt tgttttgttt
      121 tcatcccaga gcctaattca gtagatttat ctgcaacaat tacagtgctt tgatcactcc
      181 agaataggtg gtgtagtgtg gggtgtagct gtccttttcc aattcactct ccttatcagg
      241 atacatgtct gttgatttgt gggaagctgg ctgtttttcg ttcctgacaa actccagtga
      301 ttaaaatgta gtggcttgct cttgttcccc tgataaaggt gacagctgca gagtttccag
      361 tgttagtgga tatggtccat gcagattgct ttttaatgaa agcaatatat tatcttacct
      421 agaggccctc cagccttacc ttgttaatgt attctagctt ggcaccacat tcatctataa
      481 attagttgta ttaaacatgc ttcttactat ttatccagtc tctaaagagt tgtggttctt
      541 ttggttgggt aactttgcct catacctcct ctagcagcac cat
//
LOCUS       KCPA01001794             838 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 197467tic ultra-conserved element locus
            uce-940, sequence.
ACCESSION   KCPA01001794
VERSION     KCPA01001794.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 838)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 838)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..838
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="197467tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>838
                     /note="ultra-conserved element locus uce-940"
BASE COUNT          254 a          151 c          135 g          298 t
ORIGIN      
        1 atgtactatc aaaaatggat tacagaaatt caaatgtgtt tgtaaatgtc atttcagatt
       61 aaccttgcag tataatccag tatgatccac attacttttt aaaatgatgg ataggttacc
      121 atccaaatta tttgtaagac ataaatgacc attgtatgtc tctttgaagt tagaggatgt
      181 attctgtatg actcaatcat taaatcatct tacaaatgtc taacaaagca cctgcattta
      241 accatacttc ctatatttac atttttggcc tctttctaag atcaggcata aatccatcag
      301 gccactttag aacttcagaa cttccttctt ttacatatat actgctcatt atccagaagt
      361 tattctgtcc cctgtgttaa attactttat gctgcagctt aaacgaacat gtcttgcttt
      421 catctggcat ttcaaatagg gcaaagactg ctgtacaatt tccaaacaca actgtgctaa
      481 cagagatgaa ttactacagt ttatataatt tatattagga attcatagac ctagcaaaag
      541 ggattagtac attttatttc agggtaggag atgatcctgt cattaatggt cgatactttc
      601 atcatctttt aaacctgagg aatttcctgg gtgacaagac tgtaaggaca tatcagggat
      661 tcacagctgt gagctttatc tggccgtgta ctgctttact ttcagtatgt ggactatgtt
      721 ccatcaaaac tggattagac tgtcaatcat gtcctgcaat gtatattgta ttatgatttt
      781 ttgaaaatgt cactgagatc agagtaattt cttggctaat tgcatcttgt ctcttctt
//
LOCUS       KCPA01001795             361 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 197568tic ultra-conserved element locus
            uce-4198, sequence.
ACCESSION   KCPA01001795
VERSION     KCPA01001795.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 361)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 361)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="197568tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>361
                     /note="ultra-conserved element locus uce-4198"
BASE COUNT           60 a           84 c           51 g          166 t
ORIGIN      
        1 ctggggcttt agaccctttc ctttgcagtt tctttctgtt cttgggttct ccaagtttca
       61 tgattttttg tatgttttgt ttctttaact tgcttcaagc tgctcatgtt gcccatcccc
      121 ttccccacac acccctcctc ccttacactc ctgttttcac ttgtaaattc tttctgtatc
      181 acataactat atgatgttga gttgctgttt gtatgatttt tctcttaagt tacatcttta
      241 ttatatttta gggcccaggg atcatcctga tattgttgat tcatttatgc aactcctggc
      301 acaggtgtgt tttagtttct tattcattca ctttctgttc tctctctttc tctttttaat
      361 t
//
LOCUS       KCPA01001796             783 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 197674tic ultra-conserved element locus
            uce-6347, sequence.
ACCESSION   KCPA01001796
VERSION     KCPA01001796.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 783)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 783)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..783
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="197674tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>783
                     /note="ultra-conserved element locus uce-6347"
BASE COUNT          214 a          181 c          238 g          150 t
ORIGIN      
        1 aggtgaagtg aagtcttttg aaaaggttgg ctgagcttcc aaagaaggcc aattgcccct
       61 cttgcccatt tccctaccac acctccacat tagccaagga agatcaggtg aggaacatgc
      121 tcctcatctc tgagcaagga gtcttacctg agaagaactg gctgatagag tgaggcagaa
      181 gagtgaggaa ggccagtggg tccacaaagg acatggaaag tgtagcagaa atgtaagcca
      241 tgcctgccac cagggagtca aggcaagcca gggaggtgta gaggcagaac atgatgaagt
      301 ttcgcatgtt cctgctcccg atgcagttcc ctgtgaagaa acagtggtgg tcatgcctct
      361 gggtgactct ggcacacagt ctacagaagt gagtgctggg caaggctgag ccaggggacc
      421 tgcttccatc cagccagtct gccacttctg ctcctttgcc caagtttaag tccttgccca
      481 agtcctcggg ggagttctgg atcacaagga cgtagttgcc cagggcatta gctgagagga
      541 agaggaagag ggccccatgc agcagagcag gcgagaaaag tggggtggtg gaagggtctc
      601 tgaacatgct ggggatgaag acaaagatct ggaggacgaa ggtcactagg gagatgcaca
      661 agaagtaggc tggagcgaca acattgagca acctgagaac tagcattgcg gatcacgttc
      721 ctgcagggga aagcaaggag agaaggaaca tcaccgctcc ggctgcacac ttcatccttc
      781 cat
//
LOCUS       KCPA01001797             728 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 197785tic ultra-conserved element locus
            uce-4586, sequence.
ACCESSION   KCPA01001797
VERSION     KCPA01001797.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 728)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 728)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..728
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="197785tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>728
                     /note="ultra-conserved element locus uce-4586"
BASE COUNT          211 a          127 c          172 g          218 t
ORIGIN      
        1 ccttcctcct cccagcaacg cttgtcctaa actgagcacc gtagaataaa aatggaaaca
       61 taaaaatagc agttggaaag ataaaacagc atttatagta ctaataaaac cgttgtggct
      121 tccacaggaa aacatgctct gtaacctaat gcttacctgg gaagactgtc gagtttcgga
      181 gagttatagc tgtttttgta agagaagcac agagatttgc ttcagggctg agtgatagat
      241 tctcctgcct ggagcatccc agtgtgttta tacatggctt gtatggcagc tttcataaga
      301 catttacccc atgatttgcg atgagcttat gtgtgaataa ttaatggcaa ttaatcctta
      361 attacagtaa ttaggcaagt cacaggaaat taagctgcag ctggagaaga ccatgcctgg
      421 gaagagagga ttgggggctg tgtgaatgtg ccattcactg acaacattac gaggatgagc
      481 agcattcagc agctttggca tttctattgg cagccttggg taggacaaga atgctcaaca
      541 ttagcagcaa tctatagttg tctacaagag tttttagttc aagtgccaaa atgttatgtt
      601 gcatatggtg attatctaag tttattggtt gccataattc aaatgggtgt aattgttttt
      661 ggcttgatgg tgacattaga aactgaagct tttatgtgtt cgtaggttct gctggcatca
      721 gccatggt
//
LOCUS       KCPA01001798             650 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 197897tic ultra-conserved element locus
            uce-6909, sequence.
ACCESSION   KCPA01001798
VERSION     KCPA01001798.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 650)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 650)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..650
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="197897tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>650
                     /note="ultra-conserved element locus uce-6909"
BASE COUNT          195 a          120 c          144 g          191 t
ORIGIN      
        1 gtgcttacac taatactgtt aaattagcta tgaaaataat tcatgcaagt tgcctttaat
       61 taagtgccag cgatttattt gttcgtttct cttttgccag gaaaagaaga atacattgcg
      121 acattcaagg gatcagaata cttctgctat gatttatctc agaaccccat acagagtagc
      181 agtgatgaaa taactctgtc atttaaaacg cttcagagga acggactgat gcttcacaca
      241 ggaaaatcgg ctgattatgt caatcttgca ctgaaaaatg gagctgtctc cttggtcatt
      301 aatttgggct caggggcctt tgaagcgctg gtggaacctg tgaatgggaa atttaatgac
      361 aatgcctggc atgatgtgaa agtaaccagg aatctgcgtc aggtaacagt acaatggata
      421 caagaataac tgactttgtt atgagtaaat gcttcatgat ttgttggatg tttagcaggc
      481 atttggttta tttgcacaag gaaggatatt cctgccgcac ttgagcaggg gcatatctag
      541 aaagtagtag tgcaagcagc tgtcgagaca gtaccttctc aagactttac tacagtgcaa
      601 ctatctgccc ttgcagcctt gcattagtca aggctaatga attacaactc
//
LOCUS       KCPA01001799             623 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 198005tic ultra-conserved element locus
            uce-5581, sequence.
ACCESSION   KCPA01001799
VERSION     KCPA01001799.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 623)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 623)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..623
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="198005tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>623
                     /note="ultra-conserved element locus uce-5581"
BASE COUNT          212 a          122 c          110 g          179 t
ORIGIN      
        1 ggcatagact aagaatttgc taagggtatg ttttcaaagg gagtagctat tgcttgttca
       61 tggcttaaac attatactat gccagtaata aaataccagt gatgcatgca aatggaaaat
      121 cgtgctgcaa aaaggttaat tcctttggaa gaaaccaagt ccctggataa aaagcatatc
      181 tcagccacct gactaacaca cagacatttc agtacagttt tattgtatac aaaaaatcta
      241 ataatatccc gcttttttcc ctaagattca gcaggtaaaa gctctgattg aatttcatct
      301 tgatttcatt aaatattcat aaaggccaat tagaagggca gctaagtagg ccacaaggct
      361 cccttccatc atcctgtcaa aggcagtcca tcagacagtc ctgtttgcat tagggcctgt
      421 agtcaatatc ttcattcaat ctttatgtag tatccctcta aatcactgct ccatcccact
      481 ttacggcttt tatggacaga caagggggga aaaaatctaa taattctgaa ggcaagatgc
      541 ttactcggta gaaagcaaaa tgcaaatgag aaaaaacatc ctcaatcaaa tgttggaatg
      601 aaaatctttt ctttaatgag caa
//
LOCUS       KCPA01001800             519 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 198113tic ultra-conserved element locus
            uce-3345, sequence.
ACCESSION   KCPA01001800
VERSION     KCPA01001800.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 519)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 519)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="198113tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>519
                     /note="ultra-conserved element locus uce-3345"
BASE COUNT          151 a          105 c           94 g          169 t
ORIGIN      
        1 atgaagaagt ggaaattgag ttttctgttc ttgtgctttc ctagcattca aagacagtaa
       61 atattctatt ggttaacatt taacccaaac taataggtcc aatctcacat actcaaataa
      121 atcataatgc cttttcaatt agtttgcgct tttgctcact gctgtcctga ataattagga
      181 aaacaattca cattttgcta ggagatgata tgaagtgtta ttcctgtgat aattactaag
      241 ctgcagttca gtttccctgg ctcccaccag gtcaccaggg cacaaaagag gacaccatga
      301 gagcattaat gagctctcat tgaagatgtt aaaaagcttg tattgatctg tttgtccaag
      361 aaggagatat ttaagccttt ctgctgaggg caggagagac agagattcat atcacaaagc
      421 cttttatcca gccccttctg tttctagctt caatattgcc cagtctcagc atgtctggtt
      481 ctggaggtca tacttttaaa ctttcacaac atctttttc
//
LOCUS       KCPA01001801             765 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 198225tic ultra-conserved element locus
            uce-4998, sequence.
ACCESSION   KCPA01001801
VERSION     KCPA01001801.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 765)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 765)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..765
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="198225tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>765
                     /note="ultra-conserved element locus uce-4998"
BASE COUNT          250 a          127 c          127 g          261 t
ORIGIN      
        1 gctttataaa gcattaaagt tctaagtatg tcacatggga gctgtaaggt ttaaatgaat
       61 aaatgtattt aatgcataaa atgtctaggc taatttttta attcctttac taacatattg
      121 aaaaaccata ctttattcat ccatcttagt tatactgctg tggttgtggt aatttaatat
      181 tcctgctctt tgctaatctt ctggttcaac agaagtaaac aataggtttc ataaattaaa
      241 aatacgctcc tcagaacatg cttctaaaga taaaaaacaa ggctgtaaac atttatgact
      301 gaaacaaact agattgttca aatactgcca tgatgtatca tgtatatcaa tatggcactg
      361 atatcagtta gaatgcaaac aaggttttaa atgatgtgcc ccttcatttc agctggagaa
      421 tccgctttac accatctgcc tatcagatgg ttaggaacca ggactgcgta ttaatgccac
      481 atgttcgatt ttcattcctc ttgtaatggt tagattcata ttgctaatag ctgtgcatga
      541 gcactgtcga tgaaatttgt gtgacgatgg agtgatgaga tatttataaa gctgcctgtc
      601 tcactgcata atcagcagga agaatgccag acataaacaa cttatcaatt tcagaatatt
      661 aatgacaact accattgact ttaatccact gaatattttg gcctgaataa aataaatatt
      721 tgtaaagaat ctgtttggtg tgatccttat tctttcattt cagtt
//
LOCUS       KCPA01001802             751 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 198337tic ultra-conserved element locus
            uce-6320, sequence.
ACCESSION   KCPA01001802
VERSION     KCPA01001802.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 751)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 751)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..751
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="198337tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>751
                     /note="ultra-conserved element locus uce-6320"
BASE COUNT          252 a          127 c          162 g          210 t
ORIGIN      
        1 tgtgcttctg aagctgtgtc tgtgcaatta cccaaaacaa ttttaagaac taggcagtct
       61 gattcccatt ttgagagaga gctggcataa aaagatagac tacagcaatg tattattctg
      121 attactttcc ttgtgtatca ggatcagtcc cctcatctat ctggtaagga gtcagaaaaa
      181 aaaagaatag atgaaatatt aaatgctttc agaaaatgag ggggaaagtg caccagcttt
      241 taaagagaat cagcatgtat catttctgct tccattggct gtttatccaa catcaataca
      301 acactttagg agccaaatta ctaaacaagc tgccaattag gcttgcagtc agctggatag
      361 attagtggct aagagaggca gatacaagat tttcatctct tgagccaatt acgcaagtga
      421 attaccatcc acaatgctcc ttggaagatt tgaggtagaa agactgactc tgctgtgata
      481 gacataagtg agatccaggg tagggggtaa gggttagcag gccatgtatt gcaaaaatta
      541 cccaagcaaa aagagatcct tctaggaaag gatttaaagg atttaaggct gctgggagcg
      601 atagaagagg aaataatagt tgtggtattg caaggcattg cttttctgct cacaagtctt
      661 aatcatacaa aagaaagatg aaagggcaag actatattta tgtacagtgt cattttctca
      721 gaactgttta aaatcctttt cttaacatca g
//
LOCUS       KCPA01001803             343 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 198436tic ultra-conserved element locus
            uce-4869, sequence.
ACCESSION   KCPA01001803
VERSION     KCPA01001803.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 343)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 343)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="198436tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>343
                     /note="ultra-conserved element locus uce-4869"
BASE COUNT           84 a           75 c           83 g          101 t
ORIGIN      
        1 taccctcccc aggcctgcgg gaagcagaga ttgcatctgc ctttaattac tccctctcta
       61 catatcagat gctcgtgcac cttctgcaca tgaatgctga ttaattgcag ggttaggctc
      121 cgaggcaggc cggaccacat tatttctgat gtttgctctt ttcacgagga gaataaatgc
      181 catgaatcca cagtaatcag tggcttttag cttgtcactc ttatgacact ctttacttag
      241 accaggaaat ggcaaatgtg gtggaaataa gaactttatt atcttttctt ttctcccaaa
      301 agggaggtgt gtgggggaag aaggtggtag gggcatcttg cgg
//
LOCUS       KCPA01001804             653 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 198538tic ultra-conserved element locus
            uce-367, sequence.
ACCESSION   KCPA01001804
VERSION     KCPA01001804.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 653)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 653)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..653
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="198538tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>653
                     /note="ultra-conserved element locus uce-367"
BASE COUNT          205 a          113 c          120 g          215 t
ORIGIN      
        1 tttgccgtta actgaggtaa tatcctctca atgtctgaga ttgttgttaa attcacaagt
       61 ttctatcaag gccatgtgga ggatacaaat ctgaaataga gaaaaacatt gggagactct
      121 tcagatatat tgtgctttaa tttataatgt ataatctata catactgtat aaactatata
      181 aagaatcaag caatcatgtc tttcagtgtt atctattgcc atcattcccc atgcattgag
      241 gctctcacta tagctattac tataaaacgt tccctaagta cataaaggct ctaatcgtta
      301 agatttttat taccagccac acatacagag ctgcaaattg ccttgtttca gatttattat
      361 gtattactct agaaattcta taaagatcaa aagaactgat tacaatgttg acctttgcat
      421 taactcatct gaatttaaat tcaagtgttt gatttgggaa aataagtcca tttatcatag
      481 gtctgctact gaggggattg tgcagccctg attgggagtg ctgagaccaa atttatttat
      541 tgagcatggg cttgaaaatt gtttgtagga caagaggaac gaaagtttga cctgccattg
      601 tgttgcaccc agggaacagt gtggcagctg cccttttcaa atacctaaca gtg
//
LOCUS       KCPA01001805             517 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 198644tic ultra-conserved element locus
            uce-2763, sequence.
ACCESSION   KCPA01001805
VERSION     KCPA01001805.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 517)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 517)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="198644tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>517
                     /note="ultra-conserved element locus uce-2763"
BASE COUNT          166 a          104 c           71 g          176 t
ORIGIN      
        1 cttgaatcaa tttaattgca tcagtgtttc tcagctacca tgccagaacg tgttgttctt
       61 gagtttaaag ggtctattcc tacttacagc agtctctaaa taaacctata aatccttgtt
      121 ctgtagcaca tgaattatca gtagcttcaa aataaatgaa gacaaaaatg gttgaatatt
      181 taaacgtgta gcaactccat cccgtgatag atcatttcaa accaaaattc attttttctt
      241 tgatatctac tactactata aacttccagt ttatcatata acattacaat ttatggtata
      301 accagcttgt gtactgacta taaacccttt gtcaatgcca ctgtaaagac tttatagtcc
      361 ataaataata gaagagtgat agtatctatc cttcttattt tgcccagcac atccagaata
      421 cagggctcta aacatgtcag aggatctgct tgtttcacgt acaatatagg ttatgtttcg
      481 tttctctctg acttacacaa agcccattca actaaat
//
LOCUS       KCPA01001806             666 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 198756tic ultra-conserved element locus
            uce-2574, sequence.
ACCESSION   KCPA01001806
VERSION     KCPA01001806.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 666)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 666)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="198756tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>666
                     /note="ultra-conserved element locus uce-2574"
BASE COUNT          186 a          120 c          145 g          215 t
ORIGIN      
        1 tttttttcag ttcaaagaaa agttactaat tttagtgata tttctcagtg gcttaaagca
       61 aaaatctgag gaggtagcag agaaatacag aatgatgctg ttgcgtactt tttttttttc
      121 ctctggtaac tgaaggttaa atgagtagca agcagaatgc cttaaacaag attggtatat
      181 tgattaaaac gctgatttaa cagctcgctt tctccctttg gaaacctgga aaagataagc
      241 cagctgctgt ctaagagtgc tgagtgtcca ctgagagtac actatctatc atcacaatat
      301 ggtgatgaga ggtgttttat gtttgtgtta atttccccca ctaaatcagt aattattaca
      361 atcctgtccc tgctgtttac cctgcagctg tttttccatt tgtcgagaga gcgggtgttc
      421 tcagaggacc gcacacgctt ctatggcgca gaaattgtct ctgccctgga ctatctgcat
      481 tctgggaaga ttgtgtaccg tgatctcaag gtagtaatca aatttttgca gagactatgg
      541 ggacaaacac aaagtaatta taaagttgca ctattcagag ttagtgggtc cgtgttcagt
      601 tttaagttct ggaggaagtt cttcgataca gtaatcagat gggtacattc cccgacttta
      661 acttga
//
LOCUS       KCPA01001807             749 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 198868tic ultra-conserved element locus
            uce-288, sequence.
ACCESSION   KCPA01001807
VERSION     KCPA01001807.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 749)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 749)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..749
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="198868tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>749
                     /note="ultra-conserved element locus uce-288"
BASE COUNT          215 a          157 c          118 g          259 t
ORIGIN      
        1 ggattctaat cttcacatgc gagatggcct tgaataattt ctgtgggttt tataggcaat
       61 tctgtggtga tcaaactact gtaaagagag acctgtatca acccatacct tctttcaaac
      121 atataatcta aggtgtgggt ggcccttctt tcttttgtgc catggtaatt tcttcatagg
      181 tggtacctga caagtccttt tttaccctta gagctttttg ttcagattcc attcacttca
      241 aaatatcatt accattgcaa acaaggaaaa tgtgtttatc agaaactgca aactccttta
      301 gggcctcata ggattaatca cggttataaa gttttattaa acacaatttt tgtttaatga
      361 caagctccac cagtccttcc cattccaaac caatcctgtc cttagggtgt atctagcaca
      421 gcagattgtt ttcaacagac tctcaagaca atccctatta ctttgtcatg cacagagata
      481 tttttcttcc tggataattt gaacttcctt aaaaatcaca tctgtttcat actttattta
      541 tttgtaattt aaatccttaa attgaatctt tcattactaa catctgggct tgaaatgcag
      601 cccacttgaa aaaatacaaa ttttatttta tttgtagtta cttcactcag tagcattggt
      661 acaaacattc cctggccaga ggcaaaacag ccgggtatct taaagctgtg atgccgtacc
      721 acgtgtaata tggctcactt gaatgtccc
//
LOCUS       KCPA01001808             700 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 198977tic ultra-conserved element locus
            uce-222, sequence.
ACCESSION   KCPA01001808
VERSION     KCPA01001808.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 700)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 700)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..700
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="198977tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>700
                     /note="ultra-conserved element locus uce-222"
BASE COUNT          211 a          123 c          154 g          212 t
ORIGIN      
        1 gggctctgca agctgttggg ctgtgtgtcc tattgattta atatgctcct aatcagtaca
       61 taaagctata ggcctgcagt gttaattttt catatgctta caaagtaccc tttgattttc
      121 tgtcacgcgt taattacagc gttttgccat taaataggaa gctttgtgta aactaattac
      181 taggtaatca ttgtctaccg ccagccctac cttttatttt attcgaaaaa tgcacagatc
      241 tcgcagtctg gaaccactat accttccagc cattagctct cactaattca tagcattatt
      301 gtgctaagat tgtaggagtt gtggtatcag tgctgttaat taccggagta aacagttgaa
      361 atggtgccaa ggtctattgt acaaggcaga ggaaaaggag gtttaaatgt tacttccacc
      421 atctggggac tggaggagag gcaaatgcta gaaaacagca gtgaggcaat atcagaactt
      481 cagctccagg gtttgaggcc atatggattc agaatatttt gaatcaattg aatttaagtg
      541 ccagtttgtt gcaataacag tggggaagga gaggataaag caagagcact aaagaaatct
      601 gaaatgcctt aatgttggtg cagccaataa aatgcctgct tggattattt taaaaatgtt
      661 tgttttgcta aaatccagta acacataggc aactctggga
//
LOCUS       KCPA01001809             436 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 199079tic ultra-conserved element locus
            uce-4359, sequence.
ACCESSION   KCPA01001809
VERSION     KCPA01001809.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 436)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 436)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="199079tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>436
                     /note="ultra-conserved element locus uce-4359"
BASE COUNT          132 a           71 c           89 g          144 t
ORIGIN      
        1 aagcagcaaa ctcttgatgg atgctgggtt tgtaggagct gtaaatgtaa attgtttttc
       61 ttctggccac ttatgtttta tttgaaacgt acaaaatctg tgtagttcct gagagctggc
      121 ctagagaaca gcagcactcc caagtagttt gtctcctatc aaatggcatt aataatttag
      181 tctctaatta aaagtgaggt caaacaatga aaaatgactg agctaaatgt ttacgctgtg
      241 atgtattaaa gtgcctggtg ggttttaatg gatggaagga gcgttgttat ttgtttatgt
      301 acaaaacact ttcagtcaaa gactgtagga gtcccaagga aacgtattta actaacatct
      361 tttacaggtt actgagtcaa tgtcttaaag agacaatttt tgcacacctt ttatatcctt
      421 caaattgctc agctac
//
LOCUS       KCPA01001810             693 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 199193tic ultra-conserved element locus
            uce-1329, sequence.
ACCESSION   KCPA01001810
VERSION     KCPA01001810.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 693)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 693)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="199193tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>693
                     /note="ultra-conserved element locus uce-1329"
BASE COUNT          238 a          135 c          110 g          210 t
ORIGIN      
        1 actctgaaga gtgaacccca ctgctaatgt ttttatttga ataaattatt acccaacaca
       61 gcaaccatca acattttaca gatttctgta atttttctgg ccctaatgcc agtcactatt
      121 gggagcattt agttataaat tgtctttcaa taaaagtaaa agctcccaaa acaacaaaat
      181 gaaaagacac agcagcttaa atcaaggaag tcaatttcca catgccgatc ctaaatattt
      241 catagcccta ttttattctg acatttgtag atgactaaag tgttacaaag gaaataaaat
      301 gctgattaaa gagttcactg tcataaaggt tactgaattg taaatggccc tttccatctt
      361 cctgttaata ggtacccagc tgtaaacatc atgaaggatg tgacgggagg cctgtgctgc
      421 tcctttagga gtcgtatata cattaatcac tgaatcacca agccatgctt aattgcaagt
      481 tgtatatcac acaaatccat ggtaagtaga aggaaactca ttattgctgc ttcataacta
      541 ctgggtactt ctcattttaa ccttctcaca cctgggacac tgttgtttta caatgtgaat
      601 gcagaaaagg cattaagtca ctaattatag taacattgta tgttaccctg ctgtttgatc
      661 tttcaaaata aaacaaacaa caacagagaa aaa
//
LOCUS       KCPA01001811             415 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 199298tic ultra-conserved element locus
            uce-2331, sequence.
ACCESSION   KCPA01001811
VERSION     KCPA01001811.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 415)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 415)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..415
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="199298tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>415
                     /note="ultra-conserved element locus uce-2331"
BASE COUNT          149 a           81 c           75 g          110 t
ORIGIN      
        1 attgtttggc tccattgaga agctacaaat tttatttatt gaacattagc taaaaaatta
       61 catgtgttta tcatctggat tattctcaga ttaatagaga taaatgacaa aacataatca
      121 gcaccaactc tgcaacttaa tcattgcatc tgagctatag gaaacactta attactctca
      181 tttactaggt gcaatctaat gaggagacat tagccaaatg aaaagaatgc agtacaaaca
      241 aacaaaatag ttataccatc attaaaaaga aactctgaca gtgcaggtga cagcgtatgc
      301 ggataaatta ccataatgtc ctaaatgctg agctgtcagc acgctaatgg cgatcggata
      361 cccagggaat gtcggcactg gagctgtcag aaccggggat catcaatcac ctccc
//
LOCUS       KCPA01001812             550 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 199407tic ultra-conserved element locus
            uce-6812, sequence.
ACCESSION   KCPA01001812
VERSION     KCPA01001812.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 550)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 550)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="199407tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>550
                     /note="ultra-conserved element locus uce-6812"
BASE COUNT          168 a          100 c          103 g          179 t
ORIGIN      
        1 tgctgcattg tcaaggaaaa gggtttggag tactgtcctt tagggagagc cgtgtctgag
       61 tgtcaccatc tgtgttatgg gagggtattt caagatgaca ttccttctgc aaggagaaaa
      121 accttagaag ccataaagtg ttaacttttt gtttttccag tagcctttca tatatcttac
      181 ttatttaaac tcactttgat ggtattggaa acacatttgc aggtaaatta catacatagt
      241 ccttttattg gatattgatt gtactgcctt gcattccaag gcagacttaa ttcaacaatt
      301 ccctaattag ttaaagtcat aacctatgtc ttgtattcat ttaccattaa ttaaacctta
      361 gctgtttatt acactgcagt ccaaatccaa tagcagaccc atagagccat ggaaaaggga
      421 ctgggaggtc aatattgaaa atatatggtg taaagtccca ctgatggctg cattgttcac
      481 aatcaatatg gtcaatgcaa cacaactttc ttagttgcta tgtcagcaag acaaaaagtc
      541 aattctaatg
//
LOCUS       KCPA01001813             738 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 199514tic ultra-conserved element locus
            uce-3340, sequence.
ACCESSION   KCPA01001813
VERSION     KCPA01001813.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 738)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 738)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..738
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="199514tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>738
                     /note="ultra-conserved element locus uce-3340"
BASE COUNT          229 a          177 c          112 g          220 t
ORIGIN      
        1 tatagacagc agaactaaaa atatttacga agagtcttct tctagaacaa gtgtatttta
       61 acactaaaac aggatcgtca ctatcaaagg tgcagtcctg ctccagctgg ttaacgacat
      121 tggctgaagt tctatgcaag ctcatcatca ttctttagaa tgtggtttgc cactccacac
      181 cagttaacct tataatcact aaataaaatg ctgttcctca acccatgctt acttatttct
      241 ggtacacaaa acacacctca tcttcttcat cagtgctctt tcctgatggc acattagaag
      301 tattttttgt gtcctcccct aaagcagaag catcaccatt agaagccagg gttccttgtt
      361 ccgcttccca ttcctgcaat acctcctcta agttaaaccg acgcctgtag tttacaaaga
      421 agttcttcac ttggccaaca gtcttgttgc caattacatc tgcaatagct tgaaaatctt
      481 taccatattt tcggacacct ggaaggcaaa gtaaataaca tagctgtgaa gaatcagtca
      541 gacacagcta cgtgtgatga tagagagaac ctatgggacc tgcaaacctc gctaattagg
      601 agaacttctc cattaaattt ccattaaaac aaaataattt ttaatagcac agctatcgac
      661 atacaaatca agaacttttt aattcattac ccattcttct tagatcctgg cttacctctc
      721 aacctggtct ctgacaaa
//
LOCUS       KCPA01001814             684 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 199621tic ultra-conserved element locus
            uce-2742, sequence.
ACCESSION   KCPA01001814
VERSION     KCPA01001814.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 684)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 684)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="199621tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>684
                     /note="ultra-conserved element locus uce-2742"
BASE COUNT          233 a          116 c          124 g          211 t
ORIGIN      
        1 gtgagttttg gggtgatttg agggggcttt ccatgcatca ctctccctga tttactagtg
       61 taagacaacg tgtaaaaaaa aggccattca cgtgctgaca tcaatttttc aagcaatttg
      121 agatcttaaa ctgttcacgg atatcagaac tagcattaga acgctaaaac agtacctatc
      181 atatttcata atgtatgtca taacgaacaa aagccttttt ttcactgtgc taaagtaaca
      241 atctagactt gttgtaagta tgttattctt acaagtagtt cgcagttatt cttgaaggca
      301 agtcttggag tttccttagc atagtgctgc tggggaaaat tttcagcatg tccatcttca
      361 tctctagcct gaagggaaat ataatggcct atttagggac tcacaaataa tggaagaaaa
      421 aaatagctaa aagcataaca gctcagatca ttaaaacaga cgggaatccc aaaatacaac
      481 attattaaaa agtttctttt cagtacacct tttagatatg agaacttggg atgctgtttt
      541 cttacatagc ttagattgaa catgcaaatt cattgtggag taataattag aacaacaaaa
      601 gacaaaacca aaatgaaata tttgagctgg aaactgagta actcagggtt tcaatttact
      661 ccattgcatt tttcaggatt acat
//
LOCUS       KCPA01001815             528 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 199725tic ultra-conserved element locus
            uce-7442, sequence.
ACCESSION   KCPA01001815
VERSION     KCPA01001815.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 528)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 528)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="199725tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>528
                     /note="ultra-conserved element locus uce-7442"
BASE COUNT          143 a          124 c          139 g          122 t
ORIGIN      
        1 tctaaacacg gattatcttc gctggacatt tgtttcggga gcgagttgtg ctaagcaaag
       61 gtacgtcaat tgataataaa cctgctccac actgtcattt gtgggtgatt tgaggaaaac
      121 cagaccatgt aatcaggtct aaggggtcct taataccaga gacgctggtg ctgtcagcta
      181 tagaaaataa ttagaacgtt atccctgtgg caaggagaat gtaaatacat ctaaaatacg
      241 acataatgtc attctcttct gtaagccagg ggatctgctt caaataaaag ggccattaac
      301 acaacaatta aagccgaggg ggccggtgaa gcagggagct ggcctggtgc agggcgaggc
      361 gagcggcgta aatctttcgc catcccagcc aggaatgtga ctattagccc tctcatgacc
      421 cgagggcttc ccaataatgc atctgctctc tgtcagggcc aggatttcgt aacgtcctcc
      481 agtgcgagcc cagggctgac tccacggtgc ggcgccaaag cgggagcc
//
LOCUS       KCPA01001816             409 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 199829tic ultra-conserved element locus
            uce-7689, sequence.
ACCESSION   KCPA01001816
VERSION     KCPA01001816.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 409)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 409)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="199829tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>409
                     /note="ultra-conserved element locus uce-7689"
BASE COUNT          159 a           57 c           87 g          106 t
ORIGIN      
        1 cctccccaat taaacagcaa attatactta tcaaagaaaa gaaggtaaag agaaatgaga
       61 aatctttaat taccagtata gtggcatgaa aagctgttga tccccttaga aacatacatg
      121 gccaattatc aaaaaatata agagatgcag aaagaaaggt ttgtctaata agtatgaata
      181 gcagggccat ttagaacatc agtgttaaag cattagagtt aaatggaaaa gtaaaaaggg
      241 gctgatggtt ttaactgttt cacaggagga caagaggttg atactgataa gacaagcagt
      301 atagtgaagt taattatctg cggcccttgg tgcacaaagc tttttgagct ggtgattaat
      361 agagataaac cattcaaact tcacatttct aaggtgaatg aagatggca
//
LOCUS       KCPA01001817             686 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 199940tic ultra-conserved element locus
            uce-5951, sequence.
ACCESSION   KCPA01001817
VERSION     KCPA01001817.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 686)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 686)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..686
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="199940tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>686
                     /note="ultra-conserved element locus uce-5951"
BASE COUNT          235 a          121 c          126 g          204 t
ORIGIN      
        1 ctgtcatgcc tgtgaggtta cagcacagac ctaaaagaag gtatggtgta agatcaatgt
       61 taaggaaaga gtttcattta aaagaccatc ttttcccatc agacatgata ggagatttat
      121 tattccaata ttattgttga aactagaaaa aaataaacag gaacatatat tttcatttta
      181 tgactgtgaa caacatttca tactgtaaac atatcttggt ctataacatt tacccactaa
      241 tttcaataca gtccttattg ctagctcggc agagcctctc cagaacattg tgttaatgat
      301 taatatgaag tcagtggaat tccacagttg ctgagagtct tgtgcccaag aatgaactgc
      361 attgctaaat cagcaaagac agttgtcaag gtaacctcta tgtaatctat ttaactggct
      421 cccaaaacac caatcaaggt cagataacgc actcaagcac catatgaaca cactcatacg
      481 gcataaagct ttgtatcaag acagcaggga ggaaaaaacc tcattaggaa gcaaaaaaaa
      541 taaattcagt tttgagaagt gttaattggg attgcagtta gctttgtggg gaaagcatgc
      601 tgctcatctg aatatgtttt atctatagta gaagtaattt cactccagtt cagtttgaat
      661 ggtaatatcc ttctactagt gttgga
//
LOCUS       KCPA01001818             630 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 200038tic ultra-conserved element locus
            uce-4787, sequence.
ACCESSION   KCPA01001818
VERSION     KCPA01001818.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 630)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 630)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..630
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="200038tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>630
                     /note="ultra-conserved element locus uce-4787"
BASE COUNT          151 a          152 c          190 g          137 t
ORIGIN      
        1 agggagcagg gcccacagtg cttcctttct gtttggcttg ttggctggat cgctccaggc
       61 tggctctgct caggtctagt catgctgagg aggtggtgaa aacaccaagt gtggctgcag
      121 gcaagtccct gcccaggtca cgatgctgcg ccgcagccag cgagcaggtg gaaggtgcca
      181 actccatgct gcctctggtt accttcttgg tgcactgtct aacagtattg attaactccg
      241 aaatgaccat gtccacgcat ttcaggcaag gttctttaat cttcttcacc tgctttttca
      301 caatggtctc aaaggccatg tcaggtgtga agagaccggt tctaaacacc cagggtgggg
      361 acaagacaag gcaggaaggg gagaaggggc aaggagaatg tcacagcgtt acacacacat
      421 ctcggagcag gcaccgccat caccaaaacc tgggacattt gggctgggca agccctgact
      481 gaagttaatg aaaaacgagg atgcttggca cttgcaagga aggaggtgct gagggcaaat
      541 ggatcttagc tggacggcca tagccaggtc accattccat ctcaagggtg gcaggggctg
      601 agtatttgac ctcgagttgg gcaggagatg
//
LOCUS       KCPA01001819             510 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 200143tic ultra-conserved element locus
            uce-6538, sequence.
ACCESSION   KCPA01001819
VERSION     KCPA01001819.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 510)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 510)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="200143tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>510
                     /note="ultra-conserved element locus uce-6538"
BASE COUNT          181 a           90 c           93 g          146 t
ORIGIN      
        1 cctaccctag ctcaagtcac ttaggaagcc tttatgtaga ttttacactt aattaacatg
       61 acctcatcag acttggtatt ttctggaatt tgcacgaact gtatgtctta agaatgtctg
      121 cagacaaagt cgtaaggatt gctttggtga gaaagaggaa gaaaaatatt gtatacagca
      181 aagaaaaact tgcattagaa gatggattta gagggttaag aagtcacaga actttgacaa
      241 agcacaactt tactaataca aataagaacc ctgagctgca tttgaattca catcacacca
      301 cacctggtaa gaattagtct agcacagcat catcaatcat agtgtggttg tcagttttga
      361 catcctttaa gtctacgttg tatgcttaat gactacatta cagaaaatgt aaacagacac
      421 caaacataca ggtatgccct atattaaagt tgctgtacag caccaacagt gttttatgta
      481 gagagtgaat taataaaaca agctgttata
//
LOCUS       KCPA01001820             552 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 200253tic ultra-conserved element locus
            uce-7706, sequence.
ACCESSION   KCPA01001820
VERSION     KCPA01001820.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 552)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 552)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="200253tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>552
                     /note="ultra-conserved element locus uce-7706"
BASE COUNT          154 a           92 c          110 g          196 t
ORIGIN      
        1 ttaggtgttt ggtaatcagc acagaattag cctaaaattg gattaagatt tattgtattt
       61 ctaaaattta tggtgaatct tctgtgcctg atttaaaagt gaatgtggta ttttctttct
      121 cagttgaagc attatttttc tatattgctt ttctcttaga aatcaattct aaaagtgctg
      181 tggctataaa attgaaatgc acaaggaatc taatgtgtac atatctttat gcttttgaat
      241 agaagtgggg tcctctctcc tgagacatcc atctcctgaa ctttctcggt taatctccgc
      301 ccacagctct ctttccaaag gagagagaaa tttccagtgg ccagtattgg catttgtaat
      361 ccagcatcat gatctggaag gacttgaaat agcaatgaaa caagccttac ggaaatctgc
      421 ttgccgagtc tttgccatgg aggtattcat gtactgatgg ctctaaggag gtcgtaaatt
      481 ctgtcttgga attttttaag attatgctat gttttgtcat tttattagct acagagcagt
      541 aaaaaccgtt gg
//
LOCUS       KCPA01001821             583 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 200362tic ultra-conserved element locus
            uce-3657, sequence.
ACCESSION   KCPA01001821
VERSION     KCPA01001821.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 583)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 583)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..583
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="200362tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>583
                     /note="ultra-conserved element locus uce-3657"
BASE COUNT          176 a          109 c          112 g          186 t
ORIGIN      
        1 cagttaagtc attaaggtcc acattgaagt caatgagaat tagacacaaa tgtgttctta
       61 aaagacataa acacttcagt tctacaatga gagctggtac accaaataca ctgtaacaac
      121 tttcctgcca cacaaacttg aatcaaacac cttgatactg gccatgaact caatattcct
      181 attgtatttc atgattagga gagacaatac ctctgtctga agtatggcag ctctctgttc
      241 tttggcagta agggactctt taagcacttc aatgtgttgc ttgcaatctg aattctgatt
      301 gctaagggtt tcaagcttag tttgtaaggc aagaagttct gattctttct ttgagagttc
      361 ttgtttcagt tgatcaatct gcagtaggtc attaattttg tctccaattc atagctccac
      421 tggaaatctg aaaggtgtga atgaccatgg tacgacaaat cagacacctg tgaattctgg
      481 aagagacttc aattgtgttt gttgcaattt aatgcagaat gaatgccctg tttctgcaga
      541 agttaaaagg aaactcctac gtgatgattt ggcctataaa ttc
//
LOCUS       KCPA01001822             644 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 200470tic ultra-conserved element locus
            uce-1169, sequence.
ACCESSION   KCPA01001822
VERSION     KCPA01001822.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 644)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 644)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..644
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="200470tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>644
                     /note="ultra-conserved element locus uce-1169"
BASE COUNT          197 a          125 c          109 g          213 t
ORIGIN      
        1 taagatgtta ccaccagtga tattattttg aagataatct gtgatacacc taagagtgaa
       61 tttacttatc attaaaaagg ttcttttgtt tttttcctgt taaaaaatat ttctgttaat
      121 gtgcaacttg ggaaaatagc aagctcgtgt ggtttgaatt tttttttaaa ctgtgaaaag
      181 tctgagcatt aactgatcta gactgggctg ggtactcact ctgtcgcaca gctcttcaaa
      241 cgtgaagtct gcaacggttc cacacgcttt attcagcctc agctctctgc cttgcacttt
      301 tagaatcctt ggtctagtta ctatgggaac atgaacaaag actcaatctt ctctggataa
      361 ttactataaa attcatctct tacagatagg aaatgcatag cttcatgaat aatagcacat
      421 gattcaacac ataaattaga caaaatgctg atacaatgac tgccacttga gtgtggcatc
      481 aacccatata cagcaatgga acttattaat tggtcagtgg agattgggca ttgtgttcta
      541 aatgtattct ctttcaagag aaattaactt acgtacaatc attttgtttc tgagccagct
      601 catcaaacaa cttatccatg acagcctcca catcagcttc actt
//
LOCUS       KCPA01001823             515 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 200580tic ultra-conserved element locus
            uce-5295, sequence.
ACCESSION   KCPA01001823
VERSION     KCPA01001823.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 515)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 515)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="200580tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>515
                     /note="ultra-conserved element locus uce-5295"
BASE COUNT          167 a           75 c          105 g          168 t
ORIGIN      
        1 tttttaagca gaagtattag ctgtctgcaa ttcaaagtga ggggttgagg gccttcccat
       61 tttgttttta agaaggtcat agtgaaagct tgtgattgaa tattttgcat ggaactgcct
      121 atgacaaaga gaaagacggg gtttgtcaga gtactatgaa aagagagaaa gatctgtgtt
      181 agatttttaa ggtatatttg aaagaatgaa ataaaaaaat gctttcaaat cctcagggac
      241 tttgcaattt atcaagaaag acacattctt cctaatgaaa ggttactgac cttcatgaat
      301 gtgacagttc aattacagtc cattcatatg cagagcagtc gttgataaag gatttaggaa
      361 atgtgactag catagcgaat gtctagaaaa ttattattgt ggagatataa ataagattca
      421 gtcaggtagt agaacctttt cttctctggc ccagcaaccc attagatttg cttcagtgaa
      481 tacattgact ttttcctctt ctttttctac taata
//
LOCUS       KCPA01001824             442 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 200685tic ultra-conserved element locus
            uce-6986, sequence.
ACCESSION   KCPA01001824
VERSION     KCPA01001824.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 442)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 442)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..442
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="200685tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>442
                     /note="ultra-conserved element locus uce-6986"
BASE COUNT          138 a           80 c           69 g          155 t
ORIGIN      
        1 gtggttggag aaaccaaaaa accttagatc aatgatcaaa ctttcgtagt agatggcttt
       61 tatttttaca aaatatttgc ttccagcaga gtatatctta atttacgaat gcagaaatct
      121 gtcattaagc tttgacccag cttcatggca ttgtcaaatg caataacgta tcttttaata
      181 gttttatatc aagtaaggac ataacatatc attagtttaa atgtatttgc aagcaattac
      241 ccccaccagg atatttgtga atgctcatgc aaaattgatg aaattctgac atgcttaaac
      301 attgttcatt tagctctatt ccttatgtat agaaaaaata gaataaataa ttctgctgcc
      361 acttgcaaac tactgctcgg cattttcatt ctgttcgtgg cttctgtcct gcctttaaac
      421 tatagccctt ggtgatcatt tg
//
LOCUS       KCPA01001825             659 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 200792tic ultra-conserved element locus
            uce-3746, sequence.
ACCESSION   KCPA01001825
VERSION     KCPA01001825.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 659)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 659)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..659
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="200792tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>659
                     /note="ultra-conserved element locus uce-3746"
BASE COUNT          201 a          116 c          119 g          223 t
ORIGIN      
        1 taggttctat ccttaggggc tgatgttcta ccagaatata aactccagac acctcgcatc
       61 aacaagttta ctatattgca ctatagtcct ttcaaagccg tctgggactg gctcattttg
      121 ttgctggtca tatacaccgc catattcacc ccttattctg ctgccttcct tctgaatgac
      181 agtgaggatc ggaagaggag agagtgtgga tattcctgca gcccactgaa tgttgtagat
      241 ttaattgtgg atattatgtt tatcattgac attctaataa acttcagaac aacgtatgta
      301 aaccagaatg aagaagtggt aagtgatcca gcaaaaatag caattcacta cttcaaaggc
      361 tggttcctaa ttgacatggt tgctgcaata ccttttgacc tgctgatttt tggctctggc
      421 tctgaagagg taagcttaag tgaataagaa atcttaattg tcatttaata ggctgcttag
      481 tatttccatc ccatcattta aactaaaatt aaatcttaga ataatgtaaa atattagctt
      541 ttattgacaa gagacaacac tgaatgattc ttctagtatt tttcatttat accatatttg
      601 gtactgtctt tagaaataat aaatatattg catataggac ttggtggttt tatataaga
//
LOCUS       KCPA01001826             414 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 200887tic ultra-conserved element locus
            uce-5578, sequence.
ACCESSION   KCPA01001826
VERSION     KCPA01001826.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 414)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 414)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="200887tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>414
                     /note="ultra-conserved element locus uce-5578"
BASE COUNT          136 a           71 c           70 g          137 t
ORIGIN      
        1 tgtacacgca gttgtatgca tcaaagacgg tgttttaaaa taatttacta ctgatgtatc
       61 tgctgcaaaa ttaatttaat atggatttac aatgtgctct gtctcttgac caacataagc
      121 aatttcagtt tgacatcaat tagtgagtag cttttactct tatagacata tttataatgg
      181 aaaggagtgc atttaggctt taaggtcctg ccaactaatc aatttgatga actaattgat
      241 aataaatgtt aattgacaac taacagcagt caattaattg catttcaaat gcagctccag
      301 gaagctgagt tgaacattat tctacctcaa gctactcaaa taatagctca gcaatgactt
      361 tgcaacaggc ttcaaaggtc aacgtgggct actttcctat ttgtcataag atgt
//
LOCUS       KCPA01001827             539 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 201098tic ultra-conserved element locus
            uce-4570, sequence.
ACCESSION   KCPA01001827
VERSION     KCPA01001827.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 539)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 539)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="201098tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>539
                     /note="ultra-conserved element locus uce-4570"
BASE COUNT          132 a          111 c          133 g          163 t
ORIGIN      
        1 agcactccta tttatctcac catttcctat gagaggcggc aaggttgggg ctttggaagg
       61 tggaatgggg ttcagtcttg gaagcattcc attaacttgt ttcaaccttt ctaatttcac
      121 ttgctccatc catttggtcc ctgtcatatt cctcctggcc tgtaagccaa gtgctgtggt
      181 ggctgtggaa atggtagagt ccatgactgg ggtttcatcg atgacactga ggtctcctac
      241 gctaccacca ccggtcagag taagctcgat cccattgttg gaatagttgc tgatggggga
      301 ctgttcgttg ctgcatgtag actgaccacc agggcttggc tgagatgtct gttggaggga
      361 agtaaggtga ggattaagca tgttaaccag agtgctaaat gaaggtgtag aaaagtttag
      421 ccttaaatga taacagtgat caggtttcta ctgcaaaaat cccctttcac atgttgctga
      481 tggtatacaa tatatctcca taagacatat ctgagttatt cccagagtta cttctatca
//
LOCUS       KCPA01001828             484 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 201205tic ultra-conserved element locus
            uce-3504, sequence.
ACCESSION   KCPA01001828
VERSION     KCPA01001828.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 484)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 484)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..484
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="201205tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>484
                     /note="ultra-conserved element locus uce-3504"
BASE COUNT          183 a           76 c           72 g          153 t
ORIGIN      
        1 acaaccccac agtaagtgta tcttaataac acaataaagt gctagctctg attagaaaag
       61 aaagatgaat tcttctgcta aaccagggta accctaaaag cgtgttaaca tgaaatacta
      121 aataaaatgc tactcatcta taataaatct tattacacat tttggcaatt ttactactaa
      181 cataccgaag gtttcaagca atgtttgaaa atagaaatct taaattgaat cattgttgca
      241 tgaatatatg caaaatattc atttctagca ctgtgagggt tgagtgcttt taaattggag
      301 aaatcactca tgacttcacc ttttcatgca agataaagtt gtatgtggta acatcattac
      361 aatgtcatga aagaagtgga aatcatacaa cagttctgcc taaagctaat atacaaaaaa
      421 gtacttctat atttttcaat attgtccaat atttaaaggt gcagtacgag gctttaaata
      481 tatt
//
LOCUS       KCPA01001829             415 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 201310tic ultra-conserved element locus
            uce-2243, sequence.
ACCESSION   KCPA01001829
VERSION     KCPA01001829.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 415)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 415)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..415
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="201310tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>415
                     /note="ultra-conserved element locus uce-2243"
BASE COUNT          127 a           84 c           77 g          127 t
ORIGIN      
        1 caaatactaa atcccagcat taattttaag attaaaaata gcctttctgc tacccgagca
       61 cctatgtaac actgcttctg tcctttaaaa aacagtttta tgaaggagca gttgagccaa
      121 aattgaaaaa agggggcatg tagcctttca ggctacgatg attagtatta agatgagttg
      181 cactttagct aggctgaaac ttgttcgtaa cagaatgtta aatacttact gaaaagaaag
      241 attatgtcta tctagttaca ccattccttg atatatgcac catgtcagag tgccattgtc
      301 tcctgggtaa agactgagag ttcaaatacc cactatctct cccctggtgc tccaaatgct
      361 ctgctttgaa gtttttataa tccatctgtc atcttctagc agggagggca catgt
//
LOCUS       KCPA01001830             793 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 201530tic ultra-conserved element locus
            uce-8009, sequence.
ACCESSION   KCPA01001830
VERSION     KCPA01001830.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 793)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 793)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..793
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="201530tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>793
                     /note="ultra-conserved element locus uce-8009"
BASE COUNT          235 a          177 c          159 g          222 t
ORIGIN      
        1 gttaaacaca aagatctgga agaggcagtg ctgtcctgtc acagagctgc ccttttgcct
       61 cacacatcca catgctcaca tagcctgcat tcctccccca ttaagctttg acctgaacta
      121 gacatagagc taaatatgtg tgcacctgtc cccttataat gacctgctat tatcattttc
      181 cacccctctt ttttgattga tggatattat atgcagagtg accctcagaa tctttttgtt
      241 aggccttgct aaagcaacct gcaaattaat ttaatatcct cttctggttg ggagctatga
      301 aacgagggct cgaggctgat gatgcgtaaa ccatttgtgg catgtattta atctctggac
      361 aatggataga gatgttagtg catgctacac taagttctat ttacgctggc tattaagtgc
      421 agtcaagctg aaggcaatcg gagcacatta cagggcctaa tgggagagga tgctacacaa
      481 cagtacatta aagactgaaa atgaattaag aaggaagcat ggtagagaaa gcagacaagg
      541 aaagggttct gtatacagat aactcttatt gacagcacaa atattcatgt actcccaaat
      601 ccaattttgg tattggatac cactctagag ggaatgtttt gaattccatt ttcatgcaga
      661 tacaaaacga ctcgaagcca gtctgcccct cccacatcca cctcagtggt ttgcataacc
      721 tgatgctggg aaatgccttg caaagctaag ccagatccct cttgaccatt taaatcaagc
      781 taaactttct cag
//
LOCUS       KCPA01001831             723 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 201640tic ultra-conserved element locus
            uce-390, sequence.
ACCESSION   KCPA01001831
VERSION     KCPA01001831.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 723)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 723)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..723
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="201640tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>723
                     /note="ultra-conserved element locus uce-390"
BASE COUNT          224 a          155 c          130 g          214 t
ORIGIN      
        1 aagtagaaag ctggaataac caaagggtta aagatacagt ttacacttgg gaattctcta
       61 taatatgctc ctccttccct agcagaaaaa tcatctgaca ggaaacataa gattaagttt
      121 gtcccaccta agtgaacaaa gagatctcag aacaggcaac cagttcactg cagagcaaga
      181 actaatcctg ctggaatctg caatgctgct cagaaattat tattgaagtt aacatcttgc
      241 ttctagatct acactgcagt tcttgtcact tctcccataa agtttaactt aaagctccaa
      301 acataatcat gtggaaaatg gacattattg attcctatgg tccattgttc ccccattcta
      361 agtccctgaa gttcaagttc aatctggaat tacatcatgt ctggtttctc ctggttacca
      421 gacagcttga gacgtgacca cagctacaga aaaaacaaac agccttcttc acgcttcggc
      481 tcccctatcg attcaaacat aaactttttt ctttctctca aatatgcttc aagtatggag
      541 catggttaat ttagagatta agttccaaat tagattatct aatggcatct taatggattg
      601 ctgacccatt tcctgtggga gggcagcatg caagtctggc ttgaatacaa ctaatttctt
      661 aggaagtgtt gaagacgttt ccctggatgg gaaggaaaca atgttctgca caactttctg
      721 cat
//
LOCUS       KCPA01001832             572 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 201751tic ultra-conserved element locus
            uce-3178, sequence.
ACCESSION   KCPA01001832
VERSION     KCPA01001832.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 572)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 572)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..572
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="201751tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>572
                     /note="ultra-conserved element locus uce-3178"
BASE COUNT          174 a          162 c           91 g          145 t
ORIGIN      
        1 atccaccttt tgtcttctga tctctctgct aagatccttc tgtatgaata gaaccgcttt
       61 caagagcacc acccctcccg cccccagcat ttcctgtcct ctcaccttaa aatgagaact
      121 tttcgaccaa agcagccatg tggagccaga attgtttcag atttatccag gcctttgctc
      181 acatcctgtc gggtgttaaa aatccctcag ctgcattgct aggaccaccc tgctagttct
      241 gaaccacatc tgacaaaatg atactgttca cttccagaac ccatcacaca gttattcttg
      301 gataaaaggt aaagcaaata gcagccaact gctcgctgct gcagaaacga agaccatcta
      361 gccatttatc aaagcttcag acaaccagct tgctttgagc tcagccacct ctcccattac
      421 agccttaaac gataacacgc cataatatca gaaatgacaa atggaaccag gggcccaacc
      481 tatacacaat caatacctgc tctgaaataa gaaccatctt taaagtattg acaaaggcag
      541 cagcaatacg gataaaactg caatttttcc tt
//
LOCUS       KCPA01001833             347 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 201856tic ultra-conserved element locus
            uce-5861, sequence.
ACCESSION   KCPA01001833
VERSION     KCPA01001833.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 347)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 347)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="201856tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>347
                     /note="ultra-conserved element locus uce-5861"
BASE COUNT           98 a           74 c           98 g           77 t
ORIGIN      
        1 ccgagtgcct ttctcccagg aatcctcttc ctcctttcaa aataacagcg ttagcagaag
       61 aaaatcccag attaggctaa caggtaggag cgtggtgcag ccctgggaga tgctgttgga
      121 agtggggaga ttgggagaat catcccagcg ggagactaat actcatcatt cggagctgca
      181 gctgaggccc tcttgagtga caggcagccg ggagctgaaa gagccgctca tatcccacaa
      241 ctgctggcat gcagacttga aagagattta tttcaggata attagctggg agtattaaag
      301 gtggcaggaa agatctgcaa ttactgttta gcaaacagaa tggaggc
//
LOCUS       KCPA01001834             516 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 201964tic ultra-conserved element locus
            uce-6769, sequence.
ACCESSION   KCPA01001834
VERSION     KCPA01001834.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 516)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 516)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="201964tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>516
                     /note="ultra-conserved element locus uce-6769"
BASE COUNT          160 a           94 c           91 g          171 t
ORIGIN      
        1 gaaaagagaa ttttgaattc tatgagttgg caaaattgtt gccactgcct gcagccatta
       61 ccagccagct tgacaaggca tccatcatcc gacttacaat tagctatctg aaaatgaggg
      121 actttgctaa tcaaggtgat cctccatgga acttgaggat ggaaggacct ccacctaaca
      181 catcagtaaa aggtatgtgt tgtgtactat agaatatggc agcctttaat aacctctaaa
      241 ttgaaatttt taccttcatc ctttcttctt tccctgcata tcaaatcctt taaagggatt
      301 caaatgtgga aatctgaggt ctgcatgaga aagacaccat gtgaaggtga aataaacctc
      361 ttattttaat taaacaacaa acctgttaaa tcttctggta aattgtttcg agttatttac
      421 ctattattgt ggtattttat atatgtttga gaggtgattt gagaactcaa tctcttaatt
      481 ttctggctat accttaagga atcacatttt tctgaa
//
LOCUS       KCPA01001835             667 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 202076tic ultra-conserved element locus
            uce-2063, sequence.
ACCESSION   KCPA01001835
VERSION     KCPA01001835.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 667)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 667)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..667
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="202076tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>667
                     /note="ultra-conserved element locus uce-2063"
BASE COUNT          207 a          141 c          116 g          203 t
ORIGIN      
        1 ctcaacacaa tttaccttgg caaaatgaca gaacctattt ctgctggcta aaaaaagcct
       61 ttaatgcatt tattaatttc accaaacata cttgaaaagt tgttttccat agcggtattc
      121 attattcctt tttgtgtttc aggcttactc ttatttattt tttccatttt gtttttacac
      181 caaggagact gcagtcaaat aacactcagc aactcatttc ctctctttgg actgaaaaat
      241 taaacagata ctaaattatg acagtgaatt tagaaaggag ggctccaagg actcgaaaga
      301 acatgtctga gataatatga tgcttctaag aatattgcaa tcacatccaa gcaatcaccg
      361 aagcgtgcca tgtaactacc tcctcagcta atatgctttt ttctccgtga tgactaatca
      421 tgttctatta aacagcagta atgctggaag aactcaacta tacaagtgta atgaagccag
      481 tattctcccc ggacagatta gctacaactg atttgacaca taccatcata ggagcttcaa
      541 acctgacaaa ctctgtgctt gcttctgatt tatgccgtca agctcttcag gagaagagaa
      601 tggaaatcca ggcgtcgccg cgtggtagag gtgaaatgtt ctgatgtgct tcactgtaaa
      661 gtcaccg
//
LOCUS       KCPA01001836             561 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 202185tic ultra-conserved element locus
            uce-4842, sequence.
ACCESSION   KCPA01001836
VERSION     KCPA01001836.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 561)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 561)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="202185tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>561
                     /note="ultra-conserved element locus uce-4842"
BASE COUNT          176 a           97 c          126 g          162 t
ORIGIN      
        1 gtgccagcag cgcacagggc agcagctgat ttagccactt gaccagagat gtaatcggga
       61 gggggaagag ctgaggatcc ttttgaggcc gccacctggg actggcggca cttctactaa
      121 tgcacagtga acagctaaat catacattat tgatttgtca gacgtatttg catataaata
      181 agcatgatca ttcatacaaa ccttaatgtt gttgttctcc ctttagtgtt gtgatcacag
      241 atgaatgact ctagttagac acaattcagg aaagcttgta ccactgcagc aaagtaagct
      301 gctgatttaa aactacattt attggagcat gtaagtgtga cagtctattg gtgaatttgg
      361 ggataattag tctaaaagac aagataaatg aatcctggaa gtggtattgt gatgaagaaa
      421 tgatccctcc atgctagtaa agctttgatg ccagaaatat tgtaaatgat aattaactgg
      481 gaaacacaga ggaattatat ttcaattgtg ttttcaaaag gacttagaat tttacaggca
      541 aattgattcg gttctccccc t
//
LOCUS       KCPA01001837             717 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 202299tic ultra-conserved element locus
            uce-759, sequence.
ACCESSION   KCPA01001837
VERSION     KCPA01001837.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 717)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 717)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..717
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="202299tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>717
                     /note="ultra-conserved element locus uce-759"
BASE COUNT          217 a          125 c          153 g          222 t
ORIGIN      
        1 attgcagctc gtaagaagcg gaatttcatt ttggatcagg tagaagcttc agtgaaaaac
       61 ggttttatag gctgttaatt aattgggatg cagttgtttc agttacactt actactcatt
      121 taggggacac tacaaatgct tgtctgaact tctaggttta tgggatgttt ttaacacgtt
      181 aactttgcat tatgcagcat ctttatgtcc agttatttgt aaccttcatt gcaagctctt
      241 gtagaggtga agtctataca ccataagttg acttccttaa ctcttacaat gacagctacg
      301 tgtagtaagt tactgcattt ttttcagaca aatgtgtctg cagctgcgca gaggagaaaa
      361 atgtgcctgt ttgcaggctt ccagcgcaaa gcagttgttg tttgcccaaa agatgaagac
      421 tacaagcaaa gaacacaaaa gaaggcagag gtggagggaa aagatcttcc agagcatgca
      481 gttctcaaaa tgaaaggcat ggaacataat cctatactgt gttttaggat gctgagtatc
      541 tgtttaaagg attaagtaaa cgtgaagtct aaaaaatcac tttatcttat acaaaactgg
      601 aagactattg taacttggta ggataacact atattgtgtt ccctctgctg cagtccttaa
      661 cactactcag ttatggtgat acgcttcatg cagatgcaca aagctgtctt ggcatat
//
LOCUS       KCPA01001838             738 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 202408tic ultra-conserved element locus
            uce-7727, sequence.
ACCESSION   KCPA01001838
VERSION     KCPA01001838.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 738)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 738)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..738
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="202408tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>738
                     /note="ultra-conserved element locus uce-7727"
BASE COUNT          229 a          140 c          159 g          210 t
ORIGIN      
        1 tttccttgct gttcttctga acaaagctga ttgtcaggag tggctgagtc tctgccatct
       61 tcaaaagtgc ataagaaact tgcactatca gagaaccgta attgccatct cagacttcct
      121 gtttaggatt cagtcaagta gatattgttt atggatcata aaaccttact actgtgagga
      181 ttctcaaata cgagtttcaa ctttcatggt gcagtaaatt agaaaaaaag tgtgataata
      241 ctcctcggag aacagtaaaa tagagctctg caatggttaa atggaatttt ataagcacat
      301 tcagtgtgga actgttttgc attacatgag ttgaatacct tagagatgac acacatctgc
      361 aggcacttta ttaaatcctt agtcagcact tttccacctg atgagattac ttcttcattt
      421 gactggagaa agggaagcaa agatctcgta ctggactgca gaattctttc tgatgtttca
      481 ccttgagtgc tggagaagga cagcgagatg ctcggcagga caatacagac tcgtagtggc
      541 accgacaact gtgtggcagc aattttactg agcaggacct ttagttccag ctctaaactc
      601 gctgggatgc aaagtaaata gaagagaaat aaaacactgg ctcttttatg gaaaggcacg
      661 gagataatcc tgaccgtact gtgatagggc ccatgattta aatggagatt ttaaattaag
      721 aaaggcaaca ccaccttc
//
LOCUS       KCPA01001839             679 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 202518tic ultra-conserved element locus
            uce-7876, sequence.
ACCESSION   KCPA01001839
VERSION     KCPA01001839.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 679)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 679)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..679
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="202518tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>679
                     /note="ultra-conserved element locus uce-7876"
BASE COUNT          215 a          159 c          173 g          132 t
ORIGIN      
        1 aaaagaattt gcaagtattc tgaatcagtc aggatttagc ccatgctgca gatccacttt
       61 agaattgaga aagccctgga tcaccctttg tttaaacact gctcacaatg ttcaaaaaca
      121 tccaataaat gaaactcaaa acaaaaagcc acgtagaaca aaaccagaac agaaagcccc
      181 gcagtggtga gaagcacatg ccaagtgctg gctgatgcac acgatggcaa atgttaagat
      241 ggtgtgaagc ggattcatgc agttagcgct tgttcacctg actgcccaac agaatcagca
      301 gtggagagag cactagtgga cctggaatga cgtcgagaag ctgcaagtag aaggaatggc
      361 aacacccaca ggattaacac acattgaacc cgagacagaa aataatccaa aggggatgcg
      421 tgtgaccgct accggcagag gtgtttcata gtgacgggga atggcgctgt atgcgaatgc
      481 ggaacaggta cagtgcaagc cccacagcga cgcctccgcc tgtagctttt cccctcgtga
      541 cataaaactc atttggaaca gtcccaaacc gggtgcagct cggcaaaaat cacgttccag
      601 acctgcgggt ctggcaggcg gccgtcagga gaacgtggag tacacactac agagaagggt
      661 ttagatgtgt ctgatctaa
//
LOCUS       KCPA01001840             243 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 202621tic ultra-conserved element locus
            uce-4398, sequence.
ACCESSION   KCPA01001840
VERSION     KCPA01001840.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 243)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 243)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="202621tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>243
                     /note="ultra-conserved element locus uce-4398"
BASE COUNT           84 a           48 c           59 g           52 t
ORIGIN      
        1 ggaaaaaaaa tagcaacgta gagtctagac agaagagatt gggttgaaat ctggaagcta
       61 ttcagtgagg ctacggcaca tggcagcttg actgcagaaa gagatcacat tacgctgcct
      121 aattgcacat gaaaaatgta cacatcactt ttcttaaatg cttggaaaaa tagatgttca
      181 gatggcaact gcgagccagc aactgagcca gttgtacata gctggaacgc cccacgaatg
      241 gca
//
LOCUS       KCPA01001841             641 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 202729tic ultra-conserved element locus
            uce-4680, sequence.
ACCESSION   KCPA01001841
VERSION     KCPA01001841.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 641)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 641)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..641
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="202729tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>641
                     /note="ultra-conserved element locus uce-4680"
BASE COUNT          185 a          130 c          137 g          189 t
ORIGIN      
        1 attatcagtc tattgaaaat ggagaatcaa tgtaagggta aatatttgga tggtcagatc
       61 catggtttca ttttgttgct atgcatttct gttctgtttg cagctggtat ttgtacattt
      121 gttaggaaat gctggggaat ctctcaattt tgcataaaat gataatagta acttgcttcc
      181 tccttcttcc cattagagca tactactgaa attatttaaa ttgactgagc cttttaagca
      241 agtaaacaca ttttaactag cccaatcctt ccattcatgc ctactataga aattagcctt
      301 cactcttcct tcacttacac atggatacac acacttgcat ggacacaaga aaaatttctt
      361 ttctcctgtc agcattccta cccaacaata gttagattag tggaaatgag ggcctccgca
      421 gagaaaggac attcagccac agaaggctcc ctgcaggaac agctggtagg ggttaatggc
      481 tgctgaacct cacagccagg gcctattctc tattgtgtgt tcaactcctg ggaaggaggg
      541 agacttgtga cagcttctgg ggtgcacggg atcagaggta cagcagctag gtcacagagg
      601 tagtgttcaa aaggctagcc gggaattgca ataaaaatga a
//
LOCUS       KCPA01001842             489 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 202836tic ultra-conserved element locus
            uce-4161, sequence.
ACCESSION   KCPA01001842
VERSION     KCPA01001842.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 489)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 489)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="202836tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>489
                     /note="ultra-conserved element locus uce-4161"
BASE COUNT          172 a           86 c           78 g          153 t
ORIGIN      
        1 tactgactca ataaaactgt ctttttctga ttattacacc actaaaatat tgctgaaata
       61 catacttaat tttatttaca gtgaaggaaa tcattcactt ggatgtgaaa gagttaataa
      121 ggaagaaaat cacacacagt gcgtgttaaa ggttagagga ataatcagtc atttgaaaaa
      181 cactacataa acatttttcc ggatgcaatt ttcggtccaa ggatacattt cccagtagaa
      241 atcagcagct aaaaaggaaa tcatttagtc tccataagtg ccaaattgta tcctgatttt
      301 tcctggtctg gctcaacttt caaaactagt ggttcaactt ctgcaatctt tcacccaatg
      361 actatataaa cacatcctta taagacagac ataatccttg ggtgggccaa tttatgttgg
      421 attatgaaaa tacttaaagt acagaatcgt ataatgactg ttgtcctttg gtttccacta
      481 aaaggaaaa
//
LOCUS       KCPA01001843             707 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 202947tic ultra-conserved element locus
            uce-4766, sequence.
ACCESSION   KCPA01001843
VERSION     KCPA01001843.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 707)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 707)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..707
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="202947tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>707
                     /note="ultra-conserved element locus uce-4766"
BASE COUNT          197 a          147 c          122 g          241 t
ORIGIN      
        1 aaattgtcat tagtaaagga aggttttatt aattcacctt tatataaaga atcactaaaa
       61 ttcttataga tacagaccac gattatttct gcttcttgcc ttgcaaacat cttgtttcaa
      121 attaggttta tctgctgtct aaaactaaat acaatgaata gatgtataat aaaatctttt
      181 aattgtctta gcatatgttg cttttattag gtgagaataa ttgcattcat gggatcacct
      241 acaaagtcct ttagaatata aaattgaaat ggcttcacac tgagtgcaca agtccttctg
      301 agccgtgcca ttttcccctt cactgcctct tgtccccctt tcgctgtaaa gttcacattg
      361 aagtgtgaca agagacactt gacaactgac acatgctgga tcttatcagc agtgagtgca
      421 gtcatgggcc ctgactgaag agcgattgtc atttctacac catttattcc tctcctagcc
      481 tcattgcttg cttcctttct gaggaaattt tccctgttaa agtactgtac ttgtcgttct
      541 tttttggtgc gtgtctgtgg ggacgaaagg attttgttat gcattcatcc cataggcaag
      601 cctctaacag acttctaacc tcttagtgtc aggactgctc taagctgatt caggctaata
      661 aaagcaaccc aacaaagctt tgatggtgtc attacatctt ccttaaa
//
LOCUS       KCPA01001844             426 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 203056tic ultra-conserved element locus
            uce-1869, sequence.
ACCESSION   KCPA01001844
VERSION     KCPA01001844.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 426)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 426)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="203056tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>426
                     /note="ultra-conserved element locus uce-1869"
BASE COUNT          126 a           73 c           67 g          160 t
ORIGIN      
        1 tacttttctg tctgtaatct gcagtaagat tctagatttc aggaaaaatg ctgcagaaat
       61 ctatttctta tttaattttt actgttcttt caaatagcag tttgcagtat gcatctgggt
      121 gtacagctaa tgacccatga gcaataagca actgtttaag taaaatgcac taggaaaaag
      181 cttttaccaa acagcatttt aatattttaa atagattttc cattgcaggc tctttgtaac
      241 tggattagtt ctctgatgtg ttctgacaga gctgttgtta gggatactcc attaactttg
      301 tctgtcatct tattttcccc agtatgcagc ataacaccct tatatttcat aatttgtatt
      361 gctatcagtg ctgatttgta aatgtgcaaa ttataattaa caacggccac tacttctatt
      421 aaatat
//
LOCUS       KCPA01001845             390 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 203161tic ultra-conserved element locus
            uce-1451, sequence.
ACCESSION   KCPA01001845
VERSION     KCPA01001845.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 390)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 390)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="203161tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>390
                     /note="ultra-conserved element locus uce-1451"
BASE COUNT          141 a           71 c           72 g          106 t
ORIGIN      
        1 cctaccgagg gatatacaag gtagaactgc ccaaagcagc ctgacttatg aggactgcca
       61 cagcaacaca accaatgcat ccctaaacat ttagtaataa aaaatctgtt gttctttagt
      121 cgccaggatt taacaagcct aatccctagg agaggtgata aaaattcatt aatctaatta
      181 aatacttctt attgccaaag tgactttgta gaggagcttt gctgaaggat aagtgcaaag
      241 taaaatggag tcccagcaga gaaacaaacg ttagacttca gcaagctggt acacgcttca
      301 ttaaactcat aattatcctt tggttctaag tagctgataa tatttaatga gtatccaaga
      361 taatttaaag aaaatgttta ctaatgagga
//
LOCUS       KCPA01001846             579 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 203264tic ultra-conserved element locus
            uce-7700, sequence.
ACCESSION   KCPA01001846
VERSION     KCPA01001846.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 579)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 579)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="203264tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>579
                     /note="ultra-conserved element locus uce-7700"
BASE COUNT          156 a          122 c          124 g          177 t
ORIGIN      
        1 ccattgggaa cctacggggc gatgaaagaa atgttgtttg ttgtttgtgg ccttgttacg
       61 aatgtctggg tttaagaagc tcctgcttct cccacattac tgctctggac aaatcttgaa
      121 ccacctttgt ggcaaggcct aacaaacgct gtcactttga cctaatccac ttttctgcac
      181 agctgtgcta aagtcacctt tagttttatc acattttaat gcaaacaagg ccggaagggt
      241 gcttgtttgg attgaagaag ctgtgacaat tcatctgaat gggaacttca gtaactggga
      301 agaaaaatgt gacagggagc tttatcactg cattgtacac aacaatctga aaattattgc
      361 ttctttaggg gcctattctc ttcttgaggc ctagcacagt ctatgctaag cagccagaca
      421 gctctgaatg gtttgccagt cctaaagaca gattttaatt ctattgtttg tgggtatccc
      481 tgactttcct aagaggattc aaagacaggc tgcagaacaa ggcagttgac ataagacttt
      541 ggccaatctt taaaattcaa acagttttcc ctgttcctc
//
LOCUS       KCPA01001847             635 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 203373tic ultra-conserved element locus
            uce-7536, sequence.
ACCESSION   KCPA01001847
VERSION     KCPA01001847.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 635)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 635)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..635
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="203373tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>635
                     /note="ultra-conserved element locus uce-7536"
BASE COUNT          188 a          128 c          164 g          155 t
ORIGIN      
        1 aggctgggca tcataacagt aatttatgat tttactggtg tattatcatt gggtaataag
       61 agcaacttga aactgccaat tatctcataa gaggggtatc accttctatt ttgaatgact
      121 ccatcgataa atgcaggttc tgcttgctaa caatccatca cataatcagt tgatgtgagc
      181 tgagcccttg gctcggcaac agagcgaggg gagggggggg aggaatcgcc tgcagcagtc
      241 ggcaggtcac acacacagag tgtgcaacag caaactcagt ttacaaagag acatctgttc
      301 cattacttcg atgcattgtg gctaattaca tcctggccca tctgtgaaat gacagccact
      361 tattctccag tgaaccataa aatctgtaca tgttcaatgt gggcagtgaa gaggagtgca
      421 ggggagtagg gggaggatgg agaagggaga acaggagaac aaggcgaagc accaagatat
      481 ctctcattcc catctggtgt cggccaggaa agaaggaact ctggaagaaa ggccctaaca
      541 aaaaaacttg ctctaaccca aagatttttg catgtggagg ggagtgagat gttacatgag
      601 gatttctaca gtgtttctgc ctcatctcta cctgc
//
LOCUS       KCPA01001848             564 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 203473tic ultra-conserved element locus
            uce-4656, sequence.
ACCESSION   KCPA01001848
VERSION     KCPA01001848.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 564)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 564)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..564
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="203473tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>564
                     /note="ultra-conserved element locus uce-4656"
BASE COUNT          214 a           91 c          103 g          156 t
ORIGIN      
        1 attgtacact agaaaaccaa tagtcccagt caaataaaac attgaaaaaa aggctaattg
       61 aatatggagg aagacatgtt gtagttcttg ttctagtaaa caggcagtta aaactaggag
      121 gaaagtgtca attggtaaaa ttagctaaaa aagttacttt gagtttttgc cctacatttg
      181 gactatcaaa actgaggcaa acttttcaaa gcaaattgct gaggattgcc aagttaacaa
      241 gctgttctgt gctgcaaggg acatatttat ggacatactt tcaacaagac gtacctagtg
      301 ctaccaagct gtgctgtact aaagagcagt aagtatcaga taaactgatt tttaataaag
      361 gatttcacac atgaaaatga ttaaacacag ctcaaatatt cagaagtgta caaacctttc
      421 cctcctcttt tctgctacaa cagtgtctaa acaaagtaga aaacccagga aattcaaaga
      481 taagaagata cataagaatt ttattaaaag aaggcaatac aaagttaact gtgggtgagt
      541 actaggtctc cagtagtaat tctt
//
LOCUS       KCPA01001849             698 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 203586tic ultra-conserved element locus
            uce-7304, sequence.
ACCESSION   KCPA01001849
VERSION     KCPA01001849.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 698)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 698)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..698
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="203586tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>698
                     /note="ultra-conserved element locus uce-7304"
BASE COUNT          209 a          134 c          154 g          201 t
ORIGIN      
        1 gaaaggcatt tttaacacca aatgtcctat agaaacaaaa tcaaaatatt tttccagttg
       61 tcttgtctac gaaaagcctt cagtgacggt gaaggatggt tttcagcagg ttttaggcct
      121 tggggtattg gtatccaagt agttaaaact acatcagcac taatagctat gagctcatct
      181 tgtataagca catttttagt taaacaccgc aatcttggaa aaaaatgtta gtatgcttaa
      241 acagcctggc tcagaatagc tcacaatatg acgcatacca caggaaataa agtggtatga
      301 ggcacctaca aaatattttt caaacaagtc attgaagctg taagccccat gcctcagctt
      361 taggaagtca cttattaaga atcaacacca gccgtgccaa gctaagctct tgctcttggt
      421 gattttccaa ttgaatattc agagccctgt ctcggtcttg ttttcaggga agtacatgcc
      481 tggaatgtta gcaagctatt tgctggaaaa aatgcccaca acaggcccaa tgttgatcac
      541 attaatgcat ttgagtgggt atagagtgca aatgattgaa agtgcttcca gatcttggtt
      601 gccggggaca aagcaggctc tgttctctga tctgatggtc atttttttca gtggaggatg
      661 tggtgcagga agagggagcg gtgccaatct ctgtctaa
//
LOCUS       KCPA01001850             525 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 203696tic ultra-conserved element locus
            uce-5148, sequence.
ACCESSION   KCPA01001850
VERSION     KCPA01001850.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 525)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 525)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="203696tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>525
                     /note="ultra-conserved element locus uce-5148"
BASE COUNT          153 a          122 c          105 g          145 t
ORIGIN      
        1 gccgggagcg ccggagccgt cagcggatgt tgacagcctt gatgtcttgg cgggcaggat
       61 ccagcagcat ctcccactgt atggcgctag atatttaata aagtaaaacc cccaggatca
      121 agcaggctgc aatccctccc agctcctttc ttctgccttg ctcgagctct ttcaagcctg
      181 cctcagaaaa tcctttcatg cctccctcac cagactgaca ttttgacaag ttgccacgag
      241 tgacatctga tttgtacaaa tttcaagact aataaatcta cctgtcaaag cggaaacttt
      301 aaaaggagct aagcccagcg ggtatagttt aacagaactc aagttgatga aactgtagga
      361 tggagaaatt atatctgtca caatccaccc acattagttc tgtagagatg ttggcaactg
      421 aaacaaacgt ctttcacagc cttgtaaaag gagactgtta atactgtgag taacaagtaa
      481 cagttctatt tgtaaactat ttatttattt aaattttaat ttgcc
//
LOCUS       KCPA01001851             573 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 203808tic ultra-conserved element locus
            uce-884, sequence.
ACCESSION   KCPA01001851
VERSION     KCPA01001851.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 573)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 573)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="203808tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>573
                     /note="ultra-conserved element locus uce-884"
BASE COUNT          182 a          111 c          107 g          173 t
ORIGIN      
        1 aaaaaagcaa aagggaactt ttcaagcacc ctttcccagt cagtgacaat acaggtaaat
       61 gtgggggata aaatttttca gataaaattg ggcttgcttg ccttttggtt gtgcgccttc
      121 ttcctaaata caaggattct tctagtcagt caaggggcaa ctcacatgcc accatctttt
      181 attcaaaggc aggcacagat gttccttctg caggggaggt tttaatttat gaaaatgata
      241 ttgtttatgc atgaatgcac tctgcataac acacagtact tccatctgat gagagaaata
      301 ccacagaacc agtgccaatg tcaggaacat attctgcaaa tttagtcgct taaatgttta
      361 atgaatattt ggaaggcatt tccaaagcac aagaaacctt ttcaattacc ttttcactgt
      421 tgataacaaa atccaactcc tccagccaat gcgaagatct acctaggcga tctcaatatt
      481 tgctactgtg atacttcaga gttttaatgt tatgagcaat ctaatgagga aaattaggca
      541 ttttggtaag tagaggctct gttttacaaa tca
//
LOCUS       KCPA01001852             577 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 203917tic ultra-conserved element locus
            uce-6988, sequence.
ACCESSION   KCPA01001852
VERSION     KCPA01001852.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 577)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 577)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="203917tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>577
                     /note="ultra-conserved element locus uce-6988"
BASE COUNT          181 a          113 c          110 g          173 t
ORIGIN      
        1 taggattagc ttggtaaagt atctcaaaac atgagcaata gaggccaacg cattttcagt
       61 ttattccaat ttatttagct ttatttcttc ctgtaaatgt atttttaaat atactcatca
      121 gtgcaactct caaagggtaa gtgtgtatta cagaaatggt cccccagatt atattgtgaa
      181 atgtatgtga atgtgcatga cttgaaccaa tgagctgtgg cctggaatga tgtcacagaa
      241 tgtgcagcat taagtggaag gttaaaccta cttgcatctc ggttcattaa acgtggttaa
      301 agtgcaaatt ccctcattct gacagtagta atcacaaggg ttcactttct ggtcacagcg
      361 ctgactttta aaccccacag agcatctgca gaatttcagt aaaatagacc tacataaata
      421 ttctgccttg tgctgaacag aatataacga cggcaagact gcacacactc acagaagacg
      481 tccatctgac aaaagtttgc tcgcgagctt taaaacaatg ggcctatact gcctgaagta
      541 ttattgtcag atgtacattt ctatcaattg atccaga
//
LOCUS       KCPA01001853             475 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 204021tic ultra-conserved element locus
            uce-3784, sequence.
ACCESSION   KCPA01001853
VERSION     KCPA01001853.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 475)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 475)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="204021tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>475
                     /note="ultra-conserved element locus uce-3784"
BASE COUNT          120 a           99 c          118 g          138 t
ORIGIN      
        1 tttaaatcct atcttcttac gatttctcca ttcttttgag tgcttggaaa atgggaatat
       61 tttctgaagt ctttcaggac aagggggagc tctagcagtg ttctactatt tctcttcagg
      121 atgtctcgct cccaggtgaa gtaggcaatg ctgccaagat gatgctgatt gtgaacatgg
      181 tccaaggcag cttcatggca acaatagcag aaggactgac tttggctcaa gtgactggcc
      241 agtcccagca gacccttctg gatatcctca atcagggaca acttgccagc atcttcctgg
      301 accagaagtg ccaaagtaaa gttctctttt tcagatagtg gcaaaaggtc agcctgggat
      361 tatggtaaga gctgaattcc cattccttcc agggcttaag ttttggagct gggtaagtga
      421 aatagagggc aagctgttta gaaatccttt gtcagtgggt ctgctgtggc caaat
//
LOCUS       KCPA01001854             648 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 204131tic ultra-conserved element locus
            uce-5090, sequence.
ACCESSION   KCPA01001854
VERSION     KCPA01001854.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 648)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 648)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..648
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="204131tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>648
                     /note="ultra-conserved element locus uce-5090"
BASE COUNT          195 a          124 c          119 g          210 t
ORIGIN      
        1 ctggtgactt tcttgatatt ttcttgccac tttcccctgg ttttagggtg ctgctagaca
       61 gagcgcattc ggactacgat aatgcatttc atcatctgga tttggacagg ttttcctcat
      121 cgcaacactc ttcaatcagt caatttgcca atacctcaga aacaaatacc tcggacaaat
      181 ctttctctaa agacctcagt cagatactcg tcaatatcaa atcatgtaga tggcggcatt
      241 ttaggcctcg gacaccatcc ctacatgaca gtgacaatga tgaactctcc tgtaggaaat
      301 tatacagggg tttaaatcga acaggcacag cacaacctgg gacccagaca tgcagtacct
      361 ctatacaaag taaaagtagc agtggttcag cacatattgg tatgtttatt ttaacaaact
      421 tgcttctaga agttttaaat ttatgtcaga aagtccagaa tatcattagg tcatccatac
      481 ttattgtggt ctattttgat gctaatcttc acatgtattt gctacattga atttatttgc
      541 atgcttacag tagtgtactg catcggtatg taattatttt agaagtataa aaggggttta
      601 agttgacttt tctgaaatga aaaatagtaa ttgaaatgtt ggtataaa
//
LOCUS       KCPA01001855             553 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 204239tic ultra-conserved element locus
            uce-1756, sequence.
ACCESSION   KCPA01001855
VERSION     KCPA01001855.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 553)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 553)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..553
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="204239tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>553
                     /note="ultra-conserved element locus uce-1756"
BASE COUNT          168 a          121 c          107 g          157 t
ORIGIN      
        1 cttgcgcact gatagagcaa ctctaggaca aagaaatcct ttctacccaa gcttgcattc
       61 cagcacatac cagcaaagag aaaaatgaac tagataggat tttgcaagtt catgcatgca
      121 actcagtatt ttattgtggg actactgctg ctttaaggaa agatggtctc caaacggttt
      181 atgaagtgat agatcatata taaataggtt gtttgctctc agtacagatg ccatcattac
      241 taactacttt caggctcttt gagagctaaa taatttcgta atgcatcatt gaacatttag
      301 ttgcttccat agcagatggt ttcaggggtc catctgctca cagcaatgtt ttcaacaagc
      361 ccccttcacc ttcaccaaaa ggttcagaaa cattagaata ttcattcctc accacaggtg
      421 cctttcccag agcctcccca tacacaggca tagtgggtcg ctcacttgga cagacagggg
      481 tggttacaga aatatgtgac ttaatctatt gtgtgtagat tacttctgtc agcaaatgga
      541 gacagcaaca ata
//
LOCUS       KCPA01001856             451 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 204348tic ultra-conserved element locus
            uce-1453, sequence.
ACCESSION   KCPA01001856
VERSION     KCPA01001856.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 451)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 451)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="204348tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>451
                     /note="ultra-conserved element locus uce-1453"
BASE COUNT          145 a          102 c           76 g          128 t
ORIGIN      
        1 agaagccatg cttccaaaat tatgaattgt ttataaatca agctctatga cttgcacatt
       61 tatggtacca tttctgtaaa taatgaggcc catgacttgc acacaataca gctagaaacc
      121 acagcacagc tcagttttaa aatgattaac tgctgcatac agctatgact ttatttgtaa
      181 ggagcagtta ggagaggcaa aatgagtatg cagctttcca ttatatacag gcatattttc
      241 aatagccgtg tgagtctttt tatggctcca tttatgtcaa tgtcctagtg tcatctgtaa
      301 taaactggca gcaattagag ccacaataaa ccccataatg caacacaaac aacaggaagt
      361 ctcccagtac cccaacgctc taaatttaca tctccccttc gaaagtctat ttatcaccag
      421 agtttgcaag cccgtctgct aaagagcgct c
//
LOCUS       KCPA01001857             756 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 204461tic ultra-conserved element locus
            uce-127, sequence.
ACCESSION   KCPA01001857
VERSION     KCPA01001857.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 756)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 756)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..756
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="204461tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>756
                     /note="ultra-conserved element locus uce-127"
BASE COUNT          217 a          147 c          128 g          264 t
ORIGIN      
        1 aattgtatct actaacaatg cttttatgtt tgctgcacgt aagctaaaag aaaacatgct
       61 gccagtctgt aatcctgttt agtatttgtg cagaaataaa ttagaaatgg tacctggaat
      121 attttccgca gtacaaaagg caaatgtaag ttttattaag ttgaaaagga tacattctct
      181 tctcctgacc ttgatttttt agctatattc tctatacccc tgctttagaa gtattattct
      241 tcatcccatc caattaccat ttctatcagc tcttctgaaa gattatgctt tttgggtgtt
      301 cttctgtaga tgtctttcca gtggcttcac ttgatgaatg tgacaagttt tgtgttttct
      361 ccctcccctc attgaattga aaagtttttt gataaataca ggccaataag tgcccaaagg
      421 cagtgtttca atggctgcta aatctttcaa ggttaggact taacctccgt tctccctaat
      481 tcaactgcaa ccttcagtct ggagccaatc aagaatatca gatgatactt aaacaatgaa
      541 ggatttctga tattcaggta cagcctctgt tcaataggat tgcaaattct ttgtgtgaag
      601 aaagtcggtt ttgctctaaa gtactgtcac aaaaagtgaa attaccattt gcttggaatg
      661 atgccattca tcattgtcag aatactaagc attgtaagta gctaggcctc tccaaattaa
      721 tgccttgttt tgcatcggct aaatttccca aatcct
//
LOCUS       KCPA01001858             720 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 204569tic ultra-conserved element locus
            uce-1008, sequence.
ACCESSION   KCPA01001858
VERSION     KCPA01001858.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 720)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 720)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..720
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="204569tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>720
                     /note="ultra-conserved element locus uce-1008"
BASE COUNT          254 a          160 c          102 g          204 t
ORIGIN      
        1 ctcaggtgac tgacgagaag tgaactgcat ccctctaaca caatgatatc catttccatt
       61 aggcaaataa acaactacaa atcattcaga ttatgtaaat gctcaatgat atttgcctcc
      121 cggtatctca gagttgggac tgcctgaagt tttataagca tattttcatc agacaacctc
      181 ctagagcact gatacatttg attttcagtt ttttccaaag acaaatcacc gtcttagaaa
      241 caaaaaggca aataactgat tataagtgca atgaaagtct cttgaattta catatacatt
      301 tacttgtacc ctgtcacatt ttcttaacct ctaaacctcc acacaacata taaatgaact
      361 tgtctggaat tgtttttttc ccaaattgca gcctatattt tctgcagcac tgatgcaatt
      421 atgccacctc aattgcctcg cagtggaaaa aagcacaatg caaaacttag tgtatcaaga
      481 aaataaagcc cagaaaattg cctgtgacac acaccaacac aaagacacct acgcttcctc
      541 agaaagtgga cagaataaaa gtagacagtt tctattaaca ataacaagac aaaatacaga
      601 ggccctttat ctcttaaaat gtaaatttat acaaggattc atgctgccct gctgtaaata
      661 tcaaataccc cttaagacca tagaacaaga atgaattgat tttcctccta gtcttcgcca
//
LOCUS       KCPA01001859             327 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 204675tic ultra-conserved element locus
            uce-3515, sequence.
ACCESSION   KCPA01001859
VERSION     KCPA01001859.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 327)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 327)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="204675tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>327
                     /note="ultra-conserved element locus uce-3515"
BASE COUNT          106 a           78 c           56 g           87 t
ORIGIN      
        1 gcaattagac agatctcaca cctcccagcc ctctccagcc aagccaacac ccacacttag
       61 cctgcccttt ccaatttcag catgttcagt gtaccaataa tgctctgatg catttcactc
      121 ttgactgcat acagtgagat tgctaatcag gattactcga ttcagtcaac actgatttca
      181 ataaaaagac aaaaaaaatt atcataaata tagagaaagt gctggcggca gtgacaggtg
      241 attaaaatct cattcacttg gaatcagcct gattcatggt agtcgaatag aggaagtctt
      301 catatcagca gcagatgatt atcatct
//
LOCUS       KCPA01001860             666 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 204784tic ultra-conserved element locus
            uce-4648, sequence.
ACCESSION   KCPA01001860
VERSION     KCPA01001860.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 666)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 666)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="204784tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>666
                     /note="ultra-conserved element locus uce-4648"
BASE COUNT          192 a          128 c          160 g          186 t
ORIGIN      
        1 actgagctgc ctgagcagga gagggaattc actgtacaca gcaaactgtt atcccctaca
       61 atataatatc tggatttgaa gctgatattt aaagagggca cttgctttac ttatgagatt
      121 aaaggcaaat gctctcaaaa atgaagtcat gctgtgtttt gcaccttttg acacttatta
      181 actcaggtca ttaaaaagag gctaattaaa aaagaatgta aaacaaaaga gtcatttgtc
      241 tatcgctgag ctcggttctt catgtgcgct ggctggaggc actctccgtt taaaccttgg
      301 gtacagaaag cactgggagc cactggggca tgcttggagc ttgtcatggc ttttggcgag
      361 cccgtggtcc ggctcattat gcacctcata aagaagagaa gtcattgtca tcaaaattag
      421 ctgaagatgg aatttacatt catggaaatt ttggtttcgc agggggctgg acgatgcttt
      481 caccggctgc agttaaagga agtgaagttc aataaatgct tagtgcttcg ttaaggcttt
      541 tccaaatgca cctgagattt tacagctgat gagaatttgg gacaaacagc ctgtgaagtt
      601 cactggttct gggagatgtg ttcaacacat cccagcctag cttgaaaaga gaccgacctc
      661 ttggaa
//
LOCUS       KCPA01001861             872 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 204896tic ultra-conserved element locus
            uce-327, sequence.
ACCESSION   KCPA01001861
VERSION     KCPA01001861.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 872)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 872)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..872
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="204896tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>872
                     /note="ultra-conserved element locus uce-327"
BASE COUNT          264 a          176 c          152 g          280 t
ORIGIN      
        1 attatgcctt ctttgtgcca agtgataatt tactgcaatt aattatcaaa agatctactg
       61 ctgtcaatta tggtacttgc tctttagaag ctatttacgt atagctaaat tctgtaacaa
      121 atttccattt tacttttatt gttttcaatt aaactatcat catttgcctt ccctctgcca
      181 aatacaatga agactcgtta agaactaatc atgctactgt gacctttttt ttaatccaaa
      241 cattagctag acctgcactg agtcaacact cctattgtta cacctgcaaa ttgtacgtag
      301 agaggagcat acttcagaat taatgagcac agctgtggtc tctcttacat tcaacacttg
      361 taaaatagac ctctttaaag agccattatc acaatattga tagagttatt tatagtactg
      421 caaacgttcc cagtcataac agagtccttg ttatccccca cagcagttca tgttgttgcc
      481 atctcctgga ctcattccac agtttgtgat aaggcaccac gtggacaatc ctttatgaaa
      541 aaagacatta ggaaaacttc tacaaagaca agttttaaag ctgggaatag gtcaagctgt
      601 caagacccag cctgcataag acttgtcatg ttcttgtgct gtgcagtttc ctgcaatttc
      661 tgtgtgggat gtgaaatgaa attataagca gcataagctg caaatgatct gtatggcatt
      721 gtccaaatga gagctgcttt ttgcagttag taagactgtt ttaccataat tcagtaaaac
      781 agatgtaagt tcaaactctt ggtgtcagtc gctgaaaaca aataccacag gtgccaactt
      841 tggttgctaa gggaatacaa gctccttggg ct
//
LOCUS       KCPA01001862             530 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 205005tic ultra-conserved element locus
            uce-6570, sequence.
ACCESSION   KCPA01001862
VERSION     KCPA01001862.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 530)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 530)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="205005tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>530
                     /note="ultra-conserved element locus uce-6570"
BASE COUNT          176 a          101 c           84 g          169 t
ORIGIN      
        1 atatgtaaca tatttcaagt ggatttactt atcaactttt tctagtggta ccaacagcag
       61 tagtgtgaaa tatatctact ccatttactc ttatccattg cacctacttt ctttttccct
      121 ttaattttta tatatggtaa aaatttcatt gaagagagat tttagatgac aggactgtaa
      181 ttttaaaacc aatagaagag gtgtaagcaa tttgagctta gctgaagcat aatcttaggt
      241 tgtcaagaag aaacccattc tccctatgct aatcaatcag tatatcaacc aaccaatcat
      301 ctcctcagct tagcatatat cctaaggttt gatatatcta ttaactgccc atcatgcagc
      361 tggtctccag ttgatgagat tccccctatc ttggcatttg gaggcagaca actgagctat
      421 cagagcctca gataaatact aaagtggaga tttcaatcct gttcctgata gcgaaagaca
      481 atccaggaat atagaacata tttttagaaa agaacacata gagaattaca
//
LOCUS       KCPA01001863             841 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 205116tic ultra-conserved element locus
            uce-2456, sequence.
ACCESSION   KCPA01001863
VERSION     KCPA01001863.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 841)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 841)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..841
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="205116tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>841
                     /note="ultra-conserved element locus uce-2456"
BASE COUNT          286 a          157 c          181 g          217 t
ORIGIN      
        1 tgcaaatcca gagcctggat gttggagcca gactgaaagc aggacagtgc cctgcctgtg
       61 cagatgaggc agaggatcca caaacatgcg ctcagcattt atttaatctg aatggatcct
      121 aagtgggggc tttgctggtt tattttttgg agagcacctc gctatttgga gcacatctga
      181 ccaaatgtaa tatgtctgtc taaaaccaca tactgtattt attttgaaaa cacttgtaaa
      241 agtttgcatt ttccagccac ccttgggata aaggtttgta aaaataaaga gcactttctt
      301 ccttcggatg aagaatcctt gaataagcag aaagaggcca agatgcaggt gatttattta
      361 agtctgtgtc aatgataatg atgtcatggt ttccagcaca ctgtgtccac cccattgtgg
      421 gacgaaagaa tgtcaaggac aattccaaac acaaaacttt gattgtgctg gaaccggaaa
      481 ggcacagtaa gaactccact gcactcttca gttcaaaacc tgcatcctgc agacaaacta
      541 cagaaagcat gggagaaaga gcaaaggaga gggggcttat ctcagagtaa agctatgtgc
      601 tgaggtactg gggtagacag tcaggcacca gggataaaac accactgaat aaaacagcac
      661 ccgaattaga attattgtct atattgtgtg ttttgaacaa taaataagaa aaatatttta
      721 tcagaagaaa aatgtgttat ctaagagtca ggataaacaa tgagtagctt tttaagacca
      781 atctcttttc attagacatc aaggcaccac atcagagcac ttttagaaca ataaaaaaaa
      841 a
//
LOCUS       KCPA01001864             532 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 205227tic ultra-conserved element locus
            uce-4308, sequence.
ACCESSION   KCPA01001864
VERSION     KCPA01001864.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 532)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 532)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="205227tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>532
                     /note="ultra-conserved element locus uce-4308"
BASE COUNT          154 a          111 c          106 g          161 t
ORIGIN      
        1 ttgtcattaa aagcaaggat actatcaagt gagaaagtag acttacattg caattatttt
       61 cctattaact gctgcccatt gctcttgaca ggtataaatt agatctcgcc aggttgccta
      121 cagattaatg agttccaaaa ctggcattta attgtttggg agtaagaggc aagaaaggaa
      181 ggaaaaaaat ctgtatccac ctatgattag aagatattct cttctctttc tgcttttctt
      241 ttctcctctg gcatcgcttg ggtgataact gacacttcta tcagaggatt cctttcgacg
      301 cagcagaaac ttgcagctga ggcaaggcca gaattaataa tctgcgtgag caaacacaca
      361 gctgctgttt gtggagagag attctattaa cgaacagtga attctcataa ttagctgagc
      421 ggtttctgca gctgcctgcc tgaccccaga ctacacaaat tgtgggtggt gttcagcctc
      481 taaatcaatc ttacctaatt actataagca tgttcctcca gtcctaatga ct
//
LOCUS       KCPA01001865             704 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 205339tic ultra-conserved element locus
            uce-2014, sequence.
ACCESSION   KCPA01001865
VERSION     KCPA01001865.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 704)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 704)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..704
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="205339tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>704
                     /note="ultra-conserved element locus uce-2014"
BASE COUNT          229 a          119 c          103 g          253 t
ORIGIN      
        1 aagttggcta ctacatttga attgcaaagt agcaatcaat tagtttatca ttaatcagat
       61 aattttgggg ttcatgaata atatgaaagg aaaagaagaa ataactacca ggataatttt
      121 cgggaaccat ctctcagctt tataaactaa tcctcctcta atggcccttt ttaatgtaat
      181 ttataggttc atcattaccc tttttgtatt agtaattatt tctaaaatac caaagaacca
      241 tctttttttc aaggtccttc cgtgtgcctg atttacagct aggctcatgt tggactctgt
      301 ctttctgagg tttgacattt caaaatattt atagctcttt tacattaatg cctttctcat
      361 gaatctgaag gtgaccgtta tttctttcat cttgttgtaa ttaaatggat caactatagc
      421 tttattattt ccactattta tctgtgcagt gtgttaacac attcagatta gcaaatgata
      481 ttgaacatta tgtgaattat aacaaacaaa tatttcctaa aacatgggtt aaacttgatg
      541 cattggctaa gaaatcgttc caagtgaaag cacaaaatct ttaatatttt attgatcaga
      601 tctaaacctt ctgcccaaag tggcaattaa atttcaatta aactgactga aagcatcata
      661 ttaaatttca gcactttacg agctatcaga taatgctgca ggac
//
LOCUS       KCPA01001866             785 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 205450tic ultra-conserved element locus
            uce-7957, sequence.
ACCESSION   KCPA01001866
VERSION     KCPA01001866.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 785)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 785)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..785
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="205450tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>785
                     /note="ultra-conserved element locus uce-7957"
BASE COUNT          231 a          154 c          148 g          252 t
ORIGIN      
        1 gtactggaat gtcatatttg taatttttat ctttatttcc tctccgtggc gaatttctcc
       61 agtcatttca aagagtttgt tagccatttt ctcataaact ttggcattcc ttttagtttg
      121 tttcagctca tcaaaaaatt cttcccaaac cagcattaaa cctctcattt ctgcatcagt
      181 ccagtttctg gccctcctgt gtttctcagt ctgagaagag acaatgtaac tgggaatttc
      241 tgctgcagcc attgctgact gacctaaaag ggttttaaaa gaggacactt aatatagatt
      301 gagtttttag tttaggtttt ttgtagtgca agacatgcat atgtggataa agaatttgaa
      361 tgacaacaga acatatgaaa cctttttgca acagcttgaa gcttgagtgc acaaaatggg
      421 gcctacatct gacaggcagg aatttagtta aaagctttta aacagagaaa cgtcattttg
      481 atgtcacgtt tccatagcaa cagagcaact gcataagcta caacaacaaa aaccttttaa
      541 ctgaaagcca aagaatcagg acaaagttga caggccatca atattaaagc ttttaaacac
      601 tttaggttta acaagatcta tgcagccttt gagaagctac ttttaagttt ctacttcttt
      661 tttagctttc ccttaccttt taggcagaca atctgctagc agggggtcat ggtcgcctga
      721 acgagctttt aagttgtgcc ttgacagact ctctaggagg ttgcaaggac tgaggccatg
      781 tacac
//
LOCUS       KCPA01001867             678 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 205561tic ultra-conserved element locus
            uce-7877, sequence.
ACCESSION   KCPA01001867
VERSION     KCPA01001867.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 678)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 678)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..678
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="205561tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>678
                     /note="ultra-conserved element locus uce-7877"
BASE COUNT          206 a          125 c          119 g          228 t
ORIGIN      
        1 aactcctatg aagtcgatgc aattaagtaa aatgggaata gagtcttgcc taatgtttat
       61 ttcattttat cagactggat aatgctgcgc tggtggcatt aaatacagct gatctctccc
      121 ctccccttcc gtgcacacat gtttttgtta aaatctaact atttacatct atgtctctaa
      181 gtattgccta caaatcagtc aaagaagagt aggtcattta tcctgcccta ctgtttatgt
      241 attaatcatc tggcaaataa actgctcagt atcctaccca cctcagtaat atttgtgatg
      301 taatttgttt ggatgcccaa atgtcaccag cgttgattgt aagagatgaa aaaaatgtac
      361 ttgctcagca caccaagctc tgggctaaaa tgtaagcatg aaatctctgg tttatttttg
      421 taataatgtt tacagctgtt taatgaccct gaaagggttc agtagtctgg tgttctgtat
      481 ttcttaacag gactgtatta tgcttatagc agccttagtt ctactgtttc tgctgcaaca
      541 ataagaacaa tatctaataa aaattcaata tatattctga tctcagcaat acctgtttac
      601 cagaactaag aactgaagca gtctgtattg gagtatttag aatttgccag tggaccacaa
      661 gataatgtag atatatgt
//
LOCUS       KCPA01001868             677 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 205672tic ultra-conserved element locus
            uce-7623, sequence.
ACCESSION   KCPA01001868
VERSION     KCPA01001868.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 677)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 677)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..677
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="205672tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>677
                     /note="ultra-conserved element locus uce-7623"
BASE COUNT          241 a          122 c          149 g          165 t
ORIGIN      
        1 atttccactc ctgagcttgg tgtgtgcatt tttgtgaatt ccaaacccat gttgcgtttt
       61 gctctatagg accacgcttg taagcacgtg gcttgtggca gccaaggtac aagcgaggtt
      121 caaacatgtc ctgtggtgta cttacaattt gggggacgca gggtgttcgg gatgaattgc
      181 tgagaatata gcgaagcaga aaagcaatgt gagggaatta ggccacagca caaaaacacc
      241 taatattgat tttagctaca aaccgtagtt tgattatggc ccataaggta gaagcaagac
      301 tccccgagct tgtcatttct catacatgca gcgatattag gaggtatcat cgctgaggaa
      361 ggaagagccc agcaccaaga aaagtaagag aaagagaaag agaaaagtag aaaatttaga
      421 ttccctataa taaagatgaa agaaagaaaa atcttcatat tttatcttag aataaagaaa
      481 gtttattttt ccagtcagat tgtctaggct tcacccaaat ataaggctgc aaagacagca
      541 gttgttatta ttgtgacata aagagacatc taagaggtga ttcaataacc cagacaacga
      601 gagcatccat tctaaaagac agctggaaca gcgacacaga atgtcataga aaaaacatta
      661 acaatcaaac aacaacg
//
LOCUS       KCPA01001869             601 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 205785tic ultra-conserved element locus
            uce-1965, sequence.
ACCESSION   KCPA01001869
VERSION     KCPA01001869.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 601)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 601)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="205785tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>601
                     /note="ultra-conserved element locus uce-1965"
BASE COUNT          193 a          136 c          109 g          163 t
ORIGIN      
        1 aaccgggcgg agatccaagt tcatctgggc cccagagaaa ggcaatgctt gtgtttagac
       61 cgcacaatac tgacataaca ttaacagatt tacatatgca aaactgtgaa gcaacaggca
      121 ttccccctca attgacccac agcttgtagt ggctgccgag ttattccctg cttaggctcc
      181 gtaaccaagt gggcgtcatg cgactaccat ctgggtacca cttatttaaa gctggcagtc
      241 tctctgtaat aggcaagctg gcaataagca ggaagggaat aaattgcatc atttagttaa
      301 catccacttg ctttgcggct gttaaaaacc catgactgaa taataatttg gttatttctt
      361 ttgccagaca atgctgtcag ccaaaagtac tacgcatgct gcaaaacgtc agcttgcaaa
      421 atttccactt taaaaataaa ttaaagaaat ttgcagtata atgcgagcta agaagttttt
      481 ctaatgctag caactcaaaa gcaatcgagc tctaaaaata aacatgcact actgtagtaa
      541 ccagattctg cttttttgtt tttatcagcc acccatccat taaattacca aacatcacca
      601 a
//
LOCUS       KCPA01001870             378 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 205887tic ultra-conserved element locus
            uce-6327, sequence.
ACCESSION   KCPA01001870
VERSION     KCPA01001870.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 378)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 378)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="205887tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>378
                     /note="ultra-conserved element locus uce-6327"
BASE COUNT          135 a           76 c           43 g          124 t
ORIGIN      
        1 ctagcgaatg acaaatacag ctaaatactt ccaaatgcac agtaaaaaaa tatcatgtcc
       61 gtatatctcc ctgacaggtc ttcatgcatt tcacatttca aaagcatgac agggatctta
      121 tttctaagat aaattcccct atctacttat ttcctcgtgt atttattgtg gatctaacct
      181 tctactacaa gaaataaata agcaggttaa gtagatgcta tcttttaaca aatagtttct
      241 tcagactgta ttacaacttt atgaatgtaa aataaatccc tcatttttaa atccaccaag
      301 acgtaccttt aacagcattg catctattga acctcaatgt gtactctatt attcacacac
      361 aataaaaatg ttaaaata
//
LOCUS       KCPA01001871             531 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 205996tic ultra-conserved element locus
            uce-698, sequence.
ACCESSION   KCPA01001871
VERSION     KCPA01001871.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 531)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 531)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="205996tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>531
                     /note="ultra-conserved element locus uce-698"
BASE COUNT          156 a           88 c          111 g          176 t
ORIGIN      
        1 aaaggcaaat gggactgggg ggatacagaa ggcgctgttt gaagcttgtc ggtgtcagtc
       61 tggaagatgg tctgcaaaga agtcttttgg cagcacaaca gggggtttgt ggattttttt
      121 tcccgtgaga gatcttaacg aactgttacg atttttttcc gaaagggacc attgcaactt
      181 tttttggagg gagaaaactg atgtcttcta tgcatccgat tcttaacaaa gctgcaggga
      241 gcttgaaaaa atgcagactg tacaaacgct tacaaataac tgaactgact taagatcaga
      301 gtttactttt cagatcaaat tgtttatggt tttacaaatg tgatttctac ttgccaactt
      361 tttttttttt gtaacttgtt cccttatacc tccttgattg aataccagac agcctagacc
      421 tcagtacaaa aaggtattga aacatttttg atacataaca gacctcagtc ttttttaaaa
      481 attaatatat tttcaggcgt atttttgtac agtgaaaagg gaacattctt g
//
LOCUS       KCPA01001872             685 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 206107tic ultra-conserved element locus
            uce-6831, sequence.
ACCESSION   KCPA01001872
VERSION     KCPA01001872.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 685)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 685)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="206107tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>685
                     /note="ultra-conserved element locus uce-6831"
BASE COUNT          214 a          147 c          120 g          204 t
ORIGIN      
        1 tttactgggc tatccccttg cataaattta cggagtcact cacagagtca cagcagaccc
       61 cacttctgct gaagaggtgc cgaagcactc ctcacggcca ctgcgtcaat ctggcaccat
      121 ggatcccagg gaaatccagc tctatacggg gaaaatttag aatctccgtc ttcatgctgc
      181 acctagtgaa cacaacatac accctgtact cttaagcgcc cttcctgcct ttcctagtat
      241 tacagataat ttgctagttt cagagtgtac ttattacagg actgtcagag gagtttttgt
      301 ttcaacaaca cgttaacttt actgcactta taaaaaacat tatgtgtccc ctgtgattct
      361 gtgtgtttaa gagcagcgaa atgttattga tcccagtgtg acaaatcaag agttaggtaa
      421 tgtctacaaa actcaatttt ctgcaagaca taaaaccctt tttatgaaac ccttccttaa
      481 gaaattcagg gaaaatacac acaaaaaatg agagcagaaa ggtcagaaac tatttttttt
      541 taattaatgt aatccagttc tagcctaatg acaggcatat gatgaccgag gcaaatttaa
      601 agcagtattt actctcactg ctttaaaaca gtatgtgaaa actctagttt tctgaaatca
      661 ctttgatatg attaagaatt gtatt
//
LOCUS       KCPA01001873             718 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 206218tic ultra-conserved element locus
            uce-6019, sequence.
ACCESSION   KCPA01001873
VERSION     KCPA01001873.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 718)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 718)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..718
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="206218tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>718
                     /note="ultra-conserved element locus uce-6019"
BASE COUNT          212 a          146 c          205 g          155 t
ORIGIN      
        1 gaagcaaagg ctgcaaatga gtcagacatt ttgaaggggg aggcagaggg agtggaggag
       61 agcaggagaa agggagagct caataccaca accaagaggg gcctgccagg gccacacagg
      121 cctcccagtg ccttaacccc tcaaaggaaa gaggggaccc cccttctttg tttttaatta
      181 cttcccattt taatcttgat ttgcatgtcg atctctcaga actgggccag ggactctaca
      241 aagcccttgt cagcaactcc cccaataata aacaggaaaa ggcttaaggg gcaaatcact
      301 tgcatgttaa tgagactgtt tgctggagtc aagagagaaa acagcaaaca aacaaatgga
      361 ctgaattcca gcggcagctg tttgctcctt aatctcggct tgtcagagct gccctttgat
      421 gggacacaat ctacacaaac gattgtgcta aatcttctaa tctacgtcct cattattaca
      481 tcccttctta cgcatgtaaa tcagggacaa actcatttta atatttagat agattatgga
      541 agggaagggg aggggattgg aggggaaagg agctgctggt ggtgtctgct cctgccggtt
      601 aggaggggtg ttaatgagga gcacagggag gggagcaggg cagcagcgga gcacctgttg
      661 tcaaggcaaa atggggaaaa ggggcaagga ctggagaaga tggcaaggtg atgtgaca
//
LOCUS       KCPA01001874             675 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 206329tic ultra-conserved element locus
            uce-3490, sequence.
ACCESSION   KCPA01001874
VERSION     KCPA01001874.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 675)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 675)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..675
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="206329tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>675
                     /note="ultra-conserved element locus uce-3490"
BASE COUNT          204 a          105 c          152 g          214 t
ORIGIN      
        1 tcttgcagga gagaagataa ggtttaatct gtgttataag gaagattttg gcttcttaaa
       61 atccttgccc atgcttttgg aatcttctgg aaattttttt attcaatcaa gtctgaatga
      121 aatgcagaag taagatggaa aactcacaaa ccatgcagca ttttcgtgat ttgctttcct
      181 cctttgcctt ttacttgagg gcagaactag ggtagagaaa taatttttgt tctcttctga
      241 aaggttacag taataaagaa actcttgtta acatcagagt atatggcagg caggagtttt
      301 cacagtctgg cattgtttat tttaccagca atttggaacc ttctgcactc ttaaaatatt
      361 ggcaagaaaa tatttaactg ttaactgttc tgtggcctgc atgtgtttga agccctgggg
      421 aggaggaatg cttgaggaaa tcgggttttt ctcagcttat gattgaaacc agaaggtgca
      481 gaatattggt agaaggtgaa agcaatgtga cttcaaatta gaattttacc caaatgtgga
      541 actgatggga gaatgtcaaa caggtcacgt atgagcaggg ccctgctagg ctgatggagc
      601 aacacaaata ggcactacag atattaattt aaaaatgtga tagtaattgt gagtatttgc
      661 atttatcctg gcctc
//
LOCUS       KCPA01001875             570 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 206432tic ultra-conserved element locus
            uce-4102, sequence.
ACCESSION   KCPA01001875
VERSION     KCPA01001875.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 570)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 570)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="206432tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>570
                     /note="ultra-conserved element locus uce-4102"
BASE COUNT          169 a           80 c          107 g          214 t
ORIGIN      
        1 aagggggttc tgagttcttc ctttatggct agaacagtaa taaatgatgc tcctgtatct
       61 gtaacataag tactgctgtc tgtcagtaat gaacttcgca actttgtttt ccaaagtaca
      121 ttttattttg atcagtccag tatattgcac taattctttt agttattttc attatatgaa
      181 atctacaaag tgtgtcagaa gagatgaatt agtctattta aatgttgaac tgatacttgt
      241 gcagatttta aatttgcagt aatctgggtt tagcaagaaa aatgacagtt caccagtgtt
      301 tagttttata ttgaggtgct caggtttgaa taaagtggtt tttttgatta ctgtttctta
      361 ttgagggttt cagaaggttt tattgcattt gtatagttcc agacaggatg attctctgta
      421 tgggtcactt ttaagatgct tacaaaatta atggcacagc taaatataag cttgtcctgt
      481 ggcactccag ttatcctatg ataaatcttt agatgctgaa ataattgggt atcttaccac
      541 atccatttag aagtacaatc aaaatagtaa
//
LOCUS       KCPA01001876             707 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 206542tic ultra-conserved element locus
            uce-149, sequence.
ACCESSION   KCPA01001876
VERSION     KCPA01001876.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 707)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 707)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..707
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="206542tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>707
                     /note="ultra-conserved element locus uce-149"
BASE COUNT          238 a          126 c          132 g          211 t
ORIGIN      
        1 atttgattaa gtttttaaat caatattata atcatttagt tcacaatcat gcacatttaa
       61 cagtcaattt aactcatctg gtatctcaca caaccaacac aatatgcaag aaacaactgc
      121 tgggaattgt ttcagatgct ctaaagtatg ttaatttcca aagcaaaatg acttgtgctg
      181 tgaattttaa cgcacttgaa agcctgtact ttctctcgtt ctggagcaca aattttgcat
      241 gtctgaagag ctgtgattca tcttaagaaa acccatcttg tgttaaatgg aatggaaact
      301 ggactaagtg gtcaaatgac aagtacattc atattcaagc tgtattataa atgcatgtac
      361 agtaatttac gtctctcagc taccacaaaa ggctcttgat aagcaggtaa tttgctaaat
      421 ggactccttt atccaagtat tcgaagggcg ttacaagaaa aatctgcaga ggcattaatg
      481 tgacgtaaag gtcaagcatt gtgacatacc tttcaaataa tcccgcctaa cttgcgatat
      541 gatgaggagg ctgctggcag cactgttcag tgtgaagccc ttgatgtggg tctcagcact
      601 aaaagaagca gacatttaga aaggaattac tgacatgctt ctgatacgat aataaatggt
      661 tgagcaccaa ggtgaaatta taaaaactac tgttcgtatg ttaaaaa
//
LOCUS       KCPA01001877             577 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 206653tic ultra-conserved element locus
            uce-5560, sequence.
ACCESSION   KCPA01001877
VERSION     KCPA01001877.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 577)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 577)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="206653tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>577
                     /note="ultra-conserved element locus uce-5560"
BASE COUNT          180 a           90 c          122 g          185 t
ORIGIN      
        1 ttttattaaa gctttagaaa tttccaccat agccccttgg actaatttga tgtcagagac
       61 aaagatgttt tgaaactgaa aatgctgttt ggattctggc ctgcagatga gataatggcg
      121 ggaagtggga gtgaaagcaa acatcagtta taagactttt taaaacatgg ttgcttctag
      181 aattatactg gtagcattaa ctactctgct aaatgtaatt tcagagcagc ttggctatgc
      241 tgggaccaat aatgtttcag cagatgttaa cagtgaggga atttaaagat tacagagttt
      301 catgggtgta gtaaagctgc agtgggaaca gaaatattgc agtagctgtt atgttctgag
      361 tgcaccacat ttactgacaa gtaatacatg agtgatagtg aggaccatgg gaacagaact
      421 ttatacttac tggtcagcag cctataaatt ccataaatta aacaaagttt tatgtatttt
      481 tcatttcttt ttagaatgat cttctctaag ggcctctgct tcatgttaat tccatcgaca
      541 aagcgtgtct ttcagacata agggtattta catgcat
//
LOCUS       KCPA01001878             467 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 206758tic ultra-conserved element locus
            uce-4216, sequence.
ACCESSION   KCPA01001878
VERSION     KCPA01001878.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 467)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 467)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="206758tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>467
                     /note="ultra-conserved element locus uce-4216"
BASE COUNT          137 a           88 c           79 g          163 t
ORIGIN      
        1 ggcccaggga acacagatct tgattgttaa atccatccat actttcccta gggctataat
       61 atgccaaaaa cattaaatag cccacttaat acataacctc attctgtatg cttgactatt
      121 ttgtttttaa tttttcttcc ctttccaggc tgctcaaatg agatgggatc aaagaaaaaa
      181 attatcctca ctggattttg ttaaaatatt aataggttag ggttgactgg ctaaattgaa
      241 tatctatgct gatcttgctt gcatgtttaa cttgtgctta ggaaaatatg tttcctaggt
      301 gataaccttt tatgtaccag cctgacttca ttgaaatgca tagagataaa aatatgtcac
      361 actccatggc catgctattc ttgtgtggca gtgtgattat tcagatgata attgaccccc
      421 acctgtagac agctcaaatt ctgtagtcaa tcattctatt tgatgtt
//
LOCUS       KCPA01001879             542 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 206870tic ultra-conserved element locus
            uce-4223, sequence.
ACCESSION   KCPA01001879
VERSION     KCPA01001879.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 542)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 542)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="206870tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>542
                     /note="ultra-conserved element locus uce-4223"
BASE COUNT          191 a           99 c           99 g          153 t
ORIGIN      
        1 ttttttaatg caactgttaa aataatcttg caagagtccc tgagtttaaa aagaagcaga
       61 aactatattt accgtggtaa tataaataca taaagacttc aacatttgaa actggaggct
      121 aaagtatgta aagtgcttac ttagatgata tgaataggat actggcaaac aaaagcagca
      181 gtgtgctcct agaatgctgt gcttcaagga gtttccttgg caacagaaat gcagttccaa
      241 aagtagacag aactttcctc agaaaacata ctattaataa caaccttccg gaacaacttg
      301 gaacaatttg actacttggc aataaaatgc caagtgttct gcaaattaat ctaacacata
      361 acagttatat gtttctcttg cccataattc tcctgaactg ggggcctgag ttctctgctt
      421 tagaggatac aaatgtgcaa agcggttcca aatgctgcgc aaacagagag acggctcaaa
      481 tagcagccta taaggatcaa ttaatgttct tcgaatcatt ttaacttgta aaccagatta
      541 gt
//
LOCUS       KCPA01001880             419 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 206976tic ultra-conserved element locus
            uce-3138, sequence.
ACCESSION   KCPA01001880
VERSION     KCPA01001880.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 419)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 419)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="206976tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>419
                     /note="ultra-conserved element locus uce-3138"
BASE COUNT          109 a           85 c           68 g          157 t
ORIGIN      
        1 ggttttcctt gacttttgga ccaactcata tcctgcctta ccttttagct gtttcacatg
       61 gatcccattt ttattggact cttgatgccc ggtgatgttt tatgcataat gatgctcaag
      121 tttaattgag ctgtaagctt cggtttaatt atgagccttc gtgatacctt cagcactttt
      181 tcttctctga ttactgtaac tggttctctc caaccccttt aaaatcctta atctattaaa
      241 ccacttatag acaagtcatt tttaggagaa agtctaatta ctctgttgta attatcttaa
      301 tgcatcctca gtatttagag ataataacct gagtgaaatg cacttcgtgg actattccaa
      361 acattcccac ttaatgatct gagtcacgct gtgtgcttaa aatgaattta tgtggagaa
//
LOCUS       KCPA01001881             673 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 207087tic ultra-conserved element locus
            uce-7859, sequence.
ACCESSION   KCPA01001881
VERSION     KCPA01001881.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 673)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 673)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..673
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="207087tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>673
                     /note="ultra-conserved element locus uce-7859"
BASE COUNT          223 a          115 c          116 g          219 t
ORIGIN      
        1 gaatactgta gtttgtttgt gggcatggaa gttaatttta atgccagttt ttatatctga
       61 gatactgtaa atgaatatct tcaacttata ttgcccatcg taaacttttt taacctgtga
      121 gtcattttca aaataataaa cgtaactatt ccataaaaat atctcaacac agaagagcca
      181 gaaaagtgaa ggacatgaac agatggcaca tcaatcttct gcatttatac aatttgtttt
      241 ttaatgcaaa tagtgtgggt tgcctgctct tgccttggat attgttccaa agacgagcac
      301 attttcttat ctttctggat caatgtgaca tttgcagtta tcataaagtg ggagcccatt
      361 taatgatgtt aatgcttcct taatgtaaaa ataaaatcac ctcctttata aaagcaaaca
      421 gattaaaaat cccaaagaga ccattgaaat ctgtgacatt tgcagttact ggtggctaga
      481 tggcttgatt atacacaggt atatcttaaa agcattgttt atgctcaata atcagaacat
      541 taaatagcaa tgctggagtc tccccagcag ttttaaagat gtattaataa aatggaggca
      601 gcattttatg cagcctgttt agatcgttcc caaaaactgc aaacaatcaa acttatggcc
      661 ttatggcagc ctg
//
LOCUS       KCPA01001882             672 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 207199tic ultra-conserved element locus
            uce-7857, sequence.
ACCESSION   KCPA01001882
VERSION     KCPA01001882.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 672)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 672)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="207199tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>672
                     /note="ultra-conserved element locus uce-7857"
BASE COUNT          182 a          150 c          152 g          188 t
ORIGIN      
        1 tttaaaacat gtcatgagaa atccccgctt aaaaatcagt gtttgtcagg ttcaactcca
       61 gccatggctt ccccgtggag gttggtttgg attccagcat cctccagctg aaggaggcag
      121 ttgcccagcg acagggagtt ccagctgacc agctgcgggt gatttttgca gggagggagc
      181 tcagcaatga cttgacactt caggtaagaa tcccttggta gcttctcgct tggactgctg
      241 ccagctgcac tgcctctgcc tctaatgctg ccaatctgat gttcatgcct gagatctaat
      301 aaaataaata gtgcctgggg attccttgaa ctttactcca cactgcttca ttaattctga
      361 ccttcttaat tatgcattaa aacagcaagc aggaagggta gggaaagaga aagagagcac
      421 ctagtgaata aatgtttact gactacagaa gcaagccatg cacaatttct gtatctgttc
      481 aatttctatc ttacttattc tatttgaatc ttaatgaaga aggatgtgaa taaattgctc
      541 taaatcaagc tgcacagtca tcacatttta tagaatttgt aacccaattg tgacccctgg
      601 acagctgctg ctgctgctgt gcctgcacag gtgtgtgatg ctggggtggt tccagatcag
      661 aaagcccaca aa
//
LOCUS       KCPA01001883             475 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 207305tic ultra-conserved element locus
            uce-8026, sequence.
ACCESSION   KCPA01001883
VERSION     KCPA01001883.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 475)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 475)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="207305tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>475
                     /note="ultra-conserved element locus uce-8026"
BASE COUNT          163 a           55 c           89 g          168 t
ORIGIN      
        1 aagaaataaa ttttattagg ttgtaataaa atattaatac actaaatgtt ttctactggt
       61 tacatttagc taggcaaaaa tttaaaaatt ctgctggcat gtttgtttgg aataaaaaag
      121 cctgtaggtc aagtctttct gagagaatgc caaatgtctt tgtgtccagt tatttatggt
      181 ttcagataat tgtacagaaa atatcaaatt tgcatagtgt gattattgct gattatttat
      241 ctagcagtca aaatgtttca gtggttccta ggatgacaga ttgacaagta cttaaaactc
      301 attcatttta tgaaatttgc atgtaattag gcaataatga aggggatgtt tgtggacagc
      361 ggattatact acaatatact ggaagtgatt caaatgcttg acaaagtgtt aacattatct
      421 tcagtttcaa ctaagtcttg aatatttggc tcaaaaatga aatgggttat ggaaa
//
LOCUS       KCPA01001884             652 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 207414tic ultra-conserved element locus
            uce-4732, sequence.
ACCESSION   KCPA01001884
VERSION     KCPA01001884.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 652)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 652)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..652
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="207414tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>652
                     /note="ultra-conserved element locus uce-4732"
BASE COUNT          206 a          140 c          121 g          185 t
ORIGIN      
        1 ggccctgggt tccgtttcta ttcagggctg atttataagc caatggaaac ctgatgtaaa
       61 catatgatca atgagtccca tcattgctaa taataacccc caaccggcac actccctcat
      121 ctccaaagcc atccctttag gctattagtt tcgtccggct aatcctctcc acttgcctgc
      181 tgcttttacc ttggccatcc gttcagtccg gcagactcag aagtaatttt atacacagca
      241 gagagcgggt ggaattgatt tttcgctcag tgctcagttc ccatctgaat aattatcaat
      301 tttactgcct cataaaggga agagtcaaaa tttcaaatca attcaaaaga gcttctgaga
      361 ctatagaaac tgtgcatgag aataaaggtc aaagttgtca gtgacctcag gagatgatgt
      421 cagatattag taccctgaat agttgacatc aaaggcactc aatatgatat gactagtgct
      481 aatgcaaatc atatttatgc tgactgctgg agaccagcca ttaatattta aaagagtatg
      541 tgaaagcctg cattcaaaat aaatataacg tattccacag aatctgaagt taataaagac
      601 agatcgttgc ctagtcatac gctaagtgaa tgattactgc atattaacag ac
//
LOCUS       KCPA01001885             554 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 207527tic ultra-conserved element locus
            uce-819, sequence.
ACCESSION   KCPA01001885
VERSION     KCPA01001885.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 554)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 554)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="207527tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>554
                     /note="ultra-conserved element locus uce-819"
BASE COUNT          171 a          106 c          100 g          177 t
ORIGIN      
        1 tttttttttt atcaaacctc tccaaaggga ctcatcatat gcggggctct atgaagagaa
       61 aaagaagagc attgtcctta tcacctcctt ccagaaagtg gcagagtaat aggactttgt
      121 aaggcgaaat gaagcccagt ctgatggctg ctgattaaaa attgactctg ccacatcaaa
      181 gaagagttga aggtgaaaat gatgatcact tccctctccc agggaccctg caccatttct
      241 tttattcaac cttgaaaggt tctttctgaa taagataata tccctcgagt ccattctgcc
      301 taggcggcat gggaaaatgt agatcagtat gcctattctc tatgaaaaaa tgggattttg
      361 ttaatgacat agcactctaa agtgatggct tgtatatggt aaatgctgag aaattaatta
      421 taaaatgcta cttaaactat agatcaaatt aattgctagt atacatctac taaaatgacc
      481 acagtaaact caaactgcac ttcccacctg ctgctggaga tttctgtact gttttttttt
      541 ttttcttatt ttat
//
LOCUS       KCPA01001886             578 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 207638tic ultra-conserved element locus
            uce-4, sequence.
ACCESSION   KCPA01001886
VERSION     KCPA01001886.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 578)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 578)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="207638tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>578
                     /note="ultra-conserved element locus uce-4"
BASE COUNT          193 a           98 c          109 g          178 t
ORIGIN      
        1 agactcttcc tccttcaggc agaggacagt ctcccaccgt ttaaggctgt tattacaaca
       61 tttggaagtg actaatgcta agtttcattt cttacagatt ctttagaatg aaactatatc
      121 taaaaagtgc agatacgttt ttatttcttt tgcagttcag gggagggggg agggaaaagc
      181 atcactgatt tgtatattaa agtgcaagca tctgtcctac tgatgacatt ctagggaagc
      241 acattagcat aaaatttaac gatgtcaaat aagtggatgt gaaataggga ctgcgtaaag
      301 acactatttc caagcctgac agaaacatca ctgtttagaa atgcaaatga taccattatg
      361 ttcaataatt atatgaaaat atgaacagtt cagcatgttt tccagccctg atggcggtta
      421 atgggatgta cgcttatgta aataactact attaaagcta atgctgaaaa aaactaataa
      481 attcatacta aagcaactga tttagtacgc ttttaaaccc cagcagtgct cacttattag
      541 aaaggagtgc attcttatgt ttagaactca ttactgtt
//
LOCUS       KCPA01001887             697 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 207746tic ultra-conserved element locus
            uce-3910, sequence.
ACCESSION   KCPA01001887
VERSION     KCPA01001887.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 697)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 697)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..697
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="207746tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>697
                     /note="ultra-conserved element locus uce-3910"
BASE COUNT          231 a          118 c          119 g          229 t
ORIGIN      
        1 atgttccttt ccaccaaccg ctacatcgct gcattaaagt ttggattcca agcattcaag
       61 gatgtaaata tattaaacaa tgcatctatt tgtgcaaagc attctttagg agggacatcc
      121 atgtgctttt aatcagtttc atgctgaatg aaagaaaatt gtaaactacg cattaaaaga
      181 aggtttgttg aaagttatat cttctgcatc ctaattcagt gcttcccctt gctttcagtg
      241 ataatataag taatcttcta gcaacattca tgaggaaagt ttgatgtgga tttacgctag
      301 tggagctaca ttacaatggg tagatttaag gtattataaa atgagttttt ggatttgtta
      361 cagaggtatg aaacccctaa gacacagaca gataggactt ccaacatatg gcaaccactc
      421 ttattataaa acaaaacagt gttaagtcaa agtacctgat tacaattcac tagtgctatg
      481 tagctctgat agcaggctta tatttaatgc catagaaaca atataattta tttttctgtc
      541 ttcccttatc ccttcgttat tgggtttgta ggctttgaaa ccttaagcaa aaggacaaaa
      601 tataaattat agaaaacatc aaagtatagt gaaatcgaat gacattcctt acgatcctta
      661 cagagatatc taacacattt cttatgtgca gtttggt
//
LOCUS       KCPA01001888             747 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 207857tic ultra-conserved element locus
            uce-7840, sequence.
ACCESSION   KCPA01001888
VERSION     KCPA01001888.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 747)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 747)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..747
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="207857tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>747
                     /note="ultra-conserved element locus uce-7840"
BASE COUNT          223 a          135 c          155 g          234 t
ORIGIN      
        1 gagctgagca cgggccagct cagtgcacct cagctagggg ccatttgtct caggctcttc
       61 tctacccaga tgtatgatcc agagagaagg aaaaaggagt tgaggtttaa actcttatca
      121 ctaaagtgag tctccctcta cattaaaaaa ctatccagac gttgtaacag gaatgggttc
      181 agttcttatg tcataaattt gtgtgtgtag aaaaaagact tattggcgaa tttagcagta
      241 tttttcgttg aactggcagt tgctaaccat tacaccagta tttatttgat tcttaaagag
      301 cacaaaagca tggactacaa ataaagaaga tggagtaata gcttttgact ggaccactag
      361 ctttaaactt gaaatgaagt gtccagtttt gagttactgt gtccaaatgc catttgtaca
      421 gtttgaaaag tgggggcatt tttccagctt gtcactgtta gctgtagttc attccagtga
      481 atgatatcac tgaaggagca gttgttctgc tataagtact tcactcatga ctggaatgta
      541 ttaaatgtat taatctgtgc ctgagagtgt aatttaggga agccctacat ttgacacatt
      601 cttgtacatc cttattttat tgccttatcc tgcaggtaac aatgtctcaa aagcaaaggg
      661 acgggatgaa gttaaaatta catgtcacca aatattatat gcacgttttg ccactcattt
      721 cgctgtcaga attacggatt ttcaaca
//
LOCUS       KCPA01001889             335 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 207955tic ultra-conserved element locus
            uce-2889, sequence.
ACCESSION   KCPA01001889
VERSION     KCPA01001889.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 335)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 335)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="207955tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>335
                     /note="ultra-conserved element locus uce-2889"
BASE COUNT           89 a           80 c           56 g          110 t
ORIGIN      
        1 tttttttttt tttatttctt ccaggagtgc tgatgataag aaaagcaatg tctaaatctt
       61 cttaatggtg tttatgcaag cagttttgct tagctgcagt ccctgccacc ccctcccccg
      121 tccaccctcc cctcccatct ccctgctaat atcgctgctt cattcctttc cctgttggct
      181 attactatgg actacagcga atctaaaact aaataatccc cttagtgtca agttttctgg
      241 gctgagcaaa taaatctaac caaatgcatt atctaggtag aggaggctgt tgtaaagata
      301 aaggctattt tactttaagg caaagagtaa aacca
//
LOCUS       KCPA01001890             767 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 208063tic ultra-conserved element locus
            uce-1253, sequence.
ACCESSION   KCPA01001890
VERSION     KCPA01001890.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 767)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 767)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..767
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="208063tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>767
                     /note="ultra-conserved element locus uce-1253"
BASE COUNT          212 a          156 c          147 g          252 t
ORIGIN      
        1 atgacagcaa aaataacgcc ggtgttctcc atgcaccatc aaggctttca ggtctttagg
       61 ggaaggaatt tccttttcac tgtcccctca aaactatttt gattcatgca aatgaatgtt
      121 actgttttta aattgaccag tcatcatgta aggtcctatc attctaaata tttgatgaga
      181 agctaaggtc tctccaaggc acctctaata ataaacttcc tgcaggaaat ttagaaagga
      241 ttatgtgttt caaggaggag ccggctgctt aaagtaaatt ctcttgttga gtcatttatt
      301 cccttaatag gaattttctg atctgctgtc attcttgttc acacactggg tgtcactgcc
      361 tctaaaacac ttgtcattct ttaatggaaa caaaatagtc attgcagtca gagccgcaat
      421 gtcattccac taccccttgc tgcgtcggca atagtgaaaa tgacagagcg gctctcagta
      481 ggggtaatta aaatgtaaat attgatattt tattatttga aattactttc cagtgcggca
      541 tttaatatct ctccatctgt gcggctctgt ttagcggtca ctttagtgca gctctgggat
      601 gccaagcggc ggcttgatcc ccgttatgtc aaaatgcttg ttgctgctta attttgatat
      661 ctaattaagt ggaaaagtac agtccacact gtaatccatg gcatcttaac cagctgcttg
      721 ggtatattta gaattaatct ccactatgga atcatcctaa tgtatgc
//
LOCUS       KCPA01001891             451 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 208164tic ultra-conserved element locus
            uce-3101, sequence.
ACCESSION   KCPA01001891
VERSION     KCPA01001891.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 451)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 451)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="208164tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>451
                     /note="ultra-conserved element locus uce-3101"
BASE COUNT          156 a           87 c           82 g          126 t
ORIGIN      
        1 gctcatccca gaacacaaat aaaaaaaatg tggcatttct ttgctgtaga aaatgcacca
       61 gggataacct cccctgtgct tgagcctata gaattagtat taatgccgtg acaccacaca
      121 acagacatat ggaagcgtta tttgtttctc atttaccaaa cagataagaa tatggaaata
      181 gtttcagtcc atttgtttga tgagcttcct aagccagtaa taaacaaatc aatacaatta
      241 gttttggctc atcatcatta gaaaccttca ctactgggat acaatttaat tatacctctt
      301 gttccacagc aaaaagcctt tgaaaatgga ctactttgcc aacgatcgaa ccaggaggga
      361 ggagcaagag gatacatcag tgatggagga gttattatct aagcagggtg tacaacatat
      421 aaagcatatt gtgtaataca atttccctga t
//
LOCUS       KCPA01001892             673 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 208275tic ultra-conserved element locus
            uce-693, sequence.
ACCESSION   KCPA01001892
VERSION     KCPA01001892.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 673)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 673)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..673
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="208275tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>673
                     /note="ultra-conserved element locus uce-693"
BASE COUNT          207 a          122 c          115 g          229 t
ORIGIN      
        1 cacagtcaca catggcttta gtttactctg gaaaactgga acttgctacc actttttcct
       61 tgtcctgttc aggtagttca ttattttgtt gacagttcgg ttccattaat ctggtatttt
      121 tgggaaaatt acttgcagac cttacatttc tctactgaag gtgatcaaat aggcattgaa
      181 tccctcatgt aaatgatgtc ttaaagttaa aataaaatct attttccaga aagtaactgt
      241 aaaactattt tatgcaagat ttcatgtggg ataccttaat ggttgaataa taaattttac
      301 ctcataaaaa tgaaattcaa taatacagta gctttctcag cgcagtagca tctggttgaa
      361 tctcatgaga gccaatattt tccaactcat taggatcatg tcgttctgta tgtcgtcaac
      421 attgacttag ccaagctacc tttacttaca taaccgccaa actattaaat aggtctcttg
      481 tggagtgaag tcaaatattc ctcttatttt gcttttgcct tggaagaaga gaagaaaatg
      541 tacatactgt aacatttaaa catctggtct aaaccacatc agggtaacag tgaggaaagt
      601 aacaggattc agtattcttc ccaggtgtac atatattgtg tagctgctgc atagttcttt
      661 taaccactta gga
//
LOCUS       KCPA01001893             539 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 208386tic ultra-conserved element locus
            uce-6955, sequence.
ACCESSION   KCPA01001893
VERSION     KCPA01001893.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 539)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 539)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="208386tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>539
                     /note="ultra-conserved element locus uce-6955"
BASE COUNT          180 a           81 c          101 g          177 t
ORIGIN      
        1 ttgtaatcaa cgttcaaaag actcctgagg tgtgaacact gaaaatggaa atttggcaga
       61 acgtgataat ctagtatttg tgttaatttt tcctgagcac cgatgaataa catgttcaag
      121 actcatgacc ttgccaaact ctttcttttc ttttctaaaa gttgatcagg aaagggcttt
      181 gttatatcag tgggtttgtt ccatgccaca aatttcatgt acgaggtcac ttggaatata
      241 atgtgtagtg aaagaatctc attaggctaa aatgaatgta aaatgtgtca atttgatcca
      301 aatgagaact gtagtaaaac catgtttgat gttcatgtgc aataaatctt taacatttgt
      361 ctgtaaagta ttagagaacc cagagggaaa tctctatttg tgataactgc acatttccaa
      421 tgatttttcc tataatcctt tgttgacatt tagcatatgg caacagaaaa gaagatccta
      481 aaatgagaat tattacttat tattctaagg taaacaagat gggcaccttg aatagaagg
//
LOCUS       KCPA01001894             391 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 208489tic ultra-conserved element locus
            uce-7190, sequence.
ACCESSION   KCPA01001894
VERSION     KCPA01001894.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 391)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 391)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="208489tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>391
                     /note="ultra-conserved element locus uce-7190"
BASE COUNT          144 a           56 c           91 g          100 t
ORIGIN      
        1 agaaaatgaa ttttaggaaa ttgggaggaa gttcgcagca aacagtggat tatattggtg
       61 ttatgtagct atctcatcaa aaggtagcaa atgcacagga ccttttgcgc ttttcaattt
      121 gaaagaaaat tatttcatta gaaaaaaaag aaccatcact ctggatgttg gagaatgcca
      181 gagcctgatg aaaccagctg aagagacaaa ctgagtgtac ggatgcagat tagccttcag
      241 aagatgaggg tgtaaaaggg atttaatggt aggatggatt atagaaatcc ttgtaacaat
      301 gttaaataat tatagttcca gccgagatca aagcagtgct gattgaaccc cctcaagctg
      361 ttaacacgga gtatcttgaa ggaaaaaaaa a
//
LOCUS       KCPA01001895             552 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 208690tic ultra-conserved element locus
            uce-7611, sequence.
ACCESSION   KCPA01001895
VERSION     KCPA01001895.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 552)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 552)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="208690tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>552
                     /note="ultra-conserved element locus uce-7611"
BASE COUNT          165 a          104 c           98 g          185 t
ORIGIN      
        1 tgcatagttt ttagttcagg agttcaaact gaaaatgctt cagaaaatgt agttttttag
       61 ctcattaaaa cccaaagcac tttgggactc gctagctgac tgaaggaaag ggtatgaggt
      121 gtctactatg taaggcatca tccagtggct gccatgctaa ataacgtgtt taaagcagaa
      181 tttccaacag cagcaagcat tatggtgcta atttcttaca tcattgttct tttcattaat
      241 taacatttct caaccgttag tgcaattatt gcagtgcctc tgtactgtat gtctcttttc
      301 atgattaata aggagtcatt atatttccct ttcctgaagc agtcaattaa catggaatac
      361 tttccattaa ttactgaatg tttaaaacca gcatgctgta cctggagagc aatctgctct
      421 aggaacctgt gacaccaatt gcttttaaaa gttctcttta aattttattc caaaaacaca
      481 agcaatttag ctggctgtat taatttgcct ccgaagcagg gctgtgaatg agaaacatct
      541 tttaatctca tg
//
LOCUS       KCPA01001896             532 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 208802tic ultra-conserved element locus
            uce-6200, sequence.
ACCESSION   KCPA01001896
VERSION     KCPA01001896.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 532)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 532)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="208802tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>532
                     /note="ultra-conserved element locus uce-6200"
BASE COUNT          149 a          108 c          110 g          165 t
ORIGIN      
        1 ttgcctcttg gcacaccata tatgcactag caagtgctca cagtttcagc tgcatttaag
       61 gaaatattgt tgtaaggctt ttatgtgctg tacttcaatc agctagtgcc agcagtatcc
      121 caatagaaag accctcaaca gaccattttc agcattttgc tgcaattaaa ctcctctggt
      181 tttagccctc aggcaattta gtaccttttt acatatgcac attatgaact tttgaccagg
      241 gcctggtagt catatattag atagcagctt ttgaaagcag tcttaacaag ttcctcagag
      301 tattacagcc agagtcagtt gtggaaaagg taatttaacc aacttgcagt gaggccattc
      361 agaatcgtac tgatgatcct aaatatgtct tatccttgtt tcctctggaa gctggtagca
      421 agagctctca aagaacgtga ttgatctttt attcagtagc taacgagggc tgtgattcta
      481 ttagtgctct acaaggcaag ggaacagtga tttaatgaag tgtctggcga gc
//
LOCUS       KCPA01001897             747 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 208913tic ultra-conserved element locus
            uce-3154, sequence.
ACCESSION   KCPA01001897
VERSION     KCPA01001897.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 747)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 747)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..747
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="208913tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>747
                     /note="ultra-conserved element locus uce-3154"
BASE COUNT          205 a          176 c          135 g          231 t
ORIGIN      
        1 aaaagataat attctattac tggtatgtgc aacttaaaag ggcactactg tctttggagg
       61 taacgagata ttcttttaaa tggatgcatt atgcataact aacctatttt agtttgaata
      121 aattggcttc caattcagca agaccaaata tagaattagt atatttttca cttctttaca
      181 catagctttt aagagtgaaa gtgaaaacag taaatatgca ctaaataagg aacagcttgc
      241 tctggagtct gaattctcta gcctaatgtc gatccactga gttgccccat ttctctctgc
      301 tcagctggac cacgggttta ccatcaagag atcagggtct ttggactact accaacaacc
      361 aggaatgtat tggataaggt atgagatggt gcagcgccaa cagtcagtgt ttccatggca
      421 acgtgctggc agtctccatt aaccagttcc ttcagtggat aaacatgctt tttgatttgt
      481 tatccggtcc atatgctgct ttatcagttt cgttttaatc ttgattgaga tgccacaccc
      541 cctcattccc tttcttcacc catgcctcac acccacattg ccagctttct cttcatcgca
      601 catgctcagt atcaatctcc cctatagtta aaaggacagt gtatatagac agatatgctg
      661 aagtacgcac cctccccctc ccttctgctt gttaaggcat ctgctttccc tgtgctcctg
      721 tttcaaaaca cacggagcag caacagg
//
LOCUS       KCPA01001898             663 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 209021tic ultra-conserved element locus
            uce-3238, sequence.
ACCESSION   KCPA01001898
VERSION     KCPA01001898.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 663)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 663)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..663
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="209021tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>663
                     /note="ultra-conserved element locus uce-3238"
BASE COUNT          214 a          113 c          115 g          221 t
ORIGIN      
        1 aaaaattaaa cataccacta acttttaaca tatctaattt ggacactaac ctgaccattt
       61 ctggtgtatg catcagttca ttaatacaga aaaatatgct atcaaacaga cgatcaaatt
      121 tcatgtaaaa taagctccag cattaaaact gttcctggta ttttatgtgt aactctgtgg
      181 gtagatatat ttcttgctac cagagcaaaa ctgatttgtg tgatggttcc ccatcacgaa
      241 atcacttgga aggttgtgag ataaaatgtc gcttaggata atgtaattgg ccttaaggta
      301 caggagttga attattttca gtgatttata atctggaaat taaagactca ctcattttct
      361 aatttaattc catcttcaat ggaaaaatgt tcactctgaa ctaaattggc gagtaatgtt
      421 gctaattcaa atgcagatgc aatttcgatt ctggtagcag tttgctgtga ttgacgagtc
      481 cccaatggat cataatgatt cttatctccc aatctcacaa attctctagc agttgtgata
      541 ataacttcag ctaaggagaa aaggcaaaaa ataaattctc tgctgcactg tcaattcagg
      601 ctttgctttt ttcctgacat ggaatggggt ttatttcaaa tctattgcat gttggagaca
      661 aat
//
LOCUS       KCPA01001899             674 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 209131tic ultra-conserved element locus
            uce-1983, sequence.
ACCESSION   KCPA01001899
VERSION     KCPA01001899.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 674)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 674)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="209131tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>674
                     /note="ultra-conserved element locus uce-1983"
BASE COUNT          178 a          131 c          149 g          216 t
ORIGIN      
        1 acagatctta gtgatttgtg gttccttcta atgttcaggt tcagatgtgc aggtgttgct
       61 tttgtcagct gaatgctgcc tgatttctgc tgctatgtaa ttcacctgca tcaagattaa
      121 gaaaccacat tttattaaat aagcttggaa acaagatgaa tgtattttgc ttttgtgtat
      181 gaatatctgt ttttctgatg agcatttaaa atgtttccta gtacaattgg gaggaatgca
      241 ttatctctca tataaaagca gtacagtgcc gaaatagtcc tccttaattt tggtcagaat
      301 gaacaaaagt gtctgtgttt attcctgcct aatgcatcac aaatctgctg acatgctaac
      361 cttggagtct tggctggcgg taatcaggcc tgtgcaccgg caggaaagat gtacctaatg
      421 cactccatca gtgcagtttg catatggaag ttctcacagg ggagctgccc tgtgccagct
      481 gagggttacc tgcccactgc agttattgta tgtaattatc gaaccaatct gttcagccca
      541 gcagggttta gatggtaatc atgaagcaac actttggaaa ggaaagatgt aatgcactct
      601 ccccttctcc tgtgagctgt gtgaagttgt tgccactttt aaagctgtat tagtaaagct
      661 ctggtctcac agaa
//
LOCUS       KCPA01001900             384 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 209241tic ultra-conserved element locus
            uce-2176, sequence.
ACCESSION   KCPA01001900
VERSION     KCPA01001900.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 384)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 384)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="209241tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>384
                     /note="ultra-conserved element locus uce-2176"
BASE COUNT           99 a           83 c           82 g          120 t
ORIGIN      
        1 agaaaatatg ggtagtgtaa gactctgctg tttggcaacc agaggggcct gtgtagtttc
       61 tacccttcag tgcatcagag caagattcca gcaaaaacac atgttaaaag ggagggctgg
      121 gtgttcagct gaatgaactt actgttacct tctaacataa gtcttctttt tcctgatact
      181 gtctgaattc gaaacatcta atttaataca ttgaagggcc ccgtcttcct tttatttcct
      241 gtctgtactg gagcagtcgc ctgtttcaat tatgactttc tccagctcct acattttttg
      301 tgctccagct ggctcaaagt gcacttcctt ggaaggtaaa atgcactaac tgtgctgatc
      361 agagactgat agctggaaag ctac
//
LOCUS       KCPA01001901             748 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 209352tic ultra-conserved element locus
            uce-1636, sequence.
ACCESSION   KCPA01001901
VERSION     KCPA01001901.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 748)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 748)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..748
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="209352tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>748
                     /note="ultra-conserved element locus uce-1636"
BASE COUNT          232 a          166 c          141 g          209 t
ORIGIN      
        1 aaatgcaacc actttcgcca ataaacacta gatcatttaa gggaagtccc tcaagagtta
       61 ctgcttcctg attgatgtaa tcttaaccac ggcctgtggt ccaaaaattg ccaatcaatc
      121 atgtatacat tacaggaaaa attgggttaa cgtgtctgca cgccggcaca ttggtaacga
      181 tccactccat gctggcacaa gatcaccttt gaagaaaatc accctgttgt tgtatcatgc
      241 atttgttttc acctcaccat tttgttatga tgtataggca acgagcctca tgtggccttc
      301 ctaatctgaa aacgagccaa gagaaagaac gtgttccgaa gtgttgaaag aaaggcctat
      361 tctctgccta gggaactgca gctaatacag gaaatgaaca caagttttct gtaagccatc
      421 cagcttctga atcagctgtt ccttgctgaa aaccttcacc tccaaatcta aagactgaac
      481 gccaaatatt aaagttatga aaaatgtgag tgttttcctc ctctttcccg tgttccttca
      541 aagctgtgta aatctaactt gaattgtaag cggctttatt ttaacaagtg tgagttatca
      601 gagttcgcat atcaaattaa acccaatgaa ttctggactt gttttaaatt tcaagccaga
      661 ggccctaact ccctgcattg cacttggcag ccagccagac ttagtaataa agtgctaagc
      721 agaagacagg aaatactaga gaagtcga
//
LOCUS       KCPA01001902             685 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 209462tic ultra-conserved element locus
            uce-1120, sequence.
ACCESSION   KCPA01001902
VERSION     KCPA01001902.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 685)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 685)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="209462tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>685
                     /note="ultra-conserved element locus uce-1120"
BASE COUNT          210 a          113 c          140 g          222 t
ORIGIN      
        1 tgagtacata catgtctctt gacacaagat ttttaggtac aactgatgaa actttatctt
       61 aaacatatta aatcattgaa tacacttaag gagattaatt tcaactggtt tgttatttgc
      121 ttaaggcaac aagcaattgt aaacaacacg aggtgtagat aattgattgt cttaatattt
      181 actatatgca gtcatataag atgctaattt ttaatacttc tttagctata agaatgcatg
      241 tttgctttct cttgtttcac acagaacaga tggatgcttg actgcctgct aatccacagc
      301 tggaatggtt tcagcggttt tcacgttgct gggttagagt ggcttttcta gtggactgag
      361 agggcagcaa gagagggata tcattattca tcagtatccc agtgggatcg ctgccagcag
      421 agattaattt tttctgttat gcttgtaaaa caagctcagg tggagtctct aatcctcagg
      481 gcacgggtgg cagatcaagg aagatgctac aaagctagtt aattttcaga ttctagggga
      541 aacagaagct ctgttagatg tataaataca tgattgcaaa tttaagtagc tcaaatccaa
      601 atgggatctt cgtagacatc tggtcctgaa attctctgtt ttcaaaagaa gttcttaatt
      661 catgccagag gcaaaatatc ttcaa
//
LOCUS       KCPA01001903             954 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 209573tic ultra-conserved element locus
            uce-1719, sequence.
ACCESSION   KCPA01001903
VERSION     KCPA01001903.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 954)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 954)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..954
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="209573tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>954
                     /note="ultra-conserved element locus uce-1719"
BASE COUNT          315 a          172 c          159 g          308 t
ORIGIN      
        1 atttaattga aagatatttt aacctatata tttgccaacc agaaaaataa tgaaaagcca
       61 taaaacagta aaacttctgg cacagcaatt gcatgtagct acaacacact ttatggacac
      121 attaaaaatt acaaaaggtg cagaaatact caatctgtgt ggatgcaaac tactatgttt
      181 acaatgttac ggtaacttat tctactagct ggcaataata agcataacat gtttgtaggc
      241 atgcaatcat gaactgataa aatagaattt attattaact aaagaaaagc atgtaaaacc
      301 taggatgagc acttagccac ctcagctcat ctgaatatat tcaaggttgg gtgaaactca
      361 ttattcagga ctcgcagcct tgataacttt gattttcatc catccatagc atggccaaaa
      421 ggtaccattt aatgaagtac cattcagaga gtaaatgggg tcatataata gacagtgcgg
      481 ttgcaccttg tgttcatgta ctgatagctg ttaagggtgc agtgatgaac caacagagct
      541 catttctcct tggtaataaa ttcatgctat taatatttat caaatgtgtg ggccgtctca
      601 actgagccac tgcacatgag accataaatc tctactatca tatcaatttt gaagcttctt
      661 ttgtacagtg tataaatttt agtaatattg accactcttc tttcaaacca atttgaggcc
      721 agcagtgtag ctcactactt cagatatctc tagttccaaa gggaacttta aactgtggtt
      781 tcattttaaa tcgctcatct aagattctgt attaattgcc caccatcaaa cgcaattagc
      841 aattctttca tgtgtggttt atgtaatgta atacttcaat tacattattc attcaggttc
      901 tgttttggat tataggctga aaattcttta ttagtgtaga tgtaaccatg ctgc
//
LOCUS       KCPA01001904             634 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 209681tic ultra-conserved element locus
            uce-7291, sequence.
ACCESSION   KCPA01001904
VERSION     KCPA01001904.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 634)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 634)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="209681tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>634
                     /note="ultra-conserved element locus uce-7291"
BASE COUNT          174 a          123 c          133 g          204 t
ORIGIN      
        1 gcagccagca ctgcaaacac taagctgaag tggattgcag ttgtgagtag gagcttgtgt
       61 gagaaggaca cagctctgtg aaggtgattc gtgaaagctt ttgcaaagac aactttcagt
      121 tgtagaaagc agcacgccgt aacccttgga ggctgtcatg accatgaatt cagttaatac
      181 atctgttttt gtgttaattt cccatatcca ttaacatgtt ttgttccttt gcgatttaca
      241 gcgcagaact ctgccaatgc aggttttgca aactttgatg catttggaca gtctagtggc
      301 tcgagtaatt ttggaggttt ccccacagca agtcagtctc cttttcagcc ccaaaataca
      361 ggtagaactc ctagcacttt tgattaatac ttaattgaaa taatccttac ctttatgttg
      421 gaaggtaccg aagttgagtt tttcttgcgt atgcctgctt taatgcgatc aagctatctg
      481 aagctctggg gaaactcaaa atgaattcct tgtgtttggt gttgacccca atgctactca
      541 gaagtctgat ttatggcact gtgtttgtta gctctacacc tgaaataatt atgaaaagaa
      601 tcaactctac tgcttttaat aaatattgaa ttga
//
LOCUS       KCPA01001905             762 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 209792tic ultra-conserved element locus
            uce-2338, sequence.
ACCESSION   KCPA01001905
VERSION     KCPA01001905.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 762)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 762)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..762
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="209792tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>762
                     /note="ultra-conserved element locus uce-2338"
BASE COUNT          224 a          132 c          155 g          251 t
ORIGIN      
        1 acctgtaatc ttaaaaactg catcacccaa acttggttca taattgtcga gggccaacac
       61 aaaaatgaat aacacttatc tgaactgtat ctattcaact gtgaggacaa gtgctaaaat
      121 ctgaagatta acaatcacat gtatgtatta acaggtatgt taactttcca gatgcatcca
      181 ttcaaataag ttttgtaaac atttacctgt atccaagcgc tttacagggg actcatcatc
      241 aacctcagaa tctccacaag cactccttga tcttttcctt gggtgcagaa gtgtctccaa
      301 ccttggaagg actacagaca aaaaggtttt ggtccctagc tgtggagaag ttggctgggt
      361 ttcagtgttc tttgcagact tttgggggct tatacttttc gatttgcaga agagaatgga
      421 tgtacgtctg tttacatcag ttgatgactc agctacagca gaaacagtcg actcattgag
      481 attactgtca agtaagtgtt ctggagtgtg tccatttatt tctttctgaa tggaagtgct
      541 atataattca ttatcaaatt ttactctttt gtaaagctta ctctgctctg gattgagttc
      601 tactggtttg agggttggtg gttctgaatt agtctccaag tttgaaggaa gaggtaatgc
      661 atctgatggt tcaagtttag ggggagattt atctcctgaa aaaattataa atagagtgtg
      721 atttttgaaa acctgtagtt ataaagtcta ttataaaact ca
//
LOCUS       KCPA01001906             769 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 209905tic ultra-conserved element locus
            uce-5915, sequence.
ACCESSION   KCPA01001906
VERSION     KCPA01001906.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 769)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 769)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..769
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="209905tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>769
                     /note="ultra-conserved element locus uce-5915"
BASE COUNT          210 a          185 c          163 g          211 t
ORIGIN      
        1 tgtttctctc ccaccctgct tacgtgtcat tttcattctt actttaacct ccagtgaaat
       61 aatcagatta cacaaagccc ggtaacacct ccgtgtccct ctctggcagg agattgttaa
      121 aacattccct gaaagaccta ctgacgtgat gtcccccgac tgtccaaacg tagcaccatg
      181 ccggcactgc atcctcgcgc tggggaaaaa tacctcggtg ctcgcaggca ggaggctccg
      241 ggtgaccgtt gagtgcaccc ggattttaca aactgtcata tggcgagata gcggtgggtt
      301 tcaatgccgg cacctattca gtcagcgcag atgaactaga atcaccattt cagttatatc
      361 atagctcggg gcgagaacat gtcaccctct ttatttccag ctcggaacaa gctgcttagg
      421 cagatgctaa ctgtggtcct ccctgccatg ttctgtagag tggcctttgt ctgggttaat
      481 tgagccccca ctccatttaa taggctgttg aagtcttatt gaaacagagc tagtgccgca
      541 ggttaaatac attgcagtgc tcttgttaat cccctcatta acggagctgt aaagcttgtt
      601 gagagctgtg agtttgcata tattatcaga gagttcttca ctcaagtgct atcaataaaa
      661 tgacaaagcc agtttgcaaa tagtgaaatc aacagtgaca caaagctaga taccttaaaa
      721 aaataaacaa gttaataact gataaatcta attttcacac ttggaggat
//
LOCUS       KCPA01001907             771 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 210013tic ultra-conserved element locus
            uce-7246, sequence.
ACCESSION   KCPA01001907
VERSION     KCPA01001907.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 771)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 771)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..771
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="210013tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>771
                     /note="ultra-conserved element locus uce-7246"
BASE COUNT          218 a          153 c          176 g          224 t
ORIGIN      
        1 gagctaaaga gttatgtaga gatgtaatgc tgcgaacagg gttcttgtgc agatggtggc
       61 ttgctctttg catggctttc acctcctctt agaggcagct ccagttaatg ctgatataaa
      121 actgcctgtt aattggagta cacggagata atggtaggta taatctctaa gtaaactctt
      181 aaaagctctg gaaaaagggt ataaaacctg agtttgcact ctttgaagat agactcatca
      241 gtgtgcggag cagacttctg ccttgaggcc atttatagtg ccgaagcttg tgaagctaaa
      301 acagtttgat gtgtaattgc aggaggaaat ggaaaacctg ctgagcatgg caggatatag
      361 tgccttatca ccctttatgt gcatccagtg cttgctgaaa ttgccagcgg atccgcaaca
      421 tcgacagaac ggtgacattt ttcatgggcc gccgtgttct gaatcaacac tgcaacagcg
      481 cgattagagt aggtaaagta gggggaacaa tcaaagagtt gcatgtgaca gatcaggttt
      541 tagtcattcc ctgctcctta ttgcctgctg tcgtgtgtga tatgcaaaac agcttctcca
      601 gacgcattac accttcacat tacctgaaaa ttgaatttta tttggtggcc tgcatataat
      661 ttatagcact cctccaatgc acttcagttc tcatttagct aaaagtgtgt tctttatttc
      721 ttactggcag ggaaacagaa ataaaactga atattcagca ccacttacag t
//
LOCUS       KCPA01001908             493 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 210108tic ultra-conserved element locus
            uce-5490, sequence.
ACCESSION   KCPA01001908
VERSION     KCPA01001908.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 493)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 493)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="210108tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>493
                     /note="ultra-conserved element locus uce-5490"
BASE COUNT          131 a          111 c          125 g          126 t
ORIGIN      
        1 tcctcctgaa atgagagcat tgcagagatt tgcatacaaa cccacttgag tttttgtgct
       61 gcagcacatc tggcaatttt caattgccac gggcttgcag ggagcaattc cagccttcca
      121 ccagctacct tgaatatact tcacgtttaa tttccctctg ttgccagagg cgctgtgttg
      181 ttatgacagc tgatctgcca tggaatagct gtaaaggaaa atcaaccgct ccagcgattc
      241 ccggcgcaat ttatcggcgc tcgtgtctgg cggctgctgc cgcctgtcgg ggtaatgaca
      301 catgatgggt gattaaagtg caagtcccta aatcaaagct gtgccagcag tttgaagagg
      361 cagaaaacag cacgcgttgt gggaggacct cattagtttt gctagcaaga gggagcaggg
      421 agatctccaa gattcacaaa taaacaattg gaatcatgga acagtttggg ttggaatgga
      481 ccttaaagat cat
//
LOCUS       KCPA01001909             789 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 210207tic ultra-conserved element locus
            uce-818, sequence.
ACCESSION   KCPA01001909
VERSION     KCPA01001909.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 789)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 789)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..789
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="210207tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>789
                     /note="ultra-conserved element locus uce-818"
BASE COUNT          225 a          178 c          147 g          239 t
ORIGIN      
        1 aaaaatagaa atattattac tgctctttaa gtatccattc tgtttcattt tctcagcaaa
       61 ataataaccc ttggaccttg taggcagcca aatatcaggc cttaaccatc tgtcaactgg
      121 cttagattca gcaagcatac tcccgtagtt ttagttctaa ttgtgtttaa tgctgcacta
      181 attatttcaa tggggaataa ttttgtacag tcaaagttga ctcattttat aaactggaag
      241 ctcctcagct ataaattggc aggtctcatc cttcatttct cctaagcgtt gtgccaaagg
      301 ggaataagta tatggttgct ctgtgaccaa atgtcatgtg ctgggcagaa acattgatcc
      361 tggctattaa tcactctgca agccctccca gtaatcaaag ggcacagctg caatgatata
      421 tgaccagtgt cagagcagaa agccctttac aagactgcat gcctaccagc tgatggccag
      481 tatgtagtac agcatgcaca ctagccagcc caaaatgccc aggccaatta atcatcaccc
      541 ctaactgttc atactatcat taaacacctt tattggctga attatctgag gattcttacc
      601 ccctaattac ttaggtctgg aagctaggaa ccttctcacc tggatacaaa aagctgccta
      661 ttacctgctc taggcccttt cattctctct tcagtaagag tttgctgacc cagcagtgaa
      721 cctgtgacta ggagaaaatt ggatgctgtt gtgactgatc ttggtgtggt tcatatcaat
      781 ttgttgaaa
//
LOCUS       KCPA01001910             768 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 210319tic ultra-conserved element locus
            uce-762, sequence.
ACCESSION   KCPA01001910
VERSION     KCPA01001910.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 768)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 768)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..768
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="210319tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>768
                     /note="ultra-conserved element locus uce-762"
BASE COUNT          242 a          152 c          122 g          252 t
ORIGIN      
        1 ggctacagct aaactacaaa cagtgttagt gctgtgtcta acttaataaa ttatttgaaa
       61 catcccatgc actgatgtcc aaacaaacaa acttccctcc ccctaagcaa actgtactcc
      121 tgagatggct ctcctaacat taagaatcac tggtatttca gaaataaagg agatcaccat
      181 gtgaaaaatt atctttaaaa atggagttta atttgcatat aaggaacagg agatttatga
      241 cgagcaacac agcgcagcac tgcatctgcc tagtatcagt cgtaatttag attgtttgtg
      301 accgatctta aattctaaag catggagaag atgaagtgct ctgttgctgt gttattgtca
      361 ggagtctaag acttaccaga gatttattag taatcttatc acaaacatgt ctcaagtttt
      421 tgcttttaat atgtgccaag ctcctctgag gaattttcct cactgcaatt atatttctca
      481 atgcatgcat tctgaagctt agttgatttc cttcccaaaa taaagcgacc tatcattaca
      541 ctacagtagc tctgctacat ttttcctctg ctacttaata atcaatgtat tcatcattaa
      601 aatctgagcc ctgaagcaat ggtttttagc atattctaat gactagcgac ttgcaaatta
      661 cattgacctt tcatgtacat tctgtaagca ccttgttcta atgtgtactg tatttatagt
      721 ttgccaatac aaactagcca aagattggat aattactgta atctatta
//
LOCUS       KCPA01001911             783 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 210428tic ultra-conserved element locus
            uce-5805, sequence.
ACCESSION   KCPA01001911
VERSION     KCPA01001911.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 783)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 783)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..783
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="210428tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>783
                     /note="ultra-conserved element locus uce-5805"
BASE COUNT          224 a          130 c          172 g          257 t
ORIGIN      
        1 caaagtatta cgtgccatat gttatgcaat actttggcac cagggatgag ttaagggtag
       61 cccttagcac tgaatgccct tggttttgct ggtttatgtc acaactttaa ccttgctttt
      121 ttttgggtgt taatttaatt tggctgctct gtatgtgaga catcttgcct gagtgaattt
      181 aattgcacca ttgagtaaaa ctaaagccat gaacactgat gcactacaat tctagcagag
      241 gtataaggtt tagttttata tggcttcttg tttggagtta ttaactatat ggaggaataa
      301 attttttaaa acattacaaa acccacaatg taaagttgcc atgagccagc caaaaataat
      361 acatatggca ttcaggagtg cagttgctaa ttggctgctg cctgagaaaa tggtacactt
      421 ggcttctact taacactgtg ggtttggcag aaagccagat ttggggtgag gttgtgaatg
      481 aagctgcatg tggttaggga ggagttcaaa tgattcatgt cttgaagttg tagtaagcag
      541 tgcagtatgt acttgggtaa gcagctggag gaaactcctc acccatgtcc tcccccacaa
      601 accttttcct acacctccac ttgtgtctcc atagtccata tctcagatag tgtttaaatt
      661 gtttactaaa ttgtttagag atttaattca tgtttcaaca tttcttttct tttagatgga
      721 gaatggagag gaagtagaag tagaggaatt ctatgtaaag tacaaaaact tgtaagtagc
      781 gtt
//
LOCUS       KCPA01001912             702 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 210540tic ultra-conserved element locus
            uce-7354, sequence.
ACCESSION   KCPA01001912
VERSION     KCPA01001912.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 702)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 702)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="210540tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>702
                     /note="ultra-conserved element locus uce-7354"
BASE COUNT          164 a          156 c          182 g          200 t
ORIGIN      
        1 cccccccaat tttgctggca ctcgcagaca aggcatttgg ggtatgtcag taccagccca
       61 tctctagtta tcaacagaag tttgtgaggc aaaatagcta ttcttatctg tccagcagct
      121 gcttcaaagc tctttctatg ttcattctgt gcccaactct agtcactcca aggtctatca
      181 gatcttcctt ctgtagattt ggtaaatgtg tgccatctat ttcattgtcc ataaatgttt
      241 ctttatgttc acctaagttt agactttcca accaatctgc cacatctggt ttagtccaca
      301 ggtggacagg cttagttgta aaaggcttat ttgagattgg ctgttgtaat attgagggag
      361 aaggagacct gctgcgccct gtggtcaagc caaataagtc cccagaaggg ggctggctgg
      421 gtaggctaaa tacatcggac agagttggag aaggagatga ggctgaagca gaagcagtca
      481 gaggagcagg caggatgtct ttattaatct ctgttggtga aaccacaggg ctgggagcgt
      541 gccttgctcc tgaggtcctg ctgtcatagt ctggggacct gctctgcagt gtgatcggct
      601 ggctggctcc gggtcggaca gtgaaagtga ttgttgtact tcgtgtacct gagacagtac
      661 tcatgacttc cgtgctcctg caattgcaca ggcacagtta ga
//
LOCUS       KCPA01001913             734 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 210649tic ultra-conserved element locus
            uce-3890, sequence.
ACCESSION   KCPA01001913
VERSION     KCPA01001913.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 734)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 734)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..734
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="210649tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>734
                     /note="ultra-conserved element locus uce-3890"
BASE COUNT          215 a          129 c          163 g          227 t
ORIGIN      
        1 ggcattcata gcctgcagtg aattaatatt tgggcttaaa agctgttccc tgagcagaac
       61 aatatttgca gttttcatac aaattaggtt ttttacttaa tttcctttca cagaacttca
      121 gcatactgtg tactaaattt cttaaacgtt ctgtgtttta ttggtgagta atggttaaag
      181 aaaatatcag actctgtgat aaccaaggat gtgctcaagt ggcatgaata cttcagttcc
      241 agatgggtca gctttagggg tcaagttgtg aagagaaagc catcacacac acttcatcaa
      301 caccgtggaa tgagagacca gtgcatttac tgagcaatgg atttccagtg agcgtataaa
      361 ctaattggtg gatgaacatg ccccaggagc aatgatttta aggtcatagc aggctcagtg
      421 aattgtgctg acttacactg tgtctcagtg atagctgatc ttaccaatga gcagtttaga
      481 ggcattcaag cctgaactct tttccatgtg ccttgaatag catgtcagcg gtcactgttt
      541 ctgacatcct ttatatttgt ccagtcagct ctaaatcttt aggttgggct tcagcgtact
      601 caggaaagaa aggagagaag tgattatttt cagtcagtga gttctgaaga tcttagtgtt
      661 aattatgcca aacacggttc gttcatcaac aaactagaaa tgttagagag aagagaggga
      721 actgatattt ttgg
//
LOCUS       KCPA01001914             777 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 210759tic ultra-conserved element locus
            uce-624, sequence.
ACCESSION   KCPA01001914
VERSION     KCPA01001914.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 777)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 777)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..777
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="210759tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>777
                     /note="ultra-conserved element locus uce-624"
BASE COUNT          231 a          162 c          154 g          230 t
ORIGIN      
        1 gcctatatag gtcaaggctg ctaggcttca ctgctttgtg tattacagtt taaagaatgc
       61 tctaaattca aggtttctaa tctatgggga aaacttccta taaactcaga tttacaactg
      121 ctaatgcact gaagaaagaa aaaccttcct gctactataa aaacaaaata gtgtggcctc
      181 tgtttctttt ctgataagag tcttaaatac caaacattta actgcataat aacattccct
      241 ggcagccagc agcctgctta gcagatacat aaagcaggta aaaggggaaa aagttaattt
      301 cttggctgaa tgattccatc ggtagctata gggcaaacta gaaagtcttt tagtaaagta
      361 gcagttgatt cttctatcaa tctgcagcac acacactctt ccaaggaatg cattaaatat
      421 gaaaatcata tcccgttatc atctgttccc agctttcagc ccagttttcc ttaatgaatg
      481 ctgtagccta agggacgcgc gtgctgctgg ctcctcggaa taatggagtg atgcttccgt
      541 cctgcctatt ccagagctgc ctggctgagg ggcttccaca cacagtcaca agtgactact
      601 cttgccagca tgctccaagt tattacaaga tgtttttaga catttcatct aaaagagctt
      661 tgctgctttt agtaaaacag ctctggtctt gaactgtatc atttatatgg agataggagg
      721 agggattagg agcctgcatt accgcagata tatggcagca gatatttaag tattcct
//
LOCUS       KCPA01001915             595 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 210869tic ultra-conserved element locus
            uce-3692, sequence.
ACCESSION   KCPA01001915
VERSION     KCPA01001915.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 595)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 595)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="210869tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>595
                     /note="ultra-conserved element locus uce-3692"
BASE COUNT          193 a          118 c           87 g          197 t
ORIGIN      
        1 aaaaacatgg tatactctac attcatttat taaatacctt atgtttccaa acagagcttt
       61 ccatatttgc tgcaaaactc tgtagcttca tgctttacac aactgagcaa agatgacagc
      121 actgaaatga gctattacta tttccatcag gaagatatgg ggaactagtc tgtgtctttg
      181 aggcatatat attcatcaaa tggaaaagct ttaaaaagca gcactatcta agatatcagc
      241 atcccgtctc ccttggagac agctaagccc catatttatc taaattatct tggtaatatg
      301 acagagtgat tgctcactaa tggtcagtaa cagttttctt tgtcattttc ctagtcatta
      361 cctcctcaga atgaactcag gaataaactg ctgatgcacc gtgactggaa tataaagctt
      421 atcatcacaa cagaaaccac ttctattaaa atcacaaacc tgtacattgc acttctgaca
      481 ttttggttta ctctattaca aaatctaggg atgagctcta gatagatatc ttattcttaa
      541 aacagaagta aagtaatatt tattttacac agctgtcttc tattttcttt ctttt
//
LOCUS       KCPA01001916             749 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 210980tic ultra-conserved element locus
            uce-1170, sequence.
ACCESSION   KCPA01001916
VERSION     KCPA01001916.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 749)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 749)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..749
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="210980tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>749
                     /note="ultra-conserved element locus uce-1170"
BASE COUNT          218 a          141 c          152 g          238 t
ORIGIN      
        1 ttatactgtt ccaagtaata aatttagctt ctggcaactt aatttgtaga taactctggt
       61 tgttcaaaga taggattttt acattaaact tggaatccgc atgactgttt aacatcatta
      121 agggaatatt atattgactg caagtaactg gtttccatgt ggttatatca atctatttct
      181 gtaagactgt acactagttg ttcccctaga gtactccttg taatgctgag aaagtgtcag
      241 aaataatgac tgtctaccta tatctgcaat aaaacgtaga gcatggatat tatagttgta
      301 agtatcaaag atttatttca tgactgcagg taatgatgaa tcttttagca caactaatgt
      361 ctagaggaaa cctctcttct tctctgagct gtcacatgga gactatttat agggccctta
      421 gtgctgtggg gctttagcat aaagaggcaa tgtgtctgag gtgccactgg atggaaatgt
      481 tagcaagggc tccctctcat tgaagatctt ttagtagata gcattagatt ccctctttgt
      541 gtgtttacgt ccccccaaag acaggggaca gatgtttaac atcagaccat taatccctta
      601 gcccaggttc ctgtgacagc gaaaacccaa cagaatgagc cctttgcctt cgctcagtgt
      661 aaatgctgca atttactgct gatttacaga gtagggtcag gccattagaa acttggcaat
      721 cttctgtaca gctggaaaac aatatgcat
//
LOCUS       KCPA01001917             648 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 211089tic ultra-conserved element locus
            uce-3310, sequence.
ACCESSION   KCPA01001917
VERSION     KCPA01001917.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 648)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 648)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..648
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="211089tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>648
                     /note="ultra-conserved element locus uce-3310"
BASE COUNT          210 a          118 c          133 g          187 t
ORIGIN      
        1 tttggaaaga acaaagttct cattatactg actgttgaga ttctcctttg tgaaactgtg
       61 acaaatctaa tagtgttttt taatagagtc aacaggcaga tggatgagat tttagacaga
      121 cagagacaga agtgtataaa cttcagccaa acacaaagaa agagaagctg cctgggaaaa
      181 tgtaactgag agtaactcag catggcttgg tattgggagc tgaacttgca gctttgacaa
      241 ggctgacttt aaggcgacct tcagtgaagc tctttaacag tgtatgctgg gcaatcgctg
      301 gtaaatcttt attaatttta attggcggca cccatttata agaaccatta aaaaggataa
      361 attgagccca tccggcgtaa tgtcttttgt taattagttt gtcagcactg ttttaatatc
      421 ccctaatgac ttcatatttc aggcctgaca ttaaaggaga cgctgtgaga aaggaaatgg
      481 tcttatcacc atgtacattt ttttgaacaa aaagtgtcct tccaggcctg accaaggtta
      541 ggtgtcattt aactcagata gacaggtatc accctatcca aacctcacct tgctactgaa
      601 caacattttt atggacacac aacagcagaa ggaattaaaa gtcattag
//
LOCUS       KCPA01001918             581 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 211194tic ultra-conserved element locus
            uce-5866, sequence.
ACCESSION   KCPA01001918
VERSION     KCPA01001918.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 581)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 581)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="211194tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>581
                     /note="ultra-conserved element locus uce-5866"
BASE COUNT          184 a           94 c          101 g          202 t
ORIGIN      
        1 ttctacataa tactgctaaa tattctcagc aattcaaatc agtaacattt aatttagcat
       61 ataatataaa ctcagatatg tattcctttt aaatcctgct ttcagcataa agacagactg
      121 ttggtgtagt aaattaaagc tgccttactg cagctatttt gtccaatgtt ctatcacaga
      181 cccatattaa tattttatcc cctttaatat cattacatga tgcaggctta atttaaatag
      241 atttgacggg ctcttggttg gcttgacaac cagagggaaa aattaatgtt ctgcatttaa
      301 tctcagctca aggcgctaaa ttattttaga ggttgaagct gtcatgcaca tcatgctaaa
      361 ttattgaatg taataactat tagcctgatg tctatttata gatattgttt acttcatgta
      421 tcttcagcca attttgaagg gaacattgca atactgtact gctctgtctt ttacagatgc
      481 agtattggag gcaacagaaa aatgatggag ttggaagtct ttaaagctat ggaaacaaaa
      541 gagcttttct gttgtgtggt gtacagagac tgtgtaacat a
//
LOCUS       KCPA01001919             686 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 211301tic ultra-conserved element locus
            uce-1948, sequence.
ACCESSION   KCPA01001919
VERSION     KCPA01001919.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 686)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 686)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..686
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="211301tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>686
                     /note="ultra-conserved element locus uce-1948"
BASE COUNT          192 a          133 c          161 g          200 t
ORIGIN      
        1 ttatatgcat cagtttaagt ttggatggca actagggtta ttacaggatg aaaggtatga
       61 tatacatgaa agctgctttt gtggttatat tataaaatac tacatttcta tcacacaatg
      121 taccactgct ttatttacag tgcttcacta caaccatatt ttactatcat gagacattcc
      181 ttgaccaaaa atgttgtttc taatcacaga gtaaattaat aagattgaca gtctaaatta
      241 aactaattta gtcaaatatg tgctaccata actaggccat agcagtgtgt gctgccatgc
      301 aagagactag ggtttaattc ttggattctg cttctcactc catgagcagg agctaggagc
      361 actccagagc tgcagcctca accctgggag ggatggagcc ttgtgtcatt caacagcagt
      421 gacccccact ggccaattta aggagaagca ttgaggggct ctaaaaggag tcacttccag
      481 tcctcctcag aggttggtgg tcattgcacg ggatctagtg agtggaggtt caatggggtg
      541 cacttggtgg ggtcttcagc tttcagtctg aggagcagaa tcctctgggg aggaaacagc
      601 atgtgcgctt cctgagacac tatttttgcc tgatgtaact ataagtggca agattgtcaa
      661 gacagatgtc ctgtgacgaa tgctgt
//
LOCUS       KCPA01001920             640 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 211411tic ultra-conserved element locus
            uce-5998, sequence.
ACCESSION   KCPA01001920
VERSION     KCPA01001920.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 640)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 640)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..640
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="211411tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>640
                     /note="ultra-conserved element locus uce-5998"
BASE COUNT          205 a          108 c          133 g          194 t
ORIGIN      
        1 aagcaggaga atgctcctga gatgtgacag acctgcttct gaagggagct gcccaagagc
       61 tacgtgtatc ggccttttgt catcctgcca ggattggact gtaccatgct gcaaagtcag
      121 gaaaatcagc caggaacacg ggcaaggaga gcccacttgc tccttttagc tttatattgc
      181 aattctgcta aatgtaaatt cttcccaaaa ctgttttaag attaatgtag aacaaaatga
      241 ggaagcagga gtggtttggt gacattattt tgacatgatt ggctgaggat tatgatgtaa
      301 taggttacag tgcagcccct tataggtttt aaaatgaatt ccaagacacc attacaaaga
      361 cagcctgact cttttcttgt atctgagctt actcagtgaa actcatacaa atgtacaata
      421 ctgtttggaa tatggaagaa ctggatatag aatatcctaa gacagatata aattgtggca
      481 cagacttgat gttttacata gaaatggatc caccaggtaa aattgcttat agaagacaat
      541 tttggtcttt acaatagctg ctgaaaaatt cttactggat atgtaggatt tctttacttt
      601 gttattgata caaatggttt tctcataaat tagaataaaa
//
LOCUS       KCPA01001921             403 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 211516tic ultra-conserved element locus
            uce-4485, sequence.
ACCESSION   KCPA01001921
VERSION     KCPA01001921.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 403)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 403)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="211516tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>403
                     /note="ultra-conserved element locus uce-4485"
BASE COUNT          142 a           56 c           75 g          130 t
ORIGIN      
        1 tagaataaca gcataaaaaa atctttacta tgagcagtat tctttttctt caaataatct
       61 aattgattgt tcattgggct cagtcagcca aaagtggagg gaaactttgt acagacatca
      121 ttagtttttc tccatttaaa gattaatcat gaagagctct ggctctttaa ttctgtaatt
      181 tgtatattta atgggctgct gcagaatcta tgacagtaat tagcatagcc tgaaaactca
      241 ttaatacgca acaacatgat taatgcagca ttaatgcaaa catgactgaa gttatttggg
      301 ttatgtagta agaagattaa agctaaaatg tcctgtttgt tttaccagta gtgggtataa
      361 tggggtagca agcaaaataa gaaaaaacag gtatcaagtt agt
//
LOCUS       KCPA01001922             706 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 211627tic ultra-conserved element locus
            uce-868, sequence.
ACCESSION   KCPA01001922
VERSION     KCPA01001922.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 706)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 706)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..706
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="211627tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>706
                     /note="ultra-conserved element locus uce-868"
BASE COUNT          212 a          131 c          119 g          244 t
ORIGIN      
        1 tttttgtttc ctctccagaa acatctaaga aatgttcgga ttgttgctgc ctaaaaaatg
       61 ttaataaatg ccagcaattt agcctgacaa taacatggat tgaccaaatt gattaaattg
      121 attaaatttc atatatttac aatatgtaga cacaagccta atttattttc tgaggagttc
      181 aaggtaggtg tcactgggca aaacaaaaca atggagtaat gtttgtggtt gctatctgca
      241 ataatctaat gctgacagag agcagtattt tatttagtaa ttaacagtgt aaagggaaga
      301 gaagctgtca tgttggttct taagctgggg aatgtgatga aagatgatat ctgcgatctc
      361 atcctttcca cttgtttagg attgtcagaa tgagaaatgt cagcattatg aaagctcagc
      421 tctgctcttg atatgataaa acccttcaaa agccagtctt tctttccctc cttcctccct
      481 ctcctgcttg cacttgcttt tttatttatc ctgttttgtt agatggcaga aatataattc
      541 ttttctttct tcctattata agccaccatt tttgttttat tatatgtttc acaaccccta
      601 atgccccact gaaaattacc ttgttaaatg acagtgtttc aaagccatga atcctttcca
      661 ccattccctc agaggtttga aacagtcaac agactgtaaa gaataa
//
LOCUS       KCPA01001923             591 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 211740tic ultra-conserved element locus
            uce-1390, sequence.
ACCESSION   KCPA01001923
VERSION     KCPA01001923.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 591)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 591)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="211740tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>591
                     /note="ultra-conserved element locus uce-1390"
BASE COUNT          197 a          116 c          109 g          169 t
ORIGIN      
        1 tttcttgtgg cagctgaaaa gcctactata caaatcctga atattttata gaaaataaaa
       61 tgatatttat ttttaagtgc attctacctt caacacaact gcatcctcac aacaaatcta
      121 ttgcgttgtc ctgacatagt tactgcaaag gtttttcctt tgctgtccca agggcccaat
      181 tgatttatct gccagaagcc caaagcccca aaataagatc gctttgagtt tacagaggtc
      241 atttttcatt gtctaaataa aaatttctaa acaaaaatct ctcatcctgt taaccgcagg
      301 gtccttatct ccccagaggc tacagaaacc tgagagaagc catttcaatt cttttatgaa
      361 gaaagataaa agcaagtttt cgattagaaa gccaaggaaa ggcttcttat taaatggtgg
      421 taacagtaac tagtcgaaaa ggcaaaactg ttcaaggaag ggaaagaggg aaatcattat
      481 gcatggagca aacgctatac atgaggctgc caaggcaatc tgaggcagtg acattcggga
      541 agggaagttc acaagccttt gtaactagtt atagttcatt cccatctatt t
//
LOCUS       KCPA01001924             622 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 211847tic ultra-conserved element locus
            uce-5759, sequence.
ACCESSION   KCPA01001924
VERSION     KCPA01001924.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 622)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 622)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="211847tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>622
                     /note="ultra-conserved element locus uce-5759"
BASE COUNT          175 a          131 c          128 g          188 t
ORIGIN      
        1 tgactgagca tctgagaggt tttctgcctt gagactttgg acgatgcgtt tccagagcga
       61 aaggacaaga gttgactccg tattaatgct ggacttcaaa tgttttgact ataaaactga
      121 aacaccatta cctattccct gcagagctcc acttccctct ctctccttgc cttctcctct
      181 ccacactgta gccttttgta tgtctcaggc attaatccct cgctgccggg ttgtgtaaat
      241 taaagaataa tagagctgca gaggcataag ctcgcaatga tggggaatgt gtttgtatgc
      301 taagaagcaa tttcagtgaa aattaactca atttcatctg aaatagtgaa gaccggcata
      361 agctggcaga tccccgagga tggtaaaatt actttgtcaa agctctgctt gcttaaatta
      421 accaagcaag cactccaggt tattggcaag atgcagctag taactaggtt ttaataaaca
      481 aaaatagctt tttggataaa taagaaaagt gcaaagcatc ttatgtattc tgctgatgtg
      541 ttcatctgtg tgtcctcagc agcaagacct ttacattcct tcaagagctt tttggctggt
      601 ctgtcttcag agcctttgca aa
//
LOCUS       KCPA01001925             652 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 211956tic ultra-conserved element locus
            uce-53, sequence.
ACCESSION   KCPA01001925
VERSION     KCPA01001925.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 652)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 652)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..652
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="211956tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>652
                     /note="ultra-conserved element locus uce-53"
BASE COUNT          194 a          131 c          102 g          225 t
ORIGIN      
        1 tttttttcta ttaaccttgg agttgatatg ctgaaagcac catgtttgag gtggaaaatg
       61 ccaagcatct tttgaggcca ggaaatccac attttaatac atcaattcaa gtacaggcaa
      121 gattgttatt attattattc tccttctcca attccatttt agttagctgc cttttaattg
      181 catgtatcag caaacactga ataatgattt tatctatatt ctaaatttag agcagttaaa
      241 tgcaaagcaa aatgcagaca ctttcttgtg tcttaattga atgaaggtca cagctataac
      301 aatatttaat tgagctattt ttcattatca tattttaatg actttgcgct gacagttcgc
      361 ctgcttctga ggaaagagca tgatgaagtc gtttatttcc ctatttagtt attgtttgac
      421 aacatcatct tcgattaaga ctctgcttta tagcacatta atcatatttg aatgagcgag
      481 gggtataaat gtaaacatat ctcccatcct tggtgtttcc ccatgtccct gcatgaaagc
      541 aggctaaaca aatgcttgca tctattgtct gtttgcataa tagccaacaa caaggctaaa
      601 caccagtcct cagcaatcta attgtcacca cccctatctc acccttgcac ct
//
LOCUS       KCPA01001926             552 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 212069tic ultra-conserved element locus
            uce-7806, sequence.
ACCESSION   KCPA01001926
VERSION     KCPA01001926.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 552)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 552)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="212069tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>552
                     /note="ultra-conserved element locus uce-7806"
BASE COUNT          135 a          130 c          108 g          179 t
ORIGIN      
        1 tccctctcat catgggaggc aaagaagaca ggaaacaact tcagaggatt gagtcaaaca
       61 tttctgagat gagtggcagt gtgacacaga caggtaaaga ttaatgactc catcaattca
      121 cccctcaaag cttttctccc tgtatcctcc attctgccaa gatccccacc cttttcgttc
      181 cctccatctc cactttatgt ggtgacttca tttatctgct ctgagaatct gttcacattt
      241 gcaaatgaag ccgccgtcat ttcggtttaa tttgaaattg cttgtttact gtcggcacgg
      301 cctcaattaa ttatgttttt acggaaaggc tcccaacctc agaatattaa taaggggaat
      361 aaaatgacag cctttcggag ggctgtaaag ttcattttta atttctgctt ctctgatgtt
      421 ttcaggggca ttttggtggt ttctccctac cttccatctg aaaatccaag gaagggtcgg
      481 gagagtctgt aattactgtg cctctctgac cttagccacc ttctgtgtta ttgactctat
      541 aggctgtctt ct
//
LOCUS       KCPA01001927             592 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 212180tic ultra-conserved element locus
            uce-3440, sequence.
ACCESSION   KCPA01001927
VERSION     KCPA01001927.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 592)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 592)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..592
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="212180tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>592
                     /note="ultra-conserved element locus uce-3440"
BASE COUNT          164 a          104 c          134 g          190 t
ORIGIN      
        1 ttgctgtgat tcattttcag tgcatttttc ctaatggaag tagactgcat aaaagaatgg
       61 caaagctaat ctactgtaac aaactttgga tccagcttct ctgaagtggc tggttacatt
      121 ctaatttctg tgttgtgttc tagcttatag accagttaaa acctggcgga agattgatat
      181 taccagttgg ccctgctggg ggaaaccaga tgctcgaaca gtatgacaaa ctagaagatg
      241 gcagtgtcaa aatgaagcct ctgatgggag tgatatatgt gcctttaaca gataaagaga
      301 agcagtggtc caggtggaag tgattttctg ttccacttac ttcttccaca cacatgcaag
      361 gtgaaagggt gtgaatttta agcagataga ctgcaaggcc tgcctttgct gctgtcattg
      421 ctttctgctc ctccatacca tgaaaagtga ctcagtctgc attactacat cacccaaagg
      481 aggttatgct aagtttgagt taaaagaaga agaaaaatat tgcatgggtt gcactttgtc
      541 ggacatgttt tctttagtct ttgatgtttt gaagattctt atttgttgtt tt
//
LOCUS       KCPA01001928             531 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 212292tic ultra-conserved element locus
            uce-1128, sequence.
ACCESSION   KCPA01001928
VERSION     KCPA01001928.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 531)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 531)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="212292tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>531
                     /note="ultra-conserved element locus uce-1128"
BASE COUNT          154 a          103 c          128 g          146 t
ORIGIN      
        1 taattgtgtg aatgcaagtt ttgaatccaa tttcaggtta cacaatacag cagaatggga
       61 tgcaattgaa aaggctgcga gggaaggatg agaacacatc ctttcttcta gccatgacta
      121 ttttgttgtg tctgttatct aaccctgtaa ttaggacggc attcagaaaa tgcgaacaaa
      181 gttggtattc ttttcataac ccccaaatct ttgcattgct gcatgaaact tttggcttca
      241 gcttttccct gttcattaac catgccaaaa tttttaatct aacaccactg ttaaagagtg
      301 gcaggcttcc agggaaatat atcagccagg cttattaatt tcatgccaag tgctggaggc
      361 gtgaatgtag agaacgctgt ttgagtttgg ataataggaa tcaggcagct taaaggcagg
      421 ggataaagat caggagcccc gtgtctcaag aggaggagca ggtgcaggct gcaagcaagg
      481 ccttcaggcc caaaggggca gccagtgctt aaaacaatct gtggtgcctt t
//
LOCUS       KCPA01001929             780 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 212404tic ultra-conserved element locus
            uce-3826, sequence.
ACCESSION   KCPA01001929
VERSION     KCPA01001929.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 780)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 780)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..780
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="212404tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>780
                     /note="ultra-conserved element locus uce-3826"
BASE COUNT          231 a          149 c          142 g          258 t
ORIGIN      
        1 aaaacagcta ataaaggctc tgttcaaagc tgtctatttc ttagtggggg ggaaagatgt
       61 tattctgaca tcattgctct gaatgagcag cctgtggttc atacagtata cgctcccctg
      121 gaatgacaaa ttttctgcct ttttcttggg gggaatgttc aggcaaaagg aaaaaatgca
      181 taagagaagc aaagaaaatt catttgtata agctggcccc cctactgtgg aattttcaat
      241 tatatatatc taattatggc tgtcagttga tgaattgaga aaagacattt tttgtccccc
      301 ctcctttttt tgtctcttcg tcatctcttc tgttagaatg attatagcac acttacacaa
      361 ctaattgcct tactgcttat tagtgataca attatgcagg ccagactcct tgtgtgaaca
      421 accatctgca gagaaaaaaa aagtgacact attcaaaact atccataatt taaccaatgt
      481 tattccaatg cactgagctc agacaattgt tgggccttca tatttcatac ccaccctgga
      541 aaaagagggt tgtgggtttt tttctttttt cctctctttc tctctttttc tctgtgcact
      601 gattcacctc tttagactca ctgtgaattg gaaagaaaga aaaaaaaaag tgcttcatat
      661 gtcaacaaaa aggagggaag tgaagcatgg ctaatgccca ttcctcctgt gggcaatttt
      721 tcttcaaatt ttaaactaat aggcattttt ttcttcttta gaagcagttg agaaagtgta
//
LOCUS       KCPA01001930             489 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 212509tic ultra-conserved element locus
            uce-5235, sequence.
ACCESSION   KCPA01001930
VERSION     KCPA01001930.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 489)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 489)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="212509tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>489
                     /note="ultra-conserved element locus uce-5235"
BASE COUNT          154 a           82 c           94 g          159 t
ORIGIN      
        1 ctgtgctcag tgagcgtaac acacaataaa ttcagcaaca aagaaatgag attgctccat
       61 tgtactgcct gctcacagga aattataggt aaagagaagt gacagtcaag ggttaaatta
      121 cgaaattttg caatttattg ctcatcattt atgagattgt taaatgtcag aaagtggact
      181 tctttttcac tatcagtata aaactgaaca tactgtgaga cataaggtag caggtgtctt
      241 ggctctaaac tatcaagtct gtgggcattc tgttataaca ggtgctccaa aaatttgaac
      301 agattttaac aagagctgta tgggcttttt aattagcctg gttactcagc atgtggagaa
      361 agcactaggt atgtgcttaa aacaccattg tatcttgaaa acaaatgttt cacataccca
      421 tagtcactct tttggttgtt atcttaaaat tcctttctat ctgatgctag gatttgattc
      481 tggtattca
//
LOCUS       KCPA01001931             581 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 212620tic ultra-conserved element locus
            uce-1500, sequence.
ACCESSION   KCPA01001931
VERSION     KCPA01001931.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 581)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 581)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="212620tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>581
                     /note="ultra-conserved element locus uce-1500"
BASE COUNT          202 a           93 c          102 g          184 t
ORIGIN      
        1 gagccacata aagcttaatt tcagttgcaa attgcaagct ggaataagtt ccagaatagt
       61 aaacaattag ctgctttatt ttctttttaa taagactaaa ttaccagata atatctactg
      121 gcatcaactt ggctaataaa aatctgttta ataggatttg ccatttttcc agttgctatc
      181 atgatcagct ttgcattttg attatcttta aactttgcct caattttctc atagaaaagc
      241 tctcagtagt aattgcttta acatttattc caggtcaagt ggttaagtat gaataatgat
      301 gtgtcaaaaa tgtacagtag tgctgtcaat agagcaatta ccatttagct agagattatt
      361 atggcacaag agcacattaa ctggacacag taaacagaac aacaaagaaa gaaggggcaa
      421 agggaacaaa ctgatttcaa aagctgccag tgttatacag tgtgtattac tgccagatat
      481 tagttgttac ataagagcaa ttaagtctgc aatcagcttc acttcgcagc attggattag
      541 aatgtttcca attagaacaa gaagttagaa gcatgtttct a
//
LOCUS       KCPA01001932             710 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 212724tic ultra-conserved element locus
            uce-95, sequence.
ACCESSION   KCPA01001932
VERSION     KCPA01001932.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 710)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 710)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..710
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="212724tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>710
                     /note="ultra-conserved element locus uce-95"
BASE COUNT          227 a          132 c          166 g          185 t
ORIGIN      
        1 agattagaaa gtctcagagt gagtgacaaa ccctgtgtgg tatctgattt aggtttttaa
       61 caaaggtcag ggagaaataa tctccaaaga cagcagtgtc tcttactctt ttatttcacc
      121 cctttacagc taaaaaatgt acacgcacac acaaaaggaa acaacaacca aagaggaggg
      181 gaaaaaaagc ctgaaatttt agttacacca catgtggttt tcatttgtga aaaatgaaca
      241 agctgtttgt ggttaaactg tctaatctgc tgttatcaat ctagcactgc attcaagatt
      301 tacaggatac atcagcttct gtgccacatt agctgtaaaa gggagaggga gtgggaggaa
      361 aaaggaggag gagagagttt atcctgagga ataatatttc caatgcagcc acactcacac
      421 tacatctggt tgtgctggta gcggcagtta aattgaaata tttcacagcg tgtgtcagaa
      481 acatgcagaa tggtaattat gacagatctg attaagcctg agtgccacta gctccctggc
      541 cagctccggt tgtgcaggtg tgaccttgtg cgtgcctgcg tgtgtaaata aaattaatta
      601 caagcgagag ggcgaaggct tcggtgacat cacaaagcgg agaaactccc aagggggaga
      661 cctaatggaa tattttccct cagtctaata atacagttca tattgacttg
//
LOCUS       KCPA01001933             799 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 212833tic ultra-conserved element locus
            uce-1012, sequence.
ACCESSION   KCPA01001933
VERSION     KCPA01001933.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 799)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 799)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..799
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="212833tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>799
                     /note="ultra-conserved element locus uce-1012"
BASE COUNT          207 a          163 c          158 g          271 t
ORIGIN      
        1 ttttagtaaa aaaaggcttt taggcataac tatatggaga gatatataaa taatattaat
       61 ttccccattt acttctctag ctgtttttgc aagaatgaat gtggattaac attgttatcc
      121 tttcctaaca attatctttc gttactctag ctagtttagt tctaaaagac agacccattg
      181 acaagggaaa aaagggaacc ttctcagatt tttcagctca gcggtggtaa tgttgcactg
      241 aacactaatg agggaacccc cactgatttg cctgctttgt gacttttcta tttcataatt
      301 atttttaaaa cgcaaaacga catgaggtag cctagtcatg tctctacaac ttcctggtag
      361 ctcagttctt actgcagatg gcaatttgtt cttgtaacat atatgtctct ctgaccattt
      421 tcatctaatt tgtatgggtt ctaccatttc ctttctctct ttcagggacc ttgctgtgtg
      481 tgagctaggg ggtggcatga catgcttggc tgggctcatg gtaggtcttt tctcaattcc
      541 aatcccattc agaggaagaa acaaaaggaa aaatgttcca gtgcctccaa ctgctgggtc
      601 agagaactgt caacagcctc agctgcggtc aagctgcaga gtcttgagag accttctaga
      661 ttgacttgct ttcgtatcat attgatttta tggttgcctc gatgagcaga aacattttac
      721 ctcggtgtag tcaatatctt ttgttgtgac attccaggcc acgtacggtc tgtctttcat
      781 tgccatagcc gaagctttt
//
LOCUS       KCPA01001934             531 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 212935tic ultra-conserved element locus
            uce-5479, sequence.
ACCESSION   KCPA01001934
VERSION     KCPA01001934.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 531)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 531)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="212935tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>531
                     /note="ultra-conserved element locus uce-5479"
BASE COUNT          128 a           97 c          114 g          192 t
ORIGIN      
        1 tgcctccact ttatgtggca gtttttggaa actggaaaaa gcttccatac tactgtatga
       61 aaatacagtc tgatgattct gtctcatagg tgtcattttt ggtttggttt tttttttgga
      121 tgggagctgg aaatatctct atattcagca atgttgttgt tccagttcaa actgcaatcg
      181 agacttgtca agaggtgtaa aattgtttta agttttattt tattttgtac ttaatgtgat
      241 tacgtgcctt taaaatgttc tcccttccat tctgcccttg tatctttgca gtcattgtat
      301 acagcagatt ctagaaagtg ttaatcattg tcatctaaat ggcatagttc acagagacct
      361 gaaggtcagt atctggtgcc catcaattgg atataagaat ttcggggttt tctttccgct
      421 gggtaggggc agagggtggg atgtgttccc ttgcctaaca accggtccaa ccggttatgc
      481 atgatgcctc tttccagttt gcaagtctac aggcctaata tacatcatgg c
//
LOCUS       KCPA01001935             512 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 213043tic ultra-conserved element locus
            uce-3557, sequence.
ACCESSION   KCPA01001935
VERSION     KCPA01001935.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 512)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 512)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="213043tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>512
                     /note="ultra-conserved element locus uce-3557"
BASE COUNT          186 a           96 c           74 g          156 t
ORIGIN      
        1 cctccacaat gatgacagct ataaacttct tattccactc tttcatagat tttcaaaatg
       61 tgttgtcgat cctttctgca ataaaagaat gctgaggcgc catcacacaa aagcctgttt
      121 ttttccaaac agcaaatgtc tataaaaata cagtcctaca tctctgtgat agataagaaa
      181 tactaaagga gcaataataa ttaatggccg tacaagatga aactctagtt actcagacgg
      241 ctgtctccac ataatctgta ttttatacaa aaggagaaag agctcaatgg aatttcagct
      301 gtgaccggat aaaaactgcc aacaaaaagt gataaggaaa gtctaatgtg catattaatc
      361 atgtttatag cgcctcattt gctgatatat tagcctaaac tccctttcaa aatacatttt
      421 tgatcactag tagaatcatt taatacaatc aaactttaaa taggaccaat taatgcttcc
      481 atctactatt aattagaagt aattgattat ga
//
LOCUS       KCPA01001936             578 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 213146tic ultra-conserved element locus
            uce-6770, sequence.
ACCESSION   KCPA01001936
VERSION     KCPA01001936.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 578)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 578)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="213146tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>578
                     /note="ultra-conserved element locus uce-6770"
BASE COUNT          195 a          120 c           91 g          172 t
ORIGIN      
        1 agtcttcaac ataaataaca cactttaaaa actaccaata aagggaattt aaaagttagt
       61 tgttgattgt acaaagaaca agccaatgga ctttttgcct ccttgttttc ctcaggagtc
      121 cattaccttt cacaaagaaa attttagcta tcaaacttgt ccataaattt tgccgctgag
      181 tgtgaaacca tccagttagc atatacacta tcatttgcat atcttgaaaa cacagagtta
      241 gtgccatcga atcttgtgag tggaacgggg ctctcctcag gccagttcgg gtatgacatg
      301 cctaaaaatg aaaacagata attttttctg cactgaagaa ccataacttc atgtgcagac
      361 agtaaggccc ttggcaaaac tcccttcttt aagccagtcc actggatttt gtcccaaatc
      421 aattcatata aatgatccct gaagcagaaa ttcagatgca ggcaaaaacc ctggataaat
      481 taaagtgctt attcaattgc acatgtgcat aaaaaaaagc taagatttgt tcttctcatc
      541 caactttcca taacttttat tttaacaatc atgtagca
//
LOCUS       KCPA01001937             442 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 213245tic ultra-conserved element locus
            uce-2169, sequence.
ACCESSION   KCPA01001937
VERSION     KCPA01001937.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 442)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 442)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..442
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="213245tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>442
                     /note="ultra-conserved element locus uce-2169"
BASE COUNT          130 a          106 c          142 g           64 t
ORIGIN      
        1 ggagtgaaaa gtcaccagtc ccttcctact ggaaacagtc ccagaaaaag atctaaaagt
       61 taggagcaca acagagcagg gccctccagt gagcagcagc tcgtgtggga agcgagcccg
      121 agcacttgtt gccctgttcc tgaccccagg ttacaagaca gatccatgag catgagcagg
      181 agaacgagct gcgggaacag atgtcaggat ataagcggat gcggcgccag caccagaagc
      241 agctgatcgc cctggagaac aagttgaagg ccgagatgga cgagcaccgc ctcaagctgc
      301 agaaggaggt ggagacacac gccaacaact cgtccattga gctggagaag ctggccaaga
      361 agcaagtggc tgtgatggag aaggaggtga gtgcagggag ctgaggacag gagaaaggtc
      421 tccgggagtt gctgctcaaa cc
//
LOCUS       KCPA01001938             572 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 213353tic ultra-conserved element locus
            uce-2697, sequence.
ACCESSION   KCPA01001938
VERSION     KCPA01001938.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 572)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 572)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..572
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="213353tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>572
                     /note="ultra-conserved element locus uce-2697"
BASE COUNT          175 a          109 c          122 g          166 t
ORIGIN      
        1 tagacagtcc ccagggatct gcggtttgaa agtaaaatgg gtattgtctg tacctcttta
       61 ggctgttttc cagcatgttg ttgctgtaaa agttgaagct gcaactgttc ctgttgtttc
      121 ttataaaact cttgaagctg ctgctacaaa gaaaaggaaa gatggtaaag tggagagcca
      181 attcagtgtc ccttttggtg taacacacaa actgtgattt gaaaaatagc atccttttat
      241 ctgtaatggt ctgaccttta gtttgaaact caacaataaa ttcagtgcac actgactatt
      301 cttggcatta tcgtttgaaa agtaatctcc aaaatgaact gatgaaaaac ataccatttt
      361 ctacacaaac taattaaaat aaggcaagga atgacctttg attgtaacaa caaagccaaa
      421 atgcccttgc tgagggcgaa tctctgttgt gaaacacaca cgctttctaa atgatagggt
      481 ttgactgtat taagtgttgt tcaatacatg cacagacatc ctgggaaaca cttgtgctct
      541 gcgcaggcag cgctccgggg caggagggag cc
//
LOCUS       KCPA01001939             361 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 213449tic ultra-conserved element locus
            uce-5502, sequence.
ACCESSION   KCPA01001939
VERSION     KCPA01001939.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 361)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 361)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="213449tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>361
                     /note="ultra-conserved element locus uce-5502"
BASE COUNT           93 a           90 c           88 g           90 t
ORIGIN      
        1 gttcatgtcc tgaatgggcc aggcttgtta tcagcaaggc gtttacagcc cctgggctgt
       61 gcattaatta aaaaggcttt gtgctgaggc tcattcatta gcacactgct cctttaatca
      121 ctgcctcttc agccaccagg acaatctata aatctcctca aatatgaaat aatgaagtgg
      181 aatggttcaa tttattacaa tgtaataagg caggataatg tggggggtgg cactggagct
      241 gtctccttgc ccagtcttcc cacctcatta ctgacagcca ccatgagtga gaagggcagg
      301 agggacgcag gacagggtgg agaacgcacg ggacgcacat cttccatccc ctgccatccc
      361 t
//
LOCUS       KCPA01001940             766 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 213555tic ultra-conserved element locus
            uce-1408, sequence.
ACCESSION   KCPA01001940
VERSION     KCPA01001940.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 766)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 766)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..766
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="213555tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>766
                     /note="ultra-conserved element locus uce-1408"
BASE COUNT          223 a          128 c          171 g          244 t
ORIGIN      
        1 ttttagccgc gtggtgtgca tatcgtgtgc aagagggaga gagcaaatgc gtgtgtgtca
       61 tttacaaatg caaagataac agcaagttct tagttggcac caaatggggg accgttaagt
      121 atgagaaatg atgtcgattt atcattatat tatgcctctg acagcgaaac acacctgtac
      181 tttttatgta atttattgac tggttataga tgctgtgcga gagaggaaaa aattagcgca
      241 gctttaatta ctcatgctgc tggttaaaat attaatgggg cacagagtgt tgcatgctca
      301 tttctgttga tttttaatta gcagtaattc attttgcaca aagcatgttg atgcctttgc
      361 cggagacatt agcgaagtag ctgaataaag atgtttttga gagagctact gtgcatacag
      421 aataaagagt gcctgctttc tgtcttgtct gataaaagtt gggcaaagag ggagacagat
      481 gatgaaacca aacaatacca gagcatcatg gtatagcttt acattcctga ctttaacaaa
      541 tttggagttt tccagctgcc tggttctctg gaatatccaa gcacctcttt ttgattatta
      601 tttctgactg ttgtcaaaac cagccaggat gaatgaaggc agtttttgcc attaatgtca
      661 taaaaattct ttctcatggg aaaacacctt ctgatgtgtt ggttgggata agagtctccc
      721 ttcttgccct tatcaagaca tatctacatt ttgcagtgga aatgat
//
LOCUS       KCPA01001941             554 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 213662tic ultra-conserved element locus
            uce-6381, sequence.
ACCESSION   KCPA01001941
VERSION     KCPA01001941.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 554)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 554)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="213662tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>554
                     /note="ultra-conserved element locus uce-6381"
BASE COUNT          157 a           94 c          130 g          173 t
ORIGIN      
        1 aagttccatc aaaaacaaag tagttctttg gatggttcct cttttttttt tgtcccaaag
       61 atggcatctg agttttatct aaaccagaca gtttcttggc cctcattttt ccctaaaccc
      121 agcaatgaca aagagcaacg gctgcataaa ttggatgtaa gaagaacact tagggtttat
      181 cacagaagaa tcaaagattt catatcttct gacaaattgt ttgtactctt agggggtctt
      241 aagaggggtc aaatggcttc taagagttgc ttagctagat ggttaaggga ttgtattaga
      301 gaggcgtatg tagttaaggg taaagaggct cccagggttt gtaaagctca ttacactagg
      361 actatagctg cttcttgggc ggagaggtcg aaggcttcca cattggaaat ttgcaaggtg
      421 gccacctggg cttctcttca tactttttca ttgcattatt gcttggatgt agtctcttct
      481 gcagattctg cttttggtag gaggttgctt gtgaaccaaa aaaagaacag tgaagaaaag
      541 aaagacatgt agtt
//
LOCUS       KCPA01001942             386 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 213768tic ultra-conserved element locus
            uce-7491, sequence.
ACCESSION   KCPA01001942
VERSION     KCPA01001942.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 386)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 386)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="213768tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>386
                     /note="ultra-conserved element locus uce-7491"
BASE COUNT          104 a           98 c           76 g          108 t
ORIGIN      
        1 gccgcgctcc agcagccttt ccgctgggga tgcccacgtg gcaccgcagc gcccctcgca
       61 tggcatatgg tgtctggatt catacaagat gcaaaactat tctgccgcta atgcacaatg
      121 actcatagca ttgctaattt ttccaacaaa agcccacttc cacacccaca cttttaaccc
      181 ctcgggctaa aaagcctctt ctttagtttc aaagccatgg aaatgtaagg cttctggatc
      241 aatatctgaa accctatatt tatttaaagc atatgcatgc tctaacgctt attttaaatt
      301 tcagtgaaag caggtttgca aatcgccgct ctaacgtgcg gcagaaagtg gattcgttgt
      361 caaatgatgg gattaaattt ttcggt
//
LOCUS       KCPA01001943             528 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 213870tic ultra-conserved element locus
            uce-319, sequence.
ACCESSION   KCPA01001943
VERSION     KCPA01001943.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 528)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 528)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="213870tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>528
                     /note="ultra-conserved element locus uce-319"
BASE COUNT          145 a          122 c          109 g          152 t
ORIGIN      
        1 aatccacacc tgttcgacag ttcaatagaa gcctgctttt gatggaagca gactttcaag
       61 ctcatgcaca ggcacaggcc acacaccccc acacaaacgc ctgccccaat tcacgtttca
      121 gctggaggaa aaatagagtg tgagttgatc agaaaataat attgtgaggg cttgtgtttt
      181 gtggtcattg gaagattgct gatgggtgca taaataaagc atgctggaac atctgttctt
      241 tgttgtgcat tcagcttttt aatgtcttca aagagcagca ctgacgcatc actgactacc
      301 actccccatt caagcaacat tttaccagaa aataataaac cttcctggtg gggtgcaagg
      361 agccaaggca tttgggcaat gccattaatt tggaaatatc tctttttctg ggatttttaa
      421 atatctctcc ctttgaacgg tgttcaaatt ttgggatcca gcctggagtc cctatcagcc
      481 tgagcagtaa atcagcctga atattccact caagcctttc ccttctgt
//
LOCUS       KCPA01001944             733 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 213980tic ultra-conserved element locus
            uce-1027, sequence.
ACCESSION   KCPA01001944
VERSION     KCPA01001944.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 733)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 733)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..733
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="213980tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>733
                     /note="ultra-conserved element locus uce-1027"
BASE COUNT          216 a          137 c          123 g          257 t
ORIGIN      
        1 tttctactca accaatgagc tctaaggagg tttgaatctg atataggttg tactttctca
       61 agaaggctgc agaaaatagt tagaaaataa aatgcattcc cttgtcatct tgcttagcac
      121 caggagaatc taccacacgg gggcttgttc tccacaatgg tcagaccgag tgcgcagatc
      181 catgagcaat ttcctgttcc agcaactctg tgggacaaac ttgcagaaga agtttctaca
      241 caaagaagca ggtactcagg gtgggtgcag acttgatttt acaagtacat ctgttctgtt
      301 tatttttgct tctttgcagt gttatcaact tctgctccat atggatgatc catattgtgc
      361 cttggtgaaa tgataccaca ttatgctttt atgcttttat catcaaacac tactcatgaa
      421 aaaatcacca ggtttgccta ggttcatctg ttcaatttat tttcccaaaa ctttattttg
      481 aataaaacac ctacggtaaa tgtgatttat gtaaatgaat aaaacaaaac agttatataa
      541 gttttttgaa tcattcagat tctttctgtt gctgtgtatg aaatactcta ccaacatatt
      601 ttctttgggc tatttaattt ctgaagtctt tcagctaaat atatgtaata ataggacatg
      661 taccaaagct ttcattttta ttttatttcc attctctatg ccagtctttt cagacgaaga
      721 agctctaata ttt
//
LOCUS       KCPA01001945             756 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 214073tic ultra-conserved element locus
            uce-5629, sequence.
ACCESSION   KCPA01001945
VERSION     KCPA01001945.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 756)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 756)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..756
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="214073tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>756
                     /note="ultra-conserved element locus uce-5629"
BASE COUNT          226 a          142 c          140 g          248 t
ORIGIN      
        1 aggagccaat aattctgttt caattgatca gctttttagg cagtatcctt cggttgagac
       61 ttttcagata agtaaagtaa attaggttga aaacaaaatg ctggttcctg aaatgtggat
      121 ttcacaatgt atttttgatc tgataggagc gcagcagcat ttcttctatc cgctggaggc
      181 ccactgagct gcgcatactg tactctatca aagcccagtt ctttgcagct cagtgaataa
      241 aatactgcag tttctcccat tgactgactg aaataaaata atctatgatg catgaacaag
      301 tctaaatgaa ataataatat ccttagcagt gaaaaacgga ttggtaatac agtaattgag
      361 cagatttatt gccatctcct tgagctagcc tgctgaaaca gcctgctatt ttatttaatc
      421 tcatatcaga ggaattactg gctggtaatc cattgttaaa catcatttag aatgatggat
      481 gaaaatgtca gcttttccaa cataatcaat tcatatctca ttagcacata ttatttatga
      541 ttctcataat gggacctgca ggggtctcca gggggaaatg gagacctcag ctgttgttga
      601 aatgagatga gatatactgt agcttatgag ttaataactg catataaaaa atacttcccc
      661 acagtattga ttgtccttac cattttacaa atgaattgtc ttggcttccc ctcttgctgt
      721 gtacggcagc tcttccttct attcattttg ttactc
//
LOCUS       KCPA01001946             523 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 214175tic ultra-conserved element locus
            uce-5038, sequence.
ACCESSION   KCPA01001946
VERSION     KCPA01001946.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 523)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 523)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="214175tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>523
                     /note="ultra-conserved element locus uce-5038"
BASE COUNT          164 a           78 c          106 g          175 t
ORIGIN      
        1 ttttcacgtg cagatagcag ggatgtgtaa tgtaaaccat accaccaaat atattatgaa
       61 tatattgctc ttcttaaaaa tgcttgttgg tttttcatac tgcagtattg actaactgtc
      121 cgtgtttgat gtatggttta ccagcctgat gtagacttat ggttagagct taacttgtta
      181 gttctgcttt tgcagccaat tcagaataac tacagatgcc ccaagatatt aaaattgact
      241 gctcaaatgg actcagtgtg ggagtttcat tggttttaaa ttgataacag ctgaaagagt
      301 gaatgattaa agctgtatat gggcatagta tgcagctcct ttgtacgagc ccttgtgaac
      361 agaatccact gtatgggaat tgcctttgtt ctaataaaag atatttctga acaattgtta
      421 gtttaaattt ttaaatgatg aaacaagagc atttcaggag cctatagagg aaataattcc
      481 tgagaaactg gaataactct gagaagataa agtggatttc tat
//
LOCUS       KCPA01001947             801 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 214288tic ultra-conserved element locus
            uce-7558, sequence.
ACCESSION   KCPA01001947
VERSION     KCPA01001947.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 801)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 801)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..801
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="214288tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>801
                     /note="ultra-conserved element locus uce-7558"
BASE COUNT          215 a          186 c          140 g          260 t
ORIGIN      
        1 aaaaatcagg ctctgaagta tttgttaact ccattgatgt caaatgccct gattttcctt
       61 ggacagggat ctattgcttt aagtttatat tcaatataaa catcatatgc aataataaat
      121 cttaggtgca tatggtcaga cgatatgatt tataatttca tttagtgtaa tgcttttcat
      181 tccattcttg tatttctcat tcctctgtaa caaccttgta aaagtgacag ggaggctcag
      241 atctttgccc agcaaacaat atatattatt tgctacatga aagtggtgca caactctctt
      301 aaatgttccc tagcagactc ctattgcatt ccacaatgtg cctgcacttg aaccacctcc
      361 attcatatca gagtcttttt atcccagcac acattgagca agctgctctg aagcttaatt
      421 ctcctgaccc ttcagtgcag tcggatattg tcacctaatc cccccttctg tcccatgtgt
      481 ggttttgact tctttctctt ctcaattcct ttttcctctt ccctttttct ttctttctta
      541 ttctataagc ctctctccag gctccacatt ccagaattca tccttgcatt agggctgcaa
      601 tacaatgctc tcccagtgtt aaaggattag acattaagga gactgtggca actccagcct
      661 tactctgtgc acagggggaa cataaggggg agcgcccact aaagaggaag gaggctgaga
      721 gacaatctta gcaaaaccag agtggatgag gtttgtgtga ttaaaactgt ttaacactcc
      781 tcctggaaga cagtaaacca g
//
LOCUS       KCPA01001948             643 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 214396tic ultra-conserved element locus
            uce-2233, sequence.
ACCESSION   KCPA01001948
VERSION     KCPA01001948.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 643)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 643)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..643
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="214396tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>643
                     /note="ultra-conserved element locus uce-2233"
BASE COUNT          170 a          147 c          126 g          200 t
ORIGIN      
        1 tttcctgttg taggatcaaa ccctgccact atttttctca cttgagagaa aacagtagtc
       61 aattgagtac catttctact ctgcgtgagg ctcagtttac taacagtgag tttagttaac
      121 ttcatatttt ggacaagctt gtaaatttgt tctcttctaa tgctgtgatc ttatcaaggt
      181 tgtactgttt tcctttcccc catcttcttt ctttccgaag tgcagccttc tgatcaatgt
      241 gcacccattt ccctaaatac atcatgaaaa aggatgaggt ttccgcctta attgcttgtg
      301 ccttttattc acattcctct ctcagctaga attgtgaaaa gagtgttagt aaaaggctgc
      361 acaatagagc ttttcattag gcctcaacaa ggcacacaaa agaaggcttt tggaaagagt
      421 gcaggacttt aatttgcagg tggagagtag ataaaaggtg ctgacgcctc tattattctc
      481 ttacttaggt gacccctacc ctgttcagct gatcccaact accatggcag ctgctgccgc
      541 agcaacaccg ggcttaggcc cactccaact gcaggtaagt cccagcacaa tgcagaggag
      601 gcaaaggtta agtaaatatg aaaaccagtt ttctcttcct ttg
//
LOCUS       KCPA01001949             359 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 214498tic ultra-conserved element locus
            uce-3709, sequence.
ACCESSION   KCPA01001949
VERSION     KCPA01001949.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 359)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 359)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="214498tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>359
                     /note="ultra-conserved element locus uce-3709"
BASE COUNT          119 a           66 c           58 g          116 t
ORIGIN      
        1 agacgagagg acagttcaga gcactggatt aattccactt tctccctctc gctctctcat
       61 taggaaaata aaagagactt tgaaatatta agagagagtg ggattagagc cctctcctgc
      121 taccccagtc tttcctcccc tattaatttc cacttgatta gaattctttt tgaagtattt
      181 aaatatggac aataggaaaa agggagggtg aagttattga atatcagtta aactgtatta
      241 atataagctc agttccagct tttatataga tacttcatat atatgtatag ttttcactag
      301 gaataaagta gatctatccc tcctccccta cctaaagtaa ttatgattta aaaaaaact
//
LOCUS       KCPA01001950             632 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 214607tic ultra-conserved element locus
            uce-6, sequence.
ACCESSION   KCPA01001950
VERSION     KCPA01001950.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 632)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 632)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..632
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="214607tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>632
                     /note="ultra-conserved element locus uce-6"
BASE COUNT          202 a          106 c          106 g          218 t
ORIGIN      
        1 gtttcagcat ctttcaatta ttaggtagat tttaaggctc ttgtaagtgg tacaatagta
       61 gcgaatgcca gctgatattt tacagaaata ttaaaaatac catttgattg caagaacctc
      121 caggaacata tcttcatttt tggtagttta gtccacagta acaaaaacca cattgtacca
      181 atcagatatt taatgagcct ctaactccat ttctacctta tcccaaaggt atagcaaata
      241 gtgctgcttt cttaaaatat caagaaaaca tcatttgctc taaaatgtcc ctaaaagcag
      301 gtctaaattg ccaataaagg ctaggtaatt gtatcagcat ggatcagaaa gcatttctca
      361 gaactgatga aatagtttgc ggtattgcag aacctgaatg atgctctctg tacattacac
      421 tggaaatatc aaagactggt ctcagtttaa tttgctcact actgtgtatt ttggattttc
      481 aggaaatatt tcttgctaat gtcattctgt tttgcttcaa atgtaatttg tttggggaaa
      541 gtcagacggt ttctgcaatc aagggtttac ttggattttc gattaagaat gctattttta
      601 agaaaatttc atgttttaaa attctcaaat cc
//
LOCUS       KCPA01001951             388 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 214713tic ultra-conserved element locus
            uce-2593, sequence.
ACCESSION   KCPA01001951
VERSION     KCPA01001951.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 388)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 388)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="214713tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>388
                     /note="ultra-conserved element locus uce-2593"
BASE COUNT           93 a           72 c          113 g          110 t
ORIGIN      
        1 tggggtgcag attgccagct aatggggtgg agctactgcg agctctctcc attaatggag
       61 cagaatataa acagaataaa gccttcattt cctgggctgt gatttcatta ttaatatact
      121 ttacagttca caggttgttc atttgcttcc gtgttttctc agctggtgta atctgctgtg
      181 tggagtgaga agagtcataa aatttccatt tccagttgaa tgtgtgtcca attcgccgtg
      241 aaatgtttct ctctgtcgtg aatattaagt gcccgaggag tcggtggccc gcaggttccc
      301 agctctcagt gtcccagagg tgcaggagag aagtgggtgt gacaaggcaa agtgagggac
      361 tgagggaagg accatgtggc agagggag
//
LOCUS       KCPA01001952             571 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 214825tic ultra-conserved element locus
            uce-4839, sequence.
ACCESSION   KCPA01001952
VERSION     KCPA01001952.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 571)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 571)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..571
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="214825tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>571
                     /note="ultra-conserved element locus uce-4839"
BASE COUNT          185 a           87 c          119 g          180 t
ORIGIN      
        1 aaattaatcc taggttattg tgcaatgagg tgcaatttgt tcatttatat gaaccttatg
       61 tggattgaaa aaaatcaaga taaatcttca tgcacagcat acaatcagat tacccctgga
      121 ctatatattt acgttgggtc tgatagcaat caatggttta gcttcattgc atttcaagat
      181 gtatttgcac ccagtgtcca gtgatagtgt cctcaccctg gaaataattt agttgcaaat
      241 tgactggaag atggtgaaaa ttgaaagtta aaattagaaa tactcataat aaacagcaga
      301 aaaaaggtca gatgatgccg cactatgatg agattggaat ggttggtaaa tgaggttttg
      361 tgtttgtcgt gagatgtatg tgacatgcct acccaatgct cttgtaatat ccagcctagc
      421 agaagagatt atctggcaaa ttgacgctgg aaagaatttt ctgatggact gggaaattag
      481 aattgcactc ttttctttga tgtgtgcaag actgggccgc attacacagc tagctcaggc
      541 ataatattaa atatagtatt taatacttaa t
//
LOCUS       KCPA01001953             576 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 214932tic ultra-conserved element locus
            uce-5142, sequence.
ACCESSION   KCPA01001953
VERSION     KCPA01001953.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 576)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 576)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="214932tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>576
                     /note="ultra-conserved element locus uce-5142"
BASE COUNT          176 a          109 c          104 g          187 t
ORIGIN      
        1 ttcttgttct ctcttcttgt cacaggtttg ttttattttg tgcagcaata cattattaga
       61 acttaaaatt cacattcacc tgaagaaagc tgtgacatgc ctaccaaaag agacatacac
      121 tgcttaacct aaattgaccc ttttttcctt ctattctaat agatcttttt tctttttgtc
      181 actcaaaatg agtgtctgat gtatgagcat aaattgttaa aagcagtttt aggtaaagga
      241 agagagactg aagtggagtt ttctcacaaa agccaacctc aatttatgtc aaagagggtt
      301 aaaagacctt gggattaaag caataaactt gctgctgtca aagctaaaac ccgctaacaa
      361 tttagtgcca aacgcatgtt gttcaatatc atttcatatt atattatgtc acaagtaggt
      421 gacagttcca catcagactg acagggctga tttactctga agaattcatc gacattttgc
      481 agagtcaaag ctgacttcat tttgtttgga tgcaaggtgg gaaatctctc cctgagttgg
      541 actatttggc tgaaaaacct catggcacag agccct
//
LOCUS       KCPA01001954             471 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 215033tic ultra-conserved element locus
            uce-4833, sequence.
ACCESSION   KCPA01001954
VERSION     KCPA01001954.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 471)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 471)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="215033tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>471
                     /note="ultra-conserved element locus uce-4833"
BASE COUNT          176 a           69 c           76 g          150 t
ORIGIN      
        1 agaaattgca gatttactta caataaattg ctgaaacagt tttgcataaa cctgtaaatt
       61 aaacttaaaa gtgtgaagaa atcatatcgt caatttagat acacttttat ctcttcagaa
      121 agattaaaaa tgtaacacct ttggtttagc actgtgaagt ttgacaagca ttgaaacaaa
      181 aaaggaagtg taaattttac taatcaaaac atctgtacta tgcagccatt tacattttcc
      241 tatcaagaca tgagagaaat gttaatttta gacgactctt tttatgacct ataattactg
      301 tcattaagaa agctctggag acgtacaggg agctttgact gaaatacagt ttgacatgtt
      361 ctataattaa tgctgaatta acgtgctaca gtatgtgcct cagaagaaaa aggtttcttt
      421 ttactcaaag aaaagtgaaa gaaattgtat tacagtaatg cctgctaaca t
//
LOCUS       KCPA01001955             777 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 215138tic ultra-conserved element locus
            uce-497, sequence.
ACCESSION   KCPA01001955
VERSION     KCPA01001955.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 777)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 777)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..777
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="215138tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>777
                     /note="ultra-conserved element locus uce-497"
BASE COUNT          288 a          132 c          128 g          229 t
ORIGIN      
        1 cagccaaagg ccacacagat cctggcaatt cttgacttgg gcaaaaactt ttatttacat
       61 gttaattaaa aaaatacttg acaaaaaggc atacagtatt ttatactaaa agaataaaga
      121 tttttattaa gcactgtaag ttgcattcaa tagccttcaa agacaccaca ccacaatcca
      181 tctacaacca gccaaaccca acagtagttc attcttgcac aatccatgag ttggggcaga
      241 actcccttca acttacatta agatacctac ttagctctgg cgggcaggga atggggaatt
      301 acacctcatt tctgatcact aatgtgtgat gaagagcatc aggagaatta tatgaaaacg
      361 aatataaaga aatgattctg attttgaagt acattaagtt tggaaacact aacaaaaaca
      421 tcaaaatgat acaggtatat ttgcttatac taaattcttg atgggaaagt tctcaagaac
      481 aagccatttg tttcctgcta cagaaggggg gtactttttt tttgaagatc aaagcttttt
      541 ttttgttttt cacagaattt catatttgct aatatgaagg cataaaacag caacagagaa
      601 caataatgca tacagcaatg agtacaccag ggtaacgttg atattcaaaa cggctagata
      661 attttttttt taaagtttta gaataaatgc aacagaggtc aataatcaca aaattttaag
      721 gttagagcaa gatcagtcaa tgactaaaca tagttaacat cttttatagg actatta
//
LOCUS       KCPA01001956             663 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 215245tic ultra-conserved element locus
            uce-3330, sequence.
ACCESSION   KCPA01001956
VERSION     KCPA01001956.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 663)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 663)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..663
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="215245tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>663
                     /note="ultra-conserved element locus uce-3330"
BASE COUNT          231 a          115 c          107 g          210 t
ORIGIN      
        1 tacatgtgag actgctttta ctactaaaga aattcatgct tacgctaaat gattatttac
       61 attcacagtg catgtttttg catgacctac ctaattctta gctactttat ttatggactt
      121 taactggtga aataaatgat acaaaaaaag tatcagctta gaaaactgac aaatatgcag
      181 caaaagatta tggaaacatg cagtggtctt gctaaaatta acaacagtaa atagaaaaaa
      241 tgtaactgat gtattaccag tttgtgccat aaatttagca gcatcagctt gttcctgagg
      301 gacccttttc tcatgaacag atcgaggtcg ctgactttta attgtatgat ctcccatcat
      361 tccaaattct aaagacagaa taaaggttta tgaaagcttg tgtgtagaca tttctcaaaa
      421 gtcacatact gtctcatgca atatgttcct aaacatacct ggaagttgct ggcaagagtc
      481 agacaagtga tcatggcaat taacatcagc ttaactttgc tacactcagc tttcaataaa
      541 tgcttaaatt tatgtctgca gattttccaa tatgatttta ttttatgaac caacattcag
      601 tgtagtgata catactataa atcagctgta tgacatggga caaaaacaat tatacaaatg
      661 cag
//
LOCUS       KCPA01001957             760 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 215355tic ultra-conserved element locus
            uce-3436, sequence.
ACCESSION   KCPA01001957
VERSION     KCPA01001957.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 760)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 760)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..760
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="215355tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>760
                     /note="ultra-conserved element locus uce-3436"
BASE COUNT          230 a          131 c          162 g          237 t
ORIGIN      
        1 tctgtgggtt attaagagca gctcgtcagc ttagatctgt tagaaaaaga ctgtaagagt
       61 tgctgcaatg agataaagat ggattggcta cttttaagtc atatttcctt tcttgtgtaa
      121 attcagctgt gacttttatc attacttttg gagagccatc agggaggatg ttgtttttcg
      181 gtttgcattg ataccaatat agaggctctg ggatgctttg ggaatatcat gtcaccatgt
      241 ttgagtatgg gcactggaca atagcaagta ccaataactg ccctgtttga tcttctgcag
      301 ttctcagtct ttctaacagc aataatcagg cagaaggatg aaaagactga ttttcaggga
      361 attagcatga taagcaagaa cacaaaatca atcccaatcc ttgtgaggcc gcctctgatt
      421 gctttgaact gtcaaaaaat ggcagaatca aatcgaaagt gcttgaggtt acgggagtga
      481 tttgttcaag aagagatcgc tagagcaatt gacacagctc ttgagacaat aattgggtta
      541 tcaaagagaa aacagttcaa gtaccacagg ggtgaaggct tatttgcatt ggattttcat
      601 acagccaggc acacctcgat ttgaaagcct ccatttttat atacttgaag attaaaagga
      661 ctcaaaattg catcattatc atttggaact ttggttctta gcacattact ttttatttaa
      721 ccagcaaaac tttgaaaccc tgctttttat gaagtacgtt
//
LOCUS       KCPA01001958             654 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 215469tic ultra-conserved element locus
            uce-3547, sequence.
ACCESSION   KCPA01001958
VERSION     KCPA01001958.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 654)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 654)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..654
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="215469tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>654
                     /note="ultra-conserved element locus uce-3547"
BASE COUNT          208 a          137 c          124 g          185 t
ORIGIN      
        1 ggttttccaa atgctgggtt gaaaacaaac tcccatcaaa actgagtggc tctgtcaagt
       61 tcaaaaggtg aaataaatga atctttacac gttataagaa caaaatcaac attcttctgt
      121 ggcataaagt gcctgaaaaa ctagcaagta aaagcaggtg tgatgtgctc cctgtcagct
      181 aacgacactg ataagcttgc catgcctggt tctgcttcat ttcaaacaga ctgctgaaaa
      241 aaagggggaa aagccagagc agaaataatt gctggagctt cgagttagct gagagagcct
      301 gcaggctaag atcaacgcga ctgatttcat cctcttcctt ttatttctat aaccttaaac
      361 gttctgctat tataaaagtc atcatgtcag ctttccccca agccttagca gcggcctatt
      421 ttaaaattgt atcaattggt aaagctcctg gctggagtat tttcatcttg atttatggtt
      481 tctgagcttt aaagatgaag aaaactccac tgacctgatc cgagcgttca tgtgcattgt
      541 cccacacata tgtttataat cagaccctac agaaacaaca cataaagctt taaaattccg
      601 aaagcagcaa attgcaagtg aacactgttt atcctgtatt tgtctccgag aaaa
//
LOCUS       KCPA01001959             259 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 215570tic ultra-conserved element locus
            uce-6235, sequence.
ACCESSION   KCPA01001959
VERSION     KCPA01001959.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 259)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 259)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="215570tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>259
                     /note="ultra-conserved element locus uce-6235"
BASE COUNT           56 a           68 c           66 g           69 t
ORIGIN      
        1 ggtggtgggt cagtgccagg acaggtcctc ccagaagcat ttgggtgctg tcctgggtac
       61 ctcttgttct cctcctaaca tttttttctc ccatttcatt tctacaggcg agtttatacc
      121 gaggtggcta cagccgattt gccccctact gaagtgacgt gagccccctg caagtgggac
      181 agccccccca gttcatgagg cctggctatt gcaatattta ctagtagagg aactctatag
      241 caagtcgagg aggaaaaac
//
LOCUS       KCPA01001960             669 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 215679tic ultra-conserved element locus
            uce-5287, sequence.
ACCESSION   KCPA01001960
VERSION     KCPA01001960.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 669)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 669)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..669
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="215679tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>669
                     /note="ultra-conserved element locus uce-5287"
BASE COUNT          202 a          120 c          117 g          230 t
ORIGIN      
        1 aatttgccat tattctttgg ttattcttat atcacaaaat tgttcactgt gtttctggtc
       61 gataagcttt tctgatatga aatgatcttt cagaacagtg taccatttat gtttccagta
      121 ttaactaacc actcagagtg tgatcttttt gaaatcagag gattttctat tatacaggag
      181 tggaaatatt tagcttctct ctcccctctt agaaaacaaa ccacaaaaag aaatgtttta
      241 cacagaattt atacatgata agaaattcat tccacaagtg gagtaagacc tttaaaagac
      301 ctttatctac ctcacagaat aaatctgata tgccttagaa accattatgt gatctcttcc
      361 tctcattgca tgcagatgca actctctgct aacaccataa tttccattcc aatgatgaaa
      421 ttgggtgtgg aaggggagaa gtttattcta atgcacttgt atatgattac atattggctt
      481 gtaaaaatct aacatttttt gcttcttcta ataagctttt caaagcgtaa taaagctgag
      541 taccttaaag catctgtttg ctctggaaga tcagtcagta gggttgggca tcctgctggt
      601 ggggctgctg agactgttta aagagcctgg ttgacacttg cagtgcatat tacaaaagag
      661 ctattcttt
//
LOCUS       KCPA01001961             427 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 215785tic ultra-conserved element locus
            uce-1234, sequence.
ACCESSION   KCPA01001961
VERSION     KCPA01001961.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 427)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 427)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..427
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="215785tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>427
                     /note="ultra-conserved element locus uce-1234"
BASE COUNT          148 a           67 c           64 g          148 t
ORIGIN      
        1 tccaccactg cctgttttct tgttgagtaa taatgagata ccataataaa cagtagaaga
       61 tgtatgtcag atggttctcc aataacatta gcagctgatg tatgggatat tgaagacaga
      121 ttaagttgtt aatgtatatt agtatattct taatttcctt ttaattgaaa aagacatatt
      181 gactttaatt aaaaccattt cacaggaact gtcaattagc acatgtcaaa ctagttaatt
      241 cagaacagaa ttcttttaat tagggtctgc tttcctttaa ctgtggggcc aatgaaatca
      301 gccttttctt atcaagaatt taaatgtctc aaagaaatac aatacaaatc tctaaaaact
      361 cttatctatt attagaattc catatggata acattaaaat gatggttctg gcattgttca
      421 tgccaca
//
LOCUS       KCPA01001962             544 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 215895tic ultra-conserved element locus
            uce-5116, sequence.
ACCESSION   KCPA01001962
VERSION     KCPA01001962.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 544)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 544)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..544
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="215895tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>544
                     /note="ultra-conserved element locus uce-5116"
BASE COUNT          177 a          114 c          128 g          125 t
ORIGIN      
        1 tttcctgaag attataggga aaagcaaaaa atgggagcac tcctaaaggc tctacaaata
       61 aataacattg aagtcccacc actgcacatg ggaagcagaa gcaaatcaca tatggacaat
      121 tttcaggcaa aagttagtaa taacctgtaa gtgaaatagc aagcgagcag taaaaccttt
      181 ggacataaat ggagctccaa agtgagtctc agccttcagt agccaaaaat aaaccagttc
      241 ttggctgaaa gacataagtg ttattgtgaa attgatatcc ctccttggct tattcccaga
      301 caatatgttg cctttctggg ggctgatcaa tgtgattgat gtgatgtgcg aaatccagga
      361 gggagctccc ctttaatcaa acccactgtc ctccactgat aggcagctgt ggactaacat
      421 ggtcttctgt ctcgctctct ctggctcccc tcagaaatta gtacaggcgc atcaaaaagg
      481 acgagagggg agagagaaac gaactgcagc ataggacatg agagggcagc aatcgagcgg
      541 tgga
//
LOCUS       KCPA01001963             508 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 216005tic ultra-conserved element locus
            uce-4970, sequence.
ACCESSION   KCPA01001963
VERSION     KCPA01001963.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 508)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 508)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="216005tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>508
                     /note="ultra-conserved element locus uce-4970"
BASE COUNT          172 a           83 c           85 g          168 t
ORIGIN      
        1 tattcctgtg cacttctaaa acagagaaaa taagcagaaa ggtgaataaa tatggttaga
       61 attaaaggta gaattttatg tcatttatac aatggtcacc atctcttttt acccagcaag
      121 actatttaga taagggaata ttgtttggca ctagctccag tgttatttgt gataatgaac
      181 acaaacccca tctgtaatga caacatgatg tttctttctg tagaatttct ttcctacatt
      241 tgaatcaaac attgatgaaa gctctgctgc cagcagctgt tcagagacaa tttaattcca
      301 gctgtgataa ttcaccgtgt cagacattgg ctgttatatg ttgatacaac agttctccag
      361 atttgcattt ttatcaaaag gaacaaatgt tttgaacatt tcagtacaga tggcatttaa
      421 ccaagcacac aggttataaa tatttgaaaa gttaataact tattggtaag gtaaatcaga
      481 caaatgttat accatctttt ggtcataa
//
LOCUS       KCPA01001964             584 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 216115tic ultra-conserved element locus
            uce-4500, sequence.
ACCESSION   KCPA01001964
VERSION     KCPA01001964.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 584)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 584)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..584
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="216115tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>584
                     /note="ultra-conserved element locus uce-4500"
BASE COUNT          184 a           92 c          109 g          199 t
ORIGIN      
        1 gtgcagttgc tgttatgaaa agatatcctt gctgagttaa aatcagattg tcactgattt
       61 aaaaatctga tattgctgtc catcacacta aaccgtgata atggttcctg caaagttggt
      121 aatccttgtg cttatgcagt gttatgtagt aatgctcctg gccagcgtga gcacggagat
      181 ttggttatta tgtagaagag ttataataag aaatatgact gcaaaagcaa agcagtcagt
      241 tgaaattggt ctataattaa atgcttagaa aattctgtgc ttagctcatt tcaaaatcaa
      301 gtgcttcttt gtagcaattt cctttcttta attacaattt cctgtctagt ttgacattta
      361 caatgcaatc ttgggggaca tgtttgtgat ttattattct tgctcctatc aggatatcac
      421 tcggcagaaa tgagtttata aaataagagc tcaaattatt atggcctttg accaataaag
      481 ctggctcata atttcaggcc tgagaaaaga ttaacatttt tgacaatcaa atgcagaatt
      541 accaatgggg gacaattttg aaaactattt caattttctg aaac
//
LOCUS       KCPA01001965             846 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 216229tic ultra-conserved element locus
            uce-1110, sequence.
ACCESSION   KCPA01001965
VERSION     KCPA01001965.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 846)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 846)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..846
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="216229tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>846
                     /note="ultra-conserved element locus uce-1110"
BASE COUNT          294 a          146 c          141 g          265 t
ORIGIN      
        1 ttgctcaaca gtgtaaataa ttccgagtcc tttctgacat aaagtagtat atttaaagta
       61 aggtgtctta gtgagatttt cactttaaat agaataaggg ttaaatgata acttgactta
      121 tcttttaaat gacaaaaaat aaagaaattg caagaccttt tcacacatta gatatgtatt
      181 gtcatttatc atctagatat caggctagca gtgcgaagta ataaaacata tcatcgaaaa
      241 atgtgctata ggtctgaatc actctttcat tccacctccc agctaactgt agtattaaat
      301 caaacaagca gaacatttcc ttaggcagcc attgcctttt aatttcctga agaaccttaa
      361 aatatcattc attacaagta ctacacatat ttggttttta aaagtctcat aaatcaatag
      421 caggctgact gtaataatta ttacaagtta gtgcataatt ttcgtgctga aggctgcatg
      481 cagaacttta gcatatgcaa acgaggcaat tcaaactgtg tatagatatt aatatgaaga
      541 agcaggtaac gaggtgcagg ctatgaatta tgcatcaaga gcggctgatc ttcaatgagg
      601 aaaatgaatt cagcatgtaa tctaattagt gatggaagtc tattacatct aactgcaaaa
      661 gcaaccgtcc ttgaaacaaa tttatttaca gtccatgtta ccacttgaaa caactttgaa
      721 atgatgtgta agacaacagc ttaattgtaa aaattttttt gtttgtttgt ttcagttcta
      781 gacctggaag gcctcctaag aggactcaaa gtgtcacctc cccagagaat tctcatatca
      841 tgccac
//
LOCUS       KCPA01001966             580 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 216340tic ultra-conserved element locus
            uce-3596, sequence.
ACCESSION   KCPA01001966
VERSION     KCPA01001966.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 580)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 580)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="216340tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>580
                     /note="ultra-conserved element locus uce-3596"
BASE COUNT          177 a          116 c          122 g          165 t
ORIGIN      
        1 ctgtctgagt gctcacattt tgtgttgtaa aatcacacag cgtgtatccc gacaccaacc
       61 ccagcagcaa caacagaaaa accctgggac tcacaggaaa tgtatctatg ggaccaaaag
      121 atatctcagg atcccaggac cctgctttct gtagtcccag gttgcattcc ctagttaagc
      181 atcatcaata tcaatactta atggtattct ctaagctcag gcagtgaaga aaatagggtt
      241 gttatctatc aaagcacatt ttagtttttg acaagtaaaa agcagcatgg ggaatgcagt
      301 aagtctgaaa tgaaagccta aaagaaaact catataacat ctggtgtcat ttatcccctg
      361 ttggccttcc atagtgtgat acgatgagct tgttctgatt taagatcaga tgatctggtt
      421 tgaaagaggg gagtggggga tgcaggcagt ctggcagcaa attgggatac aaaatctgct
      481 caaataattg gaaacacgac agattttcct taactgatgc cagtggcatc ttagtttatc
      541 catctctctc agctgaattt gttaagtgca ttatcttatt
//
LOCUS       KCPA01001967             554 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 216553tic ultra-conserved element locus
            uce-300, sequence.
ACCESSION   KCPA01001967
VERSION     KCPA01001967.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 554)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 554)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="216553tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>554
                     /note="ultra-conserved element locus uce-300"
BASE COUNT          177 a          111 c          103 g          163 t
ORIGIN      
        1 atgatatgga agttagctgg aattcagaga caaatactaa acatatatct atctacctat
       61 taaaaaagaa gaaaaaaatg caatgaaaat ttatgacctt aacattcctt cagggtcaag
      121 caatttatca aattctctca ctttctggtt tcaattacac agctattgtg gaaggaactt
      181 attttagcag gttcatttgc ctcagtaggg aatacaggac tttggcctaa tgcttcacct
      241 ttagtgcagg ccatttgagc cttagaacaa ataccaatca tcactcttag ggaaaaaaaa
      301 aaataaaaaa atctgcattg gtatggccta ttggaatggg gtttctgtca aggtaaacgg
      361 ttgtcggcaa tgactgtggt agagtggcga taaatcccat tttattgctg aaaaattcca
      421 gcttctctcc atgcctgaca gctccccaca ttctcgtacc catttgggca atttctgtac
      481 tatgtccatc tggttcttat tacctctcaa cctgccagtg tctgatccag caggtcaaaa
      541 acaggggaaa gaaa
//
LOCUS       KCPA01001968             691 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 216662tic ultra-conserved element locus
            uce-2248, sequence.
ACCESSION   KCPA01001968
VERSION     KCPA01001968.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 691)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 691)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..691
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="216662tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>691
                     /note="ultra-conserved element locus uce-2248"
BASE COUNT          231 a          101 c          140 g          219 t
ORIGIN      
        1 aatccaagtg cggaagcagt aaaagatgaa ttgcacttat gaagtaattg acaaagggta
       61 tattgggcct tttaagcaat gatattgtgc atcttaatac aggaagaaag gatccctggt
      121 actgcagggt cattagttaa ttctcagaac tctgcacaag ataataatgg ctcaaggcta
      181 gaatgaacct gcctggatta gggtggagaa ccctaccgga gaaaacactt aatgtttgtg
      241 acttggtact atctttgtta ttttagatta attccctggc tattttcttt tcttttgaca
      301 gcaaagtcag agctgacaaa ccaaggcaga tctcaaggaa attcaattac tgaaatgtct
      361 gacagcttgc tttgctgctt ctaactaaag ttttgaaagt tacatgctgc atgtataata
      421 tggttttcac tacaaaggaa tagatttgca ttttctaggg ggaaaatcat tttcaagctg
      481 taggagttta atgataaaag ataaaaaatg aaatgctgaa gtttgtattt tgcaaagaaa
      541 tgaagtgagt tgagtggctg ccacatgaaa ctaggaaaat actgttttct taaaattcac
      601 tttaaatgag ggaatgccag tctacctgaa tagttcctgt gtatataatt ttctaattat
      661 tccatataat gcaagatgaa aatgtttata a
//
LOCUS       KCPA01001969             628 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 216772tic ultra-conserved element locus
            uce-7950, sequence.
ACCESSION   KCPA01001969
VERSION     KCPA01001969.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 628)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 628)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="216772tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>628
                     /note="ultra-conserved element locus uce-7950"
BASE COUNT          180 a           93 c          119 g          236 t
ORIGIN      
        1 tgctgttttc cataaatgac tgtgctttca gaggggagct gatgtagtta tactacagtt
       61 tgattgtgaa tatggaattt taaagcattt ttgcatctta atagtgcagt tgaaaaagaa
      121 taaatattag ttttgttgtt gcatgattgt tctaaagttg aaaagttaaa agaagagatt
      181 gtatttgttt gctttttttt ttttctccaa aagccttttg taaccatttt atgtattctg
      241 ttttataaca agtggataga ctttacagtt atgtgctgtg cggcctgtca atcagttcag
      301 tctgacagct gtcaatcact gacacgcaaa tattatggga ttccctagtg aggaaagcat
      361 tggtatctct gtgtggtgac tttagcctcc cgcagttccg gtactttaca tttttttagt
      421 ttttttcctt gtgaagtgat gagagttgta cctgcaatgt gttaactgcc aaaaaaagac
      481 ttctaaatac acctgaaatg ttttcagcct tattttcctt tgattttgaa agtgcttaaa
      541 acataaaaga aaatttaacc tgaagctttc tcagtctgaa aatctttact tagggagaat
      601 caactttaca gaaatcttta acgtaagg
//
LOCUS       KCPA01001970             241 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 216884tic ultra-conserved element locus
            uce-4600, sequence.
ACCESSION   KCPA01001970
VERSION     KCPA01001970.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 241)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 241)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..241
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="216884tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>241
                     /note="ultra-conserved element locus uce-4600"
BASE COUNT           49 a           67 c           53 g           72 t
ORIGIN      
        1 atagcggctt ggttgtggtt gatgatccac cctccgaaac caacgatttg cccttgctga
       61 ccaatatccc ggacccgctc ttgggtgact gcctccgtac ccaacttgtg gttctgtggt
      121 tgtttatgag gcccaaagaa gtgtttcaca caacccaaat tacaaattta actgttcccc
      181 tttccaggac ctgcctccat tggttttgca tcacatgact ggggtgatgt cgactttctg
      241 c
//
LOCUS       KCPA01001971             643 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 216991tic ultra-conserved element locus
            uce-5208, sequence.
ACCESSION   KCPA01001971
VERSION     KCPA01001971.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 643)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 643)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..643
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="216991tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>643
                     /note="ultra-conserved element locus uce-5208"
BASE COUNT          223 a           96 c          119 g          205 t
ORIGIN      
        1 cactgaagtt tgaaaatttg tgtcattatg aaaaatgaac tatagtgaca tattagaggt
       61 gcattttctc attgttttaa aggagaggag gcacctgagt cttacttaat gtttatttag
      121 atctaaaaat atattactag acttatctta ttgttttcga catgacaaag ttacataaga
      181 gaatcccctt gtacttaaag aaaaatgcaa ttattttcca ttctgaatct tcagactgct
      241 gttttagaaa atcatatctg attatttgct cagcagaaga ttattgagtt gatttagctg
      301 tgattttact taacaaagct tcaactgaat tcctactgtg gagtccaaaa aaggtagaga
      361 gatataaatg atacattcaa actgtgattt ttgtgaacag ggccatcaat gcacccctcg
      421 gagctaatag cggagatgag aaacagtggg tttgcactga aacaaaatgt actggggaga
      481 aacttgaccg caaatgatcc atcacaggta atctttacca gtaagctgaa aatgtctgta
      541 aatctaaatg tgattgcttg tgaattgtta cttaatgttt tcaaatatgc atatccatag
      601 gaaagctgaa tagctatgcc agtagaaaaa tgtcaaaaaa act
//
LOCUS       KCPA01001972             444 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 217104tic ultra-conserved element locus
            uce-6734, sequence.
ACCESSION   KCPA01001972
VERSION     KCPA01001972.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 444)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 444)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="217104tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>444
                     /note="ultra-conserved element locus uce-6734"
BASE COUNT           89 a          103 c          105 g          147 t
ORIGIN      
        1 gggtgtgaag ccccggcccc tcctccgcag ccccgggctc gcccgccctg ctcgggagtg
       61 tggtccctgc cgggagccgc cgcgcctggc gcacagaggg aagcgttgat gcatcgctgt
      121 ggaaattcat tgtgtgactt tctgggtatt tactgagttt cagaccgaga tgcagctctt
      181 gaaagcttta tgggcactag caggagcagc gatctgctgt tttcttatat ttgtcatcca
      241 ctcacagttt cttaaagaag gtaatcgtat gtgcatgtct acatatcctg ttctttaata
      301 ctaagatctt tacgaggtgc cttaattatt tttactgttt ccagtatgtt ctatttacag
      361 cagtgcttcc acgctatttt taaagccttc tcattttgtt gctttagata ataggtaggc
      421 ttatatttgc atttttgcta aatg
//
LOCUS       KCPA01001973             285 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 217211tic ultra-conserved element locus
            uce-4030, sequence.
ACCESSION   KCPA01001973
VERSION     KCPA01001973.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 285)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 285)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="217211tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>285
                     /note="ultra-conserved element locus uce-4030"
BASE COUNT           92 a           60 c           54 g           79 t
ORIGIN      
        1 aaaaagtgac ccaacagggt ccaggtcaca ggcatctgcc aacttaccca cctaaatgat
       61 aagtttacac attggttgaa agcaaatctg ttgttgctga ctgggatctg ttgttaatag
      121 gtatgacaaa gcagtaatag cgtcccagca ttttttgtat ttccacttca aacagcaaat
      181 ccgactgaat ttacctaata cttcaataat ccaattataa cactttacca gcagaaatca
      241 tcagcacata agccttggag tcagttaagt gagggctgtg ttgag
//
LOCUS       KCPA01001974             724 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 217320tic ultra-conserved element locus
            uce-7785, sequence.
ACCESSION   KCPA01001974
VERSION     KCPA01001974.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 724)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 724)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..724
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="217320tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>724
                     /note="ultra-conserved element locus uce-7785"
BASE COUNT          198 a          161 c          119 g          246 t
ORIGIN      
        1 caccagatct tttgcatttt gcatggtgct gtagctgaaa aacattcctt tgttaacgta
       61 acctcagtgc tgaagccctc agtttttctg tagctcaggc aacaaaccca gaacacacac
      121 tgatttacca tggttctaat cagcgtttcg cacatggaaa actcaccatg tgtttcagaa
      181 ccctttgaca ctcatctctt tctaatacaa gtgcctgttt ctccctctgc tggtttcaga
      241 ataaacgcct tgtcaaaaaa agaattagat tttgacagct tttttcctat ggttaattga
      301 ggtgatagat acacttgaca tttatctcgg cgcagaaaag aagattaaga catatttttc
      361 tccttgcatt ctctgtattg gaggtcactt tccagggtct ttttaatatg cctgtgcaat
      421 taatagtggt gataattccg ctccatatca caacctcttt aaagttctct ttcaaactga
      481 cagataaaac tctctcttct gtacacagga cttgaattag actaatcttt ttcgagtttg
      541 ccctgcaggc cttcctcaca gtcctgaaaa ttaatactgt ctgaaaaaca caaagggtac
      601 cgtgactcag ttcaaagaaa atgtcatatt tcagtttttt aattattccc actaaatttt
      661 tgagggcgtc cccctaaatt gtttcttttg aatgcgattt gaacgttcca cttgttaagt
      721 gtcc
//
LOCUS       KCPA01001975             725 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 217432tic ultra-conserved element locus
            uce-2270, sequence.
ACCESSION   KCPA01001975
VERSION     KCPA01001975.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 725)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 725)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..725
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="217432tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>725
                     /note="ultra-conserved element locus uce-2270"
BASE COUNT          214 a          158 c          193 g          160 t
ORIGIN      
        1 gaggacccag tgaagtctca gcaaagcacc gcggctggaa aaggcagagc tcttttccct
       61 gaaaggcatc aagcaaggca attaaccttt tttcccagaa acaagggaag tagaggaaat
      121 tgctcccttg ttcatgaggt attagttgac ttttggtaaa acagcttcta gtctcgttgc
      181 tgctctcatg ggaagaagag atacatggca gctgtgaaat tgaaattaaa aaaaagaaaa
      241 tacttacatg gcacagacag gcatgtacat gggacacaca cactgtgcat ttacctaatg
      301 atccatgaga agctgatgtc cccaggaacg tgttttctga ctggcttaag tgtccctggg
      361 gctgatggag gaaatgcgat gagaggctga ccggtggaga aggagaggcg gagtgaaagg
      421 aggcagagct tccaagggac ccggggatat ttacaggagc agaactttgc agcaaactcc
      481 cacctggaca aagaacacac agagaggatg gctatgtatg accatgaggt gtgggcacag
      541 ttcagagcag gaggtgtcag gttccctttc tcctccctga gcccctcggg attccctcca
      601 cttctcctga ggttaagaga agcactgaag ctgccatccc atgatccaca taggttaaga
      661 ccctccacaa ttgaatggat tactctttca gtggcaaaag gaacaaaagg ttttctgagc
      721 agagc
//
LOCUS       KCPA01001976             343 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 217536tic ultra-conserved element locus
            uce-3332, sequence.
ACCESSION   KCPA01001976
VERSION     KCPA01001976.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 343)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 343)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="217536tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>343
                     /note="ultra-conserved element locus uce-3332"
BASE COUNT          132 a           68 c           48 g           95 t
ORIGIN      
        1 aaccaggaag tagatgtgat gtttttcact ccacacataa cagaaccggt gccccacttt
       61 aaactagtta ctttaaacct tttggtccaa atacataaaa taagcagtat ttacagcatt
      121 ttattttgta aatgcaatgc tttaaaacac gttataaagc acctcagtaa aaatattcta
      181 cagataaaag tattgaagta gtaggaaaac cctagccata ccacagctca ctagtagagt
      241 cataatatgg attcaccaat acctcagttt acaattatta caaagaatcc atggagaaac
      301 ttacttatac cactgtgtaa ggatcaacta aaactgcaga caa
//
LOCUS       KCPA01001977             501 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 217644tic ultra-conserved element locus
            uce-1782, sequence.
ACCESSION   KCPA01001977
VERSION     KCPA01001977.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 501)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 501)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="217644tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>501
                     /note="ultra-conserved element locus uce-1782"
BASE COUNT          162 a           95 c           88 g          156 t
ORIGIN      
        1 aaaaaagttg aaaattaatc caaagctaaa tcagtggtat gattgtattc ctattacatt
       61 ccacttaaat gcatatgttt acaatatcct taataatatt aaacatagta aaatacttcc
      121 aaacttggct catggcatcg ttgtacttct agtggttatc tgaagccctg tcaatatgcc
      181 acttcctcct cccccatctt ttaacagaag cagcctccag tgaaataatc caagctgtgt
      241 tcaagaagtt ggcaagtggg tccaattaaa tgtggtttta gtgtattctg gcatttgcat
      301 atctagtttg ccaagaagta atgttttaga aaaaacccct gcgttggtcc agacagagag
      361 tggatggtgt gatgcatcaa tgaactttgt cccatgaatc acagtggttt aaataaataa
      421 ataaagtctc atctattgcc cctttttggc taacaggctt tacaataatc tgaatgtcct
      481 gtaaaagaaa acacacagag g
//
LOCUS       KCPA01001978             608 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 217756tic ultra-conserved element locus
            uce-6485, sequence.
ACCESSION   KCPA01001978
VERSION     KCPA01001978.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 608)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 608)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="217756tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>608
                     /note="ultra-conserved element locus uce-6485"
BASE COUNT          195 a          119 c           84 g          210 t
ORIGIN      
        1 tctaagtgaa ttatgattta ctggataaca gatacagaaa aaattcacta ccactaccta
       61 taaaactgca ttggtttttt atcaagcagc ttcagtttag cccatctagt tgatgaacat
      121 tcttctcaac tagcaaatat aaatgactta tggggataat atttcagtat atgatgacat
      181 tgctatacct cggattcttt taagatctgg gttattaaat attaaatatc aaagctgtaa
      241 attattgtag cagctttata caactaaatt aaattcaaac aaaacctaat ttccttaatc
      301 attgactgta atcctccagg aacatatgct attaactcag ctacaaatgg catagaaatt
      361 gtatgacttc aaattatttt atatcaaatt ctaatccagg gcagagtctt cagtaaatct
      421 cctgcaggga ttttaatgct tctgcaatca tactggctct ttactagaga gctaatcttt
      481 ttatactctg cactccttta tcaatttcct tcacaccctt actgagctat agctagtacc
      541 ttctatcacg tatcatactt ggaaagattt gggtttcccc tcctgcattt gatcagcaac
      601 agttaggc
//
LOCUS       KCPA01001979             571 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 217861tic ultra-conserved element locus
            uce-7682, sequence.
ACCESSION   KCPA01001979
VERSION     KCPA01001979.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 571)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 571)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..571
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="217861tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>571
                     /note="ultra-conserved element locus uce-7682"
BASE COUNT          186 a           87 c          108 g          190 t
ORIGIN      
        1 ataattaagc ccgggcaact aagaacacat aattaaagag cttttaagca atgttttaac
       61 ttgtgctaaa cagcagtatc atttctttct gctctgggcc gatttgtcaa agtactatta
      121 agaattttta gttataaaaa tggagtgaac ctttattttt cctcctctaa tttaatacgg
      181 ttgattacgc tgctggaatg ggaaggtagc tgctgtttgt agttaaataa ctcctcacaa
      241 tttcttaaag aaatgatctt caaagcttta atgggtcagt ggctcaagta caaaggaaag
      301 attgattttc atactcccac tctttgttcc caaagtttaa aacagacacg ttctggtaaa
      361 ttagtttgtc tgtgttatta atggaagaac ttattaaatt cccataaata catggtggta
      421 tcttacttaa aacacagaat gcatttgctt tgcatgttta aaagtaaaca ggggtgtaat
      481 attttcattt ggtttcagaa atgccttgaa aggcagaaag caggagaatt cagaatgtat
      541 taggtatgcc taatgatgaa tggcacagag a
//
LOCUS       KCPA01001980             510 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 217970tic ultra-conserved element locus
            uce-3354, sequence.
ACCESSION   KCPA01001980
VERSION     KCPA01001980.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 510)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 510)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="217970tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>510
                     /note="ultra-conserved element locus uce-3354"
BASE COUNT          179 a           91 c          107 g          133 t
ORIGIN      
        1 ttccaaggcg aatttattga cagcaattat tttaagccct tttataatgc caacaacatg
       61 aacacaggct cacatgagtg aaggtcactg aaagcagtca gtgtggacaa gcagacattt
      121 ctcgaaagta aattaaagag aaagaaacta ttttggttac ctttctcaca tttctttttg
      181 gaagctgacg aaggaggagg aatcataggt aatttcatca actcagcacg atttgactca
      241 ttcagtaggt agtgggactt ataggcatag gaactgaaca gggggtctga atggtcctgc
      301 actaccagcc ctatacgaaa caaacagaaa gagatgagtt gcaatgaaac tacccatgat
      361 tccatgaagg ataaacccaa tgaacacctc taatgcgtta tgtgggaatg aaagtttctg
      421 taacaaagaa gttgtgctgt agagaaaaat cttgcaatga acttctaagt ggaatttaaa
      481 ttgttctacc tttcaagcac aagaaaagca
//
LOCUS       KCPA01001981             574 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 218076tic ultra-conserved element locus
            uce-6254, sequence.
ACCESSION   KCPA01001981
VERSION     KCPA01001981.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 574)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 574)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..574
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="218076tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>574
                     /note="ultra-conserved element locus uce-6254"
BASE COUNT          177 a          122 c          106 g          169 t
ORIGIN      
        1 cctcatggat attgcccaaa ttattctcca caggaacaca attatggatt ttagatgcag
       61 aagttcatcc acagagaata taaaattttt gcacaatcaa aagaagatgc caattctcta
      121 ttagaaagaa acaattaaaa ctagataatg actctgaaca gctctgacct gctgagagcc
      181 tgaaggcttt gcttcactca ggactcttct gactgcaggt cagccctacg caaacaaagc
      241 cttaacagaa atgttacgga ggaaataata gccatttcca atgataatac acaattttag
      301 cacctacgct tggctgattt aggtggtcgg ctaacatgtc aaacagcctg ccttagttag
      361 gtgagccttt aatgggtaac tggcagactc tggcagcctt atttctgttt tagatttggt
      421 ttgtcattgg atatccatta cctgccattc atctttgatc tctttggaca ggcctgatca
      481 aaagatgtca tttgacctac tccacttggc agaaacttgt atgactctca taaagggggc
      541 accccagcta taaataaaat gacattatta tttt
//
LOCUS       KCPA01001982             284 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 218175tic ultra-conserved element locus
            uce-3355, sequence.
ACCESSION   KCPA01001982
VERSION     KCPA01001982.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 284)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 284)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="218175tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>284
                     /note="ultra-conserved element locus uce-3355"
BASE COUNT          109 a           41 c           48 g           86 t
ORIGIN      
        1 tttttttttt tcatttcagg aaaatgaatg ttagagccag ataagaaact atagtctgct
       61 ttcaagaagg ttacaagaaa actgcatctt gcattactaa tcctttatct ttcatgttaa
      121 caaaaagatt actgacatat ttttgaatga aagaaaataa aatagcaaac gcatctaaag
      181 aactgtgtaa ctttcatgca acacacaaat cggttgttaa acggggggag gagaatgaag
      241 ggaaaattca taatacattt ccctttgtaa agtgagcaaa tcaa
//
LOCUS       KCPA01001983             629 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 218283tic ultra-conserved element locus
            uce-1614, sequence.
ACCESSION   KCPA01001983
VERSION     KCPA01001983.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 629)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 629)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..629
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="218283tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>629
                     /note="ultra-conserved element locus uce-1614"
BASE COUNT          195 a          138 c          104 g          192 t
ORIGIN      
        1 gaaacttcag taaacgttct ctggggcaaa gctcactcaa tgtctcctgg taccaaacct
       61 tctgtgaatc aagcttttag atacttgcaa cactctggca tcaagacatt catacaactc
      121 tgaattattt attcatcaat ctttgtgcaa cttcctaaac accaatggag accaagatga
      181 tttcagctgt tttatgttac atcttctcaa gtggctgaag aggctataaa gcaccccatt
      241 gcttaagcct gccatctcag ttccattagc agtaaagacc tctctattca aactgctaag
      301 taaatcctcg gagagccggg gactgtttca tgcttgaaag caactgttaa gaatttgaca
      361 acaaccaaac tgttcctatt taatccttct cccaaggtaa aaagaattat aggtaaacat
      421 atgccttcat tatttgcttt gctgcatttc aatactcaat cccacacaaa attgccagcc
      481 aaggatttaa tgcaatctct tctgtatttc agagctattg cctttacaga atgggcttaa
      541 taagggctgt agagttggtt agcaaacaac tctattttct ataacacaca ctagagattt
      601 tgcagaggta actttaataa tgtaaggag
//
LOCUS       KCPA01001984             627 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 218395tic ultra-conserved element locus
            uce-3882, sequence.
ACCESSION   KCPA01001984
VERSION     KCPA01001984.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 627)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 627)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="218395tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>627
                     /note="ultra-conserved element locus uce-3882"
BASE COUNT          183 a          119 c          152 g          173 t
ORIGIN      
        1 caagaggaaa tattacacta gggtttaaac caggaaaggt cataggttat gtgttttcag
       61 tgagctgtaa ctgatggtct gatctgctta gaggtaggat taacctccct ctctctcaga
      121 aaggacttgc agagaattgt ttgcttgggt ttctaatctt attttacccc aaatgccatg
      181 tgcccttatt ggtggcttct tgtggtagtg gaatcagtga aaagctggta gatcacacaa
      241 gaagcctctg aatgaaggca gaattgaaac tgggaaataa agaaaacagc aggcaggtca
      301 ccctctcagg aaaacaacat tcattctcag tcatgcacat cctaacactt ttgacggcaa
      361 tttatcatgg aagactgggt tcaccgcaag ggctaacaca tgtcataggt taaatcagaa
      421 aaggcaatgt tgaaaggaaa cttcaaagtc cttaatacga tgtttattat aaagataagg
      481 gtaaacagca tgctggatga gttttggcaa aatgctgtgg gactgtttgg cagggcacca
      541 tttctgtgtc acaacctgca ggaagccagt tctggttgct gggaatctgt ctcctcatgg
      601 tatggctgga ggaagtcgcc ttttccc
//
LOCUS       KCPA01001985             459 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 218502tic ultra-conserved element locus
            uce-2457, sequence.
ACCESSION   KCPA01001985
VERSION     KCPA01001985.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 459)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 459)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="218502tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>459
                     /note="ultra-conserved element locus uce-2457"
BASE COUNT          146 a          100 c           89 g          124 t
ORIGIN      
        1 ccacggaagt ggattttcca atactctgta aaaccttagg aggccatgag ttaactgaag
       61 caagcagaac caaaccaaca acgaagcaag gaaggtacca tagctacttt cttgaaaaca
      121 aaaccaatct tttcattcct gccatttgtt agaattcttc ctccaggcaa gctggacagc
      181 tgcactagta ggttttttag tcatgggttg taagccccac ctggctagat ttgtttagca
      241 gacagctggc agaatgaaat taaaagaaca gggacataca aactgcttcc aaaacttttt
      301 ggatgctttc actgagttta tttggtatat gagattcttc ccttggtccc ccatctttct
      361 gcatccaaaa aaagccaaag cgagactgca ggctgcatta aacaaaaaag gacgggaaat
      421 gccccatctc agcctattta ttttgtagaa tatatgaat
//
LOCUS       KCPA01001986             713 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 218612tic ultra-conserved element locus
            uce-6196, sequence.
ACCESSION   KCPA01001986
VERSION     KCPA01001986.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 713)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 713)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..713
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="218612tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>713
                     /note="ultra-conserved element locus uce-6196"
BASE COUNT          252 a          123 c          114 g          224 t
ORIGIN      
        1 tttacacttt cagcaaaaat gtgaacagta tatttgaata tattaaaaag aattaaaaaa
       61 acatttcaca aaaaacattt gttgccatat gaaagtcttt cagcaataaa tgcccacacc
      121 agtatttaaa cattgttaaa agtataatga tttgtactaa taaattatgc aacaagagag
      181 gtaaacaaaa taaaattaca gtatagctct tcatgttcct ccaccgagca tccgcagctc
      241 tcggaagctc cattttagat gactaattaa gaaactgata ttttcagagc aacaaaaata
      301 aaagctttta tttgttcatt tgaatataaa acaggcgtta tcacagatgt acaaagcgta
      361 ctggtggttt aacatacaag aaggttgctg tcctttgcac ataaaaattt ttgtttgaat
      421 ctgtgattgg ctgagtttct ctaaccagtc accacactct atgaaataac gctgctaaca
      481 ttcaactgat aaaagggaca gtcttccctt gggtaaagtg tcaagcagga ttaaatatat
      541 ataataaaca agcaccatga ggaatctgct cctgtttgat tagttttgtg tttaaatgtt
      601 cattgtgtac cctcgtgcat gtgcatcgag ttgattacat ggttttgtct gactccaaaa
      661 gcacaaggtc acaagacaaa cattttatac attctcatga atggtttatc tac
//
LOCUS       KCPA01001987             540 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 218823tic ultra-conserved element locus
            uce-3835, sequence.
ACCESSION   KCPA01001987
VERSION     KCPA01001987.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 540)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 540)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="218823tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>540
                     /note="ultra-conserved element locus uce-3835"
BASE COUNT          183 a           99 c           93 g          165 t
ORIGIN      
        1 ttatttctaa aacatatctg ccgaaaagtc atgcctttca cattcagtgg gaaccatggg
       61 atttcactat ctcacagaag tgagcaatat gtatttcaat gtactttgca gcataataaa
      121 atactctact gaaattacaa gacctaaaac aattacttta ttgcttctta caacttttta
      181 aaattcaact ccaaggtagt aattggcagg gacaaaatta tgtagcaatt agggcatgac
      241 agcaaaagca aacaagaact gaaaatgggt tcgacacttc tggtaacaag caggtaatta
      301 tcacagcagc ttgaaagggg cataatcaac caaactgaca tcatccctcc cacataataa
      361 aatgtgaaat ccctttacgt gcagtgtagc tcttacacac agctggtaaa tgctgctagt
      421 ctagtctcag agcagctgag gttacatttg ggatggttca agagtggata attttattta
      481 tttatttaga aggtaatagc tattacctgt tttcgtccta cagatattat tttttttaaa
//
LOCUS       KCPA01001988             547 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 218929tic ultra-conserved element locus
            uce-3795, sequence.
ACCESSION   KCPA01001988
VERSION     KCPA01001988.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 547)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 547)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="218929tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>547
                     /note="ultra-conserved element locus uce-3795"
BASE COUNT          204 a           93 c          100 g          150 t
ORIGIN      
        1 ctactggtca tggagacccc gaggtcagtg tctgacatca aaatggggca gattaatttc
       61 tactgaaggg tgcttaagct taaaaatatc gaatatacct ctgacaagat aatttttaaa
      121 aggacttgtg ataaagaatt ttatctttct aaatgaagaa cagtctgtta tcttaaacat
      181 acacaatatt aagcgagact cttgttttac tttagactgg aaaaatatgc cagggacagt
      241 caaagtcaac acaaagtaac aaacagcaaa aggtagcaga gagagaaaca ggtaagtgca
      301 gctctggtca aatccatagc agttctttac gtcagttaac ggctcattta catcagagtt
      361 tctaatcagt tacatgcaag cccaaagaag cgtttgatca ctacacatgg taataaaatt
      421 tgattaaatt tatcaggcaa ctgctaaaat atgaaaattt gcagatgtaa taaagtagct
      481 ttatctgaac ttgaacagga cagacaaaag taaatcattc cgttggttaa aaaaacccta
      541 cattcag
//
LOCUS       KCPA01001989             454 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 219027tic ultra-conserved element locus
            uce-5405, sequence.
ACCESSION   KCPA01001989
VERSION     KCPA01001989.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 454)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 454)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="219027tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>454
                     /note="ultra-conserved element locus uce-5405"
BASE COUNT          114 a           83 c          107 g          150 t
ORIGIN      
        1 gaagcatcag tgcaagttca gtgggaggtg gagaatggat ctctgtgccc ccagatcact
       61 cgagtggatg gcaagaagct gctactgtac agggagcagt ttgggaagat actgcagcgc
      121 actctacact taacctgtaa gcagggttac attctgtctt gtaacctact gcaccatctt
      181 cttcgttctg ctacacttat ctaccccaca gagtactgca gtgtgccagg tggctttgac
      241 aagcctcttt ctgaatactt tcctatcaag gcaaggattt tcatttattt aggattagag
      301 gatttgactt ttatttggag atttctagtg ctggcagcaa gatgctttgg gctttgaaat
      361 atagagcaaa tgacaattaa tttaaagtat attgatagct agttttatag ttgacttact
      421 agtggtttgt gatgtgtgtt tttttccatg attg
//
LOCUS       KCPA01001990             625 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 219137tic ultra-conserved element locus
            uce-3188, sequence.
ACCESSION   KCPA01001990
VERSION     KCPA01001990.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 625)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 625)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..625
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="219137tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>625
                     /note="ultra-conserved element locus uce-3188"
BASE COUNT          189 a          134 c          120 g          182 t
ORIGIN      
        1 tctccagcct tttttcctgt ttgcagaggc aacagttgta tccattacca aggtcagtgg
       61 tttggagaaa atagcagcta ccagaaaccc actagaataa tatctccagc aggtgataga
      121 ttagttggaa caaattggaa ccattgcact tcagcaatcc tggtttcttt caagctgttt
      181 taaaaatgtc gtcattttaa tacacaatat cagccctgcg gaacagtcca cagcaggtta
      241 atttgaatca tatgatgtat cactgccctc agctgacatg agctccgttc catgtgtgaa
      301 gccataataa atccattccc aaccgaggca aattccctgt gagaaggtga actaatccag
      361 gcctcacact ggcatgttag ccctccgtaa ttgaaagcag ggccacctgt tcccagcaca
      421 gttagcctat agagagaaaa ttagcattag atcagatact taatatattg aaaaatcatt
      481 catactactt gcaagttcag ctgtgggctg cttagcatga catcatatat aaacctagga
      541 atgtgcccac ttgatcccag tttaacagtt ttgttaacca tggtgtttgt taactttgaa
      601 aggagaattt tttgatttaa tgaga
//
LOCUS       KCPA01001991             918 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 219250tic ultra-conserved element locus
            uce-1805, sequence.
ACCESSION   KCPA01001991
VERSION     KCPA01001991.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 918)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 918)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..918
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="219250tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>918
                     /note="ultra-conserved element locus uce-1805"
BASE COUNT          286 a          189 c          179 g          264 t
ORIGIN      
        1 agaaagcaag cactcagtta agcaatccat acctctacat tttctcttgc tcctttagct
       61 gaacagtttg cacagagcgc attaggtgcc cagcttgacc tgcaaccttc tctgaaatca
      121 ctcattattt cctggacata gctttgatgc aatcctcaca ggttttccca aaatgcatgt
      181 attacaatta ttcagtccag aggctgcaca tatccctgtg ctgtgtttcc tccagcagtg
      241 cttgaaaatg tgctattatt gaaagagtta aaaaaaatcc ccttggaaaa gctaattatt
      301 gcatgcagat acttctttgt gtgatcaagg aggggacaat ttaataggct ctgtaataca
      361 accaagaaca aaattgcttt aaaggaagtc tcttgttgag tgacaactct gttgcctgag
      421 ccaattaggt cccaataaag agtgttgaat tggctcctgc tttctcatta attatgttct
      481 gtcacagaca tggggcttga tttagcaatt ttgtattaca ttaagatact gaaaggaatg
      541 gaacaaatgg ctcactctga taataggcat tctatacacg gtgtgacatt tactatccag
      601 ctgtccataa ggcagcctag cacttcagtt caggggttta tttgtcattg cttcaaaggg
      661 acactcagct tttcacaaaa aagaaacaga gaggctaata gataggacaa aatgtactgc
      721 tgatatgctt tattagagat aggatgctag ggttttgcta acaagctcat ccgttgggac
      781 taagccgagt ttgctgtcaa tcatcctaca cacaaaagca cactagttaa caaggagaaa
      841 tgaattacag acacttattc ctgcctgtgg gatcacaaat acaccaatct gtgaaagagg
      901 cacaaactca gaagacaa
//
LOCUS       KCPA01001992             558 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 219357tic ultra-conserved element locus
            uce-6829, sequence.
ACCESSION   KCPA01001992
VERSION     KCPA01001992.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 558)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 558)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="219357tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>558
                     /note="ultra-conserved element locus uce-6829"
BASE COUNT          163 a          116 c           82 g          197 t
ORIGIN      
        1 attttatgtg accatttttc ctagcaaaga aagctgcttt ttatgttttg aattgaagca
       61 acacctctga tgttctgtct gaaattctat gactttccaa aaagacatgc tatggtcatc
      121 tgtgtcactt aactattgca tttacagtgt taccacaggc ccaggtaaca atcattgaat
      181 taactcaggc attcaatcct gacaagccac ggactattcg gcactttgaa attcatagat
      241 ttaacagcat agtgtcagat catttttcat aacccttgtt tccttgtcag catgtcatag
      301 ccagtaaaga gctgctagat tagtacaaat atataaatct tttttcagct tcacctcact
      361 gctgtttaat actactttac tacaccacta tgcttactag tttaaaatac cttctgtttg
      421 gagaaacgca tatttattat tattattctg caatttccct gagcacaggc tgacagctgc
      481 atagcacttt gtcatttatc attgtacaca agatctgtca acttgggaaa ctatttcaat
      541 tctgcatgaa attacttt
//
LOCUS       KCPA01001993             601 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 219574tic ultra-conserved element locus
            uce-7699, sequence.
ACCESSION   KCPA01001993
VERSION     KCPA01001993.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 601)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 601)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="219574tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>601
                     /note="ultra-conserved element locus uce-7699"
BASE COUNT          150 a          138 c          130 g          183 t
ORIGIN      
        1 tctcttttaa gggtgtaatt gctcaatgga aagagtagca gagacacagc tatgaaaggc
       61 tgctttggag tcctctaaac atctgctgct gctttgcaga tgagaaaaga cccacatctg
      121 cagcccctgt ttcagtgcag tgtgcttttt tatggctctg atagcagatt atggtgccac
      181 tgtcatgagc cgttgcagcc ccagtaagag tggacactgc gcatttcaat acctcatcca
      241 ctaatctttc ccccactgct cccattccct ggctgctaat ttcatgcagg cacttaaaca
      301 tgatggataa ttgtgttctg cttatcaatg tttaatttaa gggctgttcc gtctgacctg
      361 aatgccctct gcaagagctg tgcctcatta ttgatttcat ggtcatacct gtgacattac
      421 ctgctttgta ggaagtagac tttgacattc ctgtgaggct ttggcagcca gagctaattg
      481 tcagaagaat aatcgagtca gcaaaatcat tacaggtgat ctgtatgtta ccactgtttt
      541 atctgcctct aattaggtgc aggagaggta actcatcaca gtaagcacac cacactggtt
      601 t
//
LOCUS       KCPA01001994             589 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 219682tic ultra-conserved element locus
            uce-6414, sequence.
ACCESSION   KCPA01001994
VERSION     KCPA01001994.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 589)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 589)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="219682tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>589
                     /note="ultra-conserved element locus uce-6414"
BASE COUNT          168 a          116 c          112 g          193 t
ORIGIN      
        1 tagacatcat ataatttatc catatttgtg tcagtcctat agaattcctg caacagttta
       61 tgaactctga aatagaaaca tcggatcccc atctttcaca aatagcagaa aaggaggaga
      121 cagtgggaca atgatgacct tctggcaatt caaatgccac cagtgtctgt gtggcttcct
      181 gtgacagttc tgttaatctc tcttttagtc tcttcctcca cctcttacag gcttctgtct
      241 tcaatctcct ttccttcctt gctagttcat actgtaactg acgatgggtt ttcttctcga
      301 ctggcttcat ttttgctgtt cttccaggag aaaaatctat tacctgcatc gccgatacaa
      361 gttcatgaat aggtgagtac aaatctcatg cctttatggt cattgggacc caataacaaa
      421 aatgatagtt aaagtcaagc tggaaggaaa agtttatttg tagaaatggt gaagggagtg
      481 gttacatact tgcattttta aggcatctgc atgtgaaaga agcattttta ggaataagaa
      541 aattcttaaa agaactgtat ctccttcttt ccatgtaggt cattaggga
//
LOCUS       KCPA01001995             597 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 219792tic ultra-conserved element locus
            uce-747, sequence.
ACCESSION   KCPA01001995
VERSION     KCPA01001995.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 597)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 597)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..597
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="219792tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>597
                     /note="ultra-conserved element locus uce-747"
BASE COUNT          211 a          106 c           95 g          185 t
ORIGIN      
        1 aaaatcctgt gaccaggtac cagtaattca gatatttgta tatgcttcca caggcgtata
       61 ctggttttat tggtatgcat tcccttaata gtataatcta aatgcatttt acttgataag
      121 tttttatgca gatcttacaa cacatttttc taccacatgt tggaacattt gcgcaaaaaa
      181 aaatcccatc tttatgtttg aaatttatgg gaacacaatt aaaatgagag gggtccaaag
      241 gtatcaagat aattacattt ttctaatctt actaaacaag ataaattacc tgcaggccct
      301 cttataaaag atgaaatctt cataataagt gaattaatca agcagcagct tgctactgca
      361 catgcattta taacaggaat gattcaaaga cttattttat ggggaaatta atggaaacag
      421 gcttttcatt cttctgcacc aattgaaaac ctcagcaacc agctgcccac ttgtcaagaa
      481 aacagaaaga agctggaaac aaagataaat aaaaacacct ttttcctggc acttttgaag
      541 agaaaaagca gctctcattt acagcagcca tctgtttgtt atttaatatg ggtgaat
//
LOCUS       KCPA01001996             447 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 219901tic ultra-conserved element locus
            uce-2509, sequence.
ACCESSION   KCPA01001996
VERSION     KCPA01001996.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 447)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 447)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="219901tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>447
                     /note="ultra-conserved element locus uce-2509"
BASE COUNT          118 a           88 c           87 g          154 t
ORIGIN      
        1 cttgatttat tgtaaaacct cttgtccagc catggctgga caactgcttt ctttgtttct
       61 tgatacgaca ttctcgtaaa atattgcctg attttgggtt acattagcgt ttgatctatt
      121 cagttgcatt agcttgtttc tgttgtactt aagtcaaagg tgcccatagt ttagcgacag
      181 tttccaaagg ctttagtacc gcctgtatta caaaatgggg gacccaaact cccggaagaa
      241 acaagctctg aacagacttc gtgctcagct tagaaagaaa aaagaatctt tagctgacca
      301 gtttgacttc aagatgtaca ttgcctttgt gttcaaagac aaggtaactt ggttttaaat
      361 caagtgttct gtgcaaattg ctgcctggtt actccttaac atattgcatt gacagttgct
      421 aattgctata cgttcacgtt tgtcatt
//
LOCUS       KCPA01001997             721 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 220010tic ultra-conserved element locus
            uce-3638, sequence.
ACCESSION   KCPA01001997
VERSION     KCPA01001997.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 721)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 721)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="220010tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>721
                     /note="ultra-conserved element locus uce-3638"
BASE COUNT          207 a          144 c          124 g          246 t
ORIGIN      
        1 ctttctccat agttgtgctt tttgtaatag gacccagtgg ctctctcttc aaaattgact
       61 gtattccaca catctttgag gatttttggc accccttgtt catatgcaag ttcgggtcaa
      121 gcttttgagt ttcctaatca ctcagttctg gcatagtccc gttgccacta aagcctcttt
      181 tcatgcctat ttaatgtctc agaagtgctt tcaagtggtc tttgataaat catagtaagt
      241 gttattccag tcactcaata gcagtacctg ctggagtctt ttttagctcc caaggcagct
      301 gttccctctt gccttatttt accagtgaca gtaattcatt ccacttgagc tgactagctt
      361 atttcacatt tatttgcaca ttatgagcag tgtcattcta cttacccttc agacagtaaa
      421 tggtttgaaa aatgcagctg taacaaatat taggtatggg gaggggatag gaaaatgtaa
      481 cggggttcca aataaaaaca taatgaataa ataatatttt aaaattatct caattgagtg
      541 tatgcaaaaa taaaaggaaa ctggcattat tcctttgaga atacatgtct gtttcccacc
      601 atctagttta gcttccctag agtggagtta aataaaatat tacccatcag gtcaggaaaa
      661 taattagtcc tgcattattg catccttccc aagcaatcat atttgaccca tatatattat
      721 g
//
LOCUS       KCPA01001998             487 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 220115tic ultra-conserved element locus
            uce-3589, sequence.
ACCESSION   KCPA01001998
VERSION     KCPA01001998.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 487)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 487)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="220115tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>487
                     /note="ultra-conserved element locus uce-3589"
BASE COUNT          174 a           89 c          100 g          124 t
ORIGIN      
        1 gattatgttg ctaccaagag cgcttcctgc acacaaaatt gacagtattc agtgtgtatt
       61 gtcaaattag gttggttatc atgcatgagc atatggtgtt aacggatttc agaggctgac
      121 aaatgccttc atagactaga aaggcatgga caaaacataa gaactgtaaa attcagtcac
      181 caaatcaggc ctagttgcac atcaactcat catggacagt ctcattcaaa ggaataatgc
      241 atagaagaag tcacacacac atctcataaa acaaaattta tctttaattt gtaagtgtca
      301 acagcagtac aaaagatgga gtgatggtga atagattaag ggtagagagg acagtcttga
      361 ggtaaatgag cataaatagg cagtcttata gacactcccc tgaggggtct aaacccctat
      421 catggcatat actgtatcac ccaaggatga catgtttaac atatcaggaa agcaccttgt
      481 gcaaaaa
//
LOCUS       KCPA01001999             573 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 220221tic ultra-conserved element locus
            uce-1629, sequence.
ACCESSION   KCPA01001999
VERSION     KCPA01001999.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 573)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 573)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="220221tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>573
                     /note="ultra-conserved element locus uce-1629"
BASE COUNT          191 a          123 c           88 g          171 t
ORIGIN      
        1 tcttcatgct gataacaata aagtatttta tacagcgatc aatttttaat gctttattca
       61 ttgattaaaa gaatataaca tttaacataa accatacaac atcagtcatc aattcaaaca
      121 ttcagctggt ttccttacat tttctgtcag gagaatctga tcacatttat aagataaaat
      181 ctcaccacat ctggcatata cacacactgt gccagtggat tcactctact gatgtacata
      241 taaaatccgc atggtatgtg ctcactggag acaaaacagc gcacacctgt caaaaggtca
      301 ttttaatata agatggtaaa accatttgta aaacacatat aaactttttc cataaataga
      361 atcatatctg gacatctgtt gcataaattg tgttttccaa agcttacaat atagcagcca
      421 ggtctcagca ctgctgggca cccacgttgg ccacttttta ttattgcaga ctgtccttta
      481 aacattaaat gcacaacatt cgtaccactt aaaactgggg tcaggtggaa gtctcacaga
      541 gaccacgtct gtaccgcggt tgccctgaaa cag
//
LOCUS       KCPA01002000             512 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 220332tic ultra-conserved element locus
            uce-3828, sequence.
ACCESSION   KCPA01002000
VERSION     KCPA01002000.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 512)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 512)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="220332tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>512
                     /note="ultra-conserved element locus uce-3828"
BASE COUNT          172 a          108 c          102 g          130 t
ORIGIN      
        1 ttcttccttt caactgctag aggccttgaa aagcagaatg aattaagttc ataatataat
       61 tgcttctatc ctgactaaaa gaaattacaa aaaattcagc gcatcagaaa ctcagcactg
      121 aaaaggggaa agaagtgcaa gtcttcccag cagtgaacct caaatttttt tacatttctc
      181 tcatacaaaa gtgatacata ataggaaact taacttctgt tctgtttggg tgagccagga
      241 agccttcttg cctcatgtaa atggaatggc agctaggcac ttctgaaagg agaaaatgaa
      301 aagactgtct gcaattaaaa gtgtgcaggt tatcaacggg actacaagca gaagagcaac
      361 tgcaagttac agtgagaagg aacctgtcaa ccagcatttc agagcagagg catggccaag
      421 aaagacatga tgtgaggctc aagatcctat ctggcacttg aactccaaac cttttctaat
      481 cacctttgct ctttggacca tccacacccc tg
//
LOCUS       KCPA01002001             585 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 220440tic ultra-conserved element locus
            uce-5113, sequence.
ACCESSION   KCPA01002001
VERSION     KCPA01002001.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 585)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 585)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="220440tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>585
                     /note="ultra-conserved element locus uce-5113"
BASE COUNT          184 a          116 c          109 g          176 t
ORIGIN      
        1 atattaattt ggaaacagta gccttgtagc aacatattgt tcctggagaa gaacagtact
       61 actttttcct tagctctatc atctcttata attgacagaa aagaaagttt tcttaaattg
      121 ttagaacacg tttattttct tgcaaattaa ttctttttaa ctctttatga tagctttgaa
      181 tcccataaag aaagatgaat tatcacatac tgagcccaag ctgtgaaaca ggaggagaca
      241 aatagagacc cctactgtga ttaacaatgt agaagaaatt ccagactcaa aagaaaaatt
      301 ttcagtcctt tttctgagcc cacaaaagct gttagtatgg atttgaacag tggagggcac
      361 tcttgctatg caaaaccggg tgctgacctg gcacactcgg tttgatctat tcagtagcct
      421 gaatctcaga atttgttaag taacagccac ctgtggcaca ggcactaact gtactctggt
      481 taaaacattt gcagtttcta atctgtgcag cgaagcactt cactatatca aacactggcg
      541 cctttctctg tggacgcaga tgtggaacag atgcatgctt cacaa
//
LOCUS       KCPA01002002             631 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 220545tic ultra-conserved element locus
            uce-6566, sequence.
ACCESSION   KCPA01002002
VERSION     KCPA01002002.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 631)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 631)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="220545tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>631
                     /note="ultra-conserved element locus uce-6566"
BASE COUNT          177 a          123 c          138 g          193 t
ORIGIN      
        1 attcatctgt gtttttcctg ctggagaatt actgcctggc acatcaatag gctgcaaatt
       61 atataagggc tgtgtttttg cagcaggatt gccattgtcg ggagggtctt ttagctaaac
      121 tgcctttttc tgcaggaatt tcagatgtct gtaattgctg ctcctttcag cacagcttaa
      181 ggtatcaata tcaactcgat ttgaatatca taagtgggaa gttgctctaa gcaaaaacat
      241 gtcagttgcc caggtgacat tttgtagcaa acaaggaaat cacaactcca ggaagtgttg
      301 tattttatgc caacaacaat atgacagttt tctctgtaaa gaaaacatga cacttttcca
      361 aatatcagag gatgcctccg ctgctcaagg gattcctgta ctgtcactga aatggaaggt
      421 cacaggctgg tttcatgatt tctatagttt caaaatgttg tggtggagcg tttgcacgct
      481 aaatgctgta ggctaaggga aatctttccc ttcatctctg aaagaagtga caggaagaaa
      541 aaggtcctac tttgacagcg gtaacctcta ggtctagagg ttctgcccca agcaactctg
      601 aagtaaaatt acctatgtta atgtgttgtc c
//
LOCUS       KCPA01002003             387 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 220649tic ultra-conserved element locus
            uce-3992, sequence.
ACCESSION   KCPA01002003
VERSION     KCPA01002003.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 387)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 387)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="220649tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>387
                     /note="ultra-conserved element locus uce-3992"
BASE COUNT          117 a           84 c           85 g          101 t
ORIGIN      
        1 agaagtagtc aagatgtggg gggcagaagc agtgataatt gttcttcgat aaaaaggtag
       61 aaaatatcca gcttcatcag taatgcaggc cccgccatcc ccagatgtta cagaagcatt
      121 agaattgctc cctgcaagaa aaattggatt agtcacaatc ttgtcgacta atgggcacac
      181 tctgtgatct ttagagcttc atttactggg ttaatagtgc tttgcctgag ttcctttgca
      241 atagggaaaa ctgtaagaag aaatattctg ggtgcagtcc acagccactg acacgagtaa
      301 tatcatattc atcacagaca gacctcgtat ctcattacta ctgaagagtt tgcccccaag
      361 gcatttaagc tcagtcaggc caggccc
//
LOCUS       KCPA01002004             440 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 220759tic ultra-conserved element locus
            uce-6467, sequence.
ACCESSION   KCPA01002004
VERSION     KCPA01002004.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 440)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 440)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="220759tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>440
                     /note="ultra-conserved element locus uce-6467"
BASE COUNT          145 a           77 c           74 g          144 t
ORIGIN      
        1 tatctgttat atggctattt tttaaaataa aaacacttca aactgccttt ccgttaatta
       61 aaaacacatc aagccatgga taaagtattg tggaatggct tgttgtggca ttgcctttta
      121 cagctaggaa gcgaatttct aataaaatgg tttttgaaag gaatattgcc ttcattcaaa
      181 tctcctataa aaactaccca tccattaatt ccaattaatg acactacaac atttccacta
      241 acactggtag taattcttgg ctaatggatg attttcaaga aaatcagaat caatgttatt
      301 ttggacaggc cttgcagaat taatttactg cccaaatgta gttaaaccag catataaatc
      361 acagtggttt gaactggttt ctcagtgaca ttgaatacag tccatgacat gagtttcctg
      421 tgggctttac agggaggata
//
LOCUS       KCPA01002005             816 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 220863tic ultra-conserved element locus
            uce-5101, sequence.
ACCESSION   KCPA01002005
VERSION     KCPA01002005.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 816)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 816)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..816
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="220863tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>816
                     /note="ultra-conserved element locus uce-5101"
BASE COUNT          284 a          133 c          157 g          242 t
ORIGIN      
        1 aaacatgtat gtttttcata aagctctgga aattgtactg ggcccaaggg aaggtaccaa
       61 gtggaaaccc tgatatcttg agattagaac tctactagtc ctgaggtaca atgtgctgtt
      121 tgtaacaatt ataataatac acctgtacta ccattgtcag tgtggagtag ccacatgggg
      181 tctcattagt attgtattag gactgcatgg ggaaacggat aatggcccat aatgaaaaat
      241 gccaaatttt ctatataata aaaatgaact tgattaatga aaatcacttt cagggaaaga
      301 gttacagcgt tgttagaaat aaaaaatgat gtattaatcc gacactctta cagatggtcc
      361 caacctcctg acaactgcta ttcatttgag atgctattag catgcataat tatgctaatt
      421 aagttgtaat taagcaccaa ttcttcagag ggcttttttt gtctatcatt taatacaact
      481 cagcttcaaa gagtgcttaa agctttacac agtgtttcat gagaaagggg ttcccaagtt
      541 tcttagcaaa gattcagcag ctgagctatg gaacagggcc tgtaatcttt gttttggtta
      601 aagggaaaac agcaaattga agcagggtct gccaattgtt gataaaataa ttaacatttt
      661 ctgctaaaat agcacagttc agactaggac aattatgaaa aggagaaaaa tggtataatt
      721 atcaatggag ccaacaccag tggactatta tggctgctac cccctaattt gaaaaaaata
      781 attcattgaa aagtagattc ccgtaaataa taataa
//
LOCUS       KCPA01002006             484 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 220967tic ultra-conserved element locus
            uce-4001, sequence.
ACCESSION   KCPA01002006
VERSION     KCPA01002006.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 484)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 484)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..484
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="220967tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>484
                     /note="ultra-conserved element locus uce-4001"
BASE COUNT          161 a           72 c           96 g          155 t
ORIGIN      
        1 tatattacag tagagcatta aagaagcaga ataagtacat ttacagcctt cttagtgctg
       61 cccacagggt gctataaatg cacaaactgg atataattga agcacatatt aacttacctt
      121 ctgttgtaca ggaagagcat aagcaggccg ttaatgtgca cagtgttgaa actcttaact
      181 tgggggatga gaattagctt gcagtagtaa tttgataagc acctgggaaa attgcaagct
      241 tcatttcctg caacgtggaa tatgattaaa aacagaatat attattatca agggtaccat
      301 taaaaaatgt gtagacagca ttctatgatg ttaaaacgga aattgaaagt tgtatccaga
      361 tgttgaagat gctgcctgtt aattattgtc taccacagtg cattgaaagt gcaattcaat
      421 tatttgcttt gtcaagcaat attttgatta acttgaacgt taattttgta catctggtgt
      481 tttt
//
LOCUS       KCPA01002007             768 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 221081tic ultra-conserved element locus
            uce-3633, sequence.
ACCESSION   KCPA01002007
VERSION     KCPA01002007.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 768)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 768)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..768
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="221081tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>768
                     /note="ultra-conserved element locus uce-3633"
BASE COUNT          258 a          118 c          145 g          247 t
ORIGIN      
        1 tgagaaattg gcagaagttt tcaccctatg aaaacattaa gataaataaa gcaaattgat
       61 aaataccatt tcatagaata taggctctag gatttaatgc tctaacacat agcagtaaaa
      121 gatcattcca ggtacggaac atcgtatttc aaaagacagt taatgctgta aaaggaagga
      181 ttatatgaat gattcttata cctttatgtc ccaagaagta acttcagtta cgtgggattc
      241 ttgagtaagt aaagtaagag gttatgagtt aagttgcaga caaagggctt ctactaagta
      301 ttacatcatc aaaatatttc acagacactc agaaataagc tgtacttctg tatgtcagtg
      361 aagcagcaaa ttgaattctc ataatatatt ttgaaaatga gtcttgttag gtttgatgag
      421 gtggaaaacg tactgagatc actggtttgt tccaatacat tcagaacgct tttcttggat
      481 gtttgccatg gctaatcttt ttaatggcag tgtagcttgt aaacctattt ggtagagagc
      541 tgtatgtctc cgtttcaggg tatcacacca agcaggatgg caaataagtt tctcttcaag
      601 catgcatacc ctttttttac aataccagaa agtttatttt aagacatacc tcagtatttc
      661 ctttatgaat tcagtgagga gctgaataaa atgcagatgt ctttgaaata cactcacaca
      721 caatatgtag atgtttttta agagttttat caaggggaga cttcaatt
//
LOCUS       KCPA01002008             615 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 221187tic ultra-conserved element locus
            uce-5280, sequence.
ACCESSION   KCPA01002008
VERSION     KCPA01002008.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 615)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 615)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="221187tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>615
                     /note="ultra-conserved element locus uce-5280"
BASE COUNT          149 a          157 c          148 g          161 t
ORIGIN      
        1 agcacaactg tgcacacata aataattcag gccactaaag gctgctgcgg cggcgacttt
       61 ccaggggatt taatgttccc gtccctcaca ttcctgccac agcagaaaga aattacaact
      121 ggatcagaag gagcaggttc ccctctccag ggagccgtgg catgccaaag gctgctcccc
      181 gcttctgcct gctcctgggg cctctcctgc agtccttgac acttcccttc tcaaggggca
      241 agtccctggt gcatcctccc agagtaattg tgaaattatt atggttggtg ttttaattta
      301 aattggatgg agaaatgttg tactgcggct gcctcatttg ctatggattt tcacttaacc
      361 aaattgatta gtcaaccaac tagacttacc ttggaagttg taatcattca ttattagatc
      421 taattttcat gtcgctcccg aatggaagtg caaggacttt aatggagcca gggcggagcg
      481 tctgaaccct tggagctgtc accggctgcc tgctcagggc ctgtgctgca tcccatcccc
      541 ttcctgggat gcaggaacgg ccaggctgct caggaatgac catgaaatac agtaaggaag
      601 gtttacagtg caaat
//
LOCUS       KCPA01002009             650 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 221295tic ultra-conserved element locus
            uce-6125, sequence.
ACCESSION   KCPA01002009
VERSION     KCPA01002009.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 650)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 650)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..650
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="221295tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>650
                     /note="ultra-conserved element locus uce-6125"
BASE COUNT          195 a          110 c          115 g          230 t
ORIGIN      
        1 agtgataagg aaatatgtgc tacttgcaag ttgctccttt tggcaaacat gggatatccc
       61 tttttagtat ggattctgtt ccatatgtga tcgttccttt tttgccaaac ttccttagat
      121 gtgcaccaaa ttgcagagag atgaatacca actttgcata atttgaacaa gaaagccttg
      181 cagttctact tttctgttta atttacaaat tatgagatac gtaggacata agtaagggca
      241 gaatagagcc cttaatctta attattcatt ctgcagtatt ataaatgact aaagattact
      301 tccaatgttt ggtataatct tacagtgtgc agatgtggtt ctctttggta tatgccatct
      361 ttactgaact cacaatttcc ataatgctgt cacattctgc atgggaagca gatttacaga
      421 taggtaatcc atgtaaggta ttttaaagac agcttattaa aggattgagg cctgctgtta
      481 aattacatat gctttcaatt gctatgagga gcaaacagta tcaagaagta caataattta
      541 gctacagctg gagaaaggcc tatttaaagt tttgatgaca gatcctttaa agttttcctt
      601 ttttctgctt tctatcttct cctgcatagt acagtatttc actttataca
//
LOCUS       KCPA01002010             721 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 221406tic ultra-conserved element locus
            uce-279, sequence.
ACCESSION   KCPA01002010
VERSION     KCPA01002010.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 721)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 721)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="221406tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>721
                     /note="ultra-conserved element locus uce-279"
BASE COUNT          233 a          112 c          137 g          239 t
ORIGIN      
        1 gattattgat gtgaaaggga tttaacaatc aaaaaacaat agttctttgt tacattgcta
       61 cttttaagca atttaagatg ctgcttggaa agataggaag tctcacgaaa ttttcaaaga
      121 caaagcacta atggctctta atatcactgt gtttatttta agagcgaatt aaaagagtga
      181 aagaatggtg caaataatta tttcatatgt tctttgcttg tgactgctgt aatcatccag
      241 gctgatttac aaatgtagac ttgaaggttt ctcagcttcc tgcagtgtag aagactgttg
      301 ctttggcact cacactcatg cccttgtaat caccactcaa aactgtgccc tggtacttcc
      361 aattcccagt gtcttgattg aacacctcat tctgtgctaa caaggtgtcc aaggtatttg
      421 aacaggggct gcagtcagaa aattgttaat ggtttcactc attaagagtt gctgcactag
      481 ttttggtaat ttggtaactg tctaaattgc aagttgattt ttcgccttca ttttaaataa
      541 tgatgttaaa atttgagacc aggaacacta acagctaaaa aaccccagaa gggtgcttaa
      601 atcactgtat ttgtattaaa gcagagggtt ttcataccag aaaaggtatg attttatttt
      661 tgaggttatg ttttaaaatt attgagaaat gcataaacaa gtattaaata gaaatataag
      721 g
//
LOCUS       KCPA01002011             533 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 221514tic ultra-conserved element locus
            uce-1107, sequence.
ACCESSION   KCPA01002011
VERSION     KCPA01002011.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 533)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 533)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..533
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="221514tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>533
                     /note="ultra-conserved element locus uce-1107"
BASE COUNT          143 a          130 c           95 g          165 t
ORIGIN      
        1 ataagataaa cacacaatta tctaaaatgt aatcttaata tgacttatta aaatagatta
       61 cattttaatg tgcactgcaa tttttatcca gcaccccctg tgcctctccc ctgacaacct
      121 gcaccgctgg agatacaagg cgaaaacccc gccgctatct ccctctaaat ggctccattt
      181 ggtgttgata gtcagataca gccctcacct ttatcccagc ttgtttctga cccactgagt
      241 tcgtgttaat cacccctgtg ggcaccaata atttccccat atgtggaatt tgataagtta
      301 gagcacccac ttcatttcaa gaagattcca gctggcttat cgctatggac agcttcaagc
      361 acttccatgc tgctccttgt attctgagct ttatcaagtg ctttgcacgt cttttatctc
      421 ttaattgaga cctgactgca agaaatgcct atctcttaaa gtgtggtgca ttaagtatta
      481 acttgaactg ctttggctac ttgaggtaca gccttaagaa gctggaaagg gtg
//
LOCUS       KCPA01002012             473 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 221623tic ultra-conserved element locus
            uce-2356, sequence.
ACCESSION   KCPA01002012
VERSION     KCPA01002012.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 473)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 473)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="221623tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>473
                     /note="ultra-conserved element locus uce-2356"
BASE COUNT          151 a          105 c           86 g          131 t
ORIGIN      
        1 aaaaaattat ccacttcctg ctgttttcct ttcctcccca taaagcgagt gtcttatcct
       61 cagagaaatt cacttcattg ttagaaatag ccaaaattgg cttgcaacta gtaaagatgc
      121 caagaatttg caccttgctc tgtgacctaa agcaaaaatg acatgaacat tgacaaattt
      181 gacaaggaaa tttgtgcaaa aaacaacttc tatttggcta gccaagcagc aaatatgtcg
      241 gatgatatgc tttattaagc aatccatttt tcagcaatag ctgcaccatc tgcaaaggtt
      301 agtgtgcatc aggctttcca cagaatttca tctgcgtctg cagctaggtg caacacacga
      361 ccacattttt catgtacata caattttgga tgcaaataga atacttgatg aaagaggtga
      421 ccttccggac tgacttcccc catgcagtaa agtcacaggc gcagaagcag ctg
//
LOCUS       KCPA01002013             782 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 221733tic ultra-conserved element locus
            uce-6787, sequence.
ACCESSION   KCPA01002013
VERSION     KCPA01002013.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 782)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 782)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..782
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="221733tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>782
                     /note="ultra-conserved element locus uce-6787"
BASE COUNT          211 a          136 c          153 g          282 t
ORIGIN      
        1 tcttaaggga atacatggaa atgaagtggt aaatactagg tagtaaaata agcatctgta
       61 tcgcagacag ctttgttctg gcaactgatt ataaaattat tgattctact gttctttcct
      121 attgagggtg tcactatgta cttgttcaca ggtttgcagg aaaatttgct attttttacc
      181 cttgcttatc ttctcattca gaatttttga tcgggttatt ctgcttttgc tcttgcccat
      241 tactaccccc ctgagggttg gtagaggata aggacagcaa aggtctgtct gtctttattt
      301 tctctatctc ctccctttct atctctctgt ctctctttgg ccgttgaaaa tgtaggtcat
      361 attgcatcac cataaaatgg aacagtcaga aaggtgtttg aaaaatgctg acatccttag
      421 cctggggtgc atgccagtgt cctttgttta cattgggaat agtgttgtac ctgtgtagga
      481 accagcatct ctgttaaggt tagtggcatg gtacctgaat tatgagtcag attttaggat
      541 gactttcatc tgcctgcagt aatttaaaat tagacagata aaatgcagct actcaaatac
      601 acaaggagct aatttgaaat ccttaatctg caataactgt gacggtgttg tttgaataat
      661 gttaccttta acagagaagc tcagtaataa attttgcaaa tcctgttaat catgtactct
      721 caattgcctt gattaactgt gcctgttttg aaaagtatgt ttatattata tgtttgtata
      781 tt
//
LOCUS       KCPA01002014             422 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 221839tic ultra-conserved element locus
            uce-3429, sequence.
ACCESSION   KCPA01002014
VERSION     KCPA01002014.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 422)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 422)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="221839tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>422
                     /note="ultra-conserved element locus uce-3429"
BASE COUNT          142 a           61 c           75 g          144 t
ORIGIN      
        1 aacgggtgct gcaaggatgt aaattagcct gtaatttact ttcagtagtg taaagaaaaa
       61 aaatcacttt gcctgaagtg tatgcatctt tcttaagggt gtacccagat tttaattatc
      121 taaatgtaaa tacttaacga attttactta gagtaatgag ctaaagtgca cactacataa
      181 atgagatgtt ctaattaatc atgtatgaac tactggttta aagaaaagct atgtgaattc
      241 tgcgaatgtt gggctattgc caaattgcta atcagcattt gcattcatag atggcttcac
      301 ttaataagtt gtgagacgtt cagcaaatgt tataggaaat tatgagtttt tagatgcata
      361 aacttttaac ttttaactcc ttccctcaca taatctattg aaatgttgga gaatccttga
      421 aa
//
LOCUS       KCPA01002015             525 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 221946tic ultra-conserved element locus
            uce-7019, sequence.
ACCESSION   KCPA01002015
VERSION     KCPA01002015.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 525)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 525)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="221946tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>525
                     /note="ultra-conserved element locus uce-7019"
BASE COUNT          125 a          133 c          115 g          152 t
ORIGIN      
        1 tggaatgtcc tcagtgaagt aggctgagag ggctgccaag tgaggaggca caacttagaa
       61 ggagaagaaa gaaaaggaag tctgattaag ttttgtcttg aagtgtctgt ttttgggttt
      121 gtccctgcat tgatctgcaa gggaatgagg caagtaatgg ccccttgggg accttcagga
      181 ctttcctctc aatgtcagcc gtcattttca atcaccctct ccctcccagc cattaatttt
      241 ggcccaggat catggggact tgtccatcta tcactcctaa ttgacactaa atgatctgtc
      301 agtttattga tgaacggcag gagtggaatt gtcacaatat attttacttt ctaacaactc
      361 ctcctgacaa ttttaccttg tccatctcac tctcctcaca taaatctcca ttggcctctc
      421 attccttctc ttgggctgat ctggtgccag ccacctccat gccatcggca cgcatcaagg
      481 acatcaagat ggtggtaagc tgcaggccca gggtctctct ctccc
//
LOCUS       KCPA01002016             639 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 222057tic ultra-conserved element locus
            uce-7024, sequence.
ACCESSION   KCPA01002016
VERSION     KCPA01002016.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 639)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 639)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..639
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="222057tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>639
                     /note="ultra-conserved element locus uce-7024"
BASE COUNT          193 a          125 c          111 g          210 t
ORIGIN      
        1 aaccctcaag tgtaacattc agtctctcaa gtccatgatg tatttcattt gctacggtca
       61 gagcaatttt aacaatgcct ttcattttct tatagcctaa aatgattttc tttctgtgag
      121 gccattctcc aaaacttctc ttcccttttc agggtatcat ttgcaattta aagctaacct
      181 ggtgagtgta cttacaatag gcttgcccat aaaatggttc aaggcctgcc tgcatgccta
      241 atgaggttga tgttgagcta tttagctctt tgtccttcca taatatctac ttaatgcagt
      301 tcaatgggag tggattgtta gaagcattaa agattctatt aagtctttac taaagccact
      361 ctattctagt ccagctgtat agtggcaaga gcattaaatt tgagaatgta gtgggaacaa
      421 gggaccagaa aaagcaccta taaaaaaagg acaaatttcc taacgaagta agaccacact
      481 caatttaaga cctgttactt ttgtatctag atctaaagac tttctcaatg tgcatctcac
      541 agtgttctga attaactcta gtttccctga tgaacaaggt acagtttaaa tcttgcacgt
      601 gagcagattt ttgcttcacg acgttattga aaacaaata
//
LOCUS       KCPA01002017             323 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 222162tic ultra-conserved element locus
            uce-4027, sequence.
ACCESSION   KCPA01002017
VERSION     KCPA01002017.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 323)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 323)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="222162tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>323
                     /note="ultra-conserved element locus uce-4027"
BASE COUNT           92 a           93 c           79 g           59 t
ORIGIN      
        1 acacacacac acacacgggc tcaggctcgc actcccgcgg ggctgcagct cccacggccc
       61 tcaggacaca cacagaagcc aagagacatt acggcaggca ctcacttgga tttgttctcc
      121 tcatagtgag cactggtctt aatgtatctg gccagttcta tctgcatatc gccgaataaa
      181 ggaaccacct gcagctgctg gaaaagaaaa caaaagttgg ttgaaacgcg gccctggccc
      241 cagcacaaca cgagggacta cttctgaagc aaagtgtcag ggtgttagca aagtgcaaac
      301 cggggtcatt tcacacctag gaa
//
LOCUS       KCPA01002018             433 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 222262tic ultra-conserved element locus
            uce-2224, sequence.
ACCESSION   KCPA01002018
VERSION     KCPA01002018.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 433)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 433)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="222262tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>433
                     /note="ultra-conserved element locus uce-2224"
BASE COUNT          155 a           75 c           70 g          133 t
ORIGIN      
        1 cacaaataaa gaccagtgtt ttgttttgcc aatagcctgg tgtgttttcc cctcctcttt
       61 tgttcagaat gtgcaacacc atcaaaggga cctgattaga acaaaagaac agggatcact
      121 gtaacaatta tgataaaaat gaaaatgcat aataaaaaca taccccaaaa tcaggaaaat
      181 aatgccaggt gaagatgaat acacatccgc tgggaacaat tacatagcag atgcatccaa
      241 aaattcatta tcaacgtata atttgacatg ttcctagtaa tgttattcat tgcatttaca
      301 aataattcat cacaggtgtt gtgaactaaa atggaataca agatacttat gttattcact
      361 aggacaagag gaaatgtcca ctttgtaatt gcacattgca ttcaattttt cttttgttgt
      421 gtaaattctt ttg
//
LOCUS       KCPA01002019             323 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 222366tic ultra-conserved element locus
            uce-2278, sequence.
ACCESSION   KCPA01002019
VERSION     KCPA01002019.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 323)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 323)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="222366tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>323
                     /note="ultra-conserved element locus uce-2278"
BASE COUNT          114 a           47 c           69 g           93 t
ORIGIN      
        1 tatttgttaa actatgtaag tcagaagata atatggcttt gttcataata ttacatagag
       61 aagattaagg atgggaaaca agctgcttaa atactgtaaa ctaattagta caatgaattg
      121 ttgtcccgag gatcatgaga tatgaaacat tggcaccaga acgtgaaata caccctgcct
      181 cagtgctctt ttcagtttat ttttatatgc atatatagaa aagagcagcc aaaaagaaag
      241 aggttacaga gagagaccaa agcctgtcag atgattgaag ctgacatttt gtcatcttga
      301 tatggggggg accagctgaa ttt
//
LOCUS       KCPA01002020             717 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 222477tic ultra-conserved element locus
            uce-7408, sequence.
ACCESSION   KCPA01002020
VERSION     KCPA01002020.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 717)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 717)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..717
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="222477tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>717
                     /note="ultra-conserved element locus uce-7408"
BASE COUNT          183 a          151 c          166 g          217 t
ORIGIN      
        1 ctgtagatta ttcaagcctt ctagcaaatg ggttaaattc ccactggtgt aaactggatt
       61 agctccactg atggagctga gctgtttcac accctctcct acaatttctc ctgttatctt
      121 caagcatggc aagaataaaa gttttagcat tactcctatg ctgtggatga taatccatgc
      181 ctttccctgt ccccacggag ctgagttgtc tcaagattat gtgccttaga tgtttagagc
      241 aattttgcct ggatcagagg ttatagcctc tgctttttaa cattctgctt ttattttcag
      301 gctatgaagt gtaatagttc accattttgg tttaagtatc acaataaaag tcagtgagat
      361 ggaacaggca ataagcagcc gttttacatc agtgctgctg agacggagtg cttaagtctt
      421 cattaaccta cagaggaagg agctacaaaa gacactagaa ataaaatacc agggatgagg
      481 ctcagatcat tcctggatct gcacaggcag acactttgga aggctggtct ctggtgggaa
      541 tgtgtctttg tgtctgtgct ctcatgcaat gaatagtagg gaatccccac actgtgcctg
      601 ggctgtgtca ctgctgctgg acatcgaaag gcaggcgggt actgcaggga cttcataggg
      661 atggcatttc tggccgcatc tctttgtact tcattaggcc ctttatcaga attctga
//
LOCUS       KCPA01002021             816 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 222586tic ultra-conserved element locus
            uce-2306, sequence.
ACCESSION   KCPA01002021
VERSION     KCPA01002021.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 816)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 816)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..816
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="222586tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>816
                     /note="ultra-conserved element locus uce-2306"
BASE COUNT          257 a          157 c          164 g          238 t
ORIGIN      
        1 tgcctctccc attcaaacag catatagtta gtgtttgtga ctttcccctt gacaactaga
       61 taagaagata aatgtatagt ttctcttaat tagcctttct taattaaaaa caccagaggt
      121 atttgtgatc ataatgaact cttctgacag aatggtcact tgttcttctg gacgtcagcc
      181 catgaaaatt agatttattt ttttaaagtg gtataaattc tgtgctaagg aagaaataaa
      241 tgatgcccgc aaaattttat ctgaatgaga tggatgtgta tcttgtgggt tttagaatgg
      301 tgtggggcag tattagccat cattagcacc ccagtatgga tccaattcac taattactta
      361 tgctgtcttg gttcactgag atttaagtac caagtcaatc ccattatctg cagtctccca
      421 agcttgccag agtcatccgt cttttatgga aaaaaaagca caagggttat caataggacc
      481 ctgaaatact tgggattttc ccacttcagg aggaggcaag attagtcctg actaaagttg
      541 catcttctct aagctgctac ttgtgatgtg ataaaagtga atgctgacaa ttatccatta
      601 ctacataaag agtaggagag agaggggagg caaaagcagc aaggagagaa gtctgccaca
      661 cacgcctgca tctgtcctat ggtcgcaggc agcttttcat atcacctcag agctacaaat
      721 tacaattcat ctgttacaaa cacatgataa tatagtcaga aatcagaaat taaaatattc
      781 caacggcctc gggcctcctc agagagaaag agagag
//
LOCUS       KCPA01002022             631 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 222695tic ultra-conserved element locus
            uce-5044, sequence.
ACCESSION   KCPA01002022
VERSION     KCPA01002022.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 631)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 631)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="222695tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>631
                     /note="ultra-conserved element locus uce-5044"
BASE COUNT          126 a          131 c          160 g          214 t
ORIGIN      
        1 aaatatcttc aagtaaaaga cccatttata actctgcctt tgcccttaaa tgcatgccac
       61 atcgaatgtg gactttgcct tttgctctct tcttctctct atgcggaaag ttcccttgac
      121 aaatcttggg ctgaatctgt tttttcacac caggcactcg gtgctcggtg tctttcttct
      181 ctggagcttg cgtagcactg gtggtggagg tcttgaagtg ttggatgtgt gaagttggat
      241 ctccacagta tgttgcagta ctctgaaagg gagctgggat cggtttgctt gttgcttggt
      301 ggtggtgaaa aaaggctctt actggttcct gatgttcagt ttgatagcaa aactgagaac
      361 ttattgtgaa tgtgatcaca tcacaataat gacaccttgt agtgctaaag ttctccttta
      421 tctaaaagcc cgaaatctcc tgtctggttc agttcgctga cagggtagtc tgatgagtgg
      481 aagaattttt tcattccatt ttcctttgtg gtgctgttgc ttttttacgt ttgtgacccg
      541 gggagggaag cagaagctga gtttctgtcg gtacttcccg cgctgctctg atgccgtgct
      601 ctcgccagac tcctggtggt cgtttggtgg g
//
LOCUS       KCPA01002023             464 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 222800tic ultra-conserved element locus
            uce-4610, sequence.
ACCESSION   KCPA01002023
VERSION     KCPA01002023.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 464)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 464)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="222800tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>464
                     /note="ultra-conserved element locus uce-4610"
BASE COUNT          104 a           99 c          119 g          142 t
ORIGIN      
        1 cctattcagg ggtcggtccc tgctgaggca agggcagcaa atttcagaat ttagcgtact
       61 gtcagagact gcaggctgag gagcaaagga gtgggaggcg taccctggct gcaggggttc
      121 catgatttgt cactcacact aaccagtgtc ttctcttgtc ccaggaacgg gtggaatatc
      181 tctttctcat aatttttaca gtggaagcat ttttaaaagt aattgcatac ggacttctct
      241 ttcaccccaa cgcttacctc cgcaatggct ggaatttact agattttata attgtggtag
      301 tagggtgagt ttgtttttct ggcagccttt gggagtggtt gaatgcttta catacgggtt
      361 tagacattgc tgtccatcct gttcctctga cggtttgcaa ggcaggcaga tctgggaacc
      421 acagtccaaa gctggcctga atgtgcttaa ctgccatttg tttt
//
LOCUS       KCPA01002024             470 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 222908tic ultra-conserved element locus
            uce-2136, sequence.
ACCESSION   KCPA01002024
VERSION     KCPA01002024.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 470)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 470)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="222908tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>470
                     /note="ultra-conserved element locus uce-2136"
BASE COUNT          141 a           99 c           90 g          140 t
ORIGIN      
        1 accaatacaa atgttaccta acccttcaga tgcgagtaag aaggttttaa ttaagagaag
       61 ctacccttac aaccttcaga ataaaaaatt atctatattt atccacgaac tcccaggctc
      121 cctggtttta caagcactta aggcagcccc gctggtgaat tccggccggc ccagtaatga
      181 tttaggtgag attaacaaat atgtcaatgt ctattttctg cttaatttaa aagcagcgtc
      241 tataaagatt tttgacttct gaaccctgtt ctcctggaag aaagaaggta acaatgagga
      301 ggggggataa agagtgatta tcccatcatc gatcgtttgt caggagcatt tcttattcac
      361 tggactattg taaaaagcta agctctcgat caatcccgta agccccctgt acaattaaat
      421 atcttggaat ggttttcttt ctttcctagt cagatcttga ggcctcaggg
//
LOCUS       KCPA01002025             455 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 223017tic ultra-conserved element locus
            uce-4094, sequence.
ACCESSION   KCPA01002025
VERSION     KCPA01002025.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 455)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 455)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="223017tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>455
                     /note="ultra-conserved element locus uce-4094"
BASE COUNT          143 a           80 c           68 g          164 t
ORIGIN      
        1 aaagtttttg aaccttctgc agttatgaag acttgctgtt tctgagctat ttttctaaaa
       61 tactcttcat tgcagaactt gaagaagtag aactaaaaac ctaatttctt ttctcctttc
      121 tgcgctgcaa tcgacgaagt gtgattaata atagatttaa atttgctaag tgcatttact
      181 cctttgtgcc atcataaaga gaatctatta ctgtaaaatt gaggcttagt tccaaattgc
      241 accattatga agttttcttc cagcaatgtt ttgtctctaa tatacttccc tcattgtaat
      301 tctattgcaa acctgatgtc tagcatcaag tctcacaata attattttaa attgctacta
      361 ggaacagtag tcctggtggg atatattact accattctaa caagatgaat ttcaatgcac
      421 ttgtaaccac attatagtgt attatgaaaa gaaga
//
LOCUS       KCPA01002026             449 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 223128tic ultra-conserved element locus
            uce-5028, sequence.
ACCESSION   KCPA01002026
VERSION     KCPA01002026.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 449)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 449)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="223128tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>449
                     /note="ultra-conserved element locus uce-5028"
BASE COUNT          134 a          120 c           85 g          110 t
ORIGIN      
        1 ccccccaatc tctccccctc cttcccatcc ggcatctact cacgcacaca tactctctaa
       61 ctttttgttt ttagtagctg ctgccccata agaaatgcta tccaacagac ctggtgcctg
      121 tcaccgcttc ccatcacatg cctggtaatt aaaccctgac tgatttattg actgacagcc
      181 aacaaatccc aacccagttt ttatgatata catgcctccc caggctaaat tcactcccca
      241 gctgaaaagg aggaaaaaag cgcacacgtg cgcatgatct catattggat gaaggggaga
      301 catttttcag cacaacatct ctttcaagac ttggaaaggg aatggagggg gaggaggaaa
      361 gaagtagtaa acatcattac ttcagcttta agattcattt gaaacgtctc acgtacaaaa
      421 gagctctgaa ggggaaaaca agacgtgct
//
LOCUS       KCPA01002027             406 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 223233tic ultra-conserved element locus
            uce-5933, sequence.
ACCESSION   KCPA01002027
VERSION     KCPA01002027.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 406)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 406)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="223233tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>406
                     /note="ultra-conserved element locus uce-5933"
BASE COUNT          102 a           98 c           73 g          133 t
ORIGIN      
        1 tatactgctg ccttttcaca gttcatgctg cccttctgct aaacgctgcc ttctgtcttg
       61 cttagttaat ggttacctcc ctgctggcct agcaggaggg ggctggcagg actccacccc
      121 agctccccag gagcgttcca cacaacgcct gtggaagtgt acaaagtgtc aacctcagcg
      181 tagtttttaa cctggagtga tagctttact gatttgccac tttactactc ttgttaatga
      241 atttttaatc ttcttaatga cattaaacac ggaaagtaat taaggaaaac aagtttgaaa
      301 ctgctgactt aaacccttta ttccgaacta tttaatgtag aattaatttg attttgccca
      361 ttattcaaat gaacacatta ccttcctgtg cattggcctc ttttcc
//
LOCUS       KCPA01002028             699 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 223342tic ultra-conserved element locus
            uce-573, sequence.
ACCESSION   KCPA01002028
VERSION     KCPA01002028.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 699)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 699)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..699
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="223342tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>699
                     /note="ultra-conserved element locus uce-573"
BASE COUNT          210 a          131 c          146 g          212 t
ORIGIN      
        1 ccttttgttg cacagacaca gtgctgcttt ggcagcagtg ctggcaatgc tgttttctag
       61 cacaagatca ctgagtgagt ttgtagtata tagacagagc aaggcaaagt gcaaacgaac
      121 catttaccaa agctattcaa ttaaggaaaa gtccctacaa agaaaatggt tttatagcat
      181 gtcatgaaat acttgccttt tactttaaag aagactgttt aagggggatg attgtagagt
      241 atgtaccact tctaacatat ttgctgtgca gaagtacata agcgtgagtg atgtagaggt
      301 acttgtttat tatagagcac atttcaatgc agtaatcata aatattgcta aggttgtgct
      361 ctgttgaaat atgacctaca tactcttgat tgtttgtgtt acgtgatttg tctgacaccc
      421 attacattct gggtaatggc agccatttgt tgctgtgcac agcaggctct tttgacaaaa
      481 gaaaataggc agcaataaaa aagctatagt ctgaattaca ttctgcacag cgctgcactg
      541 ctgagagttt gtgcaagtgt gttaacaatg ctctgaactg cctcttgtca gccttcagcc
      601 tgtaatggcc atctgtcctt ccataaatct gtcaaaacct gctaagttca agagagagta
      661 cagaatatac cttgtactgt caacacctaa atgtacacg
//
LOCUS       KCPA01002029             744 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 223450tic ultra-conserved element locus
            uce-917, sequence.
ACCESSION   KCPA01002029
VERSION     KCPA01002029.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 744)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 744)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..744
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="223450tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>744
                     /note="ultra-conserved element locus uce-917"
BASE COUNT          239 a          137 c          117 g          251 t
ORIGIN      
        1 caaatgaatg taaaaatgtg cttgccttgt ggcctagagg acaaaacagt aggatcaatg
       61 ttctttttgt actctatgaa gcttgagatt aaagtcccca ctgataaact gaacattctt
      121 taaaagtgac cagaagcaaa cagtgtctgt ttgctgctac tttattagaa agataccact
      181 gagaatagct aagaatacta tttgatctta aacaggttga ccaaattatt gcagttggct
      241 ccagtacatg agatgccttc tgcaaattat tgtttctggt tataaacctt tataatatct
      301 cagaatgaat tatgtatgta tttcatgttt tcttttcttt tatcagcctt gatgttctca
      361 tttcaagttt caccctagcc tcctaataat gcaatattga ggccattcag acactaatta
      421 tgcctccatg gctttcttga aatgactaaa tcagcatcag ttctataatt atcatgagta
      481 agtttgtatc tgtgcctcac accacatgaa aagcacaact ttaaatgatt tatgaatata
      541 tgcatctgac atcgaatgtg cactttctta tacatacaag aggtacagaa tatttcaaca
      601 tatgtacagc tgcatgtatg ttctcagctt cactgaactc ctctgggtat cttacccgag
      661 tgtacaaaaa ttttcttaac atgtgtgaca taccatcaaa aagtgtatat ttatttaaat
      721 agaacaaata taagcaagtg ctca
//
LOCUS       KCPA01002030             416 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 223557tic ultra-conserved element locus
            uce-1722, sequence.
ACCESSION   KCPA01002030
VERSION     KCPA01002030.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 416)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 416)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="223557tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>416
                     /note="ultra-conserved element locus uce-1722"
BASE COUNT          138 a           60 c           72 g          146 t
ORIGIN      
        1 gattacaaat cttacaaaga tgacaggtaa atgtttgaag tccctttagc ttctattttg
       61 taattgtaag cttaattgct ttcaattttc attgtataat ggaacattta attttaaaca
      121 attaaaatta tttgttttac agcaaatatg tattatctgt cttttacacg gcttatggtg
      181 gatgaggaca aaaactttgg aatagcaagc taacactgaa aaaaaaaatg acaaattaat
      241 ctgtcctatt atccaggcta catcaggagg ttggacttca atgcagtaca tttctataaa
      301 cagtttgtgt aagaactttg gttcgttatg cttgattccg cactttttca actcataaca
      361 cccagagtat gagaatttta ctgatactta ggttttaaca tgggtgagaa ggggaa
//
LOCUS       KCPA01002031             549 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 223661tic ultra-conserved element locus
            uce-4735, sequence.
ACCESSION   KCPA01002031
VERSION     KCPA01002031.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 549)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 549)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="223661tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>549
                     /note="ultra-conserved element locus uce-4735"
BASE COUNT          167 a           87 c          119 g          176 t
ORIGIN      
        1 atttgggtat tttgcatgga ttattgaatt agctgtttaa agttgcatcc tgagacacaa
       61 ctggtgtcta tagtattaga tgttaatgtg tatgaaaact ttttgccaca aaggatcatt
      121 attaatttat tgagaacaaa tgaagtttct tttctcagtt gttttgaact ttaaacctct
      181 atacctgata ggaaagggac actctaatag tacttccctt gtgtcctatt actggatgtt
      241 tatggagtac cctgcattat ccagggagct gacacgatga cagggagtca tttggagtca
      301 agaaatgctg aaagagacca ttaaaatgtc ttgcagggag ggttccaaca aggacacatt
      361 ttaacgcttt caccaatgct cactgatatg aaaagatgaa tttattgctg acagctgttt
      421 ttcaaagatt aaaaggcagg gcagaagtgg ggcaaaagtt agttgtaaat gcttattcct
      481 aatcctgcag cattcagaaa tgtttaggca ggatggcttc tttctgcttg cacttagaaa
      541 tgaagcaga
//
LOCUS       KCPA01002032             671 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 223769tic ultra-conserved element locus
            uce-2729, sequence.
ACCESSION   KCPA01002032
VERSION     KCPA01002032.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 671)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 671)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..671
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="223769tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>671
                     /note="ultra-conserved element locus uce-2729"
BASE COUNT          151 a          125 c          121 g          274 t
ORIGIN      
        1 cctataaatt tagtcttact aaatgacttt gatgtctatt cacatggaga aatcaatgac
       61 gtaacccagt tcctttttca catgtttaat cagttgttta atggcaattg cacgcagctt
      121 gttctcgctc tttctcttta aattttagat ttcaagtttt ggttggttgc tcgccattca
      181 tgttggtctg tttttttagt tattgtgata actttctgta attattttgc tgctgagttt
      241 cttctgcctt tctcttcacc tcctcatttt ttgtcttgca gtcctgttac tctgatcaac
      301 ttctggccag tagattctgc gtgagtactt ttgctgaagt gtgctgctgc tgctactgct
      361 gctgcgctcc ctcacttatc tctttgttca gttttacatg agatcatttc cttctttttt
      421 atgattattt cctttgatgc actctctgaa ggaatgtttt gataccaaat gagtagaatg
      481 agataaatcc tggaatttcc agcagtcatg aattttgtac tgctggagta tgtattttta
      541 acaggggttt cgtgcagacc tactaatgct tatcaaagtt tgtcatttaa aagccttgaa
      601 taagtgtcga tccctctgaa tgtatagttt ttgaaagacg atatggattt aattcagttt
      661 caggaatgac a
//
LOCUS       KCPA01002033             704 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 223880tic ultra-conserved element locus
            uce-7967, sequence.
ACCESSION   KCPA01002033
VERSION     KCPA01002033.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 704)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 704)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..704
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="223880tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>704
                     /note="ultra-conserved element locus uce-7967"
BASE COUNT          213 a          142 c          142 g          207 t
ORIGIN      
        1 ttttaagtgt ggatttgcac aatctcagat atcagagctg gcttcacagt caaaaatgct
       61 cagaaggcag cagcataccc atgcagcatt ccatttgctg aatcatccat gctgtagctg
      121 acctagggtc ttttgtacct aatgttttca gggagataat tttcacagca tcagggagca
      181 aagtcaatcc taggtcactc gtccagtgta gtttcctttg tactaaatcc tactttcaag
      241 aaaattcttg ccatggttca atggtattta acctatcata taatatccag gtttactgtg
      301 ttagaagaag cagaacagta ttaagctttt cccacaagcc tgtgattgca tttgacccag
      361 taacctgtat tagattaaca tttattctac aactccacag caagccttgg acctggctga
      421 gcagcagttt atagaggaca ctaaccattt ttacaagtgg agcaggaaaa gggaattgaa
      481 tctgagggag taattccaaa caagtatgtt gctgcagcgg ttaaattgtt tatacgagga
      541 gttggggaat tacatctgac tgacctctct ttttatctgc ttaaaagaca aagtgcaggt
      601 ctccatggca agtgctaact cctgcagaat gcagtataaa aatgcatcat ggcaatagaa
      661 cctcaatccc tgtaccttca aaggaattta ggcaaaaagg tttt
//
LOCUS       KCPA01002034             461 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 223985tic ultra-conserved element locus
            uce-3419, sequence.
ACCESSION   KCPA01002034
VERSION     KCPA01002034.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 461)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 461)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="223985tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>461
                     /note="ultra-conserved element locus uce-3419"
BASE COUNT          134 a           94 c           76 g          157 t
ORIGIN      
        1 tgctgggttt ggtgttttgt gtctggggct ttcagtctat ttgagtgaaa atatgtaatt
       61 ccaggccact cttccaatgc atcacagtca ttttctgcac tttagttgtt tttctctcca
      121 tttttcccac aaaataaaac atcattacag caggtttaaa gtgcacttta gtgcctgcaa
      181 tcttcccatg ctattcttta atatttcatc attaaatagc aaaataacct gatatgatcc
      241 taatttagtg ccaattacac tgcattgatc aaagtgacct tttcatactg gagcacaaaa
      301 atcaatcccg ctgcacaaca aatgtcaggg ggatgagagc aacatataat ctgtgacaat
      361 caaaacatta cttacaaatg aaatcaccaa tgacctgcat gccaaggcaa tttctgcata
      421 atgtgcactg gttttatttg cagcttttgt tgggattttt t
//
LOCUS       KCPA01002035             537 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 224092tic ultra-conserved element locus
            uce-2350, sequence.
ACCESSION   KCPA01002035
VERSION     KCPA01002035.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 537)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 537)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="224092tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>537
                     /note="ultra-conserved element locus uce-2350"
BASE COUNT          161 a          104 c           95 g          177 t
ORIGIN      
        1 gatcaaggtt agatgctgag attaaaatag atcctaatac tgcctgcctt tcatcacagc
       61 ttgcatgtgt gctagttgct cagctagtgg tttgcaagtg aataattaag cattattcct
      121 ttactggtgt gttacagcaa taacggtata tccaaacaag catccctcga caattaaaac
      181 aattatagca taattaggcc tatttcaaag ttttcttaag taatttgaca tgccaaccat
      241 ttacatttca ggtttttatt ggctgaaaag tcagttgtga aacacaaaca cacctgtcag
      301 caattaaaaa ggaagaagta gagaactgtt caggaaataa tatctgtgct aattaaaaac
      361 attagttaaa agcttcctgt ttgttcctcc agttgcccca aggagtgacc tcaacccatt
      421 ttttcatcgg ttgctaacat ggtttcccat ctcctgcttc cagtgcacaa actaaggctc
      481 ttggactaat tttgcttgtt agggtagtct acttttgcta aaatattggt tctttgt
//
LOCUS       KCPA01002036             736 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 224201tic ultra-conserved element locus
            uce-553, sequence.
ACCESSION   KCPA01002036
VERSION     KCPA01002036.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 736)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 736)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..736
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="224201tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>736
                     /note="ultra-conserved element locus uce-553"
BASE COUNT          212 a          164 c          150 g          210 t
ORIGIN      
        1 tttcttagct attagctctt tattttgcca gtcctcagcc tgacccagtc ggtgaagctg
       61 caagttggca gctgtgattg cagtacagat ttcacacagt gtaattactg cagtgacacc
      121 aggactgaga ggtacaaaga aaaaaagagg ccctacaggt tattagcact aaacactggg
      181 agaaatcaaa cggagagtca atgcgtaatt tcgaggccta tcaagcctca tcaggaacag
      241 cggggaggaa agtgcttcac ttcatcatct cactctctga cttttgttga aaattacagt
      301 aattaaaaaa gagctaagta cttctcaggc aaggggtctt ttctttaccc atcacctttt
      361 agttggctgc tgattttgtg tgaccttttt cttggctctg tctatcgcag tcaacacaga
      421 tctttgttga atagctctct aaaacctaat tactatctgc tgggtgattc agtattgatc
      481 agaaaaggtg gcacagcaaa ataagagtac cagcactgtg gcctcagcaa tcgaaaagta
      541 attctagccc catagaaacg tcccttccat cccacttatt agaagcagct gtgatgttgc
      601 caaatcgata cacaacattg aattgcttct ttgactaaaa agctccccta gaactcgggc
      661 acaatcagtg gcctctgact tcaaaggccc taatgctgta tttgagtgaa tgaattccct
      721 gttggcaaat atttct
//
LOCUS       KCPA01002037             519 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 224302tic ultra-conserved element locus
            uce-6158, sequence.
ACCESSION   KCPA01002037
VERSION     KCPA01002037.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 519)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 519)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="224302tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>519
                     /note="ultra-conserved element locus uce-6158"
BASE COUNT          116 a          125 c          154 g          124 t
ORIGIN      
        1 agccgtgtct ccagcccggg aggcccgggg aaggaaagcc ctggcggtgc ccccaccgcg
       61 cggtcccaag tccgctttag cagtcaggca tggagttgaa tggaagttgc attcttttgc
      121 acgctctgct ccaggaggca cttttctttt ttccatggaa gggaaatagg tttgagagca
      181 aattggggga aagggagaaa taccagggga gcaagagcca cattatgttt ccattttcct
      241 ttaatgaagg ccctgtggag gtgtatttga aaacacaggg tctcctatgc cttcaaggag
      301 ggtgagaaca ctgtgctggc tggttccagg gccatatgca gcgtatggtg gccaatgaaa
      361 cggggcctgg ctcgttctct tgcttgtctt ggcagcctgc tccatggctt gcattaccag
      421 ccctggaaca caaccactgc caaactgtga gtgtgtatgt gtgtgtgttg gactccaaga
      481 gctcagcaga agcaaatgct tctgcagctc agaccagga
//
LOCUS       KCPA01002038             783 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 224414tic ultra-conserved element locus
            uce-7643, sequence.
ACCESSION   KCPA01002038
VERSION     KCPA01002038.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 783)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 783)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..783
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="224414tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>783
                     /note="ultra-conserved element locus uce-7643"
BASE COUNT          232 a          142 c          175 g          234 t
ORIGIN      
        1 gaagtcacca ttgtaaccag ggctggaatc tgagatggaa ttatgcatga gggaggaaga
       61 gattgtacaa aatattcatt taatttgaat atgtatagga agtgaatgaa agtgttgggc
      121 caaatcctgc tctcatttac attaatgcag ccccacaacg tctgctgagg gtagaatttg
      181 atctgacatt agcacaaact aacttttaca tttgccagat tcttatttgc tcacagcgtg
      241 tgaccagcca gaaatataaa taaatcaaat ctgtttctag gaagattcca gcaaccattt
      301 gaaactttcc tgctttgcat tacaagaaaa gaaggggtag aaaggggaga ggatggaggg
      361 ttacataaat gagagcaggt gcggtcgtgc agaagtaact attcagcata tgtaagtgca
      421 gttggaaaat cattgtcttg cagagaatac ttgaaattgg tccctaatgg ccttggtttt
      481 tgtcatatgg tcttgattat caggctaaaa ttgcattgcc gatgccttta gtgtgaacga
      541 gatggatgaa taattattac gtgcgctgaa tacctctctg cgaggaggaa ccaggacatc
      601 ccctggtcac cacagctacc atttcacctt gctgtcagga aaactgcaag tggccaattc
      661 atcacttcct tattgttctt aaaatatatg tttatagtaa taagtgttca taaaacccca
      721 gcgttgcgag gttatttttg ggaccccgtt tgtaaagacc ttgctttatc tttgtgttcc
      781 tgc
//
LOCUS       KCPA01002039             636 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 224522tic ultra-conserved element locus
            uce-1314, sequence.
ACCESSION   KCPA01002039
VERSION     KCPA01002039.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 636)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 636)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="224522tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>636
                     /note="ultra-conserved element locus uce-1314"
BASE COUNT          158 a          154 c          115 g          209 t
ORIGIN      
        1 aggccccacc tcgtgcaact tcacctcata actccggctg tgcaatttga gctcgatgct
       61 aatgcattga ttttgcttta atagaatttt gttgtcaatg gccggtgctc agcacggtgc
      121 aggcttcaat cttaacccat ctgaaggctc tgctcgtttc cagttgagct ccgttcattt
      181 ccagttgaat aggttaagca aagacagacc tcactgttct caattcactt tatgatcctc
      241 ccatcataaa aaataatatc agcaccttgc ttttcatgtc agaactacat ttgagctgct
      301 attccctatg cccatgagta aatcccataa aagccgcccc gttgtactgt cgctattttt
      361 ccttgtggat gattgattga tggatgagtg ctgacacttc aatgaagcta tttcgactgc
      421 catctcaatc cgatgatgtg aggggtatat tttctgtcca tgcctcatta cttcagaatg
      481 acattcctgg aacttcattt actttttccc tccttccctc aagcgccata ttttttccca
      541 tctaggttat gcatgccata aaaaaagcaa tttgctatta tatgtggcat aagggcaaca
      601 ctttccctag gaggtaaata agaagggcct tttttt
//
LOCUS       KCPA01002040             485 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 224629tic ultra-conserved element locus
            uce-3976, sequence.
ACCESSION   KCPA01002040
VERSION     KCPA01002040.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 485)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 485)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..485
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="224629tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>485
                     /note="ultra-conserved element locus uce-3976"
BASE COUNT          138 a          111 c           94 g          142 t
ORIGIN      
        1 gttctccctt gccctccact ccagggttcg aaagtgtggt tttgtcaccg tcctcgtggc
       61 ttccaaagct tttttagcca gcccacaatt accagagctg gctaatagac catccccttg
      121 ataaacttcc ggggaaccca ggacgagcct ggtcctttaa aagtttatcc ctgtggcacc
      181 atcgtgtaag catccatatg ggacagtaaa aatggaagac gacacattaa atgacattat
      241 tataaaatgc aatactcttg gaatgatccc ttattaaatt aggctctatg atctgagatg
      301 aatttccccg atccctaatc catcaccaga gaaatattaa aagataggtc tcaactggca
      361 ttagaatcgc actcagtctc tactttcatt attttgaatt agggtgctac tggggggaag
      421 cctcttaatg agaattagag tgattcactg gcctcctttt ggattttgac aagtaaaata
      481 ttaac
//
LOCUS       KCPA01002041             464 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 224736tic ultra-conserved element locus
            uce-2769, sequence.
ACCESSION   KCPA01002041
VERSION     KCPA01002041.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 464)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 464)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="224736tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>464
                     /note="ultra-conserved element locus uce-2769"
BASE COUNT          143 a          107 c           66 g          148 t
ORIGIN      
        1 aataactcca gccaagtcag ggcaaagaat atgtctagtc attaattcta cttgtatcat
       61 ttctcattcc tcaaaatggc aataaaagga tccctcctta gaaatcagcc tggccatggc
      121 catactcatc tccataatag cacaatttcc aattcacgcc tcattttcat taatgtttct
      181 agccataaat ttttaagcat atgataaaaa atttctgaag cggcataaaa ctaacatgaa
      241 gagggagttc attagtatgt gaccctaatt agaaattcca tattagcttg ccatttctac
      301 ttgtgcatat ccagcagcag caggcctaat atgctgtgta ccagttgtac atttgtttca
      361 agagctcttt ccctccctca tttttacaca atttctatgt ttcccctgct attgaataag
      421 tcaacagaca actgtatcac agcagcacct tttgtgtcac aaat
//
LOCUS       KCPA01002042             418 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 224838tic ultra-conserved element locus
            uce-6969, sequence.
ACCESSION   KCPA01002042
VERSION     KCPA01002042.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 418)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 418)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="224838tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>418
                     /note="ultra-conserved element locus uce-6969"
BASE COUNT          127 a           80 c           73 g          138 t
ORIGIN      
        1 gaaagcaatt tctaaaataa agacatagca gtattcttat cttttttcct ggtacgctgc
       61 tctatgtctc ataaagattc tggcagagtg agaaaacctg gtcagtatca gagtctttcc
      121 tgggacctgt ctgcagtgtc gacaagcagc taagctgaat attaatacac tctccatcat
      181 caaaagctgt tgcataccca aaggatgaaa aatattttaa tcagctttca gcttgtctag
      241 tagaagtcag tttattcctt tgggattata catctatgtg ctcaattttt gtcttcacgc
      301 tctctctcca tacatattac ttttgaaact agcagcaaag agcctaaatc tgctgttttg
      361 ttgggaaaag ccagctaatg ctatgattca attacagtat tttagattta agaagaaa
//
LOCUS       KCPA01002043             699 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 224949tic ultra-conserved element locus
            uce-4507, sequence.
ACCESSION   KCPA01002043
VERSION     KCPA01002043.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 699)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 699)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..699
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="224949tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>699
                     /note="ultra-conserved element locus uce-4507"
BASE COUNT          249 a          125 c          129 g          196 t
ORIGIN      
        1 tcaccaaatt taaattaaag tgacctcttt taaagcacat tactaaaagt actatgtgga
       61 gggaaattta atatgaatgg ttaaaatgca tggaattcag attttactgt caaacagctc
      121 aattaaacaa attgaatttt taagcaacaa aagggaattg aatcaaatta gaaccagagt
      181 gggatctgaa atgtggacat ttatgagtga tagtcacagg gccctccagc agtgagtttt
      241 ctttatttgt tgcctcagca gttagagggg ttggcaggct gcaacacaaa aggataaaaa
      301 tgttcaccat tgaaacacag tttttggctc ccaataaatc atctgtcact tcatcacagc
      361 ccagtagata atgagcaata aagttttcac actcaggcaa tgaggaagca gacacaagaa
      421 atacagctaa agctgctgtg tctcttttct gtaaacgcaa ggtgctttgt gtaataaatg
      481 acctctggat ttctggaaaa gagtaattcc agcctcggta aaataaacca tttggccaaa
      541 tctaataaca ttacttagtt cctttaatga aagaaataat cacattatat atatgagcta
      601 cagccatcta taacaggaag agattccagg gtattacctc tgaagttgtc tctctattgc
      661 cagcaaagca cattgctgaa aatacaataa agctgcaca
//
LOCUS       KCPA01002044            1019 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 225058tic ultra-conserved element locus
            uce-736, sequence.
ACCESSION   KCPA01002044
VERSION     KCPA01002044.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 1019)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1019)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1019
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="225058tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>1019
                     /note="ultra-conserved element locus uce-736"
BASE COUNT          310 a          201 c          183 g          325 t
ORIGIN      
        1 taaagttcag ttttttacca gctctttgaa acaataattt tttgtcttca ctctgagaga
       61 ataaagcatt actctttgtg agtgatagca atctggtttt ctgtcctaac aggaatacat
      121 taaccaggaa gctctctgca catgattgta tttcttagct tagaaaagac aaccattaaa
      181 acatatcaat gaaaaataat gtctttcttt aaattaacta atatctacgt ttaatgaagc
      241 tcagtttata gtgatgggtg aagtgttttt cttccagcct aattatgtgc acagcttcca
      301 gacaacaagg agtgtcttta acattagata agaacctagg cttttatctc aatcaatagt
      361 ctttagcctt tgaactcatg tcagagaaag accagtccgt cacattcagt tctacctgac
      421 ctctttcttc ttaatgcaca ctgccattta cagaaggaaa acacacagat atatatgacc
      481 aagtaaagta ttcggggcat tttgcacaca ggggggatgg gttttatggc tgtagaaacg
      541 ggtgactgaa atgatgatgt taaaattttc ttgtttcctt tcactgggct ttgtgtatct
      601 caaaggagcc ccatatggtg ctctttgtcc gtgtcattac ctcgttacag ccgctgtctg
      661 ccagccaaag gtagaacgct gcagctgtag acagcgatac aactggaatt gtctaaggtc
      721 aacagtgccg taattacttt aaaatgtcag cgtacaataa aatacaacag ttcatctggc
      781 agaaagcaaa ttagctttga ccatagcgta attacccttt tctcagcacc attagaagag
      841 atcaaatctc cacattcagt gtttgaggaa aggccatcag agtacactct acctgacaag
      901 gatgcacatt tgccattttg agatgtaatt aattgtccct ataatagaaa tttttatatt
      961 tgactctgga attgaaatgc gtaataacct ggcttcttca tatttaacca tttccactc
//
LOCUS       KCPA01002045             751 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 225170tic ultra-conserved element locus
            uce-3455, sequence.
ACCESSION   KCPA01002045
VERSION     KCPA01002045.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 751)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 751)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..751
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="225170tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>751
                     /note="ultra-conserved element locus uce-3455"
BASE COUNT          210 a          157 c          140 g          244 t
ORIGIN      
        1 ggttctctga tggaagcttt aatttgtgct tagggcttca tggcagccct actagcaaag
       61 gtgccttggg gacatgctaa attcatatgc tgtgacacgc agccgtgtgt gtgcagaggt
      121 cacactaaga cagataaatc agatggtagc atcatcagtt tttctattat ctgccccact
      181 ttgtgccaat ttcctcgagc ttccccaaca cctcttgctt tgctgttctt ccttaagaca
      241 tgggatgggg atttgtcaaa gtcaatgagc actttattac agtgagagtg ctcagtaatg
      301 aacaattcag caatttaatg agattctgta gatctgtctc cagcctgtcc atcaagtttc
      361 acttctataa agcaccctga cactaatcct ctggcatacc caatcttcac cctgggctga
      421 atattagatt cttccatggt atattgcatt accactataa ccttagcaaa aatgatgaac
      481 ttaactacac ttgaggcaat atagctggtc tgatttgatt ttcttctatt gggttgacta
      541 cgagggaatt acttatttac taagataaag cccagtttct tattgccttc tgaatgccca
      601 aattggtaaa tatttatatg tgtcttttaa tccattctgg ggacctggaa tatttataat
      661 atttattcct ggtttcacaa acagaattaa aaagatgcat gcacattttg cctgcagcag
      721 aaaactagtt aaaaaattct tcggaacagc a
//
LOCUS       KCPA01002046             755 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 225282tic ultra-conserved element locus
            uce-6020, sequence.
ACCESSION   KCPA01002046
VERSION     KCPA01002046.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 755)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 755)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..755
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="225282tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>755
                     /note="ultra-conserved element locus uce-6020"
BASE COUNT          234 a          149 c          141 g          231 t
ORIGIN      
        1 tttttgaaag ggtaaatact taatctagca tgttatttcc agttaagtct tgaaatatct
       61 aactgttgca ggtgcctcat agataattaa gtagcttagt gtgaaacaat ataattaaac
      121 ttttaaaaag gcaataggag caaatttccc acaacaccaa cagtgtattt tgcacttacc
      181 cacaggagac atctcaggaa ctccagcagt gtagggacca tccagaaatt ttggctcatt
      241 gtcattgatg tcctgaatct taatgacgaa ctcagactct ggctccacgg gtttattagt
      301 cagcctatct agtgcttgtg ctcggagcgt gtagtaggcc tgctcttctc gatccagcct
      361 ctttgtagca tgaatatccc ccgtgttctc atcaataatg aaaatggaac ttgccccttc
      421 gcctgacaag atgtatttga tggaaccatc tcctttatca acatcagagt gaagctggtg
      481 aaaaattgat gagagatgag attaacttac aagatagtca gtgacatgga gatataattc
      541 ctatgttgag aagtagtaca ggaaatgtta ttgttcctgg aaacataagc tgaatgttta
      601 tcacacacaa catttcatta gaatctgcaa tttgctcctt aggcaagaaa acttcatttt
      661 tatgctaaat tttaacatag gcaaactcat gcccgtgact tttaaacaca ttgctcactt
      721 cagcttataa tcctactgaa gggtgagact tcaaa
//
LOCUS       KCPA01002047             739 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 225388tic ultra-conserved element locus
            uce-2591, sequence.
ACCESSION   KCPA01002047
VERSION     KCPA01002047.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 739)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 739)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..739
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="225388tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>739
                     /note="ultra-conserved element locus uce-2591"
BASE COUNT          228 a          150 c          125 g          236 t
ORIGIN      
        1 ttgttacttg caggatccca caagttgagt tattaagaag caggaggaaa aagaaagaaa
       61 ctgctcagtt tcttcttcac tttgtgccct catcgcacct ttctactgtt ttcataaaga
      121 aagagtgtaa tggtttatct attgtttatt caaaaccacc aacagaagtt aatagacagt
      181 tataaactaa ttgagtgcgt ctgtagtgct atctcctcat tcatctcgct tattcgattt
      241 agctctgtta gtgttccata tggtacagtg cccctgctgc taggaacagt cattcattgc
      301 cccctgtaac aacaggaagc taatagttta actgttcctc taaatttgtt tgacaaaact
      361 gacatttagt acgtcacgtc acgttgtcag taatctgcaa tttaccctta ggcaggcagt
      421 ggatgctcat tttatttacc tctcttagtt aaaagcataa ttaatattcc actctgaaac
      481 aaagattaga gatttgacaa acattgcaat ttaaattctc cattatagca aacattaaaa
      541 tcaaacacac acacccgatt gcataaagga catgtgtagc tgtaatttaa ctttttagtc
      601 tttaatacca caaactaatt tctgctgtca gtttaatgag gtggaaaaca caaatcttgt
      661 tgcactctgt gcacacaggc tgggacagtt agactgcaga gagcttgaat cagtttgcct
      721 cacaatgttt cagccaaaa
//
LOCUS       KCPA01002048             533 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 225495tic ultra-conserved element locus
            uce-3597, sequence.
ACCESSION   KCPA01002048
VERSION     KCPA01002048.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 533)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 533)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..533
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="225495tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>533
                     /note="ultra-conserved element locus uce-3597"
BASE COUNT          160 a           95 c           84 g          194 t
ORIGIN      
        1 tacaccttga ctgactcaaa gaactaaagc aaagttgctc tttcttgtac ctgtgctctg
       61 agcaaacctg caaatctttt cctgccatat ttagctcaca aacacaccta cgtatacaaa
      121 acttcctgca atacatctca gtgagtccac ctagtttaca actcagaaat tgtttgtgaa
      181 acatttgtct gtacacattt tatattttgt acatttttga tgtaacatat cttgtaaata
      241 gacagaaaca gtgaaataaa tcatctgaaa atttttgtag tctttgtaaa accctaataa
      301 taagtatttg gtgtcatcgg acttaactgg atgatgtatt ttctattggt ttattgttcc
      361 tctagcttgt aaaccagctt gcttgcaggt gtgcacactg tatctgtcta aattatttct
      421 ttgccattaa agtggaatta tttattgaaa acacagtctg gtgtttttgc agtcagaact
      481 gcttaagatt tcaaatatat gagcaatact gaaggatgtg atttttctgt att
//
LOCUS       KCPA01002049             487 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 225601tic ultra-conserved element locus
            uce-7695, sequence.
ACCESSION   KCPA01002049
VERSION     KCPA01002049.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 487)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 487)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="225601tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>487
                     /note="ultra-conserved element locus uce-7695"
BASE COUNT          141 a           85 c          116 g          145 t
ORIGIN      
        1 ggtttgccat ggctaaggaa tgtggctttt tggatagctg gtcaacatgt taaaagaagt
       61 cagggggttt tgttaacagg tattggtaag taataatagt ataaactcat ttaatagtat
      121 gtagtctgtt gcatggttac ccttaaacat ggattcaaat cgagtgaaat gtagccagaa
      181 ggcagcttgg ttccttgcca tggcaaaata acgagcagat cccagcagtt gacgtcgcat
      241 ttgtaaagct gctttgtcat gaagtaatga agcagttgga gagagattcg cctgttttaa
      301 aggaactgac taacacaagt atcccgtcta tatctgaatg ctgtctctag gtgtaagccg
      361 tggtttcgcc ttcgtggagt tttatcactt tcaagatgct accagctgga tggaagccaa
      421 tcaggttgct tcactcacca agtctagata ttcctgaaaa tggaacaagt ctgtacagtt
      481 taacaaa
//
LOCUS       KCPA01002050             547 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 225709tic ultra-conserved element locus
            uce-3903, sequence.
ACCESSION   KCPA01002050
VERSION     KCPA01002050.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 547)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 547)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="225709tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>547
                     /note="ultra-conserved element locus uce-3903"
BASE COUNT          160 a          134 c          102 g          151 t
ORIGIN      
        1 agtaatagag ggattgatta ttcaagtctc tgaatcaaca tattggggga ggagttatat
       61 ctttctccca ttcccttaca ctttatttaa aacctgccag cctctctgag taattcgcca
      121 atcatggaaa cattgaccct agttttggac agggagagta tgaaaaaaaa gtaaaagcaa
      181 aatcccatac ctcaccaaag aaggacatct gtttctaact tcagcttttt atttttttat
      241 ctttcatttt ttttgttggt aaatctccca gacaacagca gttctgtaga gagtttaaat
      301 atgaaggaat ggcaggacgg gctaagggca cttctaccga acattaacat caactttggt
      361 ggactgccca atgcttcttc cccacgccaa ccacagtgta ccaacgtcca acactgccac
      421 caccgacagc ctgaattggg acagccctgg cagctggatg gaccccgcaa tcatcacagg
      481 taaccgtttc tcactccttc agctccactg gcaaaccatc aaatgggtat ttggcacaaa
      541 ctgattt
//
LOCUS       KCPA01002051             594 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 225819tic ultra-conserved element locus
            uce-2975, sequence.
ACCESSION   KCPA01002051
VERSION     KCPA01002051.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 594)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 594)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="225819tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>594
                     /note="ultra-conserved element locus uce-2975"
BASE COUNT          164 a          132 c          134 g          164 t
ORIGIN      
        1 ttatacggga tacaaaaaca ttgacatgag gataggaagc agcttttaat tttttctccc
       61 tctatttgag aacaagggct caggacctgc tgccatgtcc tagcagggtt ttcactcctt
      121 ctgtgcactc ctcacttggc tgccattcca tctgactcca aaagaagcga gtacaaatta
      181 aagaaagaat gcagccctaa cgcctacacc cagaagcttt caaaacagaa ggctgctaca
      241 cctgtgggga tagaacaagt gtatcagtgt cctgggctct gccctggctc gtctgccttt
      301 gttagctgga atgtgccgat gaaacaatca ggtgcagtag gcgcgtggca gcctgcttaa
      361 aaaccgattc tttggagaca gggagtgggc tgtgaatcat gcatccacat aatctgatga
      421 taacaatttt aaatgtggtg attagtgtat aatggaaagt attgtgctat ttggtatggt
      481 ttgtctgcca ctgcactacc tagcatttca aaggtcccat cttctatgca aaacctgatt
      541 cattctagta gcaaaagaat aggagtgttt aggtacttcc tcactcgcac agca
//
LOCUS       KCPA01002052             828 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 225923tic ultra-conserved element locus
            uce-2012, sequence.
ACCESSION   KCPA01002052
VERSION     KCPA01002052.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 828)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 828)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..828
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="225923tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>828
                     /note="ultra-conserved element locus uce-2012"
BASE COUNT          249 a          126 c          160 g          293 t
ORIGIN      
        1 ttcattggtc aaacttttaa taaataaata ttcctctcat atcatgagca ttagagctct
       61 ttgtttgaca atatggaaca tttaatgtag cttctttcat gctttcctgt gtagcatatt
      121 tctctttagt aaaattaggg ggtggggaga caaattgcgg taataagggt ctgaaaggtg
      181 tgtaaaacat acggcaaata aagtaatttt ccagtgagtc tgtgatattg ccatttcctt
      241 tagcagtgtt gagtctctat aatagaagtt gctgagggct tagagtacta gaaaatataa
      301 aatacctatg ggacatattc cagtactgta cattaaattt gaggatttta catgtgataa
      361 agtatgtcag tgttgcttac agggaattcc agtgatacct cagctttctt ggacttatta
      421 taaatccttt gttggaatta ttgcggctgg ttcaataatt cagattagcc ctcatgttta
      481 ttaatgcact acatctgtgc aaacaacatg tcaagcagag agtttattgt aattgcctga
      541 gcaaacagaa cctgaaagaa gcaatttcca gttacaatgt gctatgacaa gtaatgaggt
      601 aattggcatt ctgtcctgat tacttccacc ttccttttca tcaggtctat attgtgtgtg
      661 atagatagtt ttataagaaa tgaaggtgtt tgataatatg gtctgctgct gcttaaggtt
      721 agtgattaaa gacaatcata attttctctc agagatctta ttagctttaa cattatttat
      781 tcatatgtgt aagatgtggg cccagaatct ctttcagtac tatacata
//
LOCUS       KCPA01002053             322 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 226020tic ultra-conserved element locus
            uce-3030, sequence.
ACCESSION   KCPA01002053
VERSION     KCPA01002053.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 322)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 322)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="226020tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>322
                     /note="ultra-conserved element locus uce-3030"
BASE COUNT          103 a           52 c           54 g          113 t
ORIGIN      
        1 acccactggg aatattgatc caatctatgt aaatgtgtat tttgtaacta ttctgatttt
       61 atagataagg taatccttta taaaaacttc catgttgtaa gtactcctgg actggggagt
      121 aaaagagctc taatgtaatg taattatttc ctttcaggga atatggagcc attgatgatg
      181 tagatattga tctacatatt gatgttagct ttcttgatgt aagtaatcta atcacagaat
      241 tacataatga acattaatac ccatttaatt tcgctacaca tcagactctc aaccgctgat
      301 attcacaagt gggtgtcaca tt
//
LOCUS       KCPA01002054             704 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 226130tic ultra-conserved element locus
            uce-7740, sequence.
ACCESSION   KCPA01002054
VERSION     KCPA01002054.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 704)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 704)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..704
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="226130tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>704
                     /note="ultra-conserved element locus uce-7740"
BASE COUNT          188 a          133 c          139 g          244 t
ORIGIN      
        1 ttcatggcac actatgctgg ttagaaaatc tgactgaaag ttgaactggt gctttgtgtc
       61 agaagctttg cttttagagc cagggtaatg tgcagaattc acatgcaaaa tctggggagg
      121 aaagagctat gcattaagtc attgtatatg atttaaatca tagcatatac aatagatttt
      181 tccaaaagaa aatgcacagt ttctttcaga cagaagcacc agttcatatt atattagcta
      241 ttacaaatct aatgaatatg tctttatttc tttctcgggc cttctgatgt ctattcttca
      301 attctctcat ctctgatctt caacctttga cctcacctgg ctgatcagat ggtgtttcct
      361 aaaatcaatc atgggtttct ctctgctgat cagcagctca ttaaacgccg cctcattaag
      421 gtagtgcttc atctcactgg agtctggttc ttctttacat tcagtttact ctttgctgta
      481 cctcagatgc cttcttatag caggttgttc acctgaaaag aaagactgtg ggtggctctg
      541 ctaagtgatc cacgtttgag atgccttttt ccagcggatg tgctggaagt ccatgttggg
      601 gtgtcttttc ttttttagag gggaaggtaa taagttttga caactctctt aaagttgact
      661 tttacaaatt aatatgaaga gagttagcta attgtcacta caaa
//
LOCUS       KCPA01002055             670 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 226242tic ultra-conserved element locus
            uce-6956, sequence.
ACCESSION   KCPA01002055
VERSION     KCPA01002055.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 670)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 670)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..670
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="226242tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>670
                     /note="ultra-conserved element locus uce-6956"
BASE COUNT          221 a          110 c          113 g          226 t
ORIGIN      
        1 gagttgatgg ttaacttttt gacctttaag aaattatagt ttgacatgaa ttttaacttt
       61 cctggctaat aaaattatca tgatagaaca gcccaagtaa ataatagata caataactct
      121 tctttgccta ttgtgtgctt ttactattca taatttttag gaccatagat attagataca
      181 cttacgtaag acttaacgaa cagtaattat cttttggctc aagcaaaagc ccaaacgaat
      241 gctaagctgc attatcgctt ggcttctgac atgagctgat aatcagattt tcttgcttaa
      301 atccatggtg cttgaacaat gctacccact gtctgtcctt cccgatatta cccttaatta
      361 gaaagaacag aaacacaaat ctgaattatt tcaaaatctg gtttccatgg tcagtggttg
      421 gaagggctta actttattac aaataaacct ggctttattt actaatgaaa tctgaaatgc
      481 tgggcctgta atagtagata gtctaatggt atagtgttta tatgctgaaa aatcttgtgt
      541 gggcaaagta ttttgtaata aatcgttaag taattgaatt atgattcttt tatccaatta
      601 ataaagcaga aaaggagacc cataggaagc cctataccat agtttaggcc aagtaatgac
      661 acattgttct
//
LOCUS       KCPA01002056             604 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 226352tic ultra-conserved element locus
            uce-4384, sequence.
ACCESSION   KCPA01002056
VERSION     KCPA01002056.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 604)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 604)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..604
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="226352tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>604
                     /note="ultra-conserved element locus uce-4384"
BASE COUNT          206 a           77 c          107 g          214 t
ORIGIN      
        1 tcaaatatgc tttcatttta gggcagaagt gctaaatatt tggagcaata ccgttgtaat
       61 gtgtacaaat gatgaagtcg gttttctgat tttccttgct agttatttag ttctgaatct
      121 gccattattt gtctaagcac agctgaccaa gcaaaactgt gttttaaagt ggctttatgt
      181 tttgataaat gtgatctggt tgaaaagtat tttccactga atgcagagct taatagaaca
      241 tgctgacata atagttttaa tgcattttgt tgaaaatgtg tgaacaacca gaatagcttt
      301 tgttccttca taattggctg taaaagtaga tggaaacata accattacat atggaaatgt
      361 gtgaagagaa agaaataaca tttctgttga atatattagg aattgcattt cctagtttaa
      421 aataagcatc tgaaatggat gcatcttttg aaattggttg tcaaaataaa aagccttaag
      481 tggaatgttt gtcatattat ttttatcctg agttaaacaa cacaattgct aaaggaaatt
      541 gtgcaacctt aataaatttc attttaatat tttttgctca ctaagcagaa aaataaaaga
      601 actt
//
LOCUS       KCPA01002057             415 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 226455tic ultra-conserved element locus
            uce-6957, sequence.
ACCESSION   KCPA01002057
VERSION     KCPA01002057.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 415)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 415)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..415
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="226455tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>415
                     /note="ultra-conserved element locus uce-6957"
BASE COUNT          120 a           75 c           95 g          125 t
ORIGIN      
        1 acagcaaggt cattccatgc ttgcattgtc ctccagggag atccacatgc cagcagagtt
       61 aattacacta acagccacag aaattatatt ggcccaccac tggcctagtg agatgaatat
      121 ctccactcac agggggatgt taatggtatt tttattaact ggtgacctgt tgactgctat
      181 tagaatatag attgtatgca taaaccaggt cagggtactg aagatatgat tatagagcaa
      241 ttactgtgtc agccagtgtg gcttataatc agagctggca aagagctttt ggaagcctga
      301 aaactgtttt tggagtccaa caagaagaaa cagctttgga tcaaagtgtg tattgtgcct
      361 ttgcttcttt ctggaatcaa atgtctgatt ttttttgatt aggatgggca gtcaa
//
LOCUS       KCPA01002058             328 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 226555tic ultra-conserved element locus
            uce-6476, sequence.
ACCESSION   KCPA01002058
VERSION     KCPA01002058.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 328)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 328)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="226555tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>328
                     /note="ultra-conserved element locus uce-6476"
BASE COUNT           85 a           81 c           56 g          106 t
ORIGIN      
        1 gcttctatac aatctctgct gggcagacca ccaacttggg gagcgcagca gccgagccct
       61 ctgcgagtgc cttcctggct gccgaaaaca gagcttgtca aaaaaaaaac aaatccataa
      121 tggcctgagg ctcctctcca atctattttc tgctcagctg gttttaaatg aagttattat
      181 gagtcattaa aacacccgca agcctgtgga agtcagccaa ttacaatttt aaatttagcc
      241 tgttctctat cccattctct tgttttcttc ttttgcccac atcaagccgc ttttggattt
      301 ttattattgc caattattat tattatta
//
LOCUS       KCPA01002059             619 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 226658tic ultra-conserved element locus
            uce-6397, sequence.
ACCESSION   KCPA01002059
VERSION     KCPA01002059.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 619)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 619)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="226658tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>619
                     /note="ultra-conserved element locus uce-6397"
BASE COUNT          218 a          102 c          121 g          178 t
ORIGIN      
        1 aaaagaaatg aggcagattc aaatagactg ccatgtatat ctcaggcaat gaaagcttaa
       61 aaatacaaac agtagaatgg gcaaatcaag tacatttata tcatattttc agactcatcc
      121 tctggattct cagggcaagg tggaagagaa ttatctttta atactgagtt gctttaaatg
      181 tgaacgaggc aattgccaca aaagtctctt atttgctgct tttctggtct acacgtgtgc
      241 acgcagagac acacatgaaa aatcagcctg ttgtcttgca agtgttactt atcatattaa
      301 ttaaaatctg gtgacacgat aacaccagca gctgtgtggg aaagcgaggg aaattaacaa
      361 acgtttgatt tgttgtgttg ctaatgtgac acttattata caggtcacag taaaacaata
      421 cctcagccaa aatatgctaa tactggtgga gaactgttgc agttgtaaaa acattgatgt
      481 ttattataat gagacaaaat agcacattac ctttagcaga gtgaattact gcttctcggg
      541 gcaaagtatc tctgaaggtt taataattca aaaccacaga gacagaataa agtgaaattg
      601 ttatacttat aaagccagt
//
LOCUS       KCPA01002060             558 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 226766tic ultra-conserved element locus
            uce-2575, sequence.
ACCESSION   KCPA01002060
VERSION     KCPA01002060.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 558)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 558)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="226766tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>558
                     /note="ultra-conserved element locus uce-2575"
BASE COUNT          147 a          137 c          103 g          171 t
ORIGIN      
        1 cccccactgc cttcccggct ccaagcctct atcccacatc ccagccttgc acttcagcat
       61 ctccagaaca caaacctccc cgtgtgggtt gtttggagtc acagctctgt ttgcaaatga
      121 gcttgggggc tcactgggta aaaaaagggc atgcttggtg aatcccattt cacttcccca
      181 gtgagctgaa aaactcttgg ataatgggtt atgagttgta gatctgtttg attgcattgt
      241 tgcaaagtgg gaattgtttt gcaacataga ttcttaatca ctgaggcatc tgtgattgaa
      301 tgtgtcgaaa attggttgaa attgaaagtt aactatactg cagacagctt attcttgtgt
      361 ataattgaaa ataaattcta atactcttct tgaaaagggc tgccaggagg aaatttccat
      421 ccttgtcctc tctcctccaa atccacaaat gttcccctct gatccttttc ctctccatct
      481 taaacccaat ctctgcacat cactccctgc atcctcagac ataaaatata gaacttgcaa
      541 atagttcctt ttggaatg
//
LOCUS       KCPA01002061             728 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 226877tic ultra-conserved element locus
            uce-4110, sequence.
ACCESSION   KCPA01002061
VERSION     KCPA01002061.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 728)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 728)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..728
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="226877tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>728
                     /note="ultra-conserved element locus uce-4110"
BASE COUNT          254 a          147 c          120 g          207 t
ORIGIN      
        1 accttagaaa caactgctat tcagaaagat gaaagcaagc gagctttcaa aagtacattt
       61 acactcacag acacatcacc cctcatccta ttcctcagtg gtttcatcaa ccttacctga
      121 atgtacatta tgtcaataaa attctacata tatcattgat tttgcctatt acatgcatgc
      181 aatgaaaaag gaacttaagg ggtgactgag aaaagtaatt ctctttccaa cctgaggaaa
      241 ctttagacaa atttgccttt gataatcgac tgaacaagct gcactgcaag catcaaggga
      301 tggtgcaggg atatctagca ggtgctgcag tttatcacaa aaccgtctaa aataattgga
      361 agtgacaacc agcactacca caaatgattt attagtcttt cactcagctt ttcagcttcc
      421 tcagggccag aataaataat ttaccaactc tgtatcttcc aatcattaat tcttccctgt
      481 gcatccaaac tacatttaac tctgctgggt tcagtggaat taaaaacaca atatgaagac
      541 atttccccca agtatagtat tatctgactt tatctaaaag taaaattgtc aatcaaaatt
      601 tgtattggtg atagaaagga ttagagctag caactgaagt taagttacaa aatatctgca
      661 gaataaaatg aaagctaaac tgatgagata tcaacaatga aatgctccca ggggtcaggc
      721 gtgttctc
//
LOCUS       KCPA01002062             636 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 226990tic ultra-conserved element locus
            uce-8030, sequence.
ACCESSION   KCPA01002062
VERSION     KCPA01002062.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 636)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 636)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="226990tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>636
                     /note="ultra-conserved element locus uce-8030"
BASE COUNT          180 a          133 c          113 g          210 t
ORIGIN      
        1 tcctaaatgc taactgcccg acaacgaggc ccagaatgca cctttccctc tccacccacc
       61 ctctgcatga cacaaactcc aagttcccaa attgatggtg tttatgtttg aaacattttt
      121 ctgatgtctg gctctgtcaa gactaatttt agcatttcta aagctgggta aaaatacagc
      181 ctcattactt tgatgtcaga gcatagttta ctattagtat attctggggt ttatcatttt
      241 agtcatgttt aacacagcta cagcaggcat gcactattaa atctggttta ttttacattc
      301 ctgtccgaaa ttatttattt ggaacaattt cctctctatc aaaagacacg gctaatgctg
      361 agttttaatg tgttatttac acacaaaata acctatttac aactcagtat ctgccgcagg
      421 gagaatgaat ggggcagtgc tcccttcatc ctgttgtatc tgagtttaac aatctggatt
      481 gctaatagaa ccatttatca cagggtggta atttatttta tgttagctgc acaggtctcc
      541 cttcctctga tctatggaaa tactttgtat ataatgaagt tcaacaagtc atttggtgta
      601 aacatgggga agccaagctg cagaaagact ctggct
//
LOCUS       KCPA01002063             564 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 227100tic ultra-conserved element locus
            uce-2276, sequence.
ACCESSION   KCPA01002063
VERSION     KCPA01002063.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 564)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 564)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..564
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="227100tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>564
                     /note="ultra-conserved element locus uce-2276"
BASE COUNT          152 a          136 c          148 g          128 t
ORIGIN      
        1 gccctgggga agaagcctgt caggcatgac agcagtgcca tctggagctg tgagcagggc
       61 caggggcaga gcacagctct caagctgaag agaggtgccc ggctgctctt gggctcaggg
      121 gagggacagg agccactcag caaatggctg ttcaggacat tactatgctc cttaagttaa
      181 tgagaaacaa gcactgccag aagaaaacat ctcttatctg ctttagtgcc acagcacatc
      241 ggcttcagca taaaatttac agagcttgaa aatggggtat aaacattatg ggtaaatttg
      301 gcagaaaatg tgactgactc ttatctggtc atgaataaat aattttcaat taccagccca
      361 ggcactgcta ttatcccaca cagggaactc ctctgaagtt tgttttgtgc tcgagtacac
      421 aagcatgtgg gtggcaggag gggaggtgta ggctcaggca ggctgtgctg ttcccctgaa
      481 acatccccca gcaagcagct gccccagcat ttgcagtatg ctgctctcct ctcggttaca
      541 tcatccccaa aagacaaact cggg
//
LOCUS       KCPA01002064             584 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 227208tic ultra-conserved element locus
            uce-8006, sequence.
ACCESSION   KCPA01002064
VERSION     KCPA01002064.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 584)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 584)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..584
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="227208tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>584
                     /note="ultra-conserved element locus uce-8006"
BASE COUNT          194 a          106 c           97 g          187 t
ORIGIN      
        1 gacagtattt atttcctaat ataaacaaaa ttactatttg gattggagga gcatgaggga
       61 ggagtaagag aggattaatg tgctggctgt tccccactgg ggccaccaat aacaatcaat
      121 tccaaacagc agtcacctca catcatctaa cagcttgaat cgccgatatt caaagattct
      181 ctttttttgt tcagattaaa tatcatttaa attgcatcca tttcgtcaga gacataaggt
      241 cagaattgat tgaatatgta ctacctgcac ataatgattt ccagtttttt acaatcatgt
      301 gctaatgctg cacagtaatg gcctatggat gaagagacag atgtactacc agtcattcgc
      361 tacacatttg cattaacaaa tcatcattta attgaagccc atccaacaag tttatgctac
      421 ttaaataaag ttcctttcca taaaagatgc tgcaatgaca catggttgtt aactgcaagg
      481 taaataagaa gtagtattta ttttcttgtc actggtttag gtaagtatta aaatgtacac
      541 ttattaattt gtattttgct cagaaataaa ccacctgaca tcta
//
LOCUS       KCPA01002065             806 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 227318tic ultra-conserved element locus
            uce-15, sequence.
ACCESSION   KCPA01002065
VERSION     KCPA01002065.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 806)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 806)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..806
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="227318tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>806
                     /note="ultra-conserved element locus uce-15"
BASE COUNT          260 a          159 c          145 g          242 t
ORIGIN      
        1 ttatatgtat agtgtcatga cccaccacag ctttgtccca tgagatattt ttaaccaaaa
       61 agaaatccac aagaaactct ccctaaaaat tccattaata acctcttgta gcatgtatag
      121 gttgcagggt ctggaactaa gaatgtttta atctcttcag caaaacaatg tctcataatg
      181 atgtacagga ctattgctgc actgatgaag aatcatacat aattcagcac ctttcacttg
      241 gcaccactgt gatatcctca ttagcagtgg ctcacagtgg ctgtcagatg gtgtccatgc
      301 gaatgcaggc attatattgt ctttgagatg tgcagctgct tccatgacac tgccagtata
      361 taaaaacatg acgccagttt gttttattta gtgctaaacc ttccagtttg taaaaacaag
      421 gctgacacag agcctgacat gaggcagtga aaataattag ctctcatttt ctcagcctcc
      481 tatttccttc tccccgctgt gttctctttc cactaaacca ccacatgtca gtcgaaatgg
      541 gaggcaatta gtgggctcat ttcagtcccc acaactgtgc tgaaaagaaa gtatttatga
      601 tggcacaatg aacagctgaa agattaaata acatttgcct tttgaaaaga aaatgacttc
      661 tagctaaatg ggcaattttt gattattctc aaacaagctt agagtagttg gtttttaaaa
      721 tacaagaaag gaaaatgagt catttttagg tgaaagaatc aaataaaact tgacacagta
      781 atgcaaataa ctgatgtttt attgca
//
LOCUS       KCPA01002066             672 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 227429tic ultra-conserved element locus
            uce-6183, sequence.
ACCESSION   KCPA01002066
VERSION     KCPA01002066.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 672)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 672)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="227429tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>672
                     /note="ultra-conserved element locus uce-6183"
BASE COUNT          174 a          125 c          112 g          261 t
ORIGIN      
        1 tttgaaaatt atgatcacag ttagccagag aaagttcctt gttttccctt tcaaaaccac
       61 atgatccact tttttgcacg ttagttttct ctcagatggt tgaattattt attaattttt
      121 gtgtgtggtt aacaggttct ctcaaggatt gctttctttt aaactaatgt tcatgcatgt
      181 ttgtgtgcgt tctagttcct gtcatgtttt ctgactctac aatgtttatt acacttcaga
      241 caaatacccc agggagatta tgtaaaaaag ccgggagagg ccgactcttt ttatagcgac
      301 atgcctcctg gagtcagcac aaactctgca tctagttcta agaagaggtc tgcttttctg
      361 tcgcattttc agatttctac ctgttccatc acccattatt ccattagtca gaacatttca
      421 ttgttttgca gcaggtttga ctctttcttc tttctttatt ttgaaaaagc atcctttttt
      481 ctttgattac tgatttttct cctgtgtcct agttgctaat tagtatgatt aggccagaat
      541 caaaatttgc attttaataa aattttcata atatccctaa ttgatttcaa gtggacggta
      601 ataattagtg gctgctttaa tcatggtcat gtaatcaaag aaaaggaaca ttgtcttgct
      661 ccaatagtag tt
//
LOCUS       KCPA01002067             442 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 227539tic ultra-conserved element locus
            uce-4075, sequence.
ACCESSION   KCPA01002067
VERSION     KCPA01002067.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 442)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 442)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..442
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="227539tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>442
                     /note="ultra-conserved element locus uce-4075"
BASE COUNT          162 a           71 c          109 g          100 t
ORIGIN      
        1 aaaaagctcc agctccttgt actgtagcag gacttgcaca ttgcaaaaga ggaggagagc
       61 gcagtccagg gagaggttag tgaaaaatta gtagtgtagc cattgagaag aagctgaact
      121 gtcataaagt cttacacatg gagcgacggt agaaggcctt cattttgtct ttttccttcg
      181 gtctgttcct caaaaagggc agtcttttca gtgcacccac ttttatgtca tagcatgagg
      241 aaaaacggaa acagggaaat gaaagaaaaa aagggagaag aacagatgga agttaaatgt
      301 tgaaactaag gacagaaatg aatgtcgagt ttaagctagg aaaagctatc atgggtgata
      361 attgaaagta cactaaacag gaaaactgca ctaggaaaac ttccataggt aactcaaatg
      421 cactgaaaat tacagtgcag ag
//
LOCUS       KCPA01002068             714 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 227647tic ultra-conserved element locus
            uce-5221, sequence.
ACCESSION   KCPA01002068
VERSION     KCPA01002068.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 714)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 714)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..714
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="227647tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>714
                     /note="ultra-conserved element locus uce-5221"
BASE COUNT          216 a          143 c          104 g          251 t
ORIGIN      
        1 ttttaaaatt tcattacaga tcagaagtgt aacaattttt aatacaaatg taaggcttcc
       61 aagaatagta ttcttaaaat gacagggttg aaatgaagac agaaagtctt ctgtatactg
      121 cctgtaacct taacttattt taactgctga catcaaccca taaagtctgg gttttactaa
      181 aaatgagata aagaaaaagc atctttatgc tgaatttgca gaagttaaaa cctgtgatct
      241 tgaaccatat ttaactaatg aaagattatc ctaaatgaat aaaagaacct tatttcttat
      301 gcgctccttt ttggatgcca tgtcatcaca cttgtcctct ttacccagtt tgtctactgc
      361 ctccacagtg aagctgtagt tgtagttccc tttctttcct ctgtcttggt tgtatccttt
      421 cccccatttc agctcttctt cattccttct cataaacttg tcaaactcat agtgagttct
      481 atgctttctg ccatcatcca atcgatacct ttgtctttca ggttcttttt ctcgaaatct
      541 tctctccaaa tctctttgct ctttgtcact atcattttgt gacctaggag tatgtataaa
      601 aagaaagaaa atccaagcaa ttaacaataa aaaggagcag aaagatacaa gtcaaagcct
      661 tcctttgact agtataggta agttaaatgg caaggttgtt ttcttctcct taca
//
LOCUS       KCPA01002069             422 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 227756tic ultra-conserved element locus
            uce-2834, sequence.
ACCESSION   KCPA01002069
VERSION     KCPA01002069.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 422)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 422)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="227756tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>422
                     /note="ultra-conserved element locus uce-2834"
BASE COUNT          162 a           65 c           89 g          106 t
ORIGIN      
        1 attgaatttt ggtggatttc agagcatcta ttcatgtcta tcatgccatt aaagtcagaa
       61 ttagaggatg cacatgcatc acactcccat atacaattca ttgctgtgaa atacagagag
      121 acaagcatgc agattcatat ttatttgaga actttagttg tgaagcaaga cacacacaat
      181 taaagggtaa caaactcaat tcacagcaga gtgcagaaaa aagaaagtac agtactaact
      241 ctctgagagg attcaatttt catcatgtac ctttgaatgt caagttctga atgaagggag
      301 accaacatgc actgcaaaac ctgtggatca aagagagaaa agaaggggag ggggagagat
      361 aattgttaac aggaggagaa caatagaaat tagaataacc tgtacataat gaaagtatat
      421 tg
//
LOCUS       KCPA01002070             414 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 227861tic ultra-conserved element locus
            uce-785, sequence.
ACCESSION   KCPA01002070
VERSION     KCPA01002070.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 414)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 414)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="227861tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>414
                     /note="ultra-conserved element locus uce-785"
BASE COUNT          152 a           78 c           44 g          140 t
ORIGIN      
        1 agctctgaag tatagcaaaa cataaattat tacaaaatta acactataaa aatttatttt
       61 aagaatattt ctaaactcaa agggtctagc cttgtttata attgcttaaa catttttagt
      121 cttaaaattt gccttaaccc ttcttttttt aaaaaagaaa gtagtaataa tctccctatt
      181 tgcagtctct tgcccaagat gtaaataaac cagcatataa gtgcactttt aacactgtag
      241 aaataaaaat taactcctct gtactattgt tccagtacct agtattggct tcctgattaa
      301 tattttatta aaaaattatt cagtaatcct ataagaaaca ctgtcagtgc aattctatta
      361 atgcaagcca atccgctcaa ctcctaaacc caaactgctc accgaagtta tcaa
//
LOCUS       KCPA01002071             737 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 227970tic ultra-conserved element locus
            uce-2349, sequence.
ACCESSION   KCPA01002071
VERSION     KCPA01002071.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 737)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 737)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..737
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="227970tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>737
                     /note="ultra-conserved element locus uce-2349"
BASE COUNT          222 a          122 c          125 g          268 t
ORIGIN      
        1 gaaggaaaaa gaaattgctt cagcactgcc tccttttcat acttcatatc tctgaaagta
       61 gccagttaat tacattccat ggttactgct attgtaatat gtgcttattt gaagtgcaaa
      121 gataatcatc gattgtatac tcttgactac actattaatg gtttcaatac ccacattgtg
      181 tttacatttt actttataac taacacttag cctttgtggt tttaacatgt agtaattcag
      241 tgaattctgt aatgcccttg ctatttcatt ctgcggtatt aagtgttgtt tttctaggaa
      301 ggtcttgaaa tgtggggcat tatgtatgag ttatgctaat ttgttagggc aatgaataca
      361 ttaatttcat tagtaaatgg cctcaaagca ataattacca gtgtaggtgt gtcagaaacg
      421 atcatgttca gttttgccag ttaattatta agattttgtt ctaagggaca cagatttgac
      481 atccagcttc aatttagcca taaataaaag tctgaagtat attggatcta gccaagaact
      541 tgttttgctc ttagaaattc ctacattttt tctaattgtg actgccaata agatgccaaa
      601 ataattagtg ccagtgctat gaggtttata ctatacctcc caaaaaggca catcataatg
      661 aaaatagcaa ttgtgctttc tcattcctct caacttgcct tatgttacag aatgttgaat
      721 tattcaatgg cagtatt
//
LOCUS       KCPA01002072             549 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 228076tic ultra-conserved element locus
            uce-5091, sequence.
ACCESSION   KCPA01002072
VERSION     KCPA01002072.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 549)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 549)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="228076tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>549
                     /note="ultra-conserved element locus uce-5091"
BASE COUNT          151 a          124 c          110 g          164 t
ORIGIN      
        1 caatttctca taatcaggag aaaggtgtcc cctaaggtta ggagtgatct tgtcaaaaag
       61 gcagcataaa tttgcagagg taatcaccag tctatctcct tcccccactg tccatggaac
      121 tattaagtaa tatcactgtc taatcttttt tgtacttatt tattttgcag caagaaacta
      181 gtgttataaa cacccctact gtcaaaactt gtcatcctca ttacctcaag gcgggttcca
      241 tctcagttat tctaatttca tagtttctcg aatttacagc cgctggaaat tgagtacaaa
      301 atccattatc atttgtatat tttaattatg caaatgaggc agctcagctg ctctggccgg
      361 gacctgcagg gatgcctaac ttcagtctgg gtgattacaa tttatccagt cgagtcactt
      421 taattgtaac aagctaatta cattgttcca tttggtttta acaaaagaag aggagactaa
      481 tggcagcggc cccgcgttac cgccgcgtct gggcgaggtg agcggtgtcc ccacacacct
      541 gcgagggca
//
LOCUS       KCPA01002073             756 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 228186tic ultra-conserved element locus
            uce-921, sequence.
ACCESSION   KCPA01002073
VERSION     KCPA01002073.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 756)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 756)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..756
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="228186tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>756
                     /note="ultra-conserved element locus uce-921"
BASE COUNT          211 a          157 c          142 g          246 t
ORIGIN      
        1 agctctgcgc cattctccac tcccgctctc tgctttgcct tggggtaaaa atcatgcctg
       61 ggactggatt ttctagtctg cacattccat ctgagcatct ccaaccactt gtttgaacac
      121 cctgtaggag ggatccccac atttctctgt tcttgtatcc tcatccttgt tggttttaaa
      181 tacaattaac tgaggatgac aggaaggcag caaacaggta aacacagtcc cttcgaggag
      241 caggaaaaag ccacagtttg aagaaagtaa caaaggctgc atttgtgtat tttgctccat
      301 ggagctgaaa atatctagta aattgatccc gtgggagtaa taaatacaca ttactttatc
      361 ttgtacttca tgtcctatac ccctgagcct tgatagaaca acaccactta atagacttaa
      421 aaaaagagta attacagtca ttggttgtgt gatatttcag cccttccagc cctgcctgac
      481 cttctaattt agctcactgt gtctaactaa tgcatttata ttcatctttt atgaagcatg
      541 tgtagtacaa aattgacttt gcagccttta gcaagctgtc ttaccaggtt tgggatctgg
      601 ttagtacagt ggagtgtata gcatatgtac atttacagca gaattttgca tgcatatggt
      661 tctgatcatc tattattttt atccttttgg aaataaattt tttaaagctt ttattcattg
      721 cggcattatt tacagctaaa catgcaggca ggaaga
//
LOCUS       KCPA01002074             666 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 228296tic ultra-conserved element locus
            uce-6444, sequence.
ACCESSION   KCPA01002074
VERSION     KCPA01002074.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 666)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 666)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="228296tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>666
                     /note="ultra-conserved element locus uce-6444"
BASE COUNT          228 a          131 c          122 g          185 t
ORIGIN      
        1 ctgtagaatt cctgagatta tcaccttcta accaaacatg tcctttaggc acctatgatt
       61 aagcaagatt gaaatgtaaa gaaaccagaa cagaagcaca gtttgcctta tcctgatttc
      121 cgtgttctgt atttcatgac tgtgtaacga actaaaaaga cccaatgcca gatttagagg
      181 gatgagaagg agtgctccaa agtatctgtt ctatcctgtg ctcaaaaacc aatggtttgc
      241 aacaaaaaat ccaaaatgaa gatgtaagag gttagaccaa tgtgacaggg tcattaattt
      301 aatagacttc aaaagaggtc attaggatgt tgactgaaaa tctgccctcc tgtcgcagta
      361 acagcatgaa cagggcagcc acacactcat caacatcctg gggccagcac caaggctaga
      421 cctgttagta gattcatgat gaactaactg gtaattgatt gtgacatcaa ttacgaataa
      481 tctcatcatt ttatcggagt aggcttgtca aagttctaat taagatcaca gttcattcta
      541 tgtgcaggca gaatccacaa cacattatat tgcaataatg atgatcacaa aacagcaaat
      601 ccctttttat aatttgaaaa ttaatgatgg tgaccttata ctatatgaca aagacctttc
      661 attgcc
//
LOCUS       KCPA01002075             758 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 228408tic ultra-conserved element locus
            uce-98, sequence.
ACCESSION   KCPA01002075
VERSION     KCPA01002075.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 758)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 758)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..758
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="228408tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>758
                     /note="ultra-conserved element locus uce-98"
BASE COUNT          232 a          156 c          143 g          227 t
ORIGIN      
        1 tatatgggag ggaaaggatt aagtgcacac aatgtacttg aaatacatcc acagcatttt
       61 aaaagctgaa aataaaagct tttaagagat acattttggg tctgaaagga gaattgatac
      121 agaaagctaa cctggcatga ttttagggga tatatctaaa aagcctaatc attgataatt
      181 cacaatttgt gagcctggtg ggatttcatg cagagcacta gcctcactaa ggtaattggt
      241 gctattgaaa caacactggc tcagcagcat gctgctttct tcctcgcctc tgggcacagg
      301 aaggatcaat atttgttagg attgcttctt gttccaacaa tgtaagattt acaatacttg
      361 ctaggattct cactttgtct tcacacaact catcagtgga acccaattac taacctcaga
      421 caaacaacat taacatgagc ctctatgctt ctttattgcc cttcatccaa gtctcatttc
      481 agggtcttca ggcagtgcca ctataacaga tactacactt taaagtgtgc tccaaggaat
      541 aaattttcag tctttcatta ctcgtacctt gatttacttc atatcatctt gccgctatag
      601 acaaagataa cacactgtaa attacagcca tcctgtcttg tagtttcaga ggtaggggga
      661 aggcagggag tgatgctttt gcactacaat tagcactggg caccacagct tcattgctat
      721 catcactagt gactgaaact tgttttatca aagatgca
//
LOCUS       KCPA01002076             633 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 228514tic ultra-conserved element locus
            uce-3919, sequence.
ACCESSION   KCPA01002076
VERSION     KCPA01002076.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 633)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 633)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="228514tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>633
                     /note="ultra-conserved element locus uce-3919"
BASE COUNT          211 a          112 c          120 g          190 t
ORIGIN      
        1 tgagtttctg atgtgatttt acttttggtc caaagctctg ctagactgag ctgattctga
       61 aataagtgcc ttcaggaagc gtattggaat aacttgaaga atatttcttc tgtttctaca
      121 aataaaggaa agaatccaag ccacatctgt aatgttgaat ttcaggacaa ggtgtgcttg
      181 ttctatcaag gatatgccaa taattcaagg caatcagaag ggtacattac agaggaaagt
      241 ctgaaccaac aagctgtaca aacaaaatag caatcagaag atttaatgca tttctgatgt
      301 acatttaagg cattgacact gggccacaga tgtacatgtg ttgtgtttta tcttgttgag
      361 atatggcttg tgagaaccta ttatagcata tcatcaccca caagtactgg gcccagcaaa
      421 ggaaaaattc catcacacat tactcctgca gatatattag agaaacaaat tgtacttgga
      481 attgaaaagt cacaggctta ttctgtctta ataaattcct gccaaaaggc taagtgtaaa
      541 actagaaata cttcccaaat gttgttactg tattatcatc tctgacatct caagggctac
      601 taggggtata tcatttcaga gttctcacaa taa
//
LOCUS       KCPA01002077             747 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 228627tic ultra-conserved element locus
            uce-7223, sequence.
ACCESSION   KCPA01002077
VERSION     KCPA01002077.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 747)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 747)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..747
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="228627tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>747
                     /note="ultra-conserved element locus uce-7223"
BASE COUNT          251 a          133 c          115 g          248 t
ORIGIN      
        1 gagtatgtct ctgataaatt ttatttaaat ataaaaggta ataggcagaa aatgtagttt
       61 gcttacaagt ttcctttatg gtggtttgac tgtcactttt ctgcagattt atgataatca
      121 tccttgcaac aaaaacgttt acttcactgt ctaaataata aggtaatttg ttacagctaa
      181 ttactcaagt gcttccttaa tctcaattaa aagattcagg cttattttct acatttctgc
      241 agcagtatgc tccagaatat cttgttaatg tattcccaat cacatatttg ttaaggaatg
      301 catggttcat gcaaaactga aatgctaaaa tacatagctg caatcttaaa caatgattta
      361 ttgtgacatg ggatgtggga catttccaca gcttttgtga ttgcagtaat gaagctgtaa
      421 accaaatagc atgaaatgaa gcaaggcctt acaatttaat cagctcgtaa acagatctac
      481 tgcatcaagc aaatgacatt attatccatc cgaagtaaat catgctaatc tcaggagata
      541 aaatcaacat cattaatggt cacatgtcat attcatcaac actaaaccat cccttttgac
      601 agattaatcc taactacagc tcccacgatg tatggtaata gggcctgtag catacatttc
      661 attcagcagt aaggctaacc agcactctta gtctgctatt acaaagaatt tttttattga
      721 tttacatatt ttaaaatgca tttaagg
//
LOCUS       KCPA01002078             611 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 228738tic ultra-conserved element locus
            uce-3407, sequence.
ACCESSION   KCPA01002078
VERSION     KCPA01002078.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 611)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 611)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..611
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="228738tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>611
                     /note="ultra-conserved element locus uce-3407"
BASE COUNT          191 a          119 c          101 g          200 t
ORIGIN      
        1 catcaattag gagagcacac aaactcttag aaaacactgg agatttattt tgttgcctga
       61 aacgtggttt ctaacctgga aatacttcat ctctgcagag ctgtgttctc ccacagcgat
      121 ggagaaagct ttgcagctgt tcaggttaat gtgctcctgt ttctctgctg acatttaaac
      181 tcaaggatac acagcatttt tcaaagcttg attggcacac agaagattca ttgttaatct
      241 cctagtctat tactactgtc tttcataatc tacatatatt ttacaaattc tttagtaaga
      301 aaggctgtca gagcaaatga tgcatcaaat tcaaacaggc catcaagatt gctaatggat
      361 tttaatagca gctattacag cataatggta ttttcccaac agctgtttgt ttataaaatt
      421 ttcagtttac aagaccttta tgtccaatcc caggagacat ccgtcaattc atttataatc
      481 atttggttca acctacatgt aaatgctgtc ttatatatgc atagaagaca caagcaacta
      541 ccacagcaat gggggaactt tacaaactaa actaattagt gtgtactttt tgactttagc
      601 aagtgtttta c
//
LOCUS       KCPA01002079             565 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 228852tic ultra-conserved element locus
            uce-2576, sequence.
ACCESSION   KCPA01002079
VERSION     KCPA01002079.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 565)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 565)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..565
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="228852tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>565
                     /note="ultra-conserved element locus uce-2576"
BASE COUNT          183 a          100 c          135 g          147 t
ORIGIN      
        1 gctttaaagg ctttatgata tgtatgatac cagagagaag cagacaactt tgtttttaaa
       61 caaagacccc aggataaggg gcaatgtttt tcccctcaca ggtgatggag tacgtacaaa
      121 gaatgcagcg gataatggca gtcctgtcct ctgaacagat ggtgatggtc ctgttgctag
      181 gataaggcct gaagaattta gtttttaatt ccacattatt tgcctcagtg ccatgaatat
      241 ccctaggttt cctcaggcaa aaatacaaca aatacacaga aagagaaaga gaagtgacat
      301 gtggatagaa aaggagacag agcacgggaa aggactggag ccaggtcaat agaagctttt
      361 gggaaaatgt ctgctcagct gtctgcaatc acctgggttt gaaaggcagg caggaaggaa
      421 gattggtttg gcatgagaac gaggcctttg atgctttaga taccacagag aaaaatacac
      481 atttcttccc attagaagtc tgttgacttt cctaattaag ataaacatgt ttctgaagaa
      541 gttagctctc acagtactac atttg
//
LOCUS       KCPA01002080             410 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 228959tic ultra-conserved element locus
            uce-2100, sequence.
ACCESSION   KCPA01002080
VERSION     KCPA01002080.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 410)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 410)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="228959tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>410
                     /note="ultra-conserved element locus uce-2100"
BASE COUNT          143 a           65 c           58 g          144 t
ORIGIN      
        1 gggggaaatg ttagtcctta ttctttcact taaatcagtg ccaaaatcaa ttttgaaaaa
       61 ttgtctcaaa gttgctttca actcaatctg ggtgtttctt tactgctaga atatcacccc
      121 atacactgga atcgttatta catcacacta atctaattta aatgcatttt tactgtactt
      181 ggtttaatga atgtggaatg tgtcactatg aaattgcacc attaatttga taaataggac
      241 ttgaaggtat aattttttcc agcattgcag actaatgaag ctaaaataca tatataataa
      301 gaagtgtaaa taataaatta ttcttaggag caaaaaaatt aattagatct taccacaaat
      361 tgcatctcat ttttttacac tactgacttt caaactagtt ggaacatgac
//
LOCUS       KCPA01002081             553 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 229070tic ultra-conserved element locus
            uce-6185, sequence.
ACCESSION   KCPA01002081
VERSION     KCPA01002081.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 553)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 553)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..553
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="229070tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>553
                     /note="ultra-conserved element locus uce-6185"
BASE COUNT          199 a          105 c          135 g          114 t
ORIGIN      
        1 gtttttattg ctggggttaa aaaacatgaa tttgcattac atcctggctc ctgctgtaat
       61 actttagtct tgtttctctc tcgtcccctc tccagaacaa ctgatgctat cacagcctga
      121 tttaatttca aagacggatt gtgatttggc agtcggaaaa aaaaagccaa gttaatcaaa
      181 agtcaccatc tgctgtgttg ccatggggat attcctcccc aataaatgtg ctctttgcca
      241 aaatcacaga taacagcact ataaagggtg ggaggtggaa atcaaagaaa gaagttccga
      301 cactaaaaaa atgaaagagc aagggagaaa gagaagaagt gggagaggaa ggagcatgga
      361 ctactgtgaa aaatgacaaa tggaccaact agaaactaac aagcagctga tggtgacaaa
      421 gtgatggagg aagacagaca actggaaagg aggaaagagg agagacaccg agacaccctg
      481 ccacataata caccaaaaca acaagcagag ataagagaac tgccctcaaa gccttgtctc
      541 agggggaggg ggg
//
LOCUS       KCPA01002082             790 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 229179tic ultra-conserved element locus
            uce-937, sequence.
ACCESSION   KCPA01002082
VERSION     KCPA01002082.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 790)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 790)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..790
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="229179tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>790
                     /note="ultra-conserved element locus uce-937"
BASE COUNT          209 a          177 c          176 g          228 t
ORIGIN      
        1 tttggtagcg atattccctc ctcatcttta cgattgaatt ccctgtgttc ctgccgcgtt
       61 gatagttcgg gacattgttt tgatttgttt gtctctcaaa aatgacctaa agaaatctgt
      121 tgttaatcac atatcaacga gggagggatg attagttaat aaaaaccatg ccttgtgtct
      181 gtggaccaaa tggctaactc tggttctcag tatgctcctg aaaggctgtt cccatccctc
      241 agtgatgtag ccgcagccct ccctgaggaa tgagaagttc actattcact ctgtgcttgc
      301 atcacccttt ccaacatgtt cccactgata cattaaagga attaattgct cataatgatc
      361 tcaccatctg ttaacagagg ttcataccta caggctggtg gcatgtggtg gtcctattca
      421 gaaatcaata ggcaatgctg ggggaacgct ttcccacatt gccttccatt gcactctgaa
      481 aaggggagga gagctcagtg ttggccatct gctccttgtc tttctgtgca agagaccttg
      541 atgcagtcca gcctggctct gatctgactc cagtctgatt ggaatgtggc tgatctgaga
      601 gcctctcaaa gctgtgaaag tgagtcaaaa ggagatcccc attgtccagc agggctgaaa
      661 gaaaatgatc actttaaaat tcataactcc caggtgcctg ccatctattc atgggaaaaa
      721 ctctctgaac ttctcttcat taaaaagaga gggagtccag ctaaaaagag agaaaaggaa
      781 gtagtttgtg
//
LOCUS       KCPA01002083             576 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 229287tic ultra-conserved element locus
            uce-3884, sequence.
ACCESSION   KCPA01002083
VERSION     KCPA01002083.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 576)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 576)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="229287tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>576
                     /note="ultra-conserved element locus uce-3884"
BASE COUNT          169 a          139 c           95 g          173 t
ORIGIN      
        1 aaagtactga agccaaatga cgagctcttc tctcacatca acatttatat ggaatggcag
       61 ttgtttgtag agactgctct gcctggattt cagccacaga gaagtgcaga gataaaaagc
      121 cagcctcttc ccatattatt cccagtgaag gaataacaga aatgaagaca gttgtctcct
      181 gttcagctat tttcttcatc agaaattcat acaaacatat gtaacacaga aacacatacg
      241 tgttctgatg tgaaggcaac cagtctggga atagctgcca ttcctttttc tttaacttct
      301 gggaacatct tgaaacgtgc aatcaacata gcatacatgt tagatatggc accacctgga
      361 gtccacagta atatactgtt actttttcta ttcattgtaa tatcatttca gacaagtctt
      421 gctatagact gtaatactaa ccacagattc ttcttcctga tgcctgggct gtgtactact
      481 acacacaaat aacactggtg cttcctttca tccttattcc atcccttccg tccagtttta
      541 gcttcccatg tgccatcaag atacccccac cctaag
//
LOCUS       KCPA01002084             576 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 229398tic ultra-conserved element locus
            uce-7972, sequence.
ACCESSION   KCPA01002084
VERSION     KCPA01002084.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 576)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 576)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="229398tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>576
                     /note="ultra-conserved element locus uce-7972"
BASE COUNT          142 a          169 c          119 g          146 t
ORIGIN      
        1 cctctttgcg tgtgtcttgt catattttct tcagctgcta attgtctgga ctgagagatt
       61 ttaaacagcc gcagcttagg aaaaacgaaa cctgtctaag tgactattgc agcccgtaag
      121 cttcgtgctg ccgggtaaaa ttttccaggg gaagtgctct tctgatagtt ctcgagtcac
      181 taagtcaccc tccctcctcc tttccccacc acacactctc cccttgaggc ctgaatgcac
      241 ttgtggcaat aaaacattca tgcgacttgg aattttaaca caatgccatt tccctagttt
      301 aacctgaaag gaatgcacta gtcacaacag actacatcat cctgccatta agccctgcca
      361 aggaaccgct tttctggctg tgctgggcca gcgttgacgg gaaaggagta cacagaccca
      421 cacacagagc tcagaggggc cacctctgct tcctcagcct tctccagcaa cacccagctc
      481 ttaaccatga cccctggcct gtgtcagcac tgtgacagcc ctgtgatgca tgtgtcactt
      541 caggacttct gcagagtcac aacactgaac aggcaa
//
LOCUS       KCPA01002085             502 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 229503tic ultra-conserved element locus
            uce-4314, sequence.
ACCESSION   KCPA01002085
VERSION     KCPA01002085.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 502)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 502)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="229503tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>502
                     /note="ultra-conserved element locus uce-4314"
BASE COUNT          148 a          106 c           90 g          158 t
ORIGIN      
        1 tatctcttcc ttgtacagtg cagtttgaaa tagtgttttc cctttcctaa caaaactata
       61 gattttccag tgattatctg ccatctgttg atttcagtac ttcaattgct tcagaatcct
      121 ctgcaaaaca actcatgtat attcaaaggt accttcagct gagcaagtgt ccagctaatc
      181 cccttagcac acagggacaa ggctgccacc agctctaatt gattctgaaa tgaatccgta
      241 tagaaaatta gaaggtttgg attcccatgt gagcttcaat aaagggccag gatgtaagcc
      301 tgacagctga atggattcat aaatgaaaat ctgataagca gcttaaaagt gtacttaagt
      361 ccagaaatga tttgaatgct cttgttgtca tctagttaat tatctctgaa gatgagttct
      421 tgcagaggag aagatacgct agcctttcac agccttttct catcacatat ttattaaatt
      481 ccaccctcct tgccagtagc tg
//
LOCUS       KCPA01002086             889 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 229617tic ultra-conserved element locus
            uce-2054, sequence.
ACCESSION   KCPA01002086
VERSION     KCPA01002086.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 889)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 889)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..889
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="229617tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>889
                     /note="ultra-conserved element locus uce-2054"
BASE COUNT          322 a          164 c          133 g          270 t
ORIGIN      
        1 ttttcttgtt tactaacaca atttctaaca gcattatatg gtgtcactca gaacacataa
       61 catattgatt aagcatttta aaacatttta tcacattata aaacacattc agctccattt
      121 tttgatacac acaaatacaa cagatattaa gcatggaagg catcatgagt agatcataaa
      181 acaaatactt tggccaaaac cacagggcat tctatgcctt caatcaaacc acagcaatta
      241 atatgaaatt ctaaatacag aatataatgc cacataaata gtataacagc caagtcctgt
      301 ctaagaagcc atatgttttt tcccattgtt caaaaaaagg agatgacttc ccgtcactta
      361 tgtttctgat tagcaaggtg atttatgcca caatcactaa aaatgccagc aagtgaatga
      421 gaaaatgcat agtgactgca ccagatgtgc acaataaaca ggaatcccat tgtaatctct
      481 ggtacttagt ttatatgaag gtaatgtaag aaacactctt ggatatggca aagtcactct
      541 ttttttacat ttgactataa atgatatgaa ataaattgtg tgttttatac tttatggcat
      601 gcatacattg ataaattagg tacagttttg tatcccaact tatctacaag acaaacctgg
      661 ctaagatcat ggggattaat tgcttcagaa gtgtgaaatg cagcttttcc attcttttct
      721 gcacactcag tgaagaaaca atgattaatc actgtttaac tattctcctg aggatctaca
      781 agattgccaa agcaggactt atcctcataa atccaaaaaa cacaggttta gatttgttgc
      841 caacaactga aagaacatga actcagagcc attcgttatc agattaaaa
//
LOCUS       KCPA01002087             509 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 229726tic ultra-conserved element locus
            uce-7161, sequence.
ACCESSION   KCPA01002087
VERSION     KCPA01002087.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 509)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 509)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="229726tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>509
                     /note="ultra-conserved element locus uce-7161"
BASE COUNT          194 a           79 c           85 g          151 t
ORIGIN      
        1 atgagctgtc cacagtgcat ggagaaaaat ataagatata tttagaacaa tattttaatt
       61 tgcaatactt gattagatgg aaagaatgta atgtttagaa aatgtgatta agaagcttaa
      121 gtgcacagta tattacatga aaattctgat cataaagaaa ggtaatatct actcaaaatt
      181 ataatttctg tacttttgaa atcaactcag caagaattat ctacccatat caaattgtag
      241 cacttgtcaa aatcaactgt aaagcatctc aagtgctctt ctgaatcaac aaaacagatg
      301 tatagcgatg tgaggttgca ctgaaatgga aataaaagtg aactagatgc cagtcattgc
      361 ccttaatctc ttgaacccag cacttaacac agaggatacc acaggtcttt gggacactgt
      421 ttagaagggg aagaaatcaa gacttgaatc ttaatcgcat atgcaaaaac actctataaa
      481 attattttct ttctgctata gtagaatat
//
LOCUS       KCPA01002088             964 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 229840tic ultra-conserved element locus
            uce-1469, sequence.
ACCESSION   KCPA01002088
VERSION     KCPA01002088.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 964)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 964)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..964
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="229840tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>964
                     /note="ultra-conserved element locus uce-1469"
BASE COUNT          307 a          176 c          164 g          317 t
ORIGIN      
        1 agtgtcttgg tactagagga ttagagtact gtacacagct ctagcaagca gaatgaataa
       61 ttgaaatcca gtgcttttat gcttcactga aaaaaaacaa tatttcatgg cacataaagt
      121 tattcagctt atttgcatta aggttgaatg atcaccactg accaaaacag aagcaatgat
      181 ggtaccttga tgtaagcggc aaagaacata cataaatatt cttaggaagc aagatgtacc
      241 tgcatttaat cagtacttat taaaatttta ttccctatag ttattcaaca ggatccgtgg
      301 tataaaaaca taattacaaa aatcagattt gagctcattt gacaacagaa gggttttatg
      361 gtgacctatc tccaaatgtt cctatttgta attaaatgca gcgatcagca gtaaggattt
      421 tgaagctgtt ttagtagttc cgctattctg cttaacatgt ggcacccgta ataattaaaa
      481 tgatactaac acatgcacaa ttttatggcc cttatggtgc aacccattat gccaaataag
      541 ggcctctgtt ttcacagcat actgcacatg gtctcattac acccactttt cttttcctgt
      601 cttcacacta acaactgtta aagtgaatca acacacgaaa cgtactataa cagcttagtg
      661 tttatgatat gtgtgctgtt agtcagtgaa caggaaaatc taaacattta ctgtttatgt
      721 aaagaatagc gttagtgtta gtgaattctt gggtctgctt cctttattat ctagatcact
      781 aacataatga tgggtgtcaa tggtacctat atttcccctt tgctttgctc tcctgtgtag
      841 atttctataa gaattagagg aacttcacat ttgcagtcct aggaatgttt tctgttaagt
      901 agttttcctt ttctgcatta aagtgcagga aaaatatttc tatcataagc tcccaccata
      961 caaa
//
LOCUS       KCPA01002089             779 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 229949tic ultra-conserved element locus
            uce-5719, sequence.
ACCESSION   KCPA01002089
VERSION     KCPA01002089.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 779)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 779)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..779
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="229949tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>779
                     /note="ultra-conserved element locus uce-5719"
BASE COUNT          250 a          134 c          182 g          213 t
ORIGIN      
        1 gaaattcttg aactatgtcg agaaaaagag gattactccc ctttaatccg ggtgattggg
       61 agagtgtttt ctagtgctga agcactggta cagagtttcc gtaaaaccaa gcagcacacc
      121 aaggaggagc tcaagtctct tcaaggaaag gatgaagaca aagatgaaga tgaaaaggaa
      181 aaagctgcct gttcggctgc tgctatggaa gaggattctg gtgcatcatc atcttcatca
      241 tcaagaatag gtgataacac acagggagat aataacctcc aaaaactagg cccagatgaa
      301 gtgtctgtag atattgaagc agtcagacgg gtctatgata ggttactttc taatgaaaaa
      361 atagaaactg cctttttaaa tgcacttgtg tacttgtcac ctaatgtgga atgtgacttg
      421 acttaccata atgtgtactc tcgggatcct aactatctga atttgtttat tattgttatg
      481 gagaatggca atcttcatag cccagagtat ctggaaatgg ctctaccgtt gttttgcaaa
      541 gcaatgagca aactacccct tgcagctcaa gcaaaactgg tcagattgtg gtctaagtac
      601 agagcagatc aaattcggag aatgatggaa acatttcagc agcttattac ttacaaagtc
      661 ataagcaacg agttcaatag tcgtaaccta gtgaatgatg atgatgctgt tgttgctgct
      721 tcaaagtgct tgaaaatggt ttactatgca aatgtagtag gaggggatgt ggatacaga
//
LOCUS       KCPA01002090             300 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 230052tic ultra-conserved element locus
            uce-2982, sequence.
ACCESSION   KCPA01002090
VERSION     KCPA01002090.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 300)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 300)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="230052tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>300
                     /note="ultra-conserved element locus uce-2982"
BASE COUNT          103 a           61 c           54 g           82 t
ORIGIN      
        1 gtgttgcagt tacctgaagt gcctgagaag cacagaattt acccagttca agcactcaat
       61 aaaaaaacca gagcccttac cccagtcctg ttcatacaag gcttgggaaa ggcaccatga
      121 ttcacttatt ggcatgtgtg gatgcacaaa aacaagatgc tctgtgagtt ttcaacataa
      181 tgtacttcaa ctggggagac caaattatgg tttacacaaa aaaataagca tatatatctt
      241 ttcagtattc tattacacaa aaatgcattc acattaaatc tggagcaatt tgctgaagtc
//
LOCUS       KCPA01002091             600 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 230161tic ultra-conserved element locus
            uce-5025, sequence.
ACCESSION   KCPA01002091
VERSION     KCPA01002091.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 600)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 600)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..600
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="230161tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>600
                     /note="ultra-conserved element locus uce-5025"
BASE COUNT          184 a          108 c           89 g          219 t
ORIGIN      
        1 tccctcttct aacacacagg aaatgtctgc aatgttcttt tgaccccttt taatttcttc
       61 aaggtgagca tttgactctt caagctcctt cctacttttt taaagttcct gcaggtttgt
      121 aataatttag taggataaag aagattactg tagcagtcct tttttgttca attagtattt
      181 ctaatcacat tagacatgtt ttcagtatcc agagaggatg cctgatccct acagctatcg
      241 tgaactatta actttaatta aaatttacaa gtctaatgtt gttacatctg ctaaaagcat
      301 taactgccat gttaattacc aaaatgttaa tgttgcgtta aaatatgaat gttccctttt
      361 gacagttcat ctctggttta attatttatt ttggtagaat atctcctcgc ataaaagcat
      421 aaatgctgac tgaaataatg agacataatg ggaagacttc atctaggaag aaaacttaat
      481 actttagaat accagttgct agcagaaatt catttgcatt ccttcctgtg ttgaaaataa
      541 atacactgca catgcctaag atgttattta taattgcagc acattcttct gcttttacta
//
LOCUS       KCPA01002092             831 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 230274tic ultra-conserved element locus
            uce-6555, sequence.
ACCESSION   KCPA01002092
VERSION     KCPA01002092.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 831)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 831)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..831
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="230274tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>831
                     /note="ultra-conserved element locus uce-6555"
BASE COUNT          255 a          139 c          162 g          275 t
ORIGIN      
        1 agtcctatac tggaatgttt tgttacattg ccagaactta agtgagctgc attgctcagt
       61 gtttctgaac tgctctgctc tttattgaca attacaataa aatataaaga caatatttaa
      121 atcctgcctg attagtgcga acagaaatgt ttgggggaaa atctgaatta gttccacttc
      181 ataccagtaa atagtggatt tcagccttca tttaaaacaa aaggtaaatc tcatacccag
      241 aatccagtct gtctcaaaaa attatttcct tggaagtcta aattgggatg ccgatgaagt
      301 ttcagaacaa aacgggtatt tttatacttt gttcatttca tatttatcac tagcttgttt
      361 gctaattttc atttgcaaga ggcaattctt ccagctaact ggctgcctca atgggccact
      421 gatttctttg aagtgacagt ctgtaaatat gcataaaaaa gagatgcaat tagcgtgtgt
      481 gtggttcagt gcagcctgat ttcattggca agtttaccca cagtgttgat aagctacatt
      541 atctagaaaa ttggccgctg aaaaacagca cctctgattg ccagcaaagg ttccagataa
      601 cagggtgctg aagagaaata taattgaggt tgaatatgtt aaccaaggtg tcacatgctc
      661 cttagaagcg ctaatttatc agcatgttgg aatttttatt aacatttgga atgcatttct
      721 accacactaa tgaagtggaa ttggcagttc aggttttagt tattgtcatt tctgagaagt
      781 taaatgtaat ttctcgttag acacagttat gtaaatatat ttgttcaggg g
//
LOCUS       KCPA01002093             605 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 230385tic ultra-conserved element locus
            uce-6255, sequence.
ACCESSION   KCPA01002093
VERSION     KCPA01002093.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 605)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 605)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..605
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="230385tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>605
                     /note="ultra-conserved element locus uce-6255"
BASE COUNT          212 a          117 c           97 g          179 t
ORIGIN      
        1 ttcattctaa gcggagtctt cttgaagcaa aggagtttcc taactaaaag ttgactgaaa
       61 acattgcaga atacagccac gtagtatctt tgaacacatg ctttatgtta gagcatagag
      121 gctgcaacgt ttttcactgt tctctgttaa atcatgcatt cagttgtttc catttataca
      181 gcatcaaagc agttgaaatc caattgaaaa gtttctttag acaaccattg tgcaggaaca
      241 tgatgtcaat attaataaag gctgaatttc cccttggctc acttcttaca gataagcttt
      301 tcaataatac actgcttgca ccaaaggtcc aatgggactg ggaatagtaa aaaacactaa
      361 taaaagaatg ttgaatgttt ttatattaaa tttccccaca ggcaaactga aaagcctact
      421 tagactacgc caatcaacat ggcacttatt aaatgtaaca agagtcctgt tacaacagat
      481 ctttaaagcc cctaaatatg aattagaaag tatagacaaa agacaattac agatgtattt
      541 ctaaattgaa gccctggaca cctcacctga tactcacgaa tatgacacta tgtttgatct
      601 tcaaa
//
LOCUS       KCPA01002094             743 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 230492tic ultra-conserved element locus
            uce-7237, sequence.
ACCESSION   KCPA01002094
VERSION     KCPA01002094.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 743)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 743)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..743
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="230492tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>743
                     /note="ultra-conserved element locus uce-7237"
BASE COUNT          219 a          144 c          133 g          247 t
ORIGIN      
        1 aattacactg agaaccaata ataggggaaa ggttaatgat ttctgtaagc caccgaattc
       61 acccgcccct gtagtttacc aagaaaatta gggtttcttc atgctgagct tatgggaaca
      121 ctttacccat atttcaaccc ttctttcctc tgagatcttt gacatcgctg ctttcttgct
      181 ggataattta cattaaggac aattataaaa caaaaatata ccaccattca ggaaaatata
      241 caacttctta tcagagggat gtggatgttc ttcttgccag tctacagaca tggagattaa
      301 atttcagaga gagatttatt ttgtgctatt gtcctgttat tcaccagagg attgtgcaat
      361 gcaagtaatc tgatcagaat aatgcatagg gacatatttc agaaaaccaa taattgtggt
      421 aacgttgagc tctactaggt gccaaaataa agtccaaaat cactctccct cttttccaca
      481 attccttaat catggcatca taatgtgctg ctctgttgtc cattaaagcc acaagcttga
      541 agtaatcaat gctggacatt tggagattta ttgtaatttt agatctacag cacttttgct
      601 ggctgaaaag caaaattata gtttataggt gtgccatatc ttacatttta cagcttttac
      661 ttctttaagc cagcctggtg tgttcttggc ttgatttcct ttccacctga gtactgcagg
      721 cttttttatg atgttaggaa gca
//
LOCUS       KCPA01002095             679 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 230600tic ultra-conserved element locus
            uce-2369, sequence.
ACCESSION   KCPA01002095
VERSION     KCPA01002095.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 679)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 679)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..679
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="230600tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>679
                     /note="ultra-conserved element locus uce-2369"
BASE COUNT          170 a          154 c          171 g          184 t
ORIGIN      
        1 tttcagagtg gggctctaga ggctcgcagc catctttcag gaggctccag ttcaagctgg
       61 agttgttagt tacgctatgc aacggagcag cactcacaca aaaccaacat ggcagctggt
      121 gctggggttt cacggacaca taacggccca aatgccatct atttaagcaa ttttttcctc
      181 tctataggaa cttagcgcag cataaacact tgcaatcatg cacttcctag gatgcatgtg
      241 ctatcgaaaa gggaggtgtt aattgctgtg ctaattacaa catgattgct ttgcacttgt
      301 tttgcacttg caggtgatta aatttttaac gaagcatatt acttggcact gttagcatag
      361 ttaacacatt tatgccttgg gagaagtcct gtccctttgc tggctgcgat gctgttgtgc
      421 ttggaatgag cccctgttca gtgtcggtgg cagaaccccg ggttcctgct cggaaagagc
      481 agcagcctgt tatcatcagg ctcagtgtga cggcgccggc cagatgcaat gcagaaccca
      541 ccaaggtatt agctaaaaat taggcgaggc tgttgatgcc aatctcacag atttcattta
      601 aaaactatgc cagctctagc cagtcaggcg ggcggagggt gtgtggagaa atgacagcaa
      661 gttccccgtg atttatttc
//
LOCUS       KCPA01002096             751 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 230708tic ultra-conserved element locus
            uce-5379, sequence.
ACCESSION   KCPA01002096
VERSION     KCPA01002096.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 751)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 751)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..751
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="230708tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>751
                     /note="ultra-conserved element locus uce-5379"
BASE COUNT          224 a          132 c          152 g          243 t
ORIGIN      
        1 ctcataattc ttctattacc gtgttcatat atggtttttg aactatgtaa taaagaatgt
       61 atttgtttcc aggatcgcag ctctgctttg ttctgattgc agtgctctga ataaaaatat
      121 cctcctgtta cgtgttgtta tacaatagat tgctgctgca ccgaagctgt tactcagaag
      181 aaatgggctg tacaagggtg ttagaagtag cctgcaataa aggaagcgtt gtggtagaag
      241 caaaccagcg tagtggctaa attgtgaggc atcttgtttg gaaatcgaat ttaattaaaa
      301 agcactctca atctctagta atataactgc tttaaatttt cagacagtgg gagtagctca
      361 ccgttgccca agtatgcctc atctcccaaa ccaaacaaca gctacatgtt caaacgagag
      421 cccccagagg gatgtgagcg agtgaaggtc tttgaggaaa tgtcgtaagt aatgcctttt
      481 atatcagctg gtatctgcaa agcagtaaac ctgtttactg agcctattca actgcagatg
      541 aataaactat tccagctgat gggtttttca ggagcattat agtttgtgca gaagagaagt
      601 tcaagtgttt acattggtgt gaagattttt gtgcatttat aaaaaaatcc aagcaaggta
      661 catttaagca tttaaaacct ctttccatgt attttaacat ttaaaatttt catgacttct
      721 ccccttgtca taattgcatt ttgatgtgta t
//
LOCUS       KCPA01002097             491 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 230818tic ultra-conserved element locus
            uce-2187, sequence.
ACCESSION   KCPA01002097
VERSION     KCPA01002097.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 491)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 491)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="230818tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>491
                     /note="ultra-conserved element locus uce-2187"
BASE COUNT          118 a          127 c          120 g          126 t
ORIGIN      
        1 gaaacgattc catctgacac aataagagtg tcactctttc tcactttgca gagagtgctg
       61 cctattcctg atcatgacat aaaatactca cgggagttct tgaaacgctg agctccttgc
      121 cctgtactgt agatgtcact gctgtctggc tgtgcttaat tactgttttg gcgtctgaaa
      181 aatgcctaaa ggacaacgct tttgtgaatg tggaagaaac ctttttcttt gtgtttccat
      241 ttagaaggca gagagtgtgt gaactgtgga gccactgcta cccctctctg gagaagagac
      301 ggcaccgggc attacctgtg caacgcctgc gggctctacc acaaaatgaa cggtcaaaac
      361 cgacctctca ttaaacctaa gcgaaggctg gtaggtgtcg gggataaata aggcgaccac
      421 acacatcgcg cctcgtctct gcccagcccc tgcgtggagc tgtgtcactg ccgtgcctcg
      481 gggcacatct c
//
LOCUS       KCPA01002098             547 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 230923tic ultra-conserved element locus
            uce-4762, sequence.
ACCESSION   KCPA01002098
VERSION     KCPA01002098.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 547)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 547)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="230923tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>547
                     /note="ultra-conserved element locus uce-4762"
BASE COUNT          204 a           78 c           93 g          172 t
ORIGIN      
        1 agacttgatg caagcgagaa tagaatacaa aataatcagt cacaatgtta tgacttcatt
       61 tttcatttgt gttttcaagt ttgccttgaa aatcagagat tgcactgaag gaaaaaagac
      121 aatattatat caaagaaaaa gggaaaatta taagcattac ttatctttaa tgttttacat
      181 caaaatgaaa tttctgtgat atgtgtcatg tgcataaaca acacaggcag cttttgtctt
      241 tgttgaattt aaatgaaaag tccctctaga tattaatatg tggacttcat ttgttagcct
      301 gctaagtcag ggacttataa caaaagcttt gtaaacaaaa gattaaactg aatcgagctt
      361 tagaaaatga aaggaaaaca agagtcaaat aatcacagat cagagtgggg ctgcttagat
      421 tgaaatcact acaagctact ggagtggaaa atgtttaatt gaactatttc attacgcagg
      481 aagtttatgt ccctcttgta gaatccaaaa tatttgtatc agaaaatcca ttctccttct
      541 ttaaaat
//
LOCUS       KCPA01002099             728 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 231034tic ultra-conserved element locus
            uce-432, sequence.
ACCESSION   KCPA01002099
VERSION     KCPA01002099.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 728)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 728)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..728
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="231034tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>728
                     /note="ultra-conserved element locus uce-432"
BASE COUNT          211 a          146 c          159 g          212 t
ORIGIN      
        1 ttttcagcag ttttttgtta cccatctggt agaagaaatg gtagggctca agcagaggag
       61 atcttatgtg ggtgtaaacc aaggtcaaat gaaaaaagcg catctctctg tccctggtgc
      121 tggagacacg gagccactaa agcaaattag tttttattaa atgtgattgc agaaagtcct
      181 gggaaggaat gtgttaatga ctggtgattg aatgcagtgg tttgcaagct ctaagcagct
      241 ttagtgtctc ctaccacagc cctgatttaa aattcataaa tgctaatcct ccataattta
      301 cggtttaaaa agcagcccca ctcacaggcc ctgtggctac agctctgtca gagtaattat
      361 gccgccaagc tgaaattgga ctactaactg agatattaaa cagggtagga aatcctcttc
      421 cctggcagcc tacccaatta ttccaaataa gcaaacagat tagtgagtaa ttttccagtt
      481 aaatctggtg attggtgcca gaattgtatg ttaaatattc agaagtaaat agattaaaga
      541 tgaaatgtcc ccttttctca agcttaattt agtgtgtata ttaaaactct ccattgaagt
      601 gcaatacatt tgctttgaaa acagaacctt ccctggcttg tttgcacttg gggcagcgcg
      661 ttcattagct ggggcgctcg tgccgaggga accttgtgcc acattagcca cagtatcagt
      721 cctgctgt
//
LOCUS       KCPA01002100             422 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 231138tic ultra-conserved element locus
            uce-6310, sequence.
ACCESSION   KCPA01002100
VERSION     KCPA01002100.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 422)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 422)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="231138tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>422
                     /note="ultra-conserved element locus uce-6310"
BASE COUNT          114 a           87 c           71 g          150 t
ORIGIN      
        1 catcttccag tacattcctg ttgcttaaag aacatttatt ccagtattgt tttacccatc
       61 tttacttgcg gcttcttaaa gctgactgtt cttgcagggg ccatgtgctt ctcctagagt
      121 acaaaagtaa ggtctttcct tactaactgc agggtctata tattacacct caatgtacac
      181 actttgctgc tactgtttgt actgtctaca gtagaatttc cttatcttgc tcctggtagt
      241 gcattacagg caagcatgaa atgtaaagta tttatttaaa taaaaacctc taaattggta
      301 attgaattac ctccctgtag ctttagagtt tgtgacattt cttgaccttg ctagttcttt
      361 cattagatcc atgcaagatc tagtcatatg gttaaggata ttaagcagac acgactacga
      421 ac
//
LOCUS       KCPA01002101             648 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 231242tic ultra-conserved element locus
            uce-6806, sequence.
ACCESSION   KCPA01002101
VERSION     KCPA01002101.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 648)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 648)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..648
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="231242tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>648
                     /note="ultra-conserved element locus uce-6806"
BASE COUNT          212 a          115 c          136 g          185 t
ORIGIN      
        1 tttggtagta atagtacaca gagagaggta agaatcagtt ctagtgtctg cagacagcag
       61 tacatgcaag ttttccattt gcttctgcag aaaatgtcca atgtcaatgc acagaaatac
      121 gctaattgtt tatttttaga aacctctcta gaaagttttg catattctgt aatatcacaa
      181 aggacttctt ctgtttacag ttgcttagaa ctaagaagat agatatttac ccaagttttc
      241 ttggcttcct cttgctccct tgatattcta gagttccctg tggagagggc caagaacata
      301 cagtcaaagc aaagcagcaa gtcgttaatt tttaattcaa agtgattttg tgttgaatgc
      361 aagcagatgc tgataatatc agaagtcaca gcataatttt tttgatcaaa gggctcaagt
      421 gagcctgatg aagcatgcat cttgctcgtc tttgataaac cacatcaatt attcaccgtg
      481 aaggcagaca tcctgacatg aaagcaacag ataaagagca taagcacatg ttcaagacga
      541 gagcagaaga acgtgggggt ggggctggag gggctgaaac aggtattaat aacagaatta
      601 ttaactggaa acaaagccag taaaacagct ttattgccac tttgaact
//
LOCUS       KCPA01002102             532 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 231344tic ultra-conserved element locus
            uce-5087, sequence.
ACCESSION   KCPA01002102
VERSION     KCPA01002102.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 532)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 532)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="231344tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>532
                     /note="ultra-conserved element locus uce-5087"
BASE COUNT          126 a          128 c          146 g          132 t
ORIGIN      
        1 cgctgcaaat tgtacattta aacaatgaca cagtttttcc actccgtttg gcaaacccgc
       61 catcagcctc ggtgttgccc ctcacggcag caacggaagg gttaaacata aactttaaac
      121 attccctgtc ccgcagcctt ttccatgagc cgaggtgggc ttttccttaa ataacgaggg
      181 tggtcccagc atactctata tcgagacagc ttttcatcag ttgctcatca gcatgctaat
      241 tgctgtatga ctaattatgc cctgaattcc agttgatttt cttaatgaga cagctgggtt
      301 aattatgtaa tcgtatgatt acattagccc agagtgccct ggcgaaaagg aaggcgggcg
      361 ggagtgggat gtcaccggga gagggggcag ccgtggtcgc cgtaatgatc ggggaaagcg
      421 cccgcggtgt aagcaccgcg acacggagag tttcttccag cccgcaggac gagggaggta
      481 caactcactt ggtcatcgat ggttgtatcc cggggactga ggtcgggttt gg
//
LOCUS       KCPA01002103             455 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 231439tic ultra-conserved element locus
            uce-3540, sequence.
ACCESSION   KCPA01002103
VERSION     KCPA01002103.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 455)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 455)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="231439tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>455
                     /note="ultra-conserved element locus uce-3540"
BASE COUNT          129 a           91 c           99 g          136 t
ORIGIN      
        1 ttttgagagg ttattaaaat cgaaaaatgg tgtggcccat tgcttggtgg tttctcacag
       61 gctcggtgct cagagggaga ccctggctct caggcacgca ggctccctga agaggctggg
      121 caacctcacg tagcactcag aagtggcact tagactgtaa atattatatg ctgctgtaag
      181 aacatttgaa tggtaatact caagcaatta ctttcctttc aagatcatta aacacaaatc
      241 tgacttgtat tttaatagga ctgccaatgt atttaatggt gggcagtaaa gggtagtttt
      301 tttctaatgg atgaatgttt atattattat ccactctgag agaccacatt aggaggagcc
      361 tgtataacac tcacgtgttt tgcctcagcc tttttctcac agtattcaat gcatgttcca
      421 gcacgacggc aaaaaatacc acctgattat gagac
//
LOCUS       KCPA01002104             758 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 231546tic ultra-conserved element locus
            uce-5688, sequence.
ACCESSION   KCPA01002104
VERSION     KCPA01002104.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 758)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 758)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..758
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="231546tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>758
                     /note="ultra-conserved element locus uce-5688"
BASE COUNT          244 a          140 c          170 g          204 t
ORIGIN      
        1 ttttgttctg gtccctgcaa acctaagtcc atttcagcaa agaatggtac aaaagagatc
       61 agtgctatgt gctgagacag acaggctgac agtctcagct ggcataaact ggtgtagttg
      121 caggagggct aagttatttt accctagatg agaatctctt tattgtgtct ctcagaataa
      181 gcctttattg aaccaagccc aaggggagaa agggagagaa gaatgatgga aagaaagaga
      241 ccaaaaggta cgcagggcag aactacacaa aaccctcttc ccctatcact gattacaaat
      301 tattatacaa gctgagcccc atattgtata cttcatttac agtaattgta caacagctgt
      361 ataataggtg tagtttaagg tatgagtgtt gctcagagtg tagcttaaat gtccacagtg
      421 agatgtgaat atgaatatga atggtcctga ctgcatagta attggtggta ttatgggagt
      481 gaatggaaaa gctacatatg gatgaatggg tggggctagg gaagggcgca gcaccagaga
      541 ctaatggtag attttatttt ctcacataga tggcttttcc tttaaataat tagccagcag
      601 cagtagaagc aaatgaaaag aaagagaagg agactagttt ggcacactga agctctagac
      661 tcattacatt aaatcattcc aatttccctc tcttcacccc acctacctag acactgatcc
      721 atccacatta aacttgtaac aagtttcagc ttgcatgg
//
LOCUS       KCPA01002105             695 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 231657tic ultra-conserved element locus
            uce-638, sequence.
ACCESSION   KCPA01002105
VERSION     KCPA01002105.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 695)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 695)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..695
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="231657tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>695
                     /note="ultra-conserved element locus uce-638"
BASE COUNT          243 a          122 c          113 g          217 t
ORIGIN      
        1 aagccatttt caaaccctga aacaaattgg ctcctatatg taagtttaaa ttatccatca
       61 ccctgaagga ggattcaagc aaaatcgaag gccatcttga tgaataatca aggtaaattt
      121 gtcacatttt ttactgtgct gcatacttcc agagtttcat aaaaagatcc acataattag
      181 tttagcttac caggaagttg aatgacaagg tcaggctctt gccctttcag taaattagag
      241 aagattgcca taaattgcat aatataatga aacaccaatt tgcatatttg ctgctatatt
      301 aaaagggatc agttttagct cgcaaagcag aacaaataaa aacatgcatt ttaataactc
      361 aaattactcc caggaagtga ccctcagcag aaagcctgat tatcactact taattagaag
      421 ccttggaaat ctaaatcctc ctttaaatcc tattctgtgt acagtgaaag atgaagccat
      481 gagttttgtc ttagattcaa tatttactct ttactaatat gtttgcaggg gagactttcc
      541 aagcattatg aagacatgca ttaatattca aagaaagagt gcataaaacc tgtgttggct
      601 tgcaggtgca aagcaattaa caagctggca tttgcagtac ttttaattaa ttaattaaaa
      661 attcaaagct gactttcatt tctttaaatg tttga
//
LOCUS       KCPA01002106             602 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 231767tic ultra-conserved element locus
            uce-2694, sequence.
ACCESSION   KCPA01002106
VERSION     KCPA01002106.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 602)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 602)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..602
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="231767tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>602
                     /note="ultra-conserved element locus uce-2694"
BASE COUNT          220 a           97 c           85 g          200 t
ORIGIN      
        1 aaaagatgag ttagcattct aatttgttaa ttaattgtta atagaataga ctcaaatatt
       61 gaaaagacta tttaaaacac tttgtaatac tgctctaaag ccacccgttt tgatttcttt
      121 gatatagaac tacgaatcac cttaaatgag acaaccttaa agtagattat gtctgcaatt
      181 ttctctaatt caagtctaaa ttagagaaga cattttatga atgtatgcta tgctcaaagc
      241 taattgaaag caattatcaa agtggcattt tgtctgtgac tttaagatac attgtaagat
      301 aataaatgat tctcattatg taataaaaag gtcacatctt gcctttgggc tagtgacgtt
      361 aggagttttt caaaagcaat ccgagacatt ttctttagtg aactacgact aatacaagaa
      421 ccatcactta ttaaatatca gttgtcacct gcatagtacc cacatcagag atgggtattt
      481 ctttcaaaaa gaaacacctc ctcattaaaa actggaaaaa tatatctctt aaagtgcata
      541 cctgacattt tcaagttaaa atgaatatcc tttacttgtc attcactaat agtaaatgaa
      601 ac
//
LOCUS       KCPA01002107             663 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 231875tic ultra-conserved element locus
            uce-4086, sequence.
ACCESSION   KCPA01002107
VERSION     KCPA01002107.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 663)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 663)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..663
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="231875tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>663
                     /note="ultra-conserved element locus uce-4086"
BASE COUNT          203 a          139 c          139 g          182 t
ORIGIN      
        1 gttgttctct ctaactgaaa ctcaacactt ccaattactt taccagcaat ttacctccaa
       61 tcgcgggatt ttaagttaat cccctttgag ttctcagaac atctacaatg gcaatcactt
      121 tgcctattag ctgaacagcc tttcgggaga gctttctgct tttctctcaa aatattatga
      181 acttataaag ccaaatgcca caaagacagt aagggatatg cagtctgctc cgaagcagca
      241 gcaaggggcc tagcaatgag ggcagactaa ttttattaac ttcagggaaa cttcaaaaag
      301 ctttagggct ttaatgccag acagagacga ccccaaaagt cagtttaagt gctgcataaa
      361 caaaggatta gggcaagaaa aagctgaagg ctccttgcat ttcttgttta tattgtcata
      421 tgacctagta ggagtgggag agggctgcct ctctgacttt aatcccccat ggtgtacagt
      481 ggcgtttcag ttcactgacc tacattacga taatattaaa tttatgggca gaggtgcagc
      541 atcaaactca cttaaggaca ttgaaaaggg gcaggacggg aaaaataccc agaagagaaa
      601 ttttctggct ggtatagtct ccctctctca cttaggttag atcagcagct tagaaaagga
      661 ttt
//
LOCUS       KCPA01002108             363 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 231974tic ultra-conserved element locus
            uce-5493, sequence.
ACCESSION   KCPA01002108
VERSION     KCPA01002108.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 363)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 363)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="231974tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>363
                     /note="ultra-conserved element locus uce-5493"
BASE COUNT          115 a           84 c           65 g           99 t
ORIGIN      
        1 aaagaaagaa aagagaggaa aggggaactc gatttattct catttgttta tctctagatt
       61 ttcccccctt tctgcaaatt catttgaata gctttcaagc tgcaaaatgg aaatgtggct
      121 cctgccctct atttcagcag cagcgtcctg gcaacagagc aattttctat catcaaggat
      181 aaatggcatc gaacagaaca ttctgatgaa aaaaagcttt agcccaagaa gcccatgatt
      241 gctgcccttc ctgtctatca tccctttaca aaatcctctc ctccaaacct gagctgcatg
      301 ctgtcagagc taataatgtc ttctaaagaa aaggggaaga aacagcattc atgcacaatg
      361 ttc
//
LOCUS       KCPA01002109             665 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 232085tic ultra-conserved element locus
            uce-7703, sequence.
ACCESSION   KCPA01002109
VERSION     KCPA01002109.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 665)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 665)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..665
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="232085tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>665
                     /note="ultra-conserved element locus uce-7703"
BASE COUNT          239 a          124 c          108 g          194 t
ORIGIN      
        1 aaagggatgc cctattgaaa gagaaaagca gcattgtaat attctaaaag ctctaaaata
       61 aaacatattt aaagatatca atttaacttg aaaatcatag acaagaagtt gtactttatg
      121 ttctaaagaa tatcctgtat tcagttaata aacaaaagta tttaaatgtg cttagcacta
      181 tacagtgtta gcaaacacag ttgtcatcat cacactattg tctcacatgc actgtataag
      241 atttgtaaca agaagatgta aatgatcagg actaacatgg cattactggc ggtggtggct
      301 gacaaagctg ttgttgaaac tactccacac ttggcacatt tgagcgtcaa accgctatga
      361 ggctcactca tctgactgca aacaaacaga acacccacaa aaagaacaaa atattgaatt
      421 gtcaccaaac gttgctactg aaatttagct tttaaatatg atgtcatgca ttcaagatga
      481 atgctctata ttgttgcttt tctactttac gttagcttta catgttaata tggggcttaa
      541 tttcatgcaa actccatttc ttccatttaa tctaaaaaag gccccaaatg tgatcaagaa
      601 ctgctcggta aacataagca cgtgctagga tagacacaca aagtgaaatc cctctattca
      661 gacct
//
LOCUS       KCPA01002110             712 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 232196tic ultra-conserved element locus
            uce-3648, sequence.
ACCESSION   KCPA01002110
VERSION     KCPA01002110.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 712)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 712)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..712
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="232196tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>712
                     /note="ultra-conserved element locus uce-3648"
BASE COUNT          192 a          143 c          157 g          220 t
ORIGIN      
        1 caggaaaaga gcacggcaat tttccctttg catggtagaa cttagaggtg aagcacaatc
       61 gtttcagtct ggatcagact atcctttaga agtgtaatta aaaaatcgac ggacaaggtt
      121 cattcctctc cgctgctgcc tttgtatgta cgctgggcat gcagcaccta agtcagatgc
      181 tgctttgtta taattagggc agcaaatttt gttttctgtt tggtacttgc tgttacatat
      241 tgcatgtaat gtatggcact gttaagggaa aaaaattgga gtcaaagtgc ctggaaagtt
      301 aggtctgctc tgtagcactg tgagattgtt gacatctgcc gaggttggag agctcagtaa
      361 gcaggaaatg gggtgtcact ctgagtggta gtttaccatt atcctggcat cctaatgaag
      421 tgtctgcagt gcacagagct tctggatggc atcttaacgc acggctaagc aaaagcactt
      481 ctctccttgt cactgtcatc catctgcctg caccctactg tagccaatgg gatggaacca
      541 tgctacaatg tgctataagc catttagagt tgcacattgc ataatcagtc ccatcaaata
      601 tgtaaaaaat gactattatt ggttatttcc ctcaaactct ggcacctgga gtttgataca
      661 ttaaagttta acttttctcc cattaattcc acatatattt ttgttaaatg gg
//
LOCUS       KCPA01002111             674 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 232304tic ultra-conserved element locus
            uce-7224, sequence.
ACCESSION   KCPA01002111
VERSION     KCPA01002111.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 674)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 674)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="232304tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>674
                     /note="ultra-conserved element locus uce-7224"
BASE COUNT          224 a          130 c          116 g          204 t
ORIGIN      
        1 gacagaacaa gtagaattgt taagtgtttc caaggttctg ttgtcagtgt tacaccaagg
       61 cattttagag ctgtctacca agtgcaccaa caacacactt gggacacacg cagaagtcta
      121 ttcactaggt cagggacctg aaaatatttg aaatagttct ttagaaaaat aaaataaccc
      181 acactctttt tgaattactg tggtctttca aagtccatat aaagtattac acaaggagac
      241 aaagctattt taccaggcag gcagatattc caaattactg gttcttaaca agcatggtaa
      301 tacatcagtc aaaagcaata aatttaaact taatgaaatc tcaatttgcc tacagtgcat
      361 ttcactttga cattttctac attgccacgg tgctttgata aagtttttta aaatgcaaag
      421 aaagtgtctg taaggctaaa gagcagactt ggtgccattg tgcccagtgg aacattacag
      481 tacttaagtt ccatcactat atgccctgtg gcagactaag cctgagtgct aacacaggtt
      541 cagttttcat tatcatcatg tgattatcca ttttactgca tttaactgat aatacaacta
      601 ccagctcacc ttaaaagaat tagcttggag gtttcattgc tttccaaatg gaattcattt
      661 gacaaacaaa tgac
//
LOCUS       KCPA01002112             589 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 232417tic ultra-conserved element locus
            uce-2772, sequence.
ACCESSION   KCPA01002112
VERSION     KCPA01002112.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 589)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 589)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="232417tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>589
                     /note="ultra-conserved element locus uce-2772"
BASE COUNT          159 a          156 c          121 g          153 t
ORIGIN      
        1 aaggagtgaa agacagaact cataaaaaac ctgtaaaaat ccaaatgctc cagctattac
       61 agatttctaa aaataaagca gagtaggttt cagtagcaat aataagctgc atcttatcct
      121 tattttagat ttataagaaa aatatggctg ccttttagta ctcatggctc agagcaaacc
      181 atggtgcttc accccacaaa taaaagtgag ctttcagctt gctgttgtgt tgcgtttcat
      241 ttgtccttta agtgtgtcag ctgcttctgc accccctttc acaatgcata ggctgtcgtt
      301 ccatgaccta gcattattaa attgcactta tcaatcattc ttgccaggaa tgccatcgcc
      361 aactacatta aagaagtcag agaagtctgg tttcagcagt ccctcgcctt cgcagacctc
      421 ctcccttgga acggctttca cacagcacca tcgacctgtc attacaggac ccagaggtga
      481 ggcctttccc gagagccccc aggcaggccg cgccagcgcc gctccacgga aagccatcgc
      541 cgcctgcgac agcgaggggc tgtgctcgga accttcactg gttctgtta
//
LOCUS       KCPA01002113             895 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 232528tic ultra-conserved element locus
            uce-662, sequence.
ACCESSION   KCPA01002113
VERSION     KCPA01002113.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 895)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 895)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..895
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="232528tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>895
                     /note="ultra-conserved element locus uce-662"
BASE COUNT          275 a          153 c          165 g          302 t
ORIGIN      
        1 tgcatggtat ttgctcagtt attgctatct gaattacact cacatgcatg attataattt
       61 actataatgt ttacaaccag ggttttcatg tggttttaat ttacactgca attaaacgag
      121 gagagtatca gacatcaggg gttaagaggt accttatcta caaatcatga aaattggtta
      181 gcatttgaaa acatcaaaaa gagcctgttt atttaaataa atatttttta tacttgctca
      241 tctttcattg tacagctata ctgttttgta gaaagttttt accccaagta aatttctcat
      301 ttgttttttt agtgtttgtg ttcaataatg catcgattcc cagcagcagg gaagagtgag
      361 agatttatgg tgtatgattg tgtcatgtct tgttttatca tgtcgataga tagaaaattg
      421 accacaacta caaaagccta tttataattc tatttgatca ccatgggaac tcatcaaaac
      481 agagggcagc accgaagttt cattaacaga tcatctcaga tctcctgctg tgtcctgtct
      541 tcattttctt ttcacatcat ccttttgctt agagccccag catcagagag gaggtcagag
      601 caacagtaat ggcacattta ccattcccca ccatccccca gattaatatt aaactgttaa
      661 aagaaaatga gagtttattg attgttttaa gccaggcatg ttctagcagc aagccgttat
      721 tcagattcag tgagtggcaa tagataactg atttcaataa gaagacagag aagaatgcgg
      781 tccagggatc agaacagagg gagaacaatg gcagaggaat gtttaatctt ttttatggca
      841 ctaatcgtta cttttgcaat ttgtgattgt ttatagatca tttcttttaa gtcca
//
LOCUS       KCPA01002114             584 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 232639tic ultra-conserved element locus
            uce-4662, sequence.
ACCESSION   KCPA01002114
VERSION     KCPA01002114.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 584)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 584)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..584
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="232639tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>584
                     /note="ultra-conserved element locus uce-4662"
BASE COUNT          169 a          150 c          110 g          155 t
ORIGIN      
        1 attaattaaa actggattct ttgctggtgg cctattgcag ggctgtggtc tgttcctgct
       61 cgttctgctc ctttggggga tttcaggcag gttatttttg tgatttcaca tctgccacaa
      121 gtattcctct aagagacaga aagggaaagg ctcggttaag aaaaacacag ccacctccaa
      181 agtgctaaaa ctgcaataaa cccatcatct ctaacaacag cggcatgaaa agataaaacc
      241 caggctgcca agaatgtagt aaccacccat tcacttttaa atgctctcca cacttcaatg
      301 cacagaccta attacttttc tgcattccca aatccacttt gcagggctgc aatcagaaac
      361 ctggtgttaa aatattttag actctaagga tcaagactaa ttatgggcct aagctgcacc
      421 tcttggtttc cttacgaagc cgtctgcccc ctcccccatc cactccaccc ccttcccttc
      481 ttttgggatg tttaaaagca tgctccctag aagaaaggct gtccagtctc agccgggggt
      541 gaagtaaaga gagaataaaa caaaaagcta ctcagtccaa ttca
//
LOCUS       KCPA01002115             660 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 232751tic ultra-conserved element locus
            uce-411, sequence.
ACCESSION   KCPA01002115
VERSION     KCPA01002115.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 660)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 660)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="232751tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>660
                     /note="ultra-conserved element locus uce-411"
BASE COUNT          207 a          114 c          119 g          220 t
ORIGIN      
        1 tacatcttta atattaaaca caacagatga tataatcaca gaaataatac cagtaacttt
       61 caaggtgtaa aactgtagtc aattttcttc atgtttatca agccgtgcat tttaaggctt
      121 tccgttggat tagcaagagt ggaaagcaga gtcctctgaa cattccccag atctgctttt
      181 taagaatcaa catggtacat accatgtgaa ctgtcacatt aataacccta tgctgatatt
      241 caaattttct gtcttaagct aaagaaagat tgaataccct gctgttgtgt ggccaagatt
      301 gaagaggtgt ctcactgaca ttgttcaaag tttatgaaaa tatatgaatg ctcaaatgtc
      361 attggctttg cgcctccaac agactgtggt tttatgagaa atcagtcttt taatcaaaat
      421 gattgaatac cttaaggtcg aatccaaaga tatccgttaa tatctagaaa cgtgctattt
      481 ctgcgtattt tgccaaattt gtggggcatt ttaaagtgtt aatttgtgca tcccatattg
      541 aaaattgatc ttgagtttta gctttttgtc aagcaaaaac atatggttac aagctctatg
      601 cattttatgt gacggctgtt gaagctgtca catgtgcaaa cttgataacc gatgtgacac
//
LOCUS       KCPA01002116             624 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 232863tic ultra-conserved element locus
            uce-5022, sequence.
ACCESSION   KCPA01002116
VERSION     KCPA01002116.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 624)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 624)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="232863tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>624
                     /note="ultra-conserved element locus uce-5022"
BASE COUNT          193 a          122 c          113 g          196 t
ORIGIN      
        1 aaaaacagta ttttcagaat tccactctgc tgctttcaga ctatttccat caaccctctt
       61 attcattttg atttatttcc atccataagc agactaacgc ttttctatgc ttttattgtt
      121 cttcaagaat aggccttcta ttggagaaaa ataatgtctc tacgaccacc actttgctca
      181 atgcagatct tcattaatct gcagccacag tacaggcttt tagcagcaag cacttttgat
      241 gggaattgaa tttgatactg cattatggtt gtagggcttc tcacaataga ctgtgttctt
      301 ttctgtgtct gtgcacaatc agagagaccc aattaaataa tttggtgcaa taatggagaa
      361 caaaagagta tgagggctta aagtgagggc ttcagcattt gtattctccc ttttctgtat
      421 catgttaatt aatttgcctg aaaaccaaaa gaaagaacat aatgtgaaaa gcatagctca
      481 tctacaacat ggaggcactt taaatgcaga taccagacca aatcaacatg taacaaagga
      541 acattcattg catttccata agaaaagttg ccagctaatg ttgagtggtc ctagtcatgg
      601 ccagtggacc tgagggtagc tatt
//
LOCUS       KCPA01002117             431 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 232964tic ultra-conserved element locus
            uce-365, sequence.
ACCESSION   KCPA01002117
VERSION     KCPA01002117.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 431)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 431)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="232964tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>431
                     /note="ultra-conserved element locus uce-365"
BASE COUNT          134 a           81 c           89 g          127 t
ORIGIN      
        1 agtgaaaagc ttttgctttc ttttctattg cttcgcagac ctaagaccct gctcaaattt
       61 ctgcatagtt aatttgtcag tttataaatt accacattac gttaacactg aatggttcaa
      121 aacacaaata caagcacaga gggcttgaat atttgaagtg ttttagtact atagggaaat
      181 aattttgttg tcaagctgtg gcagatatag aagtgctgag ggatacatga ccatttcatc
      241 aggacggtgt cgatgatggc ctatgaacat ccaaggggag aaattgtctt ttatcactat
      301 tgtgtaccac gcaggtccag atggaggata aaacatgcat gagttgcccg cagctctgaa
      361 aataattata ctcatttgcc agaaatgtag agagtgcatc caaccaagtt accacccgtc
      421 atagtgacac t
//
LOCUS       KCPA01002118             401 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 233066tic ultra-conserved element locus
            uce-7752, sequence.
ACCESSION   KCPA01002118
VERSION     KCPA01002118.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 401)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 401)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="233066tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>401
                     /note="ultra-conserved element locus uce-7752"
BASE COUNT          126 a           54 c           72 g          149 t
ORIGIN      
        1 gtaataacat tagttgagat aatcctggtg ttctgcttgt cttttgtgtt agatatgagc
       61 tcctgagacg taaaatccag caaccacttg catcaaatcc ccctgaagat ttaaatctgt
      121 ggcacaatat ttactcagga actcagtggt tttatgaaga taagggtctt agcaggtgag
      181 attacaaaaa ctataaaaac aaatgctggc attttgtata gtgtatgttt aatagttcaa
      241 agtatttctt gtgtctttat gtagtgaaca tattaattat gtaatgaaat attttttgtc
      301 atcatctttg gtgttaatca ttctaatatg cggggattta ttattagtgt gtcattcttg
      361 actcatacat tgttttgctt tgaaaaacaa atgaaaataa a
//
LOCUS       KCPA01002119             759 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 233179tic ultra-conserved element locus
            uce-1539, sequence.
ACCESSION   KCPA01002119
VERSION     KCPA01002119.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 759)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 759)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..759
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="233179tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>759
                     /note="ultra-conserved element locus uce-1539"
BASE COUNT          214 a          147 c          152 g          246 t
ORIGIN      
        1 gacatgctcg tcatgaaaaa gaaccatttc tgaagcccgg ttggggccaa acatttacca
       61 cctttgcttc atagtaacca gtcgagatga agcacgtctt tagaactttg ttggacaccg
      121 tgttgaaatt acccccccat cggttgtgaa gaactgtgct acattcaggc taaccattga
      181 actcagtttt tccctcctgc ctttttgtct ggcaggctac tgttcttgtt gctcttctgt
      241 gtaatgaagt ttaaatgctt gtttggaaca ctttatttaa cagtttagaa ggcttgatag
      301 aaagagtgct ttagtctgaa gagtatacat tggataggaa agtatttcct tctcttgttt
      361 ctcaagtctc tctccgcctt acttagcttg agatctttgc agcttggttc atggattcta
      421 gccttgcccg ttgcgcagta tatcaattga gaggataaac caatgaacta aaaagcactc
      481 tcagtatcac atttgacaaa aagttttgta cttttcacat agctcgttgc cctgcaaagg
      541 ggttaacagc acaatttttt aaaaataaat tatttatagg attaaaatga cttcatttgt
      601 atacatttgg aattaaaacc atgcaagaag tgttgtgaaa cacggtatca ctgatgcttt
      661 tctggagtgt cctgagactc aatcaaaagc agtggctgga aggagatcta tgtagacagt
      721 tttcagatgg aggaattcac tgtccatctt aacagataa
//
LOCUS       KCPA01002120             414 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 233280tic ultra-conserved element locus
            uce-2970, sequence.
ACCESSION   KCPA01002120
VERSION     KCPA01002120.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 414)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 414)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="233280tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>414
                     /note="ultra-conserved element locus uce-2970"
BASE COUNT          122 a           86 c           91 g          115 t
ORIGIN      
        1 tagttcacat ggactgcctt tagttctgtg agagaaactt aaagaatatc cttctggctt
       61 tacaagtaaa atttttgaaa agttcaagat tttatgtaga tttttagagc aagggatctg
      121 caggtatggt gcccagtgta cttcagcaca ttcccaggaa gagctgacag aatggcagaa
      181 acgatacgct tcccgcttga tccgattgaa acagcagaag gaaaacaaac agtgctcggg
      241 cagttacatg gaaaccctga ttgagaaatg gatgaattcg ttatctcctg agaaagtggt
      301 aaggaacaca tttaaaacag cctggtcttg gccctgatta aagccggtcg aatcactcct
      361 caccaagaaa ttgtcctttg cttccctttc tgtcatgccc taggtcttct tgca
//
LOCUS       KCPA01002121             275 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 233387tic ultra-conserved element locus
            uce-886, sequence.
ACCESSION   KCPA01002121
VERSION     KCPA01002121.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 275)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 275)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="233387tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>275
                     /note="ultra-conserved element locus uce-886"
BASE COUNT           84 a           45 c           54 g           92 t
ORIGIN      
        1 aaaaataatt aaaagcgtct cagtttttaa gggagaacta cataatgtat taattggttg
       61 ctattagcat gcagttttat tgagcatagc acacagaagt ctgattgtaa gcgaggagtg
      121 ttttcaatga aagtggagtt attttagctg cagacatgtt tacatttctg tggtttagtc
      181 tataactttc tctttttctt gcttcagaat tctgctccat gaagcaaagc ccttagctcc
      241 cagacattcc aaaaagtctg ccaaaataat agggg
//
LOCUS       KCPA01002122             689 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 233496tic ultra-conserved element locus
            uce-5808, sequence.
ACCESSION   KCPA01002122
VERSION     KCPA01002122.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 689)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 689)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..689
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="233496tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>689
                     /note="ultra-conserved element locus uce-5808"
BASE COUNT          218 a          142 c          150 g          179 t
ORIGIN      
        1 agtgtcaagg ttctagctga ggatggaaat ccagatcctc gctccatata gatcaatggt
       61 accagatgcc ctattctaca gttgttgaga gcctatacaa aaagtatcag aaggcctcag
      121 ggccagattc tgaggtcaca ttcataccag gtgaagagct gatctggaaa gtgtgctaca
      181 gaaaattcta ccctcttgtc tcacattaaa accccctgaa gtgccactct ggttgtgtga
      241 gtttattgat ttcccccagc ccagagaaac agaaaaaggg gatggggtgc aggcaaaggg
      301 atggaaatag aaagctataa attatttgtg acaggaaagc aatagtgcca gagtgctgag
      361 cacaagtccc gtgtcactat tagattcctt ttagcctgat gacactgtaa aagaggttaa
      421 gtgtctgatg gaatcgtaca ccttgggggc aggggcagtc caggagcaga acaagccaca
      481 gagagcgggt atatcaattc tccacgccaa taatattccc ctcattgatc gcaacacaaa
      541 gttcaaaaat ctcattatag ctaggcagtc ctggaacttt tttaaaatca atagagtgat
      601 ataatatatg tatactttgt ataaatgttt ctatccatcc atctaccaaa atctgcctga
      661 gggtatataa gttaacctac acattatac
//
LOCUS       KCPA01002123             614 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 233607tic ultra-conserved element locus
            uce-2361, sequence.
ACCESSION   KCPA01002123
VERSION     KCPA01002123.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 614)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 614)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..614
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="233607tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>614
                     /note="ultra-conserved element locus uce-2361"
BASE COUNT          166 a          144 c          168 g          136 t
ORIGIN      
        1 agcggagcat tgattaatta ttcccaagtc gctccgaatc gctttcattt gaagagcggg
       61 aaggagaaag gctgtccccg acaaaggagg ccgatctgac acccactgaa gtctatcttg
      121 tcagcgcaag gccaacaaca attagcagcc taatcccctc tgagctggga agccattact
      181 caccacgcga tagcgttaac aatcaatacc atcacaatga gcccagcaat taatgaagct
      241 aaagtcttac ttcagaacct taattctcgc tgtgtggctt taaacgggag ggtttgtgat
      301 cgttataatt aactggtggt attcagccag gagttagtca atgaaactaa tctggattgg
      361 agatgacaag aggcacagtg tgatggtgtc acctttgttt tctgacctcc cgcttggcga
      421 tagcagatta gcagcccggg ctgacaggca aatgtaatta acagctgaga ccctggtgga
      481 ataaaacccg ccctgcggac agccccgggc aggacaagag gcagcagggc aggcggtggc
      541 ggggctttgc tgggggtcag tcaggatgaa gctgtggagc atgtgccagc acacctgtga
      601 gtccataaag ctgg
//
LOCUS       KCPA01002124             452 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 233716tic ultra-conserved element locus
            uce-5663, sequence.
ACCESSION   KCPA01002124
VERSION     KCPA01002124.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 452)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 452)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="233716tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>452
                     /note="ultra-conserved element locus uce-5663"
BASE COUNT          123 a           71 c           73 g          185 t
ORIGIN      
        1 acatgtttat tctttgctaa aacatgtttc tgcaagtgcc acacctatat tttgcatgtt
       61 ttcagtcagt ttgctcaaaa gattatagga aaaataaatc tctcaaaatc ctcagaatct
      121 cagagcaaaa taccagcctg ttttgacata gctaaacact tctaattctt agaattttta
      181 ttaactgtga aacatgggta gggcactgaa acatgcattt ttatattttt gctccttatg
      241 aaccagataa cacatgagat gcaatgaaat tctcctagat gtcaattttt aattctctta
      301 tcttgaaaca tggacgtaaa tggttgctag atttttttgg tagtgattgc atcttatgtg
      361 ggatgtatct ggtcttttat tatttgtttt atagtgtcat ttcaatgtaa tgtgctgttc
      421 tttgtgtctt tgttgtctct tttttttctt tg
//
LOCUS       KCPA01002125             612 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 233826tic ultra-conserved element locus
            uce-3799, sequence.
ACCESSION   KCPA01002125
VERSION     KCPA01002125.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 612)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 612)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="233826tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>612
                     /note="ultra-conserved element locus uce-3799"
BASE COUNT          178 a          113 c          136 g          185 t
ORIGIN      
        1 attatattca tgcagcaatg gattattgta gcggtttgga acatgatatt gttcctatgg
       61 ctacctaggt gcccaataaa gacagaggga ttcaggaacc ccctagtggc taaaataaag
      121 taattgtcga cagagtacgg taccgactaa gatcagaaga tgagatgcag acaattaaag
      181 tattgcagtt ttagcagagc aagtcctgct taggaaggct tctaacaatt accaacaatt
      241 ctttagaaaa gagccacagt ttacatgtgc agtcagttgc tttctaattg ctacagcagg
      301 ctaccactgg gaagaacaaa ggaaatattt agcacatcgt aaattcttct gcagccctgc
      361 cgagtggctg gagttcagat tacaagttta taaccaacat ttgagagcaa tttctcctcc
      421 actttgagaa agtgggtggg gaagctgttc tacactttct tcaaacgcct gaagtaatgt
      481 gtgtctgaaa gaaatgtctt ccacttgtct tttgattcag gcttgtacgg ttatatattc
      541 agatgaatgc gccattgctg ttgctgttgc tataactatt attgctattg tgggtgattt
      601 tctggaatcc tg
//
LOCUS       KCPA01002126             569 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 233940tic ultra-conserved element locus
            uce-2858, sequence.
ACCESSION   KCPA01002126
VERSION     KCPA01002126.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 569)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 569)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="233940tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>569
                     /note="ultra-conserved element locus uce-2858"
BASE COUNT          164 a          126 c          118 g          161 t
ORIGIN      
        1 ttgctcctat cttctgcaca gagcctacct taagaaagtt cctcttgcta tctttagtct
       61 tctccctgga gtatctggca catcaggaca agagggatct cagccccaca gcttcatttg
      121 ggcctgttaa ctgtaactac tgatgtcgtt tacaaggata aacccttaaa gccaggccaa
      181 ggtagacaaa gaaagaacac tggagtaatt ccctttggac agctgagatt ggtgttcaag
      241 ttattgaaaa tctgtgtaac tcattttctc ttttgtcata cttaaaaaat ccatgaagtt
      301 tggctgagtg caaacaataa gcttttatag ttgctgccct tgttcataaa tgtgtaatct
      361 tctgggacca tcagaaaagc tttggtacag caaattaaaa ctctctaaac tttcctgtgt
      421 ctccttggac gttttgtaga cctgcaaata ccaagcagta atcaatataa taaggaaaac
      481 tggcagctcc cgagtcagag agcacagcac agctttctca tggctagaca tggctcctgc
      541 cagggtcaca gaggaggatg gcacaggga
//
LOCUS       KCPA01002127             629 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 234049tic ultra-conserved element locus
            uce-350, sequence.
ACCESSION   KCPA01002127
VERSION     KCPA01002127.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 629)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 629)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..629
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="234049tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>629
                     /note="ultra-conserved element locus uce-350"
BASE COUNT          201 a          117 c          113 g          198 t
ORIGIN      
        1 aagtaggtgt tgtatagcag attacgggga tgcagaggac atctgtccca ctcagagaac
       61 aggccttgga acagatgtct caaatttctt caaatccaga acatgctgtc catttttctg
      121 ttttttcctc tctgagtacc taagtattat ctttaatgca taaaatatgt aaattcttaa
      181 agcatcattt tgctctttag tgagtttaga tattacaaaa cggtttaatt ataaaaacag
      241 acagacctag tcctgggacc tgtgcagcta gaaataaatg tgcaatcaaa actgcaatta
      301 cctgcagaat ttagtgtaaa cagatcagca atcacataac aaacacaggc tagtttgcat
      361 tctgatatga atacagttag atccaaagca attttccttt atttatctta gctgctcagc
      421 ataaataaag caagggcatt gaagcaatta gcataattag agtatcgtgg tcaggccctg
      481 tgtgatttct agagacgttt cacttaagaa ttctttttcc cgtacaagag tttccctgag
      541 ccactaaaat atcgctttgg gcatttttgt atttcaaatt tgcaagttgt caatttgaaa
      601 aacccttgac acacggatgt gaaagcatc
//
LOCUS       KCPA01002128             625 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 234160tic ultra-conserved element locus
            uce-3981, sequence.
ACCESSION   KCPA01002128
VERSION     KCPA01002128.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 625)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 625)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..625
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="234160tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>625
                     /note="ultra-conserved element locus uce-3981"
BASE COUNT          174 a          132 c          132 g          187 t
ORIGIN      
        1 atggaagggt attcaaacct acatttgtgc gataacctct aattctaagc acagtgatga
       61 actgtaagta aattttacca tagagccatg ttttccttag cctctccatc tgctcaattt
      121 tgacacccct gtcattaact gtcattttcc tttaaatata cagtgaagct gaaaggccag
      181 ctctacatca catcatttca gattaggggc agttcctttg agctgagcac tgtttaggtg
      241 tcagaaagaa gtctctgacc tctctcgtac cacactgccg cagggcctta attagtactg
      301 actccagcca ttactgcagg gaggacaaag gcgaccacat catttttcta cttaggaagt
      361 tagcgtctga cctaataact tgtccaggct tgcaggacag tgtaacggcc gcacaatggc
      421 agtggggatt atttgtcaga ttctttgctc ctctgaatgt aggaaaatca gggaagttgg
      481 ctgttacatc cttcagtctt gcatgttgat ttgtcatgga gaagatgaca gacagcaaag
      541 gagtcagata ttcagaagag tgtgataacg aagtcttaga agtatctgat tatttaagat
      601 atcactcatc tttcaagatc tgttc
//
LOCUS       KCPA01002129             656 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 234270tic ultra-conserved element locus
            uce-1092, sequence.
ACCESSION   KCPA01002129
VERSION     KCPA01002129.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 656)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 656)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..656
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="234270tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>656
                     /note="ultra-conserved element locus uce-1092"
BASE COUNT          197 a          141 c          107 g          211 t
ORIGIN      
        1 tttctttcag ttcattttgt caaacaaatg agctgaagat caatactact gaaatactgt
       61 aataaattta aaactccagc cataaaactt aggctacctc ggagtattct agagaatagt
      121 aaacatggag acctgggtga ttttaactct ctgtgccttc ctttctacct gagtcctttc
      181 cactttctct ccataatgcc atgttggagt acatcctgct tagcctccaa tcaacatttc
      241 aagcactggg atcatgtttg atattgtcag atggcctgga aaattaaaaa cccaattaaa
      301 ggctcagcac gcgggtcagc tcttctgcat atcaaaaggc ctcctctggc tattctgctc
      361 aaattgtatc tgttaacagc tcactttgca gagagtgaaa tagcgcagcg tttatgagta
      421 ataagtacct tccagctgat acatttcaaa cacaaaccac tttcatggcc ctggcaaaaa
      481 gtacaagtca taatcaaatt gtcaattttt tcctgcgaga tgcatagatc cattgtaact
      541 gtgattgtta aagaaggaaa tgcattttat tcacacgttg ggaaaaaaag atgcacattt
      601 tccctacaat taaagatttt ttgtcacttt tttacattgc ctttccttta catttc
//
LOCUS       KCPA01002130             793 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 234383tic ultra-conserved element locus
            uce-6410, sequence.
ACCESSION   KCPA01002130
VERSION     KCPA01002130.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 793)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 793)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..793
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="234383tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>793
                     /note="ultra-conserved element locus uce-6410"
BASE COUNT          252 a          170 c          141 g          230 t
ORIGIN      
        1 aatgaatgtt acacactgaa agtgccataa ctgattaaac tacaatttcc cactaccaga
       61 tagagagaga cttgggaact ccagcagtgg acaactctga tgctctgcca acaggccttc
      121 ggggcacagt gtggtattta gaaaaacaca ctgtaaattc catatgaata tattctaaaa
      181 gactatgtgt atacaacagg ttttaaagaa cattagatga aacagcttag gttcgcagcc
      241 gatgagccat gcaaaatgga tgtgttttaa caattttaga atcattacaa ggctgcactg
      301 gagaatattt ctgttgggtt cctctgcccc tctccccacc tccccaaaca ttgcttgtgc
      361 tttgctttca cataaaatct ttcttttgtc agtctctttg ttggtgcaaa attggcagtg
      421 gttcaaattc aaagtactgc tattcattta ctgaccatta aaccaatgtc attctagttc
      481 acatcagcca gagagctaag ctctaaaaaa cataaaaggc ctgcttcacc actgacgaat
      541 aatgtgtaca tttttacaga gcttaaacct taatgctttg cctgaaacta acaatacagt
      601 ataccttatc attccttttt cacaagcagg cagctgctga aacgcttgcc acttcaaaat
      661 atcaattgct tgccagagtt gtcctcaaca caccctgtca aactcatgta tattgtgcaa
      721 tgaaaatggt gcaggactga aagctagaaa ttatgtcaaa ttctgctgta agggtatgat
      781 gtgcaaagaa caa
//
LOCUS       KCPA01002131             326 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 234482tic ultra-conserved element locus
            uce-6016, sequence.
ACCESSION   KCPA01002131
VERSION     KCPA01002131.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 326)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 326)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="234482tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>326
                     /note="ultra-conserved element locus uce-6016"
BASE COUNT          119 a           62 c           73 g           72 t
ORIGIN      
        1 tgtcttcttc taagaggaga ggggagaaac aggaaagaag taagaaaaaa agcctcagat
       61 gaaccctagt aagtacaagc tggtaatccc taaagcctca gagtagagtg caaagccctg
      121 gaagaaagaa attaataact ttcaaagtat gaccttgaaa atggaattaa cagtattcct
      181 cccttttaag ccttcatgat aataaagatt tcatcttctg aagccctggc aagagagtca
      241 acagactagg aaaaattgct tcctgcagag cagctggcaa gtgtaaaccc agccccaggg
      301 agtgagatga tttgcatgaa gcacat
//
LOCUS       KCPA01002132             634 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 234585tic ultra-conserved element locus
            uce-5294, sequence.
ACCESSION   KCPA01002132
VERSION     KCPA01002132.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 634)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 634)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="234585tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>634
                     /note="ultra-conserved element locus uce-5294"
BASE COUNT          168 a          134 c          153 g          179 t
ORIGIN      
        1 tcatggccag tggtatttat tggatcatgt taaaggtgtg ggaattgctc tgcaggctct
       61 ttagctgcct aaattaagtg tttagaaaga aagcgaaagg gagagaagtt gaagaggtgc
      121 agaagctttc ttcctggcag ctgggcaccc tgcagctgac taaccccact gctcgaccgt
      181 ggtcacagtt gctttggaga atcacgtctc agctcttttc tctgcaccac gccccccctc
      241 caaaagcaag gaaatggatg tgcattgatg taatttagta ccttggagac gcggacaaat
      301 tagtgtagaa cattatcact agttaattat gaatgaccga ttaatcaacc taatctaata
      361 ttccacatta tgttgatgtt attaaagtgc atcatgaaaa tgacagatcg tcttcatttg
      421 cgttctttgg ccaaatgtgc actctgcagt catgatgtca aatagtttgc cagtttgaat
      481 atccaagtta agtaattccc cggcatgttt acctgcaccc tggcctctgt gaggttgatt
      541 ttcagagcca gctcttcccg agtgaacaca tctgggtagt gggtttgagc aaaaacggct
      601 tccagggcct cgagctgatg gagggaagga gagc
//
LOCUS       KCPA01002133             262 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 234692tic ultra-conserved element locus
            uce-7466, sequence.
ACCESSION   KCPA01002133
VERSION     KCPA01002133.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 262)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 262)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="234692tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>262
                     /note="ultra-conserved element locus uce-7466"
BASE COUNT           54 a           95 c           63 g           50 t
ORIGIN      
        1 catttaacac ccattcttct gcctcttgtc cccgcgtagg caccgagagc gggcgcagct
       61 ccccctacta tagccagtta gatgtgaggt cctccactcc aacctcatac caagcgccca
      121 agcatttcca catcccaggt aggctccgga gcgcccgcat gagccgtccc cgctgtgtcg
      181 catgcgtagc tccgccgcct ggagccagct ggcagcagga tctagtagag gccatccata
      241 aacaggacct acggcttgaa cc
//
LOCUS       KCPA01002134             441 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 234793tic ultra-conserved element locus
            uce-887, sequence.
ACCESSION   KCPA01002134
VERSION     KCPA01002134.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 441)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 441)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="234793tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>441
                     /note="ultra-conserved element locus uce-887"
BASE COUNT          132 a           81 c           91 g          137 t
ORIGIN      
        1 ggacagaaat tcataacaag gggccgaaga gctgggcaga acaacttgtc aaaaagaagg
       61 aaattccact acagattagc ttatttttaa gcatgtcaag ctctacatac aaacatgata
      121 tattgcttcc ttgtaatgtc tgtttaggcc cagatgctcg aggcagtgtc agggagtgct
      181 gtaaattttg tctgagtcag ggcaattctg attgatctct gagtgtaaaa tcgataagaa
      241 gacactgtca ttttcttaaa ggatgagcta gaaaaggaaa ataaattaag actccactga
      301 atgtctatct ccagtgctca ttaattcagt gtggtctgta ctttgttaat gttatgtcca
      361 cagctttaat cttccaggtg ctcttcctgc agatagtcga cagcagccct ttattatgtt
      421 atgtatattt catctacacg t
//
LOCUS       KCPA01002135             712 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 234905tic ultra-conserved element locus
            uce-2088, sequence.
ACCESSION   KCPA01002135
VERSION     KCPA01002135.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 712)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 712)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..712
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="234905tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>712
                     /note="ultra-conserved element locus uce-2088"
BASE COUNT          216 a          143 c          154 g          199 t
ORIGIN      
        1 agaggacttg gcagcactgg gacatgagcg agaactttga ggtagatcca gccttttttg
       61 ggaactgcca actccaaggc ccagcagaca cctaaggcac cagggaagct gaaggaattc
      121 ttttaaagtc tgtccctgta gttgtaaagt ctgtcactgc agttcacgag agacaactaa
      181 tcaataaccg tggaaccaaa tagtcaaata aaaataaaat ccattaagat ggcagaggta
      241 tttacttgct gtatttacac catggagagc tgcactgtca gtcagtgctt ccccttcaca
      301 agatagaagc aatttgtgca gactgatccc agttttctca ttaatatgta aatgaggcac
      361 gccagttgtt aggttagaag aaagctgtca tgtttattgt gacagattta atggatgtgt
      421 ttggattgtg cattcaatgt gttttcaaga gcatgtctta tctttgttta ggcagtaaat
      481 caaacatgta aacaacaatt cattagcatc tgtcagaagc tcaaagctac attgttatag
      541 ttgaaaatct ccccagaggt gaaaaaaagt atatctgact tattccagat tagctggaat
      601 attttctttc tgtttgccaa cttgtaagta atgattgagc cgccgcatag gtgcactcag
      661 gtagcactag gggtcagaca gaaaccactg gccagccacc tctgccacca ct
//
LOCUS       KCPA01002136             658 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 235013tic ultra-conserved element locus
            uce-3114, sequence.
ACCESSION   KCPA01002136
VERSION     KCPA01002136.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 658)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 658)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..658
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="235013tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>658
                     /note="ultra-conserved element locus uce-3114"
BASE COUNT          168 a          134 c          157 g          199 t
ORIGIN      
        1 ttaccatgcc gtggagccag ccatctgtca gcaaaacagg aaggcacggg ttccttctcc
       61 ctccagggct tgtttcgcta ttttcgggag ctgtacttct cccctgtgca gcaccaggct
      121 ggtgcgatct gagggaaggg ctcccgggtg agcaaggggc caaagcctgg agctgctgct
      181 ctgcccatct gctgtggctg gaggtgtatt cattattaat ggaggtagtg gctgttgctg
      241 ctcagatatg cagccctgcc tgggtaaatg agacattctt cagcaaattg cttcgttttt
      301 tgattgctga ttgtacgtgt gtcaccaagc tgactcaagg ttcatcgatg catgctcagt
      361 aaattagaaa gaacataact atggatcaac caagagaatg aattctgtgc ctacaatgac
      421 ccagggccat ttaattttct gcttaatttt gttgcagtca gtttgcattt tgggttatta
      481 tgcagtagga aattaacaat aaataacaaa tttggtcctc ctgtgcttgt aatgatattt
      541 ttataaatct ttgtaatgct gtttttcaaa ggatcaaggt ctgtgccagt ctgatactcc
      601 agaaagtatg cagggaggaa ataaagagaa aaatacatta ttcttcccag ataatctt
//
LOCUS       KCPA01002137             605 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 235124tic ultra-conserved element locus
            uce-7108, sequence.
ACCESSION   KCPA01002137
VERSION     KCPA01002137.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 605)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 605)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..605
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="235124tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>605
                     /note="ultra-conserved element locus uce-7108"
BASE COUNT          178 a          116 c           97 g          214 t
ORIGIN      
        1 tttttttatt gtcacatcca tggcattttt aaagtaaata tgagtacaag gtttatatta
       61 ttttaaatgt atattgtatt tgtcttccca acactgtggt ttttagtact gtgaataacg
      121 tagtatggag ccagcctatt aaacagcctg tttttgtaag gaaactgtta gtccacctac
      181 aatattctat tgcttactgt gttcttccaa tatgcttagc attccacgac ctaaatgatc
      241 atttgttgaa caaattcatg cttttattag tcaaaataca gagaaaacag agcccccctg
      301 tttcaagata tttgctaatg cacggttaat tatcacatat agcttactat aattcatttt
      361 acagggagac ctcctgcagg taacatacta gcagtttatg aagcaaaata acctcactat
      421 agattagaac tgtttcacta ctggtcagac agttgctgct tctaggcctt ctcacttcac
      481 attgctaatt tgaacaaggc tttattttta tatttgtcag cagcaagact gtagcatggt
      541 tgttaaacct ctcccaggcc taattagagt agcaatgcta gcattcataa tgaatctcgt
      601 gtcct
//
LOCUS       KCPA01002138             488 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 235233tic ultra-conserved element locus
            uce-3051, sequence.
ACCESSION   KCPA01002138
VERSION     KCPA01002138.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 488)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 488)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..488
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="235233tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>488
                     /note="ultra-conserved element locus uce-3051"
BASE COUNT          157 a          105 c           87 g          139 t
ORIGIN      
        1 aagtccacgt gacactgacc agacataaag gaactctttc tgtccctatc tgattagatt
       61 gggtcttaaa gatgaaagct ccatttcatg actttatcca cctatccaca gtatgttccc
      121 gagctagtta aaattaaact tagctatcaa aatgctaaac ttgatagctc atttatcttt
      181 ctgtctccca actctacatt acaatacagc agtgattgat cttgcgtctt caaggtacta
      241 tatagtataa aaactaagag aagattaatt aaaagccgtc gcatccagac aggtttttaa
      301 ataagtttta gatttagaca atatatcagc tgaagcaaaa agattctgag accataagcc
      361 tgtaacttca agtaagtttc gctttccttc gggacacaga aaaccccatt tcaccacaga
      421 ctaacatcaa agtctgattt ggtcaggcag gcccgtggca ggaggcagga agctgtcaca
      481 ttcgtggg
//
LOCUS       KCPA01002139             423 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 235340tic ultra-conserved element locus
            uce-6253, sequence.
ACCESSION   KCPA01002139
VERSION     KCPA01002139.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 423)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 423)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="235340tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>423
                     /note="ultra-conserved element locus uce-6253"
BASE COUNT          114 a           66 c           84 g          159 t
ORIGIN      
        1 aaatgaacag ttttgcttct taggaattct ggggtacctt ctgtgatctt ctctggcata
       61 tagacaggct tcactattaa cagagttcct tgagtgtatc ttgctcttca ggttgatgta
      121 ctgtattagg atttgttgta tattgtacga tacacacatt ttgatctcat atgtaaattt
      181 gcattaattg ctgactaaca gcagatattc tatttaatgg cttcttctgg ctgtgggatc
      241 atagatgttt aactgcatgg atgtatctct gcagaatcag aactagcaat tgtgtgattt
      301 ttacaccaat aaaacagcac aatattttaa ttttgttgat tcatctttac ctgggaattg
      361 aaactcattc aaataaaggg gagggtttta ttacaggttt gcaggtcatt ttgtggcatg
      421 tac
//
LOCUS       KCPA01002140             778 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 235446tic ultra-conserved element locus
            uce-3918, sequence.
ACCESSION   KCPA01002140
VERSION     KCPA01002140.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 778)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 778)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..778
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="235446tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>778
                     /note="ultra-conserved element locus uce-3918"
BASE COUNT          233 a          178 c          139 g          228 t
ORIGIN      
        1 aaaagttcac tcactgtgtt agttttatcc cactcccgat taatgctgaa cattttaaca
       61 attatgtttt ctgaggctgt ttacacatgc agacttcata ttttttcaga ggtgctctag
      121 catagagctc gtcttgtttt ctaccaacat agatgctata aaatcatgct tgattcagtt
      181 tactcccctc ccctcccctc ccttcttccc ttttcctcag ccttatcctc ctccatgttc
      241 ttgggtgggc agattcatgg ggagacttgg tttttagcat agccaccacc aggcagtttg
      301 ttactctcct gaagcacatc tgggctttat atcaggcctt taattaatcc tcagtgaaag
      361 ccaagctatg acattttgac tgggcaggct ccagttttgg acaggtcttg atttattgcg
      421 actgagtctc aacctacttt gatttatttc agctttgggg aggagggcaa gaactgaaca
      481 gaaaaagcac tgttggatgc agaacatgtg atgcacgtaa aggacctcca gagtactgtg
      541 gaccaaatga caaacagctc agacaattta caataaaatt aaatcactga tgaaaagaaa
      601 agaaatcact taaagcaaca actaccacta tgaaaacgag caacaacaaa taataaaaga
      661 cttaggatca aatgatctgg cagaactaag gaagctcatg ccttatctct aagtaaacaa
      721 taaatccctg gtcactcatt agcgttaatc acgcctctca tctgcattca gctaaata
//
LOCUS       KCPA01002141             700 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 235556tic ultra-conserved element locus
            uce-883, sequence.
ACCESSION   KCPA01002141
VERSION     KCPA01002141.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 700)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 700)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..700
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="235556tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>700
                     /note="ultra-conserved element locus uce-883"
BASE COUNT          148 a          185 c          184 g          183 t
ORIGIN      
        1 gctgtgcaga agggcagcat tggcaacctg ctgggcttcc tggaggacag cctggccgcc
       61 acgcagttcc agcagagcca ggcggggctg atgcacatgc agagcccgcc cttcgaggcc
      121 accagcgtgg acatgatgcg ccgcgccgcc cgcgcgctgc tggccctggc caaggtggac
      181 gagaaccact cggagttcac cttgtacgag tcgcggctct tggacatctc cgtgtcgcct
      241 ttgatgaact ctttggtttc acaagttatt tgtgatgtac tgtttttaat tggccagtca
      301 tgacagctgt gggcccccgt gtgcgtgtgc gtgagtggag ttgcccttta tttatgcaaa
      361 accacctcag aatccactgt ctgccctgcg ctgtcctgct tctccctcgg ggtgcccttc
      421 aaacccttat taaaggagac aaagttctgt ctacatagaa gacttttttt attttaacca
      481 aagttactgt cgtttacagt gagtttgggg ttgccgtgtt atcccattga caggcaccac
      541 tttcataact ctctgaagga aaagtgactg ctgaactctg tgtggatcgt tgtacattca
      601 caatcttgca ggaaccaaga agttaccagt tgtgaacaga ccttgtccaa gggaggcctg
      661 tgcagtagcg tgtagaactc catgtactgt acaccttaaa
//
LOCUS       KCPA01002142             802 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 235665tic ultra-conserved element locus
            uce-2040, sequence.
ACCESSION   KCPA01002142
VERSION     KCPA01002142.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 802)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 802)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..802
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="235665tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>802
                     /note="ultra-conserved element locus uce-2040"
BASE COUNT          248 a          169 c          146 g          239 t
ORIGIN      
        1 ctgtattcac ttgttgcttg ctgtacacag ggaaggcaaa gcagcattta ccacgctgct
       61 aaagttctga attaacagct gacgtttttg acctggctcc cattagctcc cattaccacc
      121 tggtaacagc ctgccttcca catgctgtac ttcacagata tcagccatta tccccacccc
      181 ggatcagtcc ccaggcagta tgctaacagc ctcttctaca agccaattta caaggatctg
      241 gtcatgttta cattagcctt ctcccaatgc atgaaaagag aagagtgcgc ttcagaatag
      301 aaatgagcaa atatgaataa ttcaattttc cttgtggcta ttaacacatt ttccttgaat
      361 aaagtgataa taggttatca tctgtgaaat ggaaattgca taacagagag tttctggtta
      421 caccagagga aattaatttc acagcacatc tgctgggacc tgacttgtga atgctaagta
      481 tgagaaaatg cagccgttca gcttcgctac ctttataatt agattagcat gcctgcaccc
      541 atgctggaat cctcagtcta gtcaaaagaa ttactgttcc tttcttcaga tacctaatat
      601 ttgtaataat gaaatgactg aggcaattag ggaaagttag aaatgaatta tgggaccata
      661 ttatattaac cagatgctgc tttaaagtga ctgactttgt gttatctgtc tagttaaata
      721 cagtacttag ccccgctatc aatatatgta atgcatcaaa ttaacgcaca caaaaactga
      781 ctttaagtaa tggtaagatt gt
//
LOCUS       KCPA01002143             399 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 235771tic ultra-conserved element locus
            uce-7008, sequence.
ACCESSION   KCPA01002143
VERSION     KCPA01002143.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 399)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 399)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="235771tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>399
                     /note="ultra-conserved element locus uce-7008"
BASE COUNT          133 a           77 c           73 g          116 t
ORIGIN      
        1 catctgttta ctaattttct gctggtaaca tcacctccac agaaataact gaatcacctt
       61 cacattcctc tcggtgaagc cattaagcct agaaacatgc tggtttgggc aatacagaaa
      121 tcaaagtggt agcacagcag agaagatctg tgttaaagaa caaaaatcca caggctgctt
      181 caaatatcaa caaggaaccc tgaaattttc tatcaatttc ttttcatggc cttgtgacat
      241 tttcaactaa aaactatatt gcttaacatc aaggcacttt gagagagctt cagttggaaa
      301 aggtaatttt tgagtgagac tcagcagaaa aaggtaattt ttcagagagg ttcactggaa
      361 aaaggtaatt tcagaaccaa ttgctgcatt cttttgctg
//
LOCUS       KCPA01002144             667 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 235885tic ultra-conserved element locus
            uce-5886, sequence.
ACCESSION   KCPA01002144
VERSION     KCPA01002144.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 667)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 667)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..667
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="235885tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>667
                     /note="ultra-conserved element locus uce-5886"
BASE COUNT          199 a          155 c          185 g          128 t
ORIGIN      
        1 caccctcagg ctgagaccca catccccctg cacaggaaga tagggaaaag cagggaacag
       61 gcagcccatt tatcccccgc gacacccagt ccccttgcaa gcgtaattta tggtgtaatt
      121 tgggccgcat ccaacttaat aaagggccac tgcaaattag tgaacaggtt taaatgaaca
      181 gaagcaatta gtgctcagag gagcccatca aagaagttgg gccaatatca gagtgaaact
      241 gaaactgcaa gccaggagca gaggctggct ggcgcgaagt ggtgatggga aggtggtgtt
      301 taatgggaaa ggaaaggaaa ccctaaatca taaagcgtga caagggccat tgtgggccag
      361 ctgacaaatg aaaaagaatg gcattattcc tttaaataac agcagcagtt agagaggaga
      421 cagctctccc tggcttgccc tcgcttccct ggcctgctcc actcggccac gcagacagca
      481 aggaagaatc agaggtcttt attaattatt aaataacgac tccctccctg gtgtgataga
      541 taacgttcaa tctaggcgat ggattcaggc gatggaggct aatctgtaac acagcagctc
      601 cgcgtaggga tgggctctcc cagtcccaga gggaaccgat gcaggggggc aggaagagtg
      661 ggcagga
//
LOCUS       KCPA01002145             442 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 235989tic ultra-conserved element locus
            uce-4026, sequence.
ACCESSION   KCPA01002145
VERSION     KCPA01002145.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 442)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 442)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..442
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="235989tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>442
                     /note="ultra-conserved element locus uce-4026"
BASE COUNT          170 a           66 c           70 g          136 t
ORIGIN      
        1 aagaaagcct tgcataaatc ctgacagaaa aagtggattt aaatcaagct aataggttgc
       61 aaaacatatg aaatatgctt tgtaatgtgc cttggagaca catggtgaaa tccatattca
      121 aaaacaaacc agagtgattt gaagaataaa tcacttgtca tcgtgatctt taaaaatgcc
      181 agaatttaat gcaaaaatat aatcctaaca tttattgcag caaaaataaa tgtcaacata
      241 ttagacttaa ctggctaagc cttgtggtag catttctaca aagtgaaagg aacatgacaa
      301 gttgtatttc acatttctta gaataagatt tggtcttctt tatcataagc agtagattta
      361 aacactttat tttaatttat ttcacagtat tgagaaaaac attggctcag ataagaagtg
      421 gaataccata tacactttgc tc
//
LOCUS       KCPA01002146             743 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 236095tic ultra-conserved element locus
            uce-7068, sequence.
ACCESSION   KCPA01002146
VERSION     KCPA01002146.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 743)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 743)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..743
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="236095tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>743
                     /note="ultra-conserved element locus uce-7068"
BASE COUNT          170 a          168 c          153 g          252 t
ORIGIN      
        1 tggatttatc tgaaatgctg aaaataatct tcccctagat tgaattgttc tttctctaaa
       61 atagcaatga gtggaaagta tgaaacttcg gacttggcag actaaaccca gcaattcaca
      121 gggtgaagga acttcaccca cagaatgtgt tccgagttgt agttactgat gactgctgcc
      181 tgccttggtg ttctctttct ctgggctggg tctgagggga gggatttttc cagagacatg
      241 ttgctattaa atgtgtttgt attgatcttt atgtggagaa gctattcaca aggtttaaac
      301 ctgtcctccc ctccttcagt aagcgactct cccagccagc tggaggcctt ctggactcta
      361 tcagtaatat ctttgggtag gttagaacac tttcacctcc ttgttttgtt tattgatttc
      421 aatgtgcacc aaaatcttgg tgatgcaggg aacacaaaca aattttcagc cttccttcta
      481 gcttctgcct ttcttttctt ttttgttctc ctcaacttcc tgtttcttcc atcttgccgt
      541 gtgctgacct ctgacctttc cctccagtct gtctgagtct ccccttttgg gacatcagtc
      601 ttctgatact gccaggtgaa aacattatcc gctctccagc atgtgattgt attcaattga
      661 agtaacatgg aacccagctg cattgtgctg attagattct gcatttgaca gctgtggtta
      721 gaaactatct acagtgacag agg
//
LOCUS       KCPA01002147             437 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 236203tic ultra-conserved element locus
            uce-4200, sequence.
ACCESSION   KCPA01002147
VERSION     KCPA01002147.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 437)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 437)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..437
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="236203tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>437
                     /note="ultra-conserved element locus uce-4200"
BASE COUNT          158 a           97 c           61 g          121 t
ORIGIN      
        1 ttctaaccca ctttttctac aagctgacca tttaaatttg gaaaatgcaa tttacatatt
       61 acctatttta acaacagaaa aatgcagcag actttacatc aacccaatat ccttccacac
      121 tcaaatagtc caggacatct caacaaacac ttgaaatgct accaaacccc agccgccact
      181 tcacatgatt tatgatgtca ttaatgtcaa gctatcagtg gacaagagta aaagagacaa
      241 cagcaaagct gactaaaaac aaatagtttt gattaaactc aaggacgttt ggtacagctt
      301 tcagcaaaaa ggcattaatc atttccaaag ctgacctttt tttttcatcc caaatgcaaa
      361 aataatatgt gtagggattc ctgaagtctg ctgtctctgt agctggatta aaagtaatta
      421 acagcaatgc catcacc
//
LOCUS       KCPA01002148             818 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 236313tic ultra-conserved element locus
            uce-7011, sequence.
ACCESSION   KCPA01002148
VERSION     KCPA01002148.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 818)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 818)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..818
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="236313tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>818
                     /note="ultra-conserved element locus uce-7011"
BASE COUNT          269 a          145 c          180 g          224 t
ORIGIN      
        1 tctcttttaa aggttacatt tgcatttaca aagaactttc aagcaattta actacaatga
       61 attttaacaa ggcacttcct gttctcactg cttgcgtatt tttaaatttt atgagactct
      121 tctggcagag ttttgtagcc gttaagatga aagcctggat gcatgcatac ttgaaaagtg
      181 gaggaggagg aaaaagaaga ataaaaagaa gaaaggaaaa taatcaattt ggtatcaaat
      241 ttattccaaa gccgaaaagt gcattttttt ctgattgtga aagaagacat gcagggaggt
      301 caaaggtcaa gcaaagagga gacagtattg tgtaggaact gtcacgcatc accacctatt
      361 ttgacatgca cagggccgtt tgttgtctgt cgaacatgca aattaagtgc ctgctgtcat
      421 agctagccga tatctgaaag tggaaaatga gaccacctgt aaccagtgaa tggagtgatg
      481 gacaagcatt cagagctcgt catttccaac gccattcaca ccacctccga attgcatatg
      541 acatgtaaaa atcttttctt aatattcaca accgggaagt ttggggaatt atggaggctt
      601 caactgctgc atctaatggg ttctccaagc agacagctgt gactgtgagc tggcttgata
      661 attaggtgtc caggaagatt ttatgctatg aatcagttaa aagggagaaa agaaagagaa
      721 aataatggca agcaaaactc gctggaatgg aaattatatt aacccttgca tgtcttcctc
      781 agcacttggc acgattccca tgaagcaaga tttgcaga
//
LOCUS       KCPA01002149             417 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 236423tic ultra-conserved element locus
            uce-4080, sequence.
ACCESSION   KCPA01002149
VERSION     KCPA01002149.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 417)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 417)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="236423tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>417
                     /note="ultra-conserved element locus uce-4080"
BASE COUNT          132 a           75 c          103 g          107 t
ORIGIN      
        1 gaagaaggag aagctaggag aagataggaa aagctaagcg actgtcagat cagctcagga
       61 tctccattag aatgcagagt gctccagagt aattacaaaa cagctgtaat ggaaaattgg
      121 tagtcaaacc cattttccac caactagaac ggtgaatggg ctccattatg ttcctaattc
      181 tcattaactt aatttgcata ggaaacaatg aaggaatacc taatgagtta gactcagcta
      241 gcagcagatc gatacccctg tgaacagggg ttcgacccat aattacagga catgtggcaa
      301 agccagaatg tttctcctct tacatagggg agatggaaag gttggcctcg ctgttgttat
      361 ttatttaaaa gctggaaatg tggcgcctac atgggcggga atttgttgtt gtttgga
//
LOCUS       KCPA01002150             825 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 236530tic ultra-conserved element locus
            uce-6210, sequence.
ACCESSION   KCPA01002150
VERSION     KCPA01002150.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 825)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 825)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..825
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="236530tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>825
                     /note="ultra-conserved element locus uce-6210"
BASE COUNT          198 a          230 c          160 g          237 t
ORIGIN      
        1 gtaacagttg ctccgaacat ctggagtcga cactttagtg ttagcgttga aataaagcat
       61 cacgtgacga tcctgtcact tgaggtttgc aaacccagct ctagcagcag gatttttggg
      121 agctggcaca ttcttggacc cagactagtc tatctggttt aagtgtgcac cgtggttttt
      181 acaggactga atttacctgg caggtgagtg aagtcctccc gagccaggaa tcttaccctt
      241 ttgctgttgt atttgttagc taatagatgg ttgtactgat ggcttgtttt tcattttttt
      301 tatgcttttt ggtccatcta ttaataaaaa tgaacccgtt acagagtcac catcatgtct
      361 cttctcacca ccctctgagt ctgcattagc cagccaacta gccctttcag cgtcatgtga
      421 ccagcgcgcc ccatgcagct tggctggtgt cgtttcacat gacccaggca tggccagtcg
      481 tcaggttgca ccgccctttg gttcccgagc atgctgtttt ctctcagcct tctctccaac
      541 cttaaccggc agcagccacc tcgaccgccc acacattccc ggccaatcag ctcagctgtt
      601 tatttaccaa atgtcttcac aacaactaca gcagcagcct tcggctaaca aaaaagcagg
      661 aaaaatccac aacaccccct tcgccaacca actaaataca acgcaacatc tggcaaaacc
      721 ttttcagcaa attcttcttg gcagtcagtc cggcagcctc acctcaccat ttctagcttg
      781 ttgaaaccaa agacttgtaa gtttttcctg cttatacagt ttact
//
LOCUS       KCPA01002151             393 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 236637tic ultra-conserved element locus
            uce-5986, sequence.
ACCESSION   KCPA01002151
VERSION     KCPA01002151.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 393)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 393)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="236637tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>393
                     /note="ultra-conserved element locus uce-5986"
BASE COUNT          133 a           68 c           76 g          116 t
ORIGIN      
        1 cattggtatt taggaaaatc caaagctggg gtgatgcatg ctcaggtgct aatttattta
       61 catcaattaa tttcaggccc ctgatgtaaa ccaattagta ttcaacactt aatggagtca
      121 ttatctgtca gattagcttt tagaaatgct tgtcactgct acaggaccag gcagcagaac
      181 tttgctaata aaactagcag aattaatgga gtgagcagca tagataatga cttaatgtgg
      241 aacgtacagt atagaaaaga gactgaacaa ctgtcttgaa gaaattaaga tatcattgag
      301 ccggctactt tattccaaaa ctgagctcag atgggctctt tggaaacatc aaaggtgtct
      361 cactaagcct tttatttcat aataaataac ttc
//
LOCUS       KCPA01002152             633 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 236748tic ultra-conserved element locus
            uce-74, sequence.
ACCESSION   KCPA01002152
VERSION     KCPA01002152.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 633)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 633)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="236748tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>633
                     /note="ultra-conserved element locus uce-74"
BASE COUNT          190 a          120 c          118 g          205 t
ORIGIN      
        1 accaaaggag ccttgggaat taattgcagc cttctaataa acacaatggt gtaatgacgt
       61 atttaacatt actggttttt gtttgattcc aaataaattg ccaatctgct gtgatactaa
      121 aacaattacc actttgagga taattaatcg acaatttttt cacattagat catatatctc
      181 ttttgatggt cttcagctgc tgtgtattta tttttcattt tttctggtga tgtaccgccc
      241 catcagcgct gacatttaaa tgagtgagta ttcaacacaa atgtgatcgt ttgtgtagca
      301 tccaacgcgg caccatactg agatgattgc ttctgggagc catccatggg ttcccgaata
      361 ggggggaaaa gccaggcaaa attttatcaa tttacatttt tctgtgatta atttttatgc
      421 aaataagggc ccgaccgtgc tcccatctca cctgaatcat gcggatcatc aaagacaaat
      481 tgagcatcac ttatttaaaa aataggcttt aaactactct acagctgtgt tggaaaatgc
      541 taagagtggg gcatgaactt ttctaatgta acaggaatag ataagaaaat gcttctctct
      601 gcatttttgt ccacactgcg ataaacatga gtc
//
LOCUS       KCPA01002153             578 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 236857tic ultra-conserved element locus
            uce-5812, sequence.
ACCESSION   KCPA01002153
VERSION     KCPA01002153.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 578)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 578)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="236857tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>578
                     /note="ultra-conserved element locus uce-5812"
BASE COUNT          193 a           95 c          106 g          184 t
ORIGIN      
        1 ataaatccat tatttccatt ccctaaacag ggtactgtaa atcttactct gcctgggagc
       61 tgggtaaaaa cagccagtta atgtactaaa ggtcagaatt tcagaagtgc tctacaaatg
      121 cattacaact aactacaaat aatttttttt aaggggtctg gtcatgtcca agggaatgcc
      181 agctacattt ttcttaatgt atgagcacaa gttacacata acaacctaac aacacaatcc
      241 tgcctcttta atgctaatct attccttgca atctactaga tacatgtaga atcattggtg
      301 tgtatcaaga gagcaaaatc agattctgaa aatatctgaa aggatgcact agagtgtaca
      361 taataatgta ttttaatctg ccaggcctta aaattaatca tgaattccca cagagatttt
      421 aataattttg agatgatgtt ttcatatagt gatattcttg gacagagttc ttgaaatgct
      481 acatggaaat gggtggggga gggaaaaatt tgggctgttt ttcaattacc aggttagcta
      541 aaatacagat acaagagcta ctgtttaatt ggttgttt
//
LOCUS       KCPA01002154             594 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 236969tic ultra-conserved element locus
            uce-2765, sequence.
ACCESSION   KCPA01002154
VERSION     KCPA01002154.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 594)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 594)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="236969tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>594
                     /note="ultra-conserved element locus uce-2765"
BASE COUNT          157 a          125 c          144 g          168 t
ORIGIN      
        1 ttgttttctc tgtccttcag tcacagtgag gagagtctaa atatttcagt gactttggat
       61 tcccattcct tgctacacaa caacaacaaa agctatttat agcaataaca gttagcagcg
      121 atagagcagc ctcagacagc tataggcagc atctcacaaa tgttaactgc ttttgcactg
      181 aaagaccact gagaaacaaa gatcaaagca aaaccaaaag aaagattttt ttattgctat
      241 gttttacttt gctggcagac cagagcaaag gttttctgaa catttaaaag atgaaaaagg
      301 tgaagaatcc cagaagcgat ttatcttgaa gcgagataac tctagtattg ataaagaaga
      361 caatcaggtt ggttctcggt tcgagagttg ctgaaatttt tgaaggtggg ctgactgatg
      421 ttattgttgt tcttttgttg ttgctctcct cccctgccct cctgcccctc tggcacacgt
      481 accaccgtgg gtggcaccga gccccgcttc agccgtggca ggtttgcatg ggtggtttgc
      541 ttggcgcagg atttgctgca tgcccgggag ggggaaggtg gctctgggct gcgt
//
LOCUS       KCPA01002155             594 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 237075tic ultra-conserved element locus
            uce-4761, sequence.
ACCESSION   KCPA01002155
VERSION     KCPA01002155.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 594)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 594)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="237075tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>594
                     /note="ultra-conserved element locus uce-4761"
BASE COUNT          177 a          106 c          104 g          207 t
ORIGIN      
        1 ttgatgccta aatgacaagc aatatattct tgctgtcagg atgaagcagg gcgatacatt
       61 tttcatatgc aaactccaga atataattgt gtgtttgtaa aagtaatttt atcaccaaaa
      121 attaaatgac agtttcatca ctttataaaa attctgctta tacaagcata tttgattatg
      181 caaaagttaa tctgtcctgc aaaaacctat gctgcagtca atgagtatca gcctggcaag
      241 cagttactca ctggcccagc tgttctgcat agaaattgga ttgtaagcag tgtaataata
      301 aggtgttttt tgaattactt gtcttctgtt ttgtccttgc agatgacagt ttgatttaca
      361 tggatcctca ttactgccaa tcttttgtag atgtcagcat aaaggatttc cctcttgagg
      421 tactatggat atagagctgg cactgttttc ttcccatatg aatcaaacac taattattta
      481 gagctgttct agctagctgc agctttatgg ttttacagtt acatgttatt tatcaatgtc
      541 ctgcccttct ttataggcct gtaatcaaca aaaatgacca gaggttaaat ctca
//
LOCUS       KCPA01002156             634 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 237184tic ultra-conserved element locus
            uce-3772, sequence.
ACCESSION   KCPA01002156
VERSION     KCPA01002156.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 634)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 634)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="237184tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>634
                     /note="ultra-conserved element locus uce-3772"
BASE COUNT          197 a          139 c          106 g          192 t
ORIGIN      
        1 cactgtactc agcacactac aatataacat gtgcttccaa tgattcacat aagcaagatg
       61 atggaacaac tttgaactgt atatacgtgc catccttagt tttattcaga tttaattctt
      121 catgcaaaac ccaacaaacc ctaaccctta agacttttat ttactaatgc catttattcc
      181 tgaactgctc gaaaataact tgacaaagct gacggtccaa acaaagacca cacttcctgt
      241 tcttacaggg aatctggaac accatcaatg ttttgttcag cttgcataag taacaactga
      301 ttggccacag tccctgtggg catgccattt catccagact ggacggttca ttagtcataa
      361 ttactataac tgtacagcag agactgcagt tttatctcat catacatctt tgataaagct
      421 gcttctattt ctgcttcatc agcatgtgaa gttacattac tggagctttc attttccaat
      481 ctgtgattaa catcggttgt tctgcttata aaacgtgcac cggccatggc gtgaccactg
      541 tttgaactta gtgaagaaga gactctgaag aaaatttaac caaggaagta ccaacaacac
      601 agtgtaagaa aataaggctg ttggtttcta atgt
//
LOCUS       KCPA01002157             633 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 237294tic ultra-conserved element locus
            uce-1319, sequence.
ACCESSION   KCPA01002157
VERSION     KCPA01002157.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 633)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 633)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="237294tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>633
                     /note="ultra-conserved element locus uce-1319"
BASE COUNT          184 a          101 c          150 g          198 t
ORIGIN      
        1 ttgtgcatac tgataatcca gatgttggta tcaatatgct tattcatatt ttcagtaata
       61 aaacttgcct tccactttgt gggacagcga cagaagatca actggcgttg gaacagcatg
      121 tggtaactat tttctgctat gacaattatg ttgaggcata atgttccttg aattgtgaca
      181 tgcagaaatt gcatctcctt tttgtctgta attgtgattg agggaaggtt ttatattcat
      241 tttgtgatag atggctcttt cctttgcagc caaacaggga aaaagttaat ggcgaagtgt
      301 cgaatgctta tccaggagaa tcaagagctt ggaaggcagc tgtcccaagg acgtattgca
      361 cagcttgagg cagaattggc tttacagaag aaatatagtg aggaacttaa aagcagtcag
      421 gatggtaagg gaaagttgcc ttgcacttct ttttgtgatg atccatctct gtcacagtat
      481 tgagtgaaat attaactggt agtcctaatt aaaagccctt aattttgggg gaactggtgg
      541 gatttgcagc ttcagtaatg taagatttgc ttcagactgc acacatgaat tggcaagatg
      601 aaagctgtta atataaagcc taggcatgca ctg
//
LOCUS       KCPA01002158             623 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 237407tic ultra-conserved element locus
            uce-7589, sequence.
ACCESSION   KCPA01002158
VERSION     KCPA01002158.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 623)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 623)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..623
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="237407tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>623
                     /note="ultra-conserved element locus uce-7589"
BASE COUNT          189 a          112 c          143 g          179 t
ORIGIN      
        1 tcttgaaaaa gtaaggaatg attattgctg tcaaaactgg agatccagca gcctcagatc
       61 actttcacag attagctgaa aaacccagaa gaaactgccc tttctgtttc tctatgcagc
      121 ctgtctgttc ctttgctctg gtgtaatatt ccactagagg accatgggca aagcttgagt
      181 aatgctatat ttaagtatgc tttaaaaagg gcaagaagtt tctttagttg gtgcgttcta
      241 tcagaggcaa gataatagaa tttctaaacc cattgatttt atggcattaa gaatctgctt
      301 gataagtcag tctctgtata ctggtgatca ctatctccag ctgtataagc agaactgtcc
      361 ccatttcatt ttcaataaga aattgaggga gacttagatg tgctggaaaa tatggggaaa
      421 ataagtagca taaaatctct gttctgttga agtatagcat agctatctgt tattaaatac
      481 tggaggagtc agagagaaac agagttggaa gatgtgtgag caaaggattc ttaatctgtg
      541 cccccagttg acggggcact tgcaggagca ctgcctgtgg ggtactccag caccaaaggg
      601 cagcctcagg gaagaaaact ttg
//
LOCUS       KCPA01002159             611 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 237516tic ultra-conserved element locus
            uce-2066, sequence.
ACCESSION   KCPA01002159
VERSION     KCPA01002159.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 611)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 611)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..611
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="237516tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>611
                     /note="ultra-conserved element locus uce-2066"
BASE COUNT          197 a          114 c           97 g          203 t
ORIGIN      
        1 tttcttacaa gaatattttt ggaagaaaat tttccccagt attttatatg atactaagat
       61 gatttattta gctaaattct gctcatgtgt atgctcactt actgctatac attctagata
      121 aacagatatt aatttcataa ttaaaagtaa tcttgtgtaa ataccctgca ggcctcaatg
      181 aatcaaacac atactgtgtg tcaggcctcc cactgtcttc aagtggaatg tactggctgg
      241 ataattagat agtacatatt ttttaacctt atttgcatgc atattatatc ttttgcacac
      301 tgacaagcag cagtaacaac aaaagtcaga ttaccacagg gaattcccac aaagaagtct
      361 tcatttctta taatttgcag cctaaattaa aataatttga tctttgacaa ggatgaaatg
      421 tcaagcagaa gggggtcctc tacaagccac ggcctgtggc ttctgaaatc tgcctaattt
      481 atgtcagtca cttcttaata catatttaag tattacacga gaaagatgat aaatatgcaa
      541 tctgacacct ttggtatttc cctgctgtta atttataaag gtctggcgtc ccccaaactg
      601 actggaatta t
//
LOCUS       KCPA01002160             759 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 237628tic ultra-conserved element locus
            uce-2166, sequence.
ACCESSION   KCPA01002160
VERSION     KCPA01002160.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 759)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 759)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..759
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="237628tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>759
                     /note="ultra-conserved element locus uce-2166"
BASE COUNT          227 a          156 c          152 g          224 t
ORIGIN      
        1 tggatccttt atgaaagtta aaattggttt gtcattttct ttttgcttct cacaccttat
       61 ctagtttcta cattcttccc acttcagcag tcaaagtgat tgaaagccga aaactgagca
      121 gatctgtccc tgcagcaact ttcctcgcgt ttctcattta ctgttttatc aaacgggctc
      181 tttgtctttg cagtcccctg atgttgcctc tgttacacgg tgatattctt caggtcatgg
      241 gggttaaaag ggggctaaaa aggagatcat actggacttg ctttacacag acatgtagca
      301 ttagacccaa tgcccaatag aggaaagata tactactcct atttgatgag cagcaggcca
      361 ataaattcat taatcatcat tttatgcctc atcaaacact acccaagttc ctccatggga
      421 gttatacaaa ttagccactg aaaaggcagt aattttagtt tagctaggta agtgcttttt
      481 gattgccttc ctgaacaatg cttcccttga caagctaata aatcagccct ttctgaatca
      541 gaagtgcagc aagtgcgaac aataactcca catagtttct ccgctgattt cagctggaag
      601 gcctaagagg atgatctggg atcaaagtct cttactttat tgcagagcaa aagctttctt
      661 tatgaagaag agctacagag aaatgaggga agggggaaat caattaatga gagaaaaagt
      721 cctgaaacaa aaaggaggct aagtctccaa ttgcaggga
//
LOCUS       KCPA01002161             328 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 237733tic ultra-conserved element locus
            uce-2193, sequence.
ACCESSION   KCPA01002161
VERSION     KCPA01002161.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 328)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 328)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="237733tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>328
                     /note="ultra-conserved element locus uce-2193"
BASE COUNT           94 a           65 c           81 g           88 t
ORIGIN      
        1 aaaaaagcca tcaccaaaac ttgttgagga aagaattaaa gccatctgcc tgaaagcatt
       61 gtgtaaaacg tacacacaat gttggggaaa taagccaatt atgtgtgctt cacaggaggt
      121 actgaccttt gtgtataatt agttctttta tttaaagcaa agattttgaa tagaataact
      181 aattagctgt cataaatggc aaattgaaga ttttggccgg attccttggg gagagtggga
      241 ggacgtccct cctcgcagcc cgtaccgcag gctccggctc tgctcattag ggctgctctt
      301 ggctctccgc ggtggtaatg aggagcgc
//
LOCUS       KCPA01002162             624 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 237839tic ultra-conserved element locus
            uce-6695, sequence.
ACCESSION   KCPA01002162
VERSION     KCPA01002162.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 624)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 624)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="237839tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>624
                     /note="ultra-conserved element locus uce-6695"
BASE COUNT          191 a           93 c          124 g          216 t
ORIGIN      
        1 gaaaaataaa ctctacttga agtctttgat tttcttccag tgcatttcct tttttaacag
       61 taggaaaacc taataaaatt gtattaacat aaagaataac aatagctgga gcagatttaa
      121 tattgtttag aatattttaa atgtaaatac tctgtgaaaa tatagtagtt gatgttacat
      181 tttcattgct gcttgatttt gtttgtagag ccagaatgaa gactggggag gtttgtctga
      241 ggatatctta tgattaagag caatctaagg cattagccct tttgacccca tctaaatgat
      301 tggtaactac caagtttacc attttggtgg catggattaa atgggtgcta tgcaaagagt
      361 gctgcacgtg taattgcaag ggtaaactgg gtgatgggcc tgcaacactt gcatgatgtt
      421 ttattttccc tttatgtact aaccgcatcg acttgaaatc tctgacttct actggctttc
      481 tttggcgttg ataattaagt gggataatgc aagttagaga aatggatacc aaagctaata
      541 actaaacaga tgtttggctt tgtttactta caatcagccc atataaacat gtatttattg
      601 ggaaatgagc tgtttacatc tgct
//
LOCUS       KCPA01002163             576 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 237945tic ultra-conserved element locus
            uce-2941, sequence.
ACCESSION   KCPA01002163
VERSION     KCPA01002163.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 576)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 576)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="237945tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>576
                     /note="ultra-conserved element locus uce-2941"
BASE COUNT          177 a           98 c          117 g          184 t
ORIGIN      
        1 tctcggggac agctttcact gtaaataaaa aaaaaaagag cagaaattaa tgtttgtggt
       61 cagtcccaag caaccacact ctctaatgca aagcaattgc atttttacct gaaatctgtg
      121 acagatagct gaggcactaa tgtttttctc tgttaataag ctggatatgg aacagagctc
      181 ctttagaata tgtacggtaa agtggaaatg catgctttgg tgactgctat aaagcaggcc
      241 aaagatatgt caagtccaat taatgtcaat aaggaacatc tgtatttagg cacccaagtt
      301 acttaatgca aacatttcat aattatatac tatagcacac atggagcatt atgagatgtg
      361 gtgtcccagt gtgaataata ttcacatttt tcagatcagt cagcagtctt ggtctggctt
      421 tggctcagct tgcagtctcc ctgtaagagc atttctttat aatattgaat taagtacaat
      481 ccacattttt tctcttatct gtgaaatctt gtggttgtgg cttgactgtt tttataaaat
      541 gaaagatcca agtgcatgta aagctggggg tttggg
//
LOCUS       KCPA01002164             573 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 238053tic ultra-conserved element locus
            uce-4865, sequence.
ACCESSION   KCPA01002164
VERSION     KCPA01002164.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 573)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 573)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="238053tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>573
                     /note="ultra-conserved element locus uce-4865"
BASE COUNT          176 a          109 c          103 g          185 t
ORIGIN      
        1 aactttccca gtgagaaatt ttttgttggt tggattttat tgctagtgaa atatatgttg
       61 ttgtgtcacg tcacaaacag agaactgttt ttaaatcctc agcactgctg acacttccaa
      121 caagtacttc cgtattggtt tcggtcttat ctgtttctaa cagacagcct catgccttgg
      181 aaatctgacc tgaaagaaaa attcagcccc aagtatctgc tgtcaattgc gcagaaaata
      241 ggagatgaca gcaaagtcac tcctgcatgc caaattagat ctctttccaa catcttctaa
      301 tgtcattatt agcactcaaa tacactgtgt caaaatgtgt ccgtataggg agatggacca
      361 ggcaacatca aatttatctc ttagtcaata tgacaagctg gttttgattc agacttctaa
      421 ataagagaga ctcctgctcc atcattttgt ttacaaatat ggatattata atagatggaa
      481 ctgtattatg cagttctatt gaatttctgg aatcaatagt gtaataggag ttaaaatcat
      541 caatgtgagc cttctccaaa tagtcaatgg tgc
//
LOCUS       KCPA01002165             680 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 238162tic ultra-conserved element locus
            uce-5505, sequence.
ACCESSION   KCPA01002165
VERSION     KCPA01002165.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 680)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 680)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..680
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="238162tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>680
                     /note="ultra-conserved element locus uce-5505"
BASE COUNT          209 a          119 c          131 g          221 t
ORIGIN      
        1 tttttccttt gctgctgaac tttttaaaag aggtctctaa ttgaagagag atggaagcca
       61 ggcctgccaa aggatggaaa tccataatat ggatgccagt gaacttatta tgaaccataa
      121 tgtccccaat gacaaaggaa tcaaagagag aagcaccgta cctagcagta cagtacaaca
      181 cgatgaactg actgaatgca gtattagatt tcataggagc agtctcacga ctaaagcgac
      241 gatgcatcgg ctgcttctta tcattgcatt ttccatctag atcagttaca gccatttgat
      301 tccttaattg ttttttcaag tcttccagat atttcttagg ttagctacga tgtaactttt
      361 tcagggaata gtttaagctt tattcattca tgcaatacta aagagaaaga aatactgcat
      421 ttttgtgctg gcttgaacaa tgatgaacaa taatgaagga caaatgaatc ctgaaggaag
      481 atttttttaa atgttttgtt tcttcttact aatggagatt tttttgtacc agctttacca
      541 gttttcagcc atttattaac gtgggaattt atcttactaa agcaatagtc gaagggaagg
      601 tgcatattat cacggatgca atttatgttg tgtgccagtc tggtccaaaa catccagttt
      661 cttaacatga gctccagttt
//
LOCUS       KCPA01002166             472 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 238266tic ultra-conserved element locus
            uce-5240, sequence.
ACCESSION   KCPA01002166
VERSION     KCPA01002166.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 472)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 472)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="238266tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>472
                     /note="ultra-conserved element locus uce-5240"
BASE COUNT          184 a           66 c           75 g          147 t
ORIGIN      
        1 agaagcagaa aaataaaaat gagtgcaaaa ccaaaatatg atactacagt aaatatttaa
       61 ctatttctag attgtgaact taacatttta aacatctgtt agttacttat atgttgaaat
      121 atatgcaaaa atatttagcc aaattgaagt cttaggccca tgacaatcat ctcaacacag
      181 tgggtagttc tgaaaattaa tgagaatgat aatactgtaa agactgttcc agagtttgcc
      241 caaattcatt atctaagact cttgttaaga acatctcaaa gaattttaac caggaaaata
      301 tattaatggt tgaaaagcat ttttcaaaat ggtgatttat aaaagtataa tggaattata
      361 tatgcaagag ctgtagttag aaacacaaat aacacaggag cagcacatta tgaaggaaca
      421 ttttccaata gctcttggct ttgattttgt ccacaggtgt caagatttcc tt
//
LOCUS       KCPA01002167             755 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 238379tic ultra-conserved element locus
            uce-4117, sequence.
ACCESSION   KCPA01002167
VERSION     KCPA01002167.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 755)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 755)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..755
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="238379tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>755
                     /note="ultra-conserved element locus uce-4117"
BASE COUNT          235 a          134 c          138 g          248 t
ORIGIN      
        1 aaattctgta tttagtatgt aggcttttat aaacataaaa tctgaaaagt ccttgtgctt
       61 aaactttttt tcctgttaaa cagaattagt tgcttacttc caatactgcc actgtaactg
      121 atattacaac agatcacaat tttcacagac acatcaacat taaaacattt acctatgaga
      181 aaataagtca cttctcatta gttcacagtg cgaaaaagtg gtgtacactc tgtcttgaaa
      241 aaggctttca gttattcatc aagccagaaa agtcctgatg ccagatgcag tgctagattt
      301 aaagaatgga aagcaacaca tcacatgttg ggaggaaaaa aaataaattt ctcgtttctt
      361 catggatatc gtctaagtga ccttcgtctt ctgttgtaga aatgcctgag cccatgttgc
      421 cgtgaaaaat tcatcatgta attttgtttg cgagtgctgt tgaaatcaaa gggtgaaaga
      481 agagtgtctt ttatatgtaa tgtaaattct tttggcagtg agctagtggg actgattctt
      541 tccttgcacg acttttcaag tctatgcaaa ctagtgtgaa gcacaaggca attgagaatc
      601 tgtcccactt ggctttcatt taaaataagt tgaagagctt tcagctaatg aaaactggtg
      661 ctgcctaggg ccagattcac taaaactata tgcacacttc atagcagggt tttatactcc
      721 agttatcctt ttgatcatga actgctttat tttgt
//
LOCUS       KCPA01002168             579 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 238488tic ultra-conserved element locus
            uce-3815, sequence.
ACCESSION   KCPA01002168
VERSION     KCPA01002168.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 579)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 579)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="238488tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>579
                     /note="ultra-conserved element locus uce-3815"
BASE COUNT          183 a           97 c          154 g          145 t
ORIGIN      
        1 aaatatgcag tgtgaagaac aatttcccag aaatcatggt gaagggagaa gaagggtctc
       61 gtctgaagtc taaagcttcg gggggaagga aaaacaagaa atagtaggtg gggggaagag
      121 gaggcaaaac tgcctcttag ggtctgggat acagcacatc tctgaaactg ctgagaggga
      181 tgtagccatc tctgcaaatc aagatgagct ggctggccaa tgaagcatgc ccggcatttt
      241 atttctcata ttgtttggag atagggattc agctgagtgc attcagcaaa taaagatcaa
      301 ataacctgct gtgaataatg ttttaaacct gggttcctat caggatctag ttataagccc
      361 atatactctg ttggataaaa aataagttac acatggctgg aggcagtatt actttctaag
      421 gaagatgaaa tctgttttga aatagaaaat gtttagtgat tccccctcct cgtagggtaa
      481 accacataaa gctgcctgat gaagagggtg gaggagggtc caccaatatt tcacccactg
      541 tgggtccaga gctaaggatt tatgctaaaa gagggggtg
//
LOCUS       KCPA01002169             448 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 238593tic ultra-conserved element locus
            uce-6286, sequence.
ACCESSION   KCPA01002169
VERSION     KCPA01002169.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 448)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 448)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="238593tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>448
                     /note="ultra-conserved element locus uce-6286"
BASE COUNT          162 a           86 c           60 g          140 t
ORIGIN      
        1 ttttaattac aactcgattc tctgcaggct gaggatcagt aaaagttcag caacagatgc
       61 tttgggcaca gataagaagt acctgcaatc atttaacatt gcaaagagaa ttctgatgct
      121 aatgagggct aaaaattgga tccacaagtt tacagagtac accaaactga acaaaattgt
      181 cagcataaca tttaaattac ttttttgata agcttggcta tttacaaatc atcagacaat
      241 tacatcttcc aaaaactatt taacatcaat tcactctgcc ttttcaacac tgcacttgat
      301 taattccaaa taaattgaaa gaaattacct tgcagattgc aagaaaaaaa caattgctac
      361 agttttaaat tgcgtatcgt taaactaact ccgcataata gttttcattt gcattatctt
      421 ccatgctcca aatgttaact atttcaca
//
LOCUS       KCPA01002170             614 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 238698tic ultra-conserved element locus
            uce-6790, sequence.
ACCESSION   KCPA01002170
VERSION     KCPA01002170.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 614)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 614)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..614
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="238698tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>614
                     /note="ultra-conserved element locus uce-6790"
BASE COUNT          174 a          111 c          118 g          211 t
ORIGIN      
        1 tttcatggct gcaatattcc ttttattcat ggagatttct tcaatcttta ccactaagtc
       61 atgtgaaaat ctcagtgtct gatacagaaa aaaggcaaac tgcatctcac tttggatgtg
      121 atacagcagg tatgcaaata aacttaagga gaagtcagct atgtcaagct ctttctgtat
      181 caacatttta tgtgagtgat tgccttctct ccttacaggt agattttgcc agtttgtaca
      241 tcaagatgag tgccaagaac atgcccacag tgtttttgct gacagatgcc caagttccag
      301 atgaatgctt tcttctgctg attaatgact tgttggtatc aggtgattaa accaacaaat
      361 ttcttgaaag atcttttcta atgacaaatg atctgtgttt tcattgaact ttaaagagat
      421 tatttctctt tcaggtattt gtagggggaa atttcagaga ggctatgtca agccatccaa
      481 cttgacattg ttaaggctta aatgagaatg tccctttgac ttagtgttat ctgctttggt
      541 gtgtcactaa tttcaagcaa tgtccccatg acttagcatg tagcaatgaa gtttcaccca
      601 tgttagagaa tctg
//
LOCUS       KCPA01002171             385 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 238802tic ultra-conserved element locus
            uce-1466, sequence.
ACCESSION   KCPA01002171
VERSION     KCPA01002171.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 385)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 385)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="238802tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>385
                     /note="ultra-conserved element locus uce-1466"
BASE COUNT          114 a           59 c           79 g          133 t
ORIGIN      
        1 agtttgggtt actctgacat tagcaccttt tatatttaag tttccaaaca gcaaagagta
       61 ttaactgtgt tctgcatcta attattggta actacaagtt ggaaagttgt atgaaagaga
      121 cagcaaggga cccactttct agatttgcct ttgctcatgt tatctaccaa aattgttaat
      181 tcaattatga aatgtgggga aaagtgcagt ttacttatat agttgtaaaa taggtgcatg
      241 ttcagaaggc agttgcagaa atccattcta ctcattcttt gtgtcaggat ctttgctttg
      301 tttcattgca gtaaactgtg atcctaaagt ccatcaatat gaccgaaaga agttttggag
      361 ttgagaagga ttccttgagt gctgt
//
LOCUS       KCPA01002172             394 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 238911tic ultra-conserved element locus
            uce-7516, sequence.
ACCESSION   KCPA01002172
VERSION     KCPA01002172.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 394)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 394)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..394
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="238911tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>394
                     /note="ultra-conserved element locus uce-7516"
BASE COUNT          112 a           69 c           76 g          137 t
ORIGIN      
        1 atttggtcat tataatcaag ggctattata gcaatagatc ttatctctag aatggcagtc
       61 cccttgcacc ttcagttcag atttttgttt atgcttggct gcaattgtgg ctgtttctga
      121 tagttttagg tcagccatga cagactatgg gtgacactaa ataaacaagc tgggagtctg
      181 cgactaggaa ggaatgatac tggttctcag agcttgattt tctctggtta atcaacaatt
      241 tattcagaat aactcactgt gaaaagtaac tgtttgagag actactcgta tctcccctca
      301 caactcacat atgctagcag aaagaagaaa tcatgcttaa ttttgttttt tacagcaggc
      361 tacagaattt atttgtttat ttgatttatg ttca
//
LOCUS       KCPA01002173             657 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 239017tic ultra-conserved element locus
            uce-3689, sequence.
ACCESSION   KCPA01002173
VERSION     KCPA01002173.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 657)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 657)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..657
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="239017tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>657
                     /note="ultra-conserved element locus uce-3689"
BASE COUNT          196 a          127 c          124 g          210 t
ORIGIN      
        1 ataactccta atatcttcag tcgctttcac acacaatgtg cttactgaac taatgcctta
       61 tattttcctc tgaatagaaa cccctcctgc ccagaccttg tgcagctgag tgcagtagac
      121 aatttcaaag actgctcttt ctatttaaca atcagtgcat taggctaaaa tattcacaca
      181 gatgcactag caattgaaag ggtgtgcagt gtagtgacaa ggtccttctg ttacctggac
      241 cgtagaatga tgaatgagca ttagtggaat attcttttgg cctttaagtt taccttgatc
      301 ttctcacaga atgcaaattg acactatacc cacatttcta tagtatttat tactgtggtc
      361 atgatgtgag ggcttttttc aatatgaata gtgtaaaagg ggaaacatat tactgcaaag
      421 aggcattatt gtgctgggaa tgtataaaca gctgagaaga atagagcgac atgctcataa
      481 tggaaactga aagctcttca ttttgtcctg attgtctacc cttccttttt aaacaacctc
      541 cctttttcct agctatcaat acaaagttct ttttggtaaa atgaagtgca ttcatgctgc
      601 ttgaaagaag cttttaaagt tgatctgtgc ccacacaaaa gagaggcagt gtttgag
//
LOCUS       KCPA01002174             603 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 239128tic ultra-conserved element locus
            uce-4855, sequence.
ACCESSION   KCPA01002174
VERSION     KCPA01002174.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 603)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 603)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="239128tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>603
                     /note="ultra-conserved element locus uce-4855"
BASE COUNT          193 a           97 c          129 g          184 t
ORIGIN      
        1 aacgtgcatt catagaggca ttttttaacc tgattcttta ccctctccct ctgtcacctc
       61 ttgaaaagtt ttacagactg gaactgtact tgaatttagt ctaattggaa ggaaatttga
      121 ggcccaaatc attggcatgg agacacttgc atacaatcac agtatgcaaa acagcagaag
      181 tctgaattca taattggacg ttccaaaatg taattatgaa agatgaaatg ctcctttcaa
      241 tgagaaggct gtaaatagaa taattaattt tgtgtttgct tgaacaattc tgtattatgg
      301 accttacact ggaactgaaa ttaattaagt gcaccaggat ttatggagga ggtgaagaga
      361 gagggaaaaa aaggaattaa tctgaagtaa aagatagatg actttgtgag tgtaatgatg
      421 cgttagtctg gggtattctt taacaaattt agcaggcatg ttctgggtac aaacagcact
      481 cactgacaga attatctcaa ctaatgcagc tgctggactc tgagcaaatt gagattgcag
      541 atgagtactt tagatttaga gctattaacc ctctgtgtgc tggagatgtg tttccattcc
      601 ctg
//
LOCUS       KCPA01002175             347 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 239231tic ultra-conserved element locus
            uce-1621, sequence.
ACCESSION   KCPA01002175
VERSION     KCPA01002175.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 347)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 347)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="239231tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>347
                     /note="ultra-conserved element locus uce-1621"
BASE COUNT          109 a           62 c           83 g           93 t
ORIGIN      
        1 aatatattcc gatttttttt cttgtcatta agccagtgcc tcggagatga tgatgtagtc
       61 cctatgtggg ccgcagaaag cacttcgagc cgtgctggag tcgtgctggg tggctctgat
      121 agcagagcta atgggagcga atgggatgca acgaactgtt ctaatgacac cagccaggga
      181 agagacaaca gtaagaataa ataaatgtta actattttcc tcttccagac atttgcatct
      241 attgccatta agttcattta aataagagag agagcgagaa agaaggggaa acttactact
      301 actcttaata accagtgtct aaaaataaat taggatgctg ggatgca
//
LOCUS       KCPA01002176             336 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 239339tic ultra-conserved element locus
            uce-7461, sequence.
ACCESSION   KCPA01002176
VERSION     KCPA01002176.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 336)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 336)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="239339tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>336
                     /note="ultra-conserved element locus uce-7461"
BASE COUNT           59 a           84 c           85 g          108 t
ORIGIN      
        1 ccaaggtgag ggcgccgcag gatgcgggga ggaaacccgg gaaccgagat tggcccgcta
       61 agatcagaaa ggctggcgag cacagtgccc tattgtggag ctgtcacact tccctttact
      121 ttattgcttt tgtccaacac cccattgttc cacttccttt tgtcccctat tcacagccct
      181 ggcttttcat tacccagccg gccttgttgt tttcatttct tttgtttgaa gttcctgaga
      241 ggaaggtttt attttcagcc gtttgattaa ttcgcagctt gagctttgtt tgttatgtaa
      301 ttgctggctt cgcaccccca gggtgctggg tttggg
//
LOCUS       KCPA01002177             571 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 239450tic ultra-conserved element locus
            uce-5111, sequence.
ACCESSION   KCPA01002177
VERSION     KCPA01002177.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 571)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 571)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..571
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="239450tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>571
                     /note="ultra-conserved element locus uce-5111"
BASE COUNT          123 a          144 c          204 g          100 t
ORIGIN      
        1 gaaagggagg tgacagcaag cctggccctg aagaagggag aaaacaaatt actaaatatg
       61 ggagatgcat ggaaaggagt cggtttggag gaacaaagga gggacaacct gcaggcaagc
      121 agcccgggag gcatccggga ggcagggaac cagcatccag gaatgggatt ggagacggag
      181 ctggtgagac ctgcccgagc tccgctcact gctgttgggg accgcggggt cctcacactc
      241 actgggttgt tttctggatt tcgaggagcc cttggatgac tttttgggct tctttatccg
      301 ctggtatttc agagcttcga gcctctcagg tgcagcagtg tccccgggcg gagatggacg
      361 ttttctagga aggaaaacgt gccatcagcg gctcccggcc acgctctctg gacgtccccg
      421 gtgggggggc cgatcccagc cggctctgcc gtggaaaagg aagaggtgag aaacccaggg
      481 ccgagggagc agggccagcc aggcgtgcca gagcgcggga tggaggaagt gaggcgtccc
      541 cgctgtcccc ctcctccggg ttttcgagcg g
//
LOCUS       KCPA01002178             558 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 239560tic ultra-conserved element locus
            uce-6756, sequence.
ACCESSION   KCPA01002178
VERSION     KCPA01002178.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 558)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 558)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="239560tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>558
                     /note="ultra-conserved element locus uce-6756"
BASE COUNT          204 a           95 c           92 g          167 t
ORIGIN      
        1 gataattaaa agtatctaac tcaataaaaa tctaaacttt catggataaa ataggaatga
       61 gcatccatag tcttcaaata caatctgttt gcaattacca aaatgaaata atatatatta
      121 gatttttatg gctttttttt gcacttccca ggaagttctt ttttctctaa gttactaaaa
      181 gcctgaggtc tattagtaac tccccccact ttcaagctaa ttaaagtagt agaggcttgg
      241 aggtttaatt ccccagagcc aaagctcagt gtgagaaagg taatttgtct gtccagaaca
      301 aagattaggg agcagccagc aagcatattt aataaatgag catcaaatat cttctactat
      361 ggacatagac aacaccaatt atgtaactac aattgttgaa tgatatgtaa actagacgat
      421 ttttaagatc ttctctaaga gacttaatgt aactcatgca gaagctgaag acaagcattt
      481 gttacaaaca ttgccaacgt ggaaaattta gtaggtggca atactgttgc aaacaagaaa
      541 tactacagga atactacc
//
LOCUS       KCPA01002179             713 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 239670tic ultra-conserved element locus
            uce-7701, sequence.
ACCESSION   KCPA01002179
VERSION     KCPA01002179.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 713)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 713)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..713
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="239670tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>713
                     /note="ultra-conserved element locus uce-7701"
BASE COUNT          240 a          137 c          139 g          197 t
ORIGIN      
        1 aaatgaagcc tctagaagag tgctgaggtg ttcatcacct gggtcaggca actggagggg
       61 aatcagtgtc agacacaagt gaacgagaag gtagaaatgg agaactgtga acagcaagcc
      121 aagaaaccta caatgcactt cttacaaagg gctgtaaaat tcacatttat tttctaagta
      181 tgagatagat gggttattcc tacacataga ggtgcccaag taaaatcaag ataagtgata
      241 ttaatgtcct atggtcagta ttattgaacc tcgaaagcaa taaagtatga gtcgataaat
      301 attacatttg caacatagtt aacattcttc tactgtctct ggcacttatt acacattgta
      361 accgcaagtc tacaatacat tattcatatt tggggtgtca ccgagtgatg gattgctgta
      421 agagaggctg tcctttaaat aaatcaacaa ataaaaatgc aaatgttaac attttcagcc
      481 acaacttttt ccatcttgaa tggggaatga aaatttcaca ttatatcgac agccagcaga
      541 gagaacaatt aacaacctac acagtgaata agagagatta atttgccaat gtctggtttt
      601 atcacttgca tatggaacta catttgcact gctggctttc tcggggagca ggcaaaagtt
      661 gtgagtccta ccacattcag actcacctcc cactccaaac acactttgtt cct
//
LOCUS       KCPA01002180             670 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 239781tic ultra-conserved element locus
            uce-2287, sequence.
ACCESSION   KCPA01002180
VERSION     KCPA01002180.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 670)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 670)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..670
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="239781tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>670
                     /note="ultra-conserved element locus uce-2287"
BASE COUNT          174 a          165 c          130 g          201 t
ORIGIN      
        1 accccaaaat ctccttttat agcacaatcc tcttagcact tatctctccc ttcctcatta
       61 atccagtttc accccaacac atgcagagaa ggggagggag atatatatac cttctgttct
      121 tcttgacctt tctgatttgg ttcagcattt atactagccc acctgtctgg acaatctccc
      181 ctgcaacgtg cccttaaaaa catagtttga taaggcacag cgacaaacct tgcagagagc
      241 aagcgtgtga gcaaaaggga gagaaagcac tgagggaaat cttctaacca ggatctgctg
      301 ctgcacagct aatcaggcag gtattcagtt gttcactcct gcagacttgc ttagcataga
      361 aataggctgt ctgcccagga agatgaggta atgtctaggt ttaatgccaa tctctgtaac
      421 tggcaggaca catcgggtaa atatttctgc tgcaggagac cacattaatt tgattttgct
      481 acccattttc attattgtta ttatttctat tgctatgaat atgcatgagt ttacctgcta
      541 acgctgaggg ctccaggtga ggcagccttc atgctgcagc actcacactc ctccctgtcc
      601 tttcatcttc tttatgaagg accaggcatt tgtctgctca gttatctcct ctagtccatt
      661 tatgcaatat
//
LOCUS       KCPA01002181             503 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 239887tic ultra-conserved element locus
            uce-1770, sequence.
ACCESSION   KCPA01002181
VERSION     KCPA01002181.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 503)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 503)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="239887tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>503
                     /note="ultra-conserved element locus uce-1770"
BASE COUNT          156 a          104 c           71 g          172 t
ORIGIN      
        1 ttggttttga aacattaaga aaggtaagat cttacctaaa gaagtttaac tgaagcttag
       61 aactattttg ctctacaccc tcagccttcg ttgccatcct tataaacaat ctaccgtaaa
      121 gctttgcaga gatacagcac agctttttaa gactggctga acttttagtg acgttttcaa
      181 gagttctctt gtactagacc tgcgtccctg gaagagtacc ttgctgtttt cctttccttg
      241 ccattgaaga agcagcatct aaaaaatcta gaaaggtctt gcagagatac cccttaagtt
      301 acctagatat tttaaacctg gtaatttaca gacaacattc tttttctcac cagcatttta
      361 cacgtacaac aatagctttg tattatttgt gggaccttat actacccact ccttgcctta
      421 ttttacagta ttaaaaaatc taaaattaca caatatttcc tttagaatta ttttattaaa
      481 atcataaatg tacaacagct tct
//
LOCUS       KCPA01002182             599 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 239999tic ultra-conserved element locus
            uce-4434, sequence.
ACCESSION   KCPA01002182
VERSION     KCPA01002182.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 599)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 599)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..599
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="239999tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>599
                     /note="ultra-conserved element locus uce-4434"
BASE COUNT          199 a           96 c          113 g          191 t
ORIGIN      
        1 acagagaaat tgatctgaat gaaaacagta caggagcttt tcagggtctt ctttctaaat
       61 ttattcaagt attaaacaaa cagaaactac agcatgcatc agatactttc ctttattgta
      121 caacaaaact gtggacttgt ttgtatttgc agcatttcca gcaacatcag gcagacttgt
      181 cgatgttatc cagttttgca cagtcactag agtgtcgcat catgaattat taaatcagtg
      241 cttcgtggta atacataatt tcttatcaat tattcatgct aatgtgcgtg tagtttactt
      301 aattgtgtta ttgacgatca aaagtaattt cctgaaaatc ctcaaggaca gaaaatttaa
      361 tcagcgtaac tacttttcag atgcaatgct gttaagtatt cttaatttgc tcaacaattc
      421 acttatttat gtacctttct ggaggaaata cgagtttaat caaacaatta gattgaagag
      481 ttagtgcaca gaagggctga agttcaactg aatgcaaagt aattatgttg aagcaaagtt
      541 gggcctgcct ctttggactg gaaaggagga agatgggaat atcactaaga aaacagtga
//
LOCUS       KCPA01002183             654 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 240108tic ultra-conserved element locus
            uce-1625, sequence.
ACCESSION   KCPA01002183
VERSION     KCPA01002183.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 654)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 654)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..654
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="240108tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>654
                     /note="ultra-conserved element locus uce-1625"
BASE COUNT          170 a          158 c          143 g          183 t
ORIGIN      
        1 caaacccctt ccctctgctc atttccatcg gagtgagatg ctgactttgc aagccattcg
       61 ctttatgaat atgaccctca aagggaagaa accctctcac aagcccagaa ctatgttatc
      121 atcgttatta aggagcttaa aaaggagctg ggaagaggag acaccggtgg aattgcagcc
      181 tgattgtgat tgatgtgttc ctattagctc ctcactgtta tctctctgga tggcaagaac
      241 agccagtggc ttgtaacaca acagattacc tgagttttca gccctagacg gatgtttaaa
      301 taaaatatag tcccttttag cgagaagctc attttctctc cgaggctccc agactatttc
      361 atgtcagctg tgattcgctg tgactgtcct cagtaaacat gtcttatcat taataattct
      421 ttacaagcac aatttcatgg agtctttttg tatgcgtgcg tggggggagg agggggcgtg
      481 catgcgcaaa tgctgctccc agcctcatct cgatacagtt tgggaaccca aggtgcttct
      541 cttcagaatt tcacctgcct tgccaaaaat gattgattac ccctagcaga ctgggtgtcc
      601 agctataccc aacaaatgac tttggcccct aacaacaggc cttggccaga taga
//
LOCUS       KCPA01002184             345 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 240213tic ultra-conserved element locus
            uce-1733, sequence.
ACCESSION   KCPA01002184
VERSION     KCPA01002184.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 345)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 345)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="240213tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>345
                     /note="ultra-conserved element locus uce-1733"
BASE COUNT          123 a           71 c           47 g          104 t
ORIGIN      
        1 aaataatata taaatatata catactgcaa atgtaataca gataacaaat tcatttaagc
       61 ccatttatgc acattagtga cacaccatgt ggcagaaaga ctaggactac aagaagaccc
      121 cgtggcgatt tattttatat taaatcccta atggcctctt ctcatctttg caaaaatatg
      181 cacaaaagtc cagactatgc agccattgaa atgaatggtt atttatttgc taaacgagaa
      241 ccctatgttt aatgttcctt agacataagg tagtctgcaa aagtcgcatt cctacagctc
      301 tatacatcat ttattttaca taccctaact tctcacaaca ggcat
//
LOCUS       KCPA01002185             595 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 240318tic ultra-conserved element locus
            uce-833, sequence.
ACCESSION   KCPA01002185
VERSION     KCPA01002185.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 595)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 595)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="240318tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>595
                     /note="ultra-conserved element locus uce-833"
BASE COUNT          203 a           92 c          123 g          177 t
ORIGIN      
        1 tttccattag cttaagtgaa tttataccca ttatagaaag gttgtagcaa aataaatatt
       61 attttagttt aattggatta aaaattagaa atgcaaattc tggtgcacca tgtctctgag
      121 tccttgtctc cctttttatg gtaataccct tctaatggtt taagcctatg aagaaaaaac
      181 actgaagatt ttaactagca gctttgcagg ggggcagaaa ggagcaaaga agatttagtg
      241 gtgaaaagag caaataaata ggtgctccaa gattaaaaag agggtagaag tgcatgctga
      301 gctgttgaaa gacctctctg tgtttaaaga aaaatattgt ttggttcttt caccagtgca
      361 tgatcaaaat aagaggtaca aattagttca tggctgctga agctacaaaa catcatgcag
      421 agagctgtct ttgggaacgt tttaatgagg agaagaggtc atcagactgt gacattgctt
      481 ttcagaattc ttcaagaaca acacagactt cctgttccaa atgtggtaaa gaataaaaca
      541 accttagtag taatcgtaca acttttgaac cgtgttcctt ggaaatactg taccg
//
LOCUS       KCPA01002186             633 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 240422tic ultra-conserved element locus
            uce-1267, sequence.
ACCESSION   KCPA01002186
VERSION     KCPA01002186.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 633)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 633)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="240422tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>633
                     /note="ultra-conserved element locus uce-1267"
BASE COUNT          209 a          122 c           97 g          205 t
ORIGIN      
        1 ggtggttaca gactcacata tccaatggac tttagctgct gtgataacct agtacagtac
       61 cattgtatct acatatttta aatgtgtaat ttatcagttg aaacataccc ttcaatacat
      121 gtgccataaa agaaaagagt gagggcaatt atgtaatagt atagtgtttg tctgacatgc
      181 cttaaatccc catattgtta ttcctcactg aataacaaat acaaaatccc tgttagcaat
      241 gttttccgtt ttaccagttt tatattagct gcctccttaa aaattgctaa tctagatact
      301 acattagtag gatgtcagtc aaactgcaat ccacagtgaa gccttcttca tataccaatt
      361 taaatcattc atggtccttt ctttggcatt attcaaaaga tcataataat tttcttgtgc
      421 ccacagcaca aaaaaatcaa ttatttcccc acaaagactt gaaagtactt agcgaatgct
      481 gtaagaaaag ctgagggtta tatcaaattg aaattgcact cattacacac aacacaatta
      541 gttgccacta gtctggccgg tgctttaatt ctgaatggca tatctttatt attacagaaa
      601 caagcatgca aatggcattg ttcaggattt gca
//
LOCUS       KCPA01002187             635 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 240531tic ultra-conserved element locus
            uce-1054, sequence.
ACCESSION   KCPA01002187
VERSION     KCPA01002187.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 635)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 635)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..635
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="240531tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>635
                     /note="ultra-conserved element locus uce-1054"
BASE COUNT          178 a          129 c          137 g          191 t
ORIGIN      
        1 ttttgtggct tttgccacat ttatttggag gtggaatctg ttttgttctg agtacagcta
       61 tgccaagatc aaacccttac ctgaacctct gtcttcaatc agctgaagca atttggggtt
      121 gatggcttga ttagcctctc gaagcacaga gatgaggtca tttacttgct taatattgtt
      181 aggagtaaag aatgtgtatg ctgtgcctgt tttggtactg cgggcagttc gtccaattcg
      241 gtggatatag tcctctgagg agttagggta gtcataattg atgacaaatt tcacatcttc
      301 cacatctgta aagtgttgca gtgtggcaaa aagcgaggta caaagttttg cacaccacaa
      361 cagccaaatc gaagataaac attagacaag agtattttaa agggaataat ggctgcaaag
      421 aacaatgtta gaatcatcca tttctgcagt attgtggaag agaaaagtta cgcattctca
      481 tcacccaccc tgtgatccaa aaccttacca tgtgtgcatt tgcttgtcat tcccaactca
      541 agtgtcccct ttacaaatca tcaagtgaca tctttgcagt agggccacta aagctcacag
      601 cagcctcttc atgtgctcat ttgaggacct tagag
//
LOCUS       KCPA01002188             644 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 240640tic ultra-conserved element locus
            uce-5416, sequence.
ACCESSION   KCPA01002188
VERSION     KCPA01002188.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 644)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 644)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..644
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="240640tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>644
                     /note="ultra-conserved element locus uce-5416"
BASE COUNT          200 a          109 c          128 g          207 t
ORIGIN      
        1 agaattcatg ctgcaagaga aactactaca gtatatcaac attttattca ctctttaaag
       61 catgaatatt taaacagaag acatttttcc ccaagcagaa gcctaaatag aagctcttat
      121 ctgaaatagt aaaagctgtt attttttttt tcaagaggtt ttagactgta tagttacata
      181 cacaggcatc tcaaatgaga gggcaccata catacatgta attggttgcc ttttcttttt
      241 cctcggcagt ctgtacaaaa cgtgaaaatg tgcctgtttc tgactagcca ttaaaaggca
      301 gtggttgcac catactgtga tttggggagc tgaagaaaat agccagaact gactgatatc
      361 tgataaacag taacaggagt cagtttattg caccaatcgt taaataatgg tgctgattat
      421 aaggctgcta actgcagatg ctgtaattgt ctgtcataaa tcttagtcat ttgtgacagg
      481 agcacaatga aagagagcat ctgcttgagg gcaaatgact tctgataaat atcagctctg
      541 ctaaaatgta cttggatgtg tctcaatatt ttggagagcc attcatgttg cttccacaaa
      601 tgtgaagtta ttattggttt gtattgattt tgccaccttg ggtt
//
LOCUS       KCPA01002189             664 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 240752tic ultra-conserved element locus
            uce-3854, sequence.
ACCESSION   KCPA01002189
VERSION     KCPA01002189.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 664)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 664)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..664
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="240752tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>664
                     /note="ultra-conserved element locus uce-3854"
BASE COUNT          229 a           97 c          126 g          212 t
ORIGIN      
        1 tcagttgtat tccaggcaag gaagatagta ttgaattagc attggagctg aacttcagca
       61 tagattgtta taggaataaa atatgaagta aaatatgtga cagaattaaa tccatcagtt
      121 ctaataaaag aaacagaaga aagcaaagaa atattggacc cttaaatccc attaaccagg
      181 ccagagagag aatgcgttaa aaggaagctg cactgtatct tttttcattg tttgatggaa
      241 taatcttttt caccctttaa gtagtgtgtt taaaactcct agtatttctg aaacaaagag
      301 aatatacagc cactgaattt ttataccttc ctttctgagt attgtccttc agtgcaatac
      361 agagccattt ctttgttctc acaagctagc agttaaattg tatgtaaatg tatgcaaatt
      421 agatgctgtc taataaagag agtcattaga tggaagaaat atttagttta gggggaaaaa
      481 agagaagaaa gcaggtgtat tttgcaatag aaaaatgtaa gattgcaaaa gcccctcaaa
      541 ctttgggtga aggcttttta taaagccatt aaaatatttt gccctactct ttttctgtgt
      601 ctatgtatgt gcacttctgt actggctgtg ctatatgtac agacacgtaa gtattgtatt
      661 cata
//
LOCUS       KCPA01002190             736 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 240863tic ultra-conserved element locus
            uce-6844, sequence.
ACCESSION   KCPA01002190
VERSION     KCPA01002190.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 736)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 736)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..736
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="240863tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>736
                     /note="ultra-conserved element locus uce-6844"
BASE COUNT          249 a          111 c          162 g          214 t
ORIGIN      
        1 cccctttctt ggagttccat cattttggaa ttgacaaaca agttaaaaag gctgccaaaa
       61 gaaagcagga gttggaggaa gttaattcac attgatgtgt gcatgccact gatagcaagt
      121 tatgcctatg acattctgac attgcctctc aaaaaagaga aagagtggag tggagtgaaa
      181 gactaagagg atgttcattt aattggaaat cctactgaga tctgagacag ctgaggcaaa
      241 ggatgcaccc tttttctgca caatggcatt ggctgaaggt tgtatataag gtggccttat
      301 taaagtgaca aggcaattta attcttttgt gcacaatgat tctacttcat tgatttacaa
      361 tgggaaggat ataattttgc tagtgttggc aaaaagctca aatgtcaggc ttttcaaatt
      421 gccatacttg ccttgttcag gatgaataat gaataagtca ccttttgtct acagttaaat
      481 attcttgaat aaatacaaag aacataaaag acataaatga ttgcctgatt tatatttaaa
      541 ataaagatca acattgtgat aaatggttga aaatgcttag tgtgaagtaa tatgactatg
      601 ctgataatta cattatcaat taaggggcag cccaggtgtg gagtgttata gaatggatgc
      661 cagagagaaa cccccagtgt ggaacatgcc aaacttgtct atctggaaaa cagggagtga
      721 agagagcctt agctat
//
LOCUS       KCPA01002191             522 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 240964tic ultra-conserved element locus
            uce-6213, sequence.
ACCESSION   KCPA01002191
VERSION     KCPA01002191.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 522)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 522)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="240964tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>522
                     /note="ultra-conserved element locus uce-6213"
BASE COUNT          110 a          132 c           90 g          190 t
ORIGIN      
        1 ctctacctgc tctcttaaaa gggaaagaaa cagtccttta taaagggata ctgcagcttt
       61 aattgcaaca gctaaaagag ttgaataaaa atgtaattat tttttaatca aaagtcaata
      121 ttaataacga ggatttttat tcccccttat ttttaccttt ctcttttttc tccccttttc
      181 tctctcactc ccccctctcc ccttttcttt ttttcctctc tcccttttct gctcgctttt
      241 cttgaactca ttcagacctg agcgctccta agaaatgccg agcgcgcttt ggccttgatc
      301 aacagaataa ctggtgcggc ccctgcaggt gtgtatagtt ttcccagact cgctatggct
      361 gatttgcagc tggtttattt ggtactttcc cctcctgcct tgttgctttg tagctctgtg
      421 ttgtgatcta gaagacacaa gggagtggga cactgccatc agtaatcatc tctccgaaag
      481 ggttttgctt ttttttgcct tcctctttgc tgctgctagc ca
//
LOCUS       KCPA01002192             630 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 241068tic ultra-conserved element locus
            uce-2504, sequence.
ACCESSION   KCPA01002192
VERSION     KCPA01002192.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 630)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 630)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..630
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="241068tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>630
                     /note="ultra-conserved element locus uce-2504"
BASE COUNT          233 a          120 c          100 g          177 t
ORIGIN      
        1 gaggacgaac cattactttt tctgcaagat gcctcctccc atatattaag cggaaaactt
       61 atgcagcatt ttaaaaacat acaactgtgt taagaagaaa aaataatcac aatctagact
      121 ctgcagctgc ccctttgact tatcaatttc agtaagcaca atttcaatca agtctagata
      181 aaatatacta atcctaaata gaccaagttt gtcacctacc acttcctata agctgcttac
      241 tatcctggag agagagtaga aacgctaaat taaatgccaa acagtagcag acagcgcttg
      301 tttggctgat taacttgtag acaagcatta caaataaatc tgagcatggt ctgcagcaaa
      361 ttaaattcca gtgcttttaa gaacaaagaa ttccttcgga aagaggatta gcaactttac
      421 acccaggaat gccagtttaa tttaattgtt ccacaatccg atatttaata tgcaaatatc
      481 attttgatat ataagagcaa atttgaaaaa gtgagaaaac aaacaagacg accgtctctc
      541 ttctgaactg taattataca aaataaagct ggccgaatta ctgggattgc attctattaa
      601 tgtgaatcag aacaagtcta attaaaggct
//
LOCUS       KCPA01002193             606 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 241178tic ultra-conserved element locus
            uce-4077, sequence.
ACCESSION   KCPA01002193
VERSION     KCPA01002193.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 606)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 606)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="241178tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>606
                     /note="ultra-conserved element locus uce-4077"
BASE COUNT          164 a          149 c          139 g          154 t
ORIGIN      
        1 ctcagctcct ccaccgcagg tccacaggcc tccctgggtc accgtctgcc cccacaggca
       61 ggtgaataag gaggtttctc cccagctgag gtggctcctc cgcttcccaa aagggtgtag
      121 cgagaaacaa gttaattttg ctcacaaaag cttcagtggc tcattacaga aatggaaaaa
      181 atattgctaa aaatgttttg caggggttgc cacagaaacg tgtagagcat ataatccaaa
      241 ataggatgtc tagacaaact cctactgtct gaccttttat gtatttccta atccagccaa
      301 tcttgccaag caaattggtg actaagcagc aattcccttt acatggtgtc gtaaaggcct
      361 gacaaggccc aggtcacggt tataaatttc agtctggcta cttcagcaat tctcagcttc
      421 ctttaccagc acggctcccg tgtggtttct gggctatgat gtgtgctctg gatcatcgtg
      481 aagtaatttt gtggctgtaa aatccaaaag ccacagctcc gctgcgaaac agagagcact
      541 ttcatcccgc aggaccccag agtttacata aaattgtaaa atagggaggc tggagagagt
      601 cttggg
//
LOCUS       KCPA01002194             671 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 241284tic ultra-conserved element locus
            uce-190, sequence.
ACCESSION   KCPA01002194
VERSION     KCPA01002194.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 671)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 671)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..671
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="241284tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>671
                     /note="ultra-conserved element locus uce-190"
BASE COUNT          218 a          137 c          125 g          191 t
ORIGIN      
        1 acacatactg tcctcaactt ctcaatcctt cctatgtgca gaaacacaac aaagggacag
       61 aacttgttac aaaaataact gcaaaatagc acaccacctg tgaggggcaa gttctagaat
      121 ttctagaatt ttgtcctttg aatctgtgga agtcagtaca tttttgctac ttagaagccc
      181 cgtgttattt gtaactgtca gtggaacgga aatctgtaat tgttaagagg gaaagagcct
      241 gtgcaaattc ttcccggtgc aaagtgaaca gtcaatcact tttataagga caggaacaac
      301 cgaaactatc cattcgtata ctttccttta gtcaacaata ttacctttag taatctgggg
      361 aatgtgcatc cataaattac agaaagtgtt attgcattgc tgaataaaca gcaacatttc
      421 catcagcagc agtggcagca ccacaaaggt ataacaaaca gactcaatca ttttcttgtc
      481 aagctttgca atgactgcag agtttactgc tggagataat gttgctttcc tcagcattgt
      541 gtgccaaact gcaaactgct tattaaaaca aaacctcttt ttctgagcag catgagttgg
      601 ataatcactt attgcactca agaaaaaaca ggtttgatgc ccagaggtgg ttagcaatca
      661 agcatatgca t
//
LOCUS       KCPA01002195             406 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 241390tic ultra-conserved element locus
            uce-7003, sequence.
ACCESSION   KCPA01002195
VERSION     KCPA01002195.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 406)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 406)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="241390tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>406
                     /note="ultra-conserved element locus uce-7003"
BASE COUNT          101 a          108 c           99 g           98 t
ORIGIN      
        1 attcaattac tccacaatga tggagcacgg tgtcccaggt cactcctgat taaacatgcc
       61 atccttctcg cagacattta gctcagaacc catttgtgtg cgactgccat ctgaagtggc
      121 tggctgatta cctgcaggat aatcccatcg agacgagcgg cgcgcgctgc agcaatcccc
      181 gtcgccttgc caacaaacgc atcagccaga tcaagagcaa gaagttccgc tgctcaggta
      241 attcatttat ccagcctctg ctgcgccctc cgctcagaag cgggtccaga gagcccgcta
      301 atcgaatctg cgggacagtg tttgctgtaa tggatattag ggagcatctt tggaaattga
      361 atttgggaaa ttcggttagt tcgacggaaa gccaattacc ttatgg
//
LOCUS       KCPA01002196             380 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 241491tic ultra-conserved element locus
            uce-2076, sequence.
ACCESSION   KCPA01002196
VERSION     KCPA01002196.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 380)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 380)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="241491tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>380
                     /note="ultra-conserved element locus uce-2076"
BASE COUNT          128 a           59 c           67 g          126 t
ORIGIN      
        1 agccttagaa gagttttttt gagacagtgt tgtggctgct tcttctgcaa ctcttcattt
       61 gtcctttaca aggttctgtg atttaagaat gtgtgttaaa tcttctgcaa caatcaattc
      121 aaatatacaa gtttggctat tcaaattact tttccaaaag tactttaaaa tgcattaagt
      181 tattaattgc ctgctggcac tttaatcaaa cgggaaaatt gacatagcca gaggcatgta
      241 tttttgtgga aaggaaattt atttaagaag aaacagcggc tcttactgct taatttaaac
      301 tgagaaaact gtggaaaatc aactgctatg gaaaattaat aaaacatttc cagctgcaaa
      361 cagtgactaa ttgtacaaga
//
LOCUS       KCPA01002197             516 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 241597tic ultra-conserved element locus
            uce-243, sequence.
ACCESSION   KCPA01002197
VERSION     KCPA01002197.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 516)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 516)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="241597tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>516
                     /note="ultra-conserved element locus uce-243"
BASE COUNT          157 a           93 c          107 g          159 t
ORIGIN      
        1 tcctcatcag cttttgtcag gagcagctag ggatcatcca tctgtcatta aagtgttaat
       61 tcgattcatt aacatagaaa atattcaaca tttcccactt tggaggagat gggctgtgcc
      121 gtccttttaa tagaactctg ctggaaatca aacacaattt ttattcaggg gaatgattac
      181 tgtgtcttgt ttaattcttg cctaacaaat gtcagcacta atgtattaca gattattcag
      241 tcaatttgat ggttccaggt gaaagaaagg aacacaaatc tcttctttta gtgtaaaaag
      301 ggtcagctgg atgacttcca ctgcaggagc cgagatgagg cttgacatga atcaatcaag
      361 caggctcaat tttacagtta tagtgcctaa tgcctaaaca tgagcgtatg ggtgaaaatt
      421 agcacccgat tatgagcata catgatcttc ccttggaaga caataatatt ggcattaagc
      481 ttctcaagag ggaagatgct gctggttttt aatatg
//
LOCUS       KCPA01002198             626 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 241705tic ultra-conserved element locus
            uce-3466, sequence.
ACCESSION   KCPA01002198
VERSION     KCPA01002198.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 626)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 626)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..626
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="241705tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>626
                     /note="ultra-conserved element locus uce-3466"
BASE COUNT          191 a          108 c          113 g          214 t
ORIGIN      
        1 agaaggtttc agttttaatg attgcaagtc caaatatttg acaagagcga agaccggagg
       61 tatatattct aaagtgaaag agggaggaga ataatgagtt tgaaaacaca ggctggttag
      121 tggaaaagaa tgctagaaag gtctctgtgt gaatcttcag ttcctggagt ttctgccaat
      181 tccttttatt actatttcaa gtaaccaggt acatatggca tgtttgtaag taaagcagtc
      241 aatgaagtta gttacacctc tgcatttatt accctacccc tgagtattat taacttttac
      301 attccccata aaatataatt tatcacttaa ataatttgct ttgtgtcagg gttcagtgtg
      361 ctccagtgct ttcctgctca ttaaatgaga tatttttact taatgagccc agaatgtcct
      421 ttgcatttaa cattagaatt gatttcaaac actccatttt tctaacatat ttgtatgtaa
      481 tttcagaatg tggacttcat tccacactct gaagagaact acaaagaata atgacccatg
      541 aattctggag acttataatc tgcctgcact ttgcattctt tcatctagtt tgaaagtctg
      601 agttactatt tgagcctgat gctgca
//
LOCUS       KCPA01002199             646 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 241816tic ultra-conserved element locus
            uce-7236, sequence.
ACCESSION   KCPA01002199
VERSION     KCPA01002199.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 646)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 646)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..646
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="241816tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>646
                     /note="ultra-conserved element locus uce-7236"
BASE COUNT          228 a          144 c          103 g          171 t
ORIGIN      
        1 aacagcaaga tgaaaagaca ttaataccac tgcaactaga ctgactgagg tgacccaaga
       61 taataaaatt caaatgcaag aagaaaaggc ccctatactg ataaagccaa cgctgtcaca
      121 cttttctatc tcttgataca tacagcaatg cagcaggcac ttctgataca tcagagctct
      181 ccaagattct tttccagtac atttacctct gccaagccct ccccttcccc caacacacaa
      241 aaatccatta ctaaagggtc taatctcagc tatcagcaca gagtgccttt tatggagcca
      301 ttaaaccatt tctcttgttt acagtgcctg aagaaagatg tgaattatgt ctgtgacaaa
      361 acaggcgata acatttctaa actgctatca aaatgcaaac tgaaatacac ttaaggacag
      421 ggaccctaat tcatgttttt gccattttcc tcataactta acagcactca cctgatgatt
      481 caaacaaatt atttatgctg taagtacaac aggtaggcaa aaaaaaaatc tgcttttaaa
      541 cagtttattg aacagttcat caaagagcgt aaaaagctag ttatgtctta ggtgacagta
      601 aggtgctctt atcagaaaaa atccaaggtt cacaagtcct gaagtg
//
LOCUS       KCPA01002200             481 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 241924tic ultra-conserved element locus
            uce-589, sequence.
ACCESSION   KCPA01002200
VERSION     KCPA01002200.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 481)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 481)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="241924tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>481
                     /note="ultra-conserved element locus uce-589"
BASE COUNT          145 a           93 c           86 g          157 t
ORIGIN      
        1 ttatgttgca gcaattacac tgtaaaagtg ctgcacaaga ttgattgctc tgatctgtag
       61 ttcaattgta aattagaata cacatccccc tggggacaca cggcccctat ttgtgattaa
      121 gaaaaaagcc ccataataga ctaatagcta aagttctctc tcttttactt tcaggcaatt
      181 agcttgatga aatggcctct ttttgtgtac cctggaagtg taaaccgata tcataatgaa
      241 gtatatgatg tttattctat tattttcacc ttgccatgta tgcaggaatg cataaataat
      301 ggctgctttg tctagtacat ttactgattc agaagtaaac tcggtcttaa agatgcagcg
      361 atcccatagc cttctgttaa gctggacaat gtgactagtc cttataaaaa ctcacattct
      421 gcccgaagaa gatttctagc caggtgatta aatactgttt gcaagacact ttcatttatg
      481 a
//
LOCUS       KCPA01002201             622 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 242036tic ultra-conserved element locus
            uce-1300, sequence.
ACCESSION   KCPA01002201
VERSION     KCPA01002201.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 622)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 622)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="242036tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>622
                     /note="ultra-conserved element locus uce-1300"
BASE COUNT          190 a          107 c          127 g          198 t
ORIGIN      
        1 tcctgggttg gtgaagtttg tggactgcta ggtagaaatc agaaataaac ttttcctata
       61 gcatttgaca gtaggtgagc ttgtatatag attctctgaa gttgccaaat ggggacagaa
      121 tttcttcaga gtggcctctg ctatggcatg tttgagttgc tgtgtgtctt gcaagttttg
      181 aagccttgca cttcagtttt gttagcccgt tggaagaaat ctcatttaac tggcattttt
      241 acatctacat taattctttt aaaacactga agtgagtgtt ctacagctat gtaaagaaac
      301 gcattatcaa agcattaaga tatgattaaa ctgacatttt cttaagaaaa cgaaaggagc
      361 aggaaaaagc cattctaaaa ggactgagtg ctacatactc cagatattat cttcagtgct
      421 tactcaggga tctttaaaga agcttattac caagtaccct aagaagacaa gtgtggatgt
      481 gtacagatca gaggaatgca agttaatgca cctgccagat tttactatcg tacaaagcat
      541 gtcaatcagc actcagacct tgcgtttaaa aatgtgttcc ttcagatttt tttcagtgct
      601 gtatcacaca tagctagaat tt
//
LOCUS       KCPA01002202             543 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 242146tic ultra-conserved element locus
            uce-7540, sequence.
ACCESSION   KCPA01002202
VERSION     KCPA01002202.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 543)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 543)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="242146tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>543
                     /note="ultra-conserved element locus uce-7540"
BASE COUNT          137 a          126 c          161 g          119 t
ORIGIN      
        1 acttgagcct gttgcagacc ttgcttggga gcaggcagag agtgtgagat tctctttccc
       61 atttcagcat cttgccctgc aggtttcgcc ggcggcgcag cagatgcagc ccacgcagac
      121 ggtacagcca ccacagccga ctggaggtcg ccggaggagg gtggtggacg aagacccaga
      181 tgagaggagg cggaaatttc tggaaaggaa ccgagccgct gccacgcgct gcagacagaa
      241 gaggaaggtc tgggtgatgt cactggaaaa gaaagcagaa gagctcaccc agacaaacat
      301 gcagcttcag gtgcgagcca ctgtctgtgc ccctgaagac acagaggggc tctttgtgct
      361 tgactgacgg tgcctttggg gctgcccccg cacagtcagc tcctagtggg agctatggca
      421 taatcagtct gttaatcaag atgtgtgtgc ttcaattaaa gaaataatta cattttagca
      481 ggataagcca aaaagctgtc ttgggattta gaagccttca ctagatggag ttgtatttat
      541 ttt
//
LOCUS       KCPA01002203             604 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 242259tic ultra-conserved element locus
            uce-7753, sequence.
ACCESSION   KCPA01002203
VERSION     KCPA01002203.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 604)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 604)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..604
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="242259tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>604
                     /note="ultra-conserved element locus uce-7753"
BASE COUNT          178 a          126 c          111 g          189 t
ORIGIN      
        1 agaaatcaaa caagtggctg agccaccccc aagtgtggct gcaaggctgc gatgaaatta
       61 gctccgtcta cagccagaaa atgatacata gtcagttaaa caatatttca tccactttta
      121 tcaaactgca ggacaggaat atctgttgta attatattaa tgaaatgtgt cactacactg
      181 gtgttagtcc atttcattaa tgcaaaagac ttttgttgta tgctttacat ttggaaacag
      241 atttaagtat taagtggcta atgtctgcag ccggggaatc ctttccgaat ttgtaacact
      301 gaccagaaca gaccgcatta cactctccaa atggtgcatt tttgcatttg aatgtctgaa
      361 ttatcctggt ttcttagaga cgaccacaac accaacatct taaatcctca aaatattgtc
      421 cgcttcattg aatgctcatg atctaagcat atgtgtaatt attctgtaat tctccccaaa
      481 atgtgattcc ttggaaatgc atactagatc tcccctattg tagctgcaat gactatttcc
      541 ctgcttcttt aagtacggtc acaaggaagt ctgtgtgcct tggtgcaccg catgtgtaat
      601 gatg
//
LOCUS       KCPA01002204             756 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 242372tic ultra-conserved element locus
            uce-3927, sequence.
ACCESSION   KCPA01002204
VERSION     KCPA01002204.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 756)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 756)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..756
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="242372tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>756
                     /note="ultra-conserved element locus uce-3927"
BASE COUNT          278 a          134 c          134 g          210 t
ORIGIN      
        1 aatgcagaga taattgatca catacatgtt ttgttaaatt agatgaccct tgtaacttta
       61 gctgtgctgc aagtctcagc aagctttttt aatccgactg agtcatgtac taggaaaaac
      121 aaaaggaaaa gagaaagtca tcaatccaaa attccgatac tcaagtctga gccactgcac
      181 attactagaa caaatggaga aagcagaaaa agtcttgctt tgtaacatta aatgtgattg
      241 aagactgtac agttcttctt acgcttttag acgttttgtc actttacctg gagaaatata
      301 cactgcttat tctgaattgc tgctgatgtc cagcacttgt caaaaccgct atctgtcaag
      361 cacttcacaa agtgttgcaa aatgacagat caggatgtct gaatagatgg agccccagga
      421 aaaacagaac agatagaaaa ttcatgactc taaactacat caaagcgact tctgtcaaca
      481 tcatgtcaaa agaaggaaaa aaagaactgt tcattttaga gggttttttt cattatataa
      541 acgctttttt cacgtatgag ctaagtgtaa ggaaaaatta acttggtgta cagtatgatc
      601 atttgaatgt gccaaaaata ctctttaaat aatccaggaa taaggaaact tctaacagta
      661 gatactgtct ggcagttaaa accaatgaca tccaaaagaa atgcatgaag aatctatcag
      721 cttaaaatag gacaaaccat ctggctccaa agaaat
//
LOCUS       KCPA01002205             781 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 242484tic ultra-conserved element locus
            uce-3687, sequence.
ACCESSION   KCPA01002205
VERSION     KCPA01002205.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 781)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 781)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..781
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="242484tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>781
                     /note="ultra-conserved element locus uce-3687"
BASE COUNT          239 a          145 c          154 g          243 t
ORIGIN      
        1 tcctttatat tacatgtttt cccacacggc agtgtttcta ttgccgctgc tatggaaaaa
       61 cttgaaaaaa tataaataaa atatgctcaa gcatgcaagt caatgatctg tgtgttaaac
      121 ctattggcac atacaggaca attttattgc atgacctact ggttaaaaac atcaaaaata
      181 taagtcaagt catttgaaga actgctgttt agtgagttag aatgaatgaa gtctttattg
      241 agtacacact tccagattca tcactggttc tgttctagtc atgccctatc ctagtcctgc
      301 cccaggcagt ctttttgagg ccacttgacc tgccagtcat atttcagaaa ctactgatac
      361 ggttcctgat ttagtttaga ttccaaacgg gctagctgct ggattacaga ctaatgaccc
      421 atcagatgct aaaggcaaag gcttaaagtg ctctagtgaa ttaagcctca acattgtctg
      481 aagggaagaa tttattatgt cattaaattt gattcaataa gtttcatttc tttagatgca
      541 ttgcactaag caagaagtca ggaattagtg ggagggattc tcttcaggta tattcaagta
      601 gagcagcaag ggatgccatt tcatagaaat ttggctgtat tgctaaaaac aataggttga
      661 gaaaactctt catagctgat taactaaccg tggactcctc agactgtgtt cacttgaata
      721 tatgcttcac ttggtaaata cacagcaaag tggggcttgc ctgatttgat gagacccttg
      781 g
//
LOCUS       KCPA01002206             532 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 242596tic ultra-conserved element locus
            uce-5992, sequence.
ACCESSION   KCPA01002206
VERSION     KCPA01002206.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 532)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 532)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="242596tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>532
                     /note="ultra-conserved element locus uce-5992"
BASE COUNT          154 a          123 c           92 g          163 t
ORIGIN      
        1 cttgttcagc ccttgcagtc ttggtctctt tagcacagat ctcctcacaa aggcaatcct
       61 tgtaccagaa agcctcagat ttgccctcag ctcttccaca ggcattgatt aggggtcctt
      121 tttccttaaa aatcaaaaaa gaaaagggac atgatttaaa actaaaatag aatgaagtgc
      181 attgtacaaa ggattatttc aagtaattct ccttgaaact gtaacaaagg aatgtttcct
      241 ggggattaaa tggactgtca ggtaatcaga aaagttgttt taggttttcc tcaagaagaa
      301 aattttggat ggattttgtt tctggtgctt tgtgacactt tacagcttat tccctcatgt
      361 cacaccagtt tatttcatta ttcataaaca tgctgaatgc caaaatgatc gcagaagcta
      421 tggggatctt acacactcag ccactaagcc ctccccatcc cattgttaat gcaagaaccc
      481 agccccctcg atgcccttcc acagtgattt tcttctaacc actgctcatc ct
//
LOCUS       KCPA01002207             635 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 242703tic ultra-conserved element locus
            uce-1047, sequence.
ACCESSION   KCPA01002207
VERSION     KCPA01002207.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 635)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 635)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..635
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="242703tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>635
                     /note="ultra-conserved element locus uce-1047"
BASE COUNT          181 a          134 c          131 g          189 t
ORIGIN      
        1 gtgttcatgc aggagaagca gcaagacaaa tattttcaca cattttcaga tagctgagtg
       61 aaactggctc caccagaatt tacagttgaa gactaccaga atttacaact tgtgaaattg
      121 tggctgtctg tattttctca ttacagtgtg cttgctagag atagagaagg tgcttttttt
      181 tgccatctac tgtcgcactg cttcctagtt aaaccttgtc tcaagttatc aacactctct
      241 ggagagataa gcttcttctc acttacaacc tgtcactaat aatcgaactt tcaagactcc
      301 atctcgaaaa gagactaccg gaggcacaca ggtcacagga attaactgcc accagtcctt
      361 gcagaaaact aagctcatca atctatagct tctcgtcata attagaataa cggcttcgaa
      421 aatttgggct gatgttgact cggtcttatg ccacaaagac cactgattaa aatcttggtg
      481 tgaaacttaa tgttaagtgc tggtggcgtt gtcgtggaga cagggacaaa caattccctt
      541 gccgtgacat tttcaatgtc ctgcagaaga aaaactgtcc tctttagtgt ggcactgtat
      601 gaagcttatt tatggctaca gggcttgctg gattg
//
LOCUS       KCPA01002208             717 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 242815tic ultra-conserved element locus
            uce-6496, sequence.
ACCESSION   KCPA01002208
VERSION     KCPA01002208.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 717)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 717)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..717
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="242815tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>717
                     /note="ultra-conserved element locus uce-6496"
BASE COUNT          201 a          138 c          171 g          207 t
ORIGIN      
        1 aatgaagaca tttttaagca gcaaggcttg caagtcatcg tcttgaaatg cttagatcag
       61 gtggcactct ctgttagaaa agtaagctct gtaatgatat cgattgcttc caaggccaca
      121 ttagagatga agacaagtcc caggagagag gttgttgtca ccttgacctt gggtcagagc
      181 tggaccactg acccctgaca cccaggactt ctgcactgca tcgtgatatc tttcatgcct
      241 acagacaaag tcagcagggg acatgtgtcg atgtggccct tgccaaatca gaattgactg
      301 gcctgtagga agctggagag cagcgggaaa tgtgggttaa agtatgtcaa taatgtttca
      361 caagaacaat ttctcccaag aattgtagct gttggaatgt tttgacattt attcggtaga
      421 gaaatgtagc atgttttgtg aagcacttca agagagctgc tgctaactgc cgtggtgtat
      481 tgatcttcct gttaaattgc atgggcacac ttgggagatc attgagattc aggcaacagg
      541 acagaaagga tcggctgcac ccgatggtca ctaatggtaa ttggtttcga tccttgcact
      601 tgaagaagct gtgatttact tggtacacag atgaattgtg gacactaaat attttgaaaa
      661 gaaaatatac tgtgatttct ttttctcatg tcatttacaa attattgcct ccccttc
//
LOCUS       KCPA01002209             386 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 242915tic ultra-conserved element locus
            uce-2064, sequence.
ACCESSION   KCPA01002209
VERSION     KCPA01002209.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 386)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 386)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="242915tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>386
                     /note="ultra-conserved element locus uce-2064"
BASE COUNT          121 a           60 c           81 g          124 t
ORIGIN      
        1 cttaggactg atcaacacgc ccatttagga gaggcatctg ttaatggccc tgtatgatat
       61 gtgatttcta ctaccttggc tgaagagaaa gaactgatgt ccaggtgttt gagtttgagg
      121 atatcatcta gaccctgttg aagccagtca ctgctgcact aatttcgcaa ggaatcagga
      181 ccagcaacat ttatattcta gattttaaga cattgtacag aaattcataa gtgtaaaaat
      241 attgcacatt gagaaatacc aataattttt gcgtatgttt atattgtatt gttctaaata
      301 atggggggcc tgtgaaataa gatcttgcta cccatgtaat gatgacagta gtgttactat
      361 agttaaaatg gctgtaagaa tagttt
//
LOCUS       KCPA01002210             690 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 243024tic ultra-conserved element locus
            uce-3516, sequence.
ACCESSION   KCPA01002210
VERSION     KCPA01002210.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 690)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 690)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..690
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="243024tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>690
                     /note="ultra-conserved element locus uce-3516"
BASE COUNT          209 a          123 c          127 g          231 t
ORIGIN      
        1 tcatacatgg tgaatgttgt ccatacattc tggcacatct ttcattatct acaagtgtaa
       61 acctggcaca gttgcaagtc aagatcatat gattgtgcaa attcaaattg attccgcatt
      121 ctgcacagag gagccaggcc ttgccagaag taatataaag taaaggtctt tggggtacca
      181 gtttaggttt gggtttggca ccaaaaagac cagagaagtg ggtagtaaaa atgaacagta
      241 acttgagtat attttaataa caactgctct gttttctttc ttagtgcact tttattttat
      301 ttgcactttt gtagtttcat cttgatgaca tagctattat tttatagcag tttcaagcag
      361 ttaattaatg aattgcacac atgtgacatg acaccacctt gcctgataat ctctggcatc
      421 tatttttgtt gctttgtgaa ttgttttaga tcgtaaattg gcactggaaa ctgttatttt
      481 aatactcaaa acactacaat agtaatacta gatggatgac atgcattaat gacaaattgc
      541 catacatgag ctcatgatat ccccagacag tcttggagat attagttaat gcttctctgt
      601 tctttagatg taaacccctc tgttgttaaa tccacaacac cttacgaaga ccgattgcca
      661 tgttgctgac aacattagga agagaatgta
//
LOCUS       KCPA01002211             542 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 243123tic ultra-conserved element locus
            uce-1996, sequence.
ACCESSION   KCPA01002211
VERSION     KCPA01002211.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 542)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 542)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="243123tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>542
                     /note="ultra-conserved element locus uce-1996"
BASE COUNT          170 a           85 c          124 g          163 t
ORIGIN      
        1 gaacaattca aaatatgtaa ctaatatcgg gtagttaaac tgatgtagca tgcatgttgt
       61 tttgcaagct aacaggttaa atatggcttt gctttaagat tcccatcaaa tttcattttt
      121 atagagaaat ttctgaaagc agaagggggt tgagggaggg tgaggtaaaa agaaataaat
      181 cattgtagtc tcaggaacag taatccttgt tgaggatttt ggctgattga tataaataac
      241 atcgtccccg ccatctgtcc gaagagggac ctttccagtt agtgttaagc tgcaacggca
      301 gaataattaa tgaatggtgt cctttgtgct ggtaataaag acaagacaaa ttatgttata
      361 atccaactgc tgctcatttg tcacagccaa ataaaatgtc aaataaaagt gaggggggca
      421 ctgtgtttgt ttaatggact gcaagctacc tgttcgtatt gttgacagac aactacagtg
      481 caagttgtga atgtggaagg cggcaaaacg ccgtgtgtcg aacagcaatt ctcctttttt
      541 tt
//
LOCUS       KCPA01002212             680 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 243233tic ultra-conserved element locus
            uce-6598, sequence.
ACCESSION   KCPA01002212
VERSION     KCPA01002212.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 680)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 680)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..680
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="243233tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>680
                     /note="ultra-conserved element locus uce-6598"
BASE COUNT          187 a          153 c          137 g          203 t
ORIGIN      
        1 attccttccc caatcggatc agctttgaaa tgctcctcaa agtgaattct cccctaacaa
       61 tggcttgacg caaaagcctt ttttctctct taagaagaga aggctgcaca tggtctgcta
      121 ccatagcagc gtgaatagtt cttatttaat ggaaaataaa agatacttta cattaattca
      181 gtgggggatg gaaagctggg cacatgcgta ccttgtgctt caaacatgga ggagcatcat
      241 accttgacct cccctctcct ggtcccatga ttattaccca gcttgcatta gaactgtaat
      301 gggaagtgac aagtttatgt aaatgatcca cacaaggatt ttgctcttgt aaaacagagc
      361 agttactctg ggctttctaa ttatttcatg ccttgtggtt ctgtgatggg gcagagatga
      421 ctattacttg aaaagtatat tgtgattgac aagccactgt ccccctggaa ctcattaagg
      481 cctgtgcttc gcgagagcgg gtaaaaaagc cctaccaggc accccagtgc cggctgttcc
      541 ttcagatcat ttgttgggat ttttgcactg atagagaaaa gcacaatctg catgtatctc
      601 aaacaagtac cacctcctgg ctacaaattg accaattatc ctctgctttc actttttcat
      661 tttaaatctg taagattagc
//
LOCUS       KCPA01002213             741 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 243345tic ultra-conserved element locus
            uce-6906, sequence.
ACCESSION   KCPA01002213
VERSION     KCPA01002213.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 741)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 741)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..741
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="243345tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>741
                     /note="ultra-conserved element locus uce-6906"
BASE COUNT          192 a          158 c          158 g          233 t
ORIGIN      
        1 agaaataact aactgaagtg catggaaccc ctgtcagcag aaaaatatta tttccttctc
       61 ctgagtgttt agtataacaa tataagcatt gaccgttgtg tactttggta ttattttcct
      121 ttcctgctta tagtcccttc tcatgtttct ccatcatttt aggcccctaa tagggatagg
      181 atgaacccat tgatgtcggc acatggaggc ctgctagtgg catgcctttg gttttagtct
      241 cctagcagca gccattcatg ttatatgggc tttctttttt gggcattgcc cacccctgaa
      301 tctgacttca ggcatttttc actgcctgtt ctgcatgaat agccacaggc ctcttgccaa
      361 ttgtcccccc tccttgaaag ccagcctcag ccaaaggcct tttcaagtgt gatcccagag
      421 tgccacacag gctttcaggg tattgttgtc gagatgaggg ccctgcactg gaaagtgggg
      481 tcagaagaga aagcacaata aggggtgatg gaggcttcat gcagtcctca gatgctggcc
      541 tgtttattaa tttacaaaac taatgtcact gtctttagag gagagattga gtgaaaaaga
      601 tgtcctttga agagaagaac tgcttttgat gcattaccaa aacactgctt tattaaattg
      661 attttaagta cggctagtaa atgttcagaa acaccaataa aatattgaag gtctggattc
      721 agtgttttct ttttcctcat c
//
LOCUS       KCPA01002214             767 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 243458tic ultra-conserved element locus
            uce-7642, sequence.
ACCESSION   KCPA01002214
VERSION     KCPA01002214.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 767)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 767)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..767
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="243458tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>767
                     /note="ultra-conserved element locus uce-7642"
BASE COUNT          189 a          194 c          148 g          236 t
ORIGIN      
        1 cacctgtgtc gcacgggggg caggttagga gagaagaatg gctccttgaa agccacctct
       61 ggcatgacta ttacaagaga caatgaactc gaacatgctt ctcttttttt cctccaaaga
      121 tcatgaactc gaaactcagt tgtgcatgca tgaaagttct ataaacatta cttaaacagc
      181 agccaaaaga cctttgccag ctctggccta cttctcccct tgtaggggct cagcactccc
      241 actcagttga ctacttgtcc tactctttgc cctctctgct ctgctgcaat cgtcctggaa
      301 ttttcctcta tgcaactgct gtccaaacca gctgcaccca ctacatcttc agcagtggac
      361 cgaggagggt attaatcata tttttgagga ggacactctg ctatttatct ccctgacacc
      421 tccagcgttt gggagcccac tgcagcacac agcccattga ctagtaatat tacacattac
      481 cgtgctccat tgcctctccc tgccctcttc attgagtggc tgttcaacag tggagttgtg
      541 tttgttcaat cagacataat ttataccttt tttgttcctt ctggagagct cttgctaatt
      601 ttaagtctaa gcactgtgtt ttccatataa ttctagctac aacgtcctga agatggtcag
      661 agatatgact tgctcaaact tgttggtttc aaatcaccat caagggagat catctcatac
      721 ttgctttaaa gatccaggtt ttattgcatg tgtaggaata tgtatgt
//
LOCUS       KCPA01002215             812 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 243570tic ultra-conserved element locus
            uce-1933, sequence.
ACCESSION   KCPA01002215
VERSION     KCPA01002215.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 812)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 812)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..812
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="243570tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>812
                     /note="ultra-conserved element locus uce-1933"
BASE COUNT          225 a          152 c          178 g          257 t
ORIGIN      
        1 taatccagta gatgatgtta taagtaagat gaatatttat ctcctgttgc aacatattcc
       61 ttgtgtaatt gacaaaatag gtagtgaatc cttcagacca gtttggtttg ctctttttgt
      121 atcgaggtaa tgttgcattt atagttaatt tccttttaaa ctgttttaca ggataatttc
      181 agaatatatt aacaaataga aagggcatga cagaaagaaa agaaagcagc atgataaacg
      241 ttgtgacctt ctagtgagaa acagtatggc atgcataaag gactgctgca ttaaatggac
      301 aaggggggag aaggaagtgg gtaattattt gtagcagtgc ttttactgtt gttggaatga
      361 gacagactaa cagtggcagc agtcattttg ctgaatcaaa gtccatgtta gtcgcattat
      421 acactgccac aaaaggttgt taaggctggt attagcatgt accactgagg acattggaag
      481 gactcgatct gtcacactaa atcgccttct tgccctcaac cattgaagtc tccagctcct
      541 ctgacatgtt ctttcattaa tggcctggcc ttgacaactg atcctaattg cctctgaacc
      601 gcacttcatg tattattggt gtctgcctgc cctggttctt gtcaacaagc cgcagcatgc
      661 acagggtgtg cccggtgcct tttgctgaaa tgatgctcac atagtcgttt acctctgagg
      721 gtttgggtct cgctgggaat gaagtataaa gctaaagatc ttcctgtctc ttcttagcaa
      781 tactttaatg tgcatctgtg ctatgtactt at
//
LOCUS       KCPA01002216             661 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 243683tic ultra-conserved element locus
            uce-3196, sequence.
ACCESSION   KCPA01002216
VERSION     KCPA01002216.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 661)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 661)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..661
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="243683tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>661
                     /note="ultra-conserved element locus uce-3196"
BASE COUNT          215 a          150 c          151 g          145 t
ORIGIN      
        1 ccttaacacc ccaccccatc agtgctgctc ccccagcaca aattgccaca catctgtaca
       61 aaggacaggc ggaagaataa ggtgacagtt ctttaaggaa aaaataaaaa tgcaaattaa
      121 caaacaccaa atttgctgta aacattaaat acttcagaca tgaaaccttc tgtgctacaa
      181 gagtgctttc agcattatct attcacagca gttcctctgc tcctgagggt cataaacact
      241 gagagatgga gccagcaaaa aagctctagt tgaaattcag ctcacagcaa aagcaatttc
      301 cgagtgtgca aagtgctgtc agcaggcctg atgtttgtgt atgaaatata gacaatatga
      361 ctggcccatc ggcagtcact gtcagcctga tggatggggc ctgagaagaa gtaaagcggc
      421 tgccgttagg gcccagtcta tcagatgctt gatggagatt cgggggctta atagaggtaa
      481 aagttccttc taatcggatt tccagcggtg atcacaaaga aaataaaagg gatagcgatg
      541 tgatacgagg gcacaagcaa ggcttccccc agtacaaagc agaagaggag agagatgcat
      601 tctcaatatt cgtccttgga ctcaagtgtc ccagaacaga caggacagcc ctacagctca
      661 c
//
LOCUS       KCPA01002217             524 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 243792tic ultra-conserved element locus
            uce-4975, sequence.
ACCESSION   KCPA01002217
VERSION     KCPA01002217.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 524)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 524)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="243792tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>524
                     /note="ultra-conserved element locus uce-4975"
BASE COUNT          186 a          102 c          105 g          131 t
ORIGIN      
        1 ttctctgccc ctacatatat tacaaaaagc ttcaggtgct tgcaggtact tcagacaaag
       61 caaaatatag ctcaagtcat gtgccaaatt ttaaaattta cttttatcta gctggagtca
      121 ggtgttttgt cataacaaac ggaaacaaag gcttttttta ttgctcaaga tattcaatgg
      181 cttttgtgtt cctagcgtca gcaagaacgt cagaggattg tatccaagga gctaaatgtg
      241 caagacctag ggtcaaagca gctgaataca ccaacctcag aaaacacaga caatgaattg
      301 caaatgacac tcaaaacaaa acggggaaaa aaaccttcac acagaaaact acaaaagaac
      361 tccacagata ctgaattggc tttctgtaca cactgatcct gcttaactgt gtgtggtaac
      421 taaccaaacc ttctgagact aatagtcata aaatagagac tcaggggtgg gggaaagata
      481 atgggatggg ggagaactgt aaggaaaaga ttgcattact cctc
//
LOCUS       KCPA01002218             350 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 243889tic ultra-conserved element locus
            uce-4474, sequence.
ACCESSION   KCPA01002218
VERSION     KCPA01002218.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 350)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 350)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="243889tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>350
                     /note="ultra-conserved element locus uce-4474"
BASE COUNT          111 a           62 c           53 g          124 t
ORIGIN      
        1 aagaaccaac agatgttatg aaagatgcca attaagcaaa attaacacta attatctaga
       61 ttgaccatga gtactaagaa catgcacttt ctgtcatgat ttcaattaaa gcattgtagc
      121 ttgtggtttt aaattttagt aaatgcttgt gctgattttt ttcttggtgg cctgcccccc
      181 atgaatgcaa aagccttttt tgcaatttac tcttaaccta tccactgtgt gttagacaac
      241 tctattaatt attatggact gttattgcag ctttcctgac cttcacattg ggtcctatct
      301 atgctgatct aaatgcattg ttttaatgat ttccaaaaaa aaaaaaaaaa
//
LOCUS       KCPA01002219             533 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 243995tic ultra-conserved element locus
            uce-1059, sequence.
ACCESSION   KCPA01002219
VERSION     KCPA01002219.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 533)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 533)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..533
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="243995tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>533
                     /note="ultra-conserved element locus uce-1059"
BASE COUNT          140 a          143 c          111 g          139 t
ORIGIN      
        1 aacaaaaaga aaatatattc ttttgaccca accagcccct aacacagcct cggcatcaat
       61 tcttaatatc tattatttat gtctgaccaa aagcaactgc tgcatttcca gtggccacca
      121 tgaaggacgt atttatgtcc cccacgaaag gctcataagc gccgtgagca cacctgggta
      181 gttctgaagt gtgctagctg cacggcgtgt cgtggtgtgc tctgattgcc ttatcttctc
      241 atttatcaca gatgagttgg aaccagcctt gctgaaaccc acttgcattg tcctgacaag
      301 actgcaagat cctcgtttct gcttcgctct tgcggggctg ccacacaccc ccggtaccgt
      361 ggagggcaac agtcgtgaaa tagaatcagc cttcggcaca acctgctcct tgccaccacc
      421 taaaactgct cagtgtagct ggttaataag gtcagatgaa gggagaaata aaattgatcc
      481 gtggcaatgc tctcaacaag atctttccct cgccgttctt agatttcaaa tca
//
LOCUS       KCPA01002220             550 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 244101tic ultra-conserved element locus
            uce-442, sequence.
ACCESSION   KCPA01002220
VERSION     KCPA01002220.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 550)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 550)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="244101tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>550
                     /note="ultra-conserved element locus uce-442"
BASE COUNT          198 a           82 c          103 g          167 t
ORIGIN      
        1 ctctttaatc acaggatgag cttttaaaag gaaaacaacc cagtccagca ggttctcgct
       61 atggtatttt gtgggagata attcaattat tgtagaaaat tattttaaac attaagatgc
      121 acaaagttca gtttcccctg tttctgggac tatcacccaa gctattgata agatgtctaa
      181 atttattgca gaataattct gcaggaaaag agataaaagg ttcctgaata aaatatgagg
      241 cgagagctgt aaattgtagc aatgcatatc atttcattca aatgtaggaa gcaattacca
      301 tctgctatac tcatcagttc cctcctttat gacttaatta tatgtttaat gctatcagat
      361 caaggaaagg gcacaataga tgaatgagtg aaagaaacag aaaagattca gcaacaagac
      421 aaaaggcaga tgaaaagtaa cccaagaaca gaattgattt catttgttgg gagaggagtt
      481 aatttaaata gtatattcta tcatctcctg tgctgtactg agataatata aatcatgtgt
      541 ttgtgaattt
//
LOCUS       KCPA01002221             333 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 244198tic ultra-conserved element locus
            uce-3121, sequence.
ACCESSION   KCPA01002221
VERSION     KCPA01002221.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 333)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 333)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="244198tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>333
                     /note="ultra-conserved element locus uce-3121"
BASE COUNT          104 a           77 c           42 g          110 t
ORIGIN      
        1 aagtttgtta caaaacaaag ttggtctccc aaaagcagac tctccctctt ctactttcag
       61 aacaaagttt tagaagttct taccatcaca tttttgtgtt acttcattaa acttgtgtcc
      121 agctgggcat ttgcactcaa aagatccaac agtattaatg caatttcccc cttgacagat
      181 cccagggatg gcttggcatt catccacatc tatgatataa aaaacaccca cttttatttc
      241 atttctcaag aagagtcata ataatttgtc tacacagaaa ttaaatatgc ctaaatctgt
      301 tcttcaccca tcctaatatt acgatacttg ctt
//
LOCUS       KCPA01002222             570 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 244306tic ultra-conserved element locus
            uce-2489, sequence.
ACCESSION   KCPA01002222
VERSION     KCPA01002222.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 570)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 570)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="244306tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>570
                     /note="ultra-conserved element locus uce-2489"
BASE COUNT          172 a          121 c          110 g          167 t
ORIGIN      
        1 aaagatattc tactcaaaaa tcttactcag ttgttaatta attattcaag aataaagtta
       61 aagaagaaat tattagcatt ttcattatac ttcaggaggt gagttgtagc tttttgtaac
      121 ctgttgccct gtcaggcctt attattttca caaagatctg acaatcgtgg ggtcatattt
      181 gttggctgct tgtgacaaca ttcaaaaggg gcactatata tcactgaaac agctcacaaa
      241 ctggctagtc acattattta ttatgagcca cacatgtgac aaactattta actcagtgac
      301 tcctaataag tcaaagagca agcaattagc taacgcagta tgagggctgt tcgtggcaat
      361 ttatagatgc tctcaagctg tcacagcact tcaaagtgcc attcccctta acgactcact
      421 tgatatgaca agcaatacac agcacgcatg gcagcgatga aattggcagc cgattctgtt
      481 acttgaagct tcctccccaa cagctgttta catgtttgca gacttctctc ctgcgctgga
      541 aacgtggggc actgtgctcc aacagaggga
//
LOCUS       KCPA01002223             456 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 244415tic ultra-conserved element locus
            uce-6077, sequence.
ACCESSION   KCPA01002223
VERSION     KCPA01002223.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 456)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 456)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="244415tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>456
                     /note="ultra-conserved element locus uce-6077"
BASE COUNT          168 a           92 c           69 g          127 t
ORIGIN      
        1 aaatcatgac aagtgaaaca acttgctttg gttgagaaat cacttagcct gtcatcattt
       61 tacagaacca aaaacagtgc cggccataat ctgctgcctt tcaagtcgaa aaaatacatt
      121 acttatgcag agaatgtttc taatgtaaca aagagaagga ataaaaatgc cttacaacag
      181 ttttattaaa aacaaattcc cacagtaaat acatatacac tctagtacca tggtgaaaca
      241 gccaaagaca tcactgttaa gtgctatggg aagtacttat aaattacttg aaataaaaaa
      301 cattgttgcc tggacatcag ggttgaaatg ctgcagtttg taataaatta acacagaact
      361 tcacttcccc tcctctaaca aagcagccat ttgtctgaat aacccacatt cagctgtgag
      421 ttatattttc acaactgcaa ctgcattcat ttgcaa
//
LOCUS       KCPA01002224             527 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 244527tic ultra-conserved element locus
            uce-3812, sequence.
ACCESSION   KCPA01002224
VERSION     KCPA01002224.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 527)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 527)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="244527tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>527
                     /note="ultra-conserved element locus uce-3812"
BASE COUNT          140 a          102 c          139 g          146 t
ORIGIN      
        1 ttttggggag agcctccccc ccctccctct ggggatgggt tgatgtcgca ggcattacct
       61 catgttccac gccacgcagt gagtcaaact ctgctaagta actaaataaa gatgtaattt
      121 taatgatgat taaattgaag cacctcatta atttcatgtg agaggtgggg aagtacacgg
      181 cagctctttc cctaaatcca ttgtttgtct ggccgcgaga cgtcccctct caacgtctgg
      241 ttgagtctaa tttaagtatg taaatttaat ggttcagtaa gtaaaattgc ctttattgtt
      301 tggaatggtt tgcacagtaa tttacgagct accaaggctc atttgatagg agtgtatgat
      361 ggagtaggtg actacagtga aggacatgtt tatcttaagg atacaggaga agaacacaga
      421 tatggaacat ctgtaatcga ggaccttggg ataactgtgc tgctggagac ggccctggga
      481 caaagcagcc ctgagggctg tcctgggcca ggcatggaat gggatgg
//
LOCUS       KCPA01002225             612 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 244636tic ultra-conserved element locus
            uce-4719, sequence.
ACCESSION   KCPA01002225
VERSION     KCPA01002225.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 612)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 612)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="244636tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>612
                     /note="ultra-conserved element locus uce-4719"
BASE COUNT          197 a          104 c          112 g          199 t
ORIGIN      
        1 attagcttgc actcaggaca agcttttcat ctgccctcat ctgcaaagcc aagttattat
       61 aatggaagcc accaacaggt taaggaggga aggaatttaa aagttcatga gaaatgtatg
      121 ttaaaaatct gtttaagaca atatgaaaaa ctgctcacgt acatacaaat aggtgaaaat
      181 tctttttcag ctttatttac ctgagaatga atttcagttt gaagaggcct ttatgtcgtt
      241 tcaggcaaag cacctaagat ataagcaatt ttcaacaaga gtactacaca tttgtcttta
      301 taacaatttg tatgtaacag cttttatgca aatgatgcta aagtggcacc ttttttctaa
      361 attggacatt tttatggtta taattttctt ctgtaataac agcaaaaaaa tggttgtccc
      421 agtggagttg agcatttcat ctctagtgct gttttgtgaa gttggaatga caagtttctt
      481 tcatttgcac aaagaatgac aaaaagaagt attttttgtc attcttgtct gacttggttg
      541 aggcagttac acttggaagc agcaccagtc ccctgacacc aacctctgcc atcaagaatg
      601 gtatcataaa gt
//
LOCUS       KCPA01002226             623 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 244745tic ultra-conserved element locus
            uce-6398, sequence.
ACCESSION   KCPA01002226
VERSION     KCPA01002226.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 623)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 623)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..623
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="244745tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>623
                     /note="ultra-conserved element locus uce-6398"
BASE COUNT          191 a          112 c          115 g          205 t
ORIGIN      
        1 ggaatcccct tatgtctgaa gctgtccctt ttaacacaca ccagactaat tatttaaaag
       61 ttcctgtaaa attagaagac atagcccagt cctttaatta gaatacactg tgaataggga
      121 tagcatatgg aggggaatgt caagaagagg gtgccagggg cagatcctag gaaatctgta
      181 ttcatttctg cctcctattt gttcagtaat ctctaccatc ataactaaat cttggagcac
      241 tgatgtagtt cgagttgttg ttgactcaac gtcaaaattc aatcactggg ggttttgcat
      301 cagccgggcc acttatttgt ctaataaatc cgtcattttg taagaaaaat atttgagcag
      361 ccgtacttga cctcttggta tccacaagcc acatttattt ctaccagttt acaaatgcaa
      421 aatggagatg atcatcttaa tgcctcgagg tactgtgttg atttctgatt ggattttaga
      481 tggaaatgtc tattttaaat accccgtgat taaattgtac atataataga attcatgcct
      541 cttcaaatca aatcgcaatt tgagaacccc gaatttattt taaaggaaat attatttaag
      601 atggtttctt aaatgatttg tga
//
LOCUS       KCPA01002227             618 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 244853tic ultra-conserved element locus
            uce-7697, sequence.
ACCESSION   KCPA01002227
VERSION     KCPA01002227.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 618)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 618)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..618
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="244853tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>618
                     /note="ultra-conserved element locus uce-7697"
BASE COUNT          163 a          151 c          163 g          141 t
ORIGIN      
        1 gggcgttccc tcttgtgcca tggaagtggt cagtcagtct gaggacttcc aaaaggcatc
       61 attctgtgat cactgacacc catccagaac taggagattc ctgaagctca ccctatggcc
      121 ctcatcatcc ctgctaccag caaaggtggt gggaaaggca gcattcaaga gacactgaca
      181 ctggagaagc aagggctgat aaacaacccc ctcccatccc caatcccagt actttgaaga
      241 tctgtgtgtt ttgaatttaa ttttgatttt ctcgacttca gcagattaaa gttgaaataa
      301 cctacaaatt acttaatgtg ttgtaaatct tctgaaatta aggtctaatg ggtaacacat
      361 gtcggcaggc aagagacaca gaggggaagc tgggtttctc accagctcaa ggaatgctgt
      421 gaggatctga gccaaaggag agggctgggg caggggatgt ggagtggcag ccctttgccc
      481 acctttcctc tgggtcatcc attccatggc aagggggaca tccagcagag gggctgcgct
      541 gctgaaggaa ctgggtggca ggatgcttgt gggccgggaa gggacaccac agaaaaccca
      601 cctcacctca tttcccac
//
LOCUS       KCPA01002228             649 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 244963tic ultra-conserved element locus
            uce-3093, sequence.
ACCESSION   KCPA01002228
VERSION     KCPA01002228.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 649)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 649)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..649
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="244963tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>649
                     /note="ultra-conserved element locus uce-3093"
BASE COUNT          174 a          145 c          110 g          220 t
ORIGIN      
        1 tctgcaggaa tcagtcatgc tctgtcatct gtctatggcc attgctcttg tttgctataa
       61 tcttcctgtg tcgactgtga aaatttaatc tggttttaat atgaaattca tgaagatctc
      121 tgcttttgag caactgtcaa aacagcttct tatgcttcca cctgaacact tagcttcgtg
      181 agaaccactg ggtaaaaaga gacctccctc tcctcttact ttcccccttc aattgccttt
      241 cccagtgctc tcccttactt tctatctaga tacctattag ctctctgttt caatgacact
      301 gctctggctt ccacgaaagt gctttttaat gtaggagatg tacttcagcc ataacaccag
      361 ggtcactttc tgagtaacat tttatgggat tgattaaact ttaacaccat aactgttgac
      421 tttataggcc aaggaagaga cactgagtgc taagctccgg ataatttgtg cttcaaagaa
      481 aatcagatag agataaggtt taatgtgttt gatgaagcaa ctctttattt tttctacagc
      541 atgtcctatt ttaaaagctc cacaacttaa agcctttaac actaatgaag tccatggaag
      601 aatacgagtt tgctctttcc ttggctccaa atgtgaacac ctcatgttt
//
LOCUS       KCPA01002229             503 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 245071tic ultra-conserved element locus
            uce-6700, sequence.
ACCESSION   KCPA01002229
VERSION     KCPA01002229.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 503)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 503)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="245071tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>503
                     /note="ultra-conserved element locus uce-6700"
BASE COUNT          165 a           94 c           82 g          162 t
ORIGIN      
        1 tgatggaaag aatacctagg cctacacaaa atacgactga ctgctttaca tttcactcag
       61 caatatgcca gtatacccaa gcatctcaat atcactaacc tctgtaaaat gctgtagaaa
      121 aagtggccta aacaaatgaa atgttgatct gccttttatt aatttcattt tttatcttct
      181 tgtatacaga cgtttgacag ctgtgacatt catgggcaat gcatttgaaa aagaagacat
      241 aaatattcag agacatatta gaatgctgtt caatgtaagc acctgtctac ttagtgttga
      301 cagaaaatca tttactttgc tttatgcatg ttctctccag agactacaga ggtcctattt
      361 tatttaagga gctggtccca acatcagtct tgaaaatgca atatatacat ctaattgtat
      421 ttattaagga aacctttggc ttatagtaat actgaaacag ttcagcctct acttcagaat
      481 ttccttctct ggggaaatga aag
//
LOCUS       KCPA01002230             454 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 245178tic ultra-conserved element locus
            uce-7858, sequence.
ACCESSION   KCPA01002230
VERSION     KCPA01002230.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 454)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 454)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="245178tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>454
                     /note="ultra-conserved element locus uce-7858"
BASE COUNT          142 a           69 c           62 g          181 t
ORIGIN      
        1 ataatttttt atgttttgtg catgtgtatt ttacaaagaa atggcgtagc ttggaaataa
       61 aatgctacat tttttcctgc tgttgttaaa ttatattaaa gtgggaaagc acctaagcag
      121 agaagtgtga attctgccaa tctcaaaatg taacgcttat tatctttaaa agcattttgt
      181 tacttttata atacctgaag tgatataata gtgtcagtca cttaaccaca tcttagagta
      241 tagtatcttc atcttaagta ctattatttc cagtatttta ataattttca cacagtcctg
      301 aaatgtgatc ttttgtgctc tgatgacact taaattaata gcataatttt ctggtacttg
      361 caacagttgc tttccatttt gatacatttt tctatatcac atacagataa atcctctaat
      421 aatcattttt atctttatct tctgggaatt caaa
//
LOCUS       KCPA01002231             665 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 245393tic ultra-conserved element locus
            uce-5724, sequence.
ACCESSION   KCPA01002231
VERSION     KCPA01002231.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 665)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 665)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..665
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="245393tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>665
                     /note="ultra-conserved element locus uce-5724"
BASE COUNT          194 a          118 c          133 g          220 t
ORIGIN      
        1 agaaattctc atctaggaat actcctgggc agattattaa aatactactg acgtcggcta
       61 caaagatcta cttgtgtgta tttctttaaa ggggggttaa tacacagtat taccatagcc
      121 aggccctatt atactattgt aatcataagc aagaacggtg attaacgatg gcaatttatt
      181 gtatctgacg aggggagaaa ataggagatg ttgtcgttat cataaatcat atcataaata
      241 accaaagaga agcactcaga aagcttgtgt ggtgtcagca gcaagccctt tcaggcacgt
      301 tagcccagga tgtagccata gaaaccccaa agtcatattg ttatcttagt cttgctgcag
      361 ttatgtgata caacagtatt aacatataga ttaggccatt tataatacta ggtgtcattt
      421 caggttggct tgcttatata gcattttagt ttttattgtg ccgaatgtta gggaaacgct
      481 gcatttttac aggtcagtat agagccattt ataaagtgcc ggcttcacac ctctgtcagt
      541 cttgctaatg tgctctgtta ttgattggtt gtactctatg aattgtcatt gcctaattac
      601 cttgtctttg ctaataattt taaaaatgtt ccctctgtgc ctgcatgcat atttgggaca
      661 aattc
//
LOCUS       KCPA01002232             447 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 245603tic ultra-conserved element locus
            uce-3454, sequence.
ACCESSION   KCPA01002232
VERSION     KCPA01002232.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 447)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 447)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="245603tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>447
                     /note="ultra-conserved element locus uce-3454"
BASE COUNT          153 a           87 c           67 g          140 t
ORIGIN      
        1 gacctagaaa agtctttgaa aattgtgatg atacatcttt catattacca aaatgacact
       61 gttatttaaa gcgctgaaac tgctctttga attctatctc aatatttaac caataatatt
      121 taaagatgtg cacatgaagc gagtatctta ccccagtaca cttttagata tcaatcatgc
      181 tgtattaatt gaaaggattt ggtctaatct cataaagaaa caggcaaact cttggctttt
      241 ctctaaagta aaaatatatc actcatgtca tccattacta tgctataatt atggtaagtg
      301 aagcagaaca gaatcgatgg agcaatttat caatgcattc ccaactattc ctgcacagct
      361 gacgtcatgc agctgcagat actgtccttc aatataaaag atacccggca gtgtcaagac
      421 tttattctga tctactccag cataata
//
LOCUS       KCPA01002233             807 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 245711tic ultra-conserved element locus
            uce-2080, sequence.
ACCESSION   KCPA01002233
VERSION     KCPA01002233.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 807)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 807)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..807
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="245711tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>807
                     /note="ultra-conserved element locus uce-2080"
BASE COUNT          243 a          161 c          155 g          248 t
ORIGIN      
        1 aattatatac aaagaagcaa ttatggttgt tctgagagag atggaaattt acactttgta
       61 aatacagacc tgcttttcct aaaaggcatt tatttctgca gtttttgtat ctggatggct
      121 ctcggtgtat gtttacctgt ctgtgtagga ataaaataaa aactgtgcct ttgtgtaccc
      181 tgcccgtgta gttgtgtgtg tgagcatgta acaattcctg gtcccgtaag ctcttggtgg
      241 acattgctgc ctcagtcact cagcccccac catgaaagtc ccctaacaaa caggattaaa
      301 attcactcct ttcaaccatc ccaggcgttt attccttcct tttcattgag ctacatttgt
      361 ctgatttaac aagataagat ttgagtgctg atgcagcccg ttgttaatgc agcagccgca
      421 tccgccatac catcgacact atgcatcaga gggatgcata aatcaggtat tcaaaaaaat
      481 tagatatgca gcacaccagt tttatagtcc cagcctcaga aattgaaatg gcccagatta
      541 atgtattata tcttacacac tgtccgagtg aatcaacttt aatatattga acagattcgc
      601 agaacaagac tttgttatct aaggagcact cggaagaagg aattgacctg aggatttgat
      661 ttggttcagg tagttcatgt tgtacagcag catttgaata gtttcacata aaaataaaat
      721 ttgtatcaga aatatttcac atcactctgg gcttgttcgt attgcagctc tgcagaatat
      781 tacagaaaca atgtccagca aaaagat
//
LOCUS       KCPA01002234             799 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 245822tic ultra-conserved element locus
            uce-4968, sequence.
ACCESSION   KCPA01002234
VERSION     KCPA01002234.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 799)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 799)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..799
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="245822tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>799
                     /note="ultra-conserved element locus uce-4968"
BASE COUNT          205 a          165 c          180 g          249 t
ORIGIN      
        1 acaaagggac cgatggtgtt ggaaactggg tgctgccatt tggaatgggc tcacagatct
       61 ccttgtggta ccgtgggttg gtggatggca ttagctttcc acagaacgac ttacttgggg
      121 tagcactgca atacccagct gaatctagcc ataagtacct tcattatatt gtttgcactt
      181 gcttagaaag aaaacctttt cctttctagc cacagattag gcaacaaaaa gaccaatttg
      241 tagagcttgt aaatgccact tgttaatcac atacggtaca attattaatt ggatgtatta
      301 agtcaactgt aattgaaata tgcccttttg ttacctggcc atgaattatt tttgaaatgt
      361 tgtcattacc caccctgctg tgaggtttat ctcttctgtt catcctaatt aaataaaaca
      421 tactgttgtt cgctggtctc gcgttgaagt gaattacctg cctgaaggct cgcgctggtg
      481 tcggcttgct tcttgttgca gcagcacccg ttgactaaca catttacttt tagattttca
      541 tttcaaaggg ctcagtttgt gcagtgtgac aggtgaatgg tgaatgcttt acaggacttt
      601 caagagctga acaaacagta aaggacttat tgctactgca gccgtgtggc aagtacaaat
      661 gtaaggcagc ctttgtggca agtgtttcct ttgctggata gaggccactc aggagacctg
      721 aagggctcac ttgggtatgc tggaggtgaa ataatctcag tcatgatctc atttaaaccc
      781 accctacctt cgtgttctc
//
LOCUS       KCPA01002235             539 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 245933tic ultra-conserved element locus
            uce-5080, sequence.
ACCESSION   KCPA01002235
VERSION     KCPA01002235.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 539)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 539)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="245933tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>539
                     /note="ultra-conserved element locus uce-5080"
BASE COUNT          156 a           93 c           93 g          197 t
ORIGIN      
        1 taatgtcctc gccgcatagg tttttaatgg tttacccatg tatatatgat tgtgaatttc
       61 atgataaatt taggattgaa agaaacatta ttctatggca ttgtctaata aactgtataa
      121 taaattaact gagatttaaa ggcattttta aatcattcac ttaagcattt aaattatagt
      181 tacaggctag atgactttcc atgcatgtga actctattat tctgtcagac tgaccagtgg
      241 tcttgagtgt tcaaaggtca gtggtcacag ttgtcctgaa ttaccagtcc ttttttcatg
      301 aggaccctct gctgcgttgc atgctgtaat cttcttaatg gcttcattcc aatattcaca
      361 cataatattt tagatttatt gactgttaga aatactacca tgccagtagc agttccgcta
      421 ctcctaaggt atttaaaatt ggaagaataa atcagggcaa gactttcagg aatcctttgt
      481 tttcttggac gctcttctga caagaaagct tgtttttaaa tttcatcatt tcactgtgg
//
LOCUS       KCPA01002236             806 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 246041tic ultra-conserved element locus
            uce-19, sequence.
ACCESSION   KCPA01002236
VERSION     KCPA01002236.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 806)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 806)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..806
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="246041tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>806
                     /note="ultra-conserved element locus uce-19"
BASE COUNT          280 a          147 c          151 g          228 t
ORIGIN      
        1 aaaagcccag atggggacta aaagctttgt gtatgtaggt cctacaagta acttactctt
       61 atttcctttc ccactaacca tgaagtcaaa aatgagcggg gccactgagc taacagagaa
      121 gagagtttaa agagttaaag aagtaatact atttaaacag ggttgcagaa ctcctattaa
      181 aaatggcagt actataaatg ttctagtatt gtcaggaatg ttctgttgga tgacactata
      241 ctgtgatttg tacacacagc ggaccagagc tgatgggtga atgaaatgat ccataaccct
      301 cactgacaca tttagagcag ttcagctgca cacggagaac agtccatcat ttgcaccctt
      361 ctgtgaaagc tggctttacc aagtgtttca atgaaatatg tgcaacttcc catttaaatt
      421 agtaccacat gaaccatgaa gagcaccaca ggtatctgtt gtagtaccag cctaatgcaa
      481 aagtggcctg tcttgtaatg ctctaacagg aaagacatac aaccattcat ctgtaacata
      541 ttaaaaccag aagaaataaa ttactctata gatgaagaat tattgcttgt ggagagaatg
      601 tgcaaaggta gttctaaaaa gcagctttta ctaaaaaatt attgcaacag catttgaatt
      661 cctaatgcat attaaaccta gttcgcataa tcataaatca tcatttttaa atcaagaaaa
      721 tctgcttgaa actttttaaa ggtttatttt actagttcag aactatttca gcattaccac
      781 tgggggaagc acagtaggag tgacta
//
LOCUS       KCPA01002237             513 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 246154tic ultra-conserved element locus
            uce-3402, sequence.
ACCESSION   KCPA01002237
VERSION     KCPA01002237.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 513)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 513)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="246154tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>513
                     /note="ultra-conserved element locus uce-3402"
BASE COUNT          165 a           96 c           94 g          158 t
ORIGIN      
        1 gaaagaaatt aatctaaaca agcaaattag tattacccgt cttagatgtt ctttaatgca
       61 aagccaatag ttcttgccct ttatgcacat gctcctacag taactaatgt acagtagcca
      121 tcaacaaatt acaacttgtg acacttttgc tgctgcaata ttaagcccaa agtcctatgg
      181 agaaaatata tggtttttat taccaaattg ttcttgttta caattctaat atcctcttca
      241 ttatctactt ttccagacat tttaggcagt tctgaagacc tggggcagca ctagtcctgt
      301 cataaagaga aattaatgtt gttaaagatg gcctagctgc cctctgggac agctgaagat
      361 gtgaaaatat aaggttctgt tttaaagatg aaaatgatta aaggcacagg caccttgctc
      421 ttagtgcagc cactaaaact tttaataaaa tacttcagca ggctgcttta cttcttccac
      481 tgtaagtctt aaggagagag aggggaagga agg
//
LOCUS       KCPA01002238             704 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 246265tic ultra-conserved element locus
            uce-4038, sequence.
ACCESSION   KCPA01002238
VERSION     KCPA01002238.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 704)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 704)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..704
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="246265tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>704
                     /note="ultra-conserved element locus uce-4038"
BASE COUNT          232 a          119 c          120 g          233 t
ORIGIN      
        1 tgaaaggtta atagaagtcc ataattttca gacatatctc tttcgattag ctgctcagaa
       61 atttccttaa aaagtgtaaa ttgttccatt ccaaaactgg agactgtatc caatttgtgc
      121 ataaattgaa attgtctttc taatagactc tttggaaggg ggttgccttc aaggtaatga
      181 tttaaacata aactgaccct tgatgaggga gctggagttt cagtttaatg tgtttctgca
      241 attttccttc gccttcagtg ccttcaaatt ccacacaaat aattccttca taacaagtgc
      301 cttttcagaa gatgtatgct gctgacagtt aatataaaat tattgcccct gaatgcattt
      361 tcgtaattac ttcccagaga actgtctttg tgttagaaga catttcacac tttagtaaca
      421 taagtgtttg gggagaacat gagtaataat tacagacagt ctttcagtga aaataaacct
      481 aaaaaatgat gctaatgtta aagttggtta gagacagtga ggaatttatt catcacatta
      541 tgcctgtctg tatattttcc aagtttaata acccttcagt aactaaactt ccataaagaa
      601 cagagaaact gctttctaat ttttaagcaa taatgaaaag tgacatgctt ctagagacag
      661 aataaagaaa ctcaatctga atgctcctat aggagatttc tgct
//
LOCUS       KCPA01002239             401 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 246378tic ultra-conserved element locus
            uce-5243, sequence.
ACCESSION   KCPA01002239
VERSION     KCPA01002239.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 401)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 401)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="246378tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>401
                     /note="ultra-conserved element locus uce-5243"
BASE COUNT          129 a           71 c           88 g          113 t
ORIGIN      
        1 agggtggaaa gagagaaaat gaaatccaga tttgtaattc ctaacaggag aaattcgatc
       61 ctttccaatg tttaagtaat atttcctgta aaacatacga ggccatctgc agagctgttt
      121 ccagacacat tttgaagtgg caagggcaac tgaaagagac ccgaatggag gctggcattt
      181 cacctctggg agatggagca ttaaaggttt tgaaaagctg gttctacaat tttacaaagt
      241 attcaaccac tgcatagttc ataatttgtt taatttacct accttttata ggtatgggga
      301 ggggaaatcc gctctgtaag agacagtata aaaaccaaga cagctgtcta atgtacagct
      361 atcaagattg cttcatgatt tcagccgatt gtttacaggc c
//
LOCUS       KCPA01002240             698 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 246490tic ultra-conserved element locus
            uce-6856, sequence.
ACCESSION   KCPA01002240
VERSION     KCPA01002240.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 698)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 698)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..698
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="246490tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>698
                     /note="ultra-conserved element locus uce-6856"
BASE COUNT          214 a          133 c          146 g          205 t
ORIGIN      
        1 ggtgctttgg aagcacacca ccttggcact tgatacatca gtaatctttt ataatcagaa
       61 atagtataat tgtgggtctc tggcttaact gtcaaaggat taaggcacat cctgatcaat
      121 gcaagtgcct tcccagaaaa caggcaggga aagatttcct gtagttagca gcaatgaggg
      181 agaggaactt taaaaacaac tttttatttg ataactacag aaatctagct aagtcttagg
      241 gatttagcca gggaacatat tggttccagc agactatggt aaagttaatt aaggatgatt
      301 aatggagcat tttccttcca atgatatctg tgacagaaca aagctgtctg aggcttgtca
      361 agcagaattt gagttgaatg agtatttatg tgatcaaatc tgaagggctg cctcttgaca
      421 gagcaaggat tcatcaatca attgcgcagg cttgcagtgg tgggaaattg gtctatcagc
      481 atagctctgc tcccatcccc cattttttca ttcaatcatc cctcaggcta caatgcatct
      541 ttagctttta cctctgacca ccttaagggc tatcagagaa aagtaaaagc aagagctaaa
      601 acatctatta tagtggttat ttctcagctg tactcataca attgatttct tttaagtaaa
      661 ggcccgggca ctgtaaagtg atacaagcct gttcaatg
//
LOCUS       KCPA01002241             702 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 246601tic ultra-conserved element locus
            uce-3688, sequence.
ACCESSION   KCPA01002241
VERSION     KCPA01002241.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 702)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 702)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="246601tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>702
                     /note="ultra-conserved element locus uce-3688"
BASE COUNT          206 a          152 c          122 g          222 t
ORIGIN      
        1 gtaacctgca cacacatgtg ggtttcatag caaagggttt gtcaacagga ttcaaggtca
       61 atatgtatca acataagacc tggctaattt actttcattc atgcacttga agttaagcag
      121 caaagaaagg gttaaacata aagtatttca ccttgaacct tgcactctct ttatctagca
      181 caccataata aaagatcaag agttcctgct tattatctta tttttcctcc ttgttccact
      241 aggctagggc ccagactagt tatggattaa cactgtgatc aatagtaagc ttgctgtctc
      301 gctctcggca ggggaaaatg aactcaaaat gcagtcaaac tcttattgat caaggatata
      361 ggtctcactt tcattacctc tgtctcctga taacccacat ataatgtgat gagttgctaa
      421 tctctctgct tttcaatgga cccttcaccc ctcctgtctg cacagtagag cttttatttt
      481 tgcctcttct gtgcaatgct tgtagcatta actctcactc tattgccatc atgcatggtc
      541 tatcaagact cataaaagga cttttaaata gaagtgggcc aactatatta tgatttttat
      601 ctccaagcaa atgagttacc cttcaatgac aaagagtggg tactggacta ctcaaacccg
      661 tctcagaaga aggtgtttat gtggatactt gcattaaaaa ta
//
LOCUS       KCPA01002242             727 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 246713tic ultra-conserved element locus
            uce-3122, sequence.
ACCESSION   KCPA01002242
VERSION     KCPA01002242.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 727)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 727)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..727
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="246713tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>727
                     /note="ultra-conserved element locus uce-3122"
BASE COUNT          224 a          147 c          123 g          233 t
ORIGIN      
        1 ctaaaacttt ctctttaacc tactctagtc atctgtgaac tgctaaatgc ttaacaattt
       61 caatttggca gcaatagttt tccatgtagc aagaacatgc aagatgaatt agtgaagatc
      121 ttaggagctt gtgaaaaaga actgacccat ctaaaactgc acatcctttc agaacacagt
      181 cccaaatcgt agtggtgtcc caaatcacag gattaatgtg tctatggaca gacctcttat
      241 gcctccagaa tgaagtactc cttgctaatt tctcttcaag acaccagctt aattgcattt
      301 taaacaaatg ggctgctttg ctggccaact tttaaatgag ataacagcaa tgttcactct
      361 ccagcagtga tgagtgcctt gcagtagatt caaaactctg ttcaataaca ggtttaatct
      421 cacaccagca gatttactgc agaataaact gccactgagc tcataattag taaaacccca
      481 acctactaaa tattattttc caaagcagca ggctatgttt tagtggaaaa tttcagtcct
      541 tttctttgta tgttttattg attttatgta tgatattggg aattcatgct atgatttaag
      601 ataatggtct ttatcgatca cttaagcagt tgtttagcta cacagtaaca aaatgatgct
      661 cccattcatg gaatatgtga tactgacagc ggggagacca cagtgcttcc cttcttaatg
      721 tttattt
//
LOCUS       KCPA01002243             583 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 246822tic ultra-conserved element locus
            uce-3011, sequence.
ACCESSION   KCPA01002243
VERSION     KCPA01002243.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 583)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 583)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..583
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="246822tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>583
                     /note="ultra-conserved element locus uce-3011"
BASE COUNT          186 a          107 c          106 g          184 t
ORIGIN      
        1 aaagctagtg tctcagtcat cagacgagct gtggttgtta agggatgcag gcccttatcc
       61 agatatttta aagtaaatat tttatctagg gaaaagtatg gaattcataa tttgatggcg
      121 taaaaggcca ataatatgtg acagcatgat ctcattagaa aaaggaattt tagcccagtg
      181 tgatctgagt gactagttcc aaaatgtgca gtgaatttta tagttcgtct ggctggcaga
      241 gttccatgct cctgcattcc ccaatggtaa atatttgcaa cagatttcac attgtaacac
      301 aagggctcct ttcacaaagc aggtcatgta acactgcaaa aaaatcaagg ccagggcaaa
      361 taaacaaaaa gtcatgccaa gttcaccact cccaaagatt cctaagcctg gctgtgcata
      421 caaacttcac ttgctactca tcaacatcag cagtttatgg ccagatggtt ataaatttac
      481 attctataaa attttagagg atgttatttt ttccactcag tttgttaatt aagttttggt
      541 ctttttattt cctcaaacat aacagttcaa ttttttatta atg
//
LOCUS       KCPA01002244             523 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 246930tic ultra-conserved element locus
            uce-7507, sequence.
ACCESSION   KCPA01002244
VERSION     KCPA01002244.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 523)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 523)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="246930tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>523
                     /note="ultra-conserved element locus uce-7507"
BASE COUNT          167 a           77 c          102 g          177 t
ORIGIN      
        1 tattttagca taggcattaa ttgagcacac tggccattca ctgattcttt tctgtcagct
       61 ttgggttatg tatgcatttt aacatttaac ttcactgcat gcaaaatcca gaaatgaaaa
      121 gtgtgcataa aaatatacag ggcattactt atttatatgt aaaaccttta ttctattttg
      181 ttattttaga ttaaatcctg tttcaattct attctctcag ggaagcacta acagtttgag
      241 ctcagcgtga aagccatcaa acacttgagc tgaaatttag attgggcaat tttgcctggt
      301 gaagtagaaa aggacatgtg gaatggcaga gaacagaatg gcttatggaa aggcagatgt
      361 tttaataact tgttgtctgg tggaagcctc aaatatctaa atttaaacac tgcaatatat
      421 taaagtgcat tgctgtcggg catgctcttt atgaatgaga gtaaatgtgc atatttgtcg
      481 ataaaacacg ctttttacaa attagaatta attggaaggt gtt
//
LOCUS       KCPA01002245             822 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 247042tic ultra-conserved element locus
            uce-6638, sequence.
ACCESSION   KCPA01002245
VERSION     KCPA01002245.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 822)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 822)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..822
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="247042tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>822
                     /note="ultra-conserved element locus uce-6638"
BASE COUNT          216 a          176 c          170 g          260 t
ORIGIN      
        1 gacatcgcaa atctcccatc tctgctttgt tggtctatat gcatgaataa ttttcccagt
       61 gcttgtttgt agctgagcgg gagaaagaga gaattaccgc cgcacaatct cttgttgtcg
      121 gtgatcagca ttccgatggt ctgagctggc ttacaacagt gtaaagacat cagtggcatg
      181 tgttataata tattgagcat tgtactcctg aagaacgcac gaaagaaaga acattgttct
      241 actagggagc aattcatcgg gtttttccca gagactcttg ggtcaagttt ttataggcct
      301 atttgatttt caaattcttt ttcccccttt ttcctctcag tgagccatag tgtccaaact
      361 tgtctacatt tacttcccat gttttgtgca tggtagatgt cctttaaaaa gagtatctca
      421 aataagtctt tattcttgtt ttgttggctc ttattctatg ttttcatgaa ctctggccct
      481 ggccatggca actgcaagaa aaatgttaac attgattgac aggattaaga aagcctccat
      541 gcctatccgc atttcaaaca ctttgggaac aatggtgttt ggtgtgattg aattaatgag
      601 atatcgtgga ctgtcaaaag agcacacata ctttacataa acctgattat ctttgcatgg
      661 cagaaatgaa aaaaaggagg gaacagaggt ttggctttca ctcatacctc caaaggagcc
      721 atcaaagtgt gtgtgccctg gctcagagag tgatgtgccc gctcaactgg cctgccctcc
      781 ctttctctcc acatactgcc tggctctgct tagcatacat ca
//
LOCUS       KCPA01002246             524 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 247151tic ultra-conserved element locus
            uce-4980, sequence.
ACCESSION   KCPA01002246
VERSION     KCPA01002246.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 524)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 524)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="247151tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>524
                     /note="ultra-conserved element locus uce-4980"
BASE COUNT          145 a          107 c          117 g          155 t
ORIGIN      
        1 gctgctctgt ttttaaagct gctttgaagg aatgctctcc agcggactgc cgcctgtcac
       61 tgctccctgt catgtgtccg ataattaaaa tctgactgat ttactgactg gcatcaacca
      121 tctcagctca agagttagaa gatgttcatc cttcccaagg ctaaatttac ttggtgaaaa
      181 ggggccgctt gcttccagcc tgagctgtca ttcagctgcc gtggaaacca taaagatagc
      241 taacagagcc ccagccagca gtctttagtt tattttattc taatatttat tgccacccag
      301 aaaatgaaca taatacagac aagttagtga gagcactgca ctagtgattt gtgaggctgg
      361 tgtggagtga gagcaaaaca gtcctgcagt attaaaataa aatagaacag cggtgtttcc
      421 caaaagtatg gcagggctgt agctgtgttt attttaaccc taatggggta caatttatta
      481 ttacatttta agtagatgct ctcttgaaga aggctgcttg ggtt
//
LOCUS       KCPA01002247             306 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 247248tic ultra-conserved element locus
            uce-652, sequence.
ACCESSION   KCPA01002247
VERSION     KCPA01002247.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 306)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 306)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="247248tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>306
                     /note="ultra-conserved element locus uce-652"
BASE COUNT          103 a           51 c           55 g           97 t
ORIGIN      
        1 tttttaattt acagattttg cagtgtttat gtcacttcaa cttcttgttc cttattaaga
       61 cttcagagat acaaaccagt agctcagtaa ttgctttctt gaatctgcct ttaataatta
      121 catttagtaa agctgtatcg aaaattagaa aggcagagac taatggaaaa ctagattttt
      181 cactgaatta gaaagcaaga caatccatat attgacaaca tttcaagttg aaacagatca
      241 ggaaaactgt tttggactgt ctgtgcaaag aggcaaacac aggcctgatg tgcagtggca
      301 tctgca
//
LOCUS       KCPA01002248             734 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 247359tic ultra-conserved element locus
            uce-1602, sequence.
ACCESSION   KCPA01002248
VERSION     KCPA01002248.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 734)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 734)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..734
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="247359tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>734
                     /note="ultra-conserved element locus uce-1602"
BASE COUNT          230 a          149 c          122 g          233 t
ORIGIN      
        1 gaaaccccca tcatatgttt ataaatacac taacattagc attttacttc ctcataaatc
       61 tgcaccaaac attcaggcac aagatagaaa gccctgtaaa acaatgatat attctctgct
      121 tgcaagactt gcctagtggc ccattcattt ttagcgctgt tcttcaaaca ttactttctt
      181 cgctcatgcc ccctcattta aaatccattt taatttaaag atgttcgatg cagtcctagt
      241 ggtacattta ctcatcctgg ttatacatca tggagcaggg aaaagaaaat tgtttaatct
      301 agagatacgg ttcactgtgg tcaccactga acagtggagt aattaccaga tcagctccgc
      361 taaaaatgca ctcagggtgt tctgtgacct atcatcttct aatctgcata gtgaagtata
      421 gcttcataac tataaattgc tgacttaatt aaaaccagga cctttctgtc atttaattac
      481 agggagaaag gttattgctt aaatgcaatt ttccaaatgt gatttcttaa cagttattaa
      541 ctgcttcacc atcatttatt gtttcagatt tttcaatttg aaaatagtcc ctgtgacaga
      601 agtaatgact tcatgaaaaa ctcaatctag atggagctga gcagacccat ttgtttctcg
      661 taagtggagc agacagaaaa cttgaaaatg tcacaggagg atcccgtgat tgctccactt
      721 tacaggagta atta
//
LOCUS       KCPA01002249             577 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 247468tic ultra-conserved element locus
            uce-7755, sequence.
ACCESSION   KCPA01002249
VERSION     KCPA01002249.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 577)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 577)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="247468tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>577
                     /note="ultra-conserved element locus uce-7755"
BASE COUNT          146 a          134 c          133 g          164 t
ORIGIN      
        1 ccacctctat cggatctgct tccaccacgg ccaccacctc tgggggcccc acggcttgaa
       61 ctactgtaag aatcccgagg aggtggatag cccctttcca tggatggggg aagacccctg
      121 tcttgtcttc caacacgatc acggccactt gagtagacat cacttctgct gcttgagtaa
      181 ctttctcggc ttccatatcc atctcgtgtg ctgccgtaat catcatagcg actgcttcca
      241 ccatatgatg gcgggggccc tcgagcaggt ggagcactac gtgagttacc tgcagggtca
      301 atggtcaggt aatatggcaa caccataagt tatagagaac aatttcaaat ctgaatttac
      361 agaattgctg aaatgtttac aatctgccac actaatggta ttttaagtgg gagtgattgg
      421 atttgaagga atgaagacgg tttgtttatt caggcaggct ctttaactgg gtattccaga
      481 atagcttgtt attttagaga agaaactcat attttccaga gacagctgtc attctgcacg
      541 gtagactttg cttctttagc ttatagcttt aacaaga
//
LOCUS       KCPA01002250             319 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 247568tic ultra-conserved element locus
            uce-3195, sequence.
ACCESSION   KCPA01002250
VERSION     KCPA01002250.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 319)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 319)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="247568tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>319
                     /note="ultra-conserved element locus uce-3195"
BASE COUNT          103 a           50 c           60 g          106 t
ORIGIN      
        1 tgaaccctca ttcttcagta gaaatttata cagtaccaaa ggtgggtgat ctgaagatct
       61 agtaagaatg acacatcttt tttatttaaa tattattgct ttttaggcac tgaattttgg
      121 agatatgccg aagtacttgt gggagatttg ggtacctgac aaaccatggg tggtaagata
      181 tcagatccac tgcaataaat aaaataaaca tttaatattt ttgggccctg ttgtcactga
      241 attcaatgga ccaaactagg gctcataaga agtgcaatac tgcaaatgta ttcaagtgta
      301 tttccattct tttcaatat
//
LOCUS       KCPA01002251             794 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 247675tic ultra-conserved element locus
            uce-7012, sequence.
ACCESSION   KCPA01002251
VERSION     KCPA01002251.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 794)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 794)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..794
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="247675tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>794
                     /note="ultra-conserved element locus uce-7012"
BASE COUNT          263 a          127 c          146 g          258 t
ORIGIN      
        1 agaaaaacag taaaaatatt ccctctagaa atgaagggaa atgtggaact ttgtggtgag
       61 aagctagctt gtccatgtta tgaatagaga atagagcata cagtttttca tatctgactt
      121 gcaacagaag attggagcat atagaaatta atgttactga attatttaat agtaactcaa
      181 acacatgaaa agaagaatta aagaaacata tgactaaaaa ggcatttaaa atgaaatcag
      241 aagcttcaac aaatatattt ttcccttgca gtcaaaaaag taattatcaa aattgttcag
      301 aatatgttgc caattactct gctccataac tgctaacttt ctcagttctt ctcttgcctt
      361 tgctgggctc tctgtcactg gaaacatctt aaaccaattt aaagtgctac acctgaataa
      421 acatgttgta aaagtgttta tgtattgaag tgggtcagtt caaggtatgg tatttggctg
      481 gaacttctaa tttctctttt tactgcaaaa gggctgccag aaggaggaag tctgagctga
      541 attaatacat ttgttacagt ggaagtagaa tggaaactac tttaaccaca aatcaaactg
      601 cctctttcat ttacgccagt gatagagttt ttttaagaaa tatagactct ggcatgcagc
      661 cactgtaagt ttgtgcttga aaaggaaacc tatatgctta tttctttaag gtttactcct
      721 atgcttgttt gcaagttctt tttgattgag ttaacagcat tatacatttg tgaggcagat
      781 gctccttcgt tgcc
//
LOCUS       KCPA01002252             683 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 247787tic ultra-conserved element locus
            uce-7145, sequence.
ACCESSION   KCPA01002252
VERSION     KCPA01002252.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 683)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 683)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..683
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="247787tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>683
                     /note="ultra-conserved element locus uce-7145"
BASE COUNT          207 a          127 c          136 g          213 t
ORIGIN      
        1 attcatgata tacagtttat tgttgataaa ataatgtctg aatggtgggc tggcccacga
       61 gtctcacagc taaagactga ttcgtaaatt gtctgaaatt tgttggcatc tgttttttgt
      121 ggaatttata cggatgggga gcagtctgag ctatcccctt tacaactcaa ctcatagata
      181 ttattgagaa ttcatattgc ttttattatt tggtaaaaat ggacctaatg cttgttggct
      241 ttaaaacacc tactagcgct gctttctctc taaaatataa gacaaggccg aagcttaaat
      301 taaaatcctc aggttcttat ctctttccca caggaaagca aatctgtgtt gaaaaccgta
      361 aaattaagag gagagcaagg atagcataat ttagcaaaaa ttcatggcac cagattctga
      421 gctatatgac tggagggata ggtcagacat taagaagata ctgcctgcta atgcaagttc
      481 cttaaggtgg tgctctggaa acaaggaaag tggaaaatgc tgcactggtt cccgtttgct
      541 ccctttcctc ttaccagcct taacaataaa tggagttgtc catttaataa ctcatctgct
      601 tccagaagtc cagaaaaagg agctatgtcc acatctgctt tgtgccagga tttcaatagt
      661 gaaattaatt tcattggcct ctt
//
LOCUS       KCPA01002253             615 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 247895tic ultra-conserved element locus
            uce-2530, sequence.
ACCESSION   KCPA01002253
VERSION     KCPA01002253.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 615)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 615)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="247895tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>615
                     /note="ultra-conserved element locus uce-2530"
BASE COUNT          209 a          156 c           84 g          166 t
ORIGIN      
        1 cccaccagga aaggcatatt cccagctccc acactattcc tgtttaacat gagaatatca
       61 tgatcaacaa ctgtgatgtc taatgactca ctctctactt tatatgatga tccacgccaa
      121 tattaattat gataggcaat aagcaaggcc cacatacatc tcccttcact tcaaaccaca
      181 ctgacaatcc cctccagtgc ctgcatccat aagcctttgt tcccctgcag atctccctta
      241 acagcccaat aatctttcct catcctctat agagttccaa aactcccaga caccatctgg
      301 ccacattgag ttgtatgtct acttaattga catgcaaact aaatgcaaac tacaaacaga
      361 atttaacagc acatcaccag ttttaagaca caatccgtca aacatttcag aggactatat
      421 atatcctgca cttgcaaatc attgggcata atgtctgaca tccagtaaac cctttataga
      481 catttgctta agagcaaaga acacaatatg gctgtaaaag aaatccaggt attgaattat
      541 gcaagaatat aaaaggaaag gacaaatttg aatcctatga cctggtgatt tttaactatt
      601 ggcacccaaa aatct
//
LOCUS       KCPA01002254             571 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 247998tic ultra-conserved element locus
            uce-5225, sequence.
ACCESSION   KCPA01002254
VERSION     KCPA01002254.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 571)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 571)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..571
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="247998tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>571
                     /note="ultra-conserved element locus uce-5225"
BASE COUNT          165 a          104 c          125 g          177 t
ORIGIN      
        1 caggctctga gatttcaggt ctgcagggtg aggatggaac tcttccagct gataaggaaa
       61 gagttgtgtg agtaagaaag agaaggagct gttcatcaaa cttgctgtac agcacctcca
      121 gccattgcat ttggttgggg gaggctttag ggggaggagg aggagcggga gaagtattag
      181 ggctgtgagc cactattcat ttacaaacta taattaattt gatgtttaga ttaatttctg
      241 atgcactctc aaaggtgcac tgaaagcatt tttcctttat tataatgttg attgcttatt
      301 ggggagataa atctaactgt cagttatgca ctgacttacc aaaactttca gaccaagcaa
      361 gcatgtatgc ataaggaaca gctgtttgca gccctccagt taaagggacg gctctgtctt
      421 ttcccaataa ctcacattaa agaaaatcta tacattgtac acagggactt ctgctttctt
      481 ttgtagctca acaatttatt agacaagaat atgttagtag aatctatctt ctatttatct
      541 ggatgtccac tatcactatt ctatccatct c
//
LOCUS       KCPA01002255             577 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 248106tic ultra-conserved element locus
            uce-4824, sequence.
ACCESSION   KCPA01002255
VERSION     KCPA01002255.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 577)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 577)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="248106tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>577
                     /note="ultra-conserved element locus uce-4824"
BASE COUNT          196 a          110 c          104 g          167 t
ORIGIN      
        1 aaaaaaaagc acaccacaga tgctcaagtg ttcattaccc aaatctttgc aggaagcaat
       61 tgaatagaat tacctacaaa gagaatgtgg cattttaaca ttatacaatc atgttcctca
      121 tggcaggtga catctatctc cttgatggag actgtatctc aaaaatacat tcaccgagct
      181 gtctataaat tcaaataaac cctgcaattt aattttcaac atatccatat gtttgagaat
      241 caagctttca gcagttgagt acagtttgtg ttgatactac tgtacccagt gaataaggag
      301 aaaacaatgt agtgtcactg cagctatagc caggtttagc gggggtctga agggagaaag
      361 gattcgtccc agtgttctgg gcctaattca ggatccagtc aatagaattt ccaagaagtt
      421 catcctttct tgcttggtca aatgcaacct ttttcatggt ttagaagaac tatgtcatta
      481 cttagttaga aacacaaaga accaaatgtg tcattgtgca ccatggaaat ccagccaaga
      541 atcttttaag ataaaaccct taattcttta agaaaaa
//
LOCUS       KCPA01002256             633 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 248217tic ultra-conserved element locus
            uce-5852, sequence.
ACCESSION   KCPA01002256
VERSION     KCPA01002256.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 633)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 633)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="248217tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>633
                     /note="ultra-conserved element locus uce-5852"
BASE COUNT          185 a          114 c          107 g          227 t
ORIGIN      
        1 tgttttcctg atttattaat tgttgaatcc aacagaaaga aaagtcatgc gctcttcttt
       61 ctttttaaaa tttcattcca ttgtttctgt tgttccagga aggtgtaaat acattgtacc
      121 ctactatttt atgttttaaa aaggtgacct atactttcca tttcaaatgc ggtttcttta
      181 atgaaaatat tgtaatgtca gtccatgcaa agcaaatgca tattaatatg cgtttacatc
      241 tgtctcatat taatattcat gcctgaatcc acatccctac acaaagccaa ttttctgacc
      301 atctgtgtga tggctggtgg atgcaatgaa taaattttat ttgtgagggg agtgataaat
      361 catgtatctt ctgtttttca cccacaatct ctcctcttag gtgctgaaat gttttcattg
      421 tggttaagga aaaccaaact gattaacccc ttagcacatc aagtagcttc atttgtcaaa
      481 gtcttcaaaa atcatgcacg gcacgatatg actgagaaag tggaactgca gttttaggag
      541 gtttaattat ttacttcttg aattattcct gtctcagaat cacactatgt agtagagacc
      601 tcatactgat gttgaggagt accttagtat gca
//
LOCUS       KCPA01002257             618 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 248324tic ultra-conserved element locus
            uce-219, sequence.
ACCESSION   KCPA01002257
VERSION     KCPA01002257.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 618)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 618)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..618
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="248324tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>618
                     /note="ultra-conserved element locus uce-219"
BASE COUNT          192 a          107 c          130 g          189 t
ORIGIN      
        1 aaatgttgat cattatttac tttccctgtt ctttcagagt aaatatagct gttttcaaga
       61 ctgaaatcaa catgaagtga ctgaagatgt tttgaaaact aagtaaacct gtcatgagct
      121 tgacaaggct gccaatgtaa aggcaaacag ctgtacaatg gcagcagaga ggcactgtgt
      181 tgtgtttaaa tacagtcagg cagaagccag tggataatgc tcagtaatgg gttaatcaat
      241 acttattatg gttttattgg ttcactaaag agagaacaga acctagtgag cacagagtca
      301 aaaaatcact gcatctgatc tagataacat cttctctccc ttagggattt ccctattcaa
      361 gaatccaatt taccatgcct gattgacaag gattggatcc tagggaatca cataactctt
      421 tttaggaccc aataaaatcc taatggattt gtctgaccgg tcaggagatt caagttttac
      481 taaactgagg ggctttgttg caattagcct gtattctact tgcagttgaa aagctattag
      541 gagtcattgc tttctaaaat gctggagtca tgctgggttg tgaatgccag atagagttac
      601 ctttctttgt aaaaggag
//
LOCUS       KCPA01002258             591 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 248434tic ultra-conserved element locus
            uce-4760, sequence.
ACCESSION   KCPA01002258
VERSION     KCPA01002258.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 591)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 591)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="248434tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>591
                     /note="ultra-conserved element locus uce-4760"
BASE COUNT          164 a          114 c          121 g          192 t
ORIGIN      
        1 gtgggtgaac cagaatacct cagcctcttc ttccccacac ttggggttca agattaggga
       61 agacctctct gttctgcaca ttataaaact tttagcaaga ggctaatgaa atgcaaagct
      121 ttctataagg ccaacactag ccttcctatc aaatcatctg aaatatttat ttgccctctt
      181 gaataattga taggggcatc agctctcccg gtcaattgat ttattaaggg actgtttgga
      241 attaaacagc ttaaagatat tagatttagc agcgaccttg cttgttagca tattcattta
      301 cctacgggag ctcccattag atattgttaa tacatgacgt tcccagtcac ggcctggatc
      361 tcctcaaatt gcattaacac taggctgttt agccacagaa taacaggttt gattgagtgc
      421 ttgggcttgg tgtaattaga ttttcctaga aaaactattt taatggtgtg tgtgttaaac
      481 tagatatgtc atcagcatta ctgtaattgg caaacaggag ctttggagac ctggatgtgt
      541 gtgaatgttt gtgtttatga cttgtcctgc cattgtcaca gatgccatat a
//
LOCUS       KCPA01002259             495 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 248540tic ultra-conserved element locus
            uce-7962, sequence.
ACCESSION   KCPA01002259
VERSION     KCPA01002259.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 495)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 495)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="248540tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>495
                     /note="ultra-conserved element locus uce-7962"
BASE COUNT          138 a          120 c           93 g          144 t
ORIGIN      
        1 ctgggctggg aacaggtgtg tgaaaatcag cacccaggca cccgctcgaa caacgttgtt
       61 ttttccttgc gtgccataaa tcagagtgct aatctttcac tgtccggcga gatctctcac
      121 tgggagggtg ataaattgcc ctccagcccc tgacagctgc tgggaaatca ctcacagccc
      181 gagagaaacc tctaaatctg acattataga gtgttgaaag gaagaatgtc tgtttttata
      241 acctacctca gttataataa atatttaaaa tccacattaa catcctctta tagttacaat
      301 ctgccctcta tggaacagtg tccaacttag atttaattag caactgaacc tttgcagtcc
      361 aagctcctat ttaggctgaa gatccaaatc tccagtgaaa tgcttctgtt ttcttaaact
      421 acctgcactg taataaatat tcaccatgtc gccaggcagc tctgctggag acagtgctct
      481 ttttgtcttc tcaaa
//
LOCUS       KCPA01002260             468 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 248649tic ultra-conserved element locus
            uce-3526, sequence.
ACCESSION   KCPA01002260
VERSION     KCPA01002260.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 468)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 468)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="248649tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>468
                     /note="ultra-conserved element locus uce-3526"
BASE COUNT          144 a           78 c           97 g          149 t
ORIGIN      
        1 tggcatttaa attcaaaagc acactgaaga cagtttccca tttagccagg ttgtctcttc
       61 gggaagcaaa ggtgcaattc ccatgtaatg gcataaaaaa aaatgccctt gcctatatat
      121 ttttgcttat caacaccaat tacttcaata aaaacagtaa aagaagaatc tgtgcttaaa
      181 aatttagaaa acaaataatt ttattctgtt tctgatcttc atttatagca ccagcaacaa
      241 gtggtgcagg ctgtggagcg tgccaaacaa gtgaccatgg cagaactgaa cgcaatcatt
      301 ggggtatgtg gtctttccat tttagctctg atagtgtttg taaatggcat tttttttttg
      361 aactcatttc catcaggtgg gcaaaagtag tggggagtgg tgaagttcag tagcttgatc
      421 ttcatttctt gcgaagaaga ctaatggggt aattaatgtg ttgtatct
//
LOCUS       KCPA01002261             446 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 248757tic ultra-conserved element locus
            uce-7211, sequence.
ACCESSION   KCPA01002261
VERSION     KCPA01002261.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 446)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 446)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="248757tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>446
                     /note="ultra-conserved element locus uce-7211"
BASE COUNT          106 a          113 c           92 g          135 t
ORIGIN      
        1 tggtgtaaga gtgggtctct ctgtcttatt aaatctattt ttcaagctgt cacttaagca
       61 ggtctagtga cagagtcgga tgtttatgtg gccctggaca cttgaactct ggtgttttca
      121 atcacaacag caccttttgc cagccggtct gaattaaaaa ctccccctga ccttttaccc
      181 ccggccctct taaattcatg ctttaaaaac agcttaatga ggggtttact ggcccaattg
      241 gaagttttta ttaaaaccta ttagtgagct ggagtagcct gcctgaagga aacgattaag
      301 agcagctcgg ctcagagctg gcccttagcc atttccctaa actgcttcca gacccacgtt
      361 aaccccaacg ctgcagcctg caggaattca tatcctctgc tttaatttat ggcttgtctg
      421 attccctgcc cagttaggcc tgcatt
//
LOCUS       KCPA01002262             532 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 248868tic ultra-conserved element locus
            uce-3426, sequence.
ACCESSION   KCPA01002262
VERSION     KCPA01002262.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 532)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 532)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="248868tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>532
                     /note="ultra-conserved element locus uce-3426"
BASE COUNT          138 a          111 c          132 g          151 t
ORIGIN      
        1 gggatgctaa attttataat gtttctcatc ttgatccgat gagtacccga accaaaccca
       61 gaagaaaaca aaggtattct tgacgactac ttggaaagag gaaaaggttc aagtgcttct
      121 tgtgaatctg cccgggaacc cttagcagac aggcctgtgt cctttccttt gatgacggta
      181 acaagttcta tgacattgcc actttgagtt cttgcttcat tagattgggt gactgtttat
      241 ttgaaattgt aatgaaatat ttactttata gagctataag gattagcggc gataattgag
      301 tgaggctgat ccggagcttt cagtgtaata gggccccctt gtttgaatac agagcgcggc
      361 gagaatggag gggcgaggga gcgcgtttct gcctgtcact ttccctctac atgttgcttt
      421 ttctcccgga gataagtggg cctaatgctg aacaaatacg ggaaatcggg agccactgag
      481 aatcattcgc ctctcgcttt cccatggcag cgtgatagac gcccgctcaa aa
//
LOCUS       KCPA01002263             604 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 248974tic ultra-conserved element locus
            uce-5265, sequence.
ACCESSION   KCPA01002263
VERSION     KCPA01002263.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 604)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 604)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..604
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="248974tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>604
                     /note="ultra-conserved element locus uce-5265"
BASE COUNT          155 a          173 c          130 g          146 t
ORIGIN      
        1 aagggttccc ccccgcctct ctgtcctctc catcactcct gaagggttta cccactgtat
       61 catcccaccg tttcatggcg gcaactggtc cagatgtata ctcccaccag ttctgtacct
      121 cacagaggaa ggtgaagatg ccctgatgtt ccttgaggag cttggcaatt gtgaggctgc
      181 tctgcttgat cccacctagt gggtcaaaga ggaggtcacg gttgagggtc cccttcctct
      241 cctccgtcca cacgtcgatc tcttcctggt ggtacgcgaa ggtgcagtta tccccgtact
      301 tacagtcctg cttgttaagc atatctacaa agcaacaaac agcacacagg cagggtggcc
      361 cagtcagaaa ccaaactctc tctctcccac tgcccacaca cggaactaga gagcaaaaag
      421 aaaaaggaaa agaaagttca ccttcaaggc attcaagtta atgcaaacta caatgctggt
      481 attggggaaa ccatttcaaa acgctttaat tcagtgcctg gccagagtca gatcatgact
      541 taactaaccc cgccagtaca gattaagttc tcccataggc ccagcagttt ttagcttggc
      601 tctt
//
LOCUS       KCPA01002264             448 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 249080tic ultra-conserved element locus
            uce-6239, sequence.
ACCESSION   KCPA01002264
VERSION     KCPA01002264.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 448)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 448)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="249080tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>448
                     /note="ultra-conserved element locus uce-6239"
BASE COUNT          162 a           56 c          131 g           99 t
ORIGIN      
        1 agtaataata aaaccagacc taatgggtca ccatatgtgg agaggagctc tcttgggtct
       61 taggatatac acttagagag tgaagtaaag aaaaggaaaa aagcagtaat attggcaact
      121 gttgttaggt agtataaaca atagccagcc attggcttgg agcagaggat caagttccaa
      181 tagcactcaa tagggagcct tccttaaaaa attagaagaa gctgggttgg agctggtcca
      241 tgctgggaat ggcagaagaa gcaaaaacaa gagtaaatga atggaaatta agcagcagga
      301 aatggggatt tggcacaagg ttggaatttg aaactgcaga gaggtgtcag tgataaaggt
      361 tggatagagt ttctggccga atgcagatgt gttcattgaa taaagtacag atgtagaaac
      421 agggggggct gatggggaga gagaaata
//
LOCUS       KCPA01002265             616 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 249188tic ultra-conserved element locus
            uce-746, sequence.
ACCESSION   KCPA01002265
VERSION     KCPA01002265.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 616)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 616)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="249188tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>616
                     /note="ultra-conserved element locus uce-746"
BASE COUNT          213 a           95 c           97 g          211 t
ORIGIN      
        1 taaaaggctc atattaaacg ttgtgcaatt tcttttaaaa caaaatggtt taaacctact
       61 cacagtagat ataaatgctg tttaaatatc caaatggtat ggatctgctt gagtgccaca
      121 ttaaatcaaa ataaaaaaat ggtttaaaat agctaatgaa ttttctggaa aaagatgtga
      181 ctagttttca ccttgttgag cattttttca ctagtgcaac tttggaattt ttatgagaat
      241 tttggtacgt taatgaccac ctcgctccgt gctggaagca ataaacacaa agcttttaaa
      301 gactttctga cttgactaat tgaggtcgct ttcgtcagag gcagaggatg tgtaaccctt
      361 aaaacggtct tcatttgcaa aggtaaataa atcaaataag attttaatct cacttaagtt
      421 atctttttta gatgtaggag agacttgtga ggacacctaa attctcattt taaaacgttt
      481 aatttgtatt agtcatctaa aaagccttag cttagctagt taaatttgga caaactattc
      541 cctattaaac aactgtaaaa cctcataacc aatagtttgt aatatattat tttccataaa
      601 ttctagattg caaatg
//
LOCUS       KCPA01002266             560 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 249297tic ultra-conserved element locus
            uce-3452, sequence.
ACCESSION   KCPA01002266
VERSION     KCPA01002266.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 560)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 560)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..560
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="249297tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>560
                     /note="ultra-conserved element locus uce-3452"
BASE COUNT          172 a           90 c           93 g          205 t
ORIGIN      
        1 gtgtatcttg gtaggtaaaa taaagcattt catattgggg gtatcaagac cctttctttt
       61 taatgtaagg ccttaaaatt caaagccatt tctgcatctt gagtcagttt aaaacatatt
      121 taaaaattca tatagttcaa atttctttgc cttgcacagg ccataaggta ctggtgtggt
      181 gggtcagttt tgacactgaa aaatgaatcc agttagagaa cctcctgaag gctgttgatg
      241 atcgctataa taaatagtgc acactttaag tcaaactttt tcattctgta ttcaaaggta
      301 atggattttt cgtaaccata gtaaccttag tgtatttctg gataaataca tgaggtatat
      361 acattctggt tttatttttg aatataaact accacattat gtattactaa taatatgaaa
      421 aataggatat aggttagcat aatgacagct caaactagtg tgcatttttc ttctgcaata
      481 aatatttatc aaaagtgtag gttcaattaa tttctccccc atctccccag ttttctggtt
      541 ttcttgctgt gccatttatc
//
LOCUS       KCPA01002267             471 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 249404tic ultra-conserved element locus
            uce-5084, sequence.
ACCESSION   KCPA01002267
VERSION     KCPA01002267.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 471)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 471)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="249404tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>471
                     /note="ultra-conserved element locus uce-5084"
BASE COUNT          140 a           88 c           84 g          159 t
ORIGIN      
        1 gagagcatga gattgcaaac agctacccac catcataaag gatgatgccc ttctgtcaaa
       61 cttatatgtg attcaagtcc aaacaacgtg gcattatggg taatggatac tataattaaa
      121 atgttttact gggtgttttt agtaatggct ttgttctaca tgaagataaa agctccctaa
      181 caaaggaatt aatgtattgc tttaataggc tgcaccctga gttaagtttg aaaatttatg
      241 agttctctgc agcattgttc tttaaacaat ggcattgtca aatgcaacca gtgagaagat
      301 taaagttctc ccagcagatt aagtacaaat tatctgtcct cctgtttcag catcatttgt
      361 tcatttatca cataacgcct agtatttctg gtcagtgtca atatgctctg catccttgca
      421 gttaacagat gtcttctctt gtcgaatgaa ttactttatg tttcacgcac t
//
LOCUS       KCPA01002268             709 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 249507tic ultra-conserved element locus
            uce-972, sequence.
ACCESSION   KCPA01002268
VERSION     KCPA01002268.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 709)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 709)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="249507tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>709
                     /note="ultra-conserved element locus uce-972"
BASE COUNT          187 a          128 c          147 g          247 t
ORIGIN      
        1 acatatccta ccttctttta tcttcttgca ctacatgtat ctggtagagt ctgctctgtt
       61 aataataatg ctgaatatgt aaatcccctc agtttttata accagtgctt taggttgcat
      121 ttactgtaaa caaagatgta tttttggggg ctgttggttt gagtttattg tttatgtaaa
      181 tctctcagaa tgtgacatag ccagatagct tcctatgttg tgctgatcca cattttaggc
      241 cagcagccaa agtattttat cttttacttc attatagtga tcttccaatt agctgtggtc
      301 tgtaataccc tgattttggt ggcagtggtt tggggaggat tgtttgatag ttctgctcga
      361 gaggcaaaat gaggggcctt attatagaaa gtgcagaggt tgtgcagtag ctgagttctg
      421 ttgcaaagtt tgccgataag ggaaaactgg cccttgagca tccattctat tctgtatatt
      481 aacacttcta atctgcactg ctgataaaac tgcaagccat ttgcctttgg aggaattagt
      541 tctgcctcac ttgtgtaacc aggcgatggt gattaacctt taaactgtcc aatattctca
      601 gcagactcct gctccagatt agaaactatt tagttatgac caactaaatt aacaacattc
      661 cctcctctga agaataagat ttggaaggta tgcattttaa ggtggaatg
//
LOCUS       KCPA01002269             428 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 249609tic ultra-conserved element locus
            uce-1155, sequence.
ACCESSION   KCPA01002269
VERSION     KCPA01002269.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 428)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 428)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="249609tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>428
                     /note="ultra-conserved element locus uce-1155"
BASE COUNT          152 a           63 c           78 g          135 t
ORIGIN      
        1 gggggtttaa tgaattccaa cacaaaaatt cctagtgtgg ttgtactaac agaaagttgc
       61 tttaaaagga ctattttcct ctacagggat ttcagtaaag agacaatgtt tattttttca
      121 gtggaaaatt gattgtaact aagaggatac ttggcttgaa agtggggaat tatcatatca
      181 tatgattaaa tgaaagctta ccttgttata aggtaactag acatatccca atagaattga
      241 gacaatgttt gattaagcca gattttccta ctttaaattc aaggaacaaa ttaaagaata
      301 attgagatcc ttttcagatc ttttataagc tgaatatata aagctgcagc tccaggtggc
      361 aaagcaatta gctgatgaat aaaatcaacc acgctgtcat tcgtcagatg tttaaattcc
      421 ataagcca
//
LOCUS       KCPA01002270             726 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 249721tic ultra-conserved element locus
            uce-1588, sequence.
ACCESSION   KCPA01002270
VERSION     KCPA01002270.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 726)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 726)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..726
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="249721tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>726
                     /note="ultra-conserved element locus uce-1588"
BASE COUNT          198 a          182 c          170 g          176 t
ORIGIN      
        1 gcggtttaat ggagagggat gggtgtgggg acacgtggga gcggagggtg acacctcgct
       61 cggggcagtg tggagctggg gattcctggt ccccagggac ccggagcagc cccagcaccc
      121 catgctcctt ctgcatgtcc tggcccccac acaccctggg acctgccaga gcccagccca
      181 ggtccctgga aacagaaggc acggaattga gatttgcaga tctgataatg agccagttaa
      241 tgacataaat gatacctcaa gaacctcact aaaccatcca ggtcctacaa tttaatctgt
      301 aataaatact cctgcatcat tgcgagatgg ctgctcataa tggcaaatga aatatgctgg
      361 tatgataggt acaataaatc tggattttcc tatggttccc tcaggctaga acaatatgta
      421 accagagtgc gcactgtcag gatgagcaga tctcaaagcc atcataaaat ctaaatgggg
      481 actaattagg aggcccttcc cttctagagt tactatttct attgacattt tccatgcatg
      541 agcccctcca taacatcata agtcaccaag ataagaactc cctagattat agggaaaaag
      601 ctttaatgga gaagttgaac tcaaaggcga tgcataaatt ttccttctga taccccggga
      661 agtctgtgtt cagtactttc tttacaaact ttcctcccca gtgccagctg ctgctcggtc
      721 cggccc
//
LOCUS       KCPA01002271             586 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 249831tic ultra-conserved element locus
            uce-6400, sequence.
ACCESSION   KCPA01002271
VERSION     KCPA01002271.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 586)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 586)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..586
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="249831tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>586
                     /note="ultra-conserved element locus uce-6400"
BASE COUNT          168 a          141 c          119 g          158 t
ORIGIN      
        1 gttcagacca gctcatctgt tgactttggc agaaatcctt aatctcactg tgtgtagctg
       61 ccacttgaga actggggact cggcatagag ccgaagcagg gtgggatgca gggttggtca
      121 aggcatgaac acataggcct gcttcatttc aacagccgta cactgcattt tacagccctg
      181 aaattaaatg aggacctctc atgagccact gcgctccagg cataagaaat tgtaatgtct
      241 ggcttccaga aactgtcccg tcaaaatgtg cttctgatta ggtggcttaa ttacagctgt
      301 gaaaacaatg ttgatttagg cctcaagatt ccagtgcatg tcagccgtta ttagctagcc
      361 ttggactgaa gccaccattt taaaactctg taccactaaa gtcacacact gcctgacaac
      421 tttttattta ggcagaaatg ttgccagaag caacacattt tatgcaaaat atttttcact
      481 gcacaaattt caaatgtgac acagttgatg gacataaaaa tgggtggacc tcaccaagtc
      541 caaaacctaa gttttgcccc aacatgtcct cctcccccat ttcaac
//
LOCUS       KCPA01002272             589 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 249941tic ultra-conserved element locus
            uce-610, sequence.
ACCESSION   KCPA01002272
VERSION     KCPA01002272.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 589)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 589)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="249941tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>589
                     /note="ultra-conserved element locus uce-610"
BASE COUNT          179 a           96 c           91 g          223 t
ORIGIN      
        1 aactcaaggt acttctgcac aaaaacactt tgtagtaaac tttcagacca ttacacaatt
       61 tcacacaggg cacctttgaa aataaattgt tttgcatact gttcgtggct ttctctactt
      121 acacttttag gggaattcca gaacattttg caattagcta aggattatat ttccttattt
      181 ttattaattt tatgtaaagt gggatttatc agtggagcat tcattgacac tgacttcaat
      241 ttattctgat gaaactgact gacatctgtg tgtgctgttc atcagtcata atttaaacca
      301 ttcttaattg cattaaatgt aaattaagac attcaatttc agccattatt tttcataaaa
      361 cactgtgaac tgaattttag tgggtcacga gatcttacat tcaaaataaa tagggtaaat
      421 ttgaaactta ccattgatgt tcatatttca ccctttgtcg gctgtatttc ttttgtagct
      481 tactagattg gaacaattaa ttttctctct gaagggaaca tgaatggcta aagatgatgt
      541 agctgagttt tttaacaaat tactttatca tttctagagc ttgcttgtt
//
LOCUS       KCPA01002273             275 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 250042tic ultra-conserved element locus
            uce-5862, sequence.
ACCESSION   KCPA01002273
VERSION     KCPA01002273.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 275)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 275)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="250042tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>275
                     /note="ultra-conserved element locus uce-5862"
BASE COUNT           89 a           36 c           47 g          103 t
ORIGIN      
        1 tatattaaaa ttaacatttt ttaataacaa aaagtgatat agtccagtgg agtaggacta
       61 aatttatctt atgattgtac ttgtcatggc tttgagtatt tattgagtag ttttaaaagt
      121 tcattaaact caagagatta aatattgccc cgagcagtgc tccataaaag aaaaaatatc
      181 gtgctattac ttggtaaaat gttgtgctat gttgttaatt taactgttct catcttagaa
      241 gacatttcgc tggatgtgac attttccgtg actct
//
LOCUS       KCPA01002274             523 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 250146tic ultra-conserved element locus
            uce-6618, sequence.
ACCESSION   KCPA01002274
VERSION     KCPA01002274.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 523)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 523)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="250146tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>523
                     /note="ultra-conserved element locus uce-6618"
BASE COUNT          161 a          104 c          112 g          146 t
ORIGIN      
        1 agctcacacc ttgctcctct gaatttcctt acaggaaata aaacgatgct ctagacccaa
       61 ggctatcaat cataaaattt ccagcttcca ctttagaatg tttgggagct acaaatctag
      121 aaagacaaat tagttacaac atctattcaa attaatataa agtccattca cttgccatag
      181 tttaaatccc ctcaaagcaa gtcatgaagt gtaggaaaaa gcctgacctg cgaggcaagg
      241 gtgatgcttg gctgagactg caggaggttg gcttggcttt gctgaggtag ttgcgttaag
      301 agattctgcg cttgcaggag acctggagag agaaaagtgt gcgtttggtt tgtcattaaa
      361 aacactaaat caggtaaaac aaggctcttg acaaatgatg gaaagttaag agatgttagc
      421 ttttgtttca tccttgcata ggtatctcca gacttttttc agcccaaaat catttccctg
      481 agggtgacag aaaagtctcc tctgcaggca ggaaccattt act
//
LOCUS       KCPA01002275             570 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 250256tic ultra-conserved element locus
            uce-3652, sequence.
ACCESSION   KCPA01002275
VERSION     KCPA01002275.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 570)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 570)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="250256tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>570
                     /note="ultra-conserved element locus uce-3652"
BASE COUNT          154 a          116 c          113 g          187 t
ORIGIN      
        1 ccctcatggt tcatttcatc ttttccttat tcttgtcttc tttgttccct cttaccttct
       61 cttctactcc ttctggttga ttctccattc cttcattcct ctcttctctc atttatttgt
      121 ttagagcaaa ttttcaaatc tataaaccca ttacagcaaa gagactgtgt tgaggcagcc
      181 tctgagcctg cagatgtggt gggtcctgga ttccaataac agaacttatt tggcattatc
      241 tgtaatgtgg aaatggtttg gcttgaggct aaaatttatc atcattaccc taatatcatc
      301 tcaagcctca gctctggcag cagctaaaga aaacaccaag gcttaattca gtcagtgcaa
      361 ggaaagagag acagaggatg gaaaatatga tttatgatgg aaatcaatgc aatcataata
      421 ctttatgctt gtaaaattgg gctgttccaa cagtgctcac agattgtata ggcagctctc
      481 caccaatcat ggcaagatag aatgcagtag tatgatggtg cagctggcac aaagggttta
      541 gagtgtgaat gggaacaggt tttgtttgct
//
LOCUS       KCPA01002276             662 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 250366tic ultra-conserved element locus
            uce-5410, sequence.
ACCESSION   KCPA01002276
VERSION     KCPA01002276.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 662)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 662)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..662
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="250366tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>662
                     /note="ultra-conserved element locus uce-5410"
BASE COUNT          191 a          137 c          140 g          194 t
ORIGIN      
        1 aagatgaatt gccatcactt ctctgctaca ttttgtcagt ttgggtgcag ccgagtcaat
       61 accttcacct tgacacggaa acttcgtgat ttatcagtgg tgctgtgact cagtgctacc
      121 acaacctggc gaggtgcagc cactcatggc actgagcttt ggtcacagct acttggaaaa
      181 aaataaagca ctctctgatg atagacaaat gtgtcttgtt agcaacagcc aaaaagcgct
      241 tgacttgtac taataacaaa aaggccatgt tggtcaccat gggtctaaag acgaagcacc
      301 ctgtcactgc cttggttggg aaattagcaa ataatgttcc ttttccttga taaatgggtg
      361 acagttctct ctcaccaatc attttttaac attttgatgc atgtctatga tcccgctgga
      421 ggaacagaaa agtttactgg ccctcaattt tccgatgatg aatggaacac tctaaatgtg
      481 cgatttctgt atgaggtata gttcatttta agcaattcta gtaaatgggt gtcactgatt
      541 aggacaaata gtctacttgt gcaatagcac aaatggtatg tctcattctt ctggcctcct
      601 ttgagacaga aaagaaaggg gacagcaatg accctgataa acctggaatt gctactgttt
      661 aa
//
LOCUS       KCPA01002277             570 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 250474tic ultra-conserved element locus
            uce-6228, sequence.
ACCESSION   KCPA01002277
VERSION     KCPA01002277.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 570)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 570)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="250474tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>570
                     /note="ultra-conserved element locus uce-6228"
BASE COUNT          115 a          187 c          115 g          153 t
ORIGIN      
        1 ggtggtggga cagcgcctct cgcttccctg ctctcctccc gctctccctc tcctttaatg
       61 ttggccacct ccgctcgcct gaacttggac cttcagcagc gacaatttct ctggcctcga
      121 cagcaggatt aatttctcct gccctcggcg gggcctccga gtgcggtgga agtccagctg
      181 gcctgctgct gataagatgt accttttgat ttgttttgtc tttgattgcc ttttctgtca
      241 cctacaatgg ctggccgcct ggagacctcc acatcgcctg actgacggat ctatttatct
      301 ataggcccca gcttctcctc cccctcgctc ccctcctccc ccaaaccacc accttgtacc
      361 actgaagtcc cagtctaata gaagccgtga aggctcatcc accataaaat acatctgcca
      421 tcctccttct ccccaagata aaagcctgtc agtgttactt tccaattcca ggcagcttga
      481 ttaatggtga aaagccactg caagatcgac ttctggtttt tacaagcgct gtcagccagc
      541 ccagggttat gcgaaacaca ctcatagaaa
//
LOCUS       KCPA01002278             655 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 250588tic ultra-conserved element locus
            uce-4882, sequence.
ACCESSION   KCPA01002278
VERSION     KCPA01002278.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 655)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 655)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..655
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="250588tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>655
                     /note="ultra-conserved element locus uce-4882"
BASE COUNT          199 a          142 c          117 g          197 t
ORIGIN      
        1 tggcgaattg cttgatatat ttgccacatt aaagcaaact tgtgtttaaa cacagtctgc
       61 ttatcatatt tacagaataa aaatatgacc tttaaaataa aagagctcac atctcctccc
      121 tctgtgtttt taattaaaac catgaaccaa cacatgtatc catccttcct tctgtaatag
      181 cttgggattc cactctcaaa tactacacag ataaaacgaa catttatgtg ttagcgattc
      241 gcagtgcagt aaattctcct ttccaaacct gccgtcttca ttaaaatctt atttgctttg
      301 taatctcctt tgatcgctaa agttataaga agccccctcc tcttcttttg atactatcag
      361 tgtagctttt gaccagagag cgtgatgaat taaatgtatg acagatatga caggtgagga
      421 gtgcttggag agggcttaaa cagcagggat aagacaaagc ccccatttaa gaacaaaacc
      481 cctacccgat ggctagcccg ttaatgacca accactctat ttgtcctggt ggatgaggag
      541 caagctgata ctacagacaa agctttgtta ggctgttctt caatcaggcc acacaaccaa
      601 ctaattgaaa tgcccagttt ttgatttgat atacaggcgg gcttgtaggt gtact
//
LOCUS       KCPA01002279             384 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 250695tic ultra-conserved element locus
            uce-6903, sequence.
ACCESSION   KCPA01002279
VERSION     KCPA01002279.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 384)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 384)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="250695tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>384
                     /note="ultra-conserved element locus uce-6903"
BASE COUNT          116 a           83 c           62 g          123 t
ORIGIN      
        1 agagtgaaca ccttggagtc atcaaagctt ttggtgctta tagctaatta atagccctaa
       61 tgatattttt ccaagtccat gaatacatta tgtttgcaat ccaaaaagcg ttagccccat
      121 tcaagggtac ttcaacatct gctcatttaa gggcaattaa tcattttgat atatggttta
      181 aaattgactg cttccaaggg actttttttt tgacaagaat aacaaagcaa tttgccagga
      241 gccatcttct ggacatgtta ttagcagagc cttcatctta aagagggtaa aaaaaaatcc
      301 tcagatttag gtacctgctt taaagggaac ccaacacctt ctctctacag cttgctttcc
      361 ttcctccaat tcttcatcca gctc
//
LOCUS       KCPA01002280             620 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 250801tic ultra-conserved element locus
            uce-6272, sequence.
ACCESSION   KCPA01002280
VERSION     KCPA01002280.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 620)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 620)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..620
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="250801tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>620
                     /note="ultra-conserved element locus uce-6272"
BASE COUNT          200 a          138 c           99 g          183 t
ORIGIN      
        1 tttcatctga tcaggatcaa agcctttccc ccctcctgat cactgggatt aaatcagcaa
       61 tgtcatttta cacttttaaa aactacactg ctaaagcaag atataaaagt gcagcaaggc
      121 ggatcataga gaccttagaa tcccctcaag actctctctc tccctctgca tttgctacag
      181 agcagctgtg cctcacacag attcaaaata ttaaggcaag aaaccaccca cttagtttat
      241 tttccatatg actttcctgt aattattttg taaactgttc acacaacaat atataaaaac
      301 atctgcaaaa acaggtaatt aatgtgtaac taatgcattt tttatggtgt ccatgcttcg
      361 tcaactgtaa ttataactct ttttaagcaa atgatgatgt gtttgttgca atgtgcaagt
      421 ggttatttta gatgctctgt ttactattac tgcaaacaga aaaaaactct acagctactt
      481 tgttgcacat ataagccttc atccacacaa gcacgctgct tttccaaagg tatcttaaaa
      541 gggaaattgg ctttggaaat gctgaccagg ccacccgctg accaaagtaa cagtaagcca
      601 ggacattaag acagcagcca
//
LOCUS       KCPA01002281             739 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 250913tic ultra-conserved element locus
            uce-6245, sequence.
ACCESSION   KCPA01002281
VERSION     KCPA01002281.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 739)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 739)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..739
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="250913tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>739
                     /note="ultra-conserved element locus uce-6245"
BASE COUNT          207 a          153 c          165 g          214 t
ORIGIN      
        1 aatggagagg cctccggtag tggtaaatgg aagacataac tatgaaactt atttggaata
       61 catttctagg acttctcagt ctgttccaga cgtaacagat cgaccaccac actccttgca
      121 ctccattcca gcagatagtc agcttgatag cacattccca ccacctgccc atgatgataa
      181 tgtatcaatg gcttcttctg gggccaccca agctgaactc atgaccttaa ccattgtgaa
      241 aggggcccag ggctttggct tcactatagc agacagtcct acaggacaga gggtgaagca
      301 aattctagac attcagggat gtcctggttt gtgtgaaggt gacctcattg ttgagatcaa
      361 ccagcagaat gtacagaacc tgagccatgc agaagtagtg gatatactta aagaatgtcc
      421 tgttggaagt gaaacttctt tgattatcca tagaggaggt aagtttggaa agtctgtaca
      481 attacaaaaa tgtgtgtaaa aggttctaaa ccataaatac tcactacatc cttgtttgct
      541 agattggcaa ttaatttcca tgttgtggga aggattctgg aagtgtgtct tatcctaggc
      601 acagtttgtt gtacattcct ttatgtgttt tgagtgtcaa tggtcccacc tctgtatcca
      661 gaccttttac cccataatag tttgtgtggt gtctgcagca aactcatgta gtcccagagc
      721 agtgctgcaa gatttagat
//
LOCUS       KCPA01002282             708 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 251023tic ultra-conserved element locus
            uce-27, sequence.
ACCESSION   KCPA01002282
VERSION     KCPA01002282.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 708)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 708)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..708
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="251023tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>708
                     /note="ultra-conserved element locus uce-27"
BASE COUNT          240 a          115 c          120 g          233 t
ORIGIN      
        1 tcggtttaca tcagaggttg ggggatagca gagttccact aaatctttta tttccctctt
       61 cagaaaacaa ttttcttagt attgttttca taaaagcttt caaatgccct aaaataatac
      121 agagatttta ttttgaacag gatttctcaa tatgtactgc atctcttggc atatctatta
      181 tattaactca agccttaatg atacaatggt taaaaacaga gtacagatgt gtataaatga
      241 aaaatgtaat agatttccct cttaatgtaa tagaattggc acgaggtatt ggaaacagga
      301 gtgaaagtag tcactcaagc attgtgtttg catgttattt aaatacaagt ggttgaggta
      361 taagtacctc taagtacacc tgaaagagat ggtgccttgt aatcattgtt tcagcatttg
      421 acagttgttt acacaacagc agcacattct ctactgattt gaataataaa catgtttaaa
      481 caccagctgg ataatagaag gataattgaa acatagttta aagctctgat ttacaggcat
      541 tgtggcaaca cttttatttg tggtacaatg ctatacttct gtgcagcctc ttgaaaaaat
      601 taaataggca ttgtttcaaa caactttggg atatatttaa ctcaattaat ctatcatgca
      661 tttgtgtgcc tgaacaaaga acacaccatc aaaacttcca aaagcctt
//
LOCUS       KCPA01002283             603 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 251122tic ultra-conserved element locus
            uce-2310, sequence.
ACCESSION   KCPA01002283
VERSION     KCPA01002283.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 603)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 603)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="251122tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>603
                     /note="ultra-conserved element locus uce-2310"
BASE COUNT          155 a          126 c          115 g          207 t
ORIGIN      
        1 agtttccaag ttggtattta gaggctattc cttgctacct ttcataaggc atttttatat
       61 ttacatttaa aatgccccac atatgtaaaa tgtccttaaa attctctcaa gggaactgac
      121 gtgctgtcca gtgcacccac gggctgatgt aaaagctcct ccaaatgttt ttttcctcag
      181 aagacttctt ccagaaatgc tgctctcggg ttctgctcct gcatgagaac aaagatcagt
      241 ccttcatggt cctaaaccca atgcatgtgc atgacttaaa ggcattacct accaataaat
      301 aggagattag ctgcggcttg tgtatttcct gatcagttca ggttttttca gatggctcgt
      361 tgttatcccg tttcctttaa cgatgggaca ctttaatgag tttgccatct gacatacatc
      421 tgcttcctgt taaacaatac cttcattctt ctggagctgc taaactcatc ttttatccta
      481 caagattttt aattggtgtc agcatattca tttgcgttgt tggaaatgaa tagcaaaacc
      541 tttgtgggag aacatggata ttatttgtgt aattaggggc tggtcagtcc agctcatgtt
      601 tga
//
LOCUS       KCPA01002284             602 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 251225tic ultra-conserved element locus
            uce-5634, sequence.
ACCESSION   KCPA01002284
VERSION     KCPA01002284.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 602)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 602)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..602
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="251225tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>602
                     /note="ultra-conserved element locus uce-5634"
BASE COUNT          148 a           98 c          124 g          232 t
ORIGIN      
        1 acttttctga ttcttaaaat ttttcatgtt attttgagca aagacagctt tttcttttat
       61 ataatttctc tgtctctttg ggtgcatttg gaaaggtgga ttaaactaca gttttattga
      121 aagcgattgg ctttcaagtc ggtagggttg tagttccttt caagattcag aggttaagac
      181 aaatcctttt cctgtccttt tatttagttt agatttttat ttctttgaag caaaatgggc
      241 aagtagattt tagagtatta gtagaatcat tatatcactg tcgttggtcc tggggttgcc
      301 aggccttttc tgattatcag atgcaacaaa tgacgtccaa ttttattgac cagtttggct
      361 tcaacgatga gaagtttgct gatcaagatg acattggcaa gtgagtataa agtcttgtga
      421 gttttctttt tggctggctg ataggagcat ttactgatca atcaatcctg tcttttgtgc
      481 attgatagag gcctccttga gaaagcaaca gcttctcttc taatctcgtg ttgagaacgc
      541 tgtgcctgaa ttgtaactct gctttttaaa gctgtgactc tccattgacc cattgtttgg
      601 at
//
LOCUS       KCPA01002285             743 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 251333tic ultra-conserved element locus
            uce-1762, sequence.
ACCESSION   KCPA01002285
VERSION     KCPA01002285.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 743)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 743)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..743
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="251333tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>743
                     /note="ultra-conserved element locus uce-1762"
BASE COUNT          234 a          133 c          136 g          240 t
ORIGIN      
        1 aaattcatat ttaaatttca aatgagctaa ataaacagtt tcattcagat aaacagctga
       61 ttttgttcct ctcatgttat attaatatta gtattatggg gttttctgca cccttgcttt
      121 acttcctgac tagctgataa ttgggttggc agagtatacc tggggtcatc ttgtttagct
      181 tatctgcacg agagaaagag tggcaaatat taagtgaaag cagcaaaaaa tgaaaggaag
      241 atttaatctt tgaccaattt gaaacatatc ctagagaatc catggagaaa aagataaagt
      301 gtgactatga gtaagttaac taaacacatt acagtatgtg agagcaaatg gagttagtcc
      361 attgtacacg tttaatttcc tattagtctc tggcgtttac tactccagtc tgagttgggg
      421 catctgtaaa ttcagttaaa tacagtgcat tgtctaaaca tatcacagct ccaatcagtc
      481 acccgggctg ctgataagaa gcctcttgta ttattgaatc tacaataggg aggctctgca
      541 ggcacaaaga taacagctag gtatttcact ttaagtatga gaaaacgcag tgactcgcct
      601 ttgctgctac agctctgaca tttattacta ctccctgatt tgttttatac tactgatgtg
      661 aatttggttt caagtgcttc gtatctcttt ttattcctaa cttaagacct ctatctgaaa
      721 aacaagcgaa ccaaaatcaa ctt
//
LOCUS       KCPA01002286             611 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 251442tic ultra-conserved element locus
            uce-5825, sequence.
ACCESSION   KCPA01002286
VERSION     KCPA01002286.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 611)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 611)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..611
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="251442tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>611
                     /note="ultra-conserved element locus uce-5825"
BASE COUNT          183 a          119 c           98 g          211 t
ORIGIN      
        1 aaaatattat cagagtattt cactaagaag aataacttcc agacaatgac atctgcagct
       61 cgacattttc atgaaatgtc tatacttaac aaaaacatta cttcattttc gtggtatttc
      121 ttttgtgcct aggagcaacc ctgtaattgt tcacttcaat tacaacatta ctattttata
      181 ctgaaaccca ttttatctgc atgccagctt tttatttgtt ttaccaacta tatctatttc
      241 cattactgca aggctgatgg tttgtctcaa gaggaaatca aatccattaa ttcagaaatt
      301 tcaagcacgg ctgcctctgc cataagcagc atttcttatg ctaatagcaa atgtgctgag
      361 actgaaaaga actgacacag ctctgttttt tatcataact taagcattta tgtaaaaagg
      421 caaatccaat agtactagga aactataagt gttattatat ataattcact ttactgagaa
      481 ctgcatgcag cctggtttgt gcaactgtgt cttaaatcat gctgtttgtg gttttaactc
      541 gcttgacgtt tggggtctgc ttttgatcct gggtacctca gtgaaaatct gccattgctc
      601 atctagcagc a
//
LOCUS       KCPA01002287             829 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 251555tic ultra-conserved element locus
            uce-1732, sequence.
ACCESSION   KCPA01002287
VERSION     KCPA01002287.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 829)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 829)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..829
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="251555tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>829
                     /note="ultra-conserved element locus uce-1732"
BASE COUNT          271 a          137 c          200 g          221 t
ORIGIN      
        1 ggatgctcct gatgcactga tctagaagag acatgagcaa agtagaaaca atgacatttc
       61 gctactgtat gaattccctc tcccttcact taatcctgtt cttactgggg ccctgtgctg
      121 aaagctgata attttgatgg cccctgaata aagccggtag cttgaattcc tgccaccagc
      181 ccccgtataa tgaattgggc taatgaatgc tagtaagtgg taggaatctg tgaccagctg
      241 catcaaggca ggtaatacag ctcagattta attgggagca ggtattggaa ggctgtatta
      301 ctttaattgg tgagggggtt ttataaatgg aagggacaaa gtataatgga caaattgtgc
      361 tgtacaatag cacttaagcc gggattgtat gcattcgtta atctgttgag gaatgaggca
      421 attctaaaca attttctcag tgaaaccaac tccagaaagc ttgtcccttt tgttctccct
      481 tgggaaaatg caagattgaa acagaaaata cctttaccga ggcaatcatt tgccacgtgt
      541 ggaaagcgga tacagctgta aactatgaaa gagggatctt tgtagtacaa taaaggatgg
      601 aaaaagagat aaagctgggg ataagagtgg gcctgtcact gcatccaaag aaggaataaa
      661 gtgatgacat ttacagtgac agatgagact gtaaagagaa ctcaggacaa tttagagagg
      721 gaaatttgat atttaaaaga aagggctctg ataattaaaa gtagcattac attaaactgt
      781 tacgcatgtc attagtgaca gaagggaact ggtgcctttt gaaaagtta
//
LOCUS       KCPA01002288             485 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 251663tic ultra-conserved element locus
            uce-1211, sequence.
ACCESSION   KCPA01002288
VERSION     KCPA01002288.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 485)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 485)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..485
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="251663tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>485
                     /note="ultra-conserved element locus uce-1211"
BASE COUNT          143 a          111 c           77 g          154 t
ORIGIN      
        1 tttttatgtt tcaacctcac tccttttcct cagactccag ttcccgtatt ttccttaaaa
       61 ccccaaatag tctaggtagc cacagaagtg attgttccta ccagtttctt ttcatcactt
      121 ctgcaattga ccaattgaca actgattgat ggttatcttt tcacttccac aatgaaagaa
      181 attaccatca ctatagctat gtacagtaaa tgcctccaga gtaaattaca tgattctaaa
      241 attctcctta gctcacttag taaaacatca acacaaaaag tttctttttt gcctctcttc
      301 ctgtactgca gatttggcct ttcctgtcag cttcagaaaa gaacttgaca gcttctttaa
      361 aaagaggagt ataaaagaac ttgaataagg gatggcacag ggccgggcta aggcttccat
      421 tctctgcaag tggctattct ttgcactgtt aggcatgtga gcacagataa gccacataag
      481 aatac
//
LOCUS       KCPA01002289             763 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 251776tic ultra-conserved element locus
            uce-3982, sequence.
ACCESSION   KCPA01002289
VERSION     KCPA01002289.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 763)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 763)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..763
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="251776tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>763
                     /note="ultra-conserved element locus uce-3982"
BASE COUNT          254 a          168 c          147 g          194 t
ORIGIN      
        1 ccatactgtg caccacctaa aagtaaactc gtaacagcat aacattttat agctttattt
       61 atttgctaca cttactttct aatggagtgt gtgcaacatc atatttaaaa catgacctta
      121 gaaacttaaa aacacatcca tttctcccaa agaatataca gctgccagag aaaaggggac
      181 attcagtaaa ctgcatgtca ctatcagcta ttgatagcca gtgatttgtt ctgaatccaa
      241 aggctaaacc aaccctcatg ctgctgtatg tcagatgcaa ttggtccaaa gtcaaagttt
      301 tacagctcag acagggcgca ctttatcctt caggctgcta cttaagatag ccatgaccct
      361 gaggagaacc agtcaacaaa acagacagac aagaggatgt gatttgtatg catccctgag
      421 cctgctcaaa tcacctctga ccttcaggtc aggctgcaaa tgacagcaga gtgcatgcac
      481 ctgatcagac agcacattct cattagaaag cctgggaaaa gggggcagct acactgtgtt
      541 tactcataga ccaaatgcaa tctacccagg aaatgagaag aaaaaagatc aatttagctc
      601 aacagaagga tgtgagcaac atgtaagtat gttatgaaat tccatatcaa actgcttatt
      661 cttataaacc cagatggagc tctctgcctg ggtgagtcac caagaagaca ggttagcaat
      721 gggtatttat ttgctgcaga ataccatgcc aagagacttt act
//
LOCUS       KCPA01002290             511 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 251994tic ultra-conserved element locus
            uce-6316, sequence.
ACCESSION   KCPA01002290
VERSION     KCPA01002290.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 511)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 511)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="251994tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>511
                     /note="ultra-conserved element locus uce-6316"
BASE COUNT          180 a           84 c           76 g          171 t
ORIGIN      
        1 aaggttaaaa agcagtttgg tttgaaattt tctgaaggaa tcacagtaaa caaaatctgt
       61 ttgcctaagg aaaccctagt agcaatcagc cagtaacaca actgcttgtg ctaatgaacc
      121 caaagctgtt aatgtggttt cttcagttaa attgattcat gaattttgaa gagaacatta
      181 tctaatgaat tttctttgaa tagaaagcaa ttaaaaggac aaatcagtct gattaacccc
      241 aaagtcaccc tactgccaca aatggtgtac agtttgaaat tatatcataa aaaactagag
      301 cagatttgct atctctttgc cctctactaa tccatgtaaa ttaatgaaca acaaagttaa
      361 tttctttgat gacccttttc tcgtatcacc tggattatgc tgatgtttaa tttgcttaat
      421 gttataataa agactaaaca gattttttca atgaagtgat tatcattcct ttcagttaag
      481 aagtgatttt tattatttaa cacacacata a
//
LOCUS       KCPA01002291             559 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 252100tic ultra-conserved element locus
            uce-6601, sequence.
ACCESSION   KCPA01002291
VERSION     KCPA01002291.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 559)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 559)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="252100tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>559
                     /note="ultra-conserved element locus uce-6601"
BASE COUNT          177 a          110 c           89 g          183 t
ORIGIN      
        1 aaataaaaag gagaatactg gcacacttaa tctttcttat acccaatcat ccagtacagt
       61 ttatcaactg ctttatgact ggcactagtg cacagattga agaattccaa gattactata
      121 tatataaatc tagcaactgc attaggcata agctccctgg ccttctaata ctaagcaaag
      181 ctatactgac aagaaaagta aaccaaaaag acctgacaac aattattctg aacacttgct
      241 aaatgtcatc attaaagcac tctcgtgatt aaacaaagca gaagtgagga aagaagacaa
      301 gattgtgttt gcgctaacta caattagttc caaaatttta tacatgttaa atgttttgtt
      361 atctattctg ttatcaaaca aactttaaat tctgtcttcc aatttgttcc tctcaacatc
      421 aactttgttt tatttgtatg ccccatttca tttattttta agaggagtct cagctgtttg
      481 ggacctgagg ttgatttgct ttgaggcttc gtagtgctct tctcgcagct gcagatttgg
      541 caatcctgta gcttctgcc
//
LOCUS       KCPA01002292             422 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 252205tic ultra-conserved element locus
            uce-5970, sequence.
ACCESSION   KCPA01002292
VERSION     KCPA01002292.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 422)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 422)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="252205tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>422
                     /note="ultra-conserved element locus uce-5970"
BASE COUNT          114 a           91 c           85 g          132 t
ORIGIN      
        1 ggcagggaat ctttgctact gtgtgaatgt tgatggcaaa tattttaatg aggcccgcct
       61 tgggtttaag ttgattgtaa atcagtaaaa tgtgctgggc tttctaagct ccgagttggc
      121 aacagcttgt tgagagtaaa tcctctcatg gaaggttttg ctaatctgaa taaattcaat
      181 ttcaaaatcc ttccttgatc taagcttgct taagctctca ccaaggccta aggaccctga
      241 gggtcaattc caataacaaa agataagaaa aatctgccct ttctcatatc tctttgcaat
      301 gcactataag ctgttacctc actgcaaaaa atctttggct ttaatgaagt cgccttttga
      361 tttgttgagg atgaagttca atgtttccca ccctggtgcc tgcctctgcc acccagcacc
      421 ag
//
LOCUS       KCPA01002293             533 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 252313tic ultra-conserved element locus
            uce-6317, sequence.
ACCESSION   KCPA01002293
VERSION     KCPA01002293.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 533)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 533)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..533
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="252313tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>533
                     /note="ultra-conserved element locus uce-6317"
BASE COUNT          157 a          101 c          115 g          160 t
ORIGIN      
        1 ttgcgcgcgg cgggtgccag cagaacccga tacggtgcga tctatagaag caaggtacaa
       61 ctggaataat gaaacccttt ttaaaggctg gttgtaacag tcctgctggg tattgtaaat
      121 gcctcaggtg cacttgatac tgctgttacg ttcctggccc tggctcctaa tttttatgga
      181 aagatggatt gaacttcaat ttaggaatat tcggtaatcc ctctcaggac atactgtaac
      241 agctggtatt tctgtgttgc agcaaatcga ttccatacag cagtcagcaa tgcctatggc
      301 tgggctccgg caaaaacttc caaagcattt taaataaagt gggccaaaga aaatagcatc
      361 atcactgcaa aaatgtagct taatttgcac gtcaggccat ctcattccag caaaatatta
      421 agcattttac tggtaaggat ttcatcaggt catttatttt tcattaatat atatttagga
      481 tctgggggga ataactttat gtatataagt ttcttaaata atgaggagct tga
//
LOCUS       KCPA01002294             755 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 252422tic ultra-conserved element locus
            uce-6189, sequence.
ACCESSION   KCPA01002294
VERSION     KCPA01002294.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 755)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 755)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..755
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="252422tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>755
                     /note="ultra-conserved element locus uce-6189"
BASE COUNT          253 a          135 c          138 g          229 t
ORIGIN      
        1 aaaacaggcc acatgactag gcagcagaga acacattgtt tccagtctaa tccccgtcaa
       61 agacatatga cttgggactc tgaagtcaga atatctccat attttaaatt tccatgagca
      121 ctttcaagaa aagctggagt tttgctaaat gatttgctac acacttttca ctactgattg
      181 atagcaagaa gcggcattag cagtattttt cccccatcgt tcctctgaag ctaatggagt
      241 caaggattcg ttgcttgatc taatggcaat agctttccaa tagacatgca cagaatcatt
      301 gattagtttg tcctcttctt gtttgcgttg gaacactgtt caatttacac caattaaaga
      361 atgcttggtt tgtgtattga agaataatta agggatggaa ttccctatag gctactaaaa
      421 atgacatctg actagaatgg tgattacagc atgaagacag cattagtatt taaatagttt
      481 gactgctata taaaatcatt acagcacctc accatgaaaa agagcattag ttaattttgc
      541 ctataacaaa attagttgta tgtgtttgcc tggtcacttt aagtaaattt gacaaggcta
      601 atcttaaagc aagcgatcca ggtttggtag aaggagcaga tagagcgctg tttatcatct
      661 tgatagatat gtatataatc ttcaaccaaa atacaaacac acacaaatga gtaacaagag
      721 ctttgtcaga gatgctcaaa tcaaatgtaa acatt
//
LOCUS       KCPA01002295             716 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 252529tic ultra-conserved element locus
            uce-6329, sequence.
ACCESSION   KCPA01002295
VERSION     KCPA01002295.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 716)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 716)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="252529tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>716
                     /note="ultra-conserved element locus uce-6329"
BASE COUNT          250 a          143 c          143 g          180 t
ORIGIN      
        1 attatgcagt gcttctccta tgtaaactgc ttcgagagaa ggcaccgaaa tccatcggag
       61 tagtatagca tcctgttgtc tagcaaccaa gtgcaccaag aataattcct gcttatattc
      121 tgagatgtat aaatttcttc atgccactgc acatgaagca catacctttt gcccctctga
      181 gcacaaatcc aaatccttca ttgtcttttt tctgcaggac cactgccttt tcttctatta
      241 tgcagtcact gtagagagaa ttccgaggat agcgaccatt attacatccc ttcatcacca
      301 ctgtagtagc tgctcctcca gtgtgcaggt tcatcatcat cacagcccgt taatcaaata
      361 atattgcagt aaccaagcat gggaaaacat agaacaaata gcagcgaggg gaagacaaag
      421 actaagctgg atggtaaaag agaacatgac aaagcaactt aaaaggaata aaaaaggcag
      481 agaggaaaaa gaaagaagaa gaaatcatgc atggtggttt gtgttctata tgaatgactg
      541 gatgaacatg tgatcatgta atctgtgggc tagctaggac tctaaaagga aaaaaagtaa
      601 gtgaactgaa cgacagtatc attaataaac tcctcaatcg tggatgtacc agatgcatct
      661 tctagtgaag ccaaaatgaa accaaccaga agaaaaatga ggcagcattt taaatt
//
LOCUS       KCPA01002296             773 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 252640tic ultra-conserved element locus
            uce-962, sequence.
ACCESSION   KCPA01002296
VERSION     KCPA01002296.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 773)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 773)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..773
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="252640tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>773
                     /note="ultra-conserved element locus uce-962"
BASE COUNT          205 a          155 c          176 g          237 t
ORIGIN      
        1 gctttgtcaa gaggaacttg atgtgatgtg gaatgaacct tttttcaaaa gggagcaaaa
       61 aagttgattg agaagtgagt ttgtttctta aatggtgatt aagtaaagaa acatacagtg
      121 ctttacaggc catacaagag gaattccttg caaaattccg ttataaaaac atctacgcag
      181 aaaaggaaaa catcagctta aatcagtgac aagttacaag tttgctagca ctaacggaaa
      241 ctgtattcca tgatctaggg attgtgttaa ttaatgtggc tctcatctgt tgaaggtgtc
      301 gctcttcatt agcctgtatt ttacacactg ccgtgcttca tttttggaat gaggtggtga
      361 ggggataacc tagccagcca tccttgtttg atctctgtga tacatacgca atgcagaatg
      421 cctcagctct cttggttccc tgccctgtcc tgctaatccc agctgagctc attatggtgt
      481 agccttgctg ctactcctgg agccagagct gtccaagcta attactggta gcagcagagc
      541 tgcctgttaa gggtctggtg tggatctgct aacatggtcc ttggtagtga cctgcaaaaa
      601 gcacgaggga gttgctctct ttcttgctgt gcacagcctg tcctttgggt ttagtgctga
      661 tcccttcaca cagctctttc agctgtagta agtgtaaaac ttggtgaagg aaactcttac
      721 tttagaaaac atacagtttg ctgctttgat ctcataattc ataggctatt aca
//
LOCUS       KCPA01002297             433 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 252744tic ultra-conserved element locus
            uce-2987, sequence.
ACCESSION   KCPA01002297
VERSION     KCPA01002297.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 433)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 433)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="252744tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>433
                     /note="ultra-conserved element locus uce-2987"
BASE COUNT          159 a           63 c           67 g          144 t
ORIGIN      
        1 aaaaaaagaa aaaagtttga aatgctgcac ttacattttt caacaatttt caacaattac
       61 acaaaaattc acgcagaaat ggggaagttg gtctgttttg acagaaactg acaggaatca
      121 atcaaaacaa tcgaattttg aattgagtaa agtgcaattt cattggatag ctaaatatct
      181 ttgtaagata gagattgttg aaaattctat ttttgttttc caagtccttc caccccagga
      241 ctctaaatta ttggggtaaa aaacagcctt gcaagaaaaa ggggagctat ttttgctttt
      301 tatgtttttt attgttgaac ttgtatccct ttgaaactga aggaaaatta aaaacaaatc
      361 taatggtgct tttaccacaa tatgttaact acattaaatg ctaattaatc attttctgtt
      421 atcaaagcac ata
//
LOCUS       KCPA01002298             485 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 252851tic ultra-conserved element locus
            uce-6309, sequence.
ACCESSION   KCPA01002298
VERSION     KCPA01002298.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 485)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 485)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..485
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="252851tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>485
                     /note="ultra-conserved element locus uce-6309"
BASE COUNT          151 a           89 c          102 g          143 t
ORIGIN      
        1 tgtttgtctg atttagaaga tgatggaaag gaggtattta ttttcctcca cttcccaaac
       61 agtgatcgta cttacaaaat ttgctgagat tgtccaagaa agtgtgtaaa atcctcatcc
      121 atcagagccc ctggtcaggg aatgacagtg cagtaaatat cttcagcagc tgccttttaa
      181 tgtacaagct gttttcagta ggaattttca gcactcacat aaaacacact gtcatgagtg
      241 actgcctgtg ctccaaagtc attactattg ggatgatgga acatctttca gcgaataacc
      301 tttaaatgtc atgtcaagtg tgttgaaggc attttcaagc cttgctcaag gttacatgaa
      361 tattgagtag gcctgtaaaa agtttgagat ctatgagaga aaccactcat acactggttt
      421 ggaaaacagt cacttgatct ggaaggtggg agcaacagaa aagaaatctg tttaatactt
      481 gccaa
//
LOCUS       KCPA01002299             496 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 252960tic ultra-conserved element locus
            uce-7167, sequence.
ACCESSION   KCPA01002299
VERSION     KCPA01002299.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 496)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 496)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="252960tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>496
                     /note="ultra-conserved element locus uce-7167"
BASE COUNT          167 a           84 c           93 g          152 t
ORIGIN      
        1 tttatgcttg aaaaatctat tgctcattaa tcttcccggt ctaacaaaaa attgtcctgg
       61 cctccagtca ttgttcaaca taaaaaaaac tgacaaaggt tgattgtatt gtaattcagc
      121 attggagtaa caggttgtaa aaagggctat aagaatcaaa tgaaatatgt gtcagtctta
      181 cctttctatg tttctagact ctctgacccc agagatagaa gctgaccgca gcgggggcag
      241 aacagatgct gaaaggacaa tacaaggtag gaatttgcaa aaggctataa atctagatct
      301 tgctatatga gtttttcctc agctttagac tgctattcaa gcatgtagcc taccatctgg
      361 gccacatcaa aacaagttca aacaaggtca agttcatctt gcttgtttat aagagagaat
      421 gtgctgatag attttcttta aattaatagg tcatttctgt ttatacagag caattaaaga
      481 agaataatta atttga
//
LOCUS       KCPA01002300             600 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 253067tic ultra-conserved element locus
            uce-4992, sequence.
ACCESSION   KCPA01002300
VERSION     KCPA01002300.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 600)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 600)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..600
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="253067tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>600
                     /note="ultra-conserved element locus uce-4992"
BASE COUNT          190 a          117 c          104 g          189 t
ORIGIN      
        1 actcctaaaa tatgctgagt gagcttcagt ttctgagttt gtttctccct catatttcat
       61 gtggtacatt tctcaaacag ggaacctgct cattccctcc gtttaccagt atctgcctga
      121 taaagtagaa ctgaaaacac tgtgttgtgc tggaacgtga agaagttcag agttcaaaac
      181 aattgcttgc tacaaaaata aaggaaggcc tctcctatga aatctatgaa ctcaaaactg
      241 ggatacagaa ctaatcgttg ccaataactt taacttcatt tatctatatt tggcaaaaat
      301 tgtgctgcag ctggagatga aatgctgagc aaaataactg cagcgacatg agctccaaaa
      361 cagcaattac taagctgtgt tgacttgtgt aagattttac ttttatttat tgtatttaaa
      421 gaaactctgt atctatgtac agtacaacaa gaactgcctg atcaaataat gcctgattgc
      481 aaagcatctc agctccactg tcaattcagt gtttagcaag gaatttttca tgaagccaga
      541 ctacaatgct ttttatagtt ctacatactt ttatactgtc tctaactgca aggagtaact
//
LOCUS       KCPA01002301             323 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 253172tic ultra-conserved element locus
            uce-4779, sequence.
ACCESSION   KCPA01002301
VERSION     KCPA01002301.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 323)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 323)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="253172tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>323
                     /note="ultra-conserved element locus uce-4779"
BASE COUNT          107 a           56 c           56 g          104 t
ORIGIN      
        1 ttgtgagttt ggggtgaata tttgtgaaac attaagatga ccaccccagc actttccaaa
       61 aattgcaaac ttagttttcc attaacattt tctattttgg caccttaaaa agagtggaag
      121 ttgatttcag cagaacatcc tgtggggaaa ttagttcatt ttgctaaagt atcttaataa
      181 ttacagtgac atcaaggtta attgcttaat ctgtattgcc atagtgcagt cctgtagaaa
      241 tcccaacaca atctgttcta taattagtgc cagaataccc atatatagaa caagcagtgg
      301 ccctctgaaa tgattaataa ata
//
LOCUS       KCPA01002302             775 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 253282tic ultra-conserved element locus
            uce-3328, sequence.
ACCESSION   KCPA01002302
VERSION     KCPA01002302.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 775)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 775)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..775
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="253282tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>775
                     /note="ultra-conserved element locus uce-3328"
BASE COUNT          272 a          111 c          171 g          221 t
ORIGIN      
        1 gaagctgagt caacaaaact cattgcattt aaaatatact gccatgtggg tgttttctcc
       61 tgaaatgtta agagctgaaa agctagtgct tttatccaac atgccatcca aacaattact
      121 tgcttaaagc aaatgacatc tagatactgg aaagagataa agttaaaagt caattcatta
      181 aaaatacttt tctcctcaag aaatgatttg gtttttgaag taaattgaac ataaatggta
      241 ggaaggaaga agaaaaatgt gaaattttat cataccattt taagtttgat tatgtcaatg
      301 agaaagcaaa tggcaacaga gtataaagga atctaatcca taaaggaaga gaaaaaggtt
      361 aaagaagtca acagtaatta aatggtgatt gaagctgaaa gaaaattgat ctgtgttagc
      421 tgaaggccat tcttgccttt tgggatgtta tgcatcagtg aagaggggaa agaaaggttt
      481 ttcttgtttt gatatggaaa tatatgtcac atcttcttag cctatggtgc tgtgactcaa
      541 aactgcactg agtttctggt acactgatcc tagtgtccta ggcatgcttg tgggtattgt
      601 gtaaagataa gatgctctaa caaagctggg caaggtcaaa aggcatggga gcttcagcag
      661 tttgcatgtg gttttgtctt ggggcaaaaa ataaaagcag cctgaagcaa acgaatctaa
      721 ataggggtag aactgacaca tccatgcaaa agctgtgcaa tatccatgac ttggg
//
LOCUS       KCPA01002303             850 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 253394tic ultra-conserved element locus
            uce-318, sequence.
ACCESSION   KCPA01002303
VERSION     KCPA01002303.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 850)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 850)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..850
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="253394tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>850
                     /note="ultra-conserved element locus uce-318"
BASE COUNT          273 a          153 c          167 g          257 t
ORIGIN      
        1 tagtttcagt tagatttaag aggcaagaca gaggtaaaag tcagtgtagc aatgaggtgc
       61 attaatctac ggtgtcagtc tctcttcgtg ttgctttttt attcctacag cttgatagat
      121 aattcgttta tatgcaatag gaaaaattta ctttgcttcg tgcagcacat ttataaatgc
      181 atcataaaga aatagttttt aaaaaggtta ttgcggcttt gaaaaaatat cctggacttg
      241 gctttctcct tttgatacca ttttctctgt gatgtaactg agtgattttg cagcagaaag
      301 ctccaaaaat taaacctgaa ctttccaaat agcttcctaa taaccgttgc ccaaatcaat
      361 ggggctccat gaatattttg acacagttta aatgggtttg tatcctcacc attgagatct
      421 ggtgatttag cctgtcaggt tgcaaatgtg gaaatatcac ctctcactga gcaaagtcca
      481 atatctcatt agaaatgaaa atagaagaga agggaagcac aaatgctgtc agtggcagtg
      541 aggaaagaaa ttaaacctcc ggaggcctgt atatcttata caaaagatta tgcactgcca
      601 ggctgtataa atcatgccaa ggctctgggg ctgcaatggg ctagaaaata aaaaaccata
      661 aaagtgtcat attgaaatac agtcactgag aattctttta tgatgagtct aaattcgcct
      721 gacattcccg caaattcagg ggcctgcttg gattgtttat acccagactt ttgctgtcag
      781 tcacgaagtc ccagtttcca cagcaaatta ttctaaacag ggcttattat caaggcataa
      841 aaaagttaaa
//
LOCUS       KCPA01002304             485 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 253500tic ultra-conserved element locus
            uce-7983, sequence.
ACCESSION   KCPA01002304
VERSION     KCPA01002304.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 485)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 485)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..485
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="253500tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>485
                     /note="ultra-conserved element locus uce-7983"
BASE COUNT          153 a          105 c           97 g          130 t
ORIGIN      
        1 ttagtaatat catttctctc atagtttatt acagggaagt aacgggcttg cattctgaag
       61 cctgtctcca cccattgcat tcctggtgat ttttcaattg caaaatccaa ggcccagtta
      121 tttcattaat tcagcaccca agtagtaagg cttttctctc acatctttca gtctcctttt
      181 agcaaattat cccatgacgg aggatttatt cagtcaaaga cctcggactt tgagaggcaa
      241 caaaagaatc aagagacttt ctggtccacc tgcctggcga atgatgaggc agggtaaagc
      301 ctcccctaga gaaaccaatc aaaccattgt gtggcacagt cagacctttt caactgtcaa
      361 gccaggagag caggaaaaga gatgaaagaa ctcaggatga agctaccatt tacagaacca
      421 tgtgggaatg gtctccaaag atttaataat tgggatggaa ctcaactttc tgaaaactaa
      481 aagaa
//
LOCUS       KCPA01002305             647 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 253609tic ultra-conserved element locus
            uce-4078, sequence.
ACCESSION   KCPA01002305
VERSION     KCPA01002305.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 647)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 647)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..647
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="253609tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>647
                     /note="ultra-conserved element locus uce-4078"
BASE COUNT          204 a          110 c          137 g          196 t
ORIGIN      
        1 caccaagaaa ataaactgtg tgaaagccat taaaaacgtg gtttaaactt aagaataaat
       61 gcaatggcat agtcacattc tttaaaagct ttgctctgct cagaatggtt ttgttattag
      121 tgattcttaa tgcatgagat agtggtttgg aataaatctt taagtaattc aaaacaagga
      181 ctcttcagta aatagttgaa attaaagggg gagttagagt catctggttt ccattaggat
      241 gataaaatag ttcacttgaa accttttaca agatgctttg ttactgggag gtgtctgtgc
      301 atctcactcc atcactagcc atttgacaca acataaaagg cttcaaaagc catgctaggc
      361 ttcttaatca aaaactaatt gtaatagata ttggggagtg ttaacactgt gaccgctagg
      421 ttgtatcttc agtatataag caggagtgaa cattaaacac aaccctgagt tgatagggct
      481 tatcagaatt tcagagttaa gtgctaagta ctgcagcccg gtatctgtgc gccgttgctt
      541 tgtaccactt ttggagttaa ttgtgctgca gggcttcgtc tacccagcaa aatttatagc
      601 attggcagag aaattggaag cccgctgaag aaactgctgc agtttac
//
LOCUS       KCPA01002306             674 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 253720tic ultra-conserved element locus
            uce-5446, sequence.
ACCESSION   KCPA01002306
VERSION     KCPA01002306.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 674)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 674)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="253720tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>674
                     /note="ultra-conserved element locus uce-5446"
BASE COUNT          219 a          101 c          123 g          231 t
ORIGIN      
        1 gtagccttga agtgactctt tttaacataa tgctttacta atgaacattt taaaccaaaa
       61 cgaattttaa agtttcattg agggacagcc atgtacttaa tacacttggt ctggctgaga
      121 tgggtaataa tcatttttaa atccataagt ggttgaaatg tcaagtttat ggctaatatg
      181 gactataaga gttttctgtc aagtgttaat gataaaccca ctgcctgtaa aaactacaaa
      241 aggacagtgc ctctttaaca gggactactg tttgtgctcc atggagcttt gcagtattag
      301 taaagcagca tgaaagagtt gattttcatt ttatgttgtg cttgtgaggc attaacatga
      361 tgttctaaca cttgtaaatg aatacagctc ttgcctaatc tgtcatttta atgccttata
      421 gattttattt cactctgtgt tgtaccagat tctcaataat aataatcaac tgctttgttg
      481 ttctcttgca gaaattaaat ttctgtagtg agtgtgcaac taataaaaga tgttgcttga
      541 ggaaacaaaa aataaatatg atgaatcata aaagttgtat gtagggggtt gctcatatat
      601 gaaagacaat tactgaagca gtggtaaatt catctgattc tcatattgtc aacagcttaa
      661 taactctcac aaag
//
LOCUS       KCPA01002307             774 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 253830tic ultra-conserved element locus
            uce-6923, sequence.
ACCESSION   KCPA01002307
VERSION     KCPA01002307.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 774)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 774)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..774
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="253830tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>774
                     /note="ultra-conserved element locus uce-6923"
BASE COUNT          237 a          159 c          148 g          230 t
ORIGIN      
        1 ggagtttttg ttttctttga cacgtcttgt gaacacttca gctgcagtat catgacattt
       61 tctgcataga agtgtgtgtt acttgcttca cctgaggcca cttcagtgaa accacagaat
      121 ctgtctgcat aaagcagcaa gagaggggct atggtggtgg gttttttaac tgcttaaaag
      181 aagaacaaag aaacgactcg tcgttaccag tgatcaataa agagcagaca ggcataagtt
      241 ttcttaatgg tttctttttt aaagatgtgt atgatgccgt atgcgaggta acagcttctt
      301 taggaacatc acagcaagag acactggttc atgtaaggtt cacctattac actgccctcc
      361 agccagctgg aggctaacca gtctgataac cctacaccac cacagcacag gcccaatgat
      421 ttttacatca agcagcctga tgtactgctc tgccatctac caatcccttt tcaatattga
      481 tccattccta aatgagcctt ccctgctttg taccatgagc aataattaaa aaagcagcac
      541 attgatttta actaatatta tgaaggatct ggatgtgcac atgcttacaa aatagcggac
      601 tttacccatc attcatagca caacaaagga tcctgattaa agtttggaca cagggaaaga
      661 gaaatgtgtc tgcaattgaa cgtgtcaaaa cttataccta ttctgtttta ttataaatct
      721 tgttttggca ccaagggacc tagtcttata attttcatta aaataaatta gaga
//
LOCUS       KCPA01002308             559 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 253940tic ultra-conserved element locus
            uce-424, sequence.
ACCESSION   KCPA01002308
VERSION     KCPA01002308.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 559)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 559)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="253940tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>559
                     /note="ultra-conserved element locus uce-424"
BASE COUNT          166 a          106 c          116 g          171 t
ORIGIN      
        1 gtaatacttt ctctttatta gtagccagaa tgttttgaga gagtaactaa gcaaagacct
       61 ggagattatg aaatttgctt aagtgttaat gggttgattg ctgagttaca gtctgccgtc
      121 tttactggaa attgattgac taatgctgca ggtcttcaca cttgacgctc ggatttgact
      181 cgaaaattct gccaagtctt ttactctgaa atttatctta attagatctg aaagacctgc
      241 cacagcagaa tagtcacacc gattaaaatg aaaaacagga gaaattactg atcaaattaa
      301 tcataatgtc gggttacagc tgtaggtctg atgtaatttg ccactccagt gagttacatc
      361 ggcccaggca gaggaaagag agctggtttt acgctgatcc gtaacaccag gcagcttcag
      421 gcagtccatc aggatgcttg ctcctttcag tctcttggct tattctgaac ttaggggtgc
      481 aactagaaac aatttaggca aaagatgagc tttccaaatc cttgtttcac caactacttt
      541 tgtttgaagt aattaacaa
//
LOCUS       KCPA01002309             465 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 254048tic ultra-conserved element locus
            uce-5559, sequence.
ACCESSION   KCPA01002309
VERSION     KCPA01002309.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 465)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 465)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="254048tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>465
                     /note="ultra-conserved element locus uce-5559"
BASE COUNT          130 a          118 c           84 g          133 t
ORIGIN      
        1 aaatcagttg cctgaagctt tgagctttca aattaggcta aagaggttcc cctgataacc
       61 agcagtgttg aagctttcag cattatttag ctgccctggt atcagtaaga gtttccagtt
      121 agaagaaccc ggagacctac tgcactggta aggtaaccca cctgccctct caatactttg
      181 aaaaatctgc agtttaccaa gcataactgg gagcaaatgc aactctccct tcttcaacac
      241 tatctccgcc tgtgcagcct attttgcatc aaaagatcca tttgaaagta gagatccctt
      301 ggagctaaat attctaaact gacagaagaa tttctagtgg cacaccagcc tagagccata
      361 tttttatgag gacatcactt tctatttcta agcttcagta tgcactcatg cttcctcatt
      421 gccaggagcc atgccacatc aagttgcctc ctcccagctt ttatg
//
LOCUS       KCPA01002310             602 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 254155tic ultra-conserved element locus
            uce-1976, sequence.
ACCESSION   KCPA01002310
VERSION     KCPA01002310.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 602)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 602)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..602
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="254155tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>602
                     /note="ultra-conserved element locus uce-1976"
BASE COUNT          201 a          115 c          117 g          169 t
ORIGIN      
        1 gatgaaatct tttaaaatca tgaaaatcca caaaggttct aaattggttt tctcccacaa
       61 tatccctctg caaataaatc aaaggcttaa gccaatcctg tgctcgacca ctaccgattg
      121 taaagaaccc ttaaagctgg gcacctgcag aacataaccc aacttctcac ctgctgtgct
      181 gtgttcatgg caccctgcct ggaggtaagc tctgcgggga ttggtaggct ccatgcctcc
      241 tcaatactag gaagtaattt agttttattc tgtagactac cttgtggaag gttacacaac
      301 tgagcctagg aaaaattatg taaaaagcaa atttaacaca agcctacttt agtaagagca
      361 agtccatgaa atcttcctaa atgctgtagc taattaaaga gaggatagat tttaaatttt
      421 ggggtttaga aaggtaaaga gggtaaccag aatataaacc tttgtgacaa tcagaacaaa
      481 gatgagctct ggattcagag gtctcataat tccttttttc tgaaattgca aacaagagtg
      541 aaagatagtg tgttgcgtac tctcactata tgttatgaga acttaaatgt agacaaatgc
      601 aa
//
LOCUS       KCPA01002311             470 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 254262tic ultra-conserved element locus
            uce-4511, sequence.
ACCESSION   KCPA01002311
VERSION     KCPA01002311.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 470)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 470)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="254262tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>470
                     /note="ultra-conserved element locus uce-4511"
BASE COUNT          126 a          120 c          107 g          117 t
ORIGIN      
        1 ctcccttgga aaggaagctc gaagggttta cttctcctgc agccgctact ttgttttaac
       61 tatttgtttt ctttctccct aatgggaatt aacgcagcga tcccgagcag ccctgcagag
      121 gtacctgttc tactgcaacc gctacatgaa ccacatgcag agcctgcgct tcgagcacaa
      181 gctctacgct caggtgaagc agaagatgga ggagatgcag cagcacaaca tgtcatggat
      241 cgaggtgcag ttcctgaaga aagcagtcga cgtcctctgc cagtgtcgtg ccacactcat
      301 gtacacttac gtctttgcct tctacctcaa aaagaataat cagtccatta tctttgaggt
      361 aggagatcag gaattcacac tgcaaaacgg aggaaataga tttaatgcac ttttacccaa
      421 gtattctgtt gtgcaaaagt tagaggctca caggagcaca cggctgcccc
//
LOCUS       KCPA01002312             526 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 254374tic ultra-conserved element locus
            uce-3333, sequence.
ACCESSION   KCPA01002312
VERSION     KCPA01002312.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 526)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 526)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..526
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="254374tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>526
                     /note="ultra-conserved element locus uce-3333"
BASE COUNT          145 a           92 c          109 g          180 t
ORIGIN      
        1 tttgtgttat ttatgttcat aaacaggagt taaaaacttc ttacaaatac gtattttcct
       61 atttacatat attcaactgt gtctctagac ttgtctttag tagacaagta gacattacag
      121 tattcatttt atatatgtca gatcctcaag ggccgtgact tttgccagat gaagcacttt
      181 tgattttgag tctgatgaaa cacagtgctg ttattgatct gtgcatgaca cagccagtct
      241 ctctgctggc agagtgtagc aacatttatc caggaatttg tgaaatgtca ctcggatcat
      301 gttcgtaagg taaactgtgc aaaatccggg attcaagctg agaatccatg aggaattgga
      361 cgtgactctc ttattccttc atcctatctt ctaggtcagc caagaggtat tcgtttgtct
      421 gtgttttgta ttaggtgttg aagaaagtat gattatcact aggaacaccc tgttttctca
      481 gggtcacttg ggagaagaaa gtgatctgag cattccaagt atgtaa
//
LOCUS       KCPA01002313             796 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 254486tic ultra-conserved element locus
            uce-5286, sequence.
ACCESSION   KCPA01002313
VERSION     KCPA01002313.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 796)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 796)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..796
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="254486tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>796
                     /note="ultra-conserved element locus uce-5286"
BASE COUNT          268 a          150 c          178 g          200 t
ORIGIN      
        1 cacctgcaaa ataccacaag gctttggaac agtagatcag ccttttacat aggcacaggc
       61 ataaaactga acgaaggaac aagctctgca ttaaattcag ttctccttaa ggataatttg
      121 gaatgaggtg aatcattaat cgtgatacat ctgttgggaa aatgtttcta atgcctgtgc
      181 atttctgaga taaatagcaa tgatttgtat ttgttcctgg gctcctacat gatattgatc
      241 tcatttgtta gttgaaattt ttaatgagaa gacttgagag gacttaagaa actaagacga
      301 aacagacaaa tactagttct ctataagctt gaacagacat caaaaacagc accagctgcc
      361 atatttgtac ctactttgta gggctgcagg tatgcaaggc cttcaaatga ggcttccagg
      421 tagcaatgga aaccgatttc tcatcagcag cataactacg ccatacacac tacgtgcagg
      481 atatatggta aaaacaaggc aagagggagt agggggtgaa acaaaaaatt gaaaagcaga
      541 ttagtaacca atacaagtcg tatctttctc ttatcattca tagcactgat acatgcctga
      601 ggggaggaag aatactttca taatatcgcc aggtggctgc cacgtttgtt cggctggcgt
      661 cggtagaata aaaccgccag gaagcctggt atggggaaac aatagaaaag cacaaaggaa
      721 ccaagaaaat gaagtgacaa tgccaccgct tctgctcagg ccaggatgtg ctcggttaga
      781 ctgattcagg aaatag
//
LOCUS       KCPA01002314             609 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 254595tic ultra-conserved element locus
            uce-6464, sequence.
ACCESSION   KCPA01002314
VERSION     KCPA01002314.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 609)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 609)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="254595tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>609
                     /note="ultra-conserved element locus uce-6464"
BASE COUNT          153 a          179 c          149 g          128 t
ORIGIN      
        1 agcaggtgag agcagcagga gacacacact tcagatttca tgtacagaga gtagcacagg
       61 aagacaaatt gagtgaatac ctcaggatgc tgctgggcca gcccccggcg ctacccagtg
      121 gcagacaaat ccccgccctc agccttggca tgacctgctg agctggctcc tgtggccaaa
      181 ttctcctcat tacctgcttc tctcaaagat aagaggctct tgtgcaaagc tgctaattta
      241 gtcccaaaaa taaatctgga tgcgaaaggg attttgacaa gatgcatgta gaggttgggc
      301 gactagtctt aattaggcca tctttgttta catttgatgt ttatcagcta attggcatgg
      361 caaggtgtga gtcacacggc ccctctggca tgaaatcagt tcgcaggaga aaaactggga
      421 gaacaaatga tcccaattat aagaaaaccc actgtaccat cccacggact acggagcctc
      481 ccacccgcgt ccttgcccag ccgcccgccc cacctaggca ggggcccact cctcccaccc
      541 cggttcccag cccctcgccc tgcccgggac gccgcaggag caaaggtgat gcttcaccgg
      601 ctgctcgtt
//
LOCUS       KCPA01002315             682 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 254707tic ultra-conserved element locus
            uce-4915, sequence.
ACCESSION   KCPA01002315
VERSION     KCPA01002315.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 682)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 682)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..682
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="254707tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>682
                     /note="ultra-conserved element locus uce-4915"
BASE COUNT          204 a          147 c          140 g          191 t
ORIGIN      
        1 ttccatcaga agacacttct cagctattag atttgagcct attagagctg ctgatacaag
       61 aggaaacccc taagaaatcc tgaagggtgg aactggacac cacgggagca ataagcttgt
      121 aaacacaatc ttgtttttaa gggtttccta attactcaca ccttcttaag gaacacgtct
      181 caaacaaaca aacaagttac aacaactgat cttgacatac aagatgtcag aaccattata
      241 aaccccttta ctgcagaatg atgtcttttg tgcttagagg catgcttgct attcatagat
      301 ccactgctca gctgttccag tttttagttc tgcataaatg cccactcatt atgtccagag
      361 ggttttgcct gtagctttgt gttcgtagcc ttgaggcaaa tgtcttgatg gcttagggaa
      421 ctcggaatga ccaaataaca tcggattttc cacagcaacg aagccattat gggacagcat
      481 ttctatgtaa cagcaccctt cagtgtgcaa tcattagaac taaggattta accgggctct
      541 ggggacatca aatcactttg aagccagcga aatcttaacc attagatctc tgaaatactt
      601 gagtcaggca gctttatcag ttacagtgaa accaagtgaa ggggcagggg tttatcttaa
      661 gaatgtgctt ggacctgcac gt
//
LOCUS       KCPA01002316             512 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 254812tic ultra-conserved element locus
            uce-4982, sequence.
ACCESSION   KCPA01002316
VERSION     KCPA01002316.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 512)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 512)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="254812tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>512
                     /note="ultra-conserved element locus uce-4982"
BASE COUNT          136 a          102 c          103 g          171 t
ORIGIN      
        1 acgtctttaa aacatatagg cctcattcta ttccaagtac tgttcagagt gtaaccttca
       61 accgagactg gtagcattgt tgagatctca gaagtcttat taaaaagctg aaggcaacat
      121 gttattacct caaatgtcga acctgaatca aagcttttca gatttagttt gtagcgtgga
      181 agctttcaca aatgaagcgg ctcagcaaat ggtttggatg taactgttct ttgaaatata
      241 tctgtgttcc tgtgatagtg ttgtgttgtt aatgaacctt gtgtcttatt tcagagagat
      301 tccccctcta catccagaca gtcccccgct aatggtcata gcagcactaa caattctgtt
      361 tcggtaagat ttccagttcc acacagagaa agtgtgaaag ttctgttggt gctcatctgc
      421 cattactgtt atacttatcg tgtggtcagt ggaaaatttt gtcctgctga gagaacccag
      481 gttattgcat atgtaactcc ccgttttctt tt
//
LOCUS       KCPA01002317            1025 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 254920tic ultra-conserved element locus
            uce-1131, sequence.
ACCESSION   KCPA01002317
VERSION     KCPA01002317.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 1025)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1025)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1025
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="254920tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>1025
                     /note="ultra-conserved element locus uce-1131"
BASE COUNT          318 a          169 c          175 g          363 t
ORIGIN      
        1 tatagccata ttttcctttg taagctggaa atttataaaa gtgaatttta aagctactgg
       61 tcattaggta gcatgttgca gtttgggaaa tattttgttt ttaagcttaa caactgtcct
      121 ttttgttttc ccatgagatt aaggtcgtat tttttatgca tgttgaaaaa tattcactta
      181 tcagtatggg tgcaactgta aacaagtgat aaagtgacaa catttacaac agcaaaactg
      241 acagcatttg ctttaatttt ctgccatttt tgtaattata tcaatcaaga ccaaaactaa
      301 aatgatattt tagcatgctg taagaaatga ggaattcaga tcttaaaaga ccattacaat
      361 tagctttgaa acattcacca ttttaacata attgtttcat atagcttata cgtcttcatt
      421 tacaggcaaa tattctgttg atcttttata aacaaagtag cacccatctg cttcttgaga
      481 cactcctggc gcctattcat tgcaaaaata atacatgtcc taatgacttc cacatatttt
      541 gaaatctccc ttttgaaatt ggtcttggca gattatttgc aggtacttga gttgcatctg
      601 tttgcaattt tgcaaatgcg gaagacttta atgttgagca ctgcaagagg gctattttaa
      661 tcctcagata acataggctg tcatcaaaag ccacatttat cttttcgaag gtggggcaaa
      721 tgtttaatgt taaaagacag taaaaggtca aggtcaaggc tgaggtctga atattttcct
      781 ttcataaaat tgtgtctttt gtcatttact tcttgcattt ttttcattta agtttcagct
      841 tagcttccca ttgccaagag gatgttttgc tgataaaaat gaaagatcag gaagagagta
      901 aatctgaaat aattgtgaac ttcggtctgt tgtacttatt attaccatgt ggttagcagc
      961 tgaccaactt aagccgtttt tatttacact acacaactga gcagcattgt cctagcaaag
     1021 tgcaa
//
LOCUS       KCPA01002318             707 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 255030tic ultra-conserved element locus
            uce-5391, sequence.
ACCESSION   KCPA01002318
VERSION     KCPA01002318.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 707)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 707)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..707
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="255030tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>707
                     /note="ultra-conserved element locus uce-5391"
BASE COUNT          223 a          134 c          129 g          221 t
ORIGIN      
        1 ggaagggaaa gaaaaaggaa attcaccctg ttttcatctc ctcaaataaa tgccgcggct
       61 gtgaatctat gcaactccag tctttactgt gcaattgaat gggaagtctc ctgggtgaag
      121 agctatccgg tgaatccctc gcagcactga taattatgcc attctgactg cttacttaat
      181 ctatttgaat ccagaggtga gttaagccac ttcctgacca ttaaagtaaa ctacatgggt
      241 aaatactgct gtcactaagg ggtgtgatga agcttaacta caccaacatc ttaacctcag
      301 ctcagtgcaa ccccagctat tccatcacag ttcataaatg cgattgcagg tccatctttt
      361 gattcagcaa tttaataact tcgagtgctg tcagtactgc tttgaaaaat ggctcctata
      421 aaatgtaaca gcctcaatca gattgtaaaa gattcaccca ctgaagattc ttccatttca
      481 actataatga attaatgttg agctgtgtag aagttcaagt gtcatttaaa ctaatgtgaa
      541 tctactgtaa ctttaaattt taactggact atgactaaga atttactggg aacatcaact
      601 tcaattgtag tgatttttca tggtaaatat gaattgcaga ttttactgtt tcttttgttt
      661 taacaaagca gggaagatat ttagaaaaca acagattttg aggctta
//
LOCUS       KCPA01002319             372 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 255136tic ultra-conserved element locus
            uce-3741, sequence.
ACCESSION   KCPA01002319
VERSION     KCPA01002319.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 372)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 372)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="255136tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>372
                     /note="ultra-conserved element locus uce-3741"
BASE COUNT          126 a           67 c           75 g          104 t
ORIGIN      
        1 aaaagacaca tgatcctttt agtgattcat caaacctatc tcatcacgtt gagttacact
       61 tgcaaaatat ataaggaaaa atatagggtt acttgatgac gatagtactg cagcctgaca
      121 gctgcctgca aatattttca ccatgattac tcttactaaa agtaaaccac tgggtaaaga
      181 tagctcaaac gtgacaaggc tcaaatagga tgcaaccgac tctatcctga atacttttgg
      241 ctacatatgg agatagattt gggattataa ttgtttccag aactttaagc ccaagcaggg
      301 tgcagaattt tacgagactg gctttgagag ttagtgaggt agaaatcaat caactttgtc
      361 agggaatgag ac
//
LOCUS       KCPA01002320             702 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 255245tic ultra-conserved element locus
            uce-4776, sequence.
ACCESSION   KCPA01002320
VERSION     KCPA01002320.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 702)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 702)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="255245tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>702
                     /note="ultra-conserved element locus uce-4776"
BASE COUNT          209 a          131 c          122 g          240 t
ORIGIN      
        1 gtcatatcga tctttttagc actaaaatat gagccacttt actccactcc ccgatgctgt
       61 gatgtgaaaa ataataactc ggatccaaat taaaaatatt gatctctgga aggtgttgaa
      121 agtaaataaa caccttccga agttttcggg tcagccaaga aatggtattc agcaataaat
      181 gtgtcggcat gtcagaatcc agggttcttg atctgttttt cctttcaaat tgatttttca
      241 ttacttactt cctaaaagtg ttggaatttg gtcctctacc gttaaatctc agtgtttggg
      301 caaattattt ctttggggct tatgaggtgc tcctaatcca ctcggtcatt gattgattga
      361 tttttgactc aataaacttg cattaccctt gctttattta aggcttccat cataattttt
      421 tgtacattta ggcttgactt ttttatttcc ttctaacaga tgagctgaca ttggtctatc
      481 aaacatgtgg gaaaacaatt gccacaaggt taattttatt gctagctcca tgcattttaa
      541 gtaggtgcca ggtattttcc actccaggct gataaattgc agttgaacca ctaaagcata
      601 agaatgaaca gaagcactgt aacaacaaca atagaaaccc catagaaatg catcacagag
      661 cataagcatt aaatggatta tttttgcttc attggtttaa ct
//
LOCUS       KCPA01002321             481 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 255351tic ultra-conserved element locus
            uce-6103, sequence.
ACCESSION   KCPA01002321
VERSION     KCPA01002321.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 481)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 481)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="255351tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>481
                     /note="ultra-conserved element locus uce-6103"
BASE COUNT          145 a          105 c          109 g          122 t
ORIGIN      
        1 ctccaggttc tcaggatgaa cttggagggt ggagtcatgc cctgaattgt ccctcataac
       61 aattattgca ttacaaggaa caattaatgg tgtagattag tctaacttca tcagttttat
      121 ggccatttta ttgctctgca gcggtgagag gcagagcccg cctcctccat ccccgcgtgt
      181 aaagggttaa atgagatgag tgacagcctt tctgcatgat ttacaacttg gagccctgta
      241 gtgaaaccag cgcttgatgg atgatcctga aagacggaga ctaaccataa atcatgtctt
      301 tgaatcattg acaaagataa aggagagaaa gaaaaagcac tggcattgac attcattctc
      361 ccaataatgt acattgacta gttacaatac agagccttaa ttaaaaaagc gaactccgct
      421 gcgggagcct cgtggaaatc acaaataaaa gttccagccg catccagggt tgcctcgccg
      481 g
//
LOCUS       KCPA01002322             645 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 255455tic ultra-conserved element locus
            uce-6693, sequence.
ACCESSION   KCPA01002322
VERSION     KCPA01002322.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 645)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 645)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..645
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="255455tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>645
                     /note="ultra-conserved element locus uce-6693"
BASE COUNT          210 a          130 c          140 g          165 t
ORIGIN      
        1 ctcacacaca cacacacagg caaagagaaa gaatgaaata agccattaag aaatatttcc
       61 gcataatgca attattacag ctgtataatt gaatggggaa accattgatc tgtagtagaa
      121 aggaaattgc tcttttcatt gtgttcctat gaatatgtga acattaatct caatctataa
      181 tcaacgttca tttcaaatct gattgcgtgc cactaaacac ccgtagctat gctaacatta
      241 tgttaatacg gttcaacatc atagctccca gcttcacagc acaaatattt ttctttggca
      301 atcaatagta atttcagctg agtggatgga agtcacgttt taatggtaat ctttcctcca
      361 agcctccaag tggaaactcg actggtacct taacacggcc gcagtgcatt gcatgtaatc
      421 agataaatta acctaaaaga gagagagaga aaacacagat caggaataaa aagcggcgcc
      481 aagaagctct gcattttcct gatggattaa agtgctcatt atcatgagag agagagtgga
      541 tttcaagagg ggaactgaat tcccttggct ttgagccgtg gctggagagg cagcaggtca
      601 caatactctc ggcgcagccg gggatgcctc cgaggagggg gaagc
//
LOCUS       KCPA01002323             357 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 255556tic ultra-conserved element locus
            uce-6287, sequence.
ACCESSION   KCPA01002323
VERSION     KCPA01002323.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 357)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 357)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="255556tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>357
                     /note="ultra-conserved element locus uce-6287"
BASE COUNT          120 a           54 c           64 g          119 t
ORIGIN      
        1 ttccctttca aagtctctac tagaggggca cttactctgt caaatctgct atagtaatca
       61 aaacattgaa attacttctt tccacactaa atatactgga actggttgtt tgattaaatg
      121 tagagcagag agtgcaattt gctaaattac aagtattctg aacatgtaaa tatagtttaa
      181 ttactgcaat taaagaagat tactggagat tggcagatgg gaatgtaatg ctgttttaat
      241 tagagttttt aatgcactgt aacataagca taatattaac cctttatcct ggaaagggct
      301 ggctagtctc tgaaaaatat cctttgaaaa atgtactaga gctagtgttt cgtaaca
//
LOCUS       KCPA01002324             836 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 255666tic ultra-conserved element locus
            uce-7656, sequence.
ACCESSION   KCPA01002324
VERSION     KCPA01002324.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 836)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 836)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..836
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="255666tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>836
                     /note="ultra-conserved element locus uce-7656"
BASE COUNT          218 a          167 c          203 g          248 t
ORIGIN      
        1 tggggagcag gatgctctgc cctctggctg ccactgcaga ggggcagcga gttaagtgct
       61 gcaaagccct ggatgggcta cctgtgaggt ggcaggttat gacaaatgtg tgccattgat
      121 gggtacatgc tttttgacct gctttaattt ttctagctgt gcctttaatt gccagggaga
      181 ggacaaatgc aataaatcca aacggatcag agcaaggctc tacaaggaaa tacgttttag
      241 aaacactttt ttttccttaa ttaatcggga ttttgttgtc aggctaaaac agactaaaaa
      301 taaacagctg tatagtactt cattaagctg cctgcttgga gtgattttcc cattgattag
      361 tctcagggct aatgctggtt cattcctcat ttcattgcta attaacatca gctctgctcc
      421 tgaccacttg accgcactct ctctatgaac atgtgctggt ttggcaagta ataactgctc
      481 cctccctcta gaattaaggt acaaaatagc tatcaagagt agatctgtgc ctctactgta
      541 aggagtaaaa ccgtgtcggc cgtaagattg gtaataaacg tagtttacag agcgcaggag
      601 tttgattgag gaactatgta aatacagatg atgagctcaa gctgctgtat gaattgacag
      661 gcttggctca tctcctgtca gttgagttga ttcaggctct tctgggatgt tcatggtgca
      721 gattacctga cccaggagct tagggctgca gggtgtcaga agagggcatc tttggatggg
      781 cagcacttac ttttcccagt ttcctcaatg ttctaagagt ttgaataatg aagtac
//
LOCUS       KCPA01002325             788 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 255776tic ultra-conserved element locus
            uce-3239, sequence.
ACCESSION   KCPA01002325
VERSION     KCPA01002325.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 788)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 788)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..788
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="255776tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>788
                     /note="ultra-conserved element locus uce-3239"
BASE COUNT          217 a          145 c          167 g          259 t
ORIGIN      
        1 ctgcagttgt ttagagaaat atgtgttccc tgaaggacat aaagcacaga tttgttttct
       61 gatggaagtg tctcacttct caaactattt tccctaaatt aacttccagt tttccttttt
      121 ttcttcacat gaggtgtgag aatggcggat gttaaacaaa agaaatattt ttgccaataa
      181 aatcattata tgcaagtagc cttctaatct cttaattttg gttgtttctt cgttacctta
      241 caagatctat atttcttctc tctttaggat atctcatgtc agatttaagg cttatttaaa
      301 atgaacagaa agctgaagca attttcttta ttccatttca gtctcctaag gcctatttcc
      361 ccctggtgag ctcatagcaa caggggggtt taagggaatt cagctttctg caaattaatg
      421 tctcacatca tgaaaattca ggaccttttt tttttctatg tcttgaaaaa gtaatacagt
      481 gagtgcgagt attatttctt gccagcgggt ggaagatgaa tgattttgtc acagttttac
      541 tgcttgatga gcagtgtcct gagggtcagg cttaagtctg tgtcactatg ctgctcatta
      601 ctcttgagct aaataagggc tgattggatc taaattgcct agcacatggg ccgcagatga
      661 gctcagtgag taggggatga cctgctattc aggctgggag taaccccggt gtgcaaatgc
      721 tgcattagaa caccgtggga gaatgagagg ctaccgaccg ctgccagcaa aagaaatcga
      781 aatgtaaa
//
LOCUS       KCPA01002326             600 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 255887tic ultra-conserved element locus
            uce-718, sequence.
ACCESSION   KCPA01002326
VERSION     KCPA01002326.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 600)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 600)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..600
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="255887tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>600
                     /note="ultra-conserved element locus uce-718"
BASE COUNT          181 a          112 c          109 g          198 t
ORIGIN      
        1 accaaccctc cccagaatgt tatactatta attgccaatt tgcatatgtg tgcagctgct
       61 gttttggctc cgatcttcca tccgataagc ttgctggagg tatcacagag cacttggcag
      121 ctttcctatt tgaaaagaaa gccttcctaa ctacagaaca gctgatagtc tatcagtgat
      181 agaccctgat ggcgtgaatt acaattacac tacttttcac actaaatctg ggtgatagct
      241 acttggaaag aagtttcatc attttttacc acaaactgga aaaagaatta catggtcatg
      301 ctgtgctttt aaaggcagtt tggttcactt ttgtctattt aacacctaat tccaaggagt
      361 ccataggcat ctggagatct gaacatggcg taatgaattc actgtttaga tgggagattt
      421 tataaatcta cctcaaatta catttattaa caaggagagc aggaagtgtt agagttgtta
      481 gacgcttcat ttattaaata atttgtggat attttcagtt gtcatatcca gagtcatggg
      541 ggtttactta ttttttaatt agcaattcca aaacaatgct accacaattt aacaattcat
//
LOCUS       KCPA01002327             609 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 255996tic ultra-conserved element locus
            uce-4347, sequence.
ACCESSION   KCPA01002327
VERSION     KCPA01002327.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 609)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 609)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="255996tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>609
                     /note="ultra-conserved element locus uce-4347"
BASE COUNT          152 a          180 c          130 g          147 t
ORIGIN      
        1 aacttatccc accttgagac atcactcaga ttaatgttcc caacacccaa agccagagag
       61 actctcttcc aaacaaagct tcagccatgg actcctcacc atcaaaggtg cccaccttgg
      121 gacccactca ccctccccat caccagctca gccccccatc accccaaatc ccaagagcct
      181 cacaacatgc tgagaaaggc agaaaatgcc atccctgctc ccaacttaca tttaaaggct
      241 ttaggtgagg tttcgctagt ctgaatcttt ggggcaagca tgcgtttgcc aaaaacctga
      301 gcatcaaaac ttgcataatc gaaggtgacc ttggagtact tctccagctc cttggccaag
      361 ttggcccggg gggttgctgg gaccatgttg ggccgatagc ttccatactg agggatctcc
      421 agttgcttca caaagcacat aggcctgagg atgaacgaac agcaattatt tcttttcctt
      481 gacaaggtga ctgttgagag gggaccggac acagtcagct gcatcttgtt cctggacgag
      541 gaggctgtga cagccctttg ctctccctca gcaagtctgc gtctgatttg gacctctctt
      601 ttttctatc
//
LOCUS       KCPA01002328             436 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 256102tic ultra-conserved element locus
            uce-3081, sequence.
ACCESSION   KCPA01002328
VERSION     KCPA01002328.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 436)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 436)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="256102tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>436
                     /note="ultra-conserved element locus uce-3081"
BASE COUNT          150 a           74 c           66 g          146 t
ORIGIN      
        1 ctatttatta attacaaaaa atgtgatgac tcctatagtt ttcattcaga gcaaaactta
       61 agaggaaaat aatatgaacc tcaacagact gtttgagtta tctgtccctt ctttaatctg
      121 agagattact caacaaaacc aatattcatt caacaacatt catgaaatct gttgtggatt
      181 accaatatca tcagttaaac ctgtttcaaa tttattgctt tcattcaggt taaataataa
      241 aagagtccat ttgtaccacc acatgtatat acacgaattc agctttcatc attctctaca
      301 ggtttaatcc gtgatttatg ctttttaaca cagttttggg caaatctgtt gaaaaaattc
      361 agccagactg atagaagagt tagactggat tactgtgatg tgtaccgtgt ttaaaaccat
      421 tttggagaaa gggaaa
//
LOCUS       KCPA01002329             486 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 256211tic ultra-conserved element locus
            uce-7384, sequence.
ACCESSION   KCPA01002329
VERSION     KCPA01002329.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 486)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 486)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="256211tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>486
                     /note="ultra-conserved element locus uce-7384"
BASE COUNT          149 a           90 c           82 g          165 t
ORIGIN      
        1 ttttacaact ctcctttcat gatggagttt ttacttagag ttccctctgt tgatctgttt
       61 tcgattactt cagatcttta taaaatgaac tacaaaaaca caatttaaaa aactggcatc
      121 catcaccagt gactgcatcc aagtgtaaga aaatagaaaa gttggacact gaaaaaccag
      181 cctaattttt attgtacatg gacgtcctcc tcacagaaag tcagctggtt taaattcatt
      241 ctgttatgat ttgtaatatc taaatggaat tttcttcaaa gtgctcttga ttgattgacc
      301 cttagctgaa cgttttgttt ttattttgag gctgacaata atgtttgttg gcatgtgttc
      361 tgcttcaact gcgttgggac gccatgaagc tatctttatg agtcatccaa ccacaatact
      421 aaatacatgt cagcaaagga aatattatcc gaaaagggaa aaatcccttt gatgtacttc
      481 agcatg
//
LOCUS       KCPA01002330             686 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 256325tic ultra-conserved element locus
            uce-712, sequence.
ACCESSION   KCPA01002330
VERSION     KCPA01002330.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 686)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 686)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..686
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="256325tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>686
                     /note="ultra-conserved element locus uce-712"
BASE COUNT          235 a          118 c          137 g          196 t
ORIGIN      
        1 gcttcacttt caggaaatgt cttttcaaat gagcactgca gatctgtctg gctaagaaag
       61 gactcacaga gaggatacca tttcattcct aaataaataa atacaaatgc aatcagagag
      121 tatacgtgtt taacttgaca ctacaaaaga agaggcaagg aacaatagtg gagtccagct
      181 gttgtttttc ttgaagaagt cccagctcct catgcagaga aactacactt gagatgagct
      241 ggctgagaca aatgttctgt ctacacttta aatggcagct ggttattaaa tgagtcccaa
      301 taggatgaac acttgctatt gacaataagg taatataagg accatgcagt gcaatcagga
      361 tgggaatgtg aatgaaaaat ctttaatctg aaattacagc tgtcagggct atattataaa
      421 acatgaaagt tgcatctgca cttagaatta atgtgtccca aaagccaagt ttctcataaa
      481 gggcatgttg cagatacatc ttttataaat agactactgg tcttgcgtaa atcaaaccga
      541 actgtagcct atactaagga attaaaaggg tcacctcttc tggggttggt atttgttgaa
      601 cagtatttgg caaaaatgaa cattgattta caaagtccaa cagatactgg tagtagtatt
      661 actttataat gatattcact gactcc
//
LOCUS       KCPA01002331             728 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 256433tic ultra-conserved element locus
            uce-4887, sequence.
ACCESSION   KCPA01002331
VERSION     KCPA01002331.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 728)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 728)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..728
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="256433tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>728
                     /note="ultra-conserved element locus uce-4887"
BASE COUNT          223 a          138 c          160 g          207 t
ORIGIN      
        1 ttcacacaaa attattcaaa aaaattccta gaatatcttt aggcaataaa ggatacttct
       61 ggtcatcgtg tgaattctgt gtgcttaaac tctgacacaa accgaggact ttcttctttg
      121 tactaagtat gggaaagcct gctcctttga gaattagaat agctttcgaa gaattctgat
      181 ttaaatttca aactcttgat catagtcagg gagcaaatgt ttgtgtcctg aaattgaaaa
      241 ttgggttctt tagctctaca ccaagtgaaa atattaagca ttttgttgca tccactatgt
      301 gagccaagtt ccctactgtg ccttcaaatc cacagtgaat gaaccatatt tggatctgct
      361 tatcagaagg agacatttag aaagacaatg agcctgtcct gctagacgga gactcctgat
      421 gcttttagat aggcctgtgg tgaactgcaa aatgggccct aaaatcaggc tgacatggtc
      481 gcttaacaag ctgtggtatt agctgttggc tcagagaatt tctagtgtca cccacagggc
      541 tgatgatggc agccatcata attagaatgc atgaatcaaa aacaccaggt gaagattttg
      601 ccttggaaga aagaaaagag agaaggaggg aattaccatg ccctttgact actaagctgc
      661 tgcatgcagc tggatcagtg accaacagtg actgggcgga ttatgctatg gagatacttg
      721 ctatagcc
//
LOCUS       KCPA01002332             563 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 256544tic ultra-conserved element locus
            uce-4928, sequence.
ACCESSION   KCPA01002332
VERSION     KCPA01002332.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 563)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 563)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="256544tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>563
                     /note="ultra-conserved element locus uce-4928"
BASE COUNT          208 a           89 c           91 g          175 t
ORIGIN      
        1 tctcaggcac tatagaacct tcacagtaaa gataaagaaa gataaattga attaatttat
       61 tttgaatttc tgcattaata ttaagctaaa atctaaatag aaagactgta atcttagaag
      121 ttctagcatc agcaaatcat tcttgtttac cctacatgct aataaaacag gaacatgaca
      181 ctcctgaaaa cgagattgca aaatacagaa aatgtggtct gacagttttt ttctccccaa
      241 aggagggact gccactaact aaagtatttc ttatgaaagc tcgattgctt aagatgcaga
      301 atattaagag agaaaaacac tttaggacac agccatgtca ccagctgtta ctcaccctta
      361 atgaaattgt taagtgatat tcttcataaa taggtcagag aaacttttga attgtgaaga
      421 atgttttatc tctttctttg aaatgtttgt attaaattta gaactggtaa ttcattaagc
      481 tcattagctc tgactaggag agtagagcaa tatctaggat atagatttca aggcttaaaa
      541 accttagtgc ttacaaataa aca
//
LOCUS       KCPA01002333             494 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 256652tic ultra-conserved element locus
            uce-3014, sequence.
ACCESSION   KCPA01002333
VERSION     KCPA01002333.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 494)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 494)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..494
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="256652tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>494
                     /note="ultra-conserved element locus uce-3014"
BASE COUNT          137 a           76 c           79 g          202 t
ORIGIN      
        1 taagagtcca tagaaatttt tcctttgtaa tccctgaata tttgggttca cattatcttt
       61 agctaggatt tattagacta tttcatattt gcctttctgt ttattttgta aaagtatact
      121 tgtctagcac acatttttat gccagccttg ctttgcattt ttacagtctg ctaattagac
      181 cattttaact aatttgtttg cattttgtat gagcaagttg ggcttttgga ttgactaatg
      241 taattgcagc cagtttctgc caaatacaaa ttactctttc tagtgtgaac tagagagaaa
      301 agtaaatatt taatagccat caataccctt gcagcattct agagtgtgct tttttcctat
      361 ggaaagttta aataatttct tcagtgcttg attgcacttt aatgtcgaga aattattttt
      421 taatcgaaat aataatgaat tagacatttt agcatgtccg caagggtttt atttctgtgc
      481 actttgcagt ttta
//
LOCUS       KCPA01002334             688 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 256767tic ultra-conserved element locus
            uce-5158, sequence.
ACCESSION   KCPA01002334
VERSION     KCPA01002334.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 688)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 688)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..688
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="256767tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>688
                     /note="ultra-conserved element locus uce-5158"
BASE COUNT          189 a          139 c          157 g          203 t
ORIGIN      
        1 tggcgtgttc ggtctagtaa tcaaacctca agttggttta gactgtgcta gtacactaca
       61 tctctgtagg ggctttctgg ggtactagct cttggtagag ctatcagcac tggatttgga
      121 ctaaggtagg taaccttgat ggccttcaga ctagagattt tgatgcttaa aataatcagg
      181 tactctgtag ctttgaaacc ctcttgtctt acagatgtgg ttaggtgttg atgtaccaaa
      241 tcaaggtagt aaacagtcca agatgcagtt ggaggccatc ctgccctgcc ctatgctctg
      301 tgaactgacc tagctaggcc ttgttcctct atctgtgaat gcgtgactca tcgatatggg
      361 cgtttgtgtt gggcccatac caaccttgtt tagtcccaca gtgttttgtt cgccccacgg
      421 aagcaaagaa agcagcagat gaagccaaga tgaggtttgc ccacatagat ggagatcatt
      481 tgacgctgct gaatgtctac catgctttca agcaaagtaa gtctgtttta gtgaaatttt
      541 tgtaaacttc tatttctggg tttcaaggac acttgaaatc aaacaaaaca aaaaactacc
      601 caagcaatct cataataagc caggctttaa atcaatgctg agtaaccttg gacagcaagt
      661 gttcctgtaa ttaagaaata tgggaagt
//
LOCUS       KCPA01002335             412 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 256863tic ultra-conserved element locus
            uce-6881, sequence.
ACCESSION   KCPA01002335
VERSION     KCPA01002335.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 412)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 412)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="256863tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>412
                     /note="ultra-conserved element locus uce-6881"
BASE COUNT          117 a           91 c           67 g          137 t
ORIGIN      
        1 gcgatgacag gctcattatg gagcgacgca atctcctggt aaacactggg ttcccctgga
       61 agatgcttgt tcctctcatt attaattagc acgtgtccac tccgccagat ccagagccca
      121 aacttcattt gttatgttca gccaaatgca tgagtagctt tggagtaatt attttccaac
      181 atcatctaat acctctctgc acatcaatta aaaatcctct taacaaggaa ctgcattttg
      241 tttgagatca aatgcctcgt ccaaagctgt atcaatcatg tagagctaat tagtgggtct
      301 gctttatatc atttgtttta ctttattatt ctattataca cttcctaatg aaaccaattg
      361 aacaattttg aaatctttgt tcaattaatt gaaggcttaa aggccagctc cc
//
LOCUS       KCPA01002336             583 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 256970tic ultra-conserved element locus
            uce-4300, sequence.
ACCESSION   KCPA01002336
VERSION     KCPA01002336.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 583)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 583)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..583
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="256970tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>583
                     /note="ultra-conserved element locus uce-4300"
BASE COUNT          193 a          107 c          136 g          147 t
ORIGIN      
        1 aaatgtagag caatctacgt gtaaaagtta ttcagtacca ttgctgattt tgtttcagtg
       61 ccaaattgat taacaattcc ttatgtctgt tttgcagtcg tcaacaggaa attgaagaga
      121 aactcataga ggaagaaacc gcacgaaggg tggaagaact tgtagctaaa cgcgtagaag
      181 aagagctgga gaaaagaaag gatgaaattg agcgagaggt tctccgcagg gtggaggagg
      241 ctaagcgcat catggaaaaa cagttgctcg aagaactcga gcgacagcga caagctgaac
      301 ttgcagcaca aaaagccaga gaggtaacgc tcggtcgttt ggaaagtaga gacagtccat
      361 ggcaaaactt tcagtgtcgg tttgtgcctc ctgttccgtt cagaaagaga tggaatacag
      421 caaatctaat tcccttctca tataaacttg cattgctgcg aaacttaatt tctagcctat
      481 tcagaggagc tcactgatat ttaaacagtt actctcctaa aacctgaaca aggatacttg
      541 attcttaatg ggactgacct acatatttca gaattgtttg aaa
//
LOCUS       KCPA01002337             641 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 257080tic ultra-conserved element locus
            uce-7036, sequence.
ACCESSION   KCPA01002337
VERSION     KCPA01002337.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 641)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 641)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..641
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="257080tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>641
                     /note="ultra-conserved element locus uce-7036"
BASE COUNT          213 a          104 c          129 g          195 t
ORIGIN      
        1 aatactttta tctgaagact tcaaagtcac atgcaaaaaa atatatcaca gtaaacacag
       61 ggttgaaggt tttatagaat ttctactggc tttttttccc ttcttcttta aaagaaattt
      121 gtttactacc agtctttgaa aagcataaaa gggaggaaac tattaaaact tttacgtgta
      181 aggaacattt ggagctttgt gagaaggctg gttttgacag aatatgcgac atgtagccca
      241 atgtgagtaa tattatatct caaataaaaa tcagcccatg aatatacata atccaaaagg
      301 taattctccc aatctctgaa atgtaatgga gccactctag atcactgagg catgaatatt
      361 tactgtattc aggctttact gctctcgatc tgggttcaat tctgcaaatt aaaatgaagg
      421 ctctgtggat agagagatta aagaagagca tcccaaagcc tgcctgtttc cttggtgggg
      481 tagcagtgat ctggtcgccc ttctgttggg ttatttctac ttattggagt agttcaaaag
      541 caattgagag tggaaaagga ggtcattttt gggtcacaac cttgagttaa aggctcacta
      601 aggaaaataa acagagtgaa cataaagctg catttaaaaa t
//
LOCUS       KCPA01002338             459 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 257184tic ultra-conserved element locus
            uce-5856, sequence.
ACCESSION   KCPA01002338
VERSION     KCPA01002338.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 459)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 459)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="257184tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>459
                     /note="ultra-conserved element locus uce-5856"
BASE COUNT          133 a           57 c           83 g          186 t
ORIGIN      
        1 aactctaacg aagaggcagt tttaatgact ggtgaagaga tttatctctt tgtatattaa
       61 atagctgtaa tgtagctacc agaagcttga ctaattgagg tgtgagttct gactcaaatc
      121 tttttcatga tgattttgaa ataattggat tttaaaggta ttaaagtatt tttgttttgt
      181 acaagagttt gttgctctgt ataactcctg tatgcattgt atattgcaat ttattactgt
      241 cagagatttg tagacagttt cttattttca tattgaatca tgttactttt gtaattcagg
      301 taaacagctg ggttaattca tgtttaccct ttgaataaaa ttgtaagggt aaagttcatt
      361 tttgaatgca agttgccttt attataaaga ttgagttagt cttggttatg taacttgtct
      421 tgcatgacaa cctcaactaa ctttacatgt cagcttatt
//
LOCUS       KCPA01002339             653 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 257296tic ultra-conserved element locus
            uce-5821, sequence.
ACCESSION   KCPA01002339
VERSION     KCPA01002339.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 653)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 653)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..653
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="257296tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>653
                     /note="ultra-conserved element locus uce-5821"
BASE COUNT          225 a          119 c          115 g          194 t
ORIGIN      
        1 atctgcaaac catgaaagag tatcaagaaa ttgtcttttc ttagttctac taaggtgaat
       61 ccattaagaa gtccacatgt ctttttttaa aacaagttca tttaaaagca gactcataga
      121 atcatgcaat aaatttgaga aagacatttc cagcacatgt gttaagttca gcccttaagt
      181 tattttatgg aattgttaca agtcaacagt aggtggttta taaaatgtaa ttttatttaa
      241 tgttactttg ctgttacaga gggcttttca caaggctttt tgggactaca atcaatgatt
      301 agcaacacac aatagtggtc caaactctct aacaatcact ggacaaactt gacaccttct
      361 cacatgtgca caaacctgca tggaaaagta ctaaatttta tacttggaca tgtgaacttc
      421 aattggtttt cccattccag tgtattaaga aatgacatgc actgccaaaa agcactgcct
      481 gtactccaga agtaacatgc tgctaaagtg aataccagaa ctacaaaggc aggagtgtaa
      541 gtgaactttt attgggaagg gatatcaact taaacagcag caactgaaga ttaagagaag
      601 cccctgtttt tgaacacaca agcttctgta ttacatgata cgggaagcaa ctt
//
LOCUS       KCPA01002340             615 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 257406tic ultra-conserved element locus
            uce-4944, sequence.
ACCESSION   KCPA01002340
VERSION     KCPA01002340.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 615)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 615)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="257406tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>615
                     /note="ultra-conserved element locus uce-4944"
BASE COUNT          173 a          111 c          103 g          228 t
ORIGIN      
        1 ttttttagta agctttggta atatttctga acagcagact gaagtccatg gtgaaatgta
       61 agctttctgg agggttttgc tcataacgtc ttacatgttt gaacaaagat ccaggattgc
      121 ccttttctgt ttagcgttca gtggaaaatt gcatcagatc acttaatatt gcagtttgat
      181 atagtgtctt tttgtgccat tgagccagga ctttggaaca taattgccca gcagtattga
      241 tttaattgcc tgggtttatt tgtggactcc taattattga ctggaggtca atttaatgga
      301 gaaaccttta tgaacaccag gaaactgctg ctattgctgt tatacataat gaactgcatc
      361 atatcccttc agatcattct tcaagctaat tttattctac tgtgacagta cgataacatt
      421 taaaatgtca tagacatttt atttttatta ctgacatacc ccattttact gctgcactag
      481 aaactgagtg aagcactagt tgctttttac tgccatttta taaatttccc taaagtggat
      541 aaaagatacc acaactctgt tttcacttca cctctacttt atttttctta tgacttatat
      601 ctgtcagctt taaaa
//
LOCUS       KCPA01002341             505 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 257515tic ultra-conserved element locus
            uce-2565, sequence.
ACCESSION   KCPA01002341
VERSION     KCPA01002341.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 505)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 505)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="257515tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>505
                     /note="ultra-conserved element locus uce-2565"
BASE COUNT          147 a           87 c           94 g          177 t
ORIGIN      
        1 ggcaagtatc tcctgacaac taatttgata gttctctatc aggtaaacca tttgtgaata
       61 catcgattct ttttattttt cactgttctg tcttcactgt tcccgggttt tctctgaacc
      121 ggttgggcaa aaattgattt ttatttgttc cactggcctt gtggaaaatt agcttatgaa
      181 ctggttttta taggaagact caaagcacag aaaaggttgg aaaataagcc tatagcagtc
      241 aaaattgttg tctgaaatgt cttcagactg gaaggctgaa tttattgctc aaaacaagta
      301 ctagcattgt ggaggtgtgc agtcctgctc attatcactg gaaaaggggg aaccaaaaag
      361 cacagtaaaa aattaaattt taataatgct agtgatattt tctaaatcct tcttgacaga
      421 aagattctca ttatttttat ctgtctcaga gtaggctctt ttaatgccat ctcataaatg
      481 gccttagcca tgattgtttt ccttt
//
LOCUS       KCPA01002342             421 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 257623tic ultra-conserved element locus
            uce-4181, sequence.
ACCESSION   KCPA01002342
VERSION     KCPA01002342.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 421)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 421)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="257623tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>421
                     /note="ultra-conserved element locus uce-4181"
BASE COUNT          147 a           65 c           62 g          147 t
ORIGIN      
        1 ggaaaattat tacttttctg atgctgatag aaatactgta cttatgtctg gcacatctaa
       61 actcataaca tctatttgct ttgctttgtc aaaacatatg aaaaatcatt aaagtgtttt
      121 aataaatgtc tggttttctt gctcattcat cttataaata ttaattagcc atggatcagg
      181 caattaaagt ttaatcaatt tgcactaatt agcaccacat acttgcataa aaagataaaa
      241 ccagctccta catctggctg ttatttgcag tttttgtcaa gtgctgatga gtttcatctt
      301 gaagagaaga ttaagaagaa aagaggaaaa taagaaagta gtgttaattt tattaaatct
      361 tcaatcaaac cttctgttca taagctttat gggacaatac caggtaacat ttcactttac
      421 a
//
LOCUS       KCPA01002343             400 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 257733tic ultra-conserved element locus
            uce-2866, sequence.
ACCESSION   KCPA01002343
VERSION     KCPA01002343.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 400)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 400)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="257733tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>400
                     /note="ultra-conserved element locus uce-2866"
BASE COUNT          115 a          100 c           71 g          114 t
ORIGIN      
        1 cctgacagag aacaaaaagg tcagttgtac cctcagttgc ctttggagcc tgctgtgctc
       61 tgtgtttatc aaccaaacta atctatccga gttactctgg gcttcagaga aaccactcat
      121 ctgctgctct atgcccctcg gtcccccgag gctgtgctga tggcatctgg cgcgtttcca
      181 gagaacagaa gatggcacaa agctgccatt aaaatcaatt acatgggtca atgtttttat
      241 tagaatctct ctcaaactaa gtcatcagga tgacactcag ttatttccct gtgacctttt
      301 tgcgtatgac caaaagacac tattaaaaaa attcaattca agtcttaaag acaaaacaat
      361 gccttagcct cacaggtaat cctcacattt ccattttact
//
LOCUS       KCPA01002344             530 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 257841tic ultra-conserved element locus
            uce-4066, sequence.
ACCESSION   KCPA01002344
VERSION     KCPA01002344.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 530)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 530)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="257841tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>530
                     /note="ultra-conserved element locus uce-4066"
BASE COUNT          183 a           81 c           92 g          174 t
ORIGIN      
        1 agataccata tggatatcaa taagatacag aaatcaaagg ctacattcgg taaattacaa
       61 tgcaagctaa gtggatgagt gtcactagtg gacatgtaac ccacaacgtt ttggctacct
      121 ccatgaatga ttaattaaaa gaaaaaatag ttaatcaaga taaactacta cacctagcta
      181 acagaggact gaaagtttat catgtctaaa tatgtttctc atacatttac tgcaaattag
      241 tttttgaaag tgaatttcaa ggtctactga ctctgaggtt cactaactca gttttcatta
      301 agttttcaca aatgatctac tatagcatta ttcttttata gtagcggaga tttaaggccc
      361 agtatgaaaa gcaattatac tgtcagaaaa gtgtattttg acttattaaa aatttgaaag
      421 gaaactattt attttggtgt tcatttggag tgcatgttga cagtgtcatg aagaaagcct
      481 ttttctgggt tgtatctctc aaccttcttg ttgaaaactc gagaaaatct
//
LOCUS       KCPA01002345             706 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 257952tic ultra-conserved element locus
            uce-1562, sequence.
ACCESSION   KCPA01002345
VERSION     KCPA01002345.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 706)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 706)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..706
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="257952tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>706
                     /note="ultra-conserved element locus uce-1562"
BASE COUNT          269 a          128 c          112 g          197 t
ORIGIN      
        1 tccaactgcc tctttacatt agctaaatga agtcatcagt aaacaaaatt ggaagaaatc
       61 ttaacacaac tgctgtaaac aactttaaaa gttttatatc ccgaaagact agaagtgtta
      121 gaagacagtt cagactcact ggagatgttc accactgata aagtttatag tcaaaactct
      181 ttcatctcac ccaaactgat actggtcaca gcaaattata atcaaagata gatttcttgg
      241 agggtaataa taccattaga tttaaggaat taaaaataca tgaaactttt gagttaatga
      301 acagggtcct taactgctca tttaattcaa acagctgttt gttaatgccc taagcagtgt
      361 cataaactgt gaaaatactg ttgagtgcaa gacactagtt aatgctataa agcaacacat
      421 gctctaatat taaaaggatt taatgggatt aatagagaat aaaacattaa ctccctatta
      481 tgatgttttt gggacccaag ggcaaattct ggctaaaaag gactctggtt ctaaaagcac
      541 aaaaagtaaa ctatagcact gtacagcaaa tcatggcaat tttatgctcc tgaaaaaaag
      601 tggaaccctg ataagatcac atctgttcca atcacagact ggataaaatc actgtttact
      661 aaagtcctaa ataactaaat atgtggaacc ccaacaagat cccatc
//
LOCUS       KCPA01002346             559 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 258057tic ultra-conserved element locus
            uce-3110, sequence.
ACCESSION   KCPA01002346
VERSION     KCPA01002346.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 559)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 559)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="258057tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>559
                     /note="ultra-conserved element locus uce-3110"
BASE COUNT          183 a           95 c          102 g          179 t
ORIGIN      
        1 taagacaagt tatgtttatc agtagcttta actttagggg atctacaaag ggactggttt
       61 gtcagcagaa gacttataag tctccctaac agtatcaaag acattagggg tctctcaatt
      121 gtaggatgct agagttgcac actaaagata gcagacacat gcttcatgga agtagcacta
      181 ctgaaatata aacaagcccc cttcatccag acatttttgg ttatgtttac agattaaatc
      241 tcaggatgtg tatattagat gttcttgttt caggatatta atggcaaaat gaacctgttt
      301 ttgatgttta agtcacatta atgtctgatg gactgttaaa atgttaaagg gtacaccaga
      361 catgctgtag tatgtgacat atgttagtca taccatacta gctaggaatt tggatttgtt
      421 tataatgaac ataaattgac tgaatttaac ccccctctac ctcctccaac agttaaatca
      481 cattaggttc catttcctcc aaaagacagt tttgaaaaat tagatgaaac ttgaaaagca
      541 gttgtattca gatttcaac
//
LOCUS       KCPA01002347             799 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 258267tic ultra-conserved element locus
            uce-1383, sequence.
ACCESSION   KCPA01002347
VERSION     KCPA01002347.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 799)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 799)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..799
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="258267tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>799
                     /note="ultra-conserved element locus uce-1383"
BASE COUNT          222 a          142 c          156 g          279 t
ORIGIN      
        1 cattaaaagt tctctgcctt cctgttagct cagccttgcc catatgacac tgatttacat
       61 gcttgtttac agtttatgag gaagaataaa atgagcatac tggaaaactt ctcattttta
      121 tagtgccagt tgtcatgcta gcatcatttt cagtttactt acctttgcac agtcctctta
      181 tctggtgcta attgttttaa ctgcttaaaa tgtaaacatg tggagatcac cttctcccag
      241 attctaattt tagagaaaga gctgaaacat ttggagctga acacactgtc cctgtttgct
      301 atgtaaagta tgcctcattt ctttgatctt gagtaataat aattctgggg agttatactg
      361 ttttcatatg cttcaaagct gtgtcaaagt tttgctgctt aagggtactt ctttattcta
      421 ttggctcttg ggtactgaga tgacaggtcc tctgtactag gtgcaggctt tttcaagtca
      481 tagccttcag caaaacatca aattaccaaa tacagggtaa catacttcta cacaaatgcc
      541 tttcctgtag atatattata ccatatatat taaatacttt agtgttacat ggtacatttt
      601 atgtgcaata gaaagtgatg gtttgaggta gccttagggg tacttttttc cacaagcaga
      661 aaaagctagt gtataccgta tcaagtatgg tttttacagg actttctgcc cgaaggcctt
      721 tgtaaataag taatgatcaa cagattggct gtgggttttt gaaaagcatg cctgtgtcag
      781 tttgcatgat gggggaaga
//
LOCUS       KCPA01002348             563 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 258373tic ultra-conserved element locus
            uce-5754, sequence.
ACCESSION   KCPA01002348
VERSION     KCPA01002348.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 563)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 563)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="258373tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>563
                     /note="ultra-conserved element locus uce-5754"
BASE COUNT          138 a          151 c          117 g          157 t
ORIGIN      
        1 gtgaatcatg acttccttgt gggatatggt accttttccc actcttggct ccatttccca
       61 taatgccctt gacctcggag gtcacctgtc attggaagat gaagctctga ataaacagag
      121 aagaccctgt ggtgtctctt atctctcggt tttgcctcaa atctccgggc ggagttttaa
      181 attattcatc cagtggtgct ctctgcgagt tacacgtctc cgtcacctgt ttgcttgccc
      241 atttgtgagt gaaggcggta tccttgggaa ccttatcaga gatcacagat tcaggctcca
      301 gaaatgaaat aaaagaggaa gttggctgta ttagcataag aggagtcagc ctggagttga
      361 atacacacat cacccagaag caccactggc ttctcttatc agtaacgtct gatcaccact
      421 tctttcaggc acacatgcac cacactcccc cctctaattc cacccagccc attcctttgt
      481 tccagctcac atgagggaac acacggaata aggtcagatg gcatgagttt cctgaagttt
      541 ccaacactcc caagttctcc ttg
//
LOCUS       KCPA01002349             603 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 258477tic ultra-conserved element locus
            uce-5305, sequence.
ACCESSION   KCPA01002349
VERSION     KCPA01002349.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 603)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 603)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="258477tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>603
                     /note="ultra-conserved element locus uce-5305"
BASE COUNT          203 a           92 c          105 g          203 t
ORIGIN      
        1 attagctgaa tacattaaga gaaggctgga acacagattc tgtaaagaga gcaaatgtat
       61 gtttaatcct ctgttctttg cttacagatt accctttcag aacaagtaac cttattttct
      121 ttttaaatat ctatttttga gctttgcata gcaaagcagg gtttttttta tttccttccc
      181 actgttgcaa aagaaattaa tttgttgcta gttgctatgc attggcagga tttctgcata
      241 aagaatgtaa gccatctatc tttgtattca agatatagtt aatctggcag ttaaaatact
      301 ttggaaacat tttgatgact tatctggaaa agtagctttg cattttcaaa gaaaactcag
      361 aactgtattg caagaggaag ataaaagata tatgaagtgt ttgttccaag cgatactatt
      421 catttaaaga tcagaatgta accccaccca agcaattatt gtggaaaaac aagacaaaaa
      481 tccttataca gcgttctgac acggtcttta tttgggaaac aaaataactg tattacagtt
      541 atagtctaat ggattgcaag ctgttttatt agagtcagct gaatcctgtt tagcataaaa
      601 aag
//
LOCUS       KCPA01002350             662 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 258587tic ultra-conserved element locus
            uce-3720, sequence.
ACCESSION   KCPA01002350
VERSION     KCPA01002350.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 662)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 662)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..662
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="258587tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>662
                     /note="ultra-conserved element locus uce-3720"
BASE COUNT          202 a          113 c          129 g          218 t
ORIGIN      
        1 cctgaacagg ttcattgctg taaggaaaat aagtgtttaa ataggtggtg taacatgata
       61 gatgtaaaag aggcaaatta ttaagcacct taattagtcc ttggtttatt agtgctttga
      121 ataacctgga ttatgacctg taatttgaga ctacacatcc caattcaatc aaaacctctt
      181 tcagtagcat cttaaatagt acccactcat gcagactttc acattaaagt aattatttgt
      241 aagaacagca agaaagttta ctcttcctct ttatagtgaa aacaaatgtg tttttctcca
      301 gaatctgcca aggctgtgtt ttaatgattt aacagatgga gttggcacat gtgaacctgg
      361 aagatgcatc tgtctgattt ttccagtctg aggatttttt aactgcatta atggcacaga
      421 caatggtaaa atatcacctc cccgggctgc tttgctctcc taacacataa tgtcttttaa
      481 gggtgatagg agactggggt gagcaaaagg ccagagaaat gaggatttga aagttgaata
      541 ttttctgtct tcactgcatt aagcttttaa gcctttcact ttgaatttca tgtgtatatg
      601 gtgtggaaac agaaattcta cccaggcaac attatgtgtg atctcgcgtt ctgttaatta
      661 at
//
LOCUS       KCPA01002351             463 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 258694tic ultra-conserved element locus
            uce-5311, sequence.
ACCESSION   KCPA01002351
VERSION     KCPA01002351.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 463)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 463)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="258694tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>463
                     /note="ultra-conserved element locus uce-5311"
BASE COUNT          155 a           80 c           77 g          151 t
ORIGIN      
        1 ttttattcag ttttgaaata cctgcaaagg gcaacctgaa actgaaaaat ggagtaagtg
       61 caatgaggcc tttagaataa ttatgtgttg ttaattgaag aatgttaatc atgtcatatt
      121 aggagggaga gagggttaaa ttggtaaaat ttcaattcac ttaagcctta tctcttggaa
      181 tgaaccagat gattaatcct taatattctt cagggataca gagaacatca gcaattaaat
      241 taacaactac aaagtttatg ctcagagatt caaaaatgaa agacagaaac actttaattt
      301 ttcacaagtt gttaccttaa ttatcttctt attgcttcta tctcttttcc ctcattacaa
      361 aaacccaccc ctccatattc ctggatcctt taatttgctg tagctcggaa actgtgtaag
      421 gaacgtcatc ggagcagcaa atgtcataaa tcttactttg tgc
//
LOCUS       KCPA01002352             525 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 258804tic ultra-conserved element locus
            uce-6140, sequence.
ACCESSION   KCPA01002352
VERSION     KCPA01002352.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 525)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 525)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="258804tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>525
                     /note="ultra-conserved element locus uce-6140"
BASE COUNT          153 a          100 c           86 g          186 t
ORIGIN      
        1 gctttaatcc ctgagtattc acatccctct tgcacttctg tgcctttggt taagtagaga
       61 cagtaactac gtgtccctca gtgactaaaa tgccaaacca cacacgacac cctctttgca
      121 ctccttatta aaattttaca ggtcaaaaat ccaaaaccca cttaataaaa attgttcttc
      181 atcgtaagtg acaagagaga gcaggtcagt ctatggaata atggtgcagt aattagaacc
      241 tttgtagttg ataaagtgtg actgttaatc aatgtttggc taattaatca atattttaat
      301 cattagacct tttaaatttg ttttaatgag catttcctct aattcccttg atcctgttgc
      361 ttctaactct tctattatct ctgttaaaca gcaaagtagg ttcatatacc cagattatgc
      421 tgtggttttg aatgtttgta gtttttggca tgaatatttc tgaatgtgtg caaattcatg
      481 ctcttgtcca tgtttgcatt aagagagaat gagcattcac aactt
//
LOCUS       KCPA01002353             588 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 258913tic ultra-conserved element locus
            uce-5220, sequence.
ACCESSION   KCPA01002353
VERSION     KCPA01002353.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 588)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 588)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..588
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="258913tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>588
                     /note="ultra-conserved element locus uce-5220"
BASE COUNT          198 a          128 c           94 g          168 t
ORIGIN      
        1 actgtagtca cttacactct tacaaaacat gtgataaccc cgatagctta atattcagca
       61 tatataattc atttacatga tatagcactc ttgattgtgg ccctaaaaca gtttttattc
      121 atatctagca gctttctaga tcaaccacaa aaacttctac agccagcaat caaactacgg
      181 aacctccaga aattaaagac ccacaatatt aaaatacaca gaacaaaata tctgaggtat
      241 aagataaaaa atgtaatttt tcctcttttt agagttgcta aaatgatgca ctactgcatg
      301 tattgcaata cccaggcctc ggaaagcttc ctttttcccc acattggaag gtttttatgg
      361 ttttgtcatt tagtatggag caaaacggct gtatccccct cggtatatac tagcctgtaa
      421 tgaagaaaga acgagaccga catcatcagc atggctccta gtcttggcat cagtcaaggg
      481 tgcaaaagca ttctgaaaca aagcaattcg atggattgtt caacaactag atttgcaatt
      541 tcatttgaca tgactactgc cccatcctaa aaggcaagca acgttcag
//
LOCUS       KCPA01002354             774 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 259022tic ultra-conserved element locus
            uce-182, sequence.
ACCESSION   KCPA01002354
VERSION     KCPA01002354.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 774)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 774)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..774
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="259022tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>774
                     /note="ultra-conserved element locus uce-182"
BASE COUNT          219 a          154 c          161 g          240 t
ORIGIN      
        1 gcacttcata atatgtttgc ttgtttggaa aacccatttt acttccagat taaaatgtta
       61 ttgatgagct aagtcaatgc aatgaagtct cctattatga gaacctgaag tatgcaaggg
      121 attaaacatc tttcttctag actgatgatg tgggggggca catggtaatg ctaaaaatgt
      181 ttgaggctgc aaagattaaa taaaggaaca tatcaatttg gagccagtga attacatcca
      241 gctgcgacag tgaattaaga accgattaat ggctaaagct tttctccagt ttggatgccg
      301 aagcaaactc attaagcttt tagagtagct ataatgtgtg tactgtggga actgttcaat
      361 gctattcagg agactttaac tgtaagctca gagcatttcc cgcagagctt ctgatgctat
      421 tttctttata taacatgtgt gcctgaaaat ccagccaaaa acaagccctt tgtttttcta
      481 ctttgttgtg gtctctctca gctttacgtt tcttgaacac aggtaaataa actcataatc
      541 cagatggtgc agcagatgtg agagcagcac tctgaaatca acagacagtg ggcaatactt
      601 tccattttct cttttaaacg ctaactaata tgtaattcgg aatctccggt gtagttagca
      661 tctgctccct tcggccagcc aaaggttaca ggtgttcctg atgtcatttc acagtaaggc
      721 gtgggcctgg cttgtgagtg agtgcccagg ctctaatctt tccctaccac ctac
//
LOCUS       KCPA01002355             637 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 259132tic ultra-conserved element locus
            uce-7069, sequence.
ACCESSION   KCPA01002355
VERSION     KCPA01002355.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 637)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 637)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..637
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="259132tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>637
                     /note="ultra-conserved element locus uce-7069"
BASE COUNT          179 a          124 c          186 g          148 t
ORIGIN      
        1 tgctgctgaa gaggaatcag aagtgggaac aacaagacgg ggaggtagaa agacgctcca
       61 tggccataaa cacctgtcat caccaaaatg gtgttgctca cctgcaccag cagttggaac
      121 ctggggatac ggcatctctg tcaggggcag aatccatgga gggacaccgc tgggtcacgc
      181 tgactagtag ggctcagcga tcaaacgtgt cacacctgtc ttggccacgg gtgcaggtgt
      241 tctaggtcag ctctcgctgt ggttatcaat cgctgacagt tgacagttta attttacacc
      301 acaagtacct cattacttgt gtaggcactt gaagaacatg tgggcactgg gttggatcag
      361 tgatcaatga caaaggttgc gcagggtgca agtggtagca gtaaaagtga aggtctccgt
      421 gcatgagttg gcagtggtgg ggatacatga caaggggagt ttagctgaca aacagtctgt
      481 cagggctgga agaatggagg ctcgccggag agctggtgct ccattataaa atacagctcg
      541 ccatttaaaa gaggagaggg gaaaaaaaaa gggctcttgc tttgaaaaac tgtttaaaca
      601 aatttaatgc atgtgaggga ctgtaaattt ttattct
//
LOCUS       KCPA01002356             687 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 259242tic ultra-conserved element locus
            uce-6892, sequence.
ACCESSION   KCPA01002356
VERSION     KCPA01002356.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 687)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 687)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..687
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="259242tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>687
                     /note="ultra-conserved element locus uce-6892"
BASE COUNT          201 a          145 c          148 g          193 t
ORIGIN      
        1 tgcctttaga gggctttgtg tactcatttt tttcccctag tccaataaaa gatattagct
       61 cttttcccta agcaaaatcc ctctcatgaa tcaggcccta cacttgcaac tagtgtgata
      121 ttgctggcca ggtttcaccc cagtaaaatt ctaatctata ctttgtcttg cagaattaag
      181 aagaaaatgc atatcagcag aatctcctct ctactttatt tcatttataa attacgagaa
      241 tgatgctatt atatattatt aatttctgct gttctccaac tcggctgcag cagtgagctg
      301 cggatgttgg aacggtgtaa ttatgttcta gtagggcagc catccgtttc ctttcaaaaa
      361 tttacaggat tcttaatcat gctgctcatt tgggtgcgca gtagcgagga tggcgaaaca
      421 caaacagggc acgttcgttt acacaggaac acctgcttag catgatagca gatgtcagtc
      481 agcaagcaga acacaaaaga aaaatatcaa caacagcaaa ctagaagcat ttttaactcg
      541 gtacggagat ctctcgtctg ggggaagcca aaggacgggg atgcgccttt gcaggtcgaa
      601 gcagaggcac ggtgatgatt tggaaaatct cagccaatgt tccgggtcaa caaatccaag
      661 acaaactgct cgttggatga tgggatg
//
LOCUS       KCPA01002357             364 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 259335tic ultra-conserved element locus
            uce-1393, sequence.
ACCESSION   KCPA01002357
VERSION     KCPA01002357.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 364)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 364)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="259335tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>364
                     /note="ultra-conserved element locus uce-1393"
BASE COUNT          104 a           70 c           94 g           96 t
ORIGIN      
        1 cctaggtaga ccaggttgtc caattgttct ctggtgaggt ggatgttata tgtgggccct
       61 ctcttttgac ctgttgactg cagcaaatgg tcaatctcgt cacgcaccgc tgcaagagct
      121 tctgggtgcc gcagaagata atacatggcc cagaatgtag ctggaatcgt gtttcccaca
      181 gaggcccaca ggaaggcaaa atgatgtgct gggagaaaat aagtgaaaag gaagattaat
      241 agcgtttatt acactgatta gatttgcagt gtgctaatta aaagatgtta ggacacagac
      301 ccagccaagg atcagtgaat gctaatgagg accaataggc ttctgaagtc taattttctg
      361 ctta
//
LOCUS       KCPA01002358             389 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 259437tic ultra-conserved element locus
            uce-4169, sequence.
ACCESSION   KCPA01002358
VERSION     KCPA01002358.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 389)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 389)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="259437tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>389
                     /note="ultra-conserved element locus uce-4169"
BASE COUNT          149 a           78 c           75 g           87 t
ORIGIN      
        1 tttaaagcaa ttacattttg gttaataccg agccacaatt gttagcccaa cacccacaca
       61 atctgtacaa gctacagcaa aatgaataca cccagcagag cccttatctg ttgtggcacc
      121 aacagaaagg ggactggcca atttaccttc atcagcctca atagcctcaa cagtagctga
      181 agagaagaaa ggggtagcaa aacgaatgag aaaaatgagc agaggatttc aactctaaga
      241 acaagtcagt gaatagcaaa ggagctacac taatgttact gtaagtgctg gattttggca
      301 gaacagacac acagagaaat gtttacacaa aaacagtaat tcgcagatta aattaagcta
      361 gaatttcttt taaagcagaa gtttcacaa
//
LOCUS       KCPA01002359             505 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 259543tic ultra-conserved element locus
            uce-5640, sequence.
ACCESSION   KCPA01002359
VERSION     KCPA01002359.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 505)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 505)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="259543tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>505
                     /note="ultra-conserved element locus uce-5640"
BASE COUNT          131 a          130 c          142 g          102 t
ORIGIN      
        1 cagcagtttt gctttcacaa caggggtccc gccatggcga tgtatcttga cggagtgaaa
       61 gaaaacactc tgcgatgcca ttaacatttc tgagtcacaa gggattaaaa ggtttggact
      121 cggggcagat gctgggagag ccctcggcag aggagttcac cgcccgccga aggctgcagc
      181 tgcgagggat tgacaccgct gacggtggaa cccggctcgg gagaaactcc gggcacagtt
      241 ccggcatccg aaataaatta aagtaaacag tgttgctctc tctcatccac cctgttagca
      301 gcctctcggt tgagcgggag accacacacc cagaccacac agcaccagct gaactcactc
      361 gcacgcaaca tctagaagct gtcactctgc tgaggcatga ggaggggggg gccgcagtgc
      421 gagagaaaag ctgcttgctc tctcctccta tcattacagc tggttatgtt ttgtgtgaaa
      481 gaaggaaggg ataaggacct ataaa
//
LOCUS       KCPA01002360             553 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 259649tic ultra-conserved element locus
            uce-2893, sequence.
ACCESSION   KCPA01002360
VERSION     KCPA01002360.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 553)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 553)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..553
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="259649tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>553
                     /note="ultra-conserved element locus uce-2893"
BASE COUNT          167 a          111 c           71 g          204 t
ORIGIN      
        1 attactatta ttattattag tttatgtatt tctactgcta tttttagtag ggaaaagttt
       61 taactgtttt tataatttga gaacctttaa tgaaaatgta aatattaata ctataattat
      121 tttttttgta acttgcatgt tgaagaagtt gcagcttagg gtttgtgaga ttgtcaatgt
      181 tagagttctg ttctttcttt ttgttgatgg gcatgaatat gctcatttgt ttttgtatat
      241 tgcccatccc ttccttacag ccagaagctc taatgctgct agatcactcc gtaccgccct
      301 tacatggaca tggcaactga cttacacttt cactcccatc atcttcatct cctgtgtagt
      361 acactcatag aacactccca ctccatacac cctaagcatt ttttcttccc ataagttccc
      421 cttcaccacc cctttcttta gcattgttaa aattttatgt gcagtcatcc attccttaaa
      481 acacacacac aaaaattata gaaagaaaat gtttaaaaaa atatatatca aattgaccaa
      541 aaaagcaaca aac
//
LOCUS       KCPA01002361             410 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 259747tic ultra-conserved element locus
            uce-2041, sequence.
ACCESSION   KCPA01002361
VERSION     KCPA01002361.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 410)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 410)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="259747tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>410
                     /note="ultra-conserved element locus uce-2041"
BASE COUNT          132 a           67 c           80 g          131 t
ORIGIN      
        1 gaattagtca ttctaaatca tgcagctgtg gtcgaaggga gctcttctaa aaatcattaa
       61 acaatcatgt attcctattg atttattcaa aataccttca gggaaagcag attaaacaca
      121 aggtaaaagt aaactaatgc agattaaatg gatgaaggat gggccgatag ttccctaggc
      181 agttttttta ctaatgagag gaaaattgta tgtacactat taccagtata aaagggtcta
      241 ttagaggtct tttgcttgac atatttatgt atttcaaata ctaagtagca cagtgaatta
      301 ggtttactct ggacatttgt tatttttatt gcatctccaa gtgataaaca gggctttctc
      361 ttgagggcag cacactgctt ttctcaggag gcacaaccct atctgcatag
//
LOCUS       KCPA01002362             464 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 259853tic ultra-conserved element locus
            uce-3324, sequence.
ACCESSION   KCPA01002362
VERSION     KCPA01002362.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 464)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 464)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="259853tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>464
                     /note="ultra-conserved element locus uce-3324"
BASE COUNT          167 a           79 c           80 g          138 t
ORIGIN      
        1 tatttcagtc aaaatacagt caaattgaac ttaaccacag atgtatgaat acggcagatt
       61 tggtattgat attgattttc cagtaaatca tcttaagttc aaatgatcaa aaatcaagac
      121 aggtcaacat caaagaaaca ggaatattgg catgaaagca aggtctcttg attggtacaa
      181 attaaaagat catttattag tgattatgct gtataatact gccagtgcca aatgaatgca
      241 attaagatga aatgggcccc tgcagctaca ggggttaata aagactgaat tcctaatgat
      301 ttttccatta attatgaaga tgtccacaaa acagctttaa caaagctgtg gccacctccg
      361 acaaatcttt gtaatctgta taaaatgcct cccttaattg acatgttgtt gggataatgt
      421 aaagatttaa cagctcctaa atcattactc accgaagggt attc
//
LOCUS       KCPA01002363             470 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 259959tic ultra-conserved element locus
            uce-6334, sequence.
ACCESSION   KCPA01002363
VERSION     KCPA01002363.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 470)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 470)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="259959tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>470
                     /note="ultra-conserved element locus uce-6334"
BASE COUNT          160 a           86 c           72 g          152 t
ORIGIN      
        1 aaaacacttt tcccctagta aggaagtgtg ataaaaaaca ttctttcatc tagcatttga
       61 tactcaaatg cactttccca ttcacagttg gatggagatt ttttttcaag tccaacccta
      121 atttatttat cttaaagcag gcaatgtact gtaattttac aataaaggac tcccaatcaa
      181 agcttacctt atccagaggt aattaataca aagattgttg aattaaagat gtgagtcttg
      241 acactttggc ggggggtaag ggacatggtc tcaaaggcac aaattatgcc tgaaacagac
      301 caattaacac catgtatctt cttttatgtt aacttcaatt aaggtttctt aaaattttta
      361 aagttatttt cttctttaca atctcagaat gtcagaaatg tacatcaaag aaaaacgctt
      421 cagtatgaac accataggta acgctcattt gcacacaaat ctgcatattg
//
LOCUS       KCPA01002364             483 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 260066tic ultra-conserved element locus
            uce-1653, sequence.
ACCESSION   KCPA01002364
VERSION     KCPA01002364.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 483)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 483)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="260066tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>483
                     /note="ultra-conserved element locus uce-1653"
BASE COUNT          176 a           80 c           85 g          142 t
ORIGIN      
        1 aaaaaaacaa cttactgaat aatatgccaa accacatgtg taaaggaata aaatggaata
       61 gttaacattc agctccatgc cattcatttc cccctaaaat gtaatgataa ttagatgggt
      121 cataaaatgc tcttcttttc attatgactg atgaaatgca ttaaagctga cagggtatta
      181 cctgacagta attaggtttt gtcatgaatt aaattatttg aaagcaggct atctccccaa
      241 tcatgcaatt tacagcaagt ttttttttaa tctgtgctac agaagagaga aagagagata
      301 gaaaatagca gtttttctct tcataatcat atgaattatt cacagaaaaa aatcgtgcag
      361 atgaagaggc ttgccactta atgtactgca cagatgtgat catcagcggt tgccgacaat
      421 gaaatataca agtgcacaca aaagtgatct ggtgaacaag aggtggaatt taatcatctt
      481 ctc
//
LOCUS       KCPA01002365             641 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 260175tic ultra-conserved element locus
            uce-7215, sequence.
ACCESSION   KCPA01002365
VERSION     KCPA01002365.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 641)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 641)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..641
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="260175tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>641
                     /note="ultra-conserved element locus uce-7215"
BASE COUNT          165 a          128 c          132 g          216 t
ORIGIN      
        1 aacaaatgtc atgcactttt taactcgtga gcacaagaga cagcgtaaat gtaagctggg
       61 ctatgatttc agggaaggta tctgtgaatg cagaaaatat gcagaagagc aactgatttt
      121 catttgctgt cttagtagaa cgatgttctc tgtattccca acaataaaag caacagcaag
      181 gaaaataagt tggctcccct ctgcccaagt cattatttca agtttctcag cattaaatct
      241 aaaggttcat caactcacat ctttacagct ctgtctttct gtatacagga ccctgtctgc
      301 ctgtttcctc tattgcacta ttttgtttgt actactgtaa tcattttgct ggcccagatc
      361 tgtgtgggtg tgctggcagc tttacaacaa agttacatgg gaactgagtt aaggttgaat
      421 atttattaga agaagccatc tggcgtcagg ctgtctgtac ggggggctta tttctttagt
      481 agtctctcct ttttctttct agctcttccg tttctcattt atgtgctgtg aaaagtggaa
      541 cacacatctt gacatattga tttgattctt gatatttata gcaattaacg ctcatgtgac
      601 tgtctcctca gttcccatgg tggcaaggat gctgcagggt t
//
LOCUS       KCPA01002366             470 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 260283tic ultra-conserved element locus
            uce-2297, sequence.
ACCESSION   KCPA01002366
VERSION     KCPA01002366.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 470)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 470)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="260283tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>470
                     /note="ultra-conserved element locus uce-2297"
BASE COUNT          145 a           76 c           89 g          160 t
ORIGIN      
        1 ctttttggct attaaaggct cattaaaaaa attaaagtcc cacaatttac aatattttcc
       61 attgaaatac catgttaaca catttcttta atcagtgtgt aactgtcagg ggaaagaaca
      121 attcatctag tatatgcata cattaggaaa aaaaattatc agatttaatt ttatttgttt
      181 tatattcagg gcgaaggaat tcctgcaggg aaatggttaa tctattttta actaaagctt
      241 acttttgtaa tctatccagt gcttagagtt ctgtcattga tctatgattt atgtgattta
      301 aaccacctct tggctgtaac attggtttct atccaagatg ctgagctgaa tactaattac
      361 gagatcaaat ttatgctgtt gggctaagca gctgaaggag ctttccatgc aggactccct
      421 taaaccacgc caccgttgag cattagtgga atatttggga gggggatggg
//
LOCUS       KCPA01002367             508 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 260392tic ultra-conserved element locus
            uce-2257, sequence.
ACCESSION   KCPA01002367
VERSION     KCPA01002367.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 508)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 508)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="260392tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>508
                     /note="ultra-conserved element locus uce-2257"
BASE COUNT          171 a           80 c          103 g          154 t
ORIGIN      
        1 gagctatgtt aagcagtctt gaccagtgcc tacatatata tgacattgtc ccatcatttt
       61 caaatcaaaa ttttttaaat agaaaggtaa acagagagac aaagaattga ctgttgagaa
      121 ggctcttaga aaattgaaac aggagggaat ggcatgcaga gaaaaatgca agttcacaca
      181 ccaaagttag aggatttggg attaattgaa atcctcaagt ggtgcatggt aagtgactgc
      241 ctatttagag ccaatagata ggtttccgtg aggttaagga agcgaaaaat cccatacgaa
      301 gctagtgaga tgttaaattc taattagaag tgttaattca tttccaattt catcagtgag
      361 agtgcttttg ttgttctgat tctctttgct acagtgaatc ctaagtatcc taactcattt
      421 tgtcccaata ttatttacca cttctatagg gtataaaaaa gttgactatg actatagaag
      481 cagggattat tacagtggca ccttctac
//
LOCUS       KCPA01002368             594 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 260503tic ultra-conserved element locus
            uce-1159, sequence.
ACCESSION   KCPA01002368
VERSION     KCPA01002368.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 594)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 594)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="260503tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>594
                     /note="ultra-conserved element locus uce-1159"
BASE COUNT          178 a          113 c          122 g          181 t
ORIGIN      
        1 catctgttca gtctacgaat tcattacttt tggcatctaa ttactccctt tatttgcatt
       61 attgatttcc attacccagt gggtaggaag tgcttgaaac atctagaggg acagaactct
      121 ttaaattctc tgaagttagg agatggatgt ggcaagagtg tgtagtagag ggaggtagta
      181 tgagtaggaa gctactattg acattgttct gttgcagcaa ttttagatgg acaaattgca
      241 gttgagaaaa tttcatgact cggtaaaatg agcaatgatg acatctgtgg atgcaggtct
      301 gttcatatct ttgcagagcc tttagggaaa taaatatctc ggaacattcg gtgaagtgaa
      361 gctcactcaa taaatcaacc tgacacaata acacttctgg cacatgagct ctacttctcc
      421 tcagcaccac ctacccctct gtgttcctat gctaccaaat ggtgtctccc cacaggcctc
      481 taaatcaaat cagagcacac aaatacagtg agaatttatt gggaattggt tttgttcggc
      541 aaaaacatta cttattagat gaactgaaat gataaatttt gaccctttaa gtgc
//
LOCUS       KCPA01002369             541 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 260616tic ultra-conserved element locus
            uce-3486, sequence.
ACCESSION   KCPA01002369
VERSION     KCPA01002369.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 541)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 541)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..541
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="260616tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>541
                     /note="ultra-conserved element locus uce-3486"
BASE COUNT          159 a          109 c          102 g          171 t
ORIGIN      
        1 cccctgcctt tacaaatact aaggaaagag gagtgcactg tgctttaaag gatatacaat
       61 caggaaataa aatgagatgt tagctctctt ccacctaatc cttcgccatc ccttcaaaat
      121 tactgttgac taacaagttg tgtctctttt ctctgaggca gtgggtgcaa gacaactact
      181 tgagacaaga gaggaacatt tatcctccag gcttctcata cttactcaag cagaaagact
      241 ctgcatgggg agaaggttct ttacagcatt ccacattttt aatgagcttc cttgcaaagg
      301 gtatgggctt tccctttttt cagctaaagc ttctactcaa agagggattt gttctcatta
      361 agaagggaat gttaagggat gatagtttaa ggtgttcgca tactgctgtt taatcacctt
      421 tatgacaaag attatactat gctaaaagct accccatatt agacagccta ccaaatacaa
      481 gtttgcagtg catttttttt aatctcttgt ttattagaac cctttgaagg gtcaatgtca
      541 t
//
LOCUS       KCPA01002370             578 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 260723tic ultra-conserved element locus
            uce-7895, sequence.
ACCESSION   KCPA01002370
VERSION     KCPA01002370.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 578)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 578)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="260723tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>578
                     /note="ultra-conserved element locus uce-7895"
BASE COUNT          157 a           94 c          102 g          225 t
ORIGIN      
        1 aaatttcaat cgagaaaaaa taaatgtggc tcttttctgt caatattttc tgtctccatg
       61 ggttttgtgt taaactcctg tacagaggga ttgtgtgtta ttgataacgt gggactggac
      121 ttggtggatt ttaatgtcca tgtttatatg gaacattttt gaagcagcaa ttaaaataat
      181 taaggagggt gaagaaatct ttagcatgca acaaagattt ctgcaaaatg ttaatttctg
      241 tcaaataagt gaatatatgc acagatgcct cctgacagag gctgtgattt ctgagtgctt
      301 tgcatgccaa ataacttgtt taccccctca atgtttgcca agtttactgt caatttacaa
      361 ataatttcca ttttgctgtt tattctgctg ccttttgatg gatatgtctt ccagactttt
      421 atcttgcatg tagacaaact aattaatatt ttcccttcag gcaaatattt ttttcttaga
      481 tctaaatgtg ggttagattc ttcttcgttt ccatatgctt tgttctgtca atcacttctc
      541 ttctatgtta ctaaaaatgt acctttgtgg atgtcatt
//
LOCUS       KCPA01002371             587 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 260831tic ultra-conserved element locus
            uce-1642, sequence.
ACCESSION   KCPA01002371
VERSION     KCPA01002371.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 587)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 587)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..587
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="260831tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>587
                     /note="ultra-conserved element locus uce-1642"
BASE COUNT          182 a          117 c           93 g          195 t
ORIGIN      
        1 aatcgtcctg cactaaccac tcagataaga aaagattttt tacttgttta cgttttagtg
       61 atactccatg cctgtatatt taagaaaagg aaaagtgctg tttgcattga tacactcaag
      121 tcttagaaac ccattcaatt tatctatgca gcttttatta gaccagactg tagactacaa
      181 taatagtcaa tgaggttttg tcttgattga atttttcagt agaacacaaa agaaccttgc
      241 cattaaaata gtcctttatt ctcttgtatg aaggcgaaag gtttttaaag tgttgtgatg
      301 ttcagtaatg agcctctatc taaattatca ttggtgacaa actcacaaag cacttttcga
      361 ggacacatag ttatgaaatg ccagagctgc cactttcttt cctgtaatta taggctagct
      421 tgcagccctt caatgatcat ttatagaaca gcctccagtg gattactgag aacttgaaaa
      481 acacatacat acctctgcca catctccctt tcctcgctat tgtttaccag tgatatgtaa
      541 aataatagtg cctattcatt cctcctgctt aattatgcca atcaaag
//
LOCUS       KCPA01002372             710 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 260941tic ultra-conserved element locus
            uce-2246, sequence.
ACCESSION   KCPA01002372
VERSION     KCPA01002372.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 710)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 710)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..710
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="260941tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>710
                     /note="ultra-conserved element locus uce-2246"
BASE COUNT          194 a          155 c          160 g          201 t
ORIGIN      
        1 cttgcccctt cccttgcgct gctcttcaga tttcagactc ttctgaaata actcatcgct
       61 gaactgggac ctttcctctc cattggtcag gccccgtgtc aaaacactcc cgactcctgg
      121 gaagtcagct ctgctgaatc ccgagccttg ccagtgccag tcagctgctg tttgaacgaa
      181 gtcctgaccg caaaatcaaa agtgggtcca aagaaagctg taaacagtgt gcaatgagcc
      241 atttgaaggc agctgatgcc tcatttgggg tgacatgttg tggctgatga gtgtggatga
      301 tgtggggttt tcgataagtg cctcatcagt atcctcatca tgatcgtgtt gctcagccac
      361 ggcgtgtgcc ctgacttgat tgtaattgcc tgaatctgct cctgctgctc aggagcgcac
      421 agtaatatgc aataaaacag caagaagtga atgttaacca tctgagttct gacatggctg
      481 cttgcagttc aagttttcca ttaaggacaa aaaaatctat atagacatac aaatatggat
      541 atataattgc atgtttagaa taattattgt ttgtatatgc aataaactca ttttataaat
      601 aatgcatgat ggtgatacat agtttgacat acatcttccc ctgacacctg tgtacaagtg
      661 aatatcacat gctgatggtg tgagagcaga gggatgaaaa gcaccaggac
//
LOCUS       KCPA01002373             726 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 261051tic ultra-conserved element locus
            uce-6298, sequence.
ACCESSION   KCPA01002373
VERSION     KCPA01002373.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 726)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 726)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..726
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="261051tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>726
                     /note="ultra-conserved element locus uce-6298"
BASE COUNT          206 a          137 c          147 g          236 t
ORIGIN      
        1 aaaaaaggca gagacggccg aaggctgggc tgggagaagc ccaccgatcc ctgagtcata
       61 aaagcgtaca atgaaagggc tttattgtct ctcgttaagc agttcataag tgaccccgtt
      121 tatttctgaa tagccatgtt ttgatgactt atagtatatg caaaaacaaa ctttcccgcg
      181 gtgttttttt tctccgtcat gcttttcttt tcaaaaagcc agatgatttt aaaaagaaaa
      241 acacccagaa atgataaatc gcgtcgcata gctaatggct ggagggcgcg tttaccaatt
      301 cataatcatt tattcttggt gatgtatgac ccttactctt aaatctcaaa agcttctatt
      361 tgaaggtgta aatagctttc ccccttgcag taaaccttac tgcattagca gtgattgatc
      421 tcctgtacaa ttcgtcccag agtgctattt tagaagggga acactggctt ttggagatta
      481 actggggagt ctgttacata ttaatgaacc taggagatat actaacgttt tggtaattta
      541 gttatttgtg tctatagctt tcgccgttat tttctcttag acccccgcgg ttgttataca
      601 tcgaattaaa aagtggtcct tcagcatcat tttttcagtg gcaactaaat gccatttaat
      661 gtgaaaaaca aatgttgact tgtctcttga aggaagtgtg tttcttggca agacatcaaa
      721 gtgttt
//
LOCUS       KCPA01002374             522 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 261157tic ultra-conserved element locus
            uce-6280, sequence.
ACCESSION   KCPA01002374
VERSION     KCPA01002374.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 522)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 522)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="261157tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>522
                     /note="ultra-conserved element locus uce-6280"
BASE COUNT          196 a           73 c           90 g          163 t
ORIGIN      
        1 tgtttatttt gaaatttatg atcaaggtgc tatagatcat atcagtgtat aggaatagat
       61 aaaacagtgc tgcattgaac tttaaataga aatactaaac aaaatgctac aatatgatcc
      121 aactatcaaa caaatcaaat ctatgtttca tgtgagaaaa tacaatgaag tccaaatatt
      181 atggggaaaa aaaggcattt ttgtttcact aaggtgtaca tgctaaataa tcaaaggatt
      241 caacatgaca atatggttat agatagttat cttaagtgtc ttctgtggtg aggaaccgaa
      301 attaagaact tgaacaaaac atgatacatg aaagtgcagg ttctacaaac actgggttgc
      361 ttattaaaac tactttgatc cctcgtttct ttgatatcct aggtcttata aagaattcac
      421 tttcaggggt aaatataggt agttcagaga gactttatga catactgtac atactcagag
      481 acacttttta attacttaat gcagcaagag aaaaatgctg at
//
LOCUS       KCPA01002375             669 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 261267tic ultra-conserved element locus
            uce-5573, sequence.
ACCESSION   KCPA01002375
VERSION     KCPA01002375.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 669)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 669)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..669
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="261267tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>669
                     /note="ultra-conserved element locus uce-5573"
BASE COUNT          208 a          106 c          118 g          237 t
ORIGIN      
        1 gggaatactg acacgtcaat aacataatcc atatttttat tttcatcttt ccagcatttt
       61 aaaggttaat tatgctttcc tgacttgtag cttccttttt ggctgtgata cacagtgcca
      121 gaaccatgta gaataaatgg ccaattttgt ccattgtaca caaatttgtt acaaataact
      181 gagctgggaa tgcattaggc aacattcata atatataacc cacagctttc gtttttatga
      241 tttagtgata tttcaagata tttgtaaatg tgaagattgt ttctgccata tgtagccact
      301 tcattttaat ttgccagtgt cagtaattca gaagaataaa ggaacatttt gtactgcatg
      361 caaacagatc ctcaggtgct tgcgataaaa cttaatagcc accatcttta cttgtagtca
      421 ttgtaagcaa tttcgtcaga atgggcaata ttttttaatt taaaagattc aggagattta
      481 gcaactctgt attgccatat atatttagaa tactgatttt gtcagttttg agcttataaa
      541 tcttggtcct ttgatctcca gtcattttga caagacagaa aatagcatct tggagtaaat
      601 tggaacagta tagaaatacg tttgggattt atattaacaa tgattgctgc agggatgagg
      661 ccattatgg
//
LOCUS       KCPA01002376             636 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 261379tic ultra-conserved element locus
            uce-1746, sequence.
ACCESSION   KCPA01002376
VERSION     KCPA01002376.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 636)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 636)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="261379tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>636
                     /note="ultra-conserved element locus uce-1746"
BASE COUNT          210 a          117 c          114 g          195 t
ORIGIN      
        1 atccaaaaat gagatgcaac atatttacat ttttatttga tgaagcctgt tcctgctatc
       61 tttgttctta atttggtctc aaaagaatta gtagtaagag gaaaaatagt ctgtaaatat
      121 gtatgaaatc aaatttagag ggtaggctaa aaggtattga ctgccagcag tgctaaacag
      181 caggaggcaa aatttcctcc atagttttct tcttggctgg aaacacattg ccttccatct
      241 agattattta atcctcaaaa tgcacatcaa agcttctcat cgggtggtgt atgtctttac
      301 aggcagttga atgtcaaaga tctagcttaa agaaaaaatg taaaacataa tagatcccag
      361 ataataacac agcagtgaag ctcctctact attccttcca gcaaaggact ggtattgcag
      421 gttgtagcta atccttgtgg caaaagtgca aatttcctgc atgagaattt gtgacacccc
      481 tgatagaaat aaaatgatcg agtcatgtta ctggactgat attagcttgt taacaattcc
      541 cttttctctt tacacttgtg gcttgccaga acaataagct atgacttatc tcactcctcc
      601 agcccaattg aaaaatgaat gcaaaatatg tatgaa
//
LOCUS       KCPA01002377             606 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 261489tic ultra-conserved element locus
            uce-2960, sequence.
ACCESSION   KCPA01002377
VERSION     KCPA01002377.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 606)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 606)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="261489tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>606
                     /note="ultra-conserved element locus uce-2960"
BASE COUNT          204 a           99 c           98 g          205 t
ORIGIN      
        1 ataaaattca gctgaaactt ataccagtaa aaccattttt cccattatat tagggttatt
       61 taaaaagttt caaagacgta acattttctc aatccttaaa atactgcgat tctcctgcaa
      121 aactttctgt cataatacca agctccattt tgcattaatt cacctagtag ccagttcagg
      181 ttctctttac ctggtacggt gtacttcact gaattgtttt gtcagatgct gtcaagccaa
      241 cctaccattg ttaaagaaaa tcaaactaaa tcattttggc atgagccttc taggagtaag
      301 gcacagaata tgaagggttt gatgaaatca aggatttgat ttcaatattg taaaagactg
      361 cctgtcaaaa atgtattaca ttctttcaaa caattttgaa tgaatatatg tgtttaaaat
      421 tgtgacagta caatttagct aaagttttgg aagagtattt ttaaattata ataacttgag
      481 gtgaaacaat acctggagag ctcctatttg aaccctctga atcttagtgg tacaccagac
      541 tgaaatcaag tgatcaattt tatggaattt cagaacatct tgtgtgtgga agaatttaat
      601 ttgaac
//
LOCUS       KCPA01002378             587 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 261587tic ultra-conserved element locus
            uce-3874, sequence.
ACCESSION   KCPA01002378
VERSION     KCPA01002378.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 587)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 587)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..587
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="261587tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>587
                     /note="ultra-conserved element locus uce-3874"
BASE COUNT          150 a          156 c          126 g          155 t
ORIGIN      
        1 tatttcgcag tgctgggcag gaaaagcagc ctgcactttc catgccttct gttttaatga
       61 agtgcccatc agttccgtgc agagccagcc cctggctatc cacggcacca gggctccttt
      121 taaacacact tcacctgcaa tcacaccggg cacggagctg tgcctccggt gaaggaatgg
      181 gcaggattgc tttacatctg cactttcatt gaaaacattt atttaatcaa agggaaaaat
      241 aaatgcggtc cctctgctct gtcaagtata aactgttatt gatcccctaa atgaaatttg
      301 tccatgctga tcgatcaaac acattatcct tttcccccag tccattacca gcaattggaa
      361 agtctcaagc atcaatagca acttgaccac acacagctgc atgttcagcc tgttctccaa
      421 atcgaatcat tcctgtcgcc ttcccctctg aacaccggga tctcagcatt ataaccacaa
      481 gctgacgggt aggaggtcta aatttcatga agtgatcggt tgtgttgtgt tgaactccag
      541 cgctgtggta atggccgtgt agcagtgggg actgcaccag tgcccag
//
LOCUS       KCPA01002379             632 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 261696tic ultra-conserved element locus
            uce-7202, sequence.
ACCESSION   KCPA01002379
VERSION     KCPA01002379.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 632)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 632)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..632
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="261696tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>632
                     /note="ultra-conserved element locus uce-7202"
BASE COUNT          185 a          120 c          130 g          197 t
ORIGIN      
        1 gggtgaaatg aatttcctcg caacttatta catgatccct gccgaaatac atttctctga
       61 caagggcatg aagattcctt tcagagccac agagctgtgc tactatagcc tccacacttt
      121 catcagtcta aattatttga taaaatttaa ttagtctaat caaaaggctc agcagttttt
      181 gtaacttctc aagaaagagg aaaggcagtg ctttgtttac ttccagtgtt gctcctgacg
      241 catgaagaca caccaaaata actgctgttt attttacaag atggaaaaaa tattgaacgc
      301 cctctggtta tagaagccat tttcttttgg gattacaagt gcagagatga attaggtaca
      361 cttaggatca atatctgttt ctctgctcgg ctcaagatgg gatttgtcaa aattcgagag
      421 cagcttctat tgagtgtcag ctacaaatcc ttccagtact gagttgtata ctcattgaaa
      481 gttgaaatat aaatggcaaa gggctttctc agctacaatg tccgaggtca caatggtaga
      541 tcacctcttt ttaatgagct ttggtttgat gaagtgacct tgcaggtctg gaatctaagg
      601 atgtaacggg actttacaag ctctggctgt gt
//
LOCUS       KCPA01002380             394 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 261798tic ultra-conserved element locus
            uce-6461, sequence.
ACCESSION   KCPA01002380
VERSION     KCPA01002380.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 394)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 394)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..394
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="261798tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>394
                     /note="ultra-conserved element locus uce-6461"
BASE COUNT           87 a          126 c          101 g           80 t
ORIGIN      
        1 atggcggcgc ggccccggcg ctgcgccctc cccggccaat gggagccggc gctggctctc
       61 gttaatgatg cagcagtcca gggaagacta tcacatgtga gctggccgcc tgccagcatg
      121 gagacaccga gagagcaagg taaacaactt tccaacgcca aaatgatgac atttaatccc
      181 taaatgctgg cttcccggct cgactcatct ttaacccctt tcagctggtg tggaagcgtc
      241 tggaaggcac ccgtctacct gtccccagtg cttttaaaaa ctggacgacg tgccctgcaa
      301 tgatcactgc gtcaccgttt gccactttgc gaactacgca gtgacaaacc tctgagctcc
      361 gaatcgcagg gcgcctgtta acccctgcac cgac
//
LOCUS       KCPA01002381             516 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 261902tic ultra-conserved element locus
            uce-4305, sequence.
ACCESSION   KCPA01002381
VERSION     KCPA01002381.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 516)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 516)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="261902tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>516
                     /note="ultra-conserved element locus uce-4305"
BASE COUNT          177 a           55 c          108 g          176 t
ORIGIN      
        1 tggaatgcca aggatgttat tttccatttg ctggtggaac tccttggggt tgtaaagaag
       61 aaaaaatgtt ttagaggtct aaatataaag gaatgcattt ttaacgtatt gtgtcattaa
      121 gaaatttagg agcttttaga cagattgtga aagtagcaga aaatgagatg cagtgttgca
      181 ttaggtatgt ttttagtatt ttcttctttt tgtaaaagct gtaattttca gagtttagaa
      241 ccaatttaat gtccctggag ctaaagcttt tttgtatcca ttgtccatta ggtgaattgc
      301 taagccaaga atggaatcca tttataatgt ataaaatata gtaaaatgct taaaaaacag
      361 tctaggtagg aaagaaacat caggagtcca ttaaatttga agacagtgag ttctgaggtc
      421 cgtcttataa tcagataatg gggttttgtg cttaagaggc attagataca ggaagattta
      481 tttaaaagtt tgaattcaat aaaaatttat acagaa
//
LOCUS       KCPA01002382             565 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 262012tic ultra-conserved element locus
            uce-5980, sequence.
ACCESSION   KCPA01002382
VERSION     KCPA01002382.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 565)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 565)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..565
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="262012tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>565
                     /note="ultra-conserved element locus uce-5980"
BASE COUNT          183 a          122 c          108 g          152 t
ORIGIN      
        1 gcttatgagg tagttcctgt cttcagatgt ggatatatag gcaatattaa gtatgctgtt
       61 taatactgta cacttatatt cattaccact cagaataata aaaacttctc attttacagt
      121 tatttactgc tgaacatcag cccaggtgaa agaactccca gttcactccc gtatataatc
      181 tcaggttctg tcattcacat gtagaaaact cagctctcta tttagcagag ggttggtgaa
      241 agatagacat ttacagggcc cctctgccct tgagctgttc cattagtgca tggaaagcac
      301 cttgcagcct gtgacaagcg cagcagatcg gcactaaatc aaaaatcagt gccagccagg
      361 gatctaagcc accatgaagg tcacagccat cagctgcatg ccatctcaat ccaaacaaaa
      421 cacactggat acagggggat tttcactact cacaatagga gacaaacaca tcatgttaga
      481 gtaatctcct gatagcagca aaatgggtaa ctgacctttt aaatactttt gagtatttaa
      541 taaaagtttg aagacaggga aaaga
//
LOCUS       KCPA01002383             611 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 262123tic ultra-conserved element locus
            uce-1381, sequence.
ACCESSION   KCPA01002383
VERSION     KCPA01002383.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 611)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 611)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..611
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="262123tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>611
                     /note="ultra-conserved element locus uce-1381"
BASE COUNT          207 a           85 c          111 g          208 t
ORIGIN      
        1 aataccagtc tgaaagtata tattttcagt ggtgtgagaa ctgtattatt gtaatgaggt
       61 agcattttat ttccccatgc gaaacactga tggaaatcac aataaataaa tgcgatgtca
      121 ggttaaaaaa tgttgtagtt tcatgttgtt ggtttgcaaa ttgaattttt acataaaatt
      181 tacactaaat ggaacctcat tatacagtga tgaggtccag tatgatccaa atcgttaaaa
      241 tcactgtact gcttaatgat tcactaagtg gtactgcagt gccataaatt tagtactagt
      301 ttcatgattc aaaacaccag actgagacac cagcaaatcg tatgtggatc attaaattta
      361 caatgaatgt cagagatgaa ataaggggga aaaaacactt tgagagatag ggataatatg
      421 tgctctaagg tgacatccat caagataaat gatcttatac cacttctgct tggataataa
      481 tggggggttg tttttttgtt attcttcatt tcataatttc caaaggagaa agactaagcc
      541 ttttaagaat taaagtatct gtcattttct gagtaccttg tgatctattt tatttgtatt
      601 tatacaatat a
//
LOCUS       KCPA01002384             651 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 262231tic ultra-conserved element locus
            uce-5873, sequence.
ACCESSION   KCPA01002384
VERSION     KCPA01002384.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 651)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 651)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="262231tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>651
                     /note="ultra-conserved element locus uce-5873"
BASE COUNT          247 a          109 c          107 g          188 t
ORIGIN      
        1 ctcctgcttt aacactcata aacacattac atcagcttga aataaaaata atcacgggca
       61 aggaatatat tcctgcacat caaaacacgc cacttaaagg atgatgccac gaagacacaa
      121 agcattaaac attagcttca gcaaagtagc tacaagaaat gccctcagag atagaatatc
      181 taagaaaaat agtactggca tctaattaca gcagtagagt ttgctgcttt tatctgtaat
      241 tggactgtat agtctttcat tctaatttac tttacatcca aactgtgata atcaagacaa
      301 gcagaacaga atggcttgta actggctata ccaccgacac cagttaatgc ctaattataa
      361 caactaaatt aaagagggga ctgtaaggag gttgagtatc agtttgaaac atttaattct
      421 gtggaaagaa atagagattt taaatcctaa gtatattatg gctcattata ttggtattgc
      481 taaacagatt aatgaaatta agtattttgt tttttaaaga aaagttttat catgatgtaa
      541 agatagcttt taatgaaaga ccacactaga gaaggaaatt cacattccag accaatttat
      601 aaaccaatct aatccagtag gtagaattga ctttcccaag ataagagttg c
//
LOCUS       KCPA01002385             803 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 262340tic ultra-conserved element locus
            uce-3946, sequence.
ACCESSION   KCPA01002385
VERSION     KCPA01002385.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 803)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 803)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..803
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="262340tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>803
                     /note="ultra-conserved element locus uce-3946"
BASE COUNT          236 a          166 c          144 g          257 t
ORIGIN      
        1 tgtacatgga ggagttttca caatgaatag cctaatcagg gtgaagaatc ctcaactgaa
       61 agctcacaaa gaaatccctc tatcttttct ccattttttc aattctactt ttctcgatag
      121 gggtgtctca ccagagaacc tgaagagtga aagatttact gaaatccatc aaacccaggc
      181 ttgtggtcca aacccaagca gctgtcaaac ccagagacag gaatgtatgc tcacttctgc
      241 ctaataaaat ttgaatcaaa cactttgcat ctgattctcc atgtgagctt ttatgcaaac
      301 ttctaaagtg caaggaatcc tggggtggaa gagctattct gagagctttc acatagttca
      361 tgtaattagg gaaaccactt cctttgattg taagtgttca aaacagctga atttcttctt
      421 tcaaaggact ctgtgatttg ggtcatctct tttacttgct cttttatgtt tctcaagatg
      481 agaggtgaga ctgtaaagca tattatttag aaaaaaaaag attccacttt ttgttttagg
      541 gattgaactt cgactattca aacgcttgtc atttggaatt ctttccctcc ctctgtttcc
      601 ttccttttct gataagctct tcctcaagcg aatatagccc aaaacgccaa tttaaaccta
      661 agggaaaact gaaatacggt acataaagga aaagggactc tcattttctt ttgtgcggtc
      721 gtagttgaat atgtaattat aaaggagctc tacctgcagg atctcagtcc ccatgtcaca
      781 tccacttttt caatggttct aaa
//
LOCUS       KCPA01002386             476 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 262449tic ultra-conserved element locus
            uce-4580, sequence.
ACCESSION   KCPA01002386
VERSION     KCPA01002386.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 476)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 476)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="262449tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>476
                     /note="ultra-conserved element locus uce-4580"
BASE COUNT          151 a           81 c          105 g          139 t
ORIGIN      
        1 catcactgac taatgaggac tgacctttgc agcaatatat acagttagtt tattaaagca
       61 gggacagagc aatctctagg cctttggtca atctaggttg cttggggctg aggaatttcc
      121 atttaaaata tctcttcagg tgataaagac tgattcaata gagatcggct aataaagaaa
      181 gtgctggaag ctaccattaa attctagctt ctgtcagctt aacagtgaaa acttttaatg
      241 aggaaaccat taaagttgac ctaatgaatc agaaatgctt ttccttgctg gctaattata
      301 gagtgcctag aatatctttc gacatatgta atttagaaaa tacagatcta ttgaggcccc
      361 ctgctctcaa agaaaacctg ttgcatctca tctgggagga ggcagagttt gacctggatt
      421 cactgagcaa atgaggtcag atgggctgga tgcagaggat atattaaatt agtggt
//
LOCUS       KCPA01002387             726 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 262560tic ultra-conserved element locus
            uce-7283, sequence.
ACCESSION   KCPA01002387
VERSION     KCPA01002387.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 726)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 726)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..726
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="262560tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>726
                     /note="ultra-conserved element locus uce-7283"
BASE COUNT          234 a          151 c          133 g          208 t
ORIGIN      
        1 ttgaaccact aaataccatc agccattaaa attactagtt gccgctgtaa tcttgaaaac
       61 taaaggaaga aattattttg cttaaaatac tggtaaaaaa gctgaaagaa taaaattaag
      121 ttgacctttt gatagatgtc tgtttattga tttaaattca ccattttgtg aacaatgtca
      181 aagaggtctg ttagaataga agcatgtata ataacatgag ctaaacaatt tttatttctt
      241 tgtgtgtcat tacagagaga ttgaagcaag cttcacctaa gtgtagtgat gcaaaaaaaa
      301 taataatacc cagtctggat gtgaaaaaaa aacaagagct tcatattaaa gtgccttcta
      361 ggtagctgac atgacgcatc tagtcagacg taaataatga cagacggaaa ctatcatgag
      421 gtctgtgaag catcaacatg ctgccatcat tttctttcta accttgcttt gctagcagct
      481 ctcagactta caggctgaga gatcatttaa aaagcaaatc ctaatgatgc tgcccactgt
      541 agcaacagcc agtgaggctg gcatcaacct cgctgagttt gggagctcag gctagcagcc
      601 attgctggct cctgatgccc caaaccctcc ccggctcccc gcagcttcat gtgcatctca
      661 ctgaaattga tccacacttc acccacctct tggcaaataa gcccttcagt tattttcttt
      721 attgga
//
LOCUS       KCPA01002388             490 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 262669tic ultra-conserved element locus
            uce-5157, sequence.
ACCESSION   KCPA01002388
VERSION     KCPA01002388.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 490)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 490)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="262669tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>490
                     /note="ultra-conserved element locus uce-5157"
BASE COUNT          152 a           87 c           83 g          168 t
ORIGIN      
        1 tgtgttagct tagctggcta atgaataatt gccacaatta ccaaatcttt gttttcaatt
       61 ttcagtaagc agagctttag aagaacaaac tgctcttgaa agtttttctc cctgaaagaa
      121 ggaaatcctt cctagcaact gcaattatga tactttcatg tcaaatgaat tatattactg
      181 agaataaatc tttctaagat gcacaagagg gttatctggc tccagtcaga cttatgcatt
      241 actggtttta tatgttgtac tctacttgat taatataggt aatcaaatta tactgccttc
      301 cactgtgctc tcaaattcag ggctataatg ttttcaatga caaagttcat agagttgtat
      361 aaaaatgtac ctcatgctgt accagccctt tattgctgta gtaaaacacc attttcaatt
      421 tagtaataag tgatataaaa cagagtgtct tgattggcag ggtcgtattc attatgcagt
      481 gccctacgac
//
LOCUS       KCPA01002389             568 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 262779tic ultra-conserved element locus
            uce-7263, sequence.
ACCESSION   KCPA01002389
VERSION     KCPA01002389.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 568)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 568)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="262779tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>568
                     /note="ultra-conserved element locus uce-7263"
BASE COUNT          151 a          113 c          140 g          164 t
ORIGIN      
        1 tttctcctga cgtgccttcg ttaaccattt gagtgaccct ttagtgacta atttaattac
       61 cccggcccac aaactgacag acagctgtta aaaatggtta ttgcattatt aatacgctcc
      121 agtaatttcc cattaaaact atactgttaa taacccctgt atttcttccc tcttaattag
      181 tctatttaaa actttgaagg aatattctct ttatggtaaa tgggagcgtc gagcaaatta
      241 catttttgat tgaatacttc tgtgataggc cagcaaataa gaccgttgag ttgttaatta
      301 ttgtcagagt ttcacacgat gcctgctaat gaggcagtca atcttctctg ccattcccag
      361 aatattaatg gaagccgttg gtattgattt tgtcaccagg aaaggtagga acttgggggg
      421 ctccagggag ggcaggggga tctgcagtga gaggggacac tgaggggacc agagaggggt
      481 gaggagattg aagctggtgg aaagctcttg gatgtgccag tggcagcggg ggggttggca
      541 cattcccaca gggatccatc ccatccac
//
LOCUS       KCPA01002390             512 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 262885tic ultra-conserved element locus
            uce-1413, sequence.
ACCESSION   KCPA01002390
VERSION     KCPA01002390.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 512)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 512)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="262885tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>512
                     /note="ultra-conserved element locus uce-1413"
BASE COUNT          203 a           82 c           71 g          156 t
ORIGIN      
        1 ttctttttga agtatgttat ctaaattcaa attttaagaa ggtcattaaa aaaatctgcc
       61 tgtgatttta aaggagaaca aagtggtggc aagaaggtat gatgtgcact aagaacaagt
      121 tattcctccc agatatacac atacacagac aaaccctgcc atatcatacc atacaaacaa
      181 ttttaattgt gtagttacag tcaataacca ctcctagtca gaacatttct gcataaagaa
      241 aattgtgata cacttataaa aacagccagc tgtaacaaaa taactggtgt tttcatagca
      301 ataaactcat aaaaaagaaa tacaccttta tacagaaaat ttatacagct gtagctttaa
      361 aattgattgt aaaccaaagg aagacacatt gcaaacatca attattttca cattaattgc
      421 ataagtttct aaggtgatct attagtttta tttacctaag cttatttgca tgatagtaaa
      481 aattgcatac aacaataaga gtgaagctta ta
//
LOCUS       KCPA01002391             582 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 262995tic ultra-conserved element locus
            uce-3244, sequence.
ACCESSION   KCPA01002391
VERSION     KCPA01002391.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 582)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 582)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="262995tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>582
                     /note="ultra-conserved element locus uce-3244"
BASE COUNT          166 a          132 c          111 g          173 t
ORIGIN      
        1 tttgtttcca tcctttctta aagagaactt tggcccagaa gcaaaaatgt agtaaccctt
       61 gtgtaagcat tagtttattg tgtaccaaag aaaattacat ccttgaggtc ttggaaggca
      121 cagttatacc cattttgcat atatattgtg cattacttgg ggagctgggt ggggagaaag
      181 actgtgttgt acatatttgt tctggctatt gtttatgcag gtctgactga atgaaggaac
      241 agtgggtatc atttcaattt ctgatgtcaa catcaaatta cttatttaat ttcatgcctg
      301 gtgaagcatt gtatagctac acgcagaatc atttcacttc atttgttatg ctgtgttttc
      361 ttggcgattg gcttgccttc caactgacag ctttaattac gacatgaatt tgattgcact
      421 gctgaggaat taacataatg caacaaagca tttaagcacc caaccttaga cacacaaaca
      481 cacacgtccc caccctcgca gccacacgca cacacagcca ctgctgctga gcagctcctg
      541 gcacaacaca aacagagctc tgctcatcac tccacacaca gc
//
LOCUS       KCPA01002392            1097 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 263095tic ultra-conserved element locus
            uce-1806, sequence.
ACCESSION   KCPA01002392
VERSION     KCPA01002392.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 1097)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1097)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1097
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="263095tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>1097
                     /note="ultra-conserved element locus uce-1806"
BASE COUNT          384 a          198 c          175 g          340 t
ORIGIN      
        1 ttgtagttag ttcattacac ctcctcggtg gggtattccc caccagcaga atttttcctc
       61 attcttgagt gcactaagag tgcatgactg ttgccattat gtacctagat ggatacaaaa
      121 atccttctta gttctacgtg aaaccagtgg ggttttcaca gcttgtcaga ataaaaaaat
      181 gaaaagacaa cattgtcaat ggacctgaaa aagttgtttc ttcctcaccc tgtataatgt
      241 ctcaagctct tttaacttgt tgctaaatgt ttatctacac atgctgtcag aaataacctt
      301 gttaggaagg tgaagttggt gtctcagcaa atcagaccca tggagtaggc gttgagtggc
      361 ctgtgactcg ctttcctttt ttctctttca gcaccatcaa aaggaaaagt gagaaaaaca
      421 gcacaaacat tagttaaagc ctgaatttaa tcccatgtcc tacaggaata atttcattac
      481 aatgaaagca gacagacagt atctgtattt gtttttaagt agtgataatt tatatccaat
      541 taatatagcc tatagctctc ccaaagatcg taacatttaa tatttaatta aatgattaca
      601 aattacctga tttaccatca ctgaagacag attcttttaa aaatggctac aaatgccttg
      661 ttcacaaaag actttattat ctaatgatgc atactgaaaa catacagaaa tctgcatggt
      721 ccactttaca tgcagcagaa caatcttcac tttacaataa gtaagtgtca actgttttat
      781 gcaagagaca acactttaaa gtcacatttc ttaaagaaaa gcttcattta caaaagaaat
      841 aaaaggtaaa gaagcaatta ccgcttttaa aaagcagctg ctttgttcaa gagtggaagg
      901 tttatgcctg tattgaaaga caacatgatc acaaataatg aaaacaatga acaaatgaaa
      961 cacttttagc ataaagcagt acactttcaa aatgacatac aaatagttaa aaatttcatt
     1021 atgttgtcta tctatccttt agatataagg tctttcgaat gggatcccaa tgtatgtaat
     1081 tactaaatga aaactct
//
LOCUS       KCPA01002393             630 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 263309tic ultra-conserved element locus
            uce-6674, sequence.
ACCESSION   KCPA01002393
VERSION     KCPA01002393.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 630)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 630)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..630
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="263309tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>630
                     /note="ultra-conserved element locus uce-6674"
BASE COUNT          200 a          102 c          122 g          206 t
ORIGIN      
        1 ggaggcagaa ttaggagctg tgcctgagac agtaagtttt caagaagctg attttctgaa
       61 ttccccttac aaatgtttta cagtggaagc aggaaagcgg aaacatgctt catatctgac
      121 taaaaataaa ggtactctta aacttgtaaa aggcaacatt tttatttgaa tgatatgaca
      181 gagctgccac aggagtgtta cctgctataa agaaagctta agaattatta cctttattag
      241 accagtgaca ctgagcttta gccatacatt tctaacttct gtccctctac agagacaatt
      301 ttcttttctt aaataaactg tcatgctagt gttaatatat tgttggctcc ctcatactct
      361 gagaatactg ctgatataaa acatgtatat gttagattgg taatagtatc tttagtgtag
      421 ctgactagaa caaatgtgtt tccctcatgg ctgtgctaat gtgataaagg aaaattggct
      481 gttcatcagc ttttggctgg gtaaagacag tagagatgga accacattct tttttatgca
      541 ttaatactac tgagaacttt tcactagtta tatttcatgt gcaggcatgt tgtgcaaaga
      601 tgttgtaaaa catgagataa tgctacaaat
//
LOCUS       KCPA01002394             473 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 263415tic ultra-conserved element locus
            uce-5356, sequence.
ACCESSION   KCPA01002394
VERSION     KCPA01002394.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 473)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 473)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="263415tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>473
                     /note="ultra-conserved element locus uce-5356"
BASE COUNT          137 a          107 c           78 g          151 t
ORIGIN      
        1 ctgtctttat gcacgtacca cactactggc agattgtttt acagcaagac ctcctggtga
       61 gcccctcctg agcttactca tctgctacca agcatgagac agctgacagg tttttaaatg
      121 atgaactcct atgggtcaca ttacttaatt atacagtaca tccagggata tgcacatggg
      181 tcttttatgg taaatgatat gactgtctta aaaactcatt aatatgtcat taaccaagca
      241 gacatttact aattaaacaa ttagcccctc tcttctattc ctttgttcca ctcagagacg
      301 ctcatttact gtgatcccca ctcagaccca tttaatttat ctaagtatct ataaaatatt
      361 tcctttttgt ctcagtttgg gaaaccaaaa caaagtctag attcccagct ggtgagaatc
      421 agctttatct catggaagtc aaaggagtta tggtgattta ctccacctga gga
//
LOCUS       KCPA01002395             755 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 263528tic ultra-conserved element locus
            uce-6752, sequence.
ACCESSION   KCPA01002395
VERSION     KCPA01002395.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 755)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 755)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..755
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="263528tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>755
                     /note="ultra-conserved element locus uce-6752"
BASE COUNT          198 a          160 c          165 g          232 t
ORIGIN      
        1 tgcccacttt cacacctttt tgaagtgata actatgtgct cattttgctt tcagcgcagt
       61 atcatcacaa caaaggtaga tatttagtag agaacaagga gaaggcacca ttctcagtgt
      121 ctaacaggtc ataccattgg atgccacagt tcgagcctga ttttggaatg ttttggatcg
      181 agttccatat tgccctgaaa aatggctggc ttggggtgat aactcattcc atgcactgct
      241 ctgtgacgga tgaaggctcg cctgggactc cgcaggggga ttcaggccca ggctaagtct
      301 acatcttggg gctcctcctt cagtttttct ccttctttgc caactcgttg atagattctt
      361 ccagtgctgt cattcagtaa tcttctcatc cctgtaattt gttttttaat ttcccggctt
      421 tcatctccta atgaaaacag agccacagtt atcactgtaa attagcaaaa acagtaatgg
      481 gtagcaatta attttagatg ccaataagag ttggagcact aagaaggaat tgagtggtcg
      541 ttgggatgta ccaggctatg ctttcacaca gccatggttg acagctctca tgcctgaaag
      601 acctgctgaa cttggctttc ttgatgctgt ttctttgatg agtaagatgc cagaaggaaa
      661 taatagctac agcagtttca taaactgtcc ttttaagaga ctgatcctat tcaggcattg
      721 acatcagtgg atattttctg agtaaagccc aaagg
//
LOCUS       KCPA01002396             692 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 263635tic ultra-conserved element locus
            uce-4844, sequence.
ACCESSION   KCPA01002396
VERSION     KCPA01002396.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 692)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 692)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="263635tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>692
                     /note="ultra-conserved element locus uce-4844"
BASE COUNT          226 a          107 c          164 g          195 t
ORIGIN      
        1 tttggaagga aaatttaggt cttttaagaa gttgggtatt aaaaaataaa tgaaatggct
       61 ttttaagatc acaggatcag tccaatccat gtaaatttta ttacaagact tgggcagcaa
      121 tttgagtgct gctaaaatat taattggata gaaatgaaag ggttctgcta gctgatagga
      181 tatcataatc atagctgcag tagtcgatgg taaatgatga taaatggcat taggaacctt
      241 ttagcaagct gtaataacta caaggaggga agcagtatgg atttgcatta tatctgatac
      301 cctctagtac caagtggatt gccaatactg cttgtttagc attttctaag ggcaatagga
      361 tattgatttc tgtcttacaa ggaatagctc tattttcacc attgaaaagt attgcaggtt
      421 gttaagaaga aattgacttg aagaggcctg actgctgccc atcatggagc aaataaagca
      481 aaactgccga agcatggtgg agcagtgaga tggggccctc agcaatttgt tgctattaat
      541 ttaccatgct cgacagcaaa tcaatcggca tctacttcat ctgctggaga aaatgctgtc
      601 cagggcagat aaaaggccct ggtggtacag ggaatagact ggattggcca aacggaggct
      661 gcagttaatg tgtaaataag tgaaatcaag gc
//
LOCUS       KCPA01002397             594 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 263745tic ultra-conserved element locus
            uce-2145, sequence.
ACCESSION   KCPA01002397
VERSION     KCPA01002397.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 594)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 594)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="263745tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>594
                     /note="ultra-conserved element locus uce-2145"
BASE COUNT          190 a          113 c          103 g          188 t
ORIGIN      
        1 atgggagttt aacaaacaaa taccagcccc tgctgagcct tttcagtcca gcagcttatg
       61 ggtgattcag ttgcatcaga ggcttttaga ctgatcaatt cttaatcaca aagcacaaaa
      121 attattctca gactcatgtc agtttctttg gacacctttg ttaacaatct gcttcaaata
      181 atttttttaa agaactgcag acactgtttt tattgacttg ccacttgtaa aatgtttata
      241 gcttgttaat ttatatttac ccctttactt ttgcctgcaa atcaacatca cttagcacag
      301 tttggttaca ctttgtccaa aggaaattac agaagcctgc tatggggcta aaatgaagga
      361 aagctgagga aaatcaatac actgatgatt aaacagatcg tagcaaattc acggttgtaa
      421 gctacagcat ggagacatca gtgtgatgcc tatctagcag ttaatgtcct ttcagccagt
      481 tgaagaaaat tttacaataa ggcaaaatgt tacagaaaaa atataagcta ctgcagagca
      541 atttcactcg gtaggaacag tcctgttatc caaattttat tttgctactt gtct
//
LOCUS       KCPA01002398             499 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 263856tic ultra-conserved element locus
            uce-5114, sequence.
ACCESSION   KCPA01002398
VERSION     KCPA01002398.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 499)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 499)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..499
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="263856tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>499
                     /note="ultra-conserved element locus uce-5114"
BASE COUNT          163 a          100 c           89 g          147 t
ORIGIN      
        1 agcctgattg tcaaaaaagc gcacacagaa agagtcaact agctacaagg aacgaagtga
       61 tcttttccca ttataatcag gacacagagc ctgtgatatc tctgagagct caatctaaat
      121 aaggccccat cctctcgtct atttcacatt atgaataaaa acatgaaatt agttttatgt
      181 cagaagaaca acccttaaga cacttgtaac ttataattat aatttctaag ctgtttggct
      241 tgtcagtatc aaggaattca cagcccaaga cttccaggac tttataggct gagacatgct
      301 gtactagcta ctgaaaatta actatgaatc tctcatctgc atcctgattt attaactaca
      361 gtgagaaaca gaaagtttct gtatgtgcat agcttgctag agtggaagcc actggctgtg
      421 ttctgctcct gttcaataaa ctactagcaa cgggtaaatg tagggtttct tcctgcaaaa
      481 gttttcttgt aaataaaca
//
LOCUS       KCPA01002399             689 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 263969tic ultra-conserved element locus
            uce-1148, sequence.
ACCESSION   KCPA01002399
VERSION     KCPA01002399.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 689)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 689)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..689
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="263969tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>689
                     /note="ultra-conserved element locus uce-1148"
BASE COUNT          250 a          137 c          115 g          187 t
ORIGIN      
        1 taacagtttc acggtatgga tgaatggtgt tacagcactt aagattacac atgcacaaac
       61 atgatggaaa ttagtattac tgtagatatc aaaagcaaac agacctaatt aaagaaataa
      121 ctgcaacaaa accagatgta acccaaaaca aaaaaggaca gctccaaatc taatgaatcc
      181 tttgaatatt aattacagaa ttcctaacaa tacactggga aagctctctt ggagaattca
      241 gtttactgtt taacagtttc tgactaattt tattaacctg tacatctgag aggatcaacc
      301 ccctctgggt ttaattagaa gaaaattcaa tttaaatcta aatgtcaaca gtggttacta
      361 attatggcag ggccctggac gagacatcca gtctgtaatc aggcggttct ctgctaacaa
      421 ttaacagttt ctttctgagt tatgagtgca ttaggatttt cttttttcta aataaatatg
      481 attcagcatg gggcacgact aatattaaca gcacctactg ctacgtgcag acatgcagaa
      541 gaggttgcca aattaaatta cagagatttc tcaaacatat agctgaataa taagcagcta
      601 caaaactagg tcagggtcgc aagcagtcaa ccacagcccc tccccccaac atgcaaaata
      661 aatataccca ctatctctga atagaaatc
//
LOCUS       KCPA01002400             432 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 264071tic ultra-conserved element locus
            uce-4141, sequence.
ACCESSION   KCPA01002400
VERSION     KCPA01002400.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 432)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 432)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="264071tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>432
                     /note="ultra-conserved element locus uce-4141"
BASE COUNT          161 a           82 c           59 g          130 t
ORIGIN      
        1 tcaaaacatg ataattcctg acagctgctg cttgagcaca agttaaattg aacagtttat
       61 ctcagcataa agatgttata aggttttatg tttaatttaa aaaaattaac ataaaaccca
      121 gagaaagcag agttaggcaa tctttcacaa acatgacata ctacaatcac tgtataagct
      181 ggattagtac ttattaccat gctactagag aattaagctg tttttagacc accaaagagc
      241 tttaaattgc aacttttgtc tctgtaagag aaacctatat ttaaaacgtc tgctaaattc
      301 aaattaacag ctacatcatt aacttaccat ctcacaaaac tattatggtg tccttagcga
      361 gacctatcaa cactgcagca tttaatatat acagtgctct ccaataaata cagtgagtga
      421 atcctcacta aa
//
LOCUS       KCPA01002401             632 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 264177tic ultra-conserved element locus
            uce-6587, sequence.
ACCESSION   KCPA01002401
VERSION     KCPA01002401.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 632)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 632)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..632
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="264177tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>632
                     /note="ultra-conserved element locus uce-6587"
BASE COUNT          193 a          111 c          129 g          199 t
ORIGIN      
        1 gaagggtggt tattccagaa ggcttgagga gggaattccc aacattagtg aaatattgcc
       61 agcagtaaga ggtgtgaaat ggcaatggga tcttttcctg catcagccat tttcatacca
      121 agattttata tcaggtggtt aaaaaaatgt gttagcacat caactcttct gaaaagacta
      181 atttattatc atgtcattat tagcacaatc acagaaaggg tcactggtct ttcctttaat
      241 ttctgtcaca ggctgcaggc cgcattatgc tgaatcaagg atatgggaag ataattaaca
      301 cagcatctat ggcaagttta ataggtgagt gatgagagct aacagttgtg cttcagaatc
      361 catattttaa ttactaccga tgctatttga atcaattaaa cctgtattgg gaaggagtaa
      421 atcactgaca tttcatatta gaggaaatgt actacaaaat ttttattgat atcatttttc
      481 aacatttatc tgtcctccat gttttagagc acttattact ttttatagaa aaggtggagt
      541 caccttctct gactctggtg catgaatacc acaggagatc cctccctgct gttccaggca
      601 aacatgtggg aagctgaggt gccaatattt gc
//
LOCUS       KCPA01002402             756 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 264285tic ultra-conserved element locus
            uce-1291, sequence.
ACCESSION   KCPA01002402
VERSION     KCPA01002402.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 756)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 756)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..756
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="264285tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>756
                     /note="ultra-conserved element locus uce-1291"
BASE COUNT          206 a          145 c          153 g          252 t
ORIGIN      
        1 atttgcatat tcagagtctg ccttgggttt tcttgttttt attctaattc ttttaaaagt
       61 acatttacct ggagaagggc ttagttctat tttctctgca gttgacttta atcctaccga
      121 aagaattaac actcagaaaa ccttctttgg gtcctacagg gcattagaac atctcaggta
      181 gtggctgctg gtttaataaa aggataggat ttccatttac ttcaggcagg cttaatgtat
      241 tgttcttgta gtgagacagt cagaatgagt caggagccaa agaatacact ttatagacac
      301 aaataatcgt aaattcagaa tgtcaccttt aggcagaggc atttttatta ttgttagtgg
      361 agctgctgag taggtttgat gttttattct cttgagtact aaatgttcca gagtaccaca
      421 gccctatctt tatcaggctc acaaggaggg agcacagcca aacttgcttc ctatacttct
      481 ctatgattga tagcagatgg catgctttaa aataaaccta tccattagca gtcctcagtg
      541 tttttactca aggcatttac aactgtctca accagaaaac acattctctc cacaagctcg
      601 tttcagtctg caacagctgt acaggtgcaa atctttcatt aactcttaaa ccgtggtgaa
      661 ataaacgctg cactgtattt tatttttagt ggaggaggtt gttcttcaga ggcagagtgg
      721 attctgttct cgctttgcac gtggcagagg ttcgtg
//
LOCUS       KCPA01002403             649 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 264396tic ultra-conserved element locus
            uce-4588, sequence.
ACCESSION   KCPA01002403
VERSION     KCPA01002403.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 649)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 649)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..649
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="264396tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>649
                     /note="ultra-conserved element locus uce-4588"
BASE COUNT          212 a          125 c          118 g          194 t
ORIGIN      
        1 aaacaaattt gtatttcctt cagcacaaac atattttaca ccaatattta tagattgcac
       61 cactgtgatt cattaacaaa taaagcccat tttctgtcac aaatgactta aagaacacca
      121 aaataaattc tacgttcctt gtaagggcat attcttattg atatctttat gctacgagag
      181 attatttggc aaataatatt gctcttgcag atctcacttc tctgaggaaa cactagatcg
      241 tgtaacagaa atatctttaa atcttttaga tagccagtcc acagggaaag gtttaagaaa
      301 ggatcaaagc ttgtcctttc agcttgaatt attccattac agctgaatgt gacataatta
      361 caaaagatgt tggatgtgga atctcatcag gattatctga cactcatctt tgttgaaaaa
      421 gtctccccag ctgttgctct gatagcacaa atgtgacagg agcacagaac acaaaagtag
      481 ttgcaagtga ctgctgcttt ggggctggtt taggctccat gcagcacgct gtgacttctc
      541 agccacctca aatattaagg cggactgcct tgcaggtgag agggaatacc aagtatgcta
      601 ttgaatttct aaataagaaa atttgtttga agcagcccat agaccaata
//
LOCUS       KCPA01002404             620 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 264506tic ultra-conserved element locus
            uce-1550, sequence.
ACCESSION   KCPA01002404
VERSION     KCPA01002404.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 620)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 620)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..620
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="264506tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>620
                     /note="ultra-conserved element locus uce-1550"
BASE COUNT          219 a          112 c           99 g          190 t
ORIGIN      
        1 catttaaaat ccaagtttcc cctctttcat tatcctgggg tgccctaagt accaattaaa
       61 tttctttcaa tgacatgagc taccaatcag aatcactata tatctataga aattgaaatt
      121 gtaatgagtc ttaccagtgt attgctaaca ctttggttca tttgatatga actttgtttt
      181 tttaaagtac cacatggtaa ggctttgaaa cttcagtttg taaaaaaaac tgtaacagcc
      241 ttacagcctt tgaagtcact actgatataa ctctgaacag atccattcaa gttcaactaa
      301 catcagacaa atgtttagtg tatcagagga agccacaaaa gcaaggattt catcaatatt
      361 tcacaacagc ctcagggaaa ctgtagattg caatgctgta gggcagctaa tggaattaca
      421 cacaagggtt ttgtacattt aaaataagca gctactaaaa aaattaccct tcagtttgat
      481 agaaactgta taaaactgca gatgggaaac aattaaatag ctaccaacat ttatccatgt
      541 cagcctgata ggtcatttaa taacaggtat ttctttcccc tggtagggca ataataaaga
      601 ttaacattta tgaaaagtag
//
LOCUS       KCPA01002405             493 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 264612tic ultra-conserved element locus
            uce-1350, sequence.
ACCESSION   KCPA01002405
VERSION     KCPA01002405.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 493)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 493)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="264612tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>493
                     /note="ultra-conserved element locus uce-1350"
BASE COUNT          181 a           80 c           65 g          167 t
ORIGIN      
        1 aaaagcaagt tctaatgctg aagaacaaca tggcataatg ttgtttttca aaacaccccc
       61 agatttgtct ttctttttaa tgttcttcac tttgcttctt agaaaagggg ttaaaattag
      121 taggcacatt tcatattagc gtatttcatg caataaagca taaattattt aaaataacac
      181 gaccttttat cttgcacctt ttgaaggaag caaattaaaa atgtaaattg ggagctaatt
      241 aatatgcaaa tgtattcatt cgcagttaac aattagcaat taaacctgca gtgtctacaa
      301 agagcacgga caaaattagt aacttaattt atcattaaaa aatgaaaacg tacacaaaat
      361 tttaattgac tttcaaaata tttcccctgc tttttccctt tatttttaat acaaaaaatc
      421 atattgagcc ttagatatat agatgaaact tgctacctac agctttctgt tgaagttcat
      481 tacaaaagac tga
//
LOCUS       KCPA01002406             736 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 264723tic ultra-conserved element locus
            uce-6580, sequence.
ACCESSION   KCPA01002406
VERSION     KCPA01002406.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 736)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 736)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..736
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="264723tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>736
                     /note="ultra-conserved element locus uce-6580"
BASE COUNT          199 a          169 c          141 g          227 t
ORIGIN      
        1 acatagacac acgcactgcc ttgtttctgc cagtagccag tttagtgaga atccactgca
       61 gttctgttta caacagccat ggagagaaat ctgcacttat ttaccactat cctctgcttt
      121 aaaatgcaga agtcccgggt tgtgttgtgc cgctctcatc ttatataatg acattaagca
      181 gcagcctgca gagaaaacca gactcactta aaaatgtaat agcattgttt tttgttcgta
      241 atacttatgc tattaattaa atactgactg ctttgtgcca attgacatca tcttctgcat
      301 ctactgcaca tgaaaactgc gtctcctaac ttgtcttctc tttttttttc cactttctag
      361 taacggcaca gctaacaaga tgaatggagc tttggatcat tcagaccaac cagacccaga
      421 tgccattaag atgtttgttg gacagattcc ccgttcgtgg tcagaaaaag aattaaaaga
      481 actttttgag ccttatggag ctgtctacca gattaatgtt ctccgagaca gaagtcagaa
      541 ccctccccaa agtaaaggta cagtttgctt tcagcccgat gatcctgctt gccctcagca
      601 ttcccaaaga gggcatctct gttttgtagt atgctgtgtt gagctatgga gcagtcctaa
      661 gaggagaggc ctatcagata ttgccttcct ccccttctta aactgaagtt taattgtctg
      721 ttatctggaa gcatgc
//
LOCUS       KCPA01002407             332 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 264823tic ultra-conserved element locus
            uce-66, sequence.
ACCESSION   KCPA01002407
VERSION     KCPA01002407.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 332)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 332)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="264823tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>332
                     /note="ultra-conserved element locus uce-66"
BASE COUNT          105 a           62 c           47 g          118 t
ORIGIN      
        1 ttaacccgtg cctgtgccta ggtatcttca tccgtgtcaa acaaatttgt aggactcgtg
       61 attagttgcc caaagagcat aatatatgca ttattaatta tagaaggtaa gtttggctaa
      121 ttgtcatttc tatacagtag cactgcacga cgatacattt taacaatcta taaataattg
      181 ataatttttt ttctttcatc ttcctcccta gtttgcataa aactaatgac ttggtaaatg
      241 ttactcactt caaaatattc cactgctcct atgaaaatta aaccaacact gtaaccttag
      301 caaataagga gatttttcat cttattgtag gt
//
LOCUS       KCPA01002408             428 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 264930tic ultra-conserved element locus
            uce-3422, sequence.
ACCESSION   KCPA01002408
VERSION     KCPA01002408.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 428)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 428)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="264930tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>428
                     /note="ultra-conserved element locus uce-3422"
BASE COUNT          125 a          104 c           59 g          140 t
ORIGIN      
        1 aatctgtcct tttagctaat aacatcaaaa tgagaccttt tcttcacttt gcctggacct
       61 ctaaccttta aaggtgagtt agacagctgc acaaaacctg atctcatttt ctgcccctgg
      121 caagattttt tcaagttcat cttctttttt tcccccttct ctcaaaatct gatgaaaaat
      181 gaaatgtcat gaaaacaggc tctgaggcta aaaaccctct gtctgtctct gtgacagatg
      241 tcagtttgaa aggtttcagg tcacctgtca gaactatgtc agtatgatcc atacaaacat
      301 ctactcaacc tctaacacta acattgagtt ctgcttttta aaatacccct tgaaaaagaa
      361 tcaaatttca agtcactgcc ttttcccctt tcttttaact ctgattaatg agccaaactc
      421 tcaggcaa
//
LOCUS       KCPA01002409             699 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 265040tic ultra-conserved element locus
            uce-5609, sequence.
ACCESSION   KCPA01002409
VERSION     KCPA01002409.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 699)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 699)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..699
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="265040tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>699
                     /note="ultra-conserved element locus uce-5609"
BASE COUNT          226 a          110 c          113 g          250 t
ORIGIN      
        1 actttatctt atagcaaatg aatatttgtg gagacaaagt atttgatctg ataacttcac
       61 ttgaaagaat caaggttatt ttatgtcaat tttctctttg ccctatgtaa gatgcattta
      121 attatttcat gctatctcct tctattcaaa ttaatctgcc ttatatatat tgttgctcaa
      181 attagaataa ttctttaatc agctgtgtta tgcatgccat agtaggccag aatgggaaag
      241 ctactcctag catactgaca atgcatgttt gtaatttaaa agtaaaatca gaaatattga
      301 tttctacttg actggagaga tgatttagtt tgaatatcag actgatccta atcaggtgag
      361 aattaattga gttggaggta ttagatattc agtgatgtta actgaaccat gagcaatcta
      421 cagagaagct ttcttttata ctgtgttgga aatatcaaat agctcatact ctacaatata
      481 aaacaatctc ttcatgttca tgctactact tcctctggct cattaaatgc accagtaatc
      541 tgttctgtgc atactgagta atcttcaaag taacaagcta atgaatcata atttaataca
      601 aaaaagggca caataactac tgttgctggt aatgttttgg atcaaaacgt aggttttgaa
      661 attttgcccg tttatatttt aaagggaact gtttcctcc
//
LOCUS       KCPA01002410             457 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 265145tic ultra-conserved element locus
            uce-1694, sequence.
ACCESSION   KCPA01002410
VERSION     KCPA01002410.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 457)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 457)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..457
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="265145tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>457
                     /note="ultra-conserved element locus uce-1694"
BASE COUNT          145 a           89 c           74 g          149 t
ORIGIN      
        1 ttacaaatct tatatggcta acacatctta attcatgaga tcctggtgtg tataattgga
       61 tagaagtatg aacttgatta cactagtgaa cttgctttct acagggggac aggcttcatt
      121 gtcatcaaag ggtaaagaaa tgtgacaatc tgggaaccag ttttaggacc ccatctgcta
      181 aaccagagag aaatcaagat tttacagttc tataaatatt ttagtgtatg ccatcattta
      241 tgaactctgg cagctatcat aaaatctctc tgacttttgt tacaactgca tataaggcca
      301 gaaaattgca tctcatggta aaccataaaa acctaagtaa aagcaccatt cctttcagta
      361 tattctaaaa atatacaacc tccctgtcag tacatggcag ggttgttacc atcccaagat
      421 gcctgtttct ttctcatttt tttttatctg atcttac
//
LOCUS       KCPA01002411             646 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 265255tic ultra-conserved element locus
            uce-646, sequence.
ACCESSION   KCPA01002411
VERSION     KCPA01002411.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 646)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 646)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..646
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="265255tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>646
                     /note="ultra-conserved element locus uce-646"
BASE COUNT          229 a           97 c          126 g          194 t
ORIGIN      
        1 aatcctgtca gtgatttctc agatgaggga tactcttcag aggctgatac gaagcctgta
       61 tctttgcttt aaaaattcac cttttgagag agtgagcaga gactgcattt taagaaaacc
      121 tgacgaggaa aaaaattgtt tcacttaatc tgaattataa ttgatatttc agactacatg
      181 tgctcgttac taagcataat aaaatttggc attttctatt gtcagaggat ttataaaggc
      241 taaatttctt gatttattta aatagacaga taggaaagag caaactacaa aaacaagtgc
      301 tatatactga aggcatgtga attacctcct tcccaaggat aatgcaaatt agaagtatgt
      361 aaagctttgt ctgcacctgg gatctttaat gaggataaag aaaaatcaga cggagattct
      421 cctgggaaaa gagaggatcg ttatttgaat aacctgcagt gaattctaat caatgcaacg
      481 tgactttgaa aatgaatatg gtttttcaac ccgctgtaca tgagccataa tattaatcat
      541 aacttcatgg tacagtaaag cccatgacaa atggttattc agtggactaa caaaaagacc
      601 attcatagtg ggtggaaggt aagggataca tagaataatt tatttt
//
LOCUS       KCPA01002412             644 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 265359tic ultra-conserved element locus
            uce-5319, sequence.
ACCESSION   KCPA01002412
VERSION     KCPA01002412.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 644)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 644)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..644
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="265359tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>644
                     /note="ultra-conserved element locus uce-5319"
BASE COUNT          166 a          133 c          147 g          198 t
ORIGIN      
        1 ttatttttct aactttgaaa ctgaaatctg ttcttctact gggggtcatt catgacagag
       61 tcctgatgct tagctgcttg ttctttcatt caatacttct atcagtcttc ctgtgcacaa
      121 aattggttcc tgtatttgca cttgattcct gcaggggtgg ttggagtagt tgtctccctc
      181 tttctctagt tcagttccct ccttcctctc cagacaaata aatgccttga gggaagcaga
      241 cgtcactggt gtagtcttgt ttgcatgggg agttgtcagg cctgatctga cctgcctttc
      301 catcaggatt ataaaggtga cggatagtca atttcaggga ttcatgatcc attttagcac
      361 agcgcttcac cttgcagcta agtaatacgg ctgtgataaa atcagccata atcactgcat
      421 cttactcagc actgctttgg ctgtaaatat tgccttcata tattaaaaga aagaaggaaa
      481 gaagagatct aaagagaaaa ggtctgtcga ccatgactga ccagagtggt atttctttat
      541 ataacatagc ggggaacagg acttgcagct ggtgggttct aaggagacaa tgtggcatgc
      601 acaaacctga agcattgggc ttcactagca aagctgggca tggg
//
LOCUS       KCPA01002413             685 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 265468tic ultra-conserved element locus
            uce-5806, sequence.
ACCESSION   KCPA01002413
VERSION     KCPA01002413.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 685)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 685)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="265468tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>685
                     /note="ultra-conserved element locus uce-5806"
BASE COUNT          198 a          149 c          139 g          199 t
ORIGIN      
        1 cctgccttac accccttgcc atgagaagac cttgtcctca ttcttacaag caagtaccag
       61 acctgacctg ttagtccact tatgtaaata ataagtccta ttccctttgc aagctcctgc
      121 taaagctgtg ccattagagc catcgtgtca tttaggcagt cagtggagaa tcaaagactg
      181 cctgtgctgc agcagcccag tgctacgttt ctaagaaaat gggctcttag aaaggaaatg
      241 tcacaccgca gtgtgagaga taaacagagg tatatcttta gagcagcagg cagggactgt
      301 agaaacactc tctgtaaatg actttgatcc cctagtgtga tgaatcatgg agtcgcaaat
      361 cctttttagc taattgctat cagcttgtga gatttttcct tccatgttca atatcaattt
      421 tcagggccat aggagatagc acttgtcccc cgagtctgct ggcgacttac cgctaaaact
      481 gaactagcac cacttaacag tttaaagggg gaagtcattt aatatgacac tgctgctagt
      541 aactaaaagg gggggcaaat aaagggaaca gtaaattttt tttactgtca atgacttgcc
      601 tttgaaaatg tcctttccat atccacatac tatcagtcca tcttttaatt attttaagca
      661 aagacttgga gagtgacatt tagtt
//
LOCUS       KCPA01002414             468 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 265578tic ultra-conserved element locus
            uce-3247, sequence.
ACCESSION   KCPA01002414
VERSION     KCPA01002414.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 468)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 468)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="265578tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>468
                     /note="ultra-conserved element locus uce-3247"
BASE COUNT          140 a           72 c          110 g          146 t
ORIGIN      
        1 cattcacaca tatctgcaag cagaaaagat gtgatacgtc agagaagctc tcgctgtttg
       61 ccagaggtct taagaggatc ttctatttca ttcggtagta atgccctttt tgttgacaaa
      121 agtaaattga tgacaggcaa gagggaagca tttggtggaa aaattctgtt gacccttctc
      181 agattgaatt tgaccacaga acaggatacc agcagttgca gaaatgatag atttttgtaa
      241 tgaccagcag aatggccttt tggcatgttt aaatggcaat aaatttcact gggaagaggg
      301 caatttaact actttagggc agtgaggata ctctttgttt gaggtgtaaa taaattgcgg
      361 ttcattaaca gtgcacatat tacgttcacg gtgtaactct aaagcagggg atgttaatat
      421 ttaatttaat ttaagcaggt atactttgct gtttgaggct tgggcttg
//
LOCUS       KCPA01002415             497 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 265684tic ultra-conserved element locus
            uce-3625, sequence.
ACCESSION   KCPA01002415
VERSION     KCPA01002415.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 497)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 497)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="265684tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>497
                     /note="ultra-conserved element locus uce-3625"
BASE COUNT          134 a          114 c          112 g          137 t
ORIGIN      
        1 gtagctgtac agattgtaaa gaacacaaag gaggttttgt gtgtgcatgt gagtgaatga
       61 gtccccatct ctcccttttg ttttagcttc cttgcatcgg attttatccc atattccact
      121 gcagctcaca attagcagcc aggcctctgg gacctaatta accaattcaa ttaacaaaaa
      181 aagcatacaa gtcaccctga catttgtcag ccattaggag ggatgtcagg ctggtaggtt
      241 ctaccgacac attaatgatg attagctcat ttgcagctca cttttacccc aggtgtccac
      301 ctggagagac tggcacaaaa cactgcagac agggagagga gctggggctg gtaagagctt
      361 tactgaaact gtggtgaccc tcaaagggag ttttgacctt tcattgaacg tataatcaat
      421 aagatttttg cctcagtaaa gagaagctgc tgtcccctca tctggctcct gtgcttgcta
      481 accttcagag gagcact
//
LOCUS       KCPA01002416             770 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 265797tic ultra-conserved element locus
            uce-5053, sequence.
ACCESSION   KCPA01002416
VERSION     KCPA01002416.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 770)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 770)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..770
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="265797tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>770
                     /note="ultra-conserved element locus uce-5053"
BASE COUNT          231 a          153 c          139 g          247 t
ORIGIN      
        1 gagaaattag agcttttcca gtctagagag tttcacttta cagaagtact tcacaaaaac
       61 tcctttgtaa ccacgatgga aaaacctaat tttcaatcac atcacagctc actgactgta
      121 aaagtttttg ttttggtttc atattttctt agagtctttc tagcattggc tattaaggag
      181 ttctcacttt ttgtcgcttt ataaggcagc tcagtttatc ttttgcctat tttctggagc
      241 ctgcaggaag cctctgccat cctaaagaaa gtcacacata atagagcagc tttagcccag
      301 taagccagtc gttcccaatt catcagtcaa agtgttatgc aagtggcccc ctaaattgat
      361 aaattcccac agtgcctgtt gacccagctg ccaagtgctc atgcagcagg tgttgttttc
      421 atgaccaccc tgacagtaat acaaactgtt tagcagttgc attgacctct tagctattaa
      481 cattgataca ggcttcgcta gggactagtt ttcaaacatg acagaatttc ttaagactag
      541 aggtcatgaa caagtatacc atataagaat aaatttgata tgctgctgag tttaaatctt
      601 aaaagccatg agttttttcc acattattcc catgtagtaa atctggagac aagtaacgag
      661 cttttggcat ctctcccagg tttttaattt tagaagctgt acctgaagag atgctatatt
      721 tattctgtga caagtagtaa atttaggtta tgacaagaag tgaaacaaaa
//
LOCUS       KCPA01002417             672 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 265905tic ultra-conserved element locus
            uce-6288, sequence.
ACCESSION   KCPA01002417
VERSION     KCPA01002417.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 672)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 672)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="265905tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>672
                     /note="ultra-conserved element locus uce-6288"
BASE COUNT          226 a          123 c          134 g          189 t
ORIGIN      
        1 atgagaattt gaatctactt ccagagacgt ggcctgaatt aaaatctgat gttgatgaag
       61 agaatatgat tccagtgtgt aaaagccaca ggtgactgtt aataagcagt aaattagcag
      121 aaggaatagc aatgctttca gtttttaact tcaatgcaaa gaataggaag ataattgtga
      181 attaggagcc aaattatgcc aggcacaatt gaataagttc tgacttttct tactgacaga
      241 catgtatatt aatagttggc acttattgaa ccaaatatga atattcatct tcatttatat
      301 ttcaaggcct ttcattcctc aaggaccaca gtgcttttga ccaattttca tccacattac
      361 taaaatgaca gctttcactc ctgggccctg acagaggtct gcagaattca ttggaggtcc
      421 tgggaggagg gaaccagctc ccgctcccag ctgtccacaa acactcatta agagaggcaa
      481 atatccagca gaatctctgt gagaattttt aatcacgcaa aggctctgct aattaggtag
      541 ctgatggggc atagagagca caaggacgaa ttctttaaac aaaggactag aaactttaag
      601 agctttaatt acttgggcac agagttcatt tcagaacttg ggagcaaatt attttaataa
      661 caataagacc aa
//
LOCUS       KCPA01002418             825 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 266013tic ultra-conserved element locus
            uce-1362, sequence.
ACCESSION   KCPA01002418
VERSION     KCPA01002418.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 825)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 825)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..825
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="266013tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>825
                     /note="ultra-conserved element locus uce-1362"
BASE COUNT          236 a          156 c          186 g          247 t
ORIGIN      
        1 cccagactga agcatttgac aggagatgac atgcagtatt ttgtgtacac agcccagcaa
       61 aacactgctg ggaatgagat ataatacatg gagaaatgca ctccaaggga ctaccaagct
      121 acctttagta ccgcctcact catggtggaa atcaaacccc tgccaactgg gggaggcttt
      181 ctttgatgct gttctgccct gcactaatta taagagtaca gacacagccc caagtgtgtg
      241 gaggtggggg tgggggagaa gcgtgtgtct atgtgaagag cacaactatt ttttatgctt
      301 tcaaattctt aatcctgttt ggagctgtca gtgggggtta atggaagcct tggataggag
      361 aattccaatc tggttggcag atggataggt tggttatagc tgcataacta tgtcttgcct
      421 gcaggcacaa ttcagaacac tgttaaagca atataaagtc tctgtcaagc tgaaccattt
      481 ggatcagtag caaggagaaa taataataaa aaaggagttc atttctgggc cttgcgtgtt
      541 tatgctagta tgcagaaact gattaattgt catcgtgtgc tggtctgcta tacctcggat
      601 ttctacttct ggagtagatt ttgcatgcta atataatcat tctccctctt gagacattag
      661 caaataatca aatgaaaaac aggatcataa tttactgaga ttcgggcaat tctctatgca
      721 aatttgactt gttattgctg ctgcctcgtt aatctgaatg cctttgacaa actcctttga
      781 tttatgaact catgacaact ccaatgtgta tatattttgc tagat
//
LOCUS       KCPA01002419             686 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 266124tic ultra-conserved element locus
            uce-2468, sequence.
ACCESSION   KCPA01002419
VERSION     KCPA01002419.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 686)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 686)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..686
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="266124tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>686
                     /note="ultra-conserved element locus uce-2468"
BASE COUNT          185 a          122 c          130 g          249 t
ORIGIN      
        1 tttaacatga gtgaaaggca ttgtttcagc tgctacactt gaaagaaaga caggagcata
       61 tatttttgca ccttgtcatt taagggtggg ataataatat cctattggaa tgtacactcc
      121 agcttcataa gaactgcatc actttcatta tgatcatcct catttcagca gcacttgtgc
      181 attcaacaca tgtggttatg atgttataag ggtggaatga ttgcatctat tcacctttca
      241 tttgtgtgtt gatgtggcat ttatattaag taggagtaat ttttttttct gatttttttt
      301 tcttgtgtca ccagtgcacc tattccattc ttccatcgct gtgctcctgt gaacatttcc
      361 tgctatgcca agtttgcaga ggccctgatc acctttgtca gtgacagtag tgtcttacac
      421 aggctgatta gtggagttat gaccagcaaa gagattataa tgggactttg cttgttatca
      481 ctaggtaatt gtttttctca ttactagcta ttaggagatt gttaacacac tctaaccgca
      541 atatgggcaa aaaacatgta gcaacaatcc cttaaaagta ttcaaatttt atttgagagc
      601 tgggtattca taagtaatat tcatatgtgg ttttgttctc ttacactgat tacaacattg
      661 catggctgtt agccagcatt agtttt
//
LOCUS       KCPA01002420             690 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 266232tic ultra-conserved element locus
            uce-641, sequence.
ACCESSION   KCPA01002420
VERSION     KCPA01002420.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 690)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 690)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..690
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="266232tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>690
                     /note="ultra-conserved element locus uce-641"
BASE COUNT          205 a          155 c          164 g          166 t
ORIGIN      
        1 atgaaacaaa gcaaagagaa acgcagctcc attaaaaagc tgcagaggct taattagtat
       61 attgggtcat tatgacaccc agctcgtttc attaccctcc taatgcatga tgagctggca
      121 gttaaatact gcccagcgag ttccgccttg tctgggcggc cgcggctccg gctccggccg
      181 acagcttacc tggagtaaga agaaatggag ccccaattag aaagctttca gcccagcacc
      241 catggaaaag ccaaaagctg ataaaggtca gcgtgaaatt tgaatgacag ggctaaagtc
      301 ttttactcat aattttgtgt ttgcaataga attcagagca attcacagcc ttaaaggcct
      361 taagtgagaa cagcaattaa ttgtaatgaa taatctgaca aatctggttg acatatggct
      421 gctaatgccc tcctttctag tgggagcagt ggagggatta gattaactca aatgaaatct
      481 gggaccgcca tgccatctgc atgttcagcg aagagcagta cacgttaaat ggtgagtggg
      541 tagatctgtc ttgttccttt ccctccctga gccctcggca gggatgggaa tagcgggttt
      601 attattgcgc cagctgcctg tcagcccaat aatgccgggg agtcacacag tacaacctcg
      661 aaagctaaca cagcaaaaag ctgttaaaaa
//
LOCUS       KCPA01002421             368 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 266334tic ultra-conserved element locus
            uce-2910, sequence.
ACCESSION   KCPA01002421
VERSION     KCPA01002421.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 368)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 368)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="266334tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>368
                     /note="ultra-conserved element locus uce-2910"
BASE COUNT          101 a           76 c           53 g          138 t
ORIGIN      
        1 gatattgact ttcttctctc ctcaatcctt ctctcaggtt tccttttttt actctcctat
       61 catctgcaaa ttgcatcatt tttatctttt gctatgctgg aaatcttatc atgaaagaga
      121 gacttttctt ttttcttttt ttaattagta cttggtaata ttaccaagct gtgagtttat
      181 gactttgtag atcttatatt tttgacacta attactcaca aaggctttta aaccagcatt
      241 tcaacatagc aattggcatg actgtaatta agtaagaagc agcacatttc agagaaagtc
      301 acattcctgc cctgtaccac agctcagccc ctggtattgc tccaatgaat gagaccagat
      361 gttgaaaa
//
LOCUS       KCPA01002422             444 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 266440tic ultra-conserved element locus
            uce-7930, sequence.
ACCESSION   KCPA01002422
VERSION     KCPA01002422.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 444)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 444)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="266440tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>444
                     /note="ultra-conserved element locus uce-7930"
BASE COUNT          142 a           66 c          105 g          131 t
ORIGIN      
        1 catcaatcac aacaatgggt tttaagtgtt tgctggatga gaggagagtc ccataagcag
       61 tctttgaagt gtcttttgct gaaggtaaac atctgaagaa cataaatagc tgctcttctt
      121 tccaatgagt gaccttgtca aagtgggtag aatggagaga tgggggaggg gtgctatcat
      181 gaaaaggaaa agcaataaag gattccttat gacagcaatt tgcacattta ctgctctttg
      241 atatgttaac tagattttgc aaaatggaat gctttgtctt ttggaggtcc ttgggcagtg
      301 atagctcaca gtcagaacaa tgttttgcaa taggcctaat gcatcttcta attaataagg
      361 taacttgggc aacctctgta aatcagtaac attatcatta taacaggaca caagtgaata
      421 gtggtttata aggaaggaaa gatg
//
LOCUS       KCPA01002423             712 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 266550tic ultra-conserved element locus
            uce-2138, sequence.
ACCESSION   KCPA01002423
VERSION     KCPA01002423.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 712)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 712)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..712
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="266550tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>712
                     /note="ultra-conserved element locus uce-2138"
BASE COUNT          215 a          106 c          136 g          255 t
ORIGIN      
        1 ttgcaagaat tatctgttct gcatccacct ggagctttta ttttactaca ctttgtgatc
       61 taaaattttg ctaaaagaaa aaccctcaag gttgacaagg actaggattg acagaactgt
      121 gggtctttga aatccctgtt gtccatttaa attttaatgt ttctatcatt tgttcctcag
      181 tgtaaattaa cagccatggc agtgtgttgg gtttcttttc tgaagtcaag actttaaatt
      241 taattcaata gcctagattt acagctattc tatatttcac aaggcagaat caataatgtg
      301 actgaagtga agaagataaa aatttatggt atcttgcaat ttaatggttg aaaagatgca
      361 attggagaga tcataaattg tgaaggagtt tatgcttcat tgctcctgat tcagtgcttg
      421 ctgttagaac ttgatttgtg actattcaca aggtgtgatt aatggtgtga tcgatgcttg
      481 cttcagtgca gtaaagcagt tgtaatgctc ttcattagaa taaataaaat aaattgactg
      541 aggctttata aaaactgtgt aacatttaaa atctaaaatg tcaatttcct gttacaattt
      601 aggtttcttc aggcagtttc cacctacatc acatcagtca ttgtcattct ttttggatat
      661 tatagaaatc catgtgggtt tgggttagct ttatgcaaag ctcagtgaag gg
//
LOCUS       KCPA01002424             305 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 266657tic ultra-conserved element locus
            uce-5512, sequence.
ACCESSION   KCPA01002424
VERSION     KCPA01002424.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 305)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 305)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="266657tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>305
                     /note="ultra-conserved element locus uce-5512"
BASE COUNT           71 a           80 c           81 g           73 t
ORIGIN      
        1 aaaaaagata caaaggttaa gcagagcagc cggcatctgc acactaatga catgattgtt
       61 atgataggtg tttgctttac cctggagtgg taacattata attcatccac tgctgaatga
      121 gtggggacaa ttaatgcagt caatgtgtcc cacgtgttcc ctgcagcatt aacaaggcag
      181 ctccaggccc ctcggcatac acggggctga aaattgagcc ggctctcccg ttgaatgtga
      241 tgctgattac ctccgcgggg gccacctgct gcttcgcgcc tgctggtgtg cgccggccgc
      301 ccctg
//
LOCUS       KCPA01002425             627 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 266768tic ultra-conserved element locus
            uce-918, sequence.
ACCESSION   KCPA01002425
VERSION     KCPA01002425.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 627)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 627)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="266768tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>627
                     /note="ultra-conserved element locus uce-918"
BASE COUNT          189 a          149 c          102 g          187 t
ORIGIN      
        1 caatttcata ctaagcaata acacttcatt ttacataagt tttatctgat gtccccatac
       61 agagctgcca gctgtacagc aaatgtgcag ctctcaaact gaggcctact aggccacagg
      121 ctccatcctg agatctgtaa ggcaccttgc tgtcattggc aagcgttccc tgctatcgtc
      181 gctaccatcg ctccacacca cacacaactt aaaatcatct gattattaga atttgtggtc
      241 cacactccat tttatccttt atttaatcta tccccagatc acacatttgt ttaaatgttt
      301 tggctagttt acaaatcatg cagccatctg cacagtaggt gtgacaccat tttttagaca
      361 aaagttacat tacaaaacaa caaagataaa gtcatttgaa atgctttggt gtttgttatt
      421 ctgcctggtt ccaactctaa gaaataaata gaattatctg tgtaaatcga tgaacatcta
      481 tgaaaaacaa cacccagcag aacgcagagc ttgctccatt acctacgtta atatcatgac
      541 agctgaggag agatgacctg gcccacttct catctctcct gtacagatgg ctattaaaga
      601 gaaagtatcc cttttgtatg gtccatg
//
LOCUS       KCPA01002426             798 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 266879tic ultra-conserved element locus
            uce-6059, sequence.
ACCESSION   KCPA01002426
VERSION     KCPA01002426.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 798)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 798)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..798
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="266879tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>798
                     /note="ultra-conserved element locus uce-6059"
BASE COUNT          236 a          130 c          152 g          280 t
ORIGIN      
        1 agttgtagat gttccttact actgtcatct ttatctcaaa gctgttcaga agtgaagaga
       61 tgaattttga gtcctcaatt agtaattaat ttgctttcac tattaacttg tattgtactt
      121 acagaaccgt ttaacataac agagttaatc aagtatgtaa ctactgaagt tgaaaattat
      181 gtgcagatgc tgtaacttgg aaagtgattt atgtgttcac tgttaatttg cagttaaatt
      241 ctaaatcttc atggtcagaa aatctagaag tggttttaaa tggatgatgc gtttttaatg
      301 tttcttctct ccctccaaag aacagcaata gtagtagatt taacaatacc atagactcat
      361 gactatgaaa tcgtggctat ttgtgttaac atgttgttcc tgttgttgat gtgatacaaa
      421 gctcctgcaa aacagctggc acagtccagt gcactggctt ccctcactgg actcggtaag
      481 tatgttcctt atttttgaga gggcttaaag ggggagtctc acttttgcct tgcatttcta
      541 aaaattgcat tttgaaacta gattttaatt gcctggaagt atgggtcact ttctaataac
      601 tttttatcag cacctttcac aggtgatcct actgatatat aagtgggata gttgctggag
      661 taaaggacta ggcagtgtga tgagaatctt gccctaattt tgaaaatatg tttttagata
      721 aaaaactatg ataagcacat tgcagccttc aaagaaaggt ttcatacttt tcttctgttt
      781 tgatccatgc aaaccaga
//
LOCUS       KCPA01002427             403 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 266989tic ultra-conserved element locus
            uce-3789, sequence.
ACCESSION   KCPA01002427
VERSION     KCPA01002427.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 403)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 403)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="266989tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>403
                     /note="ultra-conserved element locus uce-3789"
BASE COUNT          129 a           94 c           61 g          119 t
ORIGIN      
        1 ccactatgcc tatatgtgaa acaactcatt tttccagaac taaaataaaa catccaaaat
       61 actgaaaaaa taattttacc tgtaaattgt tttctgtgac tctgttccac caaaccatat
      121 tgatgggtac tcctgtttta cacctgtcag ccagacagcc aatagggttc tttgattttc
      181 ttgcttttga tcccaccgga actatcctct catccagcat ccccagtcga tacttcctgg
      241 gctatgaaaa agaaggagag aaaccaggcc actcctaaca accctcaaaa gctacactaa
      301 aataggatta cactgcgata taattctgga ttggtggaat aggaaacaat ttgcaagtaa
      361 aatttaactg agactgtttc ctttcaatcc tgaccatttc gtt
//
LOCUS       KCPA01002428             423 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 267202tic ultra-conserved element locus
            uce-305, sequence.
ACCESSION   KCPA01002428
VERSION     KCPA01002428.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 423)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 423)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="267202tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>423
                     /note="ultra-conserved element locus uce-305"
BASE COUNT          143 a           82 c           71 g          127 t
ORIGIN      
        1 tacttactac aagttgtttg aaataatttt cagtaatgct gtaatatttg tatatctaca
       61 cagtcactat ctattccata tacacaaaca tccgcctacc cagaaaataa ttgtggataa
      121 ttcaatgttc agattcgata atggatgctc aaataaatat gagaattcca agcaaatttg
      181 tgcaaatgaa aaaagatttc ctctgacata atggcatggt gcaaggctgt ctgtaatgag
      241 ctgtaatttg tctggaagag cattttaaag gggttgatcc atccactgga agaccagcaa
      301 ctgctctgag actagaagca atgagccagc ctgcctcgtc tcagaggaaa ttacaccaca
      361 agcaggccaa atttctgaca acttccataa attatttcag attttcatat ttcaaatttc
      421 atc
//
LOCUS       KCPA01002429             635 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 267312tic ultra-conserved element locus
            uce-3669, sequence.
ACCESSION   KCPA01002429
VERSION     KCPA01002429.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 635)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 635)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..635
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="267312tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>635
                     /note="ultra-conserved element locus uce-3669"
BASE COUNT          200 a          139 c          118 g          178 t
ORIGIN      
        1 tattttcaat ggtgagacat ttgcaaacaa acccaggctc cataaacata aatgtcatta
       61 ttcatagctg ccacaggtag cctggccatc aatgagggga cacatgtaaa acatccctga
      121 ttatcaaacc atgtcacatt ccttctattc gatggcactt attgggctgc agattccata
      181 atccttccct gagtcccttc tgcatttaat tcagttcagc cttaagtagt taaagaaact
      241 gttttcagtg gcaactaata actactgacc tacagtgaca ctgccctaca atgggcttgt
      301 caggcctgaa aaacttgtac caaagaagct gattaggact tcaagaggtt tgtagcaaga
      361 atcaatggct ggtctgtgct aatgctgcgg ctgcggcaca ggaatgataa aagtggaaca
      421 ccattagtta tgcctcatta agctccacag ccctcctaaa aagaaatttg tttagcctgt
      481 ccaaaatcta atgcagtttt aagctctctg tgttcaattt catagtatct caaaagcttc
      541 aataagataa aggccaaaga accaagaacg gtaccaaagc accaacagta aagttaattt
      601 tgaagcctga gttttaatgg aaagtgtttt tccct
//
LOCUS       KCPA01002430             817 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 267424tic ultra-conserved element locus
            uce-7652, sequence.
ACCESSION   KCPA01002430
VERSION     KCPA01002430.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 817)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 817)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..817
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="267424tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>817
                     /note="ultra-conserved element locus uce-7652"
BASE COUNT          252 a          146 c          149 g          270 t
ORIGIN      
        1 aaacatgtcg gggaagggat ttacagcagc ttgcctctcc agacaggaac aaccaagcag
       61 gaaaaggttc tccctgtaat ttattgctga taccttcatt ttaaacacta ctcagctcag
      121 catgcatggg tgttaaatat tctaggttaa taaaatagcc atctcttctc tacgcaaatg
      181 cgcaattctt ttaattcagt ttttcaaact tcatttccaa atgtcttgga aaaatctgtt
      241 ttggaaggca gctggaaatg cactatttgc acactgatct atactagcag ccattcattt
      301 tctctgggag ttttcatgta agctccctta ttgggaatat gctaatggca accgccatga
      361 ttactgattt tctttgaatc attattcctc tgtgggcaaa gcaatcagaa agggagaaca
      421 ggagatttac ttcttgcttg tgtgccttct tcaaccatct gctctatcct gattcatttg
      481 aataagatct gcagttttag attcttttct ctggcattct gaagcatttt aaagcttaaa
      541 aggagttaat agttatctat cagtgtcaca aacgtggtac tgtgatgcat tctaaaagca
      601 agtttgcctt ccaatggttt acagggccag attaatttta ttaaagtaaa aaattacaat
      661 gttctttaac agcttcatta tttcagacaa gtcttttgtg agcacattta ttatctggag
      721 cgtggagtat aaaagctgaa agaaagggaa ctaatttata aagcaagaac attttaaaaa
      781 tggaaattgt taatctagaa ggcaaaattg tgatcaa
//
LOCUS       KCPA01002431             723 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 267533tic ultra-conserved element locus
            uce-1929, sequence.
ACCESSION   KCPA01002431
VERSION     KCPA01002431.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 723)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 723)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..723
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="267533tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>723
                     /note="ultra-conserved element locus uce-1929"
BASE COUNT          227 a          123 c          128 g          245 t
ORIGIN      
        1 ggagatttca atctgcaaac atctatcaat ccagcacatt acatggaggg ggttttgttt
       61 gttttgttaa ataaatgcct gtattcttct ctatgctata aacacatcag tgctcatttt
      121 ctccatattc tactttgggc cattctgtgt aaaatcttta attaaagttt ttctttgaaa
      181 ttgtcatcat caaaccagaa gaaagaaagt aaaaaatgga aggacacagc tgtgcatata
      241 tgaagtgcta ttcagtacca aatgaattgg aacaaaataa gtatcgtgac tgttatgctc
      301 ttagttttgg ctctgtattc tcagtagcac agtctaactt gtcactttat attgattcca
      361 tctgtttaca ctctgcagag tattggcttc ctacagtgaa catttcctat ttaccagctg
      421 gtaaagatag gcccaaacca gatagaaaag aattagacta ttttcagatc ctcataaaca
      481 taaaatcaaa aattaatggg ggaagggaga agggagggag tggaatatat gggtctgatg
      541 cttgtttcat attgatagtc aatccattaa caacctttgg aaatttgtgc aatgtgcatt
      601 cttttcactc ctcttttctt tcttctttac atgaacagcc tgattgtaaa tgtgaatcaa
      661 tcacagtact tcagtaatct ttaaatagaa acagttgggg tctgaatggc taatataata
      721 ttc
//
LOCUS       KCPA01002432             596 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 267642tic ultra-conserved element locus
            uce-6167, sequence.
ACCESSION   KCPA01002432
VERSION     KCPA01002432.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 596)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 596)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..596
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="267642tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>596
                     /note="ultra-conserved element locus uce-6167"
BASE COUNT          173 a          102 c          118 g          203 t
ORIGIN      
        1 aaatttagca gagctagtct taattttcac tagtttataa aaattttcat tctttactgt
       61 agagaaataa attgcatttc tttcttaagt ctttgtttgt ttaaaccctg tatggttgca
      121 tttaacattg gattaggtag ggtaagagtt tactgagaag ctgtatttgt acagagccca
      181 cctcctgtag tgtgagcagt ggtaagtgaa ctgtttctgt gttgttcact cactctgtca
      241 gatcgaaact cagctcaata gcattaaact agctcccatt tgaaagattt gtcttacaaa
      301 accctgaaaa ctgctctgaa catgcataca ttgattttgt tgctggaatc tcctgagctt
      361 tgatgaaaag gagactccac atgcaggtga aagagggttt acctcttcaa tattaaaaag
      421 agaagattaa ggatttttgt tcagctaaga ctgaactaat cagtgacatg tgaaggtaag
      481 agactggcct cacgcctgta gtatgataat gttattttct ttagttgaac aactttctcc
      541 agtagctctg tctaccagta ttcccatttg cacaggtaat tgaatatcta ggggtg
//
LOCUS       KCPA01002433             611 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 267753tic ultra-conserved element locus
            uce-1177, sequence.
ACCESSION   KCPA01002433
VERSION     KCPA01002433.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 611)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 611)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..611
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="267753tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>611
                     /note="ultra-conserved element locus uce-1177"
BASE COUNT          139 a          170 c          154 g          148 t
ORIGIN      
        1 agcgtgagct ggtgcagtcc ctttgactct gagataccgt ttgctgaagt gaccccggtg
       61 ccgagctagg tgcggctcac cgaggggagc cccgcgctgg gcgcctgctt cccgccccgc
      121 agctccgccg ccgcccgggc gccgcctcgg cgcgacaccc tgctccggtg actcctccta
      181 ttccttgtga ggagagctgc ctatctgatt ttggagctct ggcaaaaagc ctgagctcat
      241 tgattacaga tcactgttaa taaagagcat ttgtaatgca gcagtggtga tacaatctcc
      301 acacgccggt tcatgatggc ccttcagtcc ccacaattaa gtcgtccagc aggcatgccc
      361 cctggtacag ctgctctgtc aatctcattt tgtactacaa atgatcttag acccagtgtt
      421 tgacatgggg ttttagcacc aaagaaggca attctgcaac ttcaaatgag cctaattggt
      481 tgtgcgctca ggcgttcact caagctgctt cagtccatca gagagagatt tccaactaat
      541 tgaacagctc agaaggaaaa gaaccagaga aatcacaatg cactgggctg cttgagaggt
      601 tttttcatga t
//
LOCUS       KCPA01002434             681 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 267865tic ultra-conserved element locus
            uce-7288, sequence.
ACCESSION   KCPA01002434
VERSION     KCPA01002434.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 681)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 681)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="267865tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>681
                     /note="ultra-conserved element locus uce-7288"
BASE COUNT          227 a          108 c          127 g          219 t
ORIGIN      
        1 aatgacaaca tttataagca attttaaaag ataagggaaa gaaaagggat gaagagacca
       61 atttttcttg gcctttctct caagcgcaga catattctgc acaaacccct gttttgatgt
      121 attattttaa ttaatcccag tcttttgatt tctacgaagg ttagcaaatg taacaatgct
      181 cgagagtttc tttatcgtaa aagacacata atttcaagca tttaataagg tagatttatt
      241 ctgggtagtt tagtttgcac attcactcaa acagccctcc ccaaagacaa cattaaaaat
      301 gtgattagtt agctgccatc aataacagaa aataggaaaa cactctctga agggacagct
      361 ttgtggaggg cactgcacag tgtgtagtaa aaatatatgg cctaataagt ttacatttgc
      421 aggctcattt gttaaaactc ttgaatttct aatttgtgtc ggaaagataa atggatgggg
      481 cctcagtaaa gtgtgagatt aatactgatg gatggggatt cagatttttg ctagcctctt
      541 acttctgtac aacccagtag gcagtttatg gggaaaacca aatgtaaata aaaaaagagg
      601 acattattta ccttggtcaa ggccaattac tagttatatt gttcttttca actttattgt
      661 ttggatataa attatcctta t
//
LOCUS       KCPA01002435             554 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 267975tic ultra-conserved element locus
            uce-2160, sequence.
ACCESSION   KCPA01002435
VERSION     KCPA01002435.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 554)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 554)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="267975tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>554
                     /note="ultra-conserved element locus uce-2160"
BASE COUNT          178 a          116 c           97 g          163 t
ORIGIN      
        1 ttcaaggcca tatggagtaa tatagttttt ctcactgtag taaaagaaca aaacatgtca
       61 ttcctaaact ccacaagcat ttacactttc aaggtttttt ttccttgctc atatccctgc
      121 aatttaagaa agctatctat ggaagatttg tatttatact acacctattt cttgttgcac
      181 tcttctgggg atgccagaga tggttttcct cctcctcaac tttcgtctcc gctgtagtac
      241 agattgtgaa tgaacaagag agcagcgtat actagcctct ctgtcaaaac caactcctgc
      301 aacccataaa taggtctcat tagcctttag aaatagtaaa caaattttca tggctggaac
      361 acagtggagg tatgtgagct tggattaagc ctgtgaataa acataaggga gcccttatgt
      421 agctcttatg taaattttat cacagtatat cacagtttta catctaattc cagctccccc
      481 tcagcagcct ggtctgccaa aaataacaga aggcataaaa agaactgaaa aaggaaagaa
      541 aatcaggaag gcaa
//
LOCUS       KCPA01002436             503 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 268087tic ultra-conserved element locus
            uce-2033, sequence.
ACCESSION   KCPA01002436
VERSION     KCPA01002436.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 503)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 503)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="268087tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>503
                     /note="ultra-conserved element locus uce-2033"
BASE COUNT          174 a           92 c           69 g          168 t
ORIGIN      
        1 cacttaaaat aatcctaaaa cacattttgt attttctagc tataatctgt agcccataaa
       61 gattttcaga aacattatta atttgacact gatacgcctc catttctaat atcccaaccc
      121 cgcaacattt taaatgcaat taaaagtggt tatgaaagag tgtggacttc cttgtgaagt
      181 aggaaatcac tcttgtgatt aacatgcaaa cgagctcatg ctggcagaat agattggggt
      241 tttaaaaccc caattacttt tgtatgatta tctatttacc cgtacacaga ctattttcat
      301 ttttcatcta atacaaagtc atcctgctta catttttagc acagcaatta atatttacaa
      361 taattatgac atcaagcacc attgagagta tgccaagtaa ataatttacc atgtatatgt
      421 tattaaaata acatctatgg taatatattg cagaggatgg agatatgtta ttggccttta
      481 tacacaatcc agcctaatac aac
//
LOCUS       KCPA01002437             510 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 268198tic ultra-conserved element locus
            uce-6669, sequence.
ACCESSION   KCPA01002437
VERSION     KCPA01002437.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 510)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 510)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="268198tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>510
                     /note="ultra-conserved element locus uce-6669"
BASE COUNT          145 a          114 c           97 g          154 t
ORIGIN      
        1 acagctgctg ttgaaaaggc tttgtccctc ggcagccgtt tccagagtga atggttctga
       61 aactaacaca gatttctgaa cagttttgtt tgcttgcatg atttggaaag gggtccactc
      121 cagaaatttt tccaaacaag atgacgggta ttaaatggtt aagactaagt atgtgggcag
      181 ccaacgtatc tgccacttct aagagcaaaa atagcatgta ccttattaaa agcagcctga
      241 tagggtcagt agcccagtct cagaataccg cccaagaaca atttcaattt taatagcttt
      301 tactatgtat ttcataagca tgcccattga aattgagtca tcaaagcctc ccagttcctc
      361 caagacagat tttagcccga gagcttggag taattatccc actggatgtt agcctgtgta
      421 gctatttcaa cctcgttcat catttcaaac agctacatac tctgcctgct aatttcatca
      481 gatggattag cctctcttac ttgtctatct
//
LOCUS       KCPA01002438             535 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 268303tic ultra-conserved element locus
            uce-2959, sequence.
ACCESSION   KCPA01002438
VERSION     KCPA01002438.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 535)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 535)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="268303tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>535
                     /note="ultra-conserved element locus uce-2959"
BASE COUNT          132 a          117 c          141 g          145 t
ORIGIN      
        1 agcaggggga taggtggggg gaccaggctc acccactcga ccaaagcgca caactttaag
       61 aaagcaaaac atgaggcgga cccggcgaga ggcagagtaa tagtttttta aatggggaat
      121 cacactccgg agtcctgatt ccctttctgt gattgtttca gacttgaagc aacaggccag
      181 cgcggctggt caagcgccct ttgatcgtgt aaatatcctg ctatttccta ttttaatgtt
      241 cttcagattt agtacttgta aataaacaca tgcatcaagg agagattaaa catttttgct
      301 aaagctgctg ttttgcctgt gtttttgggg tgatgtgggt gcatggagca ggcagcattt
      361 gaaatctgtg gctgtgccag ggggacacca taagccagca acgggcacgt gtgggtgtgg
      421 tcctaagatg tggtcgttaa cacccaccca gactctcaca ggatttagga ttccccatca
      481 gccccattcc cgggtggctc atgtttgctt taaaacattt gattttactt gctgg
//
LOCUS       KCPA01002439             812 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 268414tic ultra-conserved element locus
            uce-6446, sequence.
ACCESSION   KCPA01002439
VERSION     KCPA01002439.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 812)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 812)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..812
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="268414tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>812
                     /note="ultra-conserved element locus uce-6446"
BASE COUNT          277 a          121 c          159 g          255 t
ORIGIN      
        1 agatacctcc cagcatcatt tttaatgtca ttacaatatg caggctctgc agtttggcga
       61 aaataccaga cagctcataa aaaactgtgg ctcttatggc actagagata gcagcttctg
      121 tattagattt gtgctacttt aatgctgact tttctgtatc tcaaggctgt ttcatgcaaa
      181 tatttaagct taggtatcct cacaaacaag cagccataac atttcagtaa ctttgtttta
      241 aaagaaagac ttttgaacat gcaggaaata ttagtacatc aaacaaagtg aaagacaagg
      301 tagtttaact tgttggtttg tttgctgaaa gtctaaagta aatatactgt agctaaaagt
      361 gttccatttt tatctgcctg ctgcagtaat ggctgtgtta cttcagggct tacacttcaa
      421 taattgatca gggtttgtat agcaccggct aagagcaaaa ataagagtgt tgctttgaac
      481 aaactgctgc aatgttatag cattaggcac agaaacaaga ttctggaaat atagatatat
      541 aaaaaacagg aaaaagatgg ataagttgga gtggtaaata ctgcttcagg ctagaaagta
      601 atgagaattt ttccatagag agttttgacc tgctattcaa aaattgtttc ttgtcttaat
      661 aaatcctaaa agtgtaattt acttgcaaaa gggaaagaac aaaggcacca aaattctttt
      721 gataacaaca cttgttaagg ttgataagtt gggtttcaaa tgtgtgaaga aaaatgtgtg
      781 acagtttgtt ttaaggtgac aacctaagtg tt
//
LOCUS       KCPA01002440             593 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 268523tic ultra-conserved element locus
            uce-3481, sequence.
ACCESSION   KCPA01002440
VERSION     KCPA01002440.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 593)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 593)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..593
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="268523tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>593
                     /note="ultra-conserved element locus uce-3481"
BASE COUNT          197 a          115 c          115 g          166 t
ORIGIN      
        1 tattaacaat gaaattgaat attgtgaacc tcaatctgtg catgaacaac aataatgcat
       61 gaaaggaatt ttattgaatg caagtacgtg cttgctaaat ggatgctcat aataaagtac
      121 taaagcagcc atttagtact actttgtcct aaaatttcta ccaattgtac tctgtgctgt
      181 ttgcaaaacc aatccgatga aataagcagc taagcatcac aaaggcagtt ttccttggat
      241 ttgtcatcaa gtacttaaaa aaataaatta tgtcctaagg gacaagtgac aagggcccag
      301 gaggctgagg aaaactacct cataaaacgg gagctggcca ccatcaaaca gcagagtgat
      361 gaggccaata ctaaactgga gcaagctgag aataccatca gggagctcca gcaacagcag
      421 caatgggtaa ggagcctggc agcacatcct ttttccctca catgtgtttt cctcatcatt
      481 acatgacatg gtctctgtgc tgtctttgct gttcattgtg atttgcattc ttaaaattac
      541 acaaattgga ttaaaggaaa ttttgcttct actgatagat gagattcata act
//
LOCUS       KCPA01002441             760 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 268631tic ultra-conserved element locus
            uce-7138, sequence.
ACCESSION   KCPA01002441
VERSION     KCPA01002441.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 760)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 760)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..760
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="268631tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>760
                     /note="ultra-conserved element locus uce-7138"
BASE COUNT          225 a          182 c          144 g          209 t
ORIGIN      
        1 tttaaggggg ttagaatgaa gacacactgc tggtgtacag ggagcacaga aggggtaatt
       61 taaaacccat gtttttcctc cccctcaccg aaaacatgcc caacattgtg cagctgtgct
      121 gccagcttca tcactccctc catctccact cttgctaatt aaaaggttga tcacagaaca
      181 atgctcttct cattaatttc agctttctga ttgggcagga ttcccactcg ctccgcctga
      241 tcttttccac actgctgaag ttaatgtgac aggagcccga agatggatta cccgctgcca
      301 tattgcccat cacctccaat cagcagctat cggggtaaac tgattgttct aatttgctct
      361 cattattttt acaatatcag gagaaaataa cgcacacagc tcactgtcaa agctgtgaaa
      421 atcagccatt agttaaaccc agacactgag tggctttatt agaagcactg cagtttattg
      481 attcagcttc ggtaaactaa gataatacct gtcctcttta aacacacttt ttaaggtgca
      541 cttacatagc aagaaaagga tacttctgga aacgctcact gtctcagcct gttattttac
      601 gctggcagac aacaaagatt aagaacaatg aaagcttgac ttccacataa agaagggcaa
      661 aatatgcagc attatctgca cggcagtctg cgtgcatgtc tcagctactc ttctacagtt
      721 taaataaaaa tcatctcagg actagtacgg caggtgaatg
//
LOCUS       KCPA01002442             953 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 268744tic ultra-conserved element locus
            uce-2010, sequence.
ACCESSION   KCPA01002442
VERSION     KCPA01002442.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 953)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 953)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..953
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="268744tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>953
                     /note="ultra-conserved element locus uce-2010"
BASE COUNT          309 a          162 c          155 g          327 t
ORIGIN      
        1 tatattgaca aatatttcta aaaaatggat tggtattttt gctgttaatt gtttcattac
       61 tgacctttac ctctgtagac atatgcagtt ttcgtttttt tgggagagac tttcaaaata
      121 tttttttttt aagtgtccaa tgctcagtgc tagcagtgac atttttacag tctattcaga
      181 agcatatatt tcactctttt gtatctcatt tctttctatt tatttaaaac aacttagcat
      241 ggaaaatctt gcagatttaa gtgacagtga tgatgtacaa tatgcataaa atgagcctgt
      301 ccctacccat ggtgtgtatt gctagggact ccattgcaat atttacagtt aaactaaact
      361 ttttcaaatg aagcaaaatt gcatttgttt tgcagatttg ctcatcatta aatgtgaaac
      421 atttcacatt tgtctttttg agtaattggc tttttaaaat gataaggtgc tctgaacact
      481 tgttatgtgg ataggtctga cgttgtatcc cagaaatcca tatgccatac agacagaaca
      541 gaagaaagat attcacaagc atgtcacaga ttggactgaa gcaagccaaa aaccaaagtg
      601 ccatggcatt aacaatagca ccagatttac tgtcacgatt gcaatctgtg ctgtatcata
      661 gacagaagga gaacttttga taggtaacac ctcagtgttt tttaaatctt tttggcaaat
      721 tatcattttc attatatttt tgcctgccat ataatattat tataatggta ttaagacact
      781 cagacacgca cacacatgca caagcacaaa gtttattagc cctcaacaaa agggctgatt
      841 tacctcctca gttcctcaac aaaaggaagg tattttatta aaaaaaattt ttagggtgaa
      901 tcatctaaaa aactcacggg gatttttcca ataggcatta agtcaataaa agc
//
LOCUS       KCPA01002443             570 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 268854tic ultra-conserved element locus
            uce-5600, sequence.
ACCESSION   KCPA01002443
VERSION     KCPA01002443.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 570)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 570)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="268854tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>570
                     /note="ultra-conserved element locus uce-5600"
BASE COUNT          172 a          100 c           89 g          209 t
ORIGIN      
        1 gcctggtgaa tctttgtcat gattcattat tcctaacagc tatatcaagt gttgcaatta
       61 ctgcacaata tagatttaac tctataatat ttctagattg aaaggagaaa aataatatat
      121 taagtgcttg tgatatcttt atgtataagt ttgagaatca ttaaatagct gtcactcttc
      181 cttcttcctc agcatcaatt agtctactct ggttttactt actccactct gtataatgag
      241 tccctagagc atgtttcatt gcgggagaat gaacacattt ttcacttgcg gtcagtggga
      301 tgtggttaat ttgaaatcac ttaaactatt atatctgtca agcgtggtta ttttattttc
      361 aattcacatc agtgttttag tatgcacgtt ggttactggg ttaaactggc agattaattt
      421 ccaagcggtc tttgcaatgt tgttcttcac tatccttaca tataggctct tgttgaaact
      481 taatatattc ccactaaaat ttacttcaga gaaatctaca ttcaatataa accctcatat
      541 gataaacaac actcaaaaag gtgtcaagat
//
LOCUS       KCPA01002444             608 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 268965tic ultra-conserved element locus
            uce-5218, sequence.
ACCESSION   KCPA01002444
VERSION     KCPA01002444.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 608)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 608)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="268965tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>608
                     /note="ultra-conserved element locus uce-5218"
BASE COUNT          198 a          134 c          115 g          161 t
ORIGIN      
        1 atttcacaaa ataaaagcca gcagcttggt aagatcagaa ggagagaagg ggacttttat
       61 gcactaagaa accagcccta tttcttattc tgaggcttga taattttaaa aaatgtgaca
      121 gctaaaaccc actggcacat gctgcaaaga aggatgtgat aaaataatgc tactcatctt
      181 caaggctgtc agttcagcaa tcagtacttc tattcatctc ccggcctgct aactcagtgc
      241 taccatgcga tagataaacc ctaatccaag tgacagcgtt caaatcagaa ctgatttgat
      301 tgttcacata tgataccaca agacaccaga agcctaaaga gtttataaaa atgcctggat
      361 gtctcttgta ggcacacttc ccctcagaat atctttcagt gtaggataca ccagctctta
      421 aaccaggggt aatttgtagg tcacaaaaat gctttggtgg cacagtcagt tcttatcaca
      481 gtctaactct agcaagagaa ggaaaagctc aaaaataaaa tgtggttcag accttgtgaa
      541 acccacctat tctgctttca agtctccctt gcaggaagtg acttttcttc agctgcagag
      601 accagact
//
LOCUS       KCPA01002445             721 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 269077tic ultra-conserved element locus
            uce-5690, sequence.
ACCESSION   KCPA01002445
VERSION     KCPA01002445.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 721)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 721)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="269077tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>721
                     /note="ultra-conserved element locus uce-5690"
BASE COUNT          199 a          144 c          161 g          217 t
ORIGIN      
        1 gcagtgtata ccccactgtt caaatctgtg gcaaaatatt ctacagagag ctacttaata
       61 aatatcaact tgctccgata gtcattgaga aatacctcaa cagatagcaa tcaatcgagg
      121 gctgagttgg gaaaaataca aaagggcatc aaagaggttc tcattcccag tctattgctc
      181 tatttaaggg tcctataatt tggtgaggtt gtgtgctaaa taatttgtaa gccttcagaa
      241 catccaggtt attgtttgtg gacagatggt gcatcacatt ttattgctta ttccttctgt
      301 ggtttctcat atgcaggact gatgtgcact ctgaagtctt tgtttccttg ctaaaatctc
      361 taatctaaaa caggcaatca agcacacaga cagtgcttca gaaagcataa tcatactttt
      421 aaaaaaaaaa catttcagct gcagttagga agcagatgtg ttccctgaaa atgtaaaagg
      481 ttatcagaag tattaaaata gggaaacgga atttgggagc ggcggggaga gcatgtattt
      541 tctccctgta ctgcagggta ggtgtgcctt ttcctaggct acctgctttg tatctggctc
      601 tctgcggagc tggtgtagcg aaagccttcg gagaccagct tttgcttcca cctttcccct
      661 ttggcagtct ttgtctttta caggcaagga gcagccgtgt tgtgatcctg gaaccacggc
      721 t
//
LOCUS       KCPA01002446             467 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 269185tic ultra-conserved element locus
            uce-6843, sequence.
ACCESSION   KCPA01002446
VERSION     KCPA01002446.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 467)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 467)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="269185tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>467
                     /note="ultra-conserved element locus uce-6843"
BASE COUNT          155 a           68 c           86 g          158 t
ORIGIN      
        1 ttttgccaac cagaaaaata agagaactta tctgaattgt ctgtataata agtttgactg
       61 taactaaaaa gcacataatc actgatttcc agagaaatat gaatattttc taaaaatagg
      121 ctgagatctg ctcttggtag cattgtatcc tagaagcagg aaaggctcta gagagattac
      181 tttcactttt ccctagatat atttagtgta ctaactagca tagttgggat attatttttc
      241 tttggttttg tcagtagcat gtttgaaata aattttatta agtggtagtg tatgtaacat
      301 tgcattgtgg gtagcagttt cctgccttaa cctagccaca tcctcagctg ttatatgaga
      361 caagtttccc atattttctg caagttgaca gaaaaaatac agacagaaga aaataactaa
      421 gaggttagga tgatcttttt gactgtttag aatatctaat caaaagg
//
LOCUS       KCPA01002447             595 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 269294tic ultra-conserved element locus
            uce-587, sequence.
ACCESSION   KCPA01002447
VERSION     KCPA01002447.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 595)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 595)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="269294tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>595
                     /note="ultra-conserved element locus uce-587"
BASE COUNT          187 a          115 c          106 g          187 t
ORIGIN      
        1 ttacgattat tttttatttg catacacatc aacctgacaa aatgaggttt atgctttctc
       61 cactttttag tttccagctg actatcattt tcttttaaga ttaagtaagt aatttattga
      121 actgtaacat caagtattta ttaggaaatc gctgggtaat tttaactgta aaaacataaa
      181 tctgcatcca aggcctccag taactttgtg cgactctgca ccattaattt cttccagagt
      241 gacattctga tatgagctga acagatggaa ttgcaggatt gttctagcaa atttatcata
      301 aaaaatgcat ccgacacctg tgtaatttgc ctaatcattt tcctaataag ctcccaccat
      361 taattatgca cgatttccac aatgcaatca agataaaagt aaatctgatg acttaatacc
      421 cttcaaaata attggttcac ccaacacaag gcctcctttg ctttccatag ccattccagt
      481 taattagaaa aagggtgcac cctgtaggag ccagcagaat ggagcatggt gggaggcagg
      541 cctgctggtt ttttgggcag gagtcaagga tattaactca tgaaagagag gaatg
//
LOCUS       KCPA01002448             610 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 269406tic ultra-conserved element locus
            uce-6344, sequence.
ACCESSION   KCPA01002448
VERSION     KCPA01002448.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 610)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 610)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..610
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="269406tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>610
                     /note="ultra-conserved element locus uce-6344"
BASE COUNT          230 a          104 c          101 g          175 t
ORIGIN      
        1 gtatagccag ccacttacta cccagtgctt tattttctcc ataaagagca ttttggggag
       61 taatttccac agtcaagtca gagtccgccg agaattgatt tttgtgacct cacatattgt
      121 aacagaaaat tataacagga aatacaccat taagtgataa acaaggaaac atggatacaa
      181 ttactttcag aacataattt tatccactct agttttgaaa atgaagagat agtactgact
      241 ggaacacctc aattctgaat gcaaactgta caatctatta tattaaacaa agtcaaaagc
      301 aatgttgaag atcttgaatc tattcaaggc atgcacctca ttacagactt agcaaattaa
      361 aacacaaata ggattagaaa agaataatgt aacaatctcc cactatggtc cctggagcat
      421 taagtcataa attgggattg cattaaattg tgcctgcagt attgaattca gggaaagagc
      481 tataggctga agataaagct tgctaggcta gccaactttg tgttttacac aataaataca
      541 cagtgaattc actgaaatct aaaaaggcat atttaaataa gtatttatat ctcaattaga
      601 aaatgcagat
//
LOCUS       KCPA01002449             503 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 269513tic ultra-conserved element locus
            uce-724, sequence.
ACCESSION   KCPA01002449
VERSION     KCPA01002449.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 503)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 503)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="269513tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>503
                     /note="ultra-conserved element locus uce-724"
BASE COUNT          132 a          100 c          103 g          168 t
ORIGIN      
        1 cccaaccctg ttccattctg ttttggtttc tggggttctg ttgtcatttt atcctaaagt
       61 gctgtttcct cacatttgca tctaccagcc tttttaatgt gatattccat ttaaactgcc
      121 ttttaattgt atgtgctgcc ttggcagaac atgactgatg tactagcgtt aattagggct
      181 ccagtcagca gcctatgcca gctggaaact gagaaacaag cgtaaattat tctgtcatca
      241 atcagctcaa aaatgtttga atcactaatt agtttgcaat ttgggtgaca gtttatctga
      301 cgcaggcggt gtcagaaact tcagatctta gatgaataat ttgccagcaa caagcacata
      361 ttccctgctt ttaaatacat gaaggtttat ctgcatgttg aaaggtggct cagcagtctt
      421 cattaacttc caactgggac tatgtaaatc aggaatcagt gtgaggcact tcagtctgtg
      481 gtggcttagc agatgatatt tag
//
LOCUS       KCPA01002450             664 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 269621tic ultra-conserved element locus
            uce-7053, sequence.
ACCESSION   KCPA01002450
VERSION     KCPA01002450.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 664)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 664)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..664
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="269621tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>664
                     /note="ultra-conserved element locus uce-7053"
BASE COUNT          211 a          113 c          100 g          240 t
ORIGIN      
        1 tattagaatt cttaaacttg ttgaggcttt ccacaacacc ttcctcagat tttaattggt
       61 tttatctagt tccataagag agctctttaa aacaaatcaa agtgtcttaa atcacatatc
      121 ttacccatca gaggtattct ttctataatc tggcaagttt tcctaggaat cgaaatctga
      181 aggttctcaa ggatgaatta gaagacttgg cagcagataa tttatgtgcc ttttgatggg
      241 ctcagtctca aaatgacaaa ataacaatgt tttgtaacag aagggttaaa tcttaatctc
      301 agaggtttac aaagctgcta gtcgcagtct ccttaaaatt taatatacct cgttaatgct
      361 tacttgcaaa cactgaagga tttttatgat tataatcatg tgttacagca cctagtactg
      421 tttctaagca gcatactaat cagcttaatg agatattact gcactttttg ttgactaaag
      481 caaaatccct tttattgttc taaagcttgt cctttatttt ttcccaaaac attatcttgt
      541 tttattgtac accagtaaat atcataccat cggttttttg tcaaatcata aaactatctt
      601 tctcattgta gaatgtgtaa tatattgaat atggttaatg gaaccgaaag ttacaaatgg
      661 attt
//
LOCUS       KCPA01002451             580 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 269729tic ultra-conserved element locus
            uce-6068, sequence.
ACCESSION   KCPA01002451
VERSION     KCPA01002451.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 580)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 580)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="269729tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>580
                     /note="ultra-conserved element locus uce-6068"
BASE COUNT          176 a          125 c          108 g          171 t
ORIGIN      
        1 actgggcagt catttgaatc agtgagtgac aggctgggcc agctctctgt atacattaat
       61 aaattagaat tttaattgtg tctctgactg caggagctgc tccagtactt taatacatac
      121 caacaattgg ctatgttatg gaatccacga tgtggccttc actgttgacc tctgcaacac
      181 aattcccagt ctgactacgg aaactgtttg gtttgatcct ttcaacttat ttgaatcctg
      241 acaaataagc tcacagctga aaggtcaaca cagtcatatt tcatcctctg gagctattct
      301 taagacatct gcacaacaaa gcacttcttt tagtacctga cactggacct agccagcaca
      361 atctctcatt aaaaatgtcc ccagtggaag agtctattaa aaggcatatg gatcagctat
      421 ggatttacca aataaaatat ttttgaaagc attaatgtaa cgctttggat tatggctctt
      481 gatgctgcca ataaaacgta tatttgccca atgacaaaat gcttcatact ttccagaaga
      541 ataatagccc ggctgtaaag cacgaggtgt tgtccagcag
//
LOCUS       KCPA01002452             406 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 269834tic ultra-conserved element locus
            uce-1889, sequence.
ACCESSION   KCPA01002452
VERSION     KCPA01002452.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 406)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 406)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="269834tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>406
                     /note="ultra-conserved element locus uce-1889"
BASE COUNT          135 a           78 c           84 g          109 t
ORIGIN      
        1 tttttgtaaa tcaacaaaac acagcaccag gcagcatgtg cctcatttta tcaaatggta
       61 cacagcttgg taatggcctc cccagataat ttgaactgat ctatggtgat gaccaggggg
      121 acggcaatga ttgtcatgtt agtaaaaaaa atcaaaacaa tcatgttacg tcagttctac
      181 cattaaaaga cttgcttctc tgcaaatttt tgcgctcagt aattaatact ctagggcttg
      241 cagtttccaa gctggtactc caggcacaga gatgccactc acctgataat tatttcagga
      301 aaccatgcac gaatgaatgt gattgacaaa tgcagcattg ctgtaattgc ctcaagcaga
      361 gtcagtgaga aaaggagaaa gaaagaggaa agttaactag ttatgt
//
LOCUS       KCPA01002453             476 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 269940tic ultra-conserved element locus
            uce-4095, sequence.
ACCESSION   KCPA01002453
VERSION     KCPA01002453.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 476)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 476)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="269940tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>476
                     /note="ultra-conserved element locus uce-4095"
BASE COUNT          150 a           82 c           96 g          148 t
ORIGIN      
        1 acacagagcc cttagtgacc ttgctagtcc tctgctgatc acttgtgttt gttgttgtag
       61 gaaggcaaac ataagtatag aagtgttatt gaacagaaaa cccttcaaaa atttcaccag
      121 tcttttgtat tcaagtcgca gagcaatagg gggccgccct gctcagaaag catacttatg
      181 tgagtattaa gaactggctg agataagaag taaagcttaa gagaccttca tcattagctg
      241 ctagtggtgg agattagtga tcctactaca ggattacaga tggaaagagt gctagtgttg
      301 gttaattgtt cattaatgct tgtaaaataa gatagcacta gtaaaacttg ctattgtctg
      361 ctctttcaaa gtaaagcaaa attggatctg cttgtcaata gctgtattga tgttaacgaa
      421 catatttacc agatcatttt acaatgtaaa ctactatcca gctctttcaa cattta
//
LOCUS       KCPA01002454             747 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 270053tic ultra-conserved element locus
            uce-7574, sequence.
ACCESSION   KCPA01002454
VERSION     KCPA01002454.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 747)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 747)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..747
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="270053tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>747
                     /note="ultra-conserved element locus uce-7574"
BASE COUNT          211 a          165 c          143 g          228 t
ORIGIN      
        1 ctccctgtgt tttaataaaa tttttttact cactcaatta caatatcact atcagttcaa
       61 attacaggtc aaagatatgg ggcttaatgt atgtacaggc agttttcttc tcctaataac
      121 ctgtcattcc caggatttga atgtcagaac agagcctgcc gtggtaatgc tacccggcag
      181 cacagtgatg aaaactttgg acaaatcatg aagaacattc cagatccaaa tcatcagaag
      241 gttactgggg agagcctttc atcccgctct gaccccttga tctgacaagt gacacctaca
      301 aaatgaacag ctctccagct taaattgttt aactgtagcc tgatcagttt tattatcttg
      361 ctaatccgga tatcagccat ttcatcagaa tggaagatat gcatatcatg aattattttg
      421 acaccaagac cttttaattt ttgccagcaa tatttcacta caccaatcag ggcctgcagt
      481 cagtgatgct gttcgcctcc tgggatgtca gaggacagtg cactcctgac agcaccaaat
      541 catctgggag ctgtaacgag ctattgctgc aattattatt atctcttgta gtcatgcatt
      601 tcattacagt gcaggcagac agaggcttca gtttcgggcc gctcttattt aggaatctct
      661 gccattttat gggctgtagg gctctgtagt gcaatttctt ttctcctcgg tagacaagga
      721 taggtgaatt tctaataaaa acaaaac
//
LOCUS       KCPA01002455             400 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 270153tic ultra-conserved element locus
            uce-5469, sequence.
ACCESSION   KCPA01002455
VERSION     KCPA01002455.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 400)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 400)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="270153tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>400
                     /note="ultra-conserved element locus uce-5469"
BASE COUNT          119 a           77 c           88 g          116 t
ORIGIN      
        1 tttccttctt ccagctctct gcctgtggga gcatctgtca aggctgagtc agcaccttcc
       61 caggaaaacc tcacaaacac gttagaagac atttcatttt gtcgtctacc taggcacatt
      121 ggactagtat gcaaataaga cagcacaaga acaggaccac agcagcagtg ctaatgctct
      181 aagtgatctt ttagtgtaat tagaatttgt ttcatcacac taatttgaca tggcaaatta
      241 gtgaagctaa gttaaggggg tttagtagag ccagggcgct ggtatgtaca cagaaacttg
      301 tcactaagtc catttgcacg tgggagttgt gtaacatagc agagaagtga caattagtaa
      361 aagctctgga aaatatcagt ttgttttatt tttaatctgg
//
LOCUS       KCPA01002456             216 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 270241tic ultra-conserved element locus
            uce-6465, sequence.
ACCESSION   KCPA01002456
VERSION     KCPA01002456.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 216)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 216)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="270241tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>216
                     /note="ultra-conserved element locus uce-6465"
BASE COUNT           36 a           62 c           77 g           41 t
ORIGIN      
        1 gctgcccctc ccccgccggg gccgggcgag cccttgataa accgttcggg agaacttggt
       61 gtcagggctc cagtggcgca atcggttagc gcgcggtact tatacagcag tacaaagccg
      121 agcaatgccg aggttgtgag ttcgagcctc acctggagtt ttgggacttg gcggcgctcc
      181 cgagccttgg cggtagcgtg ggcccgctgg agaagg
//
LOCUS       KCPA01002457             586 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 270346tic ultra-conserved element locus
            uce-1375, sequence.
ACCESSION   KCPA01002457
VERSION     KCPA01002457.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 586)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 586)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..586
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="270346tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>586
                     /note="ultra-conserved element locus uce-1375"
BASE COUNT          179 a          117 c          108 g          182 t
ORIGIN      
        1 aattattttg gaaaatttaa gtaatggaca aacgaaatct taaatatttt ctacctataa
       61 cagtttttcc ctctgcgtgt gtctgcatgc aatcagtctg tacactgaac actttgcttt
      121 cttctgttgc aggggtactg aggggcttga atcccttcac aaactatgct gtaaccctaa
      181 ctgcttgcac tttggctggc tgtactgaga gcttgcatgc attgaacatc tccactccac
      241 aagaaggtaa agtaatttca aaggtcttga cttccacatt tcagtcatga ataataaaac
      301 aggagaagag ctaaacgctg caaagccatt tgctggaaaa ccccaaccta atttgatgac
      361 aaagtgcatt gccagaccat aattgctcca ttttttgggg ggtgcgaaaa tgaatcaaac
      421 tccataccct ttaatgacat gcatctttaa tagctgtaat gcagattaat gggcttttta
      481 attgctgtta cattgttcat gcaagagcct tgtcattaat atgaagcatc tgaaagatta
      541 atgaaagctt cctcatttta ctatggctca gaagtaaatc tagaga
//
LOCUS       KCPA01002458             619 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 270460tic ultra-conserved element locus
            uce-7173, sequence.
ACCESSION   KCPA01002458
VERSION     KCPA01002458.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 619)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 619)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="270460tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>619
                     /note="ultra-conserved element locus uce-7173"
BASE COUNT          128 a          149 c          144 g          198 t
ORIGIN      
        1 cccgtttcac gttacggcgt gactgttgct tttaacgccg agatggttta aaggccactt
       61 cgacttttca gtgccttttg tgtgagactg tcagcgcccg agccccggcc atgacatgca
      121 cagaccggct ggtttttctc cttcagatca gcgcccctgg acagcttctc tttctctggc
      181 agccgcttca acctgctctg tcatcttcga gttcaatatc tgctgctttg aagtgggatg
      241 ggttggacca ttgtatttgg tcttttgacc ctccatgttg cccatgagca gtgaaggata
      301 acttttgaca agccatgtca gatgtgacag gcaatctagt tgggttgagt ggaaatgtgc
      361 tgtacaagtt tgaagcctta gttgggggca ttttcctggt gttcagtgca tttaaattga
      421 caccagacct cagtgttgtt ccgtgcagag ccgcgtttcc aattttatca gcgcaaatga
      481 aaacctttca tatgcatttt gcatctcatt ccaccaatcc gaggcaatag cccttcccag
      541 ggcatccctc aggaaccaca ttaaatttag aatttttatt ttcgtgtagg aggttatgtt
      601 ttactgttcc gtggatttc
//
LOCUS       KCPA01002459             807 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 270568tic ultra-conserved element locus
            uce-871, sequence.
ACCESSION   KCPA01002459
VERSION     KCPA01002459.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 807)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 807)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..807
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="270568tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>807
                     /note="ultra-conserved element locus uce-871"
BASE COUNT          250 a          134 c          163 g          260 t
ORIGIN      
        1 cccaggaaca aagaaaggtc aggtaaacca tctgtgtaag tcacagtaat agtacctgct
       61 gtttggttta tgcagtggta ctgctttatt attctctaaa atggaactta tccgctagat
      121 caagttaaaa ctaaaggaaa gctgtggaga tggcaaatga cattgcgtgc atctttcaga
      181 acagggcgac agatgtattc cttgattttt gaatagttta ggtttatttg tgaagatggt
      241 gcaccatcaa agaacgtata aagggggctg agaaaaatca ctgtttaata ttgcagaatt
      301 tactgcttcc attctgacca tgagcctaaa tttacacaat gaaatttgat tatctctaat
      361 aacaatatta gatcctgcac tggatggatg agaattgagg tggttttgtt gattgcaagg
      421 gtttaatgtt gcatttcaga atctgatgtg gtttagcctc ccttccatta actggaaaac
      481 ccctgaggtt ttacaattat ttcttaaaga taatacattt aagattgcat tggtaggctg
      541 aagaaaagtc ataaaggcaa gaagggaagc ccttaataac tcttgagatt cagacatgtt
      601 cagcagttag attggctctg acttcaccaa gggtcgacaa tgtgtcattt ccatgaagcc
      661 aaattgccct ctgcctatat gatattaatg tgcaaatcaa tatttcaggg attaaatttc
      721 ccttcttcat tttttatggt ttctacctca ataagtctca agtctattag aagaggctgg
      781 atgatttaaa atctttcact gcagaat
//
LOCUS       KCPA01002460             667 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 270680tic ultra-conserved element locus
            uce-3879, sequence.
ACCESSION   KCPA01002460
VERSION     KCPA01002460.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 667)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 667)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..667
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="270680tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>667
                     /note="ultra-conserved element locus uce-3879"
BASE COUNT          198 a          137 c          111 g          221 t
ORIGIN      
        1 aaacatagta ctttaaaact agatttaatc tataaattca atatcataac atttaaaata
       61 ttttaccctc atggaaaata actgtttatc actttgcctc cttatagtat ccagggagaa
      121 tctattgatg gaaaacctga tgacaaaaaa ttctatcggt ctgaagcaac ttttggagaa
      181 tctgattagg tctcatgctg caatactagg tattccattt ttgccaaagg gccagctatt
      241 attattaaca tcatttgtct gaatcattac tctgcacctt ggttcagcaa acactatgaa
      301 gatggcatgg taataaatga ccgcaggatt ctttcctgct tcagcctgtt tttatctgcc
      361 acctctctac cgtcagctcc atctttctga acctctctga atccccaaaa gggacggggc
      421 gtctatttgt tttccactag gttaccactc tgtctattgt tgtttgcact aaagggtacg
      481 aattcaattc attcttgtga cataaaagca ctgatacagt aaattttttg cccaagagaa
      541 aacacaaagt tgctgaatat gggctaagat gtgaagctct tgtatgtatg tgaaggagct
      601 ttctgagacg gtcttgctca ctaaatattg ttttttctcc accacaatct agacaatcac
      661 cttatag
//
LOCUS       KCPA01002461             650 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 270791tic ultra-conserved element locus
            uce-2068, sequence.
ACCESSION   KCPA01002461
VERSION     KCPA01002461.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 650)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 650)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..650
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="270791tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>650
                     /note="ultra-conserved element locus uce-2068"
BASE COUNT          231 a          123 c           89 g          207 t
ORIGIN      
        1 aaatccatct cagaaagggg cattgcaatt ttaaactaat taggaattaa cttccttaca
       61 attatcttaa tttgttatta aaaccaagat ttcttagtat aattcacaac agcccgtgct
      121 gaagagaaac tattaattac tcaacagaca gtcagctttc aagtgagctg cattttaaaa
      181 acctccttta aaatacaatt gctaaatgcc ttacagtgct gtaatgtgag acaggttcaa
      241 atcttattac tttactgaaa ttaaaaccta agttttaata ctgttcaagt cgaacaatga
      301 ttccacactt tattgctttt gaaatccctt gatgatcata ggaaaaaatg ccctcgagaa
      361 aaagagactc tgttttcgat aaacagaaaa tacagtttgc actcttagcc tctttgtcat
      421 cacaaaaaag gatttaatgc caattcttta aaaaaagact tttttcacaa aatgtgcacc
      481 ttgtgtgcca tttgtaaaat cagctcactt tcttttattt attactgcag cgcggcaagg
      541 caataaagca gctactgata gctaataaat tacatgcctt ttaaaacaat tctccagcta
      601 caaaaacttg taactacaaa ggcttacatt tacatggtac atcatgtgaa
//
LOCUS       KCPA01002462             823 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 270901tic ultra-conserved element locus
            uce-2539, sequence.
ACCESSION   KCPA01002462
VERSION     KCPA01002462.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 823)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 823)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..823
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="270901tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>823
                     /note="ultra-conserved element locus uce-2539"
BASE COUNT          192 a          175 c          167 g          289 t
ORIGIN      
        1 ctttaaactg ctggctgcaa tactgcaaac acattcagac cctggcttgg ccagcagttc
       61 ccccagctat ctgcatgttt actctccagg ctgtatttta cctacagtat tggatactct
      121 ggagtcacag cctatgtctc attgttatgc aggggtggga aatattcctg tacttatttg
      181 cattcattag ctgttgggag ctcttctgtt gaggtctcta gccttgtttt tacagtgctt
      241 ttggcagtgt ttctgcactt ggtgtgcgaa tttttatgat ctgttgcatg ttattcatgc
      301 aatttcctgc cctgtaatgg tatcagtttt ccagacacag aggaatacaa acgaaaaccc
      361 aggagcctgc attagcataa aatgtcccag ttctgtcagt ttgattaatt tgtctctttg
      421 tctccactct atatgataag tgctattaat ggttgcaaca cttcatatgt caaagtcttt
      481 cttcctaatg acttgaaaat gtggtttatt tccccctttt ttgtattatt tttctcattt
      541 agcattccac tcaagtatag atttatgcca tgctctttca ttatcttact ggttgcagca
      601 ctggagtgat tacatatggt gtagggtatg agcaaagatg cgatcccagg ggcagcagct
      661 gctgatgcaa gctgaaaata gatccagcgt atgctcagca cttttcccag aggtctttta
      721 tttattagga acagtcttgg tacaggacag ctcggaccct catttagcaa gatgactttt
      781 tgcctttcaa gaacagtgcg gtgactttgc tctatttact gac
//
LOCUS       KCPA01002463             679 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 271014tic ultra-conserved element locus
            uce-3217, sequence.
ACCESSION   KCPA01002463
VERSION     KCPA01002463.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 679)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 679)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..679
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="271014tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>679
                     /note="ultra-conserved element locus uce-3217"
BASE COUNT          215 a          109 c          138 g          217 t
ORIGIN      
        1 gtgcatgaaa caaagtccaa ctaacttttt ggagttgtag tgtatcactg gtaaatgaac
       61 aaccttgaca tagctaaact atgacagtgt acagttccct ccttgttagc agttccactt
      121 gctttaaagt gcttgtgctt gatgctaaat tgtcagataa agaaaaaaga taattatcct
      181 ggaagggtag tatgtggctt tttaggcaag atgtattcag aataagaact ggatgcttag
      241 aaaatgtaaa tcagatactg aacgtaagga tatcaagttg aggagacatg atgaaggagt
      301 cagtagcatt gaaaattcag ctatatcctc atcacagcgg gaaggtgact tgccttgctg
      361 agcaatttgt cttacaggct tgaatcaaac tcttactgat aaggttctag tttctgagca
      421 ctcatttcat accttatcat ttttctttct gcagaactgt taatgcaatg cttcatggcc
      481 cagaggtcag aattgacctc cttttaatat gcttttaaat atgctgttca taaaaaagtt
      541 acattgtagc tctgtaaatt gttctgaagt tgcatggtac aaattgcaaa tgttatattg
      601 acaatgcctg aagacaagaa taaacttttt tcatttggta tatgaaatcc tgcaaagttg
      661 ttgaaagcaa aggggagtc
//
LOCUS       KCPA01002464             596 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 271124tic ultra-conserved element locus
            uce-2062, sequence.
ACCESSION   KCPA01002464
VERSION     KCPA01002464.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 596)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 596)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..596
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="271124tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>596
                     /note="ultra-conserved element locus uce-2062"
BASE COUNT          165 a          118 c          101 g          212 t
ORIGIN      
        1 attacaagca cccctaaaat ccagcagtat ttttagggtt ttatttagat gatctggaaa
       61 accccaatac agggtttgac ctctttgtca tcagccttaa aagaagttgt ttcataagtg
      121 tgcttctctt tttttttagt tctttttaaa gaaatgcaga agaaaaggtg tttgtaagca
      181 acttcccaaa ttatttttgc catccacaag tttagagctg cctgtttgaa tatttcccag
      241 aaagtattgt tcttatgtga caacaggtca gaaagactct gcattaatta cactaacata
      301 tggttattaa cagattctag ctcagggagc aatactttac aatgttatct tccacatagt
      361 cagatgttag ccatattgtc agtgctggca gctattgttt cactcattta cttcacagag
      421 ctaattactc cctaataata actttacctt ggagtttttc acttgcttgt gccagcaaac
      481 ctgttcacac tacatatgct aattattggc acttattcat tatgttaaga tagctttagc
      541 tgtgcagcct ggctttcggt atggagccag ctggctgcaa agttccacct tttttt
//
LOCUS       KCPA01002465             787 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 271236tic ultra-conserved element locus
            uce-1997, sequence.
ACCESSION   KCPA01002465
VERSION     KCPA01002465.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 787)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 787)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..787
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="271236tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>787
                     /note="ultra-conserved element locus uce-1997"
BASE COUNT          225 a          173 c          150 g          239 t
ORIGIN      
        1 ttttctctca ggagaggttg tccagagttt gaagcataca aggtctcatc ttaatgctta
       61 tatgagtact tctgcccttg gatattattc tcatcttcac aatactatgc aaatcgacag
      121 ctacttccct gtgcttccag ctaggacttc tgaatatagt gtgagtagct ggaaaatagc
      181 taaaaaagag cttaaagttc agccctgagc atgtctatat gtgtgtgata tggatgtgtt
      241 tgtagatgtg tgtactagtc atatactgca gtttgaaaag gggatctgtg taaatcaatg
      301 catttattta actctctcac caactctctc cctgagttaa caccccagca cacacaatgc
      361 tagcgaaggt gattatctct gctagcataa ttcctccgta acatctgctt tcgcccataa
      421 cactccacta atttttccct catttcatta cacataattt tctttcaaca caatctacat
      481 gtattaagtg gtaatgactt tccagttaag agcaaatcga cgccaaggga cccccccctc
      541 gattgcctgc cgtgcctgac tccggctatt aaagataaat ttggtgcctc agaaagctgc
      601 agtaagctaa tcaatcaatt aagcggttag gacatacatt atcaaaattc cacagtgcgg
      661 gggtgcatga gagcatgctg acatacttgg tatgaaaggt tgaaagtcag tattcagtgt
      721 cttctgaaat gaaaactcaa gctattgcac actaccaata gcaactttgg tgtctgtgct
      781 ggtacaa
//
LOCUS       KCPA01002466             498 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 271344tic ultra-conserved element locus
            uce-4730, sequence.
ACCESSION   KCPA01002466
VERSION     KCPA01002466.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 498)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 498)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="271344tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>498
                     /note="ultra-conserved element locus uce-4730"
BASE COUNT          158 a           97 c          113 g          130 t
ORIGIN      
        1 gtggtggatt cagccttatt ccgagggatt cctgctgccc aggagctgaa ccccggggct
       61 ccgagccgca gggaggcaaa gggttaacag cttctgaatg cacaccaagc ccaaagctac
      121 tgggaaagaa tatccaaaaa aataaccagt ttttttttcc agccgctgga ccttattgaa
      181 tgtcattgaa gaaagttttg aatgccagat aaagagaggc gaattaaagt gtgtgacagc
      241 agaggataag caaacacaaa gagaactctg tcacactttg ggcaaaatcc gtgggctttt
      301 taccaagcct cttcgctatg attgaattaa gtaataggaa aacattttct ttcagtttag
      361 agccattaga caaaaacttc aaagcgaata acacttttta atgtgcagct caacaatgga
      421 atctgttttg tgctgaaatg tttaaatggt ttgttgtgca actgtgggct gaaataacct
      481 agactgcaaa atagcatc
//
LOCUS       KCPA01002467             520 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 271447tic ultra-conserved element locus
            uce-554, sequence.
ACCESSION   KCPA01002467
VERSION     KCPA01002467.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 520)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 520)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..520
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="271447tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>520
                     /note="ultra-conserved element locus uce-554"
BASE COUNT          164 a          101 c          106 g          149 t
ORIGIN      
        1 agaaagaaag aaagaaagac cgaacaccgc agtgctgggg tggtgagtgt tcgggtgggg
       61 gcggggaaaa tgctgcagtt ttcgtgaaat aataaggtgg aaaaaaaggc atacaaagag
      121 taggtttttc attgtctgta aaatataaac acagatgaat tctgtctttg gtttgttcat
      181 gcttttcact ctgcacagca gggatgttct taagaagttg ccctctgcga aatttcacta
      241 aatggaaacc gtggaccctg catgatgcga ttataatcac accagccatt ctttttacat
      301 aattttttgt ttaaaatcca gtaatgcttc ttgtttttaa aacatatatc tatatctata
      361 cacacatcta aaacagtgct ggtttacgtc cccccagcaa agtgcaagct gaagctataa
      421 ctggctgtat cccatccaca aatctccatg gactcaaaaa caatatgaaa atttttagct
      481 gacaagaaca tgtctgctgc ctgcagtcac tgcaatagct
//
LOCUS       KCPA01002468             600 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 271558tic ultra-conserved element locus
            uce-6401, sequence.
ACCESSION   KCPA01002468
VERSION     KCPA01002468.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 600)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 600)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..600
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="271558tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>600
                     /note="ultra-conserved element locus uce-6401"
BASE COUNT          169 a          101 c          120 g          210 t
ORIGIN      
        1 ttaattatgg cgcttgaaac tgctttgctt tgcaaccctt tgggtgtaca tgatcaccac
       61 ttatgaaaag atgttaacag gcttcactct ttgaatactt ttattgaatt tagctttctg
      121 aacaggtttt tgaaatcaat atagagagag ttgctaacag gaggtaaact acaaaccaca
      181 aacactttca ataggatagc tctttttata taacatttga tatcattttc acagcatgat
      241 ctctactttc atactgtgat agcttttacc tggagtttag atgattcatt tttgtagtgg
      301 atacttaact tttatatgag gaaaatgcaa gaggagccag cacagcatta aatgaactat
      361 agttgcagca ttaaatgaac tacagtacag taataatgtc aaatgctcag atccttgcca
      421 tcgcacaggg ttggattcat ctattgattc ataagtgagg agatatggag gcctggaatt
      481 ctctctcggt tttggcatgt ctaattcaag tagatttggc actcagtgat attttagtaa
      541 tggtgtgggt ctccatgtgg ctgtgttggt gtcttgtcct catgttttct ttccctgaag
//
LOCUS       KCPA01002469             585 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 271668tic ultra-conserved element locus
            uce-5782, sequence.
ACCESSION   KCPA01002469
VERSION     KCPA01002469.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 585)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 585)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="271668tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>585
                     /note="ultra-conserved element locus uce-5782"
BASE COUNT          170 a          117 c          116 g          182 t
ORIGIN      
        1 gtgtaatgca agctgatgta gagataaatg tgctataaat gtctgagctg tctttggtgt
       61 gaaaggtggg gagaaattca atccctgtac caattttaat ttgtactcac acattagcta
      121 tagctaattt gagaacaatt aaaaggcagg aatgagaaaa gcagatgtgg agcagtggaa
      181 tgtattgcag agaagcttca ctatgtgcta ttttctaaca cgcagtttta tttttgctgg
      241 agtctgccac aaatcctaaa ataccattac agagttagca gatggttccc aagtattcat
      301 acctgataaa gcctcctggg tgatcaagca ctgaaaaatc aatatatttt tcaactttca
      361 atggctagct attcagtttc attacatctc gctattcctc catggctact gtgatatgga
      421 cacttacttc accattgcat taagctctaa tctccaggcc agctgataga ggcagttaat
      481 gaatagctgg agtaccacct cggtatgctt gacaattctt ctgatctcac taggatgttt
      541 caagtactgt gatcttgtgc ttagtaacac cccagttctt ccccc
//
LOCUS       KCPA01002470             650 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 271777tic ultra-conserved element locus
            uce-1560, sequence.
ACCESSION   KCPA01002470
VERSION     KCPA01002470.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 650)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 650)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..650
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="271777tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>650
                     /note="ultra-conserved element locus uce-1560"
BASE COUNT          189 a          154 c          120 g          187 t
ORIGIN      
        1 gtgcagattt ctgcactcct ggaatgagag accccgcaga aactgctcca gctaagcacc
       61 agatacatta aaatttttca attacgtaag gaaggaggcc ttccttactg ttagtccaaa
      121 acaaacatgt gagatttata ttagctattg ttaattttgg ataaagctgt ttatatgaag
      181 aacatagttt tctgccatta ataataataa taaaaacccc acaatgccat tttgaaattc
      241 tggacatagt ttcccccaat ttcaattgct ctcgctccct gagcatttat cagctacctg
      301 attagaattt gtttccacac aaaccattga tcatcagcct attactaggc aaatgacagt
      361 taattaccca ctacattaac cactgggacc tgagacctgc ttctgctgcc atcagtcaac
      421 atgataaatg tggcaagttc agtaatgcat ggccagccct gagctgcctg ctatagtgtg
      481 aacaaccctc aatctcactt ccaggcccag gaaaatctat ggcaatctgc ataattacaa
      541 gctctgggtt aataacagac aaatgatttg ttgcatctaa acaaagtcct tggaatgggc
      601 ctggtctcct gtggctgccc gggctgctgt tgtgccaccg gtgtgcttcc
//
LOCUS       KCPA01002471             761 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 271885tic ultra-conserved element locus
            uce-2953, sequence.
ACCESSION   KCPA01002471
VERSION     KCPA01002471.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 761)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 761)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..761
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="271885tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>761
                     /note="ultra-conserved element locus uce-2953"
BASE COUNT          232 a          183 c          154 g          192 t
ORIGIN      
        1 agtgctgttt ggaacaaagc agttttttag gcacttatgt gctccagata atacaccaat
       61 gacactaaat tgaactcatt tagctgtaaa catgatatta catttgacag cttccagtgg
      121 taaaatacca gagagtccat gctgaggaga aaaaaacaat atggaaggag aaaaactcat
      181 taaaaatgaa gccacaaaag ggccaacaaa gaaataccca acaaaacccc agcatttttc
      241 agcggttaca gccataactc agcacagaca tgcatggtac caaaagcaac ctgcccagtt
      301 taaacagcag agagcaggcg ctggagttta tgttgttcct ctgtttatta aaaacggatg
      361 ggagcacttg acagaaaaat caaacttctg gtcacggctc attaatctct gttgtatctg
      421 tcagatatgt gtgtctagag tttcaacaag gctctagaat caagattact gctgagttct
      481 gttgttttct ctaatttgga atgaggggaa atgctgccaa tcaccctaag caagaggcaa
      541 gcacagggcc acggctgcaa ccctttgcag ccagcatctc cctgcccagt ggttcggatc
      601 tgatttcaga ggcagaaaat cctctttctc ttcctcacca cagcccgttt tggctggcta
      661 cctcttctcc ccttcccctg aaaaccagac tcattgccca ccaccaaagc acatgcctgt
      721 cagcattaag gtgatgacga ggttgatctg atgctccttc a
//
LOCUS       KCPA01002472             352 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 271994tic ultra-conserved element locus
            uce-7707, sequence.
ACCESSION   KCPA01002472
VERSION     KCPA01002472.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 352)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 352)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="271994tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>352
                     /note="ultra-conserved element locus uce-7707"
BASE COUNT          111 a           65 c           75 g          101 t
ORIGIN      
        1 cttggaaaag ttaagcgtga cttcgtaaac atttgtaaat gcaaataaac ctcaaaccag
       61 gtagtttggg tgaagcagga ctaattgcag acaatgaagc tgaaatgact tctccaatta
      121 gctgctggtt ggagtttatt tggaggaact gtcagctcta gcgatggata attgctttat
      181 tgctcacaaa actatcatct atttagaaca tatgtgctaa ttactctgga tgggcgtcgg
      241 aaaagagacc ataaatctat tagcccttta aaaagtctaa gtgaacgacc aaactccctt
      301 ccttggagct taagggcgag attctcacct ggattgtagt ctttccagaa aa
//
LOCUS       KCPA01002473             632 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 272103tic ultra-conserved element locus
            uce-2784, sequence.
ACCESSION   KCPA01002473
VERSION     KCPA01002473.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 632)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 632)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..632
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="272103tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>632
                     /note="ultra-conserved element locus uce-2784"
BASE COUNT          178 a          147 c          133 g          174 t
ORIGIN      
        1 ttcaaatgta tcccaggaat gcaaaatata attgaatatg gaacagacag gggatcagtc
       61 cccgggagat tgtttcttca aactagatgt taatggtaga gtgagtttta tctccagtcc
      121 ttttatgaat cactgagatg caaacagagt acaccttgcc tttgctgtga gctatgcctc
      181 aagccatggg aagctgcctg ccattcacaa gccagtgcct tgtaggcagc tccatcttac
      241 ctgagttcgc agatgggcca ttccccaggt gggtctggca aaacacttct cattaatcat
      301 tgcttaaagc cctctcagtg ggaagacctc aggttagaca tcatttggaa acaaattggg
      361 tgaaaaatag ctctgacaat aaggagccca cgcagaattc cctggtgaga gcttcagcgg
      421 tgtgaaaaca gactcttcca ggacactaaa tgatctgtca gttagcaaat gacattataa
      481 tccagtttta tgccgcagac aaaccaaagc ctttgctgca tttcctcacc ccctttacct
      541 cctttaaaat gaccaaatac ttgagttagg agaggtagcc atgtaaatgc ttccagggac
      601 gaacctaagt ctttcttgtt gtctctcttc tt
//
LOCUS       KCPA01002474             439 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 272209tic ultra-conserved element locus
            uce-2198, sequence.
ACCESSION   KCPA01002474
VERSION     KCPA01002474.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 439)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 439)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="272209tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>439
                     /note="ultra-conserved element locus uce-2198"
BASE COUNT          139 a           76 c           89 g          135 t
ORIGIN      
        1 atctgtagtc catcacttgg gtagactctt cattttatgg gaaccaccag cccaacagaa
       61 tatcaaagac attctgtggg cttgtaattt gtacacaggt ccggagaact gcactgaatt
      121 aagaaaactt aattttgaca gtcctgatat atagtctatt tggttaacca aaaggaacac
      181 atacattttc tacattagag aaatttccat tatttttctc tcagccatga aaatcgattt
      241 tgatgtgatt actctcagag gctgcttgat gtgcttctga cagtacggac agaaaccgtg
      301 ggtggtgttg aattgaggat actgttgtta gttgaaccct gtcacaaact caaagtgcta
      361 ggattaaaac acgtgccatt aagatattga gcaagagaat gaaaatggtg attacaatat
      421 tttgatgttg aagatcaca
//
LOCUS       KCPA01002475             391 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 272320tic ultra-conserved element locus
            uce-4654, sequence.
ACCESSION   KCPA01002475
VERSION     KCPA01002475.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 391)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 391)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="272320tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>391
                     /note="ultra-conserved element locus uce-4654"
BASE COUNT          112 a           70 c          109 g          100 t
ORIGIN      
        1 tacacatgct ggctagtttc tctgttaggg ggagggaaaa aagaataaaa gtttaataaa
       61 cgtgtgctgt gttgtggatg actttgtggc gacctttgtt gcaaatggcc tatgcatgcg
      121 gaataatggt ctccgtgcag agagggaaat ggcttagtgc tatcatcgtt gcctcggtaa
      181 ccatcagagt ctccatctag cagagagaaa tgagttatga aaaggcttga gtgaagaagg
      241 gattaacaca tgatcccagg gacagcatgt caatcaaaat cagcggagaa attacactgc
      301 tctatttgag aatgtctccg gaaacgcaac ctcggtgggt gtatgtatgc aggcgtgatg
      361 gagagaccta tggctctcag actcctatgg a
//
LOCUS       KCPA01002476             609 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 272429tic ultra-conserved element locus
            uce-5566, sequence.
ACCESSION   KCPA01002476
VERSION     KCPA01002476.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 609)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 609)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="272429tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>609
                     /note="ultra-conserved element locus uce-5566"
BASE COUNT          187 a          111 c          100 g          211 t
ORIGIN      
        1 tttggacaga aagaatatac agatctactt gtcattatga attttcactc cagctggctg
       61 cacatcttgc aacaagtatt atagtatttt tagaaacaat aaaacagttc ttcctcccta
      121 cctgtagagc cagctcttag tctccatcta ctgctgaact tgtttcactg ttactcacac
      181 cattgttaaa gtgcatgcta aaaattgtag attatttctg ttcactgcac actacattgt
      241 tttaccatgg ataatatttt atttataagg aaaataaatt gtcagagtta aaaaacacac
      301 tgcattttgt tctaggcaac acattgcttt tatcacacaa ataatttatt ggttctgctc
      361 ccagacgagt tctgtgctga cctttccagg tatactgaat attgctgcat aattcgtctt
      421 gttgggaaaa tgtatttatt tttgccatta acacatgctg tgataacctt tgtgttgagg
      481 agcaagtttg ctgctttaat tctgatactt tttacagagg ggtaccggaa aacaaaactt
      541 taaagccttt tattctgaag aagagagaaa cctagcatat aagctttgta atggattgaa
      601 aactagaac
//
LOCUS       KCPA01002477             535 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 272540tic ultra-conserved element locus
            uce-3280, sequence.
ACCESSION   KCPA01002477
VERSION     KCPA01002477.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 535)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 535)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="272540tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>535
                     /note="ultra-conserved element locus uce-3280"
BASE COUNT          184 a          100 c           89 g          162 t
ORIGIN      
        1 agttatgaag atgaagcatg aaatgatccc tatggtagaa atttctatgg cattttatgc
       61 accgaatccc tttccctccc acctcccaca attgatgaac agaattcagt taaagggaat
      121 caaaagggta gaccttgtgg aggcctgccg tcaaagccta gctgtgtcag ttgcacagga
      181 agacacccct tttcttccta ttacaagcaa tcaacataat ggaacattat gattaatatc
      241 aggtagtgtt aacagcttta attaaagaaa aaatatgatt gcataaaagc caaatgtcat
      301 agtgcataaa tttagcacca aatcatttgc aagtaaattg aagaattctt tacctgttgc
      361 tttctttctg ttcctctaat catctcattt ttcacaagac agagttttta aaaatactgt
      421 tgataaatca acttaaacat tagtaatgtc tgtcagtata aaaagcaaag tttaccaggc
      481 aagcaaacag gcaaacactg ttacttaaag gtgcttcttt gaggaagttc tttaa
//
LOCUS       KCPA01002478             975 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 272652tic ultra-conserved element locus
            uce-1423, sequence.
ACCESSION   KCPA01002478
VERSION     KCPA01002478.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 975)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 975)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..975
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="272652tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>975
                     /note="ultra-conserved element locus uce-1423"
BASE COUNT          302 a          205 c          176 g          292 t
ORIGIN      
        1 taatttaata gccgagatgg atattgtttc actttcagct atctgctcta tagtcccgtc
       61 tcattctaca ttagatgatt accttacagt cctatatgca caatttaaag ggaattacct
      121 attacttcaa ttatttgttt cttatcaact gatgttacac tacaaggatt tgcattgaaa
      181 ggacacaaag aaagagcaag tcatggcaca ttgccaaata aaagagtaat gttctggtga
      241 atttagccca aataatttac tgctatataa aagtggaaaa gtggaaggtg aaccctttga
      301 ccaataaatc tcttctgcat gtgaaaccct tatcttgtcc cctccaatat attccacact
      361 aggaagccat catcattggc tctggtttgt tatttgtaaa ccttgatctt ctgcactcgg
      421 tgtcctaaat atggataatt agcatcagtt tatcacgcct ctgcatattt tctcttctct
      481 ccaaacatgc atgcttctat tggctgccat tctgtcacag aagattatgg agacagattg
      541 cagagaatga atgtgctaaa cgagattagg aaggaataga aatagcaact tggccaataa
      601 attcctcgtg agagccttat catacaatta cacgttgact tgtttcacac tctcccagcc
      661 tcttaatcca acgcccccac caagaataaa atttcactaa tttctgaatt actgcatatc
      721 ctcatgactt gtcactgaga atggttggaa ggagcaacac ggtcgaaaat agcacatcaa
      781 acttccaaaa agaaaagaaa ctttacagag agaaagagat gtggctttaa gccgccaaat
      841 gtagaagcag cagcagtttg aagggtcagg acttcaatat caggacacct ctgcgctttt
      901 tctcccttta tgccggaggt taccttatcc ttagagggac tttgggaata cagtgcgttg
      961 atgctgctaa actat
//
LOCUS       KCPA01002479             527 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 272758tic ultra-conserved element locus
            uce-7245, sequence.
ACCESSION   KCPA01002479
VERSION     KCPA01002479.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 527)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 527)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="272758tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>527
                     /note="ultra-conserved element locus uce-7245"
BASE COUNT          186 a           95 c          110 g          136 t
ORIGIN      
        1 aagtaggact gcatctttca gtgacacgaa gcacagttga aagaaattac acaatgacaa
       61 ggagaactgt gagccaatag gaatataaaa cgtattcacc ttcttgttat ctcacagcat
      121 tcagatgatc ataacagttt agaaagccta ccgcccacac cacaggatct tgctcctctt
      181 taattttctc taatttgtgt agtgaataac caaatactca taatgcaatt agaagataat
      241 caggcttgta attatgttaa ttgctggaga cttacatcaa tcctccagca aagtgatagg
      301 atttcagggg aactattaac atgggaagag aggaagcaca catgagaaag aaagagattg
      361 ggggagtggg taaattgatg aacagcttag gcttgtatca ttgagcaaca atgagaatac
      421 aacggtgcaa caaatgaaaa gggcctcaag gggagaagct cagaaaatga ggttttaggt
      481 accagcaact caacctcttt tgtctgtttt cttcccataa ataatca
//
LOCUS       KCPA01002480             453 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 272864tic ultra-conserved element locus
            uce-1178, sequence.
ACCESSION   KCPA01002480
VERSION     KCPA01002480.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 453)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 453)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="272864tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>453
                     /note="ultra-conserved element locus uce-1178"
BASE COUNT          145 a           71 c           96 g          141 t
ORIGIN      
        1 ggggaatatc atttgggctg tatgattagg gcaggtgggg tggccattaa tttaagagag
       61 aagaatcttg gcagcatgga ccaacttgca ctgtattatc aatcaagcac ttcttgtgat
      121 gacccagcac tctcaggttt ttgcagcgaa ttcatgacaa aatagatgca aggaaacgtt
      181 ttgtaccctt cataatttta tagaaaattt attgttatta gaggaaccat ttgcttagtg
      241 tgattttttt cattaccagc ttgtcaacta gcatagataa tctggagaaa atatgaactc
      301 catagattgg gtgtcacttt tgttgatggt tcatatagtt taccttggag cacagctaat
      361 ggctgaagtt catagcaaca gcacagaaaa atgtggcacc tagtggaaga caaatgaacc
      421 atgtttattg ctttaatata aaaaatacat aaa
//
LOCUS       KCPA01002481             342 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 272964tic ultra-conserved element locus
            uce-3212, sequence.
ACCESSION   KCPA01002481
VERSION     KCPA01002481.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 342)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 342)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="272964tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>342
                     /note="ultra-conserved element locus uce-3212"
BASE COUNT           99 a           66 c           45 g          132 t
ORIGIN      
        1 gggctgcatg tcctgggagt gctttgcccg caaaagtatt tcttttccat gcttgtttat
       61 ctgttttgtt catttgttat ctttctttca tagaatatct cagcattttt gtctaattta
      121 tcattttcat attttaaagg tccccaggtg catccaattt ttcaacttta ccaaagatct
      181 ctccatctct gtcaaataat tataacaaca tgaacaacag aaagtaagca atatacctta
      241 aaacattact taattaatca ccccagtgtg atataaacaa agttcgctgt tttataactc
      301 ctagcttaag gaattacttt gcaatatttg tgaattgtta ct
//
LOCUS       KCPA01002482             418 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 273069tic ultra-conserved element locus
            uce-4960, sequence.
ACCESSION   KCPA01002482
VERSION     KCPA01002482.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 418)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 418)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="273069tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>418
                     /note="ultra-conserved element locus uce-4960"
BASE COUNT          141 a           94 c           63 g          120 t
ORIGIN      
        1 aagggaggtt taggcatttc ctaccccatc cccctcttct cctctgccta aagattactc
       61 tgcatcctag acaaaggaaa tatttaaact gttaaatctg aacaaagata cagtctgcgt
      121 atgacttctc tgaagcccta taaaaattct ttaaaattgc ctattcactc aaatttactg
      181 agtgtagcaa aaatgtcaaa ggcataaagt cagagaagat tgaataaaat aatgcagaaa
      241 gacagattag tcatgcacag acccacacag cctttcacag cacacaatac cactttttat
      301 taccgctcta tctttacaaa gactatgttc aatacataga ggatgataca tggtcagtca
      361 tgtaatctgc ctttgattcc aagactcatt tatctgggcc cttttcacaa agacattg
//
LOCUS       KCPA01002483             632 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 273173tic ultra-conserved element locus
            uce-2797, sequence.
ACCESSION   KCPA01002483
VERSION     KCPA01002483.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 632)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 632)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..632
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="273173tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>632
                     /note="ultra-conserved element locus uce-2797"
BASE COUNT          185 a          128 c          134 g          185 t
ORIGIN      
        1 aaagtcagag cctcttagct gctgctgctg ctgctatgtg agtggaagcg tctaatacca
       61 ctggcatcag agacagggct gataaagaga caaggtgatc taaagagagc acacatggaa
      121 tttttttttc gtttttctta ccagaaagat aaaggagatg agagtaggtt gatatttgat
      181 gaattggttt tattcagagg agtgctatca tttttatgtc ctttttgaaa atgcacccac
      241 agtgtctgaa ttcccgttaa tgcaaagttc agataaagct gatgaaaagc agctgccatc
      301 ttgatagttg ccatggcaga tggcatcagc ctttatgctt ttatcagtat tagtatcaga
      361 acacactctg tgttccaagc tgagataaaa atcattgaag ctgtacctgg aataggcaga
      421 tcaacactgc aggtcccaca cagttttgaa tcttttcaga acagtctgca taaaagctag
      481 agacaacaca ttcttgttat tcattagttc agcaatgctg atggtatttt gtaaacttca
      541 cagatgaagc agcctttcta aagagctgct gcctcccttc cttcttccct cccaccccca
      601 ggaatgctga ggctttgaaa cggaaagcta ca
//
LOCUS       KCPA01002484             610 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 273280tic ultra-conserved element locus
            uce-6246, sequence.
ACCESSION   KCPA01002484
VERSION     KCPA01002484.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 610)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 610)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..610
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="273280tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>610
                     /note="ultra-conserved element locus uce-6246"
BASE COUNT          202 a          111 c          111 g          186 t
ORIGIN      
        1 taacatggtt agtatttgag aatgtaggac cctccagagg cacaataaaa ttctcatatg
       61 ttttaattca tttacgcatg cttgtgttta atatgctttg tgaccatgcc tgcaattaat
      121 atgatttatg agaaaagaac atgtgcaatt tttttggggt acagtgatac tcccctcctg
      181 tggatgaaag atttaatgaa acagctcaag gaaaatggtt ggcagttaac atattaagtt
      241 gaactgacag aaccatgagt aaactttagc acagttaatg atatcctctt atctgaccct
      301 gacacatttg cagcatgtaa tttacagaag ctctgtccag ggaatcttga caaatgctcc
      361 taacgatgtc agggcaatgt tccattctaa tgtaaaacag atgtgggtca gataccctca
      421 ttcatcacta acactgaaaa tttcaaactc cttccgagat gaatggcatt acctgctgtt
      481 aactctcttc actgtagaga aatctctgca aaagagaaca caaaaggatt gttatcatgc
      541 actataaaga aagataaagt taattagcta tatggatcta tatttatagg atcctagaac
      601 cacattgctg
//
LOCUS       KCPA01002485             728 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 273390tic ultra-conserved element locus
            uce-1420, sequence.
ACCESSION   KCPA01002485
VERSION     KCPA01002485.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 728)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 728)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..728
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="273390tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>728
                     /note="ultra-conserved element locus uce-1420"
BASE COUNT          182 a          149 c          158 g          239 t
ORIGIN      
        1 ctgactggta ttttaaaaga acttttgcac acatttggat acagatgaga acaattaaat
       61 gccctctaat aattaatgta tatgcaatct atggcatgca ttctcttctt attagaggct
      121 gtttttttgt tgcaatctag ctaataaagg ctttcttttc cacaagagaa ttttgacagg
      181 gttgactcca gacggctttc cagctgaggt ctggggcctt gctgaacctt caaaattttc
      241 ccatttgagc tgcatcaaag tgaaggaaat tcaaggatca ctaacgtctc agatggtagc
      301 acttgcccta acaaccaagg ttcaggaatt ctttggagca ggctgaggtc atttttctcc
      361 ccttttctcc taatgctttt ctctattaat cagagctcac agctcagatt ggtcttcaac
      421 ttcctcccaa tccttgctaa gcctgtcatt tctagctatt atttacttta atggactttg
      481 gctgatccct tatgaagctt tggatctgag aataataagg ctggagagta acgggcacag
      541 acatgggtgt gggtttgcct gcagattaac cgtggcagat gggctttatt gcggtttcct
      601 gtgtgccgag tgttgattga gagggtataa tgagagaggt ggtgtctgca caatggctgc
      661 agccacttca ttgcacctcg cgtctaaaca accccatttt tctaaatctt tgggttgtga
      721 aattttag
//
LOCUS       KCPA01002486             719 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 273500tic ultra-conserved element locus
            uce-4212, sequence.
ACCESSION   KCPA01002486
VERSION     KCPA01002486.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 719)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 719)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..719
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="273500tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>719
                     /note="ultra-conserved element locus uce-4212"
BASE COUNT          204 a          165 c          123 g          227 t
ORIGIN      
        1 agagtgaaag ctaaatcctt tggtcttccc ccttcttggg aatggctctg gccacaagtc
       61 cctccatgca agctcctctc gcaaacttga gacaatctac aggtcagctg cagccatttt
      121 tggagcagtg tggatgtctg gaagggcctg ccatgcgaga gccatcacca tggcaaggac
      181 tccctttctc acccagctgt ggactatatt gcatctgaca tgatgagcat ctcttgaatc
      241 tacctttcag attttcggca aaccattttc tcactgtcct tcacaaagtt gacattttcg
      301 gcagcatgat aggaaagatg tcatgtcggc tgcttttcaa gttgttgtca cagtggttag
      361 caccagttct gtcatctttg ctttcctcac aatcccccat cttgagccat gtcacaaata
      421 ataatacttc caatgttttt gtcaaatttc aaatactata acccagttgc acatctttgg
      481 atttactagt tatgttaatc tttgttgctc atcttcccag aagctgaagc attagaaact
      541 cattaattag tgacaaatgc aggatataga tagaactgga aaaacactac ccaaagactt
      601 ccacttaatt tattagctcg ataattttga tacctaatta aatattcaag tcaaatatac
      661 tttgaaaata taatctttct gagggaacat atttattttc ccttttgcaa gaacacaaa
//
LOCUS       KCPA01002487             607 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 273604tic ultra-conserved element locus
            uce-5675, sequence.
ACCESSION   KCPA01002487
VERSION     KCPA01002487.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 607)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 607)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="273604tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>607
                     /note="ultra-conserved element locus uce-5675"
BASE COUNT          185 a          118 c          122 g          182 t
ORIGIN      
        1 ttctttcaat aaggttttca taacctcatg gcacaattgt tgcccagttt ctatgggaaa
       61 cactaagtga aagaaaatga ccatttcaag gggccaacac agccttactg aagatttgtg
      121 ggtacattta ggtagtgttt taattcagat tcgactaaca aacttgtcat tttataaggt
      181 ttgatctcaa tacctgctcc atttctcttt tgggagatat tcatattatc tcttcagcac
      241 aggccgaccg ttccctgcag ctctgctgac tcaaaataat gacttgtagg ggagctctaa
      301 tgacagaaca aggggcaatt acagacacag catgagcttt ggaataactg catgatgcat
      361 tttgtgcagt tgattgaccc tgtgttcaag ttcatttggg ctctgctgct gtagatctgg
      421 cctatgcctg aaggtatatg gtttgttaat ctcaatataa gaagacagaa cagatcgaat
      481 cagatcgttc agacaaaagc aaaactgctc tgctgggaca ataaatgaca gcaaaaatat
      541 gtgactctga aatatcccca cagacagtaa gatctgaaaa acatggtatt ttttcaaagt
      601 tgatctc
//
LOCUS       KCPA01002488             457 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 273711tic ultra-conserved element locus
            uce-1434, sequence.
ACCESSION   KCPA01002488
VERSION     KCPA01002488.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 457)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 457)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..457
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="273711tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>457
                     /note="ultra-conserved element locus uce-1434"
BASE COUNT          154 a           73 c           91 g          139 t
ORIGIN      
        1 ttttaaaatg catgaaaaga accttattaa tacctgtgtg ctgtcttaat tttcagctta
       61 aatttacaga catgctacat ggcaacagta ttaaagcaaa aaaggaggga tacattttcc
      121 tattcaataa taagccgtgg aagttgcatg gggtagagtc tctaggaaat ccactctttc
      181 tttgaaaaaa tgtcattggt gagataggag attggcacca caatgagcaa aatatagtga
      241 gggctgatac ggactgtcag ctggaatttg ggttaagaca ctgacttttg tttgcatgat
      301 gcctaccttc caaagaagat ggaagatgca aaactgaaag tttcctctct ctggttaatg
      361 tggtctatac aagtgaataa tgtataagaa gatgttccct tgataatgtc acaattattc
      421 attgtacagc tataaactca aatattcaca ttaacag
//
LOCUS       KCPA01002489             604 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 273819tic ultra-conserved element locus
            uce-5777, sequence.
ACCESSION   KCPA01002489
VERSION     KCPA01002489.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 604)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 604)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..604
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="273819tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>604
                     /note="ultra-conserved element locus uce-5777"
BASE COUNT          196 a          131 c          114 g          163 t
ORIGIN      
        1 gaagcttcac acaagcagtt ggaaacaagt gtagagtaca aatttaatcc ccctaatccc
       61 ttgtcaatta caaggaatgt cctagagtaa agtatcaaca gtgcagtttc caaacccaca
      121 gaaaaataaa tgaagccatc ctttcccttt ttccacttgg accaattcac cgtagctccc
      181 ttaaaggatt aggaacactg tccgcaataa acatgggcat caatttttaa aatctgctct
      241 gaaaatggca acatttcaca agctgtgaaa atgctttggt ttagggcatg gcctgagagg
      301 caataggcca gcaggatagc actgggatta gccctaatta cctcatgttt caccttaatt
      361 aactactgat acagaaggta aactctgcag gatctgtggc gagaccttag gccagtaggc
      421 agatatctaa gctgccattg tttacacatg ataatctctc gtttgaattt gctttaattg
      481 cgcaaaaaga ttagctgaag gatatgcatt atgtattgat tagcaatgct aactagatac
      541 tgtatctcca caaatgcagc ctagctttta gaggcacaag ccaattgcca aagcatcaac
      601 atca
//
LOCUS       KCPA01002490             686 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 273931tic ultra-conserved element locus
            uce-3584, sequence.
ACCESSION   KCPA01002490
VERSION     KCPA01002490.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 686)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 686)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..686
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="273931tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>686
                     /note="ultra-conserved element locus uce-3584"
BASE COUNT          176 a          161 c          122 g          227 t
ORIGIN      
        1 agctatggca taattattat attactgtga ctattagcaa taatggacag gcagtagagg
       61 tttctagttt tttggacagg ttataaatct cttctttaca ctgtcaagag taagggggaa
      121 acatatttca atagcaacaa attactacca ttatgctaag tgctagatat cccactgtgc
      181 agttttgctt tgtgaatttt taccttcttc catgcacact tttagccact gatcgcacag
      241 cctttcagtg ttttctgcct tttcctttaa ataaactggc tctggctcct tccatctggt
      301 tccccttccg tcagcaaccc tgcacctgtt cacacctcct ctcctgttgg attccactga
      361 acatttcctc ctctgccagg gctattctgg cactcgcaac ctttctgtca ttcaatccat
      421 ctgtcagaag tgaactttgt ttaccgcaag cttctgcttt cttcttcaag aagcaaagcc
      481 cctcaaggtc attgtcaaat gaactgtcgg tgtagattta aatccacttc tgctaaccag
      541 cagcagatgt ttacagtcct gtatttgtga agatcagttt ggtgtatagg agaaatagta
      601 agaagcaaaa gatcattatt tgttaactcc aacagctaac gtgttccctc ttgctaggac
      661 tagcacaatc tgagaaggat tttgca
//
LOCUS       KCPA01002491             673 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 274041tic ultra-conserved element locus
            uce-2262, sequence.
ACCESSION   KCPA01002491
VERSION     KCPA01002491.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 673)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 673)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..673
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="274041tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>673
                     /note="ultra-conserved element locus uce-2262"
BASE COUNT          149 a          164 c          145 g          215 t
ORIGIN      
        1 tatcagtagc tttgtaaaaa aactgcttag ggaggatgag gttcctgtga gtttaatgcc
       61 tccattctcc tgtcccttgc taaatttttg gcaagagctt ttgattgttc ctcttgtaac
      121 cctccagggt tctgcgtcct taaaagccat cttgggggtt tgggatgtta gtctttgcct
      181 tgtaaacctg attttcaata cgactagtca taatcaccaa gaataaagcc ttcacagaca
      241 agtaacaccc gggttatgtg ctgagtgatg tcattaaatg cctgtgtcac tgttgtcccg
      301 ctgcagatac cgagtggcaa tctgggtatg tttggcaata gcggagcagc acaagccagg
      361 accatgcaac agccgcagca accgccagtg caacctctta attcatccca gcctagtctt
      421 cgtgctcaag tgcctcagtt tctatcccct caggtcagat tttccctttc cctggaactc
      481 ttcccgcagc cactgctgcc tggccgtgtc tgtgtttatt tcctaggcag atgtagcatg
      541 gctgagtgtt ctcacatatt acctctgaga gcaccttctc ctgaggagtt tattctcatc
      601 gaacacttga gttattatga ttagagcctc ttgctaattt tttgatagtt atttctggtg
      661 attttccagc tga
//
LOCUS       KCPA01002492             564 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 274147tic ultra-conserved element locus
            uce-1662, sequence.
ACCESSION   KCPA01002492
VERSION     KCPA01002492.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 564)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 564)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..564
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="274147tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>564
                     /note="ultra-conserved element locus uce-1662"
BASE COUNT          172 a          123 c           95 g          174 t
ORIGIN      
        1 tcactttcta ccaagtgtat aatttatcat ctggttttgg tttttccctt catgaactct
       61 tgtggtattc caaatgtata atcttgttgt atttatttcc cagtggtcca acaaaatgca
      121 cagcaagtgc tgactagaac aaactaaaag gcagtgctat tgacaagccg tcacttgagc
      181 agtaatgaac actctgcctt tactttcacc tcaccaaact aacagcttta atttatgata
      241 aagcaaacga gagacaacct ccagttttat tataccctca gtgctgtttc aaatcaagta
      301 attagaaggt caagaggcag gtctagaaag ccaaacacaa atgcaagccc tctgcactga
      361 catttttaaa aaatcttgac tgttcaaaga gcattttatc catccctctt ctgcagagca
      421 gtgtgaggca gtttttacca ccataaccaa tctgaaacag tgtagttcaa ttctttgctt
      481 agtaattcag cccatatgtt cagagagata cttagcagac aatatccctt ctctgggctt
      541 ctgaaaggta caggtgagct ttat
//
LOCUS       KCPA01002493             472 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 274254tic ultra-conserved element locus
            uce-613, sequence.
ACCESSION   KCPA01002493
VERSION     KCPA01002493.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 472)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 472)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="274254tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>472
                     /note="ultra-conserved element locus uce-613"
BASE COUNT          192 a           57 c           67 g          156 t
ORIGIN      
        1 tttccttttc taatattcta ttggctaggg tcctctaagg tttactgttc tataaattac
       61 tgtaacaatt ctatctaatt taccatgcat tttctaaata gttaaatgtc ttctgcctag
      121 tgatacaaaa tatatgaaat attaaaaaaa tcgaaaaaga ggaaaaaata ggaattaaaa
      181 ggcatacatg gcctgttaac agatttcttt atttttcttg gtcaattctc taccatcatt
      241 ttggagtttg ggtagctgta aattttgaaa aattgacatt ttcagaaatt taagaaagga
      301 gaataaaact aacaacaatg ctaagcacac cagtacgaaa acaacaaatt tacacagaaa
      361 ttttagtgag taagttaaaa tgattggaaa tatagaactg cactgaaata gaatgttaaa
      421 atgtaaatac taaaatatgt atatataaat aatgtataat aagaataaat ag
//
LOCUS       KCPA01002494             583 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 274361tic ultra-conserved element locus
            uce-8041, sequence.
ACCESSION   KCPA01002494
VERSION     KCPA01002494.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 583)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 583)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..583
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="274361tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>583
                     /note="ultra-conserved element locus uce-8041"
BASE COUNT          135 a          109 c          154 g          185 t
ORIGIN      
        1 ctggtggtag gtaggacacc tgtgaagttt tctgtgatga ggtttttctt taacccaaac
       61 aaagctaaat ttcaagaaga ggatccctct ttctagaatt tcatgaagtc ctttgccttc
      121 ctatctgccc catgcttttg cctatttgtg tgtgtgcgtg cacatatgcc tgctgcaaat
      181 ttttgtgtgt gcatatttat atcttggtgg ctgtgttgcc aaggagctct gaaagaaagc
      241 agagctgaga taacttctaa tccacctttc tgtgataatg tggcgcaagt gaaaaaagcc
      301 aggggtctgc tctaggtttg gtagactggg gcctttaaca ggcactttgg attttgctgt
      361 ctcagggtta gtgcttggca ggggaggaag caaatatctt ttgctggagg aagacttaga
      421 aactgaatga atgtttctcg ggcctgggca gatgacaact gtgttatctc ggcttctatc
      481 aaagagctct gtttagtttt ccttgtccct tttggaaaac gggtcaaact ggaggtgtgt
      541 aagccctgcc tgggatgctt cctgattaag aagagggatg gac
//
LOCUS       KCPA01002495             511 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 274581tic ultra-conserved element locus
            uce-7627, sequence.
ACCESSION   KCPA01002495
VERSION     KCPA01002495.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 511)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 511)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="274581tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>511
                     /note="ultra-conserved element locus uce-7627"
BASE COUNT          175 a           83 c          115 g          138 t
ORIGIN      
        1 ggtagtttta atacacagga tccattcttg acagaaatga tgaaacagat ttatcacctc
       61 tcctgactgc ttacaacaag aatattaaca gtgatcccca ggctcaaatc acagcacttg
      121 gaacgtgaat taagagtaat tccatgactg aaacctgtag ccctttaaat caaactaagc
      181 agtgttttat taaagtgccc agcaaatcaa tctaaatcca aggataataa agccctaatc
      241 aggtggtaga aaaaataata ggttgtcatg catgaggaaa aataggcaat catggaatgt
      301 tttctttaat taggttgtgt aaagtggaag gactgagtag gatctggcaa gacattcatc
      361 atgagcaagg tgggaaatta ttgagattac tgaggaagga gaattgagtg tgaaatgcta
      421 agatttgact ggacagaaaa ttaaaacccg tttgctgctc gtgtcacttg ctttggcagg
      481 tatggctttt ccaaggagtg ggaatccaga g
//
LOCUS       KCPA01002496             711 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 274689tic ultra-conserved element locus
            uce-4641, sequence.
ACCESSION   KCPA01002496
VERSION     KCPA01002496.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 711)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 711)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..711
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="274689tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>711
                     /note="ultra-conserved element locus uce-4641"
BASE COUNT          213 a          156 c          137 g          205 t
ORIGIN      
        1 agaattcaca tctcagctgc ttgtgcagcc cacaggctca gtaccctgct taaacacttt
       61 ctacagggga ggggaaagcc tgtttaatta ggcattgtgt aggaatgatg aactctatcc
      121 caagtgaggg aggattgcat atctcctcca gatggtgaaa aggcaggagg aaatgggacc
      181 tacctgtgtt ggttttaatc ggcaacttta agcaaactca gtgttctcat cagaaaaggg
      241 gaaaaataaa cagctgagca ctgtgattca tttacacttc aaatatactt tgagttggtt
      301 attcctcaat taatcaaata gctggtgtat ccctaaagta gtataaagtg acacgctgtg
      361 tgaaatcaat tttcccttcc aaaatcatta aattcagtag cctatgacta catccctgct
      421 aattctagta ccggtccttt catcctccat taactttggc acgcctaaca ggctgtcaaa
      481 aataatttcc cagaacgtaa ataattcaga aattaaaaat taataaataa taacagagag
      541 ctactgggag atagactggg tcaattagtc agctctgcat tctgtttctt cgcagcaggg
      601 gggcagccac attcgttact agaatctttc ctccgattcc taggtctgat ttacggctct
      661 tcattactgg atccagtcag acacaattac ctccatcact atctcagttc c
//
LOCUS       KCPA01002497             688 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 274802tic ultra-conserved element locus
            uce-2639, sequence.
ACCESSION   KCPA01002497
VERSION     KCPA01002497.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 688)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 688)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..688
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="274802tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>688
                     /note="ultra-conserved element locus uce-2639"
BASE COUNT          228 a          122 c          121 g          217 t
ORIGIN      
        1 tatctcaaac aaggtaagtg caaacataca gatttattca gatttgcaag catgcaacct
       61 gttacttaac tacatgaata ccttctcttc tagaccaaac tagtatctat atgtttgctt
      121 tcacgaacct agaatctttc ttcaggactc ctaaaacaag cagtgtcttt gaattctgaa
      181 atgacacaaa tatcaagaaa gtccacattg tgcaagaaag cagcagctat gtttctcaac
      241 ttggactaaa aatgaaaaga gaaaacaaaa accgttcact gaacagcaga ttagcagtaa
      301 tgttcctcat gaatcgataa gagtgcctga tgctgaatat ctaacagcaa atgctgaatt
      361 tgggtttaat attttaaagg tttattggag tttaagcttc ttgctgtgct ggtctcttca
      421 aatccctgat ctgtttaact aaataggtct tctcatcatt aaattgttca tcctcggtcc
      481 tgtcattctg aaacttgctg aggaactcaa taagtttggt ctggttcttt agaaggatgt
      541 ctaatatagg ctgtgtcttg ttaggattgg ctacaaacac ctgcaagagc attgagcaca
      601 aacagaaggt taagtttgat gatgataaat taaaactgtg tttcaattat tccagttttt
      661 taaaataaaa gacataagct gaatagca
//
LOCUS       KCPA01002498             820 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 274913tic ultra-conserved element locus
            uce-83, sequence.
ACCESSION   KCPA01002498
VERSION     KCPA01002498.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 820)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 820)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..820
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="274913tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>820
                     /note="ultra-conserved element locus uce-83"
BASE COUNT          245 a          141 c          165 g          269 t
ORIGIN      
        1 tcttatgaca gttttcattt ttttccctcc tcctgacagt tcccataatg actttaatca
       61 tatagtctgg aaatggagca ggttactgaa cagcaacaaa ctcactggtc aatgtcggtg
      121 tcacttttct gggagcagga ctttttgagc atcaaggaac taattttaac agcctgctgg
      181 aaaagtgtta agtgcattaa ctccctgtca atcatgctgg ccaatttggc tcaagacatt
      241 ctattgaaac ttatttgtat ggtattctta tctgtgtacc ttatgtgact aatgatgatt
      301 gtttatggag agatgcctgt ccaattattt ttgaaggaac acaagaatgc agaatgactg
      361 gaagcatcag gtttttgcca gagaatgcct caggtaagag gagaatggct agaggctata
      421 aggaatcaca agagacaagt cagagtcgta aattgggaaa ctgacatatc tcatctaata
      481 tacttgctaa ctaggccttt aaaaaccttg acatttaact aagtttgtgg aaaagttata
      541 tattttgtcc ttttctattg gctataactc attaatatga tgaactgagt gtttataatc
      601 attatcagca ttagctgact agcgatcatt tagagatcca gttaagcacc taacaactgc
      661 tcagttgttt gtgtacgttg tgcctttctc aaaggtcaaa aatgatattg caagttattt
      721 acccttttgg tacttcagtg tatgaaatag gatgaaagaa tgctggtatt cagctgaggc
      781 atttaaataa tgctttggaa gtcctggcct gcttagaaca
//
LOCUS       KCPA01002499             498 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 275019tic ultra-conserved element locus
            uce-230, sequence.
ACCESSION   KCPA01002499
VERSION     KCPA01002499.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 498)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 498)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="275019tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>498
                     /note="ultra-conserved element locus uce-230"
BASE COUNT          192 a           54 c           94 g          158 t
ORIGIN      
        1 aaaactgtcc atgttcgagt gtttacactt aaaagagatt taaacaattt aagattaagt
       61 tgactatgga aaaatattaa taatagatta atacatgaaa atctatgaag tcacataaga
      121 taatgattta aaaaggaata atttaaaaag atgaattaaa aagtagaatc agaaaagaag
      181 gccaacataa actagggaaa aacatgctgt gaataaagtc tgttagatct tgaaatagga
      241 gaactgctaa ataatgcata gttttatttt tctataattt gcataaacct taagagagta
      301 tttatttgtg taaaacttga tgtatcgagg aaggagaatt aaaaaaaatg gcattcattt
      361 tgttttcatt ttggtattta ggaaaaatat tctgttacat atggactact tagacctaat
      421 catctgactg aatgtgatgt gtttcttgag ccaggttgga aagggctggc ttgagaacag
      481 tgccctggtc ttgctgca
//
LOCUS       KCPA01002500             801 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 275130tic ultra-conserved element locus
            uce-5539, sequence.
ACCESSION   KCPA01002500
VERSION     KCPA01002500.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 801)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 801)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..801
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="275130tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>801
                     /note="ultra-conserved element locus uce-5539"
BASE COUNT          241 a          138 c          166 g          256 t
ORIGIN      
        1 gaccacacag agcaagggag gcttttaata ggctgtttgg ggaagagtgg tgtgtagact
       61 ttgagatctt tactgggagc cttatttgct tttggttgcc ccttccatgc cattcccttt
      121 aatttgatgg aaatccagca gtactgcagt tttatgcaaa gcctccagtg aactcaaaag
      181 agattattat ttctcacttt gtctttacag ataactttta tgcgtcagaa tgcaggatta
      241 tctgaagaca caaatgcaac acaacactga caaaatcaga tggaaaatct cactctttta
      301 gctaaaatta gatttatcat cagaaaagca ttctcttttc attttctgaa aggtgctttt
      361 tgacagaccc tttgcagtgg acgtcatgct cacaaaacat gctgtcacag ggctatttga
      421 atatggtgac aggctcatta tcatgttgaa gacaactgac aacactgcag actagaaatg
      481 gacaggcttg ccaatcagct gttgaaagga ttgcagttga aatagagttt tttttgttct
      541 gagaacagta gtacaaattg actacattaa ttctttttat tatggttgct tacactgtag
      601 ttaagggtcc gtcactgttt ccattataaa tccctgtttt caagggttta ttagtagacc
      661 ataaaaaatg gttcctgttc aaatgttgca tatatattac cctaacagaa caaaatttct
      721 gtggtaactg tgtggaggag ggagggcaga gaaagaggga ttgactgatt ttatctgaaa
      781 attgtataaa gctgaatgca t
//
LOCUS       KCPA01002501             561 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 275243tic ultra-conserved element locus
            uce-6519, sequence.
ACCESSION   KCPA01002501
VERSION     KCPA01002501.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 561)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 561)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="275243tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>561
                     /note="ultra-conserved element locus uce-6519"
BASE COUNT          188 a          105 c           99 g          169 t
ORIGIN      
        1 ttactgcact cagttgtcca catcatcttt tgaagggaaa attaattctg aattactggc
       61 cctataactg cctacttctt cacatcatct gtcagcaaaa taagcagaca aaagctggct
      121 aagtggattt ctgttagctg tcatttaaaa ggaaagggac aggtgctgaa tgaagcttct
      181 ttctctgact gctagttaac aatacatata gaagaagttt aattgcttgc atccacctgc
      241 acccttgtca tttcccagct ttattgattt taatgaaaat attaagtgca cttcaggagc
      301 aacagctaaa gtgacatgtt gattgaaata tacaggaaaa tgtataatag aagcaggcta
      361 ttacagtttt aatagaattt gaaagaagta acatctagag cagcagctat tcttctacat
      421 acagcaagtt ctgaaatgag taattggaag ctgaataaat gtttggtcat tgttaaagca
      481 atctttcacc ctaataacaa gtgacccagg ccatatttta ttccattagg tacccttcag
      541 ggtgccacat aaacacaaca a
//
LOCUS       KCPA01002502             579 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 275352tic ultra-conserved element locus
            uce-912, sequence.
ACCESSION   KCPA01002502
VERSION     KCPA01002502.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 579)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 579)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="275352tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>579
                     /note="ultra-conserved element locus uce-912"
BASE COUNT          154 a          122 c          105 g          198 t
ORIGIN      
        1 tttgaagttt tcccccctcc cccacccctt agtttctcaa atattttttg gccttttttt
       61 tttatctttt ctctctgttt gtaataagat taattatgtg tggtgcacca ctgcttatcc
      121 ccatgaaaga aaatctaaaa cgagggattt cagcttcaag aaggctattt tgtcctgttt
      181 ccgatgttct aaagggatta atttaccata tcgtatagcc ctggaagact gtgataattg
      241 aaaacatcca tattcattgc atgttcaaag ggatctgtct gactttgtaa tgtaaaaagt
      301 gcatttttaa cctgaacggg gacctgcatc tggtattgct taatcctatt agtccgacag
      361 ttccaaagct ttagtgtata atcattagct cgtgttaatc ctcagacatg cctccagctt
      421 cagcctgtca gaaggagtcc ctgtagggaa aatatggagg tgctgatagc acaacaccaa
      481 ctaatcttat cttaaatgct agcagcagcc actatctgtg atagccaggg atttaaaaac
      541 aaatttttta tgggtattgg gtatcgcctt cccttctct
//
LOCUS       KCPA01002503             630 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 275463tic ultra-conserved element locus
            uce-7044, sequence.
ACCESSION   KCPA01002503
VERSION     KCPA01002503.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 630)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 630)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..630
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="275463tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>630
                     /note="ultra-conserved element locus uce-7044"
BASE COUNT          202 a          107 c          102 g          219 t
ORIGIN      
        1 attaaaggta attattaaac ttcaagtttc agcaaatgct tcaaatgcag tgtgttgtag
       61 gagctcatat aaactgcacc tgtaagtgac atcttggcaa tgctcttgta cataggaggc
      121 tcaaagctat ttcttgccag cagcagtgat ccacagactt tagatgttgt taaaaagctt
      181 acaatatcag cagggcaact gctgcctcca ttagaaacat gatactaaga tgctgattaa
      241 taccaggagg gggctttaat cagccaaagc catatgctat ttcacttaag atgaaagtgc
      301 aaatgataat cattatttca gaaaggatgt atttaaaaga agagcagaac agcaagtggc
      361 atctttttat cattagagct tcttcatgca gccccttttt ttctaaagct ttataagctt
      421 ttatgaacat ctggatcatt tcttcattat ataggcatcc aatatcatta tgtttgatgt
      481 agtgttttta gtggagttat gctaaatgtc taaatataca attaattcct attaattata
      541 gttttcaaac tggtgaaatt atccatcatt aacttaatca cttgtatttt atcttaaaat
      601 tgtattcact cttttataat ccctacatct
//
LOCUS       KCPA01002504             705 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 275569tic ultra-conserved element locus
            uce-1395, sequence.
ACCESSION   KCPA01002504
VERSION     KCPA01002504.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 705)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 705)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="275569tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>705
                     /note="ultra-conserved element locus uce-1395"
BASE COUNT          215 a          130 c          174 g          186 t
ORIGIN      
        1 tccagcctta tggaacaagg tgccagcatt aaagctgaaa gtgtgggcag gattctttcc
       61 ttctatttac tatccctgcc atcacatttt agacatccac aaaccggtga ctgcaagttg
      121 acaatcaacc agcaccagac agtttttctt caggtggttg ttgcaggggg gttagaagct
      181 cctctctgac acacagatgg ttggcaatgt ggagggagga aagaggtaat ggagggaaaa
      241 gaaatcttac cttggcttca ccagtggcaa catgagcata tgcaattata agatagctgg
      301 cagatgacag agttagttaa tgtaacaagc cctgtaaagc atttagccac attctagtgt
      361 ttaatcagct gtgtaaagtg caatatctat ctttcaattt tatgccatta agggagacaa
      421 gattttgatt aggtacttaa tctgggcaag aggaaaacag gcccagagca agcccacaat
      481 aggcagcaaa agggacattc gacgaaggat tcgataaagg agaaagacag aaatttaaca
      541 taaaagagaa ttagtgcagc tcctttcaat ttagtgcaca gatttttatg gactaatcaa
      601 ttagaggctg tggctgtgct gctgggaagt ggtgccgtgt tagaggcttt gccatattaa
      661 ttctgttcat taccccgagg tcagatggag tgctttggag aagcc
//
LOCUS       KCPA01002505             540 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 275676tic ultra-conserved element locus
            uce-5667, sequence.
ACCESSION   KCPA01002505
VERSION     KCPA01002505.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 540)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 540)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="275676tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>540
                     /note="ultra-conserved element locus uce-5667"
BASE COUNT          173 a          112 c          135 g          120 t
ORIGIN      
        1 ccacctgata aatacaaagc atatttctta agagtggcat tttttaattg ccatgacact
       61 acatacaaag aaatcctcta caaaaattcc agggcagcgt ttgcagagcc tccatccaag
      121 aaataatgca gcacaaggct cagcaagctc accattgcct gtgtgcctgg aggagctgac
      181 taaaagacca gtagcagctg gcaggaaatg ggtaagaaag ctgaccacag ataaactgta
      241 ggatgctgaa gagtagcaga agatatactc tgggagagga agccaagttg tcaggtcaca
      301 ccgtagtcta gtgcatacag tacatacagt ctgctattga agtatgtggc caccagataa
      361 tggtcagggg acacagctgt caggcagcga tgaggtaact ccaaggagcc tgaagcagag
      421 tgtggtacag ctgcggatgt ttctgttgag caggataaag cctgcctgtc tcaagggtac
      481 cgtagcaaat ccagtgtcat gtgagcagta ctaaataatt aggttcaatt taaatcagca
//
LOCUS       KCPA01002506             643 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 275782tic ultra-conserved element locus
            uce-6105, sequence.
ACCESSION   KCPA01002506
VERSION     KCPA01002506.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 643)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 643)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..643
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="275782tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>643
                     /note="ultra-conserved element locus uce-6105"
BASE COUNT          205 a          124 c          157 g          157 t
ORIGIN      
        1 gggatggtgg cgacatagaa ttgctcagta ggaaggactg acagcgtgtc tctggtagat
       61 tatcccggat agccagacct tgttatatgg ttttcatcac aaacataaaa gtatttggta
      121 taaaacagaa ggtcaggaag gtttaagaca tggtatatga gaaaacattt tccagatttc
      181 agcttcctcc aaggtaatat gcaagtgtaa ttaaaacaga acctggaaat atagagtaca
      241 gtaccctatt gaaagtgtgt tgtatgagct gaactccctt cattgatagt tttccaaaac
      301 acacagctgc aataatcttt atccaggaga agggaataaa ttaagtctga acacctctgc
      361 atatagtaca gtacagtgta tagccctgca ccccatataa cctcggagag gtaatggaaa
      421 gctgaaggag gcgcaagtgg aaaacctctc tgaccagcaa acactttctt cttctgaaag
      481 cagacagatg ggaagaaaag ctcatgaaac agaggcagct taagtactag gatgtctcgt
      541 ttctgctcaa gtcgttgaga ctctgcagtg gcagggtgcc aaagcacact ccagatttga
      601 caggtgggga ggggaatgtc ctgggcttgc ccagcaaaca ggg
//
LOCUS       KCPA01002507             605 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 275894tic ultra-conserved element locus
            uce-6945, sequence.
ACCESSION   KCPA01002507
VERSION     KCPA01002507.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 605)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 605)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..605
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="275894tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>605
                     /note="ultra-conserved element locus uce-6945"
BASE COUNT          195 a          101 c          132 g          177 t
ORIGIN      
        1 tcagcagttt ccatttcatt tttgaattat taaaagatca aatgttggaa tgctggatag
       61 cctgaattca tttgtcagat cacgaagtac tcataacatt tctcagcctt aataacacat
      121 ctgctcttaa aatgtggtct cttgataata gctggctgaa agtgtctgaa tttagggatt
      181 atttgagaca acagatttcc ttctatttgg aattgaatga ggcatctgct ccctcaccgt
      241 cagctttgtg ggatattctc aaggcaatca taaaagggca gatcattttg tacattatga
      301 gaaggaaaaa agacctctgt tggcaattac gagacttgga agggtgaatt agagacctgc
      361 aaaggtacca cttcatgtct aaaaattcta gctactccat ccattcggga cacagattta
      421 tctgatgagt ggagagggag ggggaattct cttgtcaaaa gcaaagaaag aaaattaatc
      481 gggaaaggat atatcttgga taactgaccc aacaacatat tagagagatt aggactcagg
      541 atggagagca aggcatggat cccttggagg attaaaggaa attttgccaa tatttatgcc
      601 agttt
//
LOCUS       KCPA01002508             820 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 276005tic ultra-conserved element locus
            uce-1530, sequence.
ACCESSION   KCPA01002508
VERSION     KCPA01002508.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 820)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 820)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..820
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="276005tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>820
                     /note="ultra-conserved element locus uce-1530"
BASE COUNT          224 a          169 c          158 g          269 t
ORIGIN      
        1 gtttttattt gcattttcca aacctatatg acatagcatg cattgtggct attggtatgc
       61 acggacacat cctaatattg tcccccacaa caaaagccat cattctggca gaaggagaca
      121 ggaaaatcta acactctact accatgacca agatggtaag agctgctgca gttgccaaat
      181 acaatacaca aaacatttaa tttataatag ttagaacttg gcccttgacc aagtcgaaag
      241 aactatgtct tatttcactt gctcttgaat atgtctcttt cagagataaa tgactgtgct
      301 gtttgccagt tctctcctct gtttggcgtt ttgtttagct ctgcttgtga caagccaaga
      361 gttgatgcat ctgcttgaat gtgtaatata catctttggt caacttagct tttttccttg
      421 acaatattat gtcaaacaat cacatcacaa ctggctctga tctctttgtt gttagctaat
      481 aaattaaaga gtatttatta tctgcaatcc ttttttccct tttaatggtg acacatttgt
      541 ggtgaattac agggcagctt tataaactag gctgtgggcc agtatcagcc cctgcgttca
      601 tgtgaatgtt ccctctccca cttggcctcc cagcctggtg gtaaatcaag gcagctgtca
      661 cagcacacta agttagtgtg cgtcattggg gagagcagga agcgttgggg gtataattct
      721 gtccatcaaa ctaatatgtt atatcagtag ctttgtaatc ttctgctata agttatggga
      781 agtgacacct aagaattcac tttgaaagca atgtgttcct
//
LOCUS       KCPA01002509             435 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 276112tic ultra-conserved element locus
            uce-3601, sequence.
ACCESSION   KCPA01002509
VERSION     KCPA01002509.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 435)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 435)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="276112tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>435
                     /note="ultra-conserved element locus uce-3601"
BASE COUNT          173 a           70 c           84 g          108 t
ORIGIN      
        1 tgttacaacc aagcatcagc aaaacattgg agttatttat gagcaatgaa atcagccaaa
       61 tgtaacatgc agactgtgca tggtttgaac acaaacctgc cattgtaaaa ttgtaagctc
      121 ctgaagcact gaactgcacg atgtttgatt atcaattagt ttaaaaaatg aaaacaaatc
      181 agatggagtc tattcagcaa tagaaagtaa agtccagtag gactaccttc ctacgtatgg
      241 agatcatttc ttgtagttta gcttccataa catattgata atcatcagat gaggtagaag
      301 aggttggatc agactaacaa gtcaaggaaa aggagaggga caaaattgaa aaatcagaac
      361 taaagacact gacactgaac agaacacagc acagaatgct taaaagaaaa gtgtgactga
      421 aaatttaaaa ctttt
//
LOCUS       KCPA01002510             720 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 276333tic ultra-conserved element locus
            uce-7673, sequence.
ACCESSION   KCPA01002510
VERSION     KCPA01002510.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 720)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 720)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..720
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="276333tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>720
                     /note="ultra-conserved element locus uce-7673"
BASE COUNT          172 a          171 c          157 g          220 t
ORIGIN      
        1 ggcaccattc ttgtgccttc tggtctagaa tgaagtgtgt agctgaattg cctcaaaatt
       61 tgaaataagc acaaaacagt tgtacattat tacagcccct ccccctcccc aagccctgga
      121 ttctagctca gttagagagc tttttccaca agtgtatgtt agctttttgg acatgtaaga
      181 cacccaggaa atcccccttc tcgtaacatt ctccgcttgg atctgatctc aacagggtgt
      241 cgtagtcaat cttcagcaca gttcttaagt ggagaccaag aaccctgggc ctttagaggt
      301 ggtctagcag gagagttcca ggtatcaata tgacttcaca actgaatgac gttttctttg
      361 ttttatgaga aaccttttgt tgcacatcag aggtctggaa ggattggtct gccgaaggct
      421 ttctggtcca aagcccatta gccttacagc ttggtttaaa ataattttcc tcccctttct
      481 acagtaattt ctcaaggaga tgctgcctgt cccacgcgca tgcgaagcgc agcggcttta
      541 gttgtacatt tcacattgtt tctttgcagg tcgcacagca tttttacctg cgcccgcaat
      601 tgcacaatgc gcgcatgctt gtctgccgat gggaattcca tgagcatcgt cgtccaaatt
      661 ttggttctcg aaatgatgct gtgatgcgct ttattgcgag gagttcaatt ggcaaatatt
//
LOCUS       KCPA01002511             624 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 276442tic ultra-conserved element locus
            uce-1133, sequence.
ACCESSION   KCPA01002511
VERSION     KCPA01002511.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 624)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 624)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="276442tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>624
                     /note="ultra-conserved element locus uce-1133"
BASE COUNT          200 a          104 c          109 g          211 t
ORIGIN      
        1 ttgtgaagca tttcctgtga gctgcttggt ttgcacagct caggtaaaat gagttggcag
       61 cacggtgtca agaataaact ttaaaaggac tctctaaaag taatgcttgg aaggtattca
      121 tttgaccttc agtgacaaag cttatgcctt gcaaattgat taatacagat acaatatcaa
      181 atcatttttc atacaatttt ttaatgtttg ttaaatgctg gagcagtatg taaacagagt
      241 atttggcatt tttattaggc tgcggaactc agtcatttcc tttgcaacaa catctcataa
      301 actattttga cagtctaata aactataaaa agctgtggta aaaactggct ctgaatgtta
      361 taaccgtaca aaatggaaag agcaagagaa aacatctatc actgagatta ttatcactgt
      421 tgccatggca acctggttgc aatggcaata tctccatggt tctgctgttt gttatcatct
      481 ttcttgattt tacatcattg aaattgtagt aattacactc tgcctgatga aaaatgcatg
      541 ctgtcatggc aactaagtca aatattctta atcatttcac ctcttcaatc taaaatgtaa
      601 ttgtttgtca gtaaaatagg ttat
//
LOCUS       KCPA01002512             617 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 276555tic ultra-conserved element locus
            uce-748, sequence.
ACCESSION   KCPA01002512
VERSION     KCPA01002512.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 617)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 617)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..617
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="276555tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>617
                     /note="ultra-conserved element locus uce-748"
BASE COUNT          185 a          113 c          138 g          181 t
ORIGIN      
        1 ctggatgcct cttttaattc actaatctaa ggagacaaaa attaaggtac tgctgttggt
       61 acattatttc tgcttaacag acaatatcag taattaaata tatttctgct ggtcttgtga
      121 ccatatgcct gcaaaatgta attcttttaa atttcttttg ttcccaatac tgactgcttg
      181 tcagagtgaa ccctccagat tcctgtgtgt tggtatccat gggctctttc ttgccaagct
      241 gccagtctgg agcgtcacac cttactgcct ttaaagattg ccctgcagag atagaggaaa
      301 atggcaattt ttacatgatg cagtctggca gcccaggaga tttgaagtca aaactggtgc
      361 caagatttac ccaggagagc aagcagaggc gaacctgggc caaagaagaa agaagtgaat
      421 ggcaggaaag catggcagaa tattttttta tcaagtgtgg aacatatgga cactacatgt
      481 tgtttgtatg tgtttattga gagggtcagg gtcctaaaga aagtcaaaag gaagaggtcg
      541 gcattttttg catgccccaa attgtagtag attgcagaat gtaaatgaga caattattac
      601 accaatgctc atcaagc
//
LOCUS       KCPA01002513             633 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 276661tic ultra-conserved element locus
            uce-7775, sequence.
ACCESSION   KCPA01002513
VERSION     KCPA01002513.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 633)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 633)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="276661tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>633
                     /note="ultra-conserved element locus uce-7775"
BASE COUNT          205 a          113 c           97 g          218 t
ORIGIN      
        1 taattgcaaa atatcaatct atctcactta tgaatatgca aatgttatgt cagagtggca
       61 taagtttcca gcacacggta ttctgctagc tttaattaga tcaaaagcgg gtccagctca
      121 attcaacaag atgggcccta ctttttaatc aggaaaataa gtttgtctcc taacagtatc
      181 ttcttttgac agtcagcaaa cactaattaa cagacatagc tatattaatt gcattactcc
      241 actgtattct tatcagctgg ctgatgttgc ctgtttgcta atgcaaatag ttcctgctat
      301 ggtaaagtca acttacaaaa gtctttctaa tgctaactag caatcaatgc atataagatt
      361 tctaagattt ctgtagggaa ttctgcataa tagatgtatt ctgtcttttg aggtatccac
      421 ggccatttag tataattatt ccttagagct gcacctatca tattatcagc ttttttggag
      481 gataaagaac acaacttatt tgtttaagaa caaaggacta ttatcatttc ctttaggaat
      541 cactaaatca ctatgttaaa tgaagatgta tgacccaatg gaaaacttgc atttatagta
      601 attaccttaa gattccttta gcatctttta aaa
//
LOCUS       KCPA01002514             434 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 276863tic ultra-conserved element locus
            uce-2732, sequence.
ACCESSION   KCPA01002514
VERSION     KCPA01002514.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 434)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 434)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="276863tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>434
                     /note="ultra-conserved element locus uce-2732"
BASE COUNT          105 a           66 c          122 g          141 t
ORIGIN      
        1 aaaaaaaaaa agcctcgaga ttggtaattt tctttttggt ggactgcgca ataggtatgg
       61 taattttaaa agagggtgat ttatatgagc ttcagtaaat gctgcatatt gtatttcaaa
      121 gagtttcctg tcgtgacctc ataaaaagag gaggaggctt gtatgtgttg cagtgcctag
      181 tatatgtcga ttttgttgca tcgttgggca gcagcgctgt aagaaggaat gtcagctttt
      241 acataacgct ctttttgctt ttgactctgt gaggggctgt aagggtccat ctttgtgatc
      301 acagatggag tggaatggct tgaaaatggt aagtgaacgg ggagcctgct cgtggggttt
      361 tgtctcgttt tgcctcgcga atttcttttg ttcagggcgg cggatcgcga gtcacgaaag
      421 agagccttgt ttat
//
LOCUS       KCPA01002515             664 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 276972tic ultra-conserved element locus
            uce-3489, sequence.
ACCESSION   KCPA01002515
VERSION     KCPA01002515.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 664)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 664)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..664
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="276972tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>664
                     /note="ultra-conserved element locus uce-3489"
BASE COUNT          256 a          127 c          123 g          158 t
ORIGIN      
        1 ttattacaca aagagcaaac attttcaaga atgagtgcta aagctgtaac actaaatagg
       61 ctcattaaaa gcaacccttt ttactcctgc acccatttta aagccaccaa taagcactag
      121 tcagactgca gaatgtttct accagcaggc ttctgaatat gcacaatgcc aataaagtta
      181 attacatttt agtctatgtg caattaagat actggcaaca ttttaatgca aaaaaaatgt
      241 ttaaatatac taacatccta gtcttgggat atccagtcaa gctacgcaaa gagatgtgtt
      301 tgtcccttgc atactcccaa atgtggaagt aggatcagaa actggatctg gaagaaaggg
      361 taaacagcac gttagttaaa ttcagaacta tgttcggaga tgttgcaaac attagtgaag
      421 acataaatga cccagagaaa aaataaaaaa taactccaaa cactcaacca caaggatagg
      481 gaagaaaatg taaaatgaaa gggacctaga agagcaacag tggacagtca gctaaacatt
      541 tgcattgaaa gacagtctgg agttgcagag gcaccaaaca gagcagggaa attaaagttc
      601 tttccacagt ctttgagcca ataacaatag ccatctctcc acacaattgc cagggactga
      661 aaaa
//
LOCUS       KCPA01002516             660 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 277085tic ultra-conserved element locus
            uce-7295, sequence.
ACCESSION   KCPA01002516
VERSION     KCPA01002516.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 660)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 660)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="277085tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>660
                     /note="ultra-conserved element locus uce-7295"
BASE COUNT          196 a          136 c          104 g          224 t
ORIGIN      
        1 atacaaacca ccaaaaattt acaatacagt ttttcccctt ttgatgcgaa tgtttttctg
       61 tacaagtgtt ttgttatcta atactgttta aaaagctatc agcttcttca agatgggtag
      121 gcatgataat attccaggaa cacttaaata acagttttta caataaattt taggtccata
      181 tcattagatt actttatatg cactggtctc tcatctgatt ttaggcgttt tctacgtggt
      241 tgtataaaat cttcatcgga gtcctcagtt atttcaccat catcctcttc ctgctcaaat
      301 tcaggcaaag gctggaaggt cctgtctgag tagatctctg taagtttatc ttcaaagtac
      361 aatgcaactg ccttccctgc ctgtgctact tctgaatcag cctgtggatg aaagaagaca
      421 ggaatattca cctgttggaa atgcacatcc cttcaccaag tgtgcatggt ctgaaacgct
      481 taccttcaaa ttaatctctt gtgtttctgc ataaacttga acaactttca tcatctaaaa
      541 aggataccag agtctgaaat tataatcctc gcacaggatg ttatggtttg ttagctttag
      601 ttcccaaact tatttaaaac agtctttggt aaataaacct tcaacagaac acacaacttt
//
LOCUS       KCPA01002517             461 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 277192tic ultra-conserved element locus
            uce-392, sequence.
ACCESSION   KCPA01002517
VERSION     KCPA01002517.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 461)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 461)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="277192tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>461
                     /note="ultra-conserved element locus uce-392"
BASE COUNT          149 a           86 c           71 g          155 t
ORIGIN      
        1 gttattttcc taaagattac atttaatatt gttggtgtac cctccataat ttagttgatt
       61 aataatattt gatctaaacc caaattatga cttcccacat atatgacata actaatgaac
      121 tgtgaaagga aagctgttca gatggtcacc aataaccaat gcttagttaa tcctttaaat
      181 aaactagagc tcacaatgtg tccctttgaa gtcataaata atgtatattt ttcttttgac
      241 ttttaataag ccagtggagt tcatctcaca gtctccaaac acatatattt tattatgggc
      301 ctctgcagtt tactttaatt agtgtgtctg agtgctttgg gagacttagc cctactgaaa
      361 acaaacagag tcttaccatc tataaaacat tagctccctt tggtttatcc tgatacagcc
      421 gaggctcagt gagaaacaca tggtgtaagt aaacacacat a
//
LOCUS       KCPA01002518             452 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 277297tic ultra-conserved element locus
            uce-6171, sequence.
ACCESSION   KCPA01002518
VERSION     KCPA01002518.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 452)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 452)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="277297tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>452
                     /note="ultra-conserved element locus uce-6171"
BASE COUNT          170 a           81 c           79 g          122 t
ORIGIN      
        1 atctaagcca tcactgattg ctgttagacc caattttaga ggtttatatc ttcataatct
       61 atcaagaagt aaagctgatc taatttgtgt gcacagcacc actgactgtg gacatttaat
      121 gaacagtgca cttgacagct ttaataaaac acagcatttg ccagcagaga taattagaat
      181 tgaagcagta aaattctagt gtttggcaac acagatgaaa caacttcatt aaaatgtaca
      241 gctttggcga atgaaaggca ggaaagcact ggaccctgaa gaatcagcct tctcaaaact
      301 aattgcttca gtgcttaaaa aggacagcta tgaaatacca agggcataac aaggaaatac
      361 tagtattaaa aagaaaccac agaagataaa tcaagctttt caaataggac tgaactgtat
      421 ttagaccatt aaacttttca ttctaatctt ga
//
LOCUS       KCPA01002519             588 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 277406tic ultra-conserved element locus
            uce-5657, sequence.
ACCESSION   KCPA01002519
VERSION     KCPA01002519.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 588)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 588)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..588
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="277406tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>588
                     /note="ultra-conserved element locus uce-5657"
BASE COUNT          166 a          113 c          141 g          168 t
ORIGIN      
        1 ggcacgagac tccaagagca cgatggcaat ggcagcacag ttttaccttt atctttcatg
       61 ccggcagtag atcagtcagc atggagcgct ggcttcggct ggctcccatc cctccatcct
      121 cttccctgtg actacggccc ttaaatgaaa actttatggc aaagagctgc tgacacttct
      181 tcgtggagaa gatacatggg gtggctggtg gctaatgagt gtcagtactc caaaggataa
      241 tctctgcttc tctctgatac aatttaacat cgtatttccc taatttgagg ctgatttagt
      301 cgctggggta tttggatgcc tcttctatgg tgccgatagt taattaaaca gatgttgcag
      361 agggaatcat taattttagt gctgcagatg ggagcagaat gactttgtga agttaatgtt
      421 tcagcaaaac aataggcttc tgtcatcagt tgctataaac cgagtaaatt aagagaacaa
      481 gtagagtaaa ggagatagct ttgaaagaat atcaattatt cattttagaa ttgttctttc
      541 atcacaggaa gctgggaaat gggaagagag gaatctccaa gtcagcag
//
LOCUS       KCPA01002520             660 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 277505tic ultra-conserved element locus
            uce-1083, sequence.
ACCESSION   KCPA01002520
VERSION     KCPA01002520.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 660)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 660)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="277505tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>660
                     /note="ultra-conserved element locus uce-1083"
BASE COUNT          231 a           80 c          102 g          247 t
ORIGIN      
        1 tttaatgatg acaatatatt aaatgaagaa attaaatgaa aaaattctgg gagggtatgc
       61 ataatgataa gaaagtaaaa tagcagtggt tacattttct atggtagaca taattgatat
      121 gtttgttgtc tgtgattcac acattatttt aaatttctga gagggatttt tattgtaaaa
      181 tattctgcat tttaaatact atttaattat ggtttgtttc cttagggatt atatcaccat
      241 gtgactttaa tttggtatat accctaaggg gcagcatatt ttcaattatg aaatatttcc
      301 tccagaaaca ataatggttc aatgatttat tgcaggatcc tattataagg tgcctcatac
      361 aagtgaaatc tgaaatgcaa ttggcttaac aatatagtat aggcaggact aaaatgcaag
      421 tgaactgaac atatgggcct ttttcacaaa aatcatattt atatactttc atcctttgca
      481 taatacttca attattatat cttgaaaaaa gaacttggaa agctgagagc tatgaaacat
      541 ttacattatt atctcttcaa aaagttcatt tttggacaag tatcatttgg atagggatta
      601 acttaatcag agattttgaa tcttctttac tttaattttt aatctctttt taaaaatatg
//
LOCUS       KCPA01002521             656 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 277614tic ultra-conserved element locus
            uce-4674, sequence.
ACCESSION   KCPA01002521
VERSION     KCPA01002521.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 656)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 656)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..656
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="277614tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>656
                     /note="ultra-conserved element locus uce-4674"
BASE COUNT          183 a          166 c          125 g          182 t
ORIGIN      
        1 cgctctcctt ttgccagccc cagctgagct ttgcttgttt tggagcaagt ccgtggcagg
       61 agcccgggag gaggcggctc aggcggcctc accccctccg ctccagcctc tggccatctc
      121 acattcacaa cgtgtccagc aaagtttgtg tcagggggtt taaacttcag atttgtgtga
      181 ccaaggaatt cccagttctg ttgcatgtgt tcccctgtct cttgtctttc tcttggctgt
      241 gaaacagcac aaggagactc tttgtatgct cctaatcctg aagcaacaca gctttagcaa
      301 catccaggga taaaagcacc atcaaaccac aactttatgg gggcaaatct cctctaatcc
      361 ctcgctttag ctaaacaaag cttcttgccc taatccgcta tcgctttaaa aaaaaaaagc
      421 tcagattttg tttttagtaa gaagatgatc caaaggacta attttaagag agactaacca
      481 actctgacag cttttaaaat agacgacaag aaaatagatg caaactttcc tctcaattca
      541 agggttttca ggctatgcaa taagaaaaat atccagggtt taactgcttt cctttaagct
      601 cacttttatt gtattaaatg ctctgaccaa ctcagattca aatcaccagg cccaaa
//
LOCUS       KCPA01002522             943 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 277725tic ultra-conserved element locus
            uce-1427, sequence.
ACCESSION   KCPA01002522
VERSION     KCPA01002522.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 943)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 943)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..943
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="277725tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>943
                     /note="ultra-conserved element locus uce-1427"
BASE COUNT          304 a          144 c          144 g          351 t
ORIGIN      
        1 aaagctttaa agctattatc tcagcttaaa atttcagcgt cctctacttt tttcttcacc
       61 aaactatcca tttttaaacc acaaatattt ttccagtcct ttcagatttt atctaaaagt
      121 atattttaac agtatttaaa tagttcttaa acaataacaa tttatcttga tagatgacat
      181 gctgtgtttt ttcattttat tttaattagc tattgtggaa ccaaattccc ttttgtttta
      241 ttcctttgaa tactgtttaa ttatagttat catgccaaat atcttaaagg ttattttacc
      301 aatacagttt catttaacat aagccatgtg gaatcaatag tcctgtttcc taaagtgaat
      361 gcttggaaaa tcttacattc atatgttaag agtacacatc ctttcctcat tagctggaaa
      421 gtacagggat tttggcacag gttctgtgtg gaagcattgt gcagctttta tatggatttt
      481 gtttttagcc tttgatgaca ctgtttagaa taggaagtat ctaataagta aagcattttg
      541 tctaatgtgc tgccagtgtg tttaatatat gcctggaggt ctgaaacatt atcttctcca
      601 ctatagtaat atgcatttaa ttctctgaaa gcagaaggtc gaacttttaa aagggactca
      661 aagtacattt tcaactaaaa taatttaaaa cacatgggat aggggaccag agtaatgtac
      721 agttggtttt tatggtttaa tcatgatcat gttaatgcac accagtagct aattaaagaa
      781 aacttttatt gttcatttta aatgggttat gtaaaaagta agaaaattga tattatacag
      841 cccaatggta aatgttacca ttacatttgc taacagcaag atgatattgc tgttcttgac
      901 atctttaaag tattggccca tatattccat aatacagcaa aga
//
LOCUS       KCPA01002523             758 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 277837tic ultra-conserved element locus
            uce-3462, sequence.
ACCESSION   KCPA01002523
VERSION     KCPA01002523.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 758)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 758)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..758
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="277837tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>758
                     /note="ultra-conserved element locus uce-3462"
BASE COUNT          233 a          159 c          115 g          251 t
ORIGIN      
        1 cagcaagttt gatttctttg tcagtgcaac acacagcctg acccattttc ctaagagctc
       61 tcgcacccaa acgctgctga ggctcctttg taaacgaacg acacgcattt aaaatacctt
      121 tgtaataata aataccacat gaacatatgt atcaagcaaa ggatttcaat tttgatgaca
      181 cttgcttctc aagaacagac attctggaag aaaaaaatgt tgccagcccc aaattgattg
      241 acatttgttt acttaactct ctcttcttga aagtctgcac acctatttca accttgaaca
      301 gtttccaact gtggtatact ggaacatttt ttcatttatt aagttcagtg ttgccaaccc
      361 aaacaaagag taatcagtga tgatccaagc agaccaagct gtctagcacc atacaatgta
      421 tctgcatgct aattttcaaa ttccctcaca tttccagaga actaatggga tcattttcat
      481 tctgttacag caactcaaca gttactgaat caccatctgt gttttcgtta acctgaatca
      541 gatataaatt ctgttattgc aaggtagagc agcttgttta atgattctta atcttttctt
      601 taattaaatc atgcagccaa cctgaaaaat ctatcttaat gcaaattagg agcttttttg
      661 gcattcgctt acagtaatgc actaataagg ttaatttatg aaggttctct tccagtctgt
      721 acagatgata tttgttcgct gcatattttt agcatatt
//
LOCUS       KCPA01002524             682 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 277949tic ultra-conserved element locus
            uce-131, sequence.
ACCESSION   KCPA01002524
VERSION     KCPA01002524.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 682)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 682)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..682
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="277949tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>682
                     /note="ultra-conserved element locus uce-131"
BASE COUNT          231 a          117 c          150 g          184 t
ORIGIN      
        1 aaaaaaatgg gggtggagag agttccaata attcaggtat gattaaaaag aggatattta
       61 ctggcttgta ggccttgggg agaaaaaaac aacacggcag cagagtttct atatacatcc
      121 ctagggaaaa gttcaagaaa taagaaaatg catataacca ttgttcatgt gcattatgca
      181 agctttaaaa aaaatagata gggctgagtt tcagagtatc aggaaaagtg tttgggctgc
      241 atttaagtga gaaggattag cttgcatgat gttgatttat aaatggcaac aaccaatccc
      301 ttatattctc tcctgcagcc atctctcctg cacagtaatt cccaatgttc ccttttgaaa
      361 gcccttgata ctcagttagc cccgaggtat aatgtttgat aatataacta ctgcttctgt
      421 cactgcgttt tgtacaaacg cattatatgt ggcccagaat ggtaaagatt tatgtatggg
      481 tatggaaaat aaaaatcagc attgattaaa agccccagat agaccatcca atcccgccca
      541 gagaacatca gttattttgc attttgacgt ggcgattgat aactcataaa tgcaagcagg
      601 aatgacaaat gcggatggaa actggctttg acaaaaacga taacagtatc agtctcgagg
      661 ggcgatggag gtataagcag ga
//
LOCUS       KCPA01002525             606 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 278061tic ultra-conserved element locus
            uce-726, sequence.
ACCESSION   KCPA01002525
VERSION     KCPA01002525.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 606)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 606)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="278061tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>606
                     /note="ultra-conserved element locus uce-726"
BASE COUNT          170 a          147 c          137 g          152 t
ORIGIN      
        1 tatcagtggc tttgcgttaa tcaatactga tgagtttgtc cttgacatac tgaccgtgtc
       61 atcgggctat tgtcatgtga tatcatgtca tttccccacc tggctcatga ccttgtcctt
      121 taaatgaccc aaagcttaag tagcaggagg cccctcccag ctgcctcagc aaggtcgaac
      181 gggtcagcgt gtcctcatct ataatccacc accatttgtc agcagggagg ctggaggagg
      241 caggcttgct acaaggggag aatgcccaat taggcagctg tcacacaaag cataggctgc
      301 aaaattatcc cctgtcaaaa gaaagagcag ctgcgggtgc caattacagc aacctttcaa
      361 ccctttaggt actggaaact acacagaagt aaatgaagta caattagtga taacaaatcg
      421 atgaattagg acagtaaatt agaaattact agcaggtgag cttaggtctc ccataatatt
      481 aagggcacag cacaccccag gcaagggcag gaatatacag atttccacat cagttttgtc
      541 ttatccgtgc cttccttgtc cctctgtcgt tttcttctca ccgagccaga tggtgcaggc
      601 aaagga
//
LOCUS       KCPA01002526             448 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 278165tic ultra-conserved element locus
            uce-4442, sequence.
ACCESSION   KCPA01002526
VERSION     KCPA01002526.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 448)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 448)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="278165tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>448
                     /note="ultra-conserved element locus uce-4442"
BASE COUNT          156 a           90 c           93 g          109 t
ORIGIN      
        1 aaaaaaaaag ccacttagca aaccacaaat ttcagagacc tagtcacatc tgtgttttat
       61 cagctttttc cggatagtat tacaccaaac aattgtctgc agatcggtag acagctgaga
      121 ctttaaagtg ctgaattact gagaaaatgc tagagataaa aaacagcaca tgtatcctat
      181 caatgtaatg aaaccaacct gctgctagcg ccatagtgcc ttagttctaa gtaccctgta
      241 gaggaacgga aggctttcat ttaactctta agaggaaagc cggggaaaga agagtaaagg
      301 tcatctaata cccgccttaa tcacaaaact gaaatgctct cagatatatg aagggaggaa
      361 tgcttggtgt tcaaaataaa acatcaactg cagacaacaa gagtgggcct gatcgtactg
      421 ggggtagcat ttcctgctgg aaattccc
//
LOCUS       KCPA01002527             402 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 278267tic ultra-conserved element locus
            uce-4547, sequence.
ACCESSION   KCPA01002527
VERSION     KCPA01002527.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 402)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 402)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="278267tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>402
                     /note="ultra-conserved element locus uce-4547"
BASE COUNT          105 a           74 c           84 g          139 t
ORIGIN      
        1 taattgtttt gatgcaccaa aagtaatatg caattatgtc tgcctctcag gtatgggagc
       61 ctacatctcc catctgctcc tggctctggg tgtttggtgc acatgtagca tggggcctct
      121 gaatgtataa tataacccca agtgaggctc agtggcagct gggataacat caattggtca
      181 tgctttgctg acattcattt taacttgaac tctagccgtc atggagatta ttaaatttat
      241 aatgatatat gtaagatcca ttttaatgac tccgcatgct tgggtgatct ctctcacttc
      301 tgtttgcaaa acagagtatt gcatttcatt tcctatagaa tttgaaaggt tattgatgag
      361 agctttgctt agacttatgc ttactgggaa aaatcagttt gt
//
LOCUS       KCPA01002528             704 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 278379tic ultra-conserved element locus
            uce-4853, sequence.
ACCESSION   KCPA01002528
VERSION     KCPA01002528.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 704)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 704)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..704
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="278379tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>704
                     /note="ultra-conserved element locus uce-4853"
BASE COUNT          233 a          134 c          133 g          204 t
ORIGIN      
        1 tagtaactct tgtcaattag ggagggtgta gtctactctc aattcattaa atgcaccaca
       61 attgtcagtt agtgacaggc tctggggagg ccgggactaa gtaaacataa gggataaatt
      121 atacaagaag accacagttt aaatgaggcc ccctttacat aacatgttta ttaaattctt
      181 aggtaaacta ctatcattga tgaaagtcca aacccttata ttcttaaaga gaaaaaatca
      241 gtcactctcc tttgacggtt tgaaaagatg tttgtaccac tcactgactg gctaatgaat
      301 aatcagattt cacagcttga gtgctagggt ggtaatttgg ttgcacgcca tgctccaaat
      361 ccatggaata gtgcttcatt aatgtgaaga cctgtataat caaacaatta gcagtctctc
      421 tgctgctaaa gcagcttttc atcagcatat atacttcgtt gtaagatgag actcaaatta
      481 ctggatctga cagcaactag tctttcacta aatcacagca gtagtaaagt agggtggaca
      541 gaacaaaccc atttctacat atgcaagagg ttcattctat ccatgccaca tgccatatat
      601 aactatcatc aagaaggtca tgacattgta ggtgaactga aattgcactt aaatgagtaa
      661 atcacagatt caagtgccat aaattggcag tgatatgttg ctac
//
LOCUS       KCPA01002529             307 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 278474tic ultra-conserved element locus
            uce-3317, sequence.
ACCESSION   KCPA01002529
VERSION     KCPA01002529.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 307)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 307)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="278474tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>307
                     /note="ultra-conserved element locus uce-3317"
BASE COUNT          119 a           61 c           48 g           79 t
ORIGIN      
        1 ccctctctct cttttgcaaa atataaaagc tgatctgata aatattaatt tgaaccatca
       61 taatgtattt gaaaattcca gctaaaatgt caccacatgg aacattaatg taatatttca
      121 aggccctgag agcaatactc atattgattg catttatttc actctaggga ggagaaataa
      181 ttcttcaatg tgggacacat ctggtagcca aagatgcaaa aggctaaggg tagaaatgca
      241 aagaaaatcc cccataatca aaccccccaa accaaaacag aagtacaagt gaacctgata
      301 aatgcaa
//
LOCUS       KCPA01002530             875 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 278584tic ultra-conserved element locus
            uce-3535, sequence.
ACCESSION   KCPA01002530
VERSION     KCPA01002530.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 875)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 875)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..875
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="278584tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>875
                     /note="ultra-conserved element locus uce-3535"
BASE COUNT          295 a          156 c          195 g          229 t
ORIGIN      
        1 taagaagtct aggagcaaat ttaaaagatt gtcctaaact tgtgataacc tggttgttct
       61 tgcctggtcc ctcacctgcc tgctccagag caacagcaca gtactttcta tcttcaaact
      121 gacacgaccc atcagagtga caggggagag aaagggctgt tatttgttcc ccagctggtg
      181 acagtaattt tgttcatgaa ctaggtactt cactgccaaa caatctggaa aagcatgata
      241 atgcctgact cactgtgcct tatagaaaaa ggcaaacatg catttgcatt ttctgaaatt
      301 ctatcttgtt ctgattttac aagaaattaa agcatttcaa atggtggaaa ttatagaaaa
      361 taaccgttgt tgttttgcac agcataccat tcacagctag cgtgaaagac cttccgtttc
      421 aagcctttgc cctttacctt gatgtggcca atgctttcta gtggaggttt tggaaggaga
      481 agaaatatca cagcatttct ttctttgttg agaatgaaga agtgatgagg aaggaggagt
      541 ggaaagaagt gaggaagggg gaggagaaaa gataaaagat aacaggtgtg agacatgaga
      601 cacgaaccgc agagattgaa gggtattaac agatgagcac agaaaacgga atttcgaatt
      661 tcattatgca attgctgctc atgctacagg ttaaagagag tgatgatgtg caatgaagca
      721 acagctctga aatacggcat catacttacc aactaggcat tacaagaaaa aaaggaaggg
      781 agagagaaag aaaagaattc tataacatta tccagatcca acaaccttat taatagcaac
      841 tgagatgctt cctaaacact gtctgaaatg cttgc
//
LOCUS       KCPA01002531             645 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 278696tic ultra-conserved element locus
            uce-4912, sequence.
ACCESSION   KCPA01002531
VERSION     KCPA01002531.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 645)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 645)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..645
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="278696tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>645
                     /note="ultra-conserved element locus uce-4912"
BASE COUNT          204 a          114 c          112 g          215 t
ORIGIN      
        1 aatgtcttaa aaagattgtg gtatgtttct tggactgaat atctatgtta tataaaggcc
       61 acttaagtgc tttccccctt ccgtttacct tttagtttag atcaattgtc atccatcaga
      121 acatgaaaag tcacttctga tatctttatc tgaagcaatc aataaaagaa agaagaaatc
      181 aatgaaattt tatcaagcat gaaatggtgt tttgggggat ttgctgaagt aatgtttcgg
      241 taaggaagga aataccattg actttattac agctgcctaa tgttttccac gaactgcaga
      301 aaataattca ttgtatctta gtgacctaca ataacagctg actgcttgca cttgatggaa
      361 atgtgatttg tgcctactaa aaattaacta tttaacttca tattctttcc tctgcacatt
      421 aatttccttt gcattctgtt tcgaactgct ttgtgagatg tgaactccag aaccaccaat
      481 tgctaggcaa tattcctcca tgaaagaaga aaaagagtca gtctgcatgc ttctgtgagc
      541 tgtaaaaccc atgctagatg aggccccttc attttaacag gcattttatc tcaatggttc
      601 aataatataa taaatataaa ggaacatttc tggcagtggt acatg
//
LOCUS       KCPA01002532             862 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 278809tic ultra-conserved element locus
            uce-1309, sequence.
ACCESSION   KCPA01002532
VERSION     KCPA01002532.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 862)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 862)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..862
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="278809tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>862
                     /note="ultra-conserved element locus uce-1309"
BASE COUNT          259 a          232 c          157 g          214 t
ORIGIN      
        1 cttcgtattt tacacctcaa cttcctggaa cagtgcaagg agggtacctc ccccccgtct
       61 gtggtatgga gagcctcttc ccctacggac cagcagtgcc tcagacaatt gctggcttgt
      121 cacctggcgc actgttgcag cagtaccaac agtatcagca gaacctccag gattcattac
      181 aaaagcaaca gaaacagcag caagaacagc agcagaaaca agttcaagca aagtcatcta
      241 aagcagagaa tgaccaacag caaaactcca gtgacacttc ggaaacaaaa gaagacagaa
      301 gttctgctac agaaagcaca aaagaagaac cccagttaga ttcaaaaagt gcagactttt
      361 cagacactta cattgttcca ttcgtcaagt atgagtttat atgcagaaag tgccagatga
      421 tgtttactga tgaagatgca gcagtaaatc atcaaaagtc cttctgttac ttcggtcagc
      481 ctttgattga cccacaagag acagtgcttc gtgtcccagt cagcaaatat cagtgtcttg
      541 cctgtgatgt ggctatcagt ggaaatgaag cacttagcca acacctccag tcaagcttgc
      601 acaaagagaa aacaatcaaa caagcaatga gaaatgccaa agagcatgtt agattattac
      661 ctcactcagt ctgctcccct aatcctaaca ccacatctac ctcgcagtct gcagcttctt
      721 ctaataacac ctatcctcat ctttcttgct tctccatgaa gtcctggcct aatattcttt
      781 tccaagcgtc tgccaggaaa gctgcttctt ccccttcttc tcctccttcc ctttccttgc
      841 cttcaacggt tacctcaagt tt
//
LOCUS       KCPA01002533             442 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 278908tic ultra-conserved element locus
            uce-2666, sequence.
ACCESSION   KCPA01002533
VERSION     KCPA01002533.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 442)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 442)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..442
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="278908tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>442
                     /note="ultra-conserved element locus uce-2666"
BASE COUNT          113 a           85 c          124 g          120 t
ORIGIN      
        1 agccttgtgc tcaagaccgg ggtgacctgg gaagcagaga gagttgctgc ttggaaatga
       61 cttttctgac agtatgttca tcatattttg agcttcctag atgaagtgac attgcttatc
      121 tcctcgaagg gaaaagcatt aaacctgttt cttctttgct cttcaggaga aaagctgccc
      181 atacattcct ccgaagaagc tcaaaatctg atgggccagt catcaggtaa aacgctagag
      241 ggaagtaagc aggctttggt tgaaactccg taaataggat tgtgctgctg ttgtgctctg
      301 agaggaatcg tggtgttcat ggagagacag caggttgtct tggtgggcag ggagagatct
      361 tctccttggt gcagcggaaa agtgcccgtc tgtgacgttt gtgtggaact gccatagaac
      421 cacagaatat cctgagttgg aa
//
LOCUS       KCPA01002534             572 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 279014tic ultra-conserved element locus
            uce-5693, sequence.
ACCESSION   KCPA01002534
VERSION     KCPA01002534.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 572)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 572)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..572
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="279014tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>572
                     /note="ultra-conserved element locus uce-5693"
BASE COUNT          182 a          113 c          138 g          139 t
ORIGIN      
        1 gctggagaat tcccaggcga gcttgataat ctgacagctt cccagagttt tacatgggaa
       61 aaacgacata cctgtgtgca gcagggagga gtgtccacgt catctgcact gctaaaaccc
      121 aggtttctgt tggacatcag gtcttcttcc ctctgcaaat taatgggaac caatggctga
      181 tccagcattg tgggcataaa tcatgtgaaa gaacagcgag aaatgagtac aaggcttttc
      241 tttctattta gtaatttatc aagggaagtg gcacattaat aaacagatct cccttgagat
      301 gtgggagtaa cagagataaa tatgactgtc aaatctggcc tgcttccttc tgttagagaa
      361 ggaggagact gtgggaatgc aaatgcagga aacaatatct atatctggaa agatgcatat
      421 tatttgtagg acagaacccc tgacaactca tctgagatgg ggccccattg cactcggtgc
      481 agtacgtaca gaataaaata caagccctgt ctaaaggagc tcatctaaat agatgacact
      541 gggaaatagg gacacagaag gaagcagcaa ct
//
LOCUS       KCPA01002535             525 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 279124tic ultra-conserved element locus
            uce-5671, sequence.
ACCESSION   KCPA01002535
VERSION     KCPA01002535.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 525)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 525)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="279124tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>525
                     /note="ultra-conserved element locus uce-5671"
BASE COUNT          160 a           91 c          106 g          168 t
ORIGIN      
        1 ttctctttct acctaatttt acgcaggcct gatacaatcc agcagtcaga aactgtagct
       61 gttttgtttg cagttaattc agctctctct cgacattttg ccagtgatgt gattataaat
      121 tttggttcca ggaactgagt gaggtgcagg taccaagaag atgttatgat gccagcgtgt
      181 gaggaagagt taaatctttt tgacaattca atggttccct ttgggtttgc acaaatggca
      241 cctgttgttg aagtcaatag agcttacaat ttaatttcat ctgcctgcaa acaatctcac
      301 tcattagggg gtgaaatgat gatagaattc actgaggcat gcagtttcac tttctacagg
      361 gcactacgta agtacagtca tcattttcag tgaagggagg cacaattatc ttggaaactg
      421 attgtaaagt agaagaaagg gaaaaacatc ataaaaattc agtctcacta catgctgatg
      481 ccaatttgca atctaattat tatatttaac atgatatgaa aattt
//
LOCUS       KCPA01002536             459 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 279232tic ultra-conserved element locus
            uce-4402, sequence.
ACCESSION   KCPA01002536
VERSION     KCPA01002536.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 459)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 459)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="279232tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>459
                     /note="ultra-conserved element locus uce-4402"
BASE COUNT          164 a           83 c           70 g          142 t
ORIGIN      
        1 ttactttcct agcacaaaat attaccctga agagtttatc tatttttgag cataacaaaa
       61 agttcacctt ttcagaatgt gctacacgaa gccttgcctg ccttttatat agtaaagtaa
      121 ttttatggta ttgtgtcaca atgaaggaca aagccaactg tttagattcc tgttgtggct
      181 ttgatcacta acaatgctgc atgaacagcc aacagaaggc tgacatttca taaaatatgc
      241 agtgataaaa actaatactg tagcatctgg gagcgatata taaaatgcag aaatacacct
      301 aataactgtg atcttaaatt acaagttact aaaagctaaa taagcagcat acctaaaaga
      361 aagattaaga caggattttt gtgcttctgc tcctaaaaac aaaaaattaa tccagatatg
      421 ctatctatta ttcttaacaa ttcctctggt tcccttgta
//
LOCUS       KCPA01002537             343 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 279335tic ultra-conserved element locus
            uce-7907, sequence.
ACCESSION   KCPA01002537
VERSION     KCPA01002537.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 343)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 343)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="279335tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>343
                     /note="ultra-conserved element locus uce-7907"
BASE COUNT           94 a           73 c           66 g          110 t
ORIGIN      
        1 cttttttttt ttttgcagtc ttagcataaa atggtcaaat gatgttccac cgcagaattc
       61 aatttcacag ttcagttggg tccttgatta cactgccaaa ttcagattaa tgtgcattta
      121 actaacatgg atcagggact cttggccagc agccagcagt aatagtagca accatgagct
      181 gagagtttgc tgctctgtcc atccctgtgc actgccactg aaattgattg attaaatgaa
      241 ctcattgcca taattatttg taattgtgct acatgatgag ccttgtcaaa ctaccctgag
      301 atgctccaca catcatcagg gtgaaaatgt tcttttccag agg
//
LOCUS       KCPA01002538             596 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 279446tic ultra-conserved element locus
            uce-1863, sequence.
ACCESSION   KCPA01002538
VERSION     KCPA01002538.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 596)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 596)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..596
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="279446tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>596
                     /note="ultra-conserved element locus uce-1863"
BASE COUNT          187 a          134 c          118 g          157 t
ORIGIN      
        1 aaatgaaatg agaattaggt ttccagtttc tgtgctttct tgctcctaag aaaacccagc
       61 cttaattgat gattccctgg agtcacagta tcccactatt tctgtttctg ctcaaaaggt
      121 tcagggcttc tataccagaa atggagcaca acactacctt tggggatttt aataaatgta
      181 gggaacactg ctagcaaaag agttgctgtc caaatagact gacataccca ggccaatgca
      241 gcctctaatg acagagtaag ataatgtcag gccccactca aaatcagcag gaagaggaag
      301 atcaatcttg gcagagtgaa ggaaaaatgc tggctttctt catgttagct catctcatac
      361 atatctatct tcagctgctg cccagtactg cggtgctctg cattaactac acagtggatc
      421 aataacaatt acaccttctc aaaaacatga cacatagcag gattgggttg acatttcact
      481 taggccaaca ttgatctctg attccagtcc taaattcaag tcaggcctgg gtctagctgg
      541 aataaacaca cagttaaaaa caaaaaagga aaccagctgc ttgtgccttg gctcag
//
LOCUS       KCPA01002539             399 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 279550tic ultra-conserved element locus
            uce-2505, sequence.
ACCESSION   KCPA01002539
VERSION     KCPA01002539.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 399)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 399)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="279550tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>399
                     /note="ultra-conserved element locus uce-2505"
BASE COUNT          158 a           57 c           82 g          102 t
ORIGIN      
        1 acctgtagaa atctcaggaa acatttgaaa tttcttcagc tggctgtata tcaagcatac
       61 agtgaaaaaa ggaaatagaa ggaaagtaga aaagaagggc aaaaggcgaa atggtttgtg
      121 tccatttaag aaaaaatcaa taatagcata aaattgattt agtgcttgtc ataaaacata
      181 agtaagtgct ggaaaataga gaaaattgag tctcaattta atctgcacaa aagccacact
      241 gtactgatga agtgatctga ggagagagct acataaaacc taaagacaga tacttaattg
      301 tcatagtaaa gactctcttt tctgcctgct ggagtcaagg ggtaggaccc attaatcatg
      361 tggataaggg gcattgaaat caaatctcaa ttaaaatct
//
LOCUS       KCPA01002540             387 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 279651tic ultra-conserved element locus
            uce-2897, sequence.
ACCESSION   KCPA01002540
VERSION     KCPA01002540.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 387)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 387)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="279651tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>387
                     /note="ultra-conserved element locus uce-2897"
BASE COUNT          139 a           62 c           67 g          119 t
ORIGIN      
        1 acaaagaatc ctaatcacag ccaaagatat cttgccttaa ataggttatc actaacaagt
       61 cacagctgga attactgcaa gcactgagtg aagactgtgg ggctaataaa aagaaatgat
      121 tcacgcctca tttatgttca cttatgtttt acattaatag aaaccaataa taggaaccag
      181 ttaccataaa agtcatggac cgtaaataac acaaatggca aataagtatc atctagtact
      241 tttcacagct ggacaggagg attgttatat ttgaaagtag ttaatggatt tttattggaa
      301 ctttactttt taaaggtgca gcacctagat ttggagatct ttttaaaggt cccagtaaat
      361 aaatgagcat aattttcata tttcttg
//
LOCUS       KCPA01002541             704 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 279753tic ultra-conserved element locus
            uce-7511, sequence.
ACCESSION   KCPA01002541
VERSION     KCPA01002541.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 704)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 704)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..704
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="279753tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>704
                     /note="ultra-conserved element locus uce-7511"
BASE COUNT          240 a          159 c          136 g          169 t
ORIGIN      
        1 agtacaaatt gaaaactgca gaacgatttc agaattactg gtgcctgatg tcactctttg
       61 aaattctcta gagctggaga cactggagac tcgtggtaag aaacacaacc caggagcaga
      121 gccaccgacg cctcctcttc tgtacaaatt tttctggtca agaggcaaca ttggaataaa
      181 ccagaaacat ttcagaacaa aaagctgcca ctccttttaa actaacctca cattctgggc
      241 aaaaccaatc cccctctggt tcggctgtca gtttcagaca cttagcatga taaacccgag
      301 gacagagctc acagcagagg acttggcctt cccgatgaca aacccagcaa tagaaatcat
      361 tccgtccatc ctgtggtaca acatcaacag ggtctgtggt gagtggctgc ttcatatagt
      421 aaaacggacc atgtcttagt tctgactgaa atgtaggcaa gaaaaacagg tttggtttca
      481 aaacaaattt gcaatatata agcaaacagc aatttacaga gtttgtttaa catttaagca
      541 cagtatctta gccattgcac attcataaag aagtttactg cttattcaga tgtcaaatga
      601 caatttgcac tcaagaccag aaataaatgt gccaaatgag ggcattgagt gcaagacatg
      661 caatccaaca agagccagca aacaccttca gcttcaagaa agaa
//
LOCUS       KCPA01002542             500 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 279855tic ultra-conserved element locus
            uce-242, sequence.
ACCESSION   KCPA01002542
VERSION     KCPA01002542.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 500)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 500)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..500
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="279855tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>500
                     /note="ultra-conserved element locus uce-242"
BASE COUNT          160 a           81 c           82 g          177 t
ORIGIN      
        1 agagagacaa cttatttaaa tcctgaatac agtcagacct catatgcatt gttaaaaaaa
       61 agccctaaag aattgcatat ggattagggg gatgaatatt ctattatttc agtctgttct
      121 gctgatcttc ttattgtgac tttgcgcttc agaaatctgc caggaatttg gctttgctgt
      181 actagacagt aattttaaat gtgtatcaag cacttgatag tgtatgattt gcgtgctgtt
      241 gcattcccat tccctaaatt ttccaccaat ttattacttt tttcatactg ttttaatatt
      301 tcaggatgat gaatatatac agcatcatta aaagtaaata aaaaatgcat gaaattaaaa
      361 aatggaatat tagatgtttc tttgctgtaa tccctaggtc caataggaat gaaatgtctc
      421 tgttctgtca agtaatccct aaacatgatt agggaccttg tagtttccac atagcccaca
      481 taatatttgt atcatataag
//
LOCUS       KCPA01002543             601 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 279959tic ultra-conserved element locus
            uce-6438, sequence.
ACCESSION   KCPA01002543
VERSION     KCPA01002543.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 601)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 601)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="279959tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>601
                     /note="ultra-conserved element locus uce-6438"
BASE COUNT          144 a          131 c          168 g          158 t
ORIGIN      
        1 gctgtgggct ggaaaaaacc ttccctgcaa aagacagtgg gaaatctgaa gcttcagcca
       61 tgtgcaggat aatgtgaatg atgattccca ttccaggacc gttgcttttc ctacacatca
      121 tctgaaagaa ttttatatgc ccaagggctg aaaggttggc aagggcagtt ggctaagtct
      181 gcacaaggtc agtgaggatg tccaataatt gtcctaacac tttacctgtt atggaacaat
      241 aatgagattt tttcattatt ttcgggtgag tgagcctggc agatgctgac agccagcaga
      301 tgtgtaaagt tcgaggtgat ttgtaaggga ccggctcatc tgacgcatgg taattgcatt
      361 gtgggacatt gtcactcagc cccgtgtcct gctccagcag gacgaggtaa aggtcagttc
      421 aaagagctgc cgaggcacag gggcagctca gggctcaaat taaacccctc acatccactt
      481 ctcacggcgt gccgggtggg cgccccaggt gtagatttag ggattttgga tctggagcgg
      541 gcttcctcct ctggtaatgt ggtagctcag tgcttgtctg tctacttttg ggggctcgga
      601 a
//
LOCUS       KCPA01002544             410 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 280063tic ultra-conserved element locus
            uce-12, sequence.
ACCESSION   KCPA01002544
VERSION     KCPA01002544.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 410)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 410)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="280063tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>410
                     /note="ultra-conserved element locus uce-12"
BASE COUNT          125 a           81 c           77 g          127 t
ORIGIN      
        1 ttctttggga aatggaggga aacactacag tcacatgtat caagttattt agaatcatgg
       61 ttcttttcac atacgatgga ggctgtcata aagacaggat gctgctgtgc agcaagaaaa
      121 gcacattagc tattaacctt cccccagccg atcaactttg ttttgcaatc tttcctcaga
      181 accattagaa taccctgaag aaataacttt ccaattaaaa aggatctcag agaacaaagc
      241 cattttatct ctgactcctg gtgttcttta ttccaataat ttaaattgga attgattttt
      301 caatttagct gttgacttgc tatggacaca cagctgaaaa ggccgaatgg aattgcatgg
      361 ctgaaatatt tgtctttgtg atgcactcct cataaattcg caggagcctg
//
LOCUS       KCPA01002545             782 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 280173tic ultra-conserved element locus
            uce-5476, sequence.
ACCESSION   KCPA01002545
VERSION     KCPA01002545.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 782)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 782)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..782
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="280173tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>782
                     /note="ultra-conserved element locus uce-5476"
BASE COUNT          296 a          126 c          157 g          203 t
ORIGIN      
        1 tttccatccc tcactcatct tagattagtt gtactctctg gtagacagat attttattgc
       61 tgcttagcaa taaattggaa aaacaagaga tttctcaaat tctctctttt ataatagtag
      121 acattggcac agcactaact tctaacagtt ccagaatgaa ttgtaaaata gcatggaaaa
      181 ctcaaaatat taattcttaa tctcttcccc tctcccacca tccccgaagt atttttactt
      241 tgaaaaattt aatggtttag cagaatttga aagcagaagg tttaaaaaag tgataaaggg
      301 ggtgcagaaa ttagcagagg tggcactacc tgaaagctca tcagaaaggg gagtgagaac
      361 aatatcaggc aagaagggtt tggaagtatg gatcagaaca ggagcacttt tagcactgcg
      421 tatataggcc gatggcagag cacattcacc aatggatcgg cttctcatgg ctttaaaaag
      481 gaaaagaaag aagtggggaa ggaaaaaaga agagtgacta taatgaaagg cttgtgtcac
      541 agaaaaagca gcaacagaga aaacaaagat aaaaaggaag aaaattcaaa aattaaaaca
      601 tttcagcacg gcagatagag ctgtaagaaa gaaatcagtg gacacataag acattctgag
      661 ttttcaattt ttatgtaaag cagcaacaat gcctttatta tgacgattac agagattttg
      721 catttgaaat caagaagcta attaacacgt tttcctactg catcaggggt tgaaaaatca
      781 aa
//
LOCUS       KCPA01002546             472 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 280281tic ultra-conserved element locus
            uce-1231, sequence.
ACCESSION   KCPA01002546
VERSION     KCPA01002546.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 472)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 472)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="280281tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>472
                     /note="ultra-conserved element locus uce-1231"
BASE COUNT          126 a           89 c          121 g          136 t
ORIGIN      
        1 gggggatgga agccagtctg gattgaggcc ccctggagct aaatctttcg atcaccagag
       61 aaaactgtca tttattaaat atttaacgta taggatggtg tttggtcgcc agtaatttct
      121 gttgaatctc ttcttccttt ggtagagccg ttccaataaa gaagatccag aacaactgcg
      181 gttaaagcag aaagcgaaag aggtaggact ttccagttac catgcttgcc tttgtgtgtt
      241 gagagaaggt tggcagccct gtcctggcaa ttaggtcagg gtttattttg ctgctgcata
      301 ccatttgcag aggccttggg gaaggacagg aactgccaca ggcaagggca gtgcttcaaa
      361 tgaggtcaat gaattatgag ctctcttttt ttaacacagt ttcagtcctg tctcgaaaca
      421 atcctttgta aactgcagca gtacacttgg taggaatata atgtgggatt ag
//
LOCUS       KCPA01002547             681 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 280393tic ultra-conserved element locus
            uce-3323, sequence.
ACCESSION   KCPA01002547
VERSION     KCPA01002547.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 681)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 681)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="280393tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>681
                     /note="ultra-conserved element locus uce-3323"
BASE COUNT          192 a          156 c          121 g          212 t
ORIGIN      
        1 aactaccata atccacgcta tctgggaaat acttgaatct ctctaggtgt aggctgttgt
       61 cctgaagcat ttaccttcca gacacttttc taaatttttt ttctcgacgt ctttttcttc
      121 tctcggtaaa acggctcttg gatttatttc tcacgcacct ctatcgcgcc tttgcctctg
      181 aaaagccacc actgggtaac tgagacctgc tataccaaac cactgctact ggagggactt
      241 ccttgaactt gaagaaaggc acatcaaaaa ccaccagtgt tactgccatg tcaattttga
      301 tgctaataat gtgcagatta tgacgaaaat tgccaatcat gttctctgat ggacctcctt
      361 tgaatgtgga attggaaaaa agttccccgc acagagacct gctgtcaagt gctaacaacc
      421 cgctaaggga agtcattaga agagacagat aagagacttg gtacataaaa cattgttctt
      481 ggtgcataga atgtatgtta tttaatgtta tctctcttac ctgaagtgat ttcgcacaag
      541 aaagccactt tcttatcatc tcaattgcca attttcattt tggtaacttg gacaccccgg
      601 gtagactttt ctctgttaag ttgatattcc accaatgtga agagcctcat taaatcaaac
      661 ccagatattt ccataatgct c
//
LOCUS       KCPA01002548             726 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 280501tic ultra-conserved element locus
            uce-2396, sequence.
ACCESSION   KCPA01002548
VERSION     KCPA01002548.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 726)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 726)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..726
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="280501tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>726
                     /note="ultra-conserved element locus uce-2396"
BASE COUNT          219 a          138 c          115 g          254 t
ORIGIN      
        1 gaaattcata cagtgttttg tgtttgctat aaatacacat ctcagctgta tttctatcct
       61 ttgtgtcaac attaaaattc ccttgttcta tgtttagctt gaataattac caaaccattt
      121 gcaattagaa ctctaggata tgacctcaca gtgatttatt ccttcatttc tttctgtatt
      181 taacgcattt cagatactga aaataccaaa tctttgtcct tttattttga tgtttatcag
      241 taatggaaac attccaaaac aatcagccaa atacctatgc tttgttcatt tattgccttc
      301 tctgaagata aattgactgt actcaactct cttcagcatt tttcttcacc tagatattat
      361 tgccttgtgc agccacccca aggtgactgt tatcacttaa ttaaatcctt gcacgctggg
      421 aagaaaaaac aacattgttc gttcataacc ccaaggaggt gtgttttttt tctttaagcc
      481 actaagcttt ttccttgttt tattaactta ttcctggcta cagcaaggca tactttgttg
      541 atgagcaaaa ggttgtatta gctttttatt ttctgagtaa acttatcttt tctctgggaa
      601 aactgtgggc attacaacaa agaagaaaaa tgggatctct ccaaaccctg caattctagt
      661 aaaggtctgt gtaaacatca agccagtaaa gagaaacagg ggagtagcag gaaggaaatg
      721 agaaaa
//
LOCUS       KCPA01002549             814 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 280610tic ultra-conserved element locus
            uce-3193, sequence.
ACCESSION   KCPA01002549
VERSION     KCPA01002549.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 814)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 814)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..814
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="280610tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>814
                     /note="ultra-conserved element locus uce-3193"
BASE COUNT          257 a          162 c          123 g          272 t
ORIGIN      
        1 atatagtgct ttaacattaa attcttgcct tcttcagggc atgaactgtc cttccttatt
       61 tgtacagtgt gtaagcagca cctacgtgat cctgactggg gtctcaacca actgtgcaaa
      121 tattagtact tgtaatatta taataggagg ccattatggt taatattttg tcatgccaag
      181 atatcccagg gggaaacatc aaagatgaat gtgcacaggt aaattgtctt gtccttttct
      241 agaatccaaa gaagaagacc acttcttgtc actcctaata tgaaagtaca ggcttagcct
      301 caaacatgta tttaaatcag aaacatacac tactatgaaa tgaaccatca ggccatccat
      361 gaatttgttt taacaatcca acaacatcac catttctcat tcatccactt agcttaattt
      421 tcctaccatc actttcattg ctgaggttgt ctctattaag ccattttttg tgcatcatta
      481 acttttaacc aggcatcgat agctttattg tttaaattgc gtatgacttt atttaacgtc
      541 agcatttctt ctacctcctg acatgaagtc acattttata actaattaaa ttgatccctg
      601 ggaagcagaa gccactaaac ggaattattc gtacccaagt gtcaatatat taaatcaaag
      661 ggctaatgag ttgggtcact gcttctttta tctgaaagct gctgcagaac agaatttgta
      721 ccaacctcta ctttctgctt taacaatcaa ttttatttga accaaaggta actaattaat
      781 aaaatttgat atagctgtaa ataatacatt taag
//
LOCUS       KCPA01002550             823 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 280723tic ultra-conserved element locus
            uce-4207, sequence.
ACCESSION   KCPA01002550
VERSION     KCPA01002550.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 823)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 823)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..823
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="280723tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>823
                     /note="ultra-conserved element locus uce-4207"
BASE COUNT          216 a          179 c          214 g          214 t
ORIGIN      
        1 agagctgtgt gcagtgcagg actatgtgga ttgctaccat cattaaccca ttaatattgc
       61 aggtattccc tgttgagtgc ttctggaaat tgtgctgaaa tgggagcacc caagtttact
      121 tttcacatct gtcgtatgct gcctcatctt acactgccaa acatcaatat cttctgcgga
      181 tcttagactg ttacacagct ctataaaagt ttagagaaga atgtgctgct gtgtagattt
      241 cagactctta agcacgttat gaataatact gtctttattt ctacagtggg agccaagaag
      301 aaaggtttgc tcccgggtgg aacagggaat atcctccttc ccttgatagt cttggtcaag
      361 aaagacactc tggcaacttc tctggcagaa aatcacttcc ttttgatatc caggcactct
      421 caggcctcct caatcctcag tttgccaaca gagaggaacc ttctttcagc tatggagcta
      481 gagatggacc acgtagtgac ttcagaggtg gggacgggca ccatgatttc aggggcaggg
      541 atttcccacc atctgacttc cagggcagag atgagtctca gatggatttc agaggtagag
      601 agccaccccc ttctgagtac aggggcaggg atatgtactc tggagatttc cgggagagag
      661 aagggccccc tatggacttc aggggtgggg atgttccatc aggggactac aggaacaggg
      721 acacgttccg tatgaactac agggataggg aagcacataa tatggattac aggggcaggg
      781 aggaacctcc atcagacttc aggggaagag gttcttacga ttt
//
LOCUS       KCPA01002551             586 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 280834tic ultra-conserved element locus
            uce-4711, sequence.
ACCESSION   KCPA01002551
VERSION     KCPA01002551.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 586)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 586)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..586
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="280834tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>586
                     /note="ultra-conserved element locus uce-4711"
BASE COUNT          187 a          107 c          132 g          160 t
ORIGIN      
        1 tgataacaat tacaggtaat ttttcatttc aattggaaga acaggtataa aaaaggaaag
       61 caagagaaac agagagcaag tgagatttcc caagtgcctt attccctccc aggtctacaa
      121 cctaacagga gtgtagagag ctcggtagtt tcttcttatt ccattaagtg agatctaatt
      181 gtgtctcttc tgtctgttgg cagatgcggt ttctacataa caacagccca gagacagagc
      241 tgcctgatta atgcctccag ctgtcatatg ccccattatc tgtgcatttg cataacttaa
      301 tggtttagga caggggagag aggatgctta atttaatgtt tagcaggccc ttgatagctg
      361 aataatttaa gaactgtcaa gggaggtcag tcctacagcg attcagcaag acagccgtga
      421 tttctgaata tcattaaaat ccttacttag gataatttga gagcatggaa aaacaacaac
      481 gcctgaaagg aggccctgct tttctgttaa ctattcctgc cctgaagatt aggagaaagt
      541 aatgtggaac acatcaatat ggcatggaaa gagagaaagg ggttaa
//
LOCUS       KCPA01002552             728 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 280945tic ultra-conserved element locus
            uce-5930, sequence.
ACCESSION   KCPA01002552
VERSION     KCPA01002552.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 728)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 728)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..728
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="280945tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>728
                     /note="ultra-conserved element locus uce-5930"
BASE COUNT          219 a          133 c          119 g          257 t
ORIGIN      
        1 aaaatttcca tttatcttcc tgattttcac atggacgttt gaaggaatgg cagtatttac
       61 cccacttgag aatagcatgg cttaagttac tcagtaccaa aagctatttt ttctaagagc
      121 tgtttctaat acctgctaaa attgatagca ttgttttcac attacttagg tgttaaaatt
      181 acatggtggt gttcctttaa aaaaaccaaa cctaatcctg ttaattcaaa gtgaataaca
      241 aacaggacta agactttttc ccaagttgtt acatttattc aacctgcttg tgttttgttc
      301 ttcatcataa ttatttccaa gtcaaatctg cgctgatttc cttgcggacc cacatacctc
      361 tgactaactt aaagaattga gctgggataa ttcacactat tccttggggg tcatgttctc
      421 tgtttttttt caaggacatt tttattacaa agctgatgaa atttgcatat taattcattt
      481 ctttcaattt tttaagatta aatgttgtca acatgtatca gtgcaaggct ctgacagtgc
      541 tgatgaaatg ggtcagtcaa gcttgaacat ttagagtaat gcagccatct gcaaccccca
      601 agccccttgt gtagtttagt gctaccattg caacttgatt aaaaaaaagt tttattcaat
      661 gcaggatatt aaaacattat cagtgaaatg atatgtgtta ctcctgccat ttgcagggaa
      721 agcatatt
//
LOCUS       KCPA01002553             679 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 281055tic ultra-conserved element locus
            uce-17, sequence.
ACCESSION   KCPA01002553
VERSION     KCPA01002553.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 679)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 679)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..679
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="281055tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>679
                     /note="ultra-conserved element locus uce-17"
BASE COUNT          207 a          134 c          118 g          220 t
ORIGIN      
        1 gcggcaggga gctctagcag atttcacatc taattgtgaa gtttcttgat ctgctcaaaa
       61 atgttcctaa actacagagt acctttgaat tctcattgtt ggatgaacat gacaaaactc
      121 tcggtatcat atcttactct cactcatctt gagcagatct tgttagtgca gattagatct
      181 tgttaaagat taattcttaa agcatcctca agctttcttt tccaacaaag gaaacatcaa
      241 ttataggctc acacataaac tttgccccta tctggaatac ttgctgccct ttataaatct
      301 tagatttctt ccccttgtgt gtgttcaaag gagagatttt attgcctcca ggggttgtta
      361 aactgattgc aataccacgt atttagagca gttcagtggg aattaagctg gttcaatgct
      421 gtcagaccta gaatatagct gtcaaacagc attacaagta aaacaccctt gataagaaat
      481 aatgaccaaa tgtcaatctg ttttttacca gcagcactac agacgtagcc ctgccaatga
      541 aaaatgcagt attttgcaca ttataacagc tatgcttttg tgatgctaca aaaggtgttt
      601 cagtctttca atgtagctta tttttagatg atagcattta atcacaaaaa tgtgtcttag
      661 acctaccgtg gattcaaag
//
LOCUS       KCPA01002554             590 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 281164tic ultra-conserved element locus
            uce-2701, sequence.
ACCESSION   KCPA01002554
VERSION     KCPA01002554.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 590)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 590)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..590
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="281164tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>590
                     /note="ultra-conserved element locus uce-2701"
BASE COUNT          123 a          147 c          167 g          153 t
ORIGIN      
        1 gaggaagttt ctgctggagc cgtctgaggg attggtgctg ccttggccct ttcacagtcc
       61 tgcaagcaga gggttctgct ggcaaagcat ttttgcaggt taattgtgtt ctgagccctt
      121 actccggcat tgcctccggg caggttggtg gtagacacag ccgcatcatc ttaaccaggc
      181 tctgctcttc acaggtccaa aatgcagtat caagtgtctc cttttgaaac tccaggggct
      241 ggaagtatca tgtgtttatg ttacaggaac tcctgaagcc tggagagtga tgatgtctct
      301 gaagtcgggg ctgctggctg aaagtacgtg ggccttagat accataaaca tcctgctcta
      361 tgatgacaac agcatcatga ccttcaacct cagccaggtg ggtgcagatg ctctctgggg
      421 cagctctttg aagtgctagc gaggtggcag agagcagctc ctgctgtacc tggagcgtgg
      481 ggtgtgggca gctgtgagcc tggcctgacc ctccctggga gggagataca tcctttgtcc
      541 cttttctccc atttattgcc agcacaagaa gcatgccagc actgcctaaa
//
LOCUS       KCPA01002555             623 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 281275tic ultra-conserved element locus
            uce-672, sequence.
ACCESSION   KCPA01002555
VERSION     KCPA01002555.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 623)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 623)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..623
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="281275tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>623
                     /note="ultra-conserved element locus uce-672"
BASE COUNT          153 a          132 c          116 g          222 t
ORIGIN      
        1 ataaatatat tgtgtgtgtt ttctgtatgt gtctctctgt tttttatata taaaacttgg
       61 tcagtctgtt aaactggatg tatttgtttt taataaagtt tgccctgcct ttgtcatata
      121 ttcctctacc acaggatagc tacagctctc agggtatttc tcagccccca accccaggca
      181 acctgccagt cccttcccca atgtccccaa gctctgctag catctcctca tttcatggag
      241 atgaaagtga tagcattagc agcccaggct ggccaaagac tccatcaagc cctgtaagtg
      301 gctctggtta ttttggtttt tttgtaatta attatatttt aatgcttgct tgtttgtttt
      361 gtaaattcct tttctttatt atttatccac taaacagttt tctttctttg taacactggg
      421 tacaaattct gctctcggac acatgactgt aagttccact gcctggcttc agtggggcct
      481 gagcatgctt atccaagggc aaaatttgtc ccaatagtac tttgaaataa gaaagagtaa
      541 aattgtgtgc atcatgcgag tgtgctgtct ggtaaaacag cagttgttgt gaagaaaaca
      601 tccttcctgt aatgcatcag ctt
//
LOCUS       KCPA01002556             731 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 281387tic ultra-conserved element locus
            uce-4528, sequence.
ACCESSION   KCPA01002556
VERSION     KCPA01002556.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 731)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 731)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..731
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="281387tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>731
                     /note="ultra-conserved element locus uce-4528"
BASE COUNT          208 a          158 c          172 g          193 t
ORIGIN      
        1 tgcccccaaa gatgcttggg gctgccacct agagctacct gtgctggagc aggagctgct
       61 gagcagcctt tgtgccaccc caagctggtt ttcaaccagt agggacagat attgagggat
      121 gagcttgggg ctgctcagtg gaaacattac tctgtgtggt accttcccga catcatgaac
      181 acctcagccc ctggggaaaa tctgggttct atcagctctt ataagcaagt gtttcgaaag
      241 gtttacagaa aagtaaagta aacagagctc tgagtaacaa aagagccccg tttatgcatt
      301 ctttgattca ctgtaaagga tggtgtaaac tgacttttta accaagcatt aggcaagatt
      361 tgggcccccg ccattatata ataaacagtg acatggctat attaaaatat ttacttaatg
      421 cactgaagtg acttatagta tgagtggcta ctcaatagga tggcctaagt gttaaggcgt
      481 caggtgccat cgcctgtata aatattctgt gtgcacttgt ttataggaaa accccatctg
      541 gatttggcta aaacagcaga caccctgctg accccagttt ttgctattgg aaaatataac
      601 acaagtgttc actcatctag aataacagcg gcggttaagt gccatctgac agacagaagg
      661 gtattggctt ttctcaatag acagcaggct gggtgctgtg aacagcagca gctccccaag
      721 atttacagca t
//
LOCUS       KCPA01002557             390 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 281486tic ultra-conserved element locus
            uce-6275, sequence.
ACCESSION   KCPA01002557
VERSION     KCPA01002557.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 390)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 390)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="281486tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>390
                     /note="ultra-conserved element locus uce-6275"
BASE COUNT          126 a           74 c           69 g          121 t
ORIGIN      
        1 aaataaatag aattgcttat aaaaaagtgt tcaaggaaaa ggttgtgctt gcctgaagca
       61 gaggccagat gctttgactt ccagctttct tccatcaaag ctgtgcagtt tcgaaattaa
      121 aatctgcagc aataatgaaa catattaaaa tgcaggcaaa gtcttgaggg cttataatat
      181 gctaaaaact ggcaatgcat gtttacatcc atatatcaac ttggatgtgc tgaaaagatt
      241 taaagtgtaa aatatgcaaa tatgtgtcat attgtcacac ttggtctccc taatggaact
      301 ccctttcatc tcaactctcc ttaatttcat gaatattgca tgcccctcac accttttact
      361 cctgctgttg ctaggctgag aagattatga
//
LOCUS       KCPA01002558             664 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 281598tic ultra-conserved element locus
            uce-308, sequence.
ACCESSION   KCPA01002558
VERSION     KCPA01002558.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 664)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 664)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..664
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="281598tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>664
                     /note="ultra-conserved element locus uce-308"
BASE COUNT          197 a          125 c          119 g          223 t
ORIGIN      
        1 tttgaataat ggcttatttt tttatgcaag taataaagaa atctgtcttt ttcagtgata
       61 gtatattctt ctagtgaaat agaattcaat gagcagtggc ctctattcca gaccatttat
      121 aattctgcag cagtgctggg tgcacattta ctaaagtgtg accttgggca ggacctgtag
      181 tcacagtgca aagtaaaatg aagtattgcc actgcttcct ttctcctctt tggaagttaa
      241 aaatactgtg catggctttt ctacagtttt gcacatttga gttagctcct tacacagcgg
      301 atacccttaa taaaatgaca acagtaattt agttttgtca tttgaactgg cactggctac
      361 atgcctcaaa aatacagtat tagagtagtt gaatgtgtgt cgggtctaat tcttttttcc
      421 attttccaga gagctgcttt tccattagct ttgggaaaac acactggcag attcatttaa
      481 aataagctca gctccaccct tcatataagt gacttagcct gtgcaataag aaattaagat
      541 caagggacgt tatttcatta gcctgtcgtt ttgttatttg cattacaaag acagcattac
      601 aaaacaacca tatctctaat ataactcatc tcagggagcc ttaagacact tactgtagca
      661 tatg
//
LOCUS       KCPA01002559             566 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 281702tic ultra-conserved element locus
            uce-6576, sequence.
ACCESSION   KCPA01002559
VERSION     KCPA01002559.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 566)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 566)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..566
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="281702tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>566
                     /note="ultra-conserved element locus uce-6576"
BASE COUNT          159 a          120 c          117 g          170 t
ORIGIN      
        1 ggcttccagg cccttcgccc actcctccca aagtttggga cacagacata ggagctcagg
       61 agctgcagga aggatttggc agggctgagc cacatgacct gctcatccag gggaccctgc
      121 gaaggggaga ctctgcactc attcgtggca tgtcaagcac agctcagttc tggtagcttc
      181 tcccaccttt gactaattgc tgacctgaca tctttctgat agtgaccttg tttcagctag
      241 taattcaaat atctttcagt gtcagaaata ataagtgcca cagtgagatg aacaagcaga
      301 gcttaagttg aacacagatt aatggggttt taatattcct aatttaatca ctcctttctg
      361 tctgaatgtg tgcaacatga tgtagcagct aattattttt ttaaccatga tgaggatctt
      421 tcctaatcat ttttatattt aacatgaatg aagggagggc agtgattaat gagggaataa
      481 atcttatgaa acagacacat gatcagttaa aaatacagct gtctgattat tttttttccc
      541 tttccctgta ctgcaaatac ttaacc
//
LOCUS       KCPA01002560             608 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 281806tic ultra-conserved element locus
            uce-2245, sequence.
ACCESSION   KCPA01002560
VERSION     KCPA01002560.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 608)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 608)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="281806tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>608
                     /note="ultra-conserved element locus uce-2245"
BASE COUNT          179 a          147 c           93 g          189 t
ORIGIN      
        1 cgtaagccac acaaatagcc atatttgtta acattcatgt gactcttcgt ctgagctgta
       61 tttccttgag tacaccacaa tgaagagttt cttttaatag ggatcaacca aaaacaactg
      121 tgagggactt ttctctctcc ctccctccct ctctctctca ctccctctct cactctctct
      181 aaacctttta cactgcggtt gaacaagcct ctggataaag actttatcca aaaaccccct
      241 ctttaaagtt atttcaaatt tctctgcaag gctttcagaa atctgtttgt ttgagggcag
      301 aattagatgt gaccggcgtt ttattgtgac ataaaaccat atttcttccc tggaagatta
      361 aaaaataaaa tcggttaata agaaaagctg tcagcaacag aaaatggctg acataatccg
      421 tttatcctcc gagcaataaa gatattggtc cttgggagtc tatcctctct ctcatgttat
      481 ttcgcccaaa acattatctt cccagcattc tgatggatta agaagtcata tgggagatag
      541 cagggaaatg acagatacaa aaaaaaataa tatcctttca tttcccctcc tccctgcact
      601 ctctctct
//
LOCUS       KCPA01002561             765 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 281909tic ultra-conserved element locus
            uce-4250, sequence.
ACCESSION   KCPA01002561
VERSION     KCPA01002561.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 765)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 765)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..765
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="281909tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>765
                     /note="ultra-conserved element locus uce-4250"
BASE COUNT          243 a          138 c          129 g          255 t
ORIGIN      
        1 tataggaaca gcagtttatt cacattcact tttcatcata catatacatt aaatattaat
       61 aacactctat gaatattcat ctctgtttaa tattcattta tacacagaag tttacagccg
      121 atccctttaa cttttggtgc caaaaccagt gttcaaaggg ttgtgctgcc attgtttctg
      181 caaaacgttt acatttatct gctgtaaaag aggaagagtg tcatgtttag tttcaaaatg
      241 ccacaaataa cagatttata gatttttcta aatacattat tttaccttga cagcattaat
      301 cattcatgct tccttctttc atttttctac ctgcaatgga ttattgaaac agaaaataac
      361 aacgggaaag gctacaagca gtatcaaaat gtcaagtttg tacttacagt tgtatgtgcg
      421 tagacagggt caagagcctc aattatttgt atatgtacac agtggtacta catgaaaggt
      481 tatgtcacct gcagctattt tcttgcagat ttaaatagga ctgatattca actccacagt
      541 cagccactga catggaacat agaattgtaa aatactatga actcttatgt caggacctaa
      601 aatatgaact gcgtgattgc aaggtgtagc tgtgggcaat cctatgtatt gcagtgtaag
      661 tcctttaaat tactttgtgt tatccctgac ctgttctttt catttaagca taagccggac
      721 caacatggaa gtactttcca gggagaagaa aaacccttga tattg
//
LOCUS       KCPA01002562             410 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 282016tic ultra-conserved element locus
            uce-2179, sequence.
ACCESSION   KCPA01002562
VERSION     KCPA01002562.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 410)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 410)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="282016tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>410
                     /note="ultra-conserved element locus uce-2179"
BASE COUNT          133 a           61 c           87 g          129 t
ORIGIN      
        1 tttttgtagg agccaaaact taagatcatg gactcttgat ttgctgactc tttcagtatg
       61 caagaagctg tacctaagga cttgagcttt cttaagttcg tgactctaaa tcaatttagg
      121 tggtgcctca aagcaaagag tcatgaaact ggagtgggtc cagagtgaat taatctgaaa
      181 ttaatttgat tttgaaaggc tccatctggc tgtgtttgga aaaggcattt agacagatat
      241 ataaacaaat gatcatctgt attctatatg ccagatgtgg tgtcaaaaaa atgaagaaat
      301 ggaaaaaagg aataagctga aggggatttt gctatactaa tgctcaactt gttgaaatca
      361 caattgcatc acactttgga cagtggtctt tccttatagt caaatttgta
//
LOCUS       KCPA01002563             702 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 282124tic ultra-conserved element locus
            uce-7157, sequence.
ACCESSION   KCPA01002563
VERSION     KCPA01002563.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 702)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 702)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="282124tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>702
                     /note="ultra-conserved element locus uce-7157"
BASE COUNT          236 a          103 c          123 g          240 t
ORIGIN      
        1 aaaaaaagcc aaagggtgaa aacaaatttt tttccccagg agtacttctg tctgttttac
       61 tacaactatt tcttaagggt attaggtgcc tattcacagt tagcaaataa aatagcattt
      121 ttgttttaat tcattgcttc tttaacaaat gctaactccc atctctgctt ctttaaatct
      181 caaatctcca cattcaagcc taagaagtat tgtaaaggct gtaaatcttg ttttaatgga
      241 atgtacattt agctatgagg agataattga cattatggag ggcctagatg ctgaattata
      301 taggttatct aatacaaagg ggactcatta ccgaagcact acaaacaagt agtaatatat
      361 gtatattgtt ctgagtggcg ttatagcaaa agtgttcagg tcttcaggga tttataaaac
      421 acaagaaaac agcagacatg cacttgtaaa tttgtctcat ttgtctctga agttaaaggt
      481 tattcccttg atctgaattt gtaataaaaa catgctagac taaggtttgt agagaatgtt
      541 tgaatatgta aattgtgtat aatgataggc aattataggg taaaaactgg accttatgaa
      601 tgttacagaa ttgcatggag catcaaagta ttttctttca gatgaaatat ttatctttta
      661 tgcatgttat aagcactttt tcaaaggtat tcagcaacct at
//
LOCUS       KCPA01002564             708 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 282236tic ultra-conserved element locus
            uce-2346, sequence.
ACCESSION   KCPA01002564
VERSION     KCPA01002564.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 708)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 708)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..708
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="282236tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>708
                     /note="ultra-conserved element locus uce-2346"
BASE COUNT          194 a          177 c          105 g          232 t
ORIGIN      
        1 aatattattg ctcattcata atgccttgaa tttactgtac ttaaaataga cacttgtacc
       61 aatggccctt ttattatcca aaaaatcaca tatacaccag ttctttctgc tagcaaaggg
      121 acgcaatttg atccaatgtg ggctgaaacc tgagtaggtc actgtacacc atgataaaat
      181 tccctaaccc ctgagccaaa tttccctgag ggggccctcc tacttctcct ttactttcca
      241 agctgacttt tccattccct ctctcgtctt ttcctcccct tcatctcttt catttcccct
      301 accttaaagc cttgatatct gatctgctgc tgatactcag gttacagttt ttacagctta
      361 ggctgtctat tgctgtatac attcctttct ttctgctctg ctgtgattac ttaccagagc
      421 ttattttaca ctggtccaga tgaaagcagt tcagatgaag ggaaacagtc aggctgtttg
      481 aacattacag atacaaacct acacaagggc acattgtgct cccgctgtca tttcactgca
      541 aacattttgc acactgtaac caatttgtta cattattgta ttctccaggt ttattaagaa
      601 caactagact cttaattcat cagtaaaaaa gggtaaatga tcgccacagg attttaacgt
      661 tctcaaaaat tcaaactacc cccctctttt agatgatagc agccaact
//
LOCUS       KCPA01002565             598 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 282342tic ultra-conserved element locus
            uce-2180, sequence.
ACCESSION   KCPA01002565
VERSION     KCPA01002565.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 598)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 598)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..598
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="282342tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>598
                     /note="ultra-conserved element locus uce-2180"
BASE COUNT          185 a          102 c          116 g          195 t
ORIGIN      
        1 agactggtca tcaaaatcta attagtctgt ttagtgagcc tagcatgttc tattttgttt
       61 gctaaatcat gaaattatac ctcagatatt cagcactcct gcagtatgcc ttttgaacac
      121 agtactgctg tagtttgggt aaccattctc actagacttt gcttaaatat tttatgtttt
      181 gaatgaacaa ctcatacagg gttgagccaa gggcttaatc actcttaata caataaagca
      241 gcactttaaa atattattaa cctcatctgt ctagatttgg aactaataga ccattgtgtg
      301 tgtattgtct ttatccctgc cagttatgta catatttatt aatccactct tccagaggaa
      361 aaatttctaa aggaaaacca acagtaacct tcaagtgagc gggcacaggt tagaagggca
      421 ctaattaaat gtcagacttg acagattaaa attatgaaat ttaaaatcac cgtggagctc
      481 tttgtcattg tcaaattagg agtcagtgtg atgaggagca tggaagtgaa tggtttaatg
      541 gattgaatgg gaatgtggct tagcagcagc cttttcttga attcagatca gcctgtag
//
LOCUS       KCPA01002566             634 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 282452tic ultra-conserved element locus
            uce-2119, sequence.
ACCESSION   KCPA01002566
VERSION     KCPA01002566.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 634)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 634)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="282452tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>634
                     /note="ultra-conserved element locus uce-2119"
BASE COUNT          156 a          144 c          151 g          183 t
ORIGIN      
        1 ttttcagaag ggataaaatc aatggcctga accagcggca tctttaaccc agttttgcct
       61 cagtcagagg tgccgcgccg ctgcaggagg agccctctgc tccccacgga aggggccccg
      121 ggcaccttcc caaaagcaca taactgcatc tcctgctgta cctgtaacaa tttaatcgtg
      181 tgagtcagcc cagtcaagca tccccagctc atgactggga gacatgaaat tcattgtcat
      241 tattgtccct gtcattttgg atcattatat cctgctgcag aattttcctc actccagtgc
      301 tttcttacct ccaggaagca gggattatgg ctgaggttgg ggtgggggca ggactgtgaa
      361 ctacatttac ctcaggggag ccacagatta aattggcttt gctttctgac ttgccggatt
      421 cgtctgtttg tacgctctgg gtttaaggtt ggaaatgatg aatattccag tgaattcggg
      481 gcctctcttt tttaatgctt gtataagcaa aggatggggt ttgtgtccct taagaagtga
      541 acggggaata attcttcaga tcatgttacc aaaaagattt aagattattc ccgaacaaaa
      601 tgacgttact tgttcattgt ggcacaaaca tctg
//
LOCUS       KCPA01002567             651 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 282561tic ultra-conserved element locus
            uce-2842, sequence.
ACCESSION   KCPA01002567
VERSION     KCPA01002567.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 651)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 651)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="282561tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>651
                     /note="ultra-conserved element locus uce-2842"
BASE COUNT          202 a          111 c          135 g          203 t
ORIGIN      
        1 aattcctaga agtctccctt gatgtacaaa ctgtggtttg aaaattaaca tcttgcttcc
       61 tgacagagac agtagatatg ctagctggta atagttggtt tctaatttgt ggtagaagaa
      121 agaaaaagaa aaaaaatttg ctgactttaa gtcttagcct atcagatgaa gacttgctgg
      181 tgcattagag gcctattcaa aacagggctt ttcttgcaac aggagcccct aacaattggt
      241 aatgaggaca gattctgaat tgtttgtgag cagctgctta gtaggtaaga gcttgtttgg
      301 attcaattga acagtgtttt tagaagcagt tactgacccc tgacccttcc tacagactgg
      361 gttgatggga ttagggaaag ctagcgttca gcttacactt ggctataaca agctggcaag
      421 agataacata ctttttaatt atcaagttac acctctgcca aagtttgtct gtgaatttac
      481 caaatgggtc aatgaactat aagaaatcaa gctaggccat gggataatag ttacataaga
      541 aaacagtctt ataattaata catttatata gtttttcccc ctttgcaaat atttcacatt
      601 ttcgcatggc tcttattgca gaggcatatg ttgcagccaa tgcagtttaa g
//
LOCUS       KCPA01002568             639 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 282668tic ultra-conserved element locus
            uce-5392, sequence.
ACCESSION   KCPA01002568
VERSION     KCPA01002568.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 639)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 639)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..639
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="282668tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>639
                     /note="ultra-conserved element locus uce-5392"
BASE COUNT          198 a          121 c          118 g          202 t
ORIGIN      
        1 gccacttctc tgctatagca cacataccct aaaccttaaa gagaaaataa aagctgttat
       61 ttccaaatga aaagatgttt caagtattgg gagacactga aagaaattct gcagtttgaa
      121 gatacttcaa cttaactact aattgcaggg gaccagtggg cgtaattttg gcactatatt
      181 agctttgcca ctccatgaat aatttgcata caaaatgctt tattttggca atctattaaa
      241 gagctataca gtatttgtgg cttatcgcat tcacgcagga agcaggatcc ttggccatct
      301 cgttaaattc tgttgatgca taacaattta aagcatggca caagctggta tgacatttaa
      361 agatgccttc acttaattat attacacaaa tattgggttg tttatccttg ggaataaagt
      421 ctttttgaag tcaaagttgg catgcgtata aaggagtaaa ttttaactga tccctcaagt
      481 gggcctccta gctgcaaatt ggggttcttg cattttttaa attatttgtg ataagaagca
      541 ttacactttg aatgcagcca ctggagtttg tttggtactc cccccttctt ctcccccact
      601 ggaaaataca gactttagca ataaatcggc acatgaaac
//
LOCUS       KCPA01002569             617 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 282777tic ultra-conserved element locus
            uce-4147, sequence.
ACCESSION   KCPA01002569
VERSION     KCPA01002569.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 617)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 617)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..617
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="282777tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>617
                     /note="ultra-conserved element locus uce-4147"
BASE COUNT          189 a          133 c          129 g          166 t
ORIGIN      
        1 taattaaaac tcaaggagaa aacctccatc gggaacatgt agacacccct gactctaatt
       61 tatgtgagtt taaaagtagt accaagattg gtttaattac ctgggaacaa tgtatatctc
      121 ctctattgca gatcagcttg ttagtgccac ttccagttga aattgataat acatccctca
      181 ctcaaaacat tgtctcccaa tcaccatggt tactgccagg tttttccaca aggaccaagc
      241 atattcatct gtcaagtatg ctaatggaga acggaccctg tcacacaaag gagcaggcta
      301 ttcaaacata cacttgccaa ataattgtac atgtcaaaag aatgatgctt gttatttgcc
      361 taatattatc ccccagaagt gggaaatagt tcagctctca atgcaaaatg gcttgccctt
      421 atcaaatagg caatttgctg ataatttaga ctattagaga tcttggggtg gggagacggt
      481 ggcaaatgta ttttataatt gcactggaag caaaaattaa gtgccccaga ggtgcagtaa
      541 cgaggagcat tgcaggagct gacggccaat gagaggggct gctcgcagcc tcccctctca
      601 cctctgtcag gtagctg
//
LOCUS       KCPA01002570             299 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 282885tic ultra-conserved element locus
            uce-6372, sequence.
ACCESSION   KCPA01002570
VERSION     KCPA01002570.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 299)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 299)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="282885tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>299
                     /note="ultra-conserved element locus uce-6372"
BASE COUNT           80 a           80 c           65 g           74 t
ORIGIN      
        1 ccgccgctgc ccccgtgagc tgccacctgt tgttaatcta cccccggcta atccatcctg
       61 gactgcgtca gcagttcaaa agggcactat tagtattttt tgccagcttc aattaacgtg
      121 agattttgga ggcccctctg atcacatttc atctgtcatg agtcaggaac aaaccagcca
      181 gattgcagtt gagaggagag aagagaagga gtttattgca aaccaaaaca acaacagtgt
      241 ttgtgggacc ttcccagtga tgccactcct ttcaaaaccg tgactagaaa ttccagccc
//
LOCUS       KCPA01002571             426 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 282989tic ultra-conserved element locus
            uce-3933, sequence.
ACCESSION   KCPA01002571
VERSION     KCPA01002571.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 426)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 426)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="282989tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>426
                     /note="ultra-conserved element locus uce-3933"
BASE COUNT          144 a           81 c           64 g          137 t
ORIGIN      
        1 cccacaaggg ccagaactac taaggaatta atttgttaca accactgttg ttctttctta
       61 atatgtgggc atattccgaa actcctattc acacaaatac aactgttcaa ttgatgcaac
      121 tcagtaattt ttattgcaac tggaagacaa tacatcacag aaactttatg gtaggttttg
      181 ggaaagtgtt atttacaata ataattgatg aaatagtttg tctttggcaa tatgattaca
      241 catcaagaaa atgtaaaatg caagtatgcc tctaaatcaa caatttcata tttcctaaag
      301 atcagctgat tgcacttgcc ttcggactgc tcatttaggt aaacacaaat acaacttaac
      361 atcactgttc attccccgtc acagttcata ttttaatatt gatgaaattg gcagtttcag
      421 acgcca
//
LOCUS       KCPA01002572             633 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 283100tic ultra-conserved element locus
            uce-7487, sequence.
ACCESSION   KCPA01002572
VERSION     KCPA01002572.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 633)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 633)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="283100tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>633
                     /note="ultra-conserved element locus uce-7487"
BASE COUNT          185 a          147 c          112 g          189 t
ORIGIN      
        1 tgagactcag caacaattag tacattttat tgtccttact gacctctcac ttagtaaaca
       61 atctttctta atgtggttca gtacactaat ctctcccagg ttttagcttt ctcagttccc
      121 ctgcaccatg gtttgacctg caggcaaatg aagccattca aatatttgct tatcttgtca
      181 tctgttctca tcagaccttg caattcctgt catgccccac atgtcagttt aaagcataac
      241 gtcattaata cctccagtgc actaatggat gcttcacaca tgaatgcatt aatgaaatgt
      301 gttattgttt tccctcacag gacattaaca atctcgctca cgctgagcct ctgaagccct
      361 gcagtgctgc tgaaaaccac tagctatcaa atgaaccctc agttacgcct cagtaacttt
      421 aagttcaagt ttatcactga agtgtcacta atgtgaggag aagatacaag cctccaaggt
      481 cttttgggcc cagcttcaat taccttaaag agtaacagga ggcaatagct gcaagggaaa
      541 aatacaccat catataaatg aaatgctgtc aagacaaaac aggaaagatc tgagtgtcaa
      601 tgtggtaact tgtttctagc ctttgtctgt gga
//
LOCUS       KCPA01002573             618 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 283211tic ultra-conserved element locus
            uce-6932, sequence.
ACCESSION   KCPA01002573
VERSION     KCPA01002573.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 618)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 618)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..618
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="283211tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>618
                     /note="ultra-conserved element locus uce-6932"
BASE COUNT          167 a          196 c          124 g          131 t
ORIGIN      
        1 aaggtacaga ggccctcctc ctgcctacct cagcaacatg aactccatta tcctactaaa
       61 gggcctgtct ctgggagcca tccccatcca agtcctgaga gcacacctga aacaaacagc
      121 tgccctctga caaagtctgt cctcacccca gttagcccct ctgctctctg gcccaaggac
      181 agagaaaaga agtaatagca ctggtgccag aagtcagcag gaagcaagct cccccctctt
      241 tctccttctc tctctttctc tttcatcctt caggacacaa acctgcaagt gcgctcgttt
      301 aactcaagct gcctcgactt gcaacgtgag tctgtgaatt tgcaggaaca tttacaggtc
      361 tggggatctt gtacaaacaa gtgctttctc ctctctgagc aaggctcaca gtgactgcaa
      421 aaaggcaaaa ggaaagatgt ctaagctaca gcgcttcagc agaaagaaaa tacacatgca
      481 acaccctgaa catcaaagca atccccttgc cccctcccac agcccccatg ctgcccactg
      541 gagtgccgtg ggctgatgga ttttccagca gcacctcgac agccccagga cagcaacccc
      601 ttgcattagc atagagaa
//
LOCUS       KCPA01002574             435 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 283315tic ultra-conserved element locus
            uce-3551, sequence.
ACCESSION   KCPA01002574
VERSION     KCPA01002574.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 435)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 435)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="283315tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>435
                     /note="ultra-conserved element locus uce-3551"
BASE COUNT          125 a           75 c           95 g          140 t
ORIGIN      
        1 gctccctgct ggtgacagga acagttgtgc cttcgcagca ggggtctggt ccctgttggc
       61 caagcagggc ctggtggagc agtttgaggc tgtttgactg tccctgtcat cataaggttt
      121 acggatggtt aatttattct ttatagcaca gtcattgatg gctgttaaat cacaaatgag
      181 agccaataaa gggtgaattg cagctgaaat tacactgttt atatgacagc agagtgctgg
      241 ctaaaagatt catatgccgc tgatgaagta cgttataaat tttaattacc atagtttgta
      301 caaatgacat gtttgaaatg ctattgagta atgtgaccct gataatgaaa ctataaaata
      361 aatcattaac tttctgaatg agctttttta tttccatgct acatgaagta aactttccaa
      421 tttattccat tgcag
//
LOCUS       KCPA01002575             746 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 283419tic ultra-conserved element locus
            uce-1183, sequence.
ACCESSION   KCPA01002575
VERSION     KCPA01002575.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 746)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 746)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..746
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="283419tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>746
                     /note="ultra-conserved element locus uce-1183"
BASE COUNT          239 a          188 c          142 g          177 t
ORIGIN      
        1 atattttcta acacataaaa gggagaagtc atgttattca cataaagtaa gcccagtgta
       61 gaagctgcca cggtttacac caggaatgca cctcctggca gcaagctgag agtaaccaac
      121 ccctccaaaa taaagacaag gacaccctcc ccaccaaaag aaagaagaag tgccacaaac
      181 tggggaaaac aaacagcgtt caagcaggaa tattacgaat aaagcaaacg cagcaatgcc
      241 acaaaagtct aaacacttgt taaaccgact gattttagaa catttcagcc atacaacatt
      301 attcaactac tcatcactgt gagaacaggc aatcaggaaa gctaatttct taattagctc
      361 tgctccggcg gtaatgattg cagatcgtgt caactaaaat ctgtttggat ttctgtaaat
      421 tggagtccga caagcctgca gttccgtcgc caacctgata actctcaccc ccctgtcttt
      481 tgtttttcct tccagccttt ttcctgtcgc catctcggta tttaatctga caccgccagg
      541 cagcgagaag ggtttactct tccccttgcc gagaaagagc acgagagagg aggaaaagca
      601 aaacatttac gtggggacag gagggctggc tgcacaggaa acctggacca aacctaaact
      661 cctgacaaaa gcctttaatc tttctcacat tcctcaaggc attctcctcc tgtaatagga
      721 catattcctt tcaagtaaat cctgat
//
LOCUS       KCPA01002576             512 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 283530tic ultra-conserved element locus
            uce-5409, sequence.
ACCESSION   KCPA01002576
VERSION     KCPA01002576.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 512)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 512)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="283530tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>512
                     /note="ultra-conserved element locus uce-5409"
BASE COUNT          162 a           95 c          106 g          149 t
ORIGIN      
        1 gcctgaatga cctatggaac acagtgagtc agtcactcct gttgcatgct tgcaatgaca
       61 aagcacagtt ccactaaata taatggtttc ccatagccaa gcatgctcca agagtaattt
      121 gctaccttgt caaagccctt tcaccaggtt taaaactgag aagagtaaag tggtcagaga
      181 ataattaaaa atattcttaa aatcttgcaa gaagtgtgtg gatataataa catttttacc
      241 attgatatct aattattttg cttgcagagt gcctgtaaag atgacgacga aagcaccaac
      301 attcacacag ccattacaaa gtgttgtggc actggagggt agtgccgcaa cctttgaggc
      361 tcatattagt ggtaaggttt tgattcattc ttccaagatt cttttcgaat gcttatgcta
      421 agatgatggc atttttcata gatctggcac aaatgggtaa agatgagtgc tgaaacagca
      481 ccttcaaagg gaacttcaca tttgagtgat ga
//
LOCUS       KCPA01002577             358 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 283632tic ultra-conserved element locus
            uce-7251, sequence.
ACCESSION   KCPA01002577
VERSION     KCPA01002577.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 358)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 358)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="283632tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>358
                     /note="ultra-conserved element locus uce-7251"
BASE COUNT          101 a           73 c           57 g          127 t
ORIGIN      
        1 cattttgcca gcagttgcat caattgtcat ttaactgccc taaataatgt gttctcttcc
       61 ctgttgtatt aaactatttc tatcaaggct aatgattttc tgatttccac atgccagtga
      121 gcttggcagt aacaaatgat gcctctcttt tgcatgttgc aagtagctta aattatattt
      181 tacataccca tttaaaggat cattagttaa gttaatatcc ttgctattca ggaggatcaa
      241 gcactttagt aagggatagt ctcactgtac atcctctgct agaactgagc acatttttag
      301 cagtcttggc ttgttaaact cacactcact acatatggat aagaccttag atacctat
//
LOCUS       KCPA01002578             523 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 283740tic ultra-conserved element locus
            uce-4232, sequence.
ACCESSION   KCPA01002578
VERSION     KCPA01002578.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 523)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 523)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="283740tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>523
                     /note="ultra-conserved element locus uce-4232"
BASE COUNT          154 a          102 c           94 g          173 t
ORIGIN      
        1 tacgcaggtt ttggatcagc accggagaag ccggtttagt gtgaaatttc ccccttccaa
       61 ggctgcatgt tttaatttaa gtaggtttga gcaaagcctg cagtgctatg tctctttttg
      121 cctggacctc atccttaaaa gagacatgaa aacaccagct cttgatctgc tcctttgagc
      181 tgcacccttt tagtggacat gaagaaaata agaccagaca taaatgatta atgcagaatc
      241 ttggaagaaa atattgcagg gtgccttgct gtttgattac aagccttgga attagtcaac
      301 atttccataa ttctaaacca atatacacct gttttcccac tgtgatgtga aggcacaact
      361 taatttaaca gaaaccccgc tgtgctaaat ctctcattaa ataccaagct agttctgtaa
      421 tttaaagttg cagcactact attttaactg aattgtcttt gtattataaa attaataaga
      481 agttaatgat gcacttttct gtattctctc agggtttttt ttt
//
LOCUS       KCPA01002579             537 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 283852tic ultra-conserved element locus
            uce-2531, sequence.
ACCESSION   KCPA01002579
VERSION     KCPA01002579.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 537)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 537)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="283852tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>537
                     /note="ultra-conserved element locus uce-2531"
BASE COUNT          164 a           85 c          102 g          186 t
ORIGIN      
        1 accagcaaac cttttttaat tgcacattct atttgcccct gttccatgcg ttcaacctgc
       61 agagaagaaa gacatttaaa gattaccaag gcaagtttgt aatgaagcgg atgcctcttt
      121 gtctgtcctt gcgccaacag cagcagaagg gatactaatt agagggtgaa ttattagctt
      181 cccatggtgc actgcagggg cattaaaaat gagtgtagtt tgttgctttc tttttagatg
      241 gttagtactg gtttaatata ttcttgtttc taggtgagca gcaggggaca gtttttatta
      301 ttataattgt tgcataatta ctggcctaag gttgcctatt gttaaataaa aatgctgaga
      361 tactaatgtt ttattgaaca gtacaagtag ataaaattgt aatatatttt cctgaacaat
      421 ataagcttgt tatctggtga caactctaag ttgtcttgtg gacaaaactg atttcttgta
      481 aaaactaagt attaaaacct gaaatgcatt caacaagttt cattttcact tattcaa
//
LOCUS       KCPA01002580             584 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 283956tic ultra-conserved element locus
            uce-902, sequence.
ACCESSION   KCPA01002580
VERSION     KCPA01002580.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 584)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 584)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..584
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="283956tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>584
                     /note="ultra-conserved element locus uce-902"
BASE COUNT          169 a          128 c          106 g          181 t
ORIGIN      
        1 aacttccgat gagtttctct cctcctcaga attgggagca ggaaaagaac tttataaaat
       61 tctccacaac cagtcgagcg gaacctattt tctctcacaa tgcaattaac ggcaccaaca
      121 tttacaaaat atgattacaa gcactttggt taagtagagg aaagtatatt agatagcagc
      181 gaggggttga tcttaatgtg cattttttcg agagacttgc attttctttg tgcaaataaa
      241 gaggccctaa attctccata ggcactaaaa tcaatgcagt ggaaccatga taacaaacac
      301 aggctccact ttttgctaca tcccccaatt aattaagcct ttcacgggca tgtaattagg
      361 aacattagca agtcataaaa ttgccgtgag tctctaaatt atgtgctggc cctcagcaat
      421 ttgtttttaa ttccttttga agacaatggc actgcggggt cccatagatc ttcatagcag
      481 cctactgttt acttctttat ggctctatga agatctaact gttttctact gctcccagat
      541 gcacccgcac tattttcttg tgcgttttca ttacctgagt cgga
//
LOCUS       KCPA01002581             480 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 284066tic ultra-conserved element locus
            uce-2486, sequence.
ACCESSION   KCPA01002581
VERSION     KCPA01002581.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 480)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 480)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="284066tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>480
                     /note="ultra-conserved element locus uce-2486"
BASE COUNT          182 a           74 c           83 g          141 t
ORIGIN      
        1 aggatgaagc tgttgccaac attatatttg tttgaataat ttaatgaagc taagagaaag
       61 aagcataatc tgaaaattaa taaatgactt caaagtaagt ctccaaatgt ctggatttag
      121 actaatttat aaagcaaaca agggaaaagt tttaaaaatc caggaaacat aaactgaagc
      181 tgaggccttt cacaagatca agacaagata gatgacaacc tgtaacggtg tatcttaggg
      241 ttccatgact tcagtttgga attcggatgc ttgtatttgc agtaaattaa acaaagctga
      301 acccatctag agaaaaaaca cagcaaatca aattaccttc tttttgccta agtattgtaa
      361 atgatggagc ctctttctgt tgcatcatgc agatttcaaa ttatgtaaca tctaaatcat
      421 cataaattgt tacagttgaa aactcaataa tatgagcaaa gatcaaatcg ctgtgctgtt
//
LOCUS       KCPA01002582             550 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 284174tic ultra-conserved element locus
            uce-6896, sequence.
ACCESSION   KCPA01002582
VERSION     KCPA01002582.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 550)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 550)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="284174tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>550
                     /note="ultra-conserved element locus uce-6896"
BASE COUNT          157 a          106 c           88 g          199 t
ORIGIN      
        1 tgttagtatt tcactgttct taagcaaagt tgttccgaaa atctgaaagt ctaattttat
       61 gaggcctttc tttctctgcc ataaggacat atgacataga atgaagaaag ctttaagtgt
      121 tactttcaca tactctttct ccagattgct atatgaagct gtacataata taaacacata
      181 ttcttgtctc tagttagtca cattatagtt aatgaccata tggtcattat ggcataagat
      241 ctactgtctg ttgtatttat attcctcaag catattgttc cttcaacttc acagtgtgtt
      301 aaactatttc aaagggaatc ctttccctct tgtttctggt tgtcctatca agtgtaacct
      361 tggaccctta tagagcaatt agaccagcct ctatcccctc ctttgtaatg aggtttcttg
      421 catttctgag tctataaccc tttagtcttc cctaatggga catcattatt ctgaaagaaa
      481 caatgtaaat gtaaatgaat attctcatta acgagtcaca gagaaacctt tagtggtagc
      541 gctgtggtaa
//
LOCUS       KCPA01002583             664 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 284283tic ultra-conserved element locus
            uce-3072, sequence.
ACCESSION   KCPA01002583
VERSION     KCPA01002583.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 664)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 664)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..664
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="284283tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>664
                     /note="ultra-conserved element locus uce-3072"
BASE COUNT          235 a          127 c          123 g          179 t
ORIGIN      
        1 tggcacacaa cccatttaag tcaaacagct atcatgtaaa agtgaagatg agcaacaaag
       61 cacatccaag ggaagcaagt taagatctag gccctgaggt ttgaaggggc taaagaaatc
      121 gagccaaaga aattctaaaa aggcaccttt ttaggttaaa aaaataagat tagaaaccgg
      181 cttgtatgag cccaactgtg attaaaaaaa taaacctttt atagtttctt tttgttcttt
      241 gacttttcct tgcagagaaa gaggctatct tcacttaatc agagcaaaga aagagtggct
      301 gaggcagaag cagcatcatg tgggtgaagg tcaggccaat tttcacccat gtgatgctgc
      361 tttatcactc atggaacaaa gattaaggcc tttctttctt tatccttttg tgctttcccc
      421 cattacttta acagatctga acaaatccca ggcagttcat ccaaaagttc cttttagcta
      481 catttagttc agatcctcta aattccacat aagacttcat gctataccaa catgaagagg
      541 atataaaatc cacatgtgta gggagaaaaa tgttataaaa aaacacagaa atcattgcag
      601 aatatgatga catcaaaggc cttttcagct gcaagaaact aggcacatct aggaatcaga
      661 atta
//
LOCUS       KCPA01002584             493 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 284391tic ultra-conserved element locus
            uce-991, sequence.
ACCESSION   KCPA01002584
VERSION     KCPA01002584.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 493)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 493)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="284391tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>493
                     /note="ultra-conserved element locus uce-991"
BASE COUNT          156 a           93 c           90 g          154 t
ORIGIN      
        1 tttgtaggcc ttgttttaat cagagattga gaaacactcc tgactgatag tcttcaggac
       61 ccgatccaga cagaaaataa catcctcaat ttggcctctg aaggtgggtt gtgcaaatct
      121 ttgtgatgta ttgcagtatt tgctgagtgc aagcacacgt ggtgtggttc ctatttctgt
      181 cggcaaataa aaatttttca ctcagcagga ataatcagag ctaactcgag aggagaaata
      241 acaaaagctc aacagccctt agcaactcag catggcatag agggatttaa gactttagca
      301 ttttatctct atcagtatga aaatgtatga ggaaatctga acgcaaataa acacatttaa
      361 cacattataa accacccatt ctaacaatga ctcttgggtt ttttcctttt ctagcctccc
      421 tctcctgaaa taataaagat ggttcattaa tttggattta actaaaatca atttgttttg
      481 acagagttac ttt
//
LOCUS       KCPA01002585             845 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 284503tic ultra-conserved element locus
            uce-725, sequence.
ACCESSION   KCPA01002585
VERSION     KCPA01002585.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 845)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 845)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..845
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="284503tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>845
                     /note="ultra-conserved element locus uce-725"
BASE COUNT          181 a          221 c          182 g          261 t
ORIGIN      
        1 cgcttctgct ctttcctcgc cgaaaccagc tgctggaaac tctgctgctg ctgttgcggc
       61 agcttttgct tgcgtttgtt ttctctgtaa ctttctcggg gactgacgga ctgtggagct
      121 atttctcttt cattttcatt gccccttaat gccacactgg gggaatggct catacctcga
      181 attatattct caacccgggc gcgtttagct ctcaggtgct cgtcgcataa ccgatccaca
      241 tcaaactggc tcatagttgg cctgccaaaa ggggaaagac actcttgggg gctgtctctt
      301 gaagagttgc tgcatacatc ctcctgatgt acttctgagc ctgtactaga gagaccgctg
      361 gcttggaaac tgggctccgt gccaccattt ttgttcatgt tatttttcaa cagctgggaa
      421 attatggttg ctcctggaaa aggcatcatg gcatcttcat atgagttcgc cctcttcagc
      481 agcttgcgga gtacatttga cttttcccca tctgcatgct gcactactga atactcgaca
      541 tcctgctctg aaccttgggg attcatggca ctaaaaaacg ttgctcttgc ctttgcaaaa
      601 aatgcagatg ctgtccctac cgtccttttc actccaatgt caactcttct tctcttggtt
      661 tgcctgctta agagggctgt gctgtcatgg tcaggcatca ctggactgtt attgtgccat
      721 cttcaaaagc ttgtcagctg ggctcagctc aagaatcctg ggaccctggc caacagaaca
      781 aaaggactga tgaatcattt tctttaaatt tctccaaatt tcctgacctc aatcctgaat
      841 aaaat
//
LOCUS       KCPA01002586             654 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 284611tic ultra-conserved element locus
            uce-7348, sequence.
ACCESSION   KCPA01002586
VERSION     KCPA01002586.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 654)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 654)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..654
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="284611tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>654
                     /note="ultra-conserved element locus uce-7348"
BASE COUNT          158 a          136 c          122 g          238 t
ORIGIN      
        1 gatgtgcact gctgggctgg gagaggtgaa attcagcagg taaagccagg accttctttc
       61 atttccactg acaatgggtc caagcccagg ctctccctga tgaatgacca tacctatgtt
      121 agtagactca gtttattctc cctgatggaa actgacactt ctcccattgt cttgctcttt
      181 tattggcttt gttgtctgac ctcagttctg acttttatta ctttttcttt agtacattca
      241 actggaccgt cccattcctg agctggctgg caattgttgc cctctctctg ttcaccgtca
      301 tcctttattt cattccactg agatacattg tccttgtctg gggtaagtaa agctatttta
      361 aactgtcttt ttaatggatg acttacactg ttttcggtat ttatggtcat gaagctgccc
      421 tatgatgaaa ttaggcatgt tagttaaaaa atatttaggc ccacctgcaa aatgcatttt
      481 tcttggctgg cattctagac ttaatcatac tataaacatg tagccatgag gattcttcat
      541 atatcaaagt gtagctttgt ctagatttat tttcaccact taagcagagg catttcaatc
      601 tatatagtgc atttaggaca atattttttt tactgcagta tcttgtgaaa gtgt
//
LOCUS       KCPA01002587             672 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 284722tic ultra-conserved element locus
            uce-5661, sequence.
ACCESSION   KCPA01002587
VERSION     KCPA01002587.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 672)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 672)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="284722tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>672
                     /note="ultra-conserved element locus uce-5661"
BASE COUNT          210 a          147 c          117 g          198 t
ORIGIN      
        1 attcatctcc tgaaactaaa agccaagctc ataaagcaca aacccacaca agctaaaacc
       61 aatcagtagc ttccctgagt ccctgcaaag ccaagccatt cagtggcatg ctgctctgcc
      121 aataatagta acaagtaaca ctacactcgg gctgtaattt ttcatatcca ctgtgctgtt
      181 gtcatatgat ttactgtgct agcactgaga gccattgccc aagccctgtc tctgcactcc
      241 tcctgattta cttaaatctt tttactttta tcagccacag ggaatgggga cactttaaca
      301 actgacaatt tgaacagaaa atacagagaa aagctgtgta aagcaagtgg ctgagattat
      361 agctgttgac ttctaatatt atttgacaga tgagactgct gcaattatcc tctgctcatg
      421 ggttccatta cgggaacaag aagcacacaa aataagggca atttcccaaa caatatatag
      481 gtccacttaa ctttgtcaag agccatttct gcaagtgaag tcctccctgg ttaaagatac
      541 aaggataatg tgttggcaac ttcacatgag tatttagtgc attccacatt aactgcattt
      601 tcagttcttt tcctgctctg tttgaaccaa ataggatatt atttttaaag gtatttgttt
      661 gaagaataac at
//
LOCUS       KCPA01002588             418 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 284823tic ultra-conserved element locus
            uce-873, sequence.
ACCESSION   KCPA01002588
VERSION     KCPA01002588.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 418)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 418)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="284823tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>418
                     /note="ultra-conserved element locus uce-873"
BASE COUNT          140 a           66 c           79 g          133 t
ORIGIN      
        1 tgctttgttt gacaggaaga gccacctttt ctaagcgaga aatacaccac aatctggaaa
       61 tcctattaat aacattagag tcctgaactt taatgtatta atgaatggac gtgcacccat
      121 gctgtaatca tggatttcag cattgccttt gatgcttcat tggtcacaaa gctcttacaa
      181 aatgtttgaa gtgtctggct gtgtaataat gatttataat tctcttgaac caaagcaaaa
      241 tttgctagta aaaatcattt ttgaaataaa aaataaattg tgactggagg gtctgggttt
      301 gtttcaaaaa gagatcaccc acaagcagca aattatttaa aaagccactg gttctagtgt
      361 tttgagatag ggagcgtaca actcagaatt tcaaagtagt gttaattaag atcagttt
//
LOCUS       KCPA01002589             765 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 284931tic ultra-conserved element locus
            uce-6121, sequence.
ACCESSION   KCPA01002589
VERSION     KCPA01002589.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 765)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 765)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..765
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="284931tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>765
                     /note="ultra-conserved element locus uce-6121"
BASE COUNT          252 a          126 c          136 g          251 t
ORIGIN      
        1 tagctacatt gcagtaagca aacagtaaag tcttaaatga tcaatacttg acaagagaca
       61 tgtcacaaac ttcatgtata ggtcaggcac acatgaagtt tttcaaataa atcgactgac
      121 ttctggacaa ggcacataaa atgtcagttt ttatctctga gttgatattt ttctcacaga
      181 gtaaaatatc accccctcag agatttgatc aaaaagatag tcactcctga cacaagttta
      241 aaatcaagtg gaaatttttg tcgctacctt aatctctgat ttgtagaagg ttgtgctttg
      301 ggatatttgg tatgtctgag aattgctacc aaagagccct tctgttcttt aatcgctgca
      361 ctaaatctta acaaacgtga gcatgaaaac tattgtgctg tacttgtgag gcatatatca
      421 aagttatatt tttaaagctt ggaaaggcag ttgaatcatg catgctcttt atggagctct
      481 gatcaggctg ataaaggcag ttcagcttca ataaacgctt tttaagtgaa tgttttggaa
      541 agcgaatagg aaattcaaag ctcaaactgt tgcctaactg ctcccatagc actttgatca
      601 cttcgctgct gacattttgt taaaaatgtc ttgtttttat taaaattttg ggatctgggg
      661 atttagaaat ttaagtgtag tcactaaaaa aataatatac agtaaaactg agtgacataa
      721 cttattaagt actttgtaca catttcttaa aacagaaaac ttttt
//
LOCUS       KCPA01002590             692 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 285043tic ultra-conserved element locus
            uce-431, sequence.
ACCESSION   KCPA01002590
VERSION     KCPA01002590.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 692)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 692)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="285043tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>692
                     /note="ultra-conserved element locus uce-431"
BASE COUNT          168 a          136 c          149 g          239 t
ORIGIN      
        1 tttgtcactc tccactttaa actgccattt ttcttaccag tgaactcata aaatccctga
       61 ggatagcttg tgccttctcc cagccctgtt acatctgtgt taacaaaact aaatactaaa
      121 tcttgaattt gaggatgttt attgcactac ctaaaacgtg cattatttct atgtctaata
      181 cactcttttc ttttctcttt cagtcttggt ctttgtaatg ggcaaagaag gggtccatgg
      241 aggcggattg aataagaagg catactcaat ggcaaaatac ttgagagact ctgggttcta
      301 gttgttaggc agactgttaa gtattagggg aagattgcta ttaaactttc ctggcggtga
      361 gctttaaacc ttacattctg gaaactttac tagcaatgca gggtgatggg gtatgaacct
      421 gtgtctcctt tgtatccctt tgttggtggg gaaaggtgtt tttttgtttt ccctttaatt
      481 cttttcattt ctgttttgtt tccttgtgta ctccagcatt ggttatagtc atgggaaagg
      541 aaggtgtcca tggagggaca ctcaacaaga aagcatatga actggcttta tacctgagga
      601 ggtctgatgt ctgagcagcc tctccccata gctgtctgca ccacttgtgc tcagtgctac
      661 cagaccgtag atggtagttt gtatttaccc at
//
LOCUS       KCPA01002591             685 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 285153tic ultra-conserved element locus
            uce-4769, sequence.
ACCESSION   KCPA01002591
VERSION     KCPA01002591.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 685)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 685)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="285153tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>685
                     /note="ultra-conserved element locus uce-4769"
BASE COUNT          212 a          107 c          124 g          242 t
ORIGIN      
        1 tttaaagctt agatactgag tagttttaac tggctttatc tttcatatac atatagacca
       61 attgaagcat gaacgtggat tgtatttaaa catatacaaa gaagtgacag ctattcatgg
      121 ttcaagtatt aagcagatca tactaccagg ttttcaaagg attttagaca caattatctc
      181 aagctcccac aaactaattt tggcgacagc catgataata ggtcaccatg ttgtgttctg
      241 tttgaaatat ttttttgtaa atgtctgcac tgaagatttc tttttgtttg cctttatgta
      301 aattttttac gtagctattt ttatacactg taaggctttg ttctgggagt tgctgttaat
      361 ctgatgtata gttttatttc agttgttttt atgacaccct ttgagcaggt acatgtctga
      421 ttctggttgt tatcagtgaa gcctctgctt tgtagcaagt accttaaatt tgtcttaaag
      481 gaaaatctca aactcctttt tcattctttg aaatcatggt aaagcgggtg acagctgtga
      541 caagaatgaa ctaaattgtt aatgaaagtg aacatttagc taaacaagct agataaagag
      601 cttccctgaa gaagtctggg ttaagtaaga aacactagga aaaaatccta gcctgcataa
      661 aaaatccttt tcttctagag caaga
//
LOCUS       KCPA01002592             685 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 285259tic ultra-conserved element locus
            uce-453, sequence.
ACCESSION   KCPA01002592
VERSION     KCPA01002592.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 685)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 685)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="285259tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>685
                     /note="ultra-conserved element locus uce-453"
BASE COUNT          178 a          139 c          118 g          250 t
ORIGIN      
        1 tttcttggtg ccttctttct ttagattgct agcaagctct aatttaccac aacatgttat
       61 ggaacttgtt ttggaaagat gtttaaatgc tgtatactgt ctgaaagcat atttaaagct
      121 gttgctttcg atttttcttt taattccttg ataccactgc taatgtaaag gacatggatt
      181 gaagagagga tcttcttttc ctaggcaatg tgttattgat gagctggcat ttgccctgtg
      241 gctctccccc aggattgctt acatctatta ctcacacaca tcgattggtt aatttgataa
      301 ttctatcacc aatcagcttg tgtctgacct tttgccatgg caatgatggc agagtcttca
      361 tttttacatc gcatacctgc tagattgacc tttctgagga gaatgtcaag acatcccttg
      421 atcttaacct gtcactaaat ttgttagaat tacactgtcc cttaaccttg atctgttgta
      481 tttgtaacat tcaggatatg caatttgtgc ggaagtattc ttacataact tatgccagtc
      541 aaagaataac actttcataa ttaaaaatta gcttcccaat aggaaggtgt tctgttttcc
      601 ttccattcat ctgtgtagct ctcctgcatc attagctagt ccctaagaag tactttccct
      661 ttctgtgacc actgaaatta gaaga
//
LOCUS       KCPA01002593             368 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 285362tic ultra-conserved element locus
            uce-6072, sequence.
ACCESSION   KCPA01002593
VERSION     KCPA01002593.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 368)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 368)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="285362tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>368
                     /note="ultra-conserved element locus uce-6072"
BASE COUNT          124 a           60 c           62 g          122 t
ORIGIN      
        1 atttaaattg ttttagagca gatggctata ttaacacttg tcttttagtt ttgaattctg
       61 tcagaaatcc tgaagtgtaa cattcacaac cattggtact ttttcagcac attaagtttt
      121 tatgaaagta aaagttaatt acatatgatg actaaactcc agggtccata attagctgaa
      181 ctgaatggat gcacatcagt aattaaatga catttcattg tactgagaaa ccctaccctt
      241 aaaaagattg gaatcggtta ttttcttctg aaaacctgaa ggagcactgt gcaaaatata
      301 atgagtggaa accataatta tggatttgtt ccaacacttc acttctcagc tttgacacgt
      361 gaggtaaa
//
LOCUS       KCPA01002594             761 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 285475tic ultra-conserved element locus
            uce-583, sequence.
ACCESSION   KCPA01002594
VERSION     KCPA01002594.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 761)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 761)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..761
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="285475tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>761
                     /note="ultra-conserved element locus uce-583"
BASE COUNT          222 a          137 c          142 g          260 t
ORIGIN      
        1 tttttgaaat gcaccaaaag cttttcttct gtccctgaat catgttttgg ctctgaaatt
       61 aggtgggcac atctgttgac ttaaaacatg caatcttcat gtggatagaa agttatattt
      121 ctaattttga caaatagtta tgttttgttc tgtctgacgt gagttagggc acaccattgt
      181 tctttgtttc tagcaagtca ctgaagtact attaagattt tctttccatt tcttagaact
      241 ccccagggtc tatagttttc tttgcagaaa cagttgccat taaatatgct gtatgtcaat
      301 gcagcagtga ggtggttaat tttgactgaa tattatgcta tataaccact tggcatttaa
      361 cttgaaaaat gactttctgc ttcacctgtc agcagcccag ttctcatcaa ataagtgagt
      421 gagaaaaatt tttaaatttc aatttcctga tgctattaga cactacttct tccatactta
      481 aacagtttag cagtgcatgt acatgttttg gtattcatgc catgcatcac actacatgct
      541 attacaatag cttttttgtt taaagggtaa agagatgcat ggatctttat cttggggtta
      601 ggaaaatgta ttgcaggaac atggccaatc aggtttctga ataactttgt aacatagtac
      661 cataaccctg gtgcagtgca aggaatttaa aacatgaggt gcctctgagt ccacagaaag
      721 aaaatgttct agatggagac accagcacag caatcctgca c
//
LOCUS       KCPA01002595             401 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 285587tic ultra-conserved element locus
            uce-3921, sequence.
ACCESSION   KCPA01002595
VERSION     KCPA01002595.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 401)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 401)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="285587tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>401
                     /note="ultra-conserved element locus uce-3921"
BASE COUNT          112 a           77 c          119 g           93 t
ORIGIN      
        1 tcacagactg tgatccaaga gatacatttg tagaggaatg agggaaccat atttctgtag
       61 cataaaaaat gaaataaatg agctggcttg caacactagg tggcagaggt gggatctgtt
      121 ctgctctgag cgctgtccta taaggcattg cttgtttaag tacagtcgca tttagttgga
      181 gctgcaggag agagacagag attctctgtg tttacagcca gcccaggcta cggtggagca
      241 tccaacctgt caagcacttg aaggggagag tgagaggtta tttgggaatc tggccaccgc
      301 gggtcagctt gcactgcgac tggattgtca gagctggcaa agcagagccc agagggactg
      361 aagggagaca cgaatcccat tttctttgag agaagcgaag a
//
LOCUS       KCPA01002596             237 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 285685tic ultra-conserved element locus
            uce-4765, sequence.
ACCESSION   KCPA01002596
VERSION     KCPA01002596.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 237)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 237)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="285685tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>237
                     /note="ultra-conserved element locus uce-4765"
BASE COUNT           78 a           52 c           43 g           64 t
ORIGIN      
        1 aagttcaaga taaggataca tgaacttcat caagtttaag caaactgtct ttgtagtaat
       61 taccaaagca tgcttttttc tcataaacca agtgatggat cagtgaagag ttcaagtaaa
      121 atacacaagc tttaccccat tacgttcgta gcaaacactc cctgttggac tttgacccgg
      181 ggcagctgga gatttactct ctaaattgtg aggaacagca cacacaacct accagtc
//
LOCUS       KCPA01002597             798 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 285795tic ultra-conserved element locus
            uce-2082, sequence.
ACCESSION   KCPA01002597
VERSION     KCPA01002597.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 798)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 798)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..798
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="285795tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>798
                     /note="ultra-conserved element locus uce-2082"
BASE COUNT          244 a          161 c          128 g          265 t
ORIGIN      
        1 acttaaatag cgcactttaa aacaaaaaaa actccaattg gcttttcata cacccaccct
       61 ccccaaaaat aacgcacttg aaaaactcaa atgatatgaa aaggcttcaa ggcctctttt
      121 ctccttttca cagcactttt tttttatttc tgtttgcagt aatctgcctt tcactttctc
      181 attgctacag aacaaacgag gaggctcagc actttgaaaa gggggctcaa tgtgtaatgg
      241 gtccactaga attaatttag ttgcaccaaa tccattgagc agtgaggttt ttttctcttc
      301 tcaaatcatt ttgagtcgga tgcagccccc agcctttgta attctagtaa agcacttaaa
      361 gtgcacagta ggtgttcatc aggaccatct ggtcaaaagc aaaacaagct gctgattttg
      421 cctttgaata gaatgaagca agtgtgaatt agtctcttca attagcacta ttacaacctg
      481 tcaagtgcat attgtaaaac aggattatta cagtattggt caccagtgca attatttact
      541 ctctgccttt tcttgcatat aaaaatgccc atgtttacta gtttttaata actgaagatc
      601 gtttctttaa tgatatgcac gtccaaaccc accaaaatca aattacaggt tatgaaacat
      661 attctgtcag gaatatatta agtttcataa ttaagtgaga agtgtgccct ttcttcctct
      721 cttattgctg tttctgttgc agaaaatttt tcaatggggt tatctaaaca gatctcttca
      781 gtcaggtatt aagatatt
//
LOCUS       KCPA01002598             537 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 285906tic ultra-conserved element locus
            uce-6252, sequence.
ACCESSION   KCPA01002598
VERSION     KCPA01002598.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 537)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 537)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="285906tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>537
                     /note="ultra-conserved element locus uce-6252"
BASE COUNT          129 a          128 c          107 g          173 t
ORIGIN      
        1 tttcatgtgt ctgaacagag catgggaaaa tgatatgtgc tggcaacagg gaatttcttg
       61 tgaccaggtc tcatgagact accttccttt tcacccccag gacctggaac ttccccctcc
      121 cttccaccct ggtgtgctgc caccgtcttt tcccctgctt tctgatgtga taattctcac
      181 tcctgtttgc acacacagat ggagctcaat ggatccctaa tagcttcatt tacttaatta
      241 acatgcaatt agcttaatga atattttaac ctcattatgt agttactcat ttttttctgt
      301 tgtgggtaag tcttgtgccc agctctggac tgaaggacaa gccaaattag tccacttctc
      361 caatcatatt caaggggttc atacagtcct ttttacatgt cccatctatg atgatggaag
      421 cagaagattt tttcttctcc ctcccctgac ttagagatga gacagaagca gagggtggtg
      481 atattgaaac cttgtggttc tgctgacttg aaagctctaa ggctttcctg gcagaga
//
LOCUS       KCPA01002599             577 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 286012tic ultra-conserved element locus
            uce-5456, sequence.
ACCESSION   KCPA01002599
VERSION     KCPA01002599.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 577)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 577)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="286012tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>577
                     /note="ultra-conserved element locus uce-5456"
BASE COUNT          185 a          108 c          116 g          168 t
ORIGIN      
        1 atctgtcctg aaatgtaatg aaaaacagaa acttgcagtg cagaatttta aaatcataat
       61 tctatggctt tgtttcttat tacttagttt gagctcgcac aacagaactt ttgcattgaa
      121 atattttctc attttaagga attaatggct ctccaccagc ccttcaacat gtaaaatgag
      181 taggttactt gtgtccagta catccaaaaa gagccaggat aaaataaaca taaggagttg
      241 gatatcttgg aaaaaatctg tcatgggttt gggttaatca tctccagaag aaattcaact
      301 tgatgcctga aatgtaagac ttcttggaga aagcagtaaa gcctgaggca gtgttgatct
      361 gaaggagcgc tctccatggg tcagagctgc tctgctggca gagtgcaaac ccagttcaca
      421 acagtggtac gctgaaaact tgtaaaggac agcaggggcc ttacagtgca cgcacttaag
      481 cttcagttac atagttctac tggtccagtt tcatattata aaataaaact gaaaaataaa
      541 atctgtgcct aattttctag cctcctgtct gtcaatg
//
LOCUS       KCPA01002600             755 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 286126tic ultra-conserved element locus
            uce-816, sequence.
ACCESSION   KCPA01002600
VERSION     KCPA01002600.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 755)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 755)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..755
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="286126tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>755
                     /note="ultra-conserved element locus uce-816"
BASE COUNT          251 a          130 c          121 g          253 t
ORIGIN      
        1 ccaagttact ccccattcct ctttaaacaa ataaggttag caaccctttt gccattcaca
       61 attcaacatt cacactaaat taatttttcc aaaagtaatt caaataaaag ctttgctgct
      121 gctacccttt tcagagctgc aagattgaat aaggcatctg aataaaattg tgtattacag
      181 ccttctttaa tatttaagca tgacattcat tgatttgttt cttgttttct gcaaaccttg
      241 acaacatgat aaaataaatc ataagaagaa aatatagtgg taacatcttt tatggacttc
      301 acatagtcat caatctcaag ctgtgagtga attatcagtg cagcaaaaag atctatgttt
      361 taagagctcc aatagcacac tagctagagg tttttcacaa gcaaactcaa ggcgagtgac
      421 tgataagcat cattattgtt ttctgagagt ctggtttata gtgtgctgtg gaggtgttgg
      481 catatatgtt tcagaaggaa aggtttgatc aattctaagt agacatctac taacatataa
      541 aaaatataac aagggttcct gctgagcagt attaaagtac ctattgcacc atgtcagcat
      601 gacaggcccc atgttgtgtt tttgattata tttaatatag aattaacctt tcttaatgga
      661 acatattgtg catgcaacgg gagtgaaaaa tatttacaaa tatcatcctt atttaggttt
      721 taaggaatac tccttttcaa tttataaaac ttctc
//
LOCUS       KCPA01002601             444 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 286223tic ultra-conserved element locus
            uce-1879, sequence.
ACCESSION   KCPA01002601
VERSION     KCPA01002601.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 444)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 444)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="286223tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>444
                     /note="ultra-conserved element locus uce-1879"
BASE COUNT          180 a           56 c           94 g          114 t
ORIGIN      
        1 gaaactttgg ctgtgctccc tcttttcaaa atgcaactat gtaaaggtca cagaggagga
       61 gatgaaacta ggagttgtaa taaggaagga gaaataaaaa ataatgacag aaataaattg
      121 tcataagagg ggatacagtt atgatttatt gtgatattct acaaatttgg aggtgattaa
      181 aagccaccta aaattcacat taacaagtca cataaaaatg gaattaaact agtgggcata
      241 atgtggcagg gtataaagaa aaatcatgac agaaataaat tgacagaaga atgatactat
      301 tcaagtttta ctctgtcgcg tcacactgac aggagactat ttcagagttg tggttgagtt
      361 tcattaaagg cccacattaa gaatctcata aaagtgagaa gaaattagtg accataatgt
      421 ggcagaggaa ataaagaaac aata
//
LOCUS       KCPA01002602             779 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 286331tic ultra-conserved element locus
            uce-1138, sequence.
ACCESSION   KCPA01002602
VERSION     KCPA01002602.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 779)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 779)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..779
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="286331tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>779
                     /note="ultra-conserved element locus uce-1138"
BASE COUNT          239 a          151 c          156 g          233 t
ORIGIN      
        1 gctgagcagt tgttcttgag ccgagcttta aatgaagcat gcagaatttt taatttggga
       61 agaagatgat ggagagtagg cttgaaataa ttcctgagag aggagttggg ctatagtgga
      121 aaacatgtca acaaacaaac aagatctttc caaatccctc tagtcagcca tctccacatg
      181 gtatggtatc tgtccctgtc ctgcactgta ctgctggagc aggatgactt tggtgtctgt
      241 tccatgcaat aacatttgaa agtttcaggt ttggctacta tatgattgca gtttcagtag
      301 taaagggatt attctgagag gcatacaaat gtgattgtct cccagcagat ggtgcgcact
      361 gcttcacctt tgagaaaagt taattaagcc aagcatattg tgcccataga gaggaaaatg
      421 tagatgaata ttgagcaatc aaactcagtg tctccttttt tcatgccttt gcaatgggac
      481 acagaatccc attgaaaaag aattatgtac agaatcaaat taattcacgt ccaactttac
      541 tctcttccca cgttttaaca ggggtgcaca ccaggccctt cagaagtttt gtccacaatc
      601 aatgggccac actgctgtgt ccactaaatt aaatgaatca gtgcagaaaa atctcttgtg
      661 agatattaaa agggtgaaag actgtttaat tcaaatcctt ccgtagtctt ttcacagccc
      721 cttttacata gtacagtata aattattaac taactccttt tatctcagat gaaattaca
//
LOCUS       KCPA01002603             332 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 286434tic ultra-conserved element locus
            uce-2124, sequence.
ACCESSION   KCPA01002603
VERSION     KCPA01002603.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 332)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 332)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="286434tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>332
                     /note="ultra-conserved element locus uce-2124"
BASE COUNT          119 a           65 c           48 g          100 t
ORIGIN      
        1 agaccgtgtc ttcaaacaca ggagaaaacc ccaaacccat caacaaccaa aaaagcattt
       61 acaggttatt ccctaaccat ggctagatgt attgcatcat aaaatgtcaa catcaaaaca
      121 atatagaaaa aataattaca gacagtggta gtgttgtaag ctgataagga ccagatggtc
      181 ttttgtattt acggtttgcc ttgtgcatac aaatgctttt gggatctaat tagccttcta
      241 caaaactcaa actgggtaat tactatcatt atcccctttt caaataaatc tgaagtctaa
      301 actgcaatta agttttttat cttacaattc at
//
LOCUS       KCPA01002604             631 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 286547tic ultra-conserved element locus
            uce-1217, sequence.
ACCESSION   KCPA01002604
VERSION     KCPA01002604.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 631)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 631)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="286547tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>631
                     /note="ultra-conserved element locus uce-1217"
BASE COUNT          193 a          107 c          141 g          190 t
ORIGIN      
        1 ccacctggag gaattttcct ggctgggaac gtcgtgctgc tgggaatgag caagctccaa
       61 aagtaatact gacagacttc agaattacga tacactggag ctgcggcgta attctttgtt
      121 gaagaagtta aaaatgttaa ggcttattgt tattccgagt tgataatctc tgccttgctt
      181 taataatttt tcctcatgcc tggatagcct gcgagttgca caataatcac tcacacagct
      241 ttgtaatcaa tgcccaaagt aataggattc cgctggccaa cggcaattaa taaatttgtg
      301 tcttttttaa aacactagca agtcgggcct gaaatacgac tgactggctt tcctcatttg
      361 catatttatt gcagtggaaa aattcttgcc gaatgattga tgttgagcct gcctcttgaa
      421 ttccaaacag cacattatta tgaaatgaaa aatgccggcc atacagttga ttaaagttga
      481 agacagtgga atcggtgttt tttaagattg tgggagaatt aaaggcatat tttaatagat
      541 gttgacaaga agtgaactaa caaaagcaaa gcaaaggatt tgcttgaaaa gatttaatca
      601 aacgtgtttg gtgggggatt aattgctggg g
//
LOCUS       KCPA01002605             642 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 286657tic ultra-conserved element locus
            uce-703, sequence.
ACCESSION   KCPA01002605
VERSION     KCPA01002605.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 642)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 642)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="286657tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>642
                     /note="ultra-conserved element locus uce-703"
BASE COUNT          184 a          131 c          126 g          201 t
ORIGIN      
        1 tttggctggg aaaattctga tgtatacact gtataaaagt gccaaaataa gaaatgtgta
       61 gactgcagcg tctctggtag taaatctttt ctgtaatcct aacttcatat ttccattgaa
      121 ttgttcctct cgagctgtgc agacagttga agtatttgag tgtagtcaca tatgctttgg
      181 tgctgctaac agccctaaag ttggtaatcc tgaggcacaa acggggccag ggatgactcc
      241 ttgggctgca aaatattaca gcacacctta tatagtgctt gctttcgaaa tttcctttgc
      301 actttgttta ctatatattc caatagtgta atattaaaca aaaacagtgt gtcctgtgcc
      361 agaatgattg attactacac cgtggcaagg tcacctccta ggaacaggct gagtgcagta
      421 agggctgtct gactcataca gttaacacta tatccgcatt gtatgaatgt caccagcaat
      481 ccagtgattt attgcttgga aggctctgtt caattttttc tgcctgacca aattgcacat
      541 tttctagaaa aagaagcaaa aatatttcag cacatggatt accccaagtc ctcatttctc
      601 ccactaggtt caatgagtct tttcaaagat gctggtcatc aa
//
LOCUS       KCPA01002606             666 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 286765tic ultra-conserved element locus
            uce-2196, sequence.
ACCESSION   KCPA01002606
VERSION     KCPA01002606.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 666)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 666)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="286765tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>666
                     /note="ultra-conserved element locus uce-2196"
BASE COUNT          239 a          113 c          118 g          196 t
ORIGIN      
        1 tcctttaaga tatgtggcaa ctctacaaga aatagttttt cctaacaaac aaaggcttct
       61 aataacttgt gagcaaaatt aactgacagt gctttgttaa atcaaaaagt gattacttga
      121 atggtcataa tcatgcaatt atctcatctt cacttttttg aagacggaat ctatatctac
      181 tcctatatcg ggaatgagta gggggagctc taatgctgaa cctgtgatgt attcataaat
      241 cagtactttc agagcctgtc aggggctcca taatgagggt cattattcag gcagagtgtc
      301 aaaactacta tcaaaggacc ttctcagaat cacaatcatt ctgtttcttg ttaaataagc
      361 aatgtagtac acaaaaatgg caaacaagaa gcaggtcaat ttgatacagt atgagggcac
      421 agagacctct agagtaattt accctgtggg aattctgatg gtttgtgaga taaattatat
      481 acaccctcag aaatgattaa tggtaataaa atcccaggaa tattttcaga aaaaaagtcc
      541 atatgtacat atcttcagta acaaagaaga cattttctaa aacggaacac ttaaagaaaa
      601 ttattattaa aactgcaagt agctctcggg aaagctacta aatcttatta caaagttggc
      661 agcatt
//
LOCUS       KCPA01002607             791 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 286878tic ultra-conserved element locus
            uce-2488, sequence.
ACCESSION   KCPA01002607
VERSION     KCPA01002607.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 791)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 791)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..791
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="286878tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>791
                     /note="ultra-conserved element locus uce-2488"
BASE COUNT          248 a          178 c          156 g          209 t
ORIGIN      
        1 aaaagcatct cctacttatt aaattgtaat tctactttca gtattgaact ggaatccaca
       61 gacaaagaaa taagcacctg aacacctgtt tgcctgtaaa atatgctctc ttgaaaagct
      121 tgaaatatgg ttaaataaat aaatgaacag aagaagtttt tggccattct cgcaagagca
      181 cagaatccat tccacacaca cattacaagg attaaacaga aagggaaact tacagcttta
      241 gacacacttt gtgtctcaat accaactgca gcaccagctt ctctgtaagg attatcaagg
      301 ctacagcccc atgcagctgt cagtccctgg ggctgtaatt cagctatcct gctctcactc
      361 tatccatcac atttacacaa atccccaagg tggactgcct tctaaatgtc tttaccttgt
      421 gcattatcct ggggcttaac aatccaatat tggtgcagcc aaggataatt actctccatt
      481 gatgataaaa caccctgaat cctgtcaggc atggcaattt gcatcttaca gtgctgagga
      541 tcaatagata caacaaagga gtgaaacctg attagatact gctgcctctc aatggaaagg
      601 gaagagctga ttgttttgca gggttgaagt cctggttaaa agggaaacag aggtctccca
      661 ttacaacaca gtccccaagc ctgctgttca cctagaaact gctgcaggga gtttgagact
      721 ccaggagaaa gcagttgaat gaacaaccag gtcttacaga ctgggagtta tttactttgg
      781 ccagtgtggc t
//
LOCUS       KCPA01002608             640 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 286986tic ultra-conserved element locus
            uce-1446, sequence.
ACCESSION   KCPA01002608
VERSION     KCPA01002608.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 640)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 640)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..640
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="286986tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>640
                     /note="ultra-conserved element locus uce-1446"
BASE COUNT          181 a          137 c           99 g          223 t
ORIGIN      
        1 ccccaaagac agctggattg caaaattgcc cataaaatta tagggagtca gtctaatagg
       61 aaatgttatg aattttaacc tctggcttct atacagagac cactttcata tggtctggtt
      121 ccttagtgga attattcctc tgtgtatctt tatatcattt tcttagcttc taaccactgt
      181 atttctgcac agtttcgtat ctgctagccc cagcatttcc agcctatgaa aacctcataa
      241 atctacttca tttttctaat aagacatgaa agtccttaat tggccttaat gaaatgcact
      301 taaagggcaa taaacgtgtt taagcccctc tttcagggtg agctacagta ctctcactct
      361 gctctgtttt agcctttgtg gtaattaatc acttattcat atgtggcaca tcagtaacaa
      421 gatcaagcaa ctactgcaca attgcatgat aataagctgc tcatatatgt gtcaagattt
      481 agcaatcctt tttaaagcct aatttaaact cattttacaa ctaagcaggc tgcttctctg
      541 aagtatttct acccagtatc ttttttacat attgctgctg aaaggccatc tttttatttt
      601 gtttatagag ctgcatttgc ccgaaatcta ctcatggcac
//
LOCUS       KCPA01002609             517 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 287096tic ultra-conserved element locus
            uce-4652, sequence.
ACCESSION   KCPA01002609
VERSION     KCPA01002609.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 517)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 517)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="287096tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>517
                     /note="ultra-conserved element locus uce-4652"
BASE COUNT          184 a           99 c           79 g          155 t
ORIGIN      
        1 aaaaatattt tgtgacccta acatacttaa ataaaaataa tctgctctaa ctggaatttc
       61 atatcagaaa ccagcaaaca gatttccatc taaattattt tgtcaacagc atggtagtat
      121 ccttgctaac cttatatggc accagtgaat aattagatac acaggggtgt gactccaatt
      181 gaaggtgttg gcattgtagc actctgtgaa aatattaact atgaggttaa ctccaatttt
      241 ctcttcttta attaaatgca catggtacta atgaggtaac ctactgttcc ttgatagcac
      301 taattagcta agaggagagc acactctcac actgcaattt aaacctaaaa ataaggttga
      361 aatatgctaa ttgcaggcaa tttaaaacag tacaagttgt agaactagtc ataataagga
      421 aaactgactg ccttacagct cttcagctgt aactttggtt aaaatcaaaa caccccacat
      481 ttttagaaca atttggcaaa atatccatca gcctcct
//
LOCUS       KCPA01002610             632 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 287202tic ultra-conserved element locus
            uce-899, sequence.
ACCESSION   KCPA01002610
VERSION     KCPA01002610.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 632)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 632)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..632
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="287202tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>632
                     /note="ultra-conserved element locus uce-899"
BASE COUNT          211 a          114 c          123 g          184 t
ORIGIN      
        1 ggaactgccc cacagcagca actcgaggga ttcctctcag aatcgagcaa aacatcacga
       61 gtagaccttc cgcataatga aaaactgtta atggccatct ttagtaacat agcaacagcc
      121 aaacccttga aaagaggaag ttttcattga tttcatttta aacattgaaa tttgctataa
      181 tgtagtgtat gaaataagtt ttgaaaggaa gctgatgatt aagaagaaat gcagtgggca
      241 tttaataaat ggaggagccg caagataatt aactggcatg cataaagatt catgctttat
      301 accaaaattt taattttgca cataaatgtg cctgatgtag gcagcattta atcacctagc
      361 tgacaggagt aactactttc atttaacctt gactgaagat catgaattct aacaggttta
      421 attggataca tcatttaaca gaatgaacag agcaaatttt tctcaattca taggttctga
      481 ttgacatgca ccagcaataa ggcgttgcac aattaaagct gatctgtatt cctggcctgg
      541 gcagcaattg ccatagtgat gtgacactgt ttgatcactg tggcactgaa actatactga
      601 atttcccctt gttttgaaaa gggcaatgct tt
//
LOCUS       KCPA01002611             737 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 287314tic ultra-conserved element locus
            uce-4486, sequence.
ACCESSION   KCPA01002611
VERSION     KCPA01002611.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 737)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 737)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..737
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="287314tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>737
                     /note="ultra-conserved element locus uce-4486"
BASE COUNT          192 a          143 c          173 g          229 t
ORIGIN      
        1 tgatattact ttctgtagat agttcttgaa tccctgaatg attaagtaaa tgtttcttga
       61 atgttataaa atcaaattct ctgtcatgag gaatgtggcg cagaactgct accatggacc
      121 tctggagggt gagacgggag ctgtttcagc aggcttgggt ttctctctgt ttatgtgaaa
      181 cggacattgg catatcttgc ctggactttt cctgtggggt tcatatggta ggcagggtgg
      241 ggaatagttg tctgagccat accaaggtca gcctgctaga gctgacagtt tctgtctctg
      301 tacaaagaaa agaatcaata cttttggact acggctgtgc cctcagtgta aaacaacaaa
      361 catgcagcgt ctgacatgtt tctaggtgat ttgtggcaga acctcttgtc tgatgtgtat
      421 ccaggagctg ctgtgttact gctctgtgct tttcttctct ctctcgagct ctgtgatgtc
      481 taatacttta ctcaggtaca gaggcgtgtg ttctacccta cagctacttg tcactcaata
      541 aatcacacct acaagcacag tctgcacata gtgatctggg ctttaacaaa ggatcagagg
      601 gacaaagtgc aggcaagata ctgtaattat aacaaaaata aaacattcag ggggttgtag
      661 caaaggcatg ggctcccagg cactaataaa atgttattag aattgcagtt ttgtttcagt
      721 ccttcaggtt tcatttt
//
LOCUS       KCPA01002612             443 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 287418tic ultra-conserved element locus
            uce-5272, sequence.
ACCESSION   KCPA01002612
VERSION     KCPA01002612.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 443)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 443)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="287418tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>443
                     /note="ultra-conserved element locus uce-5272"
BASE COUNT          150 a           65 c           72 g          156 t
ORIGIN      
        1 ttaaaatgta tttttctttg tattttattt tgcagcttat gtactcaaag catcacctaa
       61 gtaccaataa cacattcttg actgaataat gatgtatgtt gaatgttact ttttttgtct
      121 tataaatgga tggcaattta cacagctgtg gatgtgggat gtttcaatcc cagaccatgt
      181 tgtaagaaaa attgaatgac agtgagcaaa acagcagtaa ttataaaact aattactaaa
      241 tgctgatgat gcccataggc tttgcataac taaaattaga aaaggaaatt gctttcggct
      301 tcagagaggc aacatgctag ttatttcact gtttcagtca aaatggaaca tggtgtataa
      361 agttcaatca cacattagtt tatgcacata ttttttcata ctaaaatgtt aaagaattca
      421 gcctttttgt cttttaatac aaa
//
LOCUS       KCPA01002613             502 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 287529tic ultra-conserved element locus
            uce-1508, sequence.
ACCESSION   KCPA01002613
VERSION     KCPA01002613.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 502)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 502)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="287529tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>502
                     /note="ultra-conserved element locus uce-1508"
BASE COUNT          153 a           99 c           96 g          154 t
ORIGIN      
        1 agtaccagtc ccactctgtc tgcagttaat aaaaccccaa accaaaataa aatcctgacg
       61 gcacagcact gaactaatct gacatcagct tcttccccag aaatgtttta agcagcaaga
      121 caatgtccta cgttttttgg caatctgcag atcagataga agagtctagc aatacaacag
      181 ggatgtgtaa tctgacatga ttagacaagg ctctttagga acagaacatt cataattgag
      241 acaaagaaag agtattaata acactttcct aacacggcag ttagccattt tatatttcct
      301 ttctttaatc ttagtgtttt tcaacaaatc atgagattta atagcgtgtt ttggcagatt
      361 agaggattta tggcccagat gttttttgtt ctaaaaatgg attagggtgt aaagtttgct
      421 ggaatccatg gaacatgttg aggcaagccg gtcattttgt gtgtgattag tgcctgcctt
      481 ctgtctcaca gtccctccat ct
//
LOCUS       KCPA01002614             509 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 287634tic ultra-conserved element locus
            uce-7566, sequence.
ACCESSION   KCPA01002614
VERSION     KCPA01002614.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 509)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 509)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="287634tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>509
                     /note="ultra-conserved element locus uce-7566"
BASE COUNT          136 a          128 c          109 g          136 t
ORIGIN      
        1 tctccccact aaaggagacc tgcagagctc tgtccagaaa gggagcaata cagccgcctg
       61 ttcccacaca agtggggcga aaggcgagag gctttgagaa ttccctgctt cttttcctcg
      121 cctccctctt tttctcttcc tccaagaaat cacagtttcc cccctactcc tcccgttgga
      181 aagaaagaca gagaagacat tcttgacatt ctttgcagag aaaaggggtt aaatgtctga
      241 atttgggggt caccatgtta tacaaattgc aatctaatcg tttttacaag aacacacgtg
      301 tgctaagaaa aggagccatg gacaagaaag aaaaggggat agacaacctt gtcctatctt
      361 ccccctcaag gttttggact attgtcatgt cctgtctctc tcccctcctc acccccgaga
      421 gggagaacat tggttttata gttaaattgg ttcgtaaagc agaagggctt ggtgccattt
      481 ctgtttgttt tcccaaataa aggccccag
//
LOCUS       KCPA01002615             462 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 287744tic ultra-conserved element locus
            uce-3931, sequence.
ACCESSION   KCPA01002615
VERSION     KCPA01002615.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 462)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 462)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="287744tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>462
                     /note="ultra-conserved element locus uce-3931"
BASE COUNT          141 a           93 c           96 g          132 t
ORIGIN      
        1 ctggatgcat tcaaggtgtt gcccttatct ggcaggaatc acttctgagg taaggtgcta
       61 accagaagca aaggactgac ttatctgtgc tgtgcttcac tctgaaaatt tagtgagtgc
      121 ctacctgcta ctgctgctct ttcttttcgt gctttcttgg cacatgtagg agaggataaa
      181 agcctaatgg gtgcgagtgt cagcacaata taaattgctg caagaaaaaa cttgatgcat
      241 ggcttgggat ctgaaagaag aatgtccacc attgtttgtg attatggatc acatcacaat
      301 ctaatagcaa tttttattta atcaataatt tccatgctga acagacagcc ctgttacaga
      361 gaatcgacaa gcaagtactg atagcgacag ggcttgttat taatctttac cctgccaaca
      421 tttcaaccaa actaaaaaag caccaccaag atggatttag aa
//
LOCUS       KCPA01002616             575 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 287853tic ultra-conserved element locus
            uce-3032, sequence.
ACCESSION   KCPA01002616
VERSION     KCPA01002616.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 575)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 575)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="287853tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>575
                     /note="ultra-conserved element locus uce-3032"
BASE COUNT          186 a          103 c           92 g          194 t
ORIGIN      
        1 taagtatgaa tggcagcgat agctaatgta ggattgagtt agttaaagaa aatcaatcag
       61 aaatcctcac tatagattac tatccagttt attctgcctt ttccagctaa cacttctcat
      121 ccttgacttt gaaacccaac agtttaaact cggttcttgt ttcagtggac taatcccctt
      181 tcataaatca tgttcaagtg ctgaaataat ttgcacatcg tttaaagagt atttgctttg
      241 aaacattcac ctcaagccct tttgtatatc ctttctctct gaagatttgt agtatttgtt
      301 ttgttctctg aggtataaaa gacctgggta aactttattc ctgttgtttc aagattagtg
      361 aaataaaatg catatttatt caactgggac tgaaaggagc tttagtaaag acgatcatac
      421 atacaaccca ggggaatgtt ataatacaaa atgtctgcct taaaatctct ttaggtttgt
      481 tcaaaacact attgaaggac ttaagtttaa agaagttaca aatccatatt ctttgttctg
      541 aagaggcaga caccacgtaa acaaaataaa ctcct
//
LOCUS       KCPA01002617             531 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 287954tic ultra-conserved element locus
            uce-5097, sequence.
ACCESSION   KCPA01002617
VERSION     KCPA01002617.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 531)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 531)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="287954tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>531
                     /note="ultra-conserved element locus uce-5097"
BASE COUNT          166 a           83 c          111 g          171 t
ORIGIN      
        1 ttcctgttaa atcttgtcca tatagaccag cagttcaaat gacgtgcttt atgggtctca
       61 ggaggaaatg tatggctgac ttttggttta gtaacttaca gagattgagt tttgaataat
      121 gtaaatggaa ggtaggtgat aatttgtaat gctgtgagtg caattagtga gatagattca
      181 ttttctctga aaagaaatct gattgctatg caaaaagcac ctttatttct gatactggct
      241 gttcataatg tggtttgcaa tgcaccaagt ggcattttga tttggagctt taaagaattc
      301 tgggatgaat aaaacatgaa attaattgcc agagaagaac ctttgccaga ctagatgaga
      361 tctactgtgc tgaatagaag ctataactta tgacagggtc tgttccactc ccaaaggaaa
      421 ttatgtcaaa aggttaaaaa gcacttcaaa taatttgcag taccagtctt cctcttcata
      481 tgtggattga ttcatgtgtc ctatcatcct ccaccaggta ttagaacaga a
//
LOCUS       KCPA01002618            1000 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 288063tic ultra-conserved element locus
            uce-558, sequence.
ACCESSION   KCPA01002618
VERSION     KCPA01002618.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 1000)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1000)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1000
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="288063tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>1000
                     /note="ultra-conserved element locus uce-558"
BASE COUNT          345 a          168 c          160 g          327 t
ORIGIN      
        1 tatctacagc aagttactat gtgacaagtg ttccaaatat gacaagagct attatctgtg
       61 aaggaatcta taactcttta taccatctaa tattctttag catttcaagt aattagcagc
      121 ttattccaaa aacatttgaa cagttaacag atttgatacc tatggttaat cctcattaaa
      181 attacgatta catgatataa ttacatgtaa ataagaaaaa tgaattcaat ataactctta
      241 ctcttttcaa tgttgggcac tatgttggga atcatacagt atgtacaatt agatttatac
      301 tgctaagcta aaaatattgg tgaagatcta aaaatgacga acagtgcctt ttaaattaat
      361 gtcttattag ttgagtgaag tacactgaca aagaataatt tatgcttatt caaactgctc
      421 tcgacatctt caggtgtttc caaatgagct cacagaagag tgattaaatg catctgataa
      481 caagccacac attgctgaaa ttacttaccg cctcatttta tgattaatta aacatgtaga
      541 ttaaagttgc aaaagaattt agattaatga gcaagttaag tcttgctgat ataagtgaat
      601 tgggaattgg atgctctgtg gaactttata aacatgcatt ttataatgag taagacaagg
      661 ctacatgttg aatcctggcc acaagggcct ttgacgatgc agtctttttt aacatggttt
      721 gacagctttc aaataacatt ctactataga ctttaaactt tgtgcattgc tgtaaaacat
      781 gagactacat aactcatgta ttaggagtac gattatttca aagctctcca aggtaatgac
      841 cccctgtagc agcagctgct cagaaaaatt acaagctcga ttgttatttt aatcagagag
      901 aatttagtag ttaaaagcag ttacgcaact agtaaaatta tatgacactc catcagtagc
      961 cttatagcat ctttcatagt cctgtttctc ccaattcccc
//
LOCUS       KCPA01002619             465 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 288170tic ultra-conserved element locus
            uce-6098, sequence.
ACCESSION   KCPA01002619
VERSION     KCPA01002619.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 465)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 465)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="288170tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>465
                     /note="ultra-conserved element locus uce-6098"
BASE COUNT          122 a          122 c          104 g          117 t
ORIGIN      
        1 aaaacaaatc tcgtggacga tcacattaaa gtgaaattcc tttctacaca cccacaactt
       61 tagctctgtc tgctgcctgg gggtttttaa tcttgcaaag agaaaggggg gctccctgcg
      121 caaaattacg ccttctcctc tcatttgtta gctgattcca tcaaaaagtt cgctatttat
      181 aggctacaca cacgaacctg gagtaataca aaccctcccg tgttgttgcc ctcgcaaagt
      241 ggccggtcct gaagcatctg atcgggtttg tgtgtgtgcg cgcgagtaag agcgagccac
      301 gcagagagcg ctgccatcca aaaggggaaa gaagagctca agctgagaga cttattaatt
      361 gctaagagct gctctgccac cagccatgtg agtacctaac aatgatcacc ttttgcacag
      421 atggtcagcg atcaggcaca gacactttct gtcctttcct cctcc
//
LOCUS       KCPA01002620             367 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 288277tic ultra-conserved element locus
            uce-7131, sequence.
ACCESSION   KCPA01002620
VERSION     KCPA01002620.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 367)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 367)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="288277tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>367
                     /note="ultra-conserved element locus uce-7131"
BASE COUNT           97 a           74 c           61 g          135 t
ORIGIN      
        1 gagagattaa gaacgtaact ggtaggattt agttattttc gctctgtttc ttcttaatct
       61 gcagatttac atcaatgctg tatggcatgg ctgggccatt cctatgttct tatttttagc
      121 aattttgagg ttatccctaa attacctcat agccaggtat ttgcatacta gcttactgtc
      181 gtttgaaaga tgctttgtta ttcttgcacc cttttctaat actacattta acacagtgaa
      241 actcaaatat cctaagtgtc atcactcagt ttcttgatta ttgggaatta tcatgctctc
      301 agactccctc agcacactaa aattctgata ttacttgaag aacaagcttg ctgttttccc
      361 agcagag
//
LOCUS       KCPA01002621             825 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 288390tic ultra-conserved element locus
            uce-3224, sequence.
ACCESSION   KCPA01002621
VERSION     KCPA01002621.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 825)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 825)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..825
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="288390tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>825
                     /note="ultra-conserved element locus uce-3224"
BASE COUNT          227 a          154 c          160 g          284 t
ORIGIN      
        1 atgcatctcc tgactctatt gagctcacag aaatgggtta gttctttggg gtggctatct
       61 ggttgaaaat tgagcagtgt tgtgttttgc ttgctttgtg atgaatttcc ttaaaatcaa
      121 gagcagctga ttttaacagg tcttcctgat agcaacgtca gtgaacaatc agtcctgagc
      181 acattgacaa gccaaggctt ctactgataa ctttagttta gtttcacggt atttatatgt
      241 cgacagtttt aaaaatgtac ttagcttacc tagctgccat ttttaatatt ttccagtctt
      301 cttgaaaaaa gttattgatt tgacctccta cctaaaataa tgttctttag atctaaagct
      361 ggttagacac attatctgac tgagtttact gaagcaaaaa cattccataa ccttaacctt
      421 ttccctgacc ccctgctttt aacaactgcc gacatagttt tatgctgtta tgtgaccatg
      481 ctcggatgaa atctgtcaaa cagctccttg agttattagg ctgtctgagt ctgacctttc
      541 tgcaatcaaa gatatatgac ttaagggctc agatttgcca tggcaaccgg tccaatttgc
      601 tgccgtgaga aaaggtctaa ttgttgcaga aatttaatga tctagagcga catcagggct
      661 gtgagatttt atgaactgtt tacaccgtaa ttttcatttt gttaatgcag tctttttttg
      721 taacccattc atggctagag cataagtggc tgtttttatt taaaatagca gtgcacacta
      781 taaaagatgg ctcggtggaa atatgccact atttggaagc gtatt
//
LOCUS       KCPA01002622             724 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 288502tic ultra-conserved element locus
            uce-4584, sequence.
ACCESSION   KCPA01002622
VERSION     KCPA01002622.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 724)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 724)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..724
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="288502tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>724
                     /note="ultra-conserved element locus uce-4584"
BASE COUNT          261 a          127 c          107 g          229 t
ORIGIN      
        1 ctcagggata atgataactg acgcattcac agaaagaaat tctttaaagt tcagtaaaat
       61 ggataatata ttcatgtttt ggtatgttta ttaaatactt aacaatgtaa ctagcattgc
      121 tatctttttg catgtgccta gttaccattt taaacaacta caaaacaggg acatgtggaa
      181 gtgaagattt cctaagcatc ccaaagcaat atatgtgtgt gatatatgac atccttccat
      241 aaatcctaaa tttacacagt atgctaatgc ttgattccat aatttctttt aaaaatgatt
      301 ataccctgct gctaagagca aaggcatact aaaatcagtt ttctatgctt ttccaacaat
      361 gaaatgcaag ccagcacacc acataaccaa tacttaccat atgttagaag ataatccagt
      421 aggcttcaga cactgacatg atttgcttaa ataaaaatcc tgttttttaa ggcagtaaca
      481 acagcctacc atttttatta ttcctttagt gacctactac agaaacacta atattaaata
      541 taaatatttt tattgtaaat cagcctagtc tatttttatt gcctttaatg tgggatggca
      601 ctggcttagt tgctaggcta gaggaaaaag agctgccatt aaataattgg gttgttcgaa
      661 aaaattctca aaaccagaaa atattcatca gatcaaaaga aacctaaaga acagcttcaa
      721 gact
//
LOCUS       KCPA01002623             584 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 288614tic ultra-conserved element locus
            uce-2261, sequence.
ACCESSION   KCPA01002623
VERSION     KCPA01002623.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 584)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 584)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..584
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="288614tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>584
                     /note="ultra-conserved element locus uce-2261"
BASE COUNT          188 a          115 c          136 g          145 t
ORIGIN      
        1 aaggcaagaa caaaactttc ctagttaact tgagcatagg atccacctta agaaaggtcc
       61 aaggagcgag atggaaacca aatacagtca aaggaagttg gggatgtggg tgtcaggttg
      121 tcagtaatct gacagctgtg gtaactaccc tctaatccag cagctccagc cacgctctcg
      181 gctgacaccg caaggactga ctgacagctg aagagcgggc actttttaca ggcaaaagtg
      241 acatccagtc tattaaggct gacaagcaca aagcagagat ttgccctgaa tggtttggta
      301 ctgaagccta gtaaaggggt tatttgaaag gtcttagaga aagtgtcaga ctcaagctca
      361 gatgataaca atattgtaat gatagcactg gacaatgaag tgctatgatt gctcatacag
      421 gccaggaaga ttgcatgtgg atattgagct ccagaagcca gtttacagca gaagattctc
      481 aaagcaaact tagaatagct gtaaacacac tctatgtcag aaacttaaat ttttccagtg
      541 gataataatc tactcacgcc tttgttactt ttgatctagt gtct
//
LOCUS       KCPA01002624             473 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 288724tic ultra-conserved element locus
            uce-3509, sequence.
ACCESSION   KCPA01002624
VERSION     KCPA01002624.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 473)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 473)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="288724tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>473
                     /note="ultra-conserved element locus uce-3509"
BASE COUNT          157 a          110 c           84 g          122 t
ORIGIN      
        1 gcgactaatg aagttttcat tctctaaaac tacaaaataa tttacttcaa gtgttggaga
       61 aattctgctt tgacaaatga agaaaattta acacatcaat tcacgttcct ccacaaaatt
      121 ctctggatca catcagtttt tagcccccag aacaaagatg ataggaactt tttcacagtg
      181 actcagaagc actagtttcg ttagcagcct atctcctcct ctgaatgcac cgcatgtggt
      241 tccctgctgc aactctctat gctttgatag ccctgtacaa tgctgcttga actccatgcc
      301 acaaggcaac actgtaaaga agctgaaagc aaagagaaag agaatcatcc aaagagtcga
      361 attgctctgt agccactttt cacaacgaag gaaggttatc agtggcattt actccaactc
      421 gtgcaaaagt cctcggaata taagcaacaa aaacagcaca gcagtgctga aga
//
LOCUS       KCPA01002625             645 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 288832tic ultra-conserved element locus
            uce-3716, sequence.
ACCESSION   KCPA01002625
VERSION     KCPA01002625.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 645)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 645)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..645
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="288832tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>645
                     /note="ultra-conserved element locus uce-3716"
BASE COUNT          196 a          122 c          167 g          160 t
ORIGIN      
        1 gagatggagg cagaggagga cctgggggaa gaagagaaga gagtgaagat gttgaagggg
       61 gtgggggaag atgtggaaaa aacaaaacag ttccagggca gaggaaggga ggatggttcc
      121 gtttaattag gagggaacat gagcaaaagc tccaagagac acgcatgcac acaccctctg
      181 ttccacaccc tcacccccca gagaaaaaaa attcatcaca ccgatttttt catggtctgg
      241 cagtcaagtg ataaaattat cagatgaggg tcccattctc ctttcctgca gtcactttcg
      301 ccaagtgcac cacgtctgaa ataatgaagc agatttgatt aaattttcgc tggctgaagc
      361 agccacgcta atttggagat gggcttatta gtttaatgac cgatccgaat aatcagaatt
      421 cattagcatt agtgccacta ttgtcagctc aacattagcc ctgggctcca gtagatgcat
      481 ggttatatat ttatatagag ggaggctgtg tttataaagg gtaaaatgga gaggaaaact
      541 atatgttgca ttttatactt cctgcatatc cttgtccatt agcaatccac tgaacgagga
      601 ataaagcaag gctttgtgag agggtcatgt tgctgtgccc tgggc
//
LOCUS       KCPA01002626             728 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 288939tic ultra-conserved element locus
            uce-1556, sequence.
ACCESSION   KCPA01002626
VERSION     KCPA01002626.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 728)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 728)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..728
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="288939tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>728
                     /note="ultra-conserved element locus uce-1556"
BASE COUNT          227 a          152 c          126 g          223 t
ORIGIN      
        1 aagtcagagc aacctttaaa ataataagac aaatcaattt atttcacaaa tgtctttatt
       61 tccaaatgcc attgtttggt actttctgct gtcattgccc atgacatttg agaaaacttg
      121 tctcttagtc atttaggtgc agcagaaatt atcatgtaac agccatgtga aaagattata
      181 cattcacctc agtgcagatc tgctgtaaca accttgtcct atggggtaaa gagtgtttag
      241 gaggcggggg aaggcaagaa agacaagttt taaatatgga cagaaaagcc ctactttatt
      301 gctatataca atgaaaagta attatagaga aaaatgaaag ctgcttcttg ctgttagcag
      361 gaagaataag ggaattctgt tcctttttaa agcttggagt ccattttgat ataattggtt
      421 ccagaattat ttatgacatt aattgctgca ttatcgactg cctgtcagct cttctggcag
      481 ttagtccatc tttcttacca cagaaagcca gctcagccca aactagactg acaagctaat
      541 tatacccatc ttccccttca atgacaaatg ctgctcatcg gaaacctttc tagaaataag
      601 ctttcattct ttcccctttt tcctgagcca gacacaacca atatctcaag gtacagatca
      661 cagctgaaac tctgctcaca gggctattag ctctgaacat ctcacttgag cccatcttat
      721 gttatcaa
//
LOCUS       KCPA01002627             714 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 289049tic ultra-conserved element locus
            uce-6558, sequence.
ACCESSION   KCPA01002627
VERSION     KCPA01002627.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 714)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 714)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..714
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="289049tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>714
                     /note="ultra-conserved element locus uce-6558"
BASE COUNT          241 a          128 c          127 g          218 t
ORIGIN      
        1 aaaagggtga catcacacac agacctcagc tattaccccc tgaatgctgc atcactgaaa
       61 caatccagtg acaaatcttg ttctgaaagc cacccatgag caggacgagg ccacttagga
      121 gtttctgttc agagcgaaca gggaagtcac agccctccag cctgtattat ttcttttctt
      181 agaatctggg aaggagccag agattctaaa caaagataag gtgtaaagaa gtggacacga
      241 cattaaaaaa ataaaatcca tatcagggca ataatggtca taaagcaata aagtggatgt
      301 ataatagttc ctggactttt aatttgtgac taatttgttg cacaatgagg ttgcaatttt
      361 ctaattgtga ttgccatttt aattttactc atggctgtgc aactaacaat gtatagtcta
      421 gtaattaaaa ttaattgtac cttcacctgc atatttctat taggctgtta aatttagtca
      481 gtaggctcaa tgattttgtt ctctaagaga tgctgaattc atttcagtga gcccaattat
      541 gttacactct gtaattcctg tatgaaaaac aagcatttta ctttaatatg aggaattgct
      601 acaatcccat ttttaaaatt gcatattcaa caccagaata caggctgaca agagatacaa
      661 gggcatttta aaaataacct gcttgtgaga tatcttttac aaaactagta atta
//
LOCUS       KCPA01002628             659 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 289157tic ultra-conserved element locus
            uce-7208, sequence.
ACCESSION   KCPA01002628
VERSION     KCPA01002628.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 659)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 659)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..659
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="289157tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>659
                     /note="ultra-conserved element locus uce-7208"
BASE COUNT          210 a          108 c          116 g          225 t
ORIGIN      
        1 gattgattac tcaaaaatcc tttcaagagg agggaaaagc tctgttcaag cttcactccc
       61 taaagattta gcttctgtgg tgaaaaacct cacattcagt tacattgagt ggtcactcaa
      121 tttgtttatg cattaaatag tcaaatatat tcttttcagt gtatatgaat agttcaattt
      181 attctgctga aagagagata actatcacaa atagcaatag aagtaacata atgagataag
      241 aatactagaa attttagtac agtccattat tcattcaatt cctggcagcc tttatgatta
      301 caaatcactt gattgactaa ctagaaaagt gaattatgaa tcaggttcat ttttcctggt
      361 tgagagttgg tacatgttgt aactcttcca ctttgtgata tatcaagctc ttgtaacagt
      421 aataagagat ataatcaact ctttatttca ggacaaataa attggctttt caaaaatgaa
      481 atgtggttgc taacatttta acagtgtgca atgtaattcc ttcctgctat tctcagagtg
      541 caatctgctg tgatgacaca gcttttgaat atttgacttt gctgaaattc ttttaggagc
      601 ctcagaccct cagtccaggc atactgatct cagtggaaat ttggtgttgg gtctaagag
//
LOCUS       KCPA01002629             342 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 289257tic ultra-conserved element locus
            uce-7449, sequence.
ACCESSION   KCPA01002629
VERSION     KCPA01002629.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 342)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 342)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="289257tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>342
                     /note="ultra-conserved element locus uce-7449"
BASE COUNT           84 a           75 c           90 g           93 t
ORIGIN      
        1 ggtggaggga tggggccggg tgcctgcgat tggtaaagct ccacgaaggc atctgccagc
       61 aggacttcag aggaatgtga aaccaaatca tttagaagtt aaagatagac gcagaataca
      121 cagcatcttt ttaaattcat ccctctgtca gcttgcctct gtctcctcta tagtattccc
      181 taacatcatt ctggatactt aggaattact gaggtggcaa aagagatcat ggtgcataca
      241 gtggggtaag taggaagccc tctgcatgca tttgctaggg tggttcctct gggctttcct
      301 gctgccttca gagcactctc ctctaggatg aggtggatgc tt
//
LOCUS       KCPA01002630             406 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 289360tic ultra-conserved element locus
            uce-3020, sequence.
ACCESSION   KCPA01002630
VERSION     KCPA01002630.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 406)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 406)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="289360tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>406
                     /note="ultra-conserved element locus uce-3020"
BASE COUNT          114 a          107 c           83 g          102 t
ORIGIN      
        1 caaacaaaca aacaaacaaa caagcacaaa acaggggagg aaatgaaaaa tagcagtcta
       61 cctttcaaat ctgagtgttg cctgcaggca cgctctgcag tggtcagctt cagcctcttg
      121 tatattgcca cttcccatgc tgggaagatt cttgtcatcc ctcacatatt ttatgcgcag
      181 aaaaggctgc cctgccctgt acttggtgat tgaggctgtg cccctggtgt gccacactat
      241 cagtggttcc caaggctgcc tagcctggga aaagctgcat ggaaacagtc caaaatcagc
      301 attacatgca ttattgttct tactctctct gattagagtg cacacaatga aaacaacagc
      361 aacagcctcg ttttctagct ctcctcccaa cacagggctg ttctta
//
LOCUS       KCPA01002631             535 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 289467tic ultra-conserved element locus
            uce-788, sequence.
ACCESSION   KCPA01002631
VERSION     KCPA01002631.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 535)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 535)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="289467tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>535
                     /note="ultra-conserved element locus uce-788"
BASE COUNT          163 a           81 c           89 g          202 t
ORIGIN      
        1 ccactcaaat agtaaaactg tctgattttc atatatggct ctgaagactt taaatacatt
       61 tactggcaag ctactgtagt agacacatgg tgtcagcttt taattgtaac tgtcttgcag
      121 agtggtgttg ttttaatatc ctgtatagat ttttatgtaa tacacttact tgcaggcagc
      181 ctgaagcaag aatcaattct gtgaaggatt cttcttttgt taaaagccaa tcttgtttta
      241 atgatgcatg aagaaatatt cgagcattga catttttctg tcaggtttct tttgaaaaat
      301 caattaagat aatactgctt tgacctagtt atctagttaa tgcttattag gaatgtaata
      361 tgatttactg tcagcataat aatttttgta tcttatccca ttagcttgtg catatttcaa
      421 agtgtattac acaatggtca cttcttaaaa tgtaatgtag cagaatacat taattagatt
      481 gactgggatc attagacaga aactctccca ttggctcttt gtatcaaatt tgtat
//
LOCUS       KCPA01002632             647 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 289575tic ultra-conserved element locus
            uce-7804, sequence.
ACCESSION   KCPA01002632
VERSION     KCPA01002632.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 647)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 647)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..647
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="289575tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>647
                     /note="ultra-conserved element locus uce-7804"
BASE COUNT          199 a          116 c          130 g          202 t
ORIGIN      
        1 gagagaaaga aagaacaatg tgcaatcggt gctgcattag agatggaaaa agtacttaaa
       61 gcctgcaaca ttcatcaagg ctgaatacat aaatgccaca ttttgaataa gccaagcaaa
      121 agacaatgac aaaggaaagg cgcgttgctt caggaatctc tatcattttc atttgctgct
      181 gtcaggaacc tgttttttgc ctctcactct atcagccatt atagcattaa tgaagtaacc
      241 tcacatagtt attgactggc ttgtcagagt ccctgcctga tcccttaata gaaaccattg
      301 gtcttcagtt aaaaatgggg tgagctggga ggtgctgtgg gcatgtgctg aatttcaagt
      361 gcactcctga ggttatcaaa agccatgaaa tgcaaattat tatatttttt aaacacacag
      421 atttcatgca actgagcata taaaattgac taatactgta ctttatgcat tcctaataat
      481 gtttccaaat atgctctgca tatgatcttt ccccagaaag ttgtgggtgg tatttgaata
      541 agcagaaatg ggcctagttt tattttgtga ataaagtagt ttcctggatg ttgcgagtct
      601 ctgttccttc taatataagg taatgtttat gcactgtctg ttcaaac
//
LOCUS       KCPA01002633             806 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 289686tic ultra-conserved element locus
            uce-7322, sequence.
ACCESSION   KCPA01002633
VERSION     KCPA01002633.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 806)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 806)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..806
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="289686tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>806
                     /note="ultra-conserved element locus uce-7322"
BASE COUNT          243 a          142 c          169 g          252 t
ORIGIN      
        1 aaaacacaga aaatctgatt atcataacac gttgcacagt gagaggcaga cctcacataa
       61 tgtaaaatca atccacctaa atctctttgt agcctgagct atttctgaga tgggcaataa
      121 agctttagtg tgagaaagag tgagctctgt gtgtgaatat gcattgccga ataacctgcc
      181 tctttcgggt ggaatggtta attctctaat gcacgtgtat catctaagcc ccttttaaaa
      241 agttttgggt tttcatgtat atgattaaaa ttgtggtttg cagtgccaga gccaatttct
      301 tgttctggag gtgagtctgc agcttgctgt gctgcaaatg tcaccagcaa gacgtttgtt
      361 agggctgcac tgcatgccgg ttaatctgtt tacttatgca atggtggaaa tgtgacctgg
      421 ctattgtggt gattaacaga gtcaaatatc ctcacattaa ctagtgagct gggcaatcag
      481 gctggattat tgttacattc aatttaaatt acagtggcat gacaggtcct gaggtattta
      541 gtaacggatt tcacagcaca gatatgcttc atgtgtaatg aataaactct ggagagcaga
      601 aaagggaaaa aaataaaata aaaaggtatt ttatgatcat tgtgaaaaat ttatggagtg
      661 tagctggcat gaaattctat aaaatgaact ggctccaacc agtcccactt ctcttcctgc
      721 tgcttatgaa ttattattac caagtcctcc tatgtttact cattagcatt gaaccctttg
      781 caaaactgtg attcaaaatt gaattc
//
LOCUS       KCPA01002634             511 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 289791tic ultra-conserved element locus
            uce-6223, sequence.
ACCESSION   KCPA01002634
VERSION     KCPA01002634.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 511)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 511)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="289791tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>511
                     /note="ultra-conserved element locus uce-6223"
BASE COUNT          155 a          112 c           84 g          160 t
ORIGIN      
        1 cagtgtgata tatatgtaca acataataaa cccctcccta aagaagcaac tgtatatcca
       61 aagggataca gaatcagaat tgtaaaaatc atagtgaagt ttgcttgatg taaagcctga
      121 gattttcagt tggttcttct gcaaggctgc aacacctgcc agatatgtta aactctaatt
      181 ttttgtttct ttttctcatt tttgctacag tctttagact aagcatgcaa gacatacaac
      241 taagtgcaac tgagtgaaat gtatttttta tttactcatt ccctaacagt ttggactgag
      301 gtatgcgtac taacagtttc tcatgctgtt atctttactc atgtctagct acacatgctg
      361 agaatgaact aatctaccag atttttatcc cccttctgaa taccgaacta accagcaaac
      421 cactcagttt tgaagcacag ggctcaattc tcaccctgtc tggctaccgc cggcacgtca
      481 cgaagctgcc tggatataat ttaaaccaaa a
//
LOCUS       KCPA01002635             653 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 289898tic ultra-conserved element locus
            uce-7207, sequence.
ACCESSION   KCPA01002635
VERSION     KCPA01002635.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 653)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 653)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..653
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="289898tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>653
                     /note="ultra-conserved element locus uce-7207"
BASE COUNT          189 a          134 c          128 g          202 t
ORIGIN      
        1 atgtcattgt gcatccctgg tgggttcttt gaagtcccaa gattttgggg tttgtcacca
       61 cccaggtatg gaagcagacg ctgctgtctc tcaccgtcta atcaagataa taattacagg
      121 cagtggatct ggagctaaga agaggaaaaa ggcttttcaa tcactgcctc tgcatttcaa
      181 tcgaagcccc atgctgtaca acactggaga acaaggtgta aatcagctta agaacatagt
      241 tctgcattca atgcgttgtg gtttacagct cccaaatgac cttcatctat cttccttagc
      301 tgtagaggta tataattgaa ctaaagagag gcttgaataa tgaggttgag agcagcatct
      361 ccgatgctgt tgcttaatag tgtaccagcc ttgcactttg ttttctgata tgttacaaaa
      421 tactgtagtg ggtccaattc ttcagggtga cacttggtga taaccccttt tttaaaatag
      481 aaaagagaag aggttttgcc tcctataaat ctttggctgc aactagactc ccaaaaatac
      541 aattatatga accattttct attcaatatc tgcccacaaa agctcagaga gacaaatagc
      601 aattatctgc tctcctttca gtcatggaat ttattttttt aacctgtcat ctt
//
LOCUS       KCPA01002636             573 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 290007tic ultra-conserved element locus
            uce-4113, sequence.
ACCESSION   KCPA01002636
VERSION     KCPA01002636.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 573)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 573)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="290007tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>573
                     /note="ultra-conserved element locus uce-4113"
BASE COUNT          160 a           84 c          117 g          212 t
ORIGIN      
        1 actttgacct ttttgatatg gttaatatac acacgaaatc ctagctaaat ggaactaatc
       61 tttgctgacg ttctcatagc tctcacaaaa gagaagtgtc ttttttttcc tttaagagga
      121 ttgaaactca agaatgtttc atatcaggag ttcttgtgtc ctacaataaa ggtttttttc
      181 tattaaaggt gaggttttca atatacaaaa atgagctaat gatgcttcag atgatatatg
      241 taatgtattc tttttatttt atgtgtagat ggctcttgga caagtccgag cagtacaaca
      301 cactgggagg gaatgccctc tccttttaaa ggcaggaatt tttatttatt acctgtgttt
      361 agtatgtaaa catgacataa actagtggat ctttctggat tgacacaaat atttcttgga
      421 atatgtggct gagtttttgc tgcacataaa ttatggtggc tcacctttat tttggggtgg
      481 aagcatctga agtttatctt ttcagatata ggttcatgat gccttttatg tctgctgtac
      541 agaaaggatt tggacggtag tgatgtagtt gct
//
LOCUS       KCPA01002637             686 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 290118tic ultra-conserved element locus
            uce-6591, sequence.
ACCESSION   KCPA01002637
VERSION     KCPA01002637.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 686)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 686)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..686
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="290118tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>686
                     /note="ultra-conserved element locus uce-6591"
BASE COUNT          212 a           88 c          114 g          272 t
ORIGIN      
        1 gaaccaaatg ttctaggttc atgttttatt gcattaagtc gtgtgtatgt gaagtgtcct
       61 ttgaccagaa ggttatcagt atatttttat aaatttgaaa ttcattgtgt ttttcattat
      121 tagggtatat gtgctagatt tgaaacttaa catttttagg cacagatgga aaaagttatt
      181 ggctccttga aaacataggg gacaaaatgg atcctcaaag catgtatgta cttacaaacc
      241 aagctgtaga gatcaagaaa agaactttat tgttgatctc aagatttcta aattgtcaag
      301 atttatatgg agttgtggtg gaactagtta acacttagag cttttggtat gtaatgacta
      361 tttgctatgg actgatatta aatgtttcaa aggattgcgt tcttaaactt tctggatttt
      421 tgttactctc ctcagatatt aagaaaattt ctttgctata ttacattaaa aacataagaa
      481 ctttgggtct cgtatttatt ttcacttgtt ttactaatta tttacagaac accgttttaa
      541 cttttttatt ttataaatgt gtagtatttt aaacatatct ttaaaaattg ttcaattgga
      601 actacattaa cttctgattt gtttttatta ggaaatacac tttttccatg ttggtgcaca
      661 gcacttaaca gaaatgtttg tattcc
//
LOCUS       KCPA01002638             526 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 290228tic ultra-conserved element locus
            uce-6800, sequence.
ACCESSION   KCPA01002638
VERSION     KCPA01002638.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 526)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 526)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..526
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="290228tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>526
                     /note="ultra-conserved element locus uce-6800"
BASE COUNT          148 a           80 c           93 g          205 t
ORIGIN      
        1 gagccatagt tcatctttgt agttagtatg ttgagatttt atttgtagag attgtttagt
       61 cattatgata aaacatatta taaaaatttt gataatgaag agttaaaaag ctcttagtgt
      121 tttcttttta taagccacct gttgccttag atgcgtaagt atatgaattc gaacaaagtg
      181 ctcatcactt gtcagccatc agtggcagca taaaaattac ttgtggtgct tgctttgcaa
      241 gaagttcttt tgtgtttgtg acatcagctt tgttttatac aattaaagta ttacacgcta
      301 gaataatcta aattgcaacc actaaatggt gatgtagttc ttttttcata gagctgaatt
      361 tgtttactgg ttgtatacag ctattgacta ctgtttaaca tgacatgtcc cttttgccta
      421 gaacaatctt tggaaaaggt ggttttttgt gtcctgttct tgtctcccac ctttctccat
      481 tatggagagc ttttctcgta cttttttaac aagtagataa aaatac
//
LOCUS       KCPA01002639             575 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 290340tic ultra-conserved element locus
            uce-5642, sequence.
ACCESSION   KCPA01002639
VERSION     KCPA01002639.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 575)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 575)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="290340tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>575
                     /note="ultra-conserved element locus uce-5642"
BASE COUNT          171 a           98 c          112 g          194 t
ORIGIN      
        1 ttttgtaaaa tctaggactt catttcctga atgctcttac tagttctagc tttgtttatt
       61 ttggccttag gttgcattag ataattagtt tttatttaag agaggagtct tatgttgcaa
      121 caaacagtac taaatttgag tcttaaaaga cgccatactc cagccataac attttaaagc
      181 aacatttgtg tctgtctcta aggtttatgg aaagctcaga agcttacttg attatttttt
      241 cttgattcca gggctttttc cgcaggagta tccagaagaa catggtttac acatgtcaca
      301 gagataaaaa ctgtgttatc aataaagtta ccagaaatcg ctgccagtac tgcagactac
      361 agaagtgctt tgaagtggga atgtccaaag aatgtaagtt aaacaattta ttgtttgtca
      421 tatccacata tatgtggcag ttatgcaatt atgtaattga agccagggga aaggagcatg
      481 aatttgattt agacctgtat tctgagtcct taactctgca gcctaaaagc tctgtgtttt
      541 tctgcctgga ccctctctga aaggtgaaac aagct
//
LOCUS       KCPA01002640             690 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 290451tic ultra-conserved element locus
            uce-1750, sequence.
ACCESSION   KCPA01002640
VERSION     KCPA01002640.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 690)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 690)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..690
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="290451tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>690
                     /note="ultra-conserved element locus uce-1750"
BASE COUNT          203 a          158 c          136 g          193 t
ORIGIN      
        1 tgaatccccc aaattaccat aagccttgtt ctttaagttc aggctaatga gtcccatttt
       61 attcatattt ttgaacgggt ctgatagtct ctttgtttat tcatcaccaa agtctatata
      121 atttcctgcg ttgtttattt acaatctctc cagcaatatt tatttagggc cttggcagga
      181 gaggaggaga gcagctctcc tgcattcctc ccgtcccatc tcagcccatg gagctctttt
      241 gacagacagc ataaaaaaaa tctgcataag gaaaagtaac tgacagctgg ggtcagactc
      301 tctctgttta atgacactgc cagttacaca ttttgaattg tttaaatatg agtctacagc
      361 ttcaacgatc atcatctcac tggttccact tttcataccc aacagccagg aaagtgacac
      421 gtaattacac acttactgat ggtatcgccg gggccgataa ttaaaactgc cacgggagga
      481 ttgctattgc gaggctacag ctgggatgtt gtcaagaggt agaaactcca gcagctctta
      541 acgctatctt cttacaggtg gacggtgaag gaacagaaag gcctcagcac atcattcaca
      601 atgtctcgca caaatgaaga aaatctatta acaatccaat aagtgaaata caaacacgct
      661 gacccaaggg ttaaactgtc tgcgtggacg
//
LOCUS       KCPA01002641             533 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 290557tic ultra-conserved element locus
            uce-6043, sequence.
ACCESSION   KCPA01002641
VERSION     KCPA01002641.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 533)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 533)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..533
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="290557tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>533
                     /note="ultra-conserved element locus uce-6043"
BASE COUNT          160 a           99 c          111 g          163 t
ORIGIN      
        1 aagaatgaaa tagaacatgc tttaattcga acccagtaac agaactacta catctgatca
       61 gaaagtgtgt taatatatgt gcagcgtgtg tatataagca gtcttttctt taaccagtta
      121 gctggagagt tcattagatt ccctatgagg tgcaaaagag gggaaggaag ccagtgtgga
      181 gttattcatt gtcttatgac tcaattctaa tcacttcagt cagtgtgact gacagagaaa
      241 tgctttccac tgtgattgag agtattgatt tcttagcccc ttttggggca tgctggagag
      301 acacaatcag agccttcact ttcaaaaaac ctcttcatct gccttaatca tctgatcgat
      361 aatcagcatc agtgctgggg atcttcaaca aagccttctc cggtgtcttt attttctttc
      421 caccattggg ctacaaatct gctgagtcaa ggtgattgta atagatcaaa aaagtgaaca
      481 gtaagcaaca atagtgacag cttttagtga tgcttgttag gcatataaag ttc
//
LOCUS       KCPA01002642             596 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 290669tic ultra-conserved element locus
            uce-5599, sequence.
ACCESSION   KCPA01002642
VERSION     KCPA01002642.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 596)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 596)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..596
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="290669tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>596
                     /note="ultra-conserved element locus uce-5599"
BASE COUNT          205 a          118 c           93 g          180 t
ORIGIN      
        1 acccaatgtt ctagtaaaga actgaccttg aaccgtgaaa caagtcactc ttacaccagc
       61 ggtcttctcc tgtccaaatc aaaagagagc aagaagcact cacgcatagt gcctgcgcac
      121 ttctgacact gagacagctt aagttcatgc acatttttat tgagtagtaa tataaaatgc
      181 ttctttcatt gttacaagtg catgctttga ttgccaacat ttcgaagtca aattacaaag
      241 gcaaggctgt aggctgtagt gaattacttg ggcacttata caattgttaa aaaatatcaa
      301 tggactgttt gttttgtttc cttttctttt ttagaatgaa ccagttgaaa cccgtaactg
      361 atatacaaag ggaaaaaagt gaaaaaatta cacatttcgt ggcacatgac aaaacagaac
      421 aaaatgacta aaccattatg acattaacag ttatcatgca tttagaattt cacatgtaac
      481 tacaaactta tttaaatttc acaaggtttg ctaaacatgc tacccatcta tatgtgcact
      541 gacaagctta tgttaaaaac tttaagaata ctctcccccc ttagattttt caaagc
//
LOCUS       KCPA01002643             654 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 290782tic ultra-conserved element locus
            uce-6684, sequence.
ACCESSION   KCPA01002643
VERSION     KCPA01002643.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 654)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 654)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..654
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="290782tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>654
                     /note="ultra-conserved element locus uce-6684"
BASE COUNT          144 a          153 c          153 g          204 t
ORIGIN      
        1 aacctgcaat tctgggcagt ggtgggctgc caaatggata tagtttatct tttagaggga
       61 agatggatac catttgctga gataggtgtt tgtttcccag gaaacccagt gtatttacag
      121 cagctctgca aggtgtgtgt gtgcatgtac atgcttgtgt atgcctttat ttccattctc
      181 cggctgcctg cctctgattt aagggcaggt tttattcccc agctgcctca gggctcctct
      241 tttctgattg cattaaagtc tctgtaattc tcccctcatt aatgattggc atatttttac
      301 ctctcactaa aggagcttgg aggcaactcc cgtggggccc tgctcgccaa atgaaacaat
      361 ttcatcctgc tccagaaacg cattaaaaag ggtttgtcag gatcttatcg ctagttaggg
      421 aaagctaatc aaattacttc tatttattag ctgctgcagc aatgtgtcat tccatcaagt
      481 acaggtagtg ggacaggcag ggattgcgtg gtgagctctg tgcatgcagc gctgctgcct
      541 tgatctgcac aacagcatct cttgccataa gagaagctgt gaacttccca gtggcagtgc
      601 ttcgggacct ctcatctgct gcccctcttt gttcatcctt tgtagtagca ttcc
//
LOCUS       KCPA01002644             574 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 290893tic ultra-conserved element locus
            uce-7484, sequence.
ACCESSION   KCPA01002644
VERSION     KCPA01002644.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 574)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 574)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..574
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="290893tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>574
                     /note="ultra-conserved element locus uce-7484"
BASE COUNT          151 a          113 c          128 g          182 t
ORIGIN      
        1 tctcggcatc tgatgctttt atgtgtttct ttgtaagttt ccctgctgca attcactgag
       61 tggtacacag tgctctgagc tcctgcctgc acaataactg gttttaaaca tttctgttta
      121 atcaagagtg aattagatgt cagagattca atgttctaga tcagcagttt ccaacactga
      181 tacatcttaa tcaagtaatt aggtgccttg ttattgtttg gtgttttcca agctggagaa
      241 gggaacagat tttttgcttt gctctgatga ctgctagcag cagtgtttgt tgttaacaga
      301 gacatgtaca cctaaccacc agttggcagg tgttaacact ttgttactcg ctattcccac
      361 atgctgagga ttgtgggaaa gctgtcaagc tctctgtctt atgcactcag cttttacaat
      421 caacatcaac aagctctgaa caaattcaga agctctgtag caatgcagcg atgcagcact
      481 agcaagggaa acaataggac cagctttgat gggatctgag gaaagtttat ttccttaact
      541 tggcttggaa gcaagtagat ggaggctgag tgct
//
LOCUS       KCPA01002645             654 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 291001tic ultra-conserved element locus
            uce-3410, sequence.
ACCESSION   KCPA01002645
VERSION     KCPA01002645.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 654)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 654)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..654
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="291001tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>654
                     /note="ultra-conserved element locus uce-3410"
BASE COUNT          209 a          128 c          113 g          204 t
ORIGIN      
        1 gctctccagt taccctgcaa tttcttttca agaacggttt ctatcatctt gtttcaacac
       61 ccactgaata agaaagttta actttgtatc ttgctcaaaa tcatcccagc atgtttatgg
      121 aataaaagaa cactgtacat tttatggtgc aaaaatcaaa ggttgctctt cctgctactg
      181 gttttactca gcagtaaaga gaaaaccttg caagtgttgt ttacacagta ctaaatcctt
      241 gtaaagtcat actgaaacaa gactgctatc tgacctagcc cttagggcta cttaaacacc
      301 tgtggattta tagagttcag atgtctacaa ggtctgtgct gaagttcatt tccaaacctg
      361 tgcctcatgt gaagtcgttt gttggcacag ttaagccact actacttgtt tctggtttgt
      421 aaggcaatca catcatgaag tagaaagagt tcagaattaa ggtaacttac ctttatacac
      481 atgcaaatgt acataacagc taaaagctca acatttttta ttttcagaag ctttaagatc
      541 aaaacaatgc agggaaagag aggagttatc ctcatcaaat gaattttcca gcaggaccta
      601 tacatgtaaa atacgtatca gaccatcaag ttaaagtaga gtatgctttg ttct
//
LOCUS       KCPA01002646             849 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 291111tic ultra-conserved element locus
            uce-1783, sequence.
ACCESSION   KCPA01002646
VERSION     KCPA01002646.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 849)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 849)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..849
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="291111tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>849
                     /note="ultra-conserved element locus uce-1783"
BASE COUNT          274 a          168 c          154 g          253 t
ORIGIN      
        1 ccccagctat caaaagaaag gaaatccata tattgtgcta gtgacaaaac aatatgcagt
       61 catttcagag ggtctcttta ttagaaagaa acatacttta attagaagaa atatgttaat
      121 ttcaatagca tattcttcat atctctgccc ctcacaccta cattcttttt atggacagta
      181 caaaggagga taatagatgc ctataaaagt aactagtgaa attctgcatt aggataatct
      241 gtcacccatt tccatttttt ctgaagaaag caagcataat caaaagccta aatgacaaag
      301 agttgacagt aagattctgt agtaaatgat tccagagtcg ctggcctgcg gagatgctga
      361 agaagtcccc agcagacctg attaattcca gtttctccag ctgccagggg agcagaggct
      421 aagcagtttc acagagagga gcctattacc actactaggc tgaaatagat ctaatcaact
      481 cacagccgct caaaagaaaa ctttacaggt ttagctcact aaggcagcgc tttaaaatga
      541 tgactacaaa ggatcatggg agtctgaaag catttagtct ttattgcagc tcaaggaaat
      601 tttctgctgt ggttaggcca tgctaattta ctgaacatga caatgcctcc cagattgtat
      661 gacatcattt caataatggc tcttgtcctc ttagttaaat atttctacta ctacgaattc
      721 tgaatacttc atttattgga ttgccatcta tcttaggatt aattaagttt accactccaa
      781 aactatgggt agcctgcttt atcattcagt ttgaatgatg atgctgcata atttgccatg
      841 gcactgtca
//
LOCUS       KCPA01002647             875 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 291223tic ultra-conserved element locus
            uce-246, sequence.
ACCESSION   KCPA01002647
VERSION     KCPA01002647.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 875)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 875)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..875
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="291223tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>875
                     /note="ultra-conserved element locus uce-246"
BASE COUNT          220 a          239 c          189 g          227 t
ORIGIN      
        1 agggtgtttc attgtacata cctaggaaac agaacatatg ggagggaaca atgaaaggca
       61 gttggtagtg tagctgagaa agcagatccc tgacactatt tcgtaatgga tcctctctca
      121 cccttaagtg aactgaaaat ggtgcattgt gtcattaaaa tgtactaatc ttttctcttt
      181 tccatcccag gaggtgaatt agttatccct ctacttgtag aagacccttt agatatccct
      241 cctattgcta ctcgtgcacc tttcattaca cttcccccta cctttcgccc cctcctcacc
      301 attattgaga ccaccaaaga ttccctgtcc atgacctctg aggcggggtt accttgcttg
      361 tcggaccaag gcagcgatgg ttgtgatgat gatggcttgg tgatatctgg gtatggctca
      421 ggggaaacat ttgactctaa cctaccccct actgatgatg aagattttta caccaccttc
      481 tccttggtaa cagataagag tctttccact tcaatcttcg aaggtggcta caaagcacac
      541 gcacccaagt gggaatccaa ggactttaga cctaacaaag tctccgaaac tggtaggact
      601 actaccacgt ctttgtcccc tgagctgatc cgctccacag cttcgtcctc gactgtgatg
      661 gttcccaaat tgccagccgg caaaatgaat aaccgtgagc tcaaacccca gcctgacata
      721 gtcttgcttc cgttgcccac tgcctatgag ctagacagca caaagctgaa gagcccgcta
      781 atcacttccc ccatgttccg taatgtgccc acagcaaacc ccacggagcc gggaatcaga
      841 cgggttccgg gggcctcaga ggtggtccgt gagtc
//
LOCUS       KCPA01002648             388 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 291332tic ultra-conserved element locus
            uce-7489, sequence.
ACCESSION   KCPA01002648
VERSION     KCPA01002648.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 388)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 388)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="291332tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>388
                     /note="ultra-conserved element locus uce-7489"
BASE COUNT          128 a           67 c           69 g          124 t
ORIGIN      
        1 tagttattgc tggcttgcca gagatcttga acttgagaaa ggttagacat cacaatgctg
       61 aagcagtttg tgagcatcag cagatttagc ttgtaatttc attgatctat gtgggcttgc
      121 tgtttgcaaa ccagctgctg cactgtttcc ccacagctac tgatctgagt agcattgatt
      181 ttttccctta cattaacata gcattacttc tttaatgggc attaaatgac tggatgtaaa
      241 tacaaacagg gtttcaacaa caaaagagaa aaaaagcatt agttcaaagg actctattaa
      301 taaaaaaatt aaaagcatga gttattgatc aacataaatg ctattttcca agaaataatt
      361 tcctcactgt gtttccaaaa tgttgcat
//
LOCUS       KCPA01002649             645 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 291439tic ultra-conserved element locus
            uce-5297, sequence.
ACCESSION   KCPA01002649
VERSION     KCPA01002649.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 645)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 645)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..645
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="291439tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>645
                     /note="ultra-conserved element locus uce-5297"
BASE COUNT          154 a          135 c          123 g          233 t
ORIGIN      
        1 ctctgcacta acattatact ttgatttatt ctaacctgcc tcatacagcc acttttcttg
       61 cattcagtcc aggtgcaagt tgaaactgat aagagctggc agtgtttgtt ttattgtgaa
      121 ccttattcag cctgatattt agttatgttt ccacgtgggt ttgtaatgtg gttttatttt
      181 actcctatga ttagtttctg tttgttctaa tttctttttg actctttctt gaccttgagg
      241 tgaaaaaaca cagaagatgt attccctcaa tttaatgcca gtctgaggtg tttctcctgc
      301 atcatcagat caatgaaaag taaatagcct acatttcttg tttcacagtg cagtattgat
      361 ctttcttcag cttttgcttt cttttttccc tgcgtcttgt gtctttcaac ccctgggacc
      421 aaagtgattg ccatagattg gacaagctaa caagcgcatg ataaggaact ggtgttttgt
      481 ggtatactca cattctcacg cctggtatat aaagcctgga cctctccgca tttaaagaga
      541 ggtgccattt tgtgtatggc acaagtcact atgaaaggca ccggagcagc agaggatttt
      601 attctccact ccaatctttt attcctacag ctggtgccaa gctgg
//
LOCUS       KCPA01002650             693 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 291546tic ultra-conserved element locus
            uce-1941, sequence.
ACCESSION   KCPA01002650
VERSION     KCPA01002650.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 693)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 693)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="291546tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>693
                     /note="ultra-conserved element locus uce-1941"
BASE COUNT          221 a          123 c          126 g          223 t
ORIGIN      
        1 cagtgttaga gcttttgctg aaggtttacg agtctgtgta aacagcacgt ctgccataag
       61 gagcagtgaa gtctgtagaa tccttgtcta aaactgtcct ggcattaaag tttgctgtgc
      121 aaatatcaca taataccaga gacagctgaa atctcctatt taggaattta tggaacttat
      181 atgtttgcag gcgtcagaaa gtccttttta tacagcccca ctgcttcact gtacaatgtt
      241 aatgcactct gctagaaaag ccgtaataaa ttatattttt aatgctctta ccctggcttt
      301 cttaagatgc atacattctt ggcaaacaat caataaatag ggtaatcatg aacagaggcc
      361 aaagaatttg ctgaagtgct gtttttccat ttttaataga taaagatctg acaatacgga
      421 ctgctgtgtc tgttcatttc aggatcaata tattctttgt tttcgccaaa ccgaggaaaa
      481 aataaatgat tgtacgataa atgttatgca tcagacacaa tgaaattcct ctgccttcta
      541 actttgtgcg tttaatagtc ttggttgcat tttgcacttt gcttagcaaa tacaagaaaa
      601 atctggatta taaacacaac caattatact aggaaaagta gaggctgttg tgccaaattt
      661 catgcagaat attttgattt aaataagcaa gcc
//
LOCUS       KCPA01002651             611 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 291656tic ultra-conserved element locus
            uce-4546, sequence.
ACCESSION   KCPA01002651
VERSION     KCPA01002651.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 611)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 611)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..611
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="291656tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>611
                     /note="ultra-conserved element locus uce-4546"
BASE COUNT          201 a          111 c          106 g          193 t
ORIGIN      
        1 ttgcatcctt ctctcccaga tctacctttc cctttagtat gcaaatgcac aattaaaagc
       61 actcagcagg taaagataaa tatgctaata tagtgtgctg ctaataatat tttcattaat
      121 gtatgtggaa gcaccccaaa gagcaaagag attctggaaa gttgtagcag ataagaatct
      181 gctcattgcc tttatgcaag acaatagatt ttttgaatat tctgcttcct ctccaggcag
      241 tgagctagta tggttaacca aaattgttga gtaattgttc tgtggttgag aacaaaatgc
      301 tgaattaaac tgttcccagc acaataattg tgtgattaca gcatttatgt tgctggccaa
      361 aagaacagtc attaagtttg gaagacttac caaaaccaca gttagcgaaa aaatgcaaat
      421 tacatgtaaa ttgacctcta atacctatag ttgcttaaaa attgatctag gagtatggta
      481 tatgtatatt tacaggcatt aaagccggtt gtacattcaa gaactacttc agactaggaa
      541 gaaaataccc aaagattatt cattttcatt atgctgtact tttccccctc tagcgagatc
      601 ctgcttttca t
//
LOCUS       KCPA01002652             671 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 291765tic ultra-conserved element locus
            uce-4782, sequence.
ACCESSION   KCPA01002652
VERSION     KCPA01002652.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 671)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 671)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..671
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="291765tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>671
                     /note="ultra-conserved element locus uce-4782"
BASE COUNT          182 a          123 c          164 g          202 t
ORIGIN      
        1 atggtactga gctctaaagg gctgctcaaa ggagctaatt tgatatgctt gatgaacaga
       61 ctgtgcctct gctttcttct gagaagttac ttgatccaag aagtcctgcg tagaggagga
      121 agaagaatgg tttgcctcat cacctgaaaa gggaaaaggg tgctgagaat caccaaccat
      181 tagtccaaag tgagacttgt ctggagttgt tcttaatgga gagttcattc ccgaccgaaa
      241 gctattgacg ggtatagatg tgtagacctt ctccatggaa ggaaatgctg gctgggttgt
      301 aagagtctgg ttatcagtca caaaattaag gctcgggttg ttcaaatagg catcattttg
      361 gctagttctg tccaaagctt gttgcaaaaa ctttgaatat tcttgtaaca tactagcttt
      421 atctgatgag gaagcttgag agcttgttcc aaccgtctca gaaggggtca cctcagatac
      481 ttcagtggaa ttgatggata tactggaggt cacttccgtg tcagccacgc tgaaagagat
      541 ctcatgctgt ccattagcct tgtgtgaata atgatctaaa agagtttgca gtacctcatc
      601 tggaatgaca tttttgtcat ggttaccttt aatttcaaca ttcaatgcct gtgtgtctag
      661 tattgaggct g
//
LOCUS       KCPA01002653             607 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 291876tic ultra-conserved element locus
            uce-8014, sequence.
ACCESSION   KCPA01002653
VERSION     KCPA01002653.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 607)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 607)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="291876tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>607
                     /note="ultra-conserved element locus uce-8014"
BASE COUNT          195 a          128 c          101 g          183 t
ORIGIN      
        1 gttcttcccc atcttccatc tgaaaatgtg gttggaatac agttttaagc aggatgaaag
       61 attaaacaaa aaaaaaataa tgaaaagtga aaatatacac gcaaaagcat ggtcaaatac
      121 attttgcctt gtataaactt cacccagtct acgtgggttt taacatactt ccatgacttt
      181 aaataagaaa acatcttaaa gtacagccca tgggaaaccc aagcttgatt cgttttacct
      241 tttagtacag cctgcagagt gtaaaacaca gcacatcaga attgaatttg tcatctccag
      301 accccacaag aattttagga actaaatggt taggaagcat cctggtactt ctctttgctt
      361 taatcatagc agaagtttca atttaaacat tcaggaaatc tcccttattt aaagcaatca
      421 actcgttgct aacagggtct ggctttacag tgtttaattt tttggcatca tgcaaaactt
      481 gattggttac agccatgcgt gaacaggtcg tctccctccc ccttctccct gggaaatgta
      541 aaatagcaga tctttgctgc attattatca accctgcacg tcctagtatc tgctctatta
      601 gtgcaaa
//
LOCUS       KCPA01002654             638 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 291989tic ultra-conserved element locus
            uce-1896, sequence.
ACCESSION   KCPA01002654
VERSION     KCPA01002654.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 638)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 638)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..638
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="291989tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>638
                     /note="ultra-conserved element locus uce-1896"
BASE COUNT          224 a          109 c          135 g          170 t
ORIGIN      
        1 tttcagtgaa acttccttct caaaaaatgt ttgagtgtca gctgccacaa acaagttttg
       61 ccatgtaatt taaaatagaa catctgggtt tttgcttttc aaaatgtgtg atttcctcct
      121 tgctggtaca accagcaaca gcaattccac ttctgtctgc atcacggcac ctttcaaaaa
      181 gaagaggtac tacctctgcg attgaagaat tcccgagaat attttccaga tagagcaaag
      241 tgccttggga tattgcctag cagctctatg atgtgtgcta tgtggtctat gagggagaga
      301 aaaaaaggat acgggagtgg aaggggcagg gaaaggatgg gataaaaaag aagaggaaag
      361 aaactggaat tagtaaaaaa tcagaaatag tttcaaatca acaatgtttg cagcaaatcc
      421 atgcagaggt ttccaggatc agcagagctc tggcatcatt agtagcattt aggaacaatg
      481 aatgatgccc acattaccac tgcaaagagc ttttacaagc aaacaagcat gaaaatggac
      541 aggtatacag atggaagcag gagttaactc tgattttaat tagtaattgc ctaattcaaa
      601 taaaaatata caatgtaaac attatttcag tatcactt
//
LOCUS       KCPA01002655             694 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 292099tic ultra-conserved element locus
            uce-3989, sequence.
ACCESSION   KCPA01002655
VERSION     KCPA01002655.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 694)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 694)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..694
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="292099tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>694
                     /note="ultra-conserved element locus uce-3989"
BASE COUNT          232 a          139 c          109 g          214 t
ORIGIN      
        1 aaaaataaat acactgagtt ttctatttga gagccaaact ttaaattgtg agtaaaagac
       61 aaaataatct ttttaccacg cggtgcccaa atccacgtat acgtgtgcac acgcatacaa
      121 atatccatac gcaagcacga cagcctgtga gggcatctac cctgtagaca attcaatcaa
      181 tctctcaagt gacgctccca cgtgcctgca cacacaaaag cagatgtggc attaagattt
      241 acaaagttat tgaaactttt aacaagtaaa acgcatcttt acttagctac accagaatga
      301 ggaataaagg ggtttacata tgttccaatt ctaaacctat caatcaaacc catgttattc
      361 ctttgggagc ttatttacat gcatatttat cagcctcaca tgctaattcc ctgctgtttt
      421 atgcctgcga ggcatgttta tgagtcataa ttgttgatct catttgatgt atttcactga
      481 agtaagacat tattcagtta tgtggcctaa tgtcaatgaa ttacgatgac ctgatcttcg
      541 aaatgcaact tgctctttaa tttttattag agtattactt attcagaaga aggaatacaa
      601 aatggaagat catttttata gccatttttt gaaacactcc tccctacctc taggcaaagt
      661 tttaaaagtg taattcataa acaccaaatg aaaa
//
LOCUS       KCPA01002656             680 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 292209tic ultra-conserved element locus
            uce-903, sequence.
ACCESSION   KCPA01002656
VERSION     KCPA01002656.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 680)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 680)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..680
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="292209tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>680
                     /note="ultra-conserved element locus uce-903"
BASE COUNT          222 a          143 c          120 g          195 t
ORIGIN      
        1 aagaaatcct ttcaagagat ttttattggt aaaaatcttc agattcaaac ttgcctggtt
       61 ttgcctaatt tgcttatgtt caattaacaa aatacaagcc aagtttggga aaggaattag
      121 tttctccaaa caaaaaacta caggcattca acagctccaa gtaaaatggg tccttttgtc
      181 ttaaagacta gaaatgcaac agaaacaaaa aaaatgaaaa tccaggtaca ggaattatgt
      241 atttcatact gaataattat ttctgtactg cccgtaaatc ctctctggta agctgtgcat
      301 ctaaaactca tcgaactgcc aaggggtaaa cgcagctcca tccatcacac agccacttga
      361 caaatacatt ccataataga agtttatttt tatgggaggc tgaatcaagg actttcccat
      421 gcatacaaaa acttgtcaaa attatttatg agtcttgctg agacacacaa tatgtcatat
      481 caaactccta ttttccttcc aagcacagac tgtcaatatc tctgctacta tcaataatgt
      541 ggaacaccgc tgctataggc cctcaggatt ttgaggtcat ttgcccatcc taggctgctg
      601 ccagacgccg tctctagctg caatgcagct gaggagaggt gtatttacag cctctatgag
      661 gtggagttaa ggtaagcact
//
LOCUS       KCPA01002657             351 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 292314tic ultra-conserved element locus
            uce-3248, sequence.
ACCESSION   KCPA01002657
VERSION     KCPA01002657.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 351)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 351)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="292314tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>351
                     /note="ultra-conserved element locus uce-3248"
BASE COUNT           83 a           72 c           77 g          119 t
ORIGIN      
        1 ccttgtctcc ttgctgcagg ttttgctcag gagttagcca ctcaggaatt cctagtgcct
       61 gactgagcag taatttagca agctctcttg tgctcttttc ctgtcagcat taacatgtca
      121 attcatttta atagtctggg catgcgcaga ttttctcagt aggtatccca tgagcccacc
      181 ccgtggtgca gaaatgtgtt atagcttgtc tcaggccaca gagacttcag caggtttatt
      241 ttcattatgg ccaagcgtat ttgttaagac tttcaaatat taaaatgtgt gtgattggta
      301 atttatgacc tgtgcacaga agtggtaagg gacttctttg catgatatca t
//
LOCUS       KCPA01002658             537 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 292418tic ultra-conserved element locus
            uce-5348, sequence.
ACCESSION   KCPA01002658
VERSION     KCPA01002658.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 537)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 537)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="292418tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>537
                     /note="ultra-conserved element locus uce-5348"
BASE COUNT          189 a           92 c           91 g          165 t
ORIGIN      
        1 tacctggcat catgtttcta ccaaaccaaa cacagataat ttactttaat tttggtgata
       61 tacgtaatga aacagataga agcctatcaa gtactattct gctgctgata agcccataac
      121 atcaatttaa ttatgtcatg tgactgcttc aaacaattta gatatcagac tgaagcttta
      181 cactgaaatg gttctctcaa taagcaaaaa ttttactgct gcaactttca gtgtgaaaag
      241 ggcttgcaaa catttttgtt aattatgtat tacagctgtc cttcataaag ttaattacta
      301 atagctgaaa ggcaatagac tctatttgca tatgtacatg aaaggcatga catatgcaaa
      361 aatatgattt taattagcat tccatgatat gaagggctac aaatcaaact ggcatgtttt
      421 tttaacatta aacgctgaat tcatctggac gtgtttgcag taatggacaa tggaaggact
      481 gtaaaacacc agcactatgg ggtatgagag ccacaaaagc aaagacacag tactttt
//
LOCUS       KCPA01002659             742 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 292531tic ultra-conserved element locus
            uce-5119, sequence.
ACCESSION   KCPA01002659
VERSION     KCPA01002659.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 742)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 742)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..742
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="292531tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>742
                     /note="ultra-conserved element locus uce-5119"
BASE COUNT          198 a          145 c          133 g          266 t
ORIGIN      
        1 aaaagcctca tgtttttgaa aaacaaacaa tagtactcaa atttacaact tcatttggtt
       61 ctccataagt taacatcttt gttagcagtt tctgagataa ttttgtgtta acttaagaac
      121 tgatagctcg attttttttc agatattttg atggcatgac aaatcagaaa gaagaggatg
      181 tactgtatga ctagacacaa gatcagttct gtttgtggat tacattttca gtaagatgta
      241 tggatctatt ttttccttgt tcttaaatat agatcatgag acttgactga ggcaatatac
      301 atatcatcca tccatctatg gcgaactaca gccatgcagc tgacaacatt ttacaaaatc
      361 tctctccttt aacagccttt ctgaaattga cttcactggg tttcataata ggagtcagtg
      421 tggtgggtaa ccttctgatc tccattttgc tagttaaaga taagaccttg catagagctc
      481 cttactactt cctgttggat ctttgctgct cagatatcct cagatctgca atttgtttcc
      541 cttttgtttt cacctcggta aaaaatggct ctacgtggac gtatgggact cttacctgca
      601 aagtgattgc ctttttgggg gttttgtcct gctttcacac tgctttcatg ttattctgca
      661 taagcgtcac gagatactta gctattgccc accaccgttt ttatacgaaa agactgacct
      721 tctggacttg tttggctgtt at
//
LOCUS       KCPA01002660             648 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 292641tic ultra-conserved element locus
            uce-6875, sequence.
ACCESSION   KCPA01002660
VERSION     KCPA01002660.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 648)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 648)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..648
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="292641tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>648
                     /note="ultra-conserved element locus uce-6875"
BASE COUNT          202 a          133 c          125 g          188 t
ORIGIN      
        1 aaaaaataat tatcccagga gaatattata gctgtgtaaa tcgataatta ctgtatttca
       61 catgcccatt ttaattactt catgtctgag attaaaattc aacagcctcc ctcaaagaga
      121 aagtgcttta atatctgaag tgctgctcct gtaaattggc atctgaaaga taaaaaaggg
      181 acatatcctt cctaactgac tgcaatacca atgagctgca ccgacacaca gacctcccac
      241 attcttgata gggtgttttc tagcagagtg atccacaaat attatcattc aatgacaata
      301 cagttttatc aaggtacgtc tcaatccaca ggatacaagc cccacagaac agacggaaaa
      361 tttggcgcag tgatgcgcac actgcgtgtg ttacttactg gttattgcag tggtcatacc
      421 gagtcccgta tggcgttaca ttaacgaatg gcatgcaagc accttctgtt gaaacatctg
      481 cgacagagaa atttcaggca tttttccaga tatgtgctct cgaccaaatt ttcattaggg
      541 ctataaaacc tggcaggcag cattgttgtg tatgattttt taataaactg ggacatgcct
      601 ttgttagagg agtgaagaaa agggctcttt agagacttct tcctatta
//
LOCUS       KCPA01002661             463 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 292751tic ultra-conserved element locus
            uce-4807, sequence.
ACCESSION   KCPA01002661
VERSION     KCPA01002661.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 463)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 463)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="292751tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>463
                     /note="ultra-conserved element locus uce-4807"
BASE COUNT          138 a          113 c           90 g          122 t
ORIGIN      
        1 tttattctct tgtcagattt tattcctgaa cccagatgga cctgcttatt gtgattactc
       61 acacatcact gtaaggtgaa atatacagct tcaccccact gactaggaaa aataaatagg
      121 actctctccc caccacccac acccactccc acacttccct ctgaacttga aataaaaaac
      181 ctgctgaaag attcccgatg gctttgtcag ggagggggga tggtgaggat tggtacagta
      241 tatagcatcg cagctctcct ggatcagtca cgcttcctaa ttcaataagg tgagaaggag
      301 cataatttga tcatatttgt tttgcatcac tgcaaaaaca gaaaatgagg ggctgcagag
      361 ccgcaccaat ttacttcatc cgaccttgat taaaagaaaa ttaattgccg catctctctg
      421 gatatctcag gcagcagcca atggctttcc agaatggcac aag
//
LOCUS       KCPA01002662             764 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 292860tic ultra-conserved element locus
            uce-2020, sequence.
ACCESSION   KCPA01002662
VERSION     KCPA01002662.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 764)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 764)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..764
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="292860tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>764
                     /note="ultra-conserved element locus uce-2020"
BASE COUNT          192 a          161 c          173 g          238 t
ORIGIN      
        1 atgctgcact ggaaaggtcc actgtcacca tggcaactca tatgcaatgc atacatcact
       61 tcatccagaa agacaatgcc acagtgcaca cacttggtag aaagttcatc ttgagtactt
      121 ctatcaactt tctctgtttt tactacattc aagggacctt cattttttac atttggtggt
      181 gccttattct tttccttgga ggcaccattt gcagttggcc caggtctgga atgctttatc
      241 gccaaatcaa gaggaatgtc attgtctgat ccaacagctg aaaaatgagg aggcagatta
      301 aaggtgggat aaggcacata gttttggcaa ggatttggta ggccaggcac atgactcaag
      361 tagtgtggat tcccaggaac agacagctta tatttactcc agaatctcag ccagtcagct
      421 tcactctgaa agtcattgtg tacaaacgga agtccaaaaa gtgggtactg gtatttttca
      481 atagggcttc caggtggaga atagttcggg tgtttcacag gtctcatgta tttttctatt
      541 gggctgcctc tctctgagct tcctttccct tctgatatcg atgaactgtt tcctgggtct
      601 ccagtacttt cctgaggact tttaatctga atgtgcaaag gttgcatcct tttgtgaata
      661 tccagagttt ggctgaccaa tattggctgc tgagcagaat ggcttttagt caatgaacct
      721 ggggcctcat atttactgag gctgggaagc tgaatttctc tctg
//
LOCUS       KCPA01002663             697 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 292970tic ultra-conserved element locus
            uce-7732, sequence.
ACCESSION   KCPA01002663
VERSION     KCPA01002663.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 697)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 697)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..697
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="292970tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>697
                     /note="ultra-conserved element locus uce-7732"
BASE COUNT          168 a          160 c          140 g          229 t
ORIGIN      
        1 cacttttact ttccacttct tatttgatga tagttctctt atcacaacct ctcaccgata
       61 cccctgcctc atgcccactt cctccgttgc catatctacc attgttaccg ttgtatcgtc
      121 ttacttggga tcaagtgatt ctctccagca caaaaataag aagacgtatt ctttttcagt
      181 ctcttctgat ctcccgggct aattggctca ggtgtaaacc aagccagcag ggctgtgact
      241 ttgatgtgac actttagagc agcgcacctg gtaacatccc tgtttgtgtg tcaaatacca
      301 gccggccttg cctgctgctc aaacccagct aataaaaacg ctagtaatca cgttgtatta
      361 caaggctcaa attcatgctg ttactttatt gcaaggttgt cattaatttt gcagggtgaa
      421 cctggaatct gatccgacct gtttttaatg agtgtgggtc tgtgtggaac tgtgtaagtg
      481 agtgacagaa aggtgactgc cagctgtttc ttctttacat atggtgttac cctttgcttt
      541 gatcaataat gctgtttcac tttaaaaaga aactcatttt gtaaggatgc agaagagggg
      601 ccttcctacc tcccttgtcc ccgaggtttg cttgtaaagt atatacaatt agggaaaggt
      661 cagtcaacag taagtgctcg agattgtttc tctcttt
//
LOCUS       KCPA01002664             625 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 293081tic ultra-conserved element locus
            uce-2662, sequence.
ACCESSION   KCPA01002664
VERSION     KCPA01002664.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 625)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 625)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..625
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="293081tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>625
                     /note="ultra-conserved element locus uce-2662"
BASE COUNT          180 a          107 c          128 g          210 t
ORIGIN      
        1 caaggaatct gacatagaaa tcatgttctt aaaaatctgc tgtttctcta aataatcaaa
       61 attcttcttt tttaattatg caaattaaag ttgctgagga acaattgctt gattagacca
      121 gttggtactg acctaataaa ttattttgaa tatttttcac aggaaattga tttaattgaa
      181 gcttttgtta gcccctgcaa atgtactcgg ttcatgccac agcacccagg aatttataaa
      241 tgggctcaga atgttgttca ggcaccagaa aataaacctc cgagctattt actacctcca
      301 tgatatataa agtttgcagt tttgattttg tgtgattatg ttcagcaatg gtgaccttta
      361 gaggcaacaa tattgaagtg taatgaggag atgtttgatc actggtgtac aatgaggagt
      421 tggcgtgact tctccattcc ttcctggaat ctgtgaaatc cagctgacag gctttaacct
      481 ttagactgct gagggctgaa aatgtgtagg gatttagcct gtttatacac cagggtggtt
      541 atatgaaatt ttatatcatt tcttccgtca ctccatgcgg ggatattgta taatagcagc
      601 cactgctggc caatattgtg ctggg
//
LOCUS       KCPA01002665             432 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 293188tic ultra-conserved element locus
            uce-5956, sequence.
ACCESSION   KCPA01002665
VERSION     KCPA01002665.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 432)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 432)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="293188tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>432
                     /note="ultra-conserved element locus uce-5956"
BASE COUNT          138 a           77 c           65 g          152 t
ORIGIN      
        1 aaaaatttta ataatggtct caccaagatt tagacagtaa gaaagaagat attccatatt
       61 gctgtattaa gctaaaaaaa tgttggcatt aattaatctc ttacattctg gattttttgc
      121 tagtggagta aacctaatta attatgtctg tttgatgaca ctgaaaccaa acagtaaatt
      181 caataatctc tttacatttt ccccatttaa cctcctgcag gctccctaat gtctattcag
      241 atctatatta aattaagtac caatgctaat gaagggcaat aaatgtggct gtcagtagat
      301 ttttctttca ttaagcacat tatcctctta ctgagctgta aatgagtaaa cattagtttt
      361 gttaaaccat gcagcaggat gaaaattttt tctctgcacc ccttaagcca tttggggttc
      421 tccatcctgg tt
//
LOCUS       KCPA01002666             308 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 293290tic ultra-conserved element locus
            uce-995, sequence.
ACCESSION   KCPA01002666
VERSION     KCPA01002666.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 308)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 308)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="293290tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>308
                     /note="ultra-conserved element locus uce-995"
BASE COUNT          112 a           69 c           46 g           81 t
ORIGIN      
        1 tactgcttgc acaaaagcag agtttatgtt aatgcccaaa aaaaagtgta gtgatcagta
       61 tccatcatct ttccaactgc cttgtcacta catcaattaa tacaattgag caaaaaatgt
      121 cacaagccca gtggaaaaac ctttacacag cctttcaggg ggaagtttac tcccagcttt
      181 ttttcccttg cattagctcc tgtcatccac aaaacaacag aacccagtgg tgtcaattat
      241 atttgattga ctgagtaaag cacacacaca aataagcaaa aacaatggac acaaaaatct
      301 atatatga
//
LOCUS       KCPA01002667             701 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 293402tic ultra-conserved element locus
            uce-2103, sequence.
ACCESSION   KCPA01002667
VERSION     KCPA01002667.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 701)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 701)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..701
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="293402tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>701
                     /note="ultra-conserved element locus uce-2103"
BASE COUNT          226 a          125 c          132 g          218 t
ORIGIN      
        1 catttatcgt tcagtttaga aggcagagca gctgagtcat aaaagcagcc cacaaaagat
       61 attttaaagc atttataatg actaaattgc ttgaaataaa ttagccctga aaataaacgt
      121 attttgtaca gcctatgtaa accaaatttc ttctccctgt aaattgcttg gactaagtgg
      181 gagtttgtgt ttgacaagag catgcgtttg cttcattact acatgcaggt taaaaagggt
      241 taataaacta taagatatca ttgctaaata aatgagtcct gcacccgaag aacaagttaa
      301 aaagaaatgc agggcctgtg ttgtaatgct aacaggcaat taacaaactc atgggtgtta
      361 attatcttca tactgtatca tgttcaatta gctcagcccc tgcaacaaag gcagccgtga
      421 gcaattgctt tgataggcgt acagtacttc atttgtagtt aatcggttta agccttgcag
      481 ttgctaggct acaccagtct ccagaggtaa aaagctgcac agatgcacta tgtttaaatg
      541 actacagaga actgtttaaa ctcaaaccat gtataactct ttattgattt ttcagagaag
      601 atctcagctc tgatgataag gttttgatat attttcctgc tatagccggt tccttggagt
      661 attgcagaaa aaatctgtca atatgcttct attatgatct c
//
LOCUS       KCPA01002668             482 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 293502tic ultra-conserved element locus
            uce-4337, sequence.
ACCESSION   KCPA01002668
VERSION     KCPA01002668.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 482)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 482)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="293502tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>482
                     /note="ultra-conserved element locus uce-4337"
BASE COUNT          149 a          114 c          102 g          117 t
ORIGIN      
        1 gggacctccc aactcacttg gcaccacagg gttaatctca cacatttaat atcctacctc
       61 aaacaagaat aattgcagca agaaccaagg tcttacggta gctttagtaa gaccatgcta
      121 cttcttcaga acacaacagt aaaaaagcca tgcaaatgga gatgaatgga gcacaagcca
      181 ccgaggtaat taaaaatgta ttttccatct cctagtaatt gaattgtgta caagctgcaa
      241 gttaatgagg tcatctaccc tcgagcactg acaggaaagc aggaataatt atctttcaat
      301 tttttcttat gtagcaatta attttaacca ttcgcctaca cctcccactt ccctcattcc
      361 agtcagtcaa agtcagggct aagccgaatt gacaagccat tgatacggtg gcggcgcgga
      421 gccgccgagg cgggcaaggt aatcaagggg ctgcagctgt tgagggctaa gagcttccag
      481 gt
//
LOCUS       KCPA01002669             833 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 293615tic ultra-conserved element locus
            uce-1956, sequence.
ACCESSION   KCPA01002669
VERSION     KCPA01002669.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 833)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 833)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..833
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="293615tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>833
                     /note="ultra-conserved element locus uce-1956"
BASE COUNT          246 a          150 c          157 g          280 t
ORIGIN      
        1 ggctgatgaa aaatttccca gagagatctc aggtcaggtt tacataagct aaacaggaaa
       61 tgattgccac cattcacatt aaatcctaaa tgttttgtgt aacttcatct acattttatg
      121 atcctgcacg tctctgtctc tctcagctga tgaaattcca cacttcctta gattagagaa
      181 ataagttcat gtttcacagt ttgttgttct tgctaagcta tgttatttaa tagacaataa
      241 aaagttcctt ttgattgttt aaattttaca tactttgtaa atttttatga tacctagggg
      301 tttgttactg cttttcccta tggactacta atggaagtta gcctgtctag cccatgtgct
      361 agatgctgtt aggataaaac tgcctttgac tttcacacct ctcaggggac gagtaattgt
      421 tgtgttcaaa cagcctgtaa ttgtgatccc gctggctttc tcagtacgct tctggctatt
      481 agaatcatta aacaactcag cacctgttaa cagcattgta aatattcaac cctgcttgtg
      541 tgcaggttga gtccaatata ggagaaggct tacagagccc agcctcataa attagagctt
      601 ctgacaagtc aattattgtg aaactgggct tcactgtgaa ataaatgaaa tggtgcgctg
      661 ataaaaaggt aggctgtctg tttatagcaa aggggaagta atgactagat gattcaatgc
      721 agtgagcatg aaactgcatt gtttttattc tttatctgta attaaatagt taggcaatat
      781 tgcttcatag aggaactcat ttttatactt ggaacatacc aatagaattc aac
//
LOCUS       KCPA01002670             692 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 293728tic ultra-conserved element locus
            uce-5155, sequence.
ACCESSION   KCPA01002670
VERSION     KCPA01002670.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 692)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 692)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="293728tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>692
                     /note="ultra-conserved element locus uce-5155"
BASE COUNT          191 a          162 c          136 g          203 t
ORIGIN      
        1 acctagtcct gctatttggt tcctttgagt atggattcag gcttgatatt cagataccga
       61 ttctgcagtt gatctcattt gtttcttcca aacaaaagaa cattctgcag tccaccccca
      121 cacattgttc tactaaggta aatgatcaaa tccaaatccc gggttaatga gtgccaatca
      181 tagctccagc ccccgtttca ggcttggcaa caagttcccc gagctttagc aaacaattat
      241 cattcagcta ctgtagaaat tgattcttgg gttgacgaga gcagtcctcc ctcggctggt
      301 aaggtcctgc catgggaagc aattactgca agatgccagc tgacagactc attccgtgga
      361 aagtcaggtt gtcttgatcc tcaggcactc tctaggcaaa ttgtatcctt acactcatct
      421 caaacctctt acgaactgtt ggcttctatc aggaaaaatg gattgttccc tttgtttctg
      481 tggcatttga tagaataaat ctggacatcc tgcctgcaca ataaggagat ttaattttaa
      541 aattctcgca ccaaaatgct tcagtatgat agaatcataa agcaatgaag attggtctag
      601 ggagcagtaa tgcagcacag ctagtagggc tgtgcataaa gagaccctta gcactggctt
      661 gtcattagta atcataatat tctttccccc cc
//
LOCUS       KCPA01002671             512 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 293840tic ultra-conserved element locus
            uce-1535, sequence.
ACCESSION   KCPA01002671
VERSION     KCPA01002671.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 512)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 512)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="293840tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>512
                     /note="ultra-conserved element locus uce-1535"
BASE COUNT          147 a           88 c           90 g          187 t
ORIGIN      
        1 tataatagtt gtcaaattaa tttctaccaa ttgtgtgtaa aatcgttgcc aaagtctact
       61 ttgggataga gagacataac ttagttatgg gcaccctgct gacttaggaa aataagcctt
      121 actacccagt caggcaggat gttaaatcat ttgtgattac taatgtctaa gtactttgtc
      181 attgccaagc tctcattttc catcagagca attctaattg atttaaatgg tctgtttcgc
      241 cttggtgcac gcatgatcac gtcgtaagtg gtctttagga ctattttaat tgccaaggat
      301 gtttttcctt aagaaaatct ctgtgcccag agcagaacaa attattattg caatctacaa
      361 atacacaaac attgtttttc tcccctctct gcatgttttg ttacaccaga ctctcttgtg
      421 ttttgggggg gttcagtctt aatttatgca aaattaattg atatatcttt tataattgat
      481 gtgctgtaaa attaatgagt aatttatgta at
//
LOCUS       KCPA01002672             648 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 293952tic ultra-conserved element locus
            uce-3723, sequence.
ACCESSION   KCPA01002672
VERSION     KCPA01002672.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 648)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 648)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..648
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="293952tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>648
                     /note="ultra-conserved element locus uce-3723"
BASE COUNT          173 a          134 c          132 g          209 t
ORIGIN      
        1 cagaacaaca ttagactttg cgtcactgat cctaagctgg tttaatgtga atttgttggg
       61 acatgaggtt ttgaaactgg agtaaagcag aaagcatggc tgtaaagcaa agtaccccaa
      121 ctttgtttag atacttaact gctaaccaac ctgcatgtaa aaaggaaatt gtcgattttt
      181 gtggaaaaga cacctcaacc tttgcctttg ctagcacggc aattctactc tgttttccac
      241 tctctttggc ctaacctttg cttgtgatgc atttgagcat gtagaaatta agggggtttt
      301 gctcttaact ttggtagttc aaaaatgggg cacagatgaa gttgctgctt ggctggatct
      361 gctcagtttg ggagagtaca aagaaatctt catcagccat gacatccgag gctctgagct
      421 tttacacctg gaaaggcgag atcttaaggt atttcctttg tgctactttt ctgctattga
      481 ccattttctt tgacaaaaca acaaccaact tttcttcttt ccctgcactt gtcattgctt
      541 gtagcttggc ttacagtgtg caaatatgca ataaactaat atgcgctgtc cttgggccta
      601 ctttctgaag tgctgacttg aactcacaac caagaatatc tgttatcc
//
LOCUS       KCPA01002673             326 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 294051tic ultra-conserved element locus
            uce-5211, sequence.
ACCESSION   KCPA01002673
VERSION     KCPA01002673.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 326)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 326)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="294051tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>326
                     /note="ultra-conserved element locus uce-5211"
BASE COUNT           99 a           64 c           72 g           91 t
ORIGIN      
        1 gtgaaccatt ctattaatac caatcaaatt gagaaaatga tcaaatgaaa ttgcattttg
       61 agaatcataa gctgtgtaat gcctattctg ttaaattgag gcccataatt gcttctccac
      121 tgaaaagata caacaaaggc agcaatcatg gcatgtcatt atcccagact ggcaaaccag
      181 cctttgcagg gaggacttca aaggcttgtg gttctcgaat tgcatttggc tgctattgtt
      241 gaagcacagg caatcttgat taggtgttta caccgaggga aggctcagtg cacagagagt
      301 ctgagtgcct tgctctagag ccatta
//
LOCUS       KCPA01002674             633 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 294153tic ultra-conserved element locus
            uce-4829, sequence.
ACCESSION   KCPA01002674
VERSION     KCPA01002674.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 633)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 633)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="294153tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>633
                     /note="ultra-conserved element locus uce-4829"
BASE COUNT          196 a          130 c          115 g          192 t
ORIGIN      
        1 aatcaatgta atcagcttct gagaacaatg ctaaagactt tgttcctttt aatttaatta
       61 attcacctaa ttcttttatt gttattcaac tttgcaccct gatttgctct tttcaaatcc
      121 atttcctcct tgtcttgttt aaagcagttg gttaacttgg aactcttgta gcaggaactc
      181 aaaatttagt gatgtaagca agaaatagaa atgccagagc caccgaagag aagacatgcg
      241 gcattgctta cttaaagccc catcctgtcc ccccaaggac aatagctgct accaggatgg
      301 caccagcgat ggagcctatt ataagattgg tggcactagg acctgtgata aaggattagg
      361 gtaagacata agaaccaatg acttcattca cattatgtga agcatctgaa ggaaacaatt
      421 cactagacag tctcaacaag cccaacttaa cttacttttc ttgaacaata gagctgttgg
      481 tctctgcatt ctgctatgct gacttctacc aaacctagta ttagacagtg aattccattg
      541 taacttactc cattatctgc tgatgaacag tcagctgagg atactagata gttgtgaata
      601 attccttaac tcgggaaaag tatgaatgct gta
//
LOCUS       KCPA01002675             566 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 294262tic ultra-conserved element locus
            uce-3043, sequence.
ACCESSION   KCPA01002675
VERSION     KCPA01002675.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 566)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 566)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..566
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="294262tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>566
                     /note="ultra-conserved element locus uce-3043"
BASE COUNT          157 a          119 c          105 g          185 t
ORIGIN      
        1 tctagccact aaaattagta ttaagagaca cagaaagctc agtggagttt tcccagtttg
       61 tcctgcggct aatcttttta tattcttttt taaaatcagg gggaggggct ggcatgtcta
      121 aactcctaac atatgtgctt cttatccaac atacagtagc ttaggacttt tcaaaaacac
      181 agaaccccgg aatccaataa aattgcaaat ttcactgtat ttcacaatat cctaaataaa
      241 catgaacagc gtgcatttct ctttctggca tcaaatatta atctgtccgt ggtcggaaat
      301 gtgctttcca tcttgtgtgc gctcacattg ggtaaacact tgggagattg ctattccaga
      361 cctttcattc tctcctagag tcaagagcat gacaaatttt tctcctaatt acacctgcca
      421 ctgtttgcct tctaatactg taaatcctcc atcacatagt ttttcagatt caggattagg
      481 ttccttctct gtcatacaaa tgattggagg tgcagtgtgc agttagcaat gcacattagg
      541 aatgtttagg gtgggtctgt gtgaac
//
LOCUS       KCPA01002676             472 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 294372tic ultra-conserved element locus
            uce-1143, sequence.
ACCESSION   KCPA01002676
VERSION     KCPA01002676.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 472)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 472)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="294372tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>472
                     /note="ultra-conserved element locus uce-1143"
BASE COUNT          138 a           79 c          116 g          139 t
ORIGIN      
        1 tttgggttca aggttgagct ggagatgttt cctggcagaa tgtatatccc ctgatcacac
       61 ctttaggaga ttatcccatc attaaatatt tgtaggataa caggagaagc ctaatttagt
      121 ttttgtttct ttttctctgt ggtttaatca cagatgaaag agactaatag cactacagag
      181 ctttctggtg atcaaaggcc aatcaatcct ctttgtggag taattaacta tttgctaaac
      241 ttgcagaatt gatttccatt tagggctaag agagagggtt ttaaatgaag accgatttac
      301 caggcatgag gagggaatct cagcactgat gccaggagat actcagagtg atgaattgga
      361 gcctgctaat tggaggatga aaaatacagc tggaatctgg ccccgtttgc tcctactttg
      421 gtggaagaca ggaaaaggga aatcaggctg agaacctgac agatggcttt gt
//
LOCUS       KCPA01002677             499 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 294479tic ultra-conserved element locus
            uce-3744, sequence.
ACCESSION   KCPA01002677
VERSION     KCPA01002677.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 499)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 499)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..499
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="294479tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>499
                     /note="ultra-conserved element locus uce-3744"
BASE COUNT          162 a           95 c           94 g          148 t
ORIGIN      
        1 tgacagtttt aaaaatcact taaaatccac ataaaagtac agtatgtggg attcaaataa
       61 acacaagtgg cctactaatg cactaacgtg tgtgcaatta ttttaaaatc tggttgcaca
      121 acaatgaact ctgcttttca tcttaatctc atggaggaga aaagatttct gtggtcttgg
      181 taaaatgcaa tccacgccag gcttggacta gtctggccac ccaggtttgc cttttcatat
      241 atctgataga tgtgttttga caagttatat taagtacaaa gcaggccacc agagcagcat
      301 gtggagttga tatagacaga gacagaaagg caaataacag tatgaacaca cttttgtagg
      361 cagtatttgc tgtaaccaag tatcccccca tacatcatat taccacactt catgacaatg
      421 taagaaacag tgtttaaagg ctttcaaaag gcaatatttt gtgcaggatt tacagtcttt
      481 gcatctccct tatctgtgt
//
LOCUS       KCPA01002678             543 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 294590tic ultra-conserved element locus
            uce-6031, sequence.
ACCESSION   KCPA01002678
VERSION     KCPA01002678.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 543)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 543)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="294590tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>543
                     /note="ultra-conserved element locus uce-6031"
BASE COUNT          179 a          121 c           93 g          150 t
ORIGIN      
        1 ctctctaaat ttacaggatt gagcaccact tactacatga gactgaatat atgcattttt
       61 aaatggcact tagacatgag cggcttaaat aaaaaaggct tatacattgc caatataagt
      121 tacaaattca aacattcggg catgaaaatc ctttccctaa gttgttttca agcttcatcc
      181 ttttttctgt aataactaaa gcaaagccac agtagctgca gccatttgca tctaaggaag
      241 agatgttttg ctttggtgat atagttaatg agtctaaaaa tattcagtat aataattctg
      301 tcaaagcccc cacagtctcc tcaatgagca gaagcctgca ggattccaat ggggagccaa
      361 gtaatgagct ctcagcattc gctcccacac cgtccagacg aaatatactc gggcctccac
      421 ggttccacat cattagcaac atgaaacaaa gacacatgct tgactttaat aagcgactaa
      481 agttgctggc ttattaggct gtcactgcac ataaactcta tgacaaaaca gttccctgca
      541 aaa
//
LOCUS       KCPA01002679             661 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 294698tic ultra-conserved element locus
            uce-5528, sequence.
ACCESSION   KCPA01002679
VERSION     KCPA01002679.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 661)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 661)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..661
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="294698tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>661
                     /note="ultra-conserved element locus uce-5528"
BASE COUNT          210 a          118 c          128 g          205 t
ORIGIN      
        1 gaattattta gcatacaaat aaaccagcaa agaagcctaa gtaggccaat atgaactaac
       61 tcgattgaaa tattcatctg taaataactt ttcaatctgc tgctttcacg tacaaatact
      121 acatggaaca ttagacacaa ctagcttcta gggatattta ggctcactgg agagcaattt
      181 ttatgtctac tggcatctgt gggtagtgat atggactgac tgttaatata accaacataa
      241 aatttatgtg aacactcact gcaatagcaa cacactgtca gacagctggt ggttgatgcg
      301 tagcacatgc ggattttata tgcactgtgt aaactaacct ttgcaaaaaa gatttagcag
      361 gtttattagt ttaggaaatc gctataatta aggataattc ataatggccg cttatccatt
      421 ctacagcaat agctgcttta atttagactc tgtttctttg agtcataaat aagtgtgctg
      481 atatcttctg cacagatgtg gcactcaacc tgttcaagct ggttgagttc tgcttgtgtt
      541 ttaatgctag tagataagcc cataaaaggc actttgcttg aaataaattg cagcttgaaa
      601 gttctgaaac ttagtagctc ctttggagag gggaaactca gaaattttcc gccagagagc
      661 t
//
LOCUS       KCPA01002680             656 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 294808tic ultra-conserved element locus
            uce-6471, sequence.
ACCESSION   KCPA01002680
VERSION     KCPA01002680.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 656)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 656)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..656
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="294808tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>656
                     /note="ultra-conserved element locus uce-6471"
BASE COUNT          203 a          108 c          107 g          238 t
ORIGIN      
        1 tagtgaaaca taatactgtt gcccagggaa gattataaaa atggaagagc tcaattactt
       61 tgtctcagcc atttttctga aggtgttaat ttgccaaagc atttttgaat tatttcatat
      121 acagtattgt attctggtat tggataagct tttatgaaga gctttaaata tatcactagt
      181 aaatgtttac tcagtgtttt gtgtttgatc ttttttgtac aatctctata ccaaagctgg
      241 aatttatttt caatgactac atataaatgc aacacacgct ctgtgtccta acagatgcca
      301 tctgtaaaag catttacttt aaattagtgg aataagtaat caaaagggct ttgtacttaa
      361 tgcagaactt ttggtgacta ttaaatactc attagagggt gtttttgctg tatgactgtc
      421 aaaatcagca ggacgtttat gttagatttc ctgagtgggt caagattgaa tatgatttta
      481 caacttaaat aacataaatg aatgcaggtt atttcagaat ctccagatgt tccttaaact
      541 ctctgcccct agcaaaactt actgccaatt taaattttgc ggcaatatta cagtgcagat
      601 ttttgcttta aatgcttaac aactctctcg ttacattctg ctcatttcca tcccaa
//
LOCUS       KCPA01002681             656 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 294917tic ultra-conserved element locus
            uce-2077, sequence.
ACCESSION   KCPA01002681
VERSION     KCPA01002681.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 656)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 656)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..656
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="294917tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>656
                     /note="ultra-conserved element locus uce-2077"
BASE COUNT          208 a          108 c          133 g          207 t
ORIGIN      
        1 gaagacacag gctgtgactg tccagaagta ggctgcttgc agcatcttat cctgtgcctc
       61 aggcaacatt gtgcagacag actcagtcaa gagggatgtg tgaactcgtg tggatatatt
      121 tctgggtttt gttcctccct ttcaatacaa tctttttagt gctgagctaa ttatgtagtc
      181 tcagttttac tgttgagtta gagtacctga tcaactttcc aactgtaaaa cagtttgaaa
      241 atcaaatgta gcttacatgc aagacccaac aaaattagaa gtgttaagta cgttttggca
      301 gttcactttt attatgccca gtcctcaaat gtaccagcag acaatcatct gaatgttagt
      361 tatttttcac atgcttatgt gatcacacaa aaagtacatg ctaaaaagaa gcagatggtg
      421 acagatgggg aaggttgaat aaggtggttt tggaaaccta gaaaaatgca cttctgtaat
      481 agtgtaaaaa taaaaattct ttgatcgcca agttagaatg aacaaaatag accaaaactt
      541 tactgataga aagaaatgga acctatgaat gttcaatatg tatttagtgt agtgttgttt
      601 tgtcttttta ccagccagag acttagaaag gtggtagttc tttctttcct ttaaaa
//
LOCUS       KCPA01002682             307 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 295018tic ultra-conserved element locus
            uce-4544, sequence.
ACCESSION   KCPA01002682
VERSION     KCPA01002682.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 307)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 307)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="295018tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>307
                     /note="ultra-conserved element locus uce-4544"
BASE COUNT           95 a           62 c           52 g           98 t
ORIGIN      
        1 acaacttctg gagtcgctac tctcggttta ctacctccga ttgccctggg tctgatggag
       61 ccagtttcgt aatacctgcc caaaatttta ctcacacatc cattcgacac ctggataggg
      121 aagcggacag aaaatcacat tattaataat ttcaagacaa aaataaaatt gtttaagtat
      181 gcattaaaca atgacaagct tacgttttga ttgtccagca cttggacttt tgcatctgca
      241 tgggtctata acacaaaaat ataccttaaa tggtatgaga acttacttag agagtctttt
      301 ttttttt
//
LOCUS       KCPA01002683             435 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 295124tic ultra-conserved element locus
            uce-2681, sequence.
ACCESSION   KCPA01002683
VERSION     KCPA01002683.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 435)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 435)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="295124tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>435
                     /note="ultra-conserved element locus uce-2681"
BASE COUNT          131 a           77 c           66 g          161 t
ORIGIN      
        1 cattggaagt ctattaatta taataatccc atccaaaaag ctgtgagggc ttatttttgt
       61 gacatcactc tttgatttct tactgcctta aattatccct ttgttggctg ggtgagggta
      121 acagtcatac ttttgtcatt aaatataagg agttttaaag cctgatccac cccagctcta
      181 attgatattg ctttcatttg gcagatagtg acctgattta taatttaaat atgcatcatt
      241 atatgcacct cttctgtata atgaaaaagt gaagttactc tcatcttctc ttgcaatgtt
      301 aacatcaagg aaaagtatct acttagagcc taattgaaaa ctgttcattg aatttcaaca
      361 tgatagaaaa gtctttttat ctctcaattt gtccattagc tattataatt gaagtatctg
      421 ctccacagct gaatt
//
LOCUS       KCPA01002684             760 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 295233tic ultra-conserved element locus
            uce-1471, sequence.
ACCESSION   KCPA01002684
VERSION     KCPA01002684.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 760)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 760)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..760
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="295233tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>760
                     /note="ultra-conserved element locus uce-1471"
BASE COUNT          179 a          213 c          146 g          222 t
ORIGIN      
        1 tacttttaat ttgcagtaac accacagcag agggatgcaa gaatgactgc tttccaaccc
       61 tcccttccac aacaagctgg gccacatctt tccctttcta cctctacctc cttccacccc
      121 ctcttcaacc cctcccattt taaactgtgt ccaagacaac acattatctc aactcccccc
      181 accctgaact aatcaaagga tgagctaagg gagggctctt tagaatggat gcctctgcaa
      241 ccctctcctc tcctgcaata atcaggtgaa ttaatgaccc tgaagttaaa gtgagcgctg
      301 atactgaggc gttgtgcagc gtaggggaga aagccttcat tgttttcaag caggaggcgg
      361 gcagcagcaa gggagattca tggatggaga ttgaatatgc aattttcttt caccttgcca
      421 agagctgccc ctgggctgtg cctggcctaa attttttttt cctcttgcca tctctgcctt
      481 atccagccct cccacctccc ttccattctt tccagaaaat taccttcaaa attgatttcc
      541 acttttacaa acaaatataa tgggaacatg aggggggaaa aaaatcttgg gctgtgatga
      601 attagggctg tcaggtgctt ccaagtctcc tttgtttttg ttttactgcc tgttaggttc
      661 tttgtttttc cagcgactgg gaataatgcc cctgcccgtc cccatggtcc atggctacct
      721 ttatggccac cacctgatgt cattatccct gctctccatc
//
LOCUS       KCPA01002685             904 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 295344tic ultra-conserved element locus
            uce-6166, sequence.
ACCESSION   KCPA01002685
VERSION     KCPA01002685.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 904)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 904)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..904
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="295344tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>904
                     /note="ultra-conserved element locus uce-6166"
BASE COUNT          266 a          178 c          178 g          282 t
ORIGIN      
        1 atcatggatt gaaattggaa accttaaatt attgtttaat gatcaatgat caaacgtata
       61 atcaagataa agaaaattag gatggcagac agcaacatca caatttgaat tttacattat
      121 tagtcttctg cctaactagg cacttttctt gagtatctga actgttttgc cttttaactg
      181 tgcttgcagt tgctatagtg atggcataat ttcgtaatgg tctaaaaatg acactggcat
      241 agatactgac agataggaat taattcacta acaagtaatt atgtagcgaa atgttgactg
      301 ccatacagaa ggtgcactgt gacacattta ctgtttttca gggatggcag taacattagc
      361 gttggtcatt agtggtagac atctccgtac agtgttggat acagacttat atgcagacct
      421 atttagttac ctgtgtgaca gccttgttca ggacaccaga aacagctgtc ctagcctgta
      481 tgagccaaaa taattaggcc tgtcatcttc tcgctctgat ttccccttca acctgctcca
      541 caaaatgcaa atattttgct ttcattgtca cattcacctt gacatggata ttgctttggc
      601 gcataactgg atgagatgac tcagaatttg cattgttcat tctaataaat ttgcttcccc
      661 tctaccgcat ggcaggaccc atcagataaa gtctcccaga gtgtcatcaa tcaacatcgc
      721 tgacagacgg cttttgcctt catttgttac ataggagaac atgcttaatt atttgtcctg
      781 taattagttg ggaaaatgtc aggaaatgtc aactctctgt tcactctgga agggctctgc
      841 ttgaaagcca caatgactga agtgtcatta atgctgccta acaagacgag gatcagctgg
      901 ggaa
//
LOCUS       KCPA01002686             607 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 295456tic ultra-conserved element locus
            uce-3542, sequence.
ACCESSION   KCPA01002686
VERSION     KCPA01002686.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 607)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 607)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="295456tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>607
                     /note="ultra-conserved element locus uce-3542"
BASE COUNT          176 a          112 c          113 g          206 t
ORIGIN      
        1 aatgtaatca gtatatgtag tttctctaat ttggaaagag atttctctaa ttcatagcag
       61 acactttctc ctaccatatt ttgtagagga tacttgctac gggatttttt aatgttagaa
      121 aagtagaaat cttattttct tcaaaaatga ggagggatac tcagaaattt acagtaaatg
      181 gcaattcatc ctttagaaat tccttcaacc tactattaga gttgctgcca gagatctgaa
      241 tgcttttgcc taaatctctg taatccaata agctttagca gcttgttttg aaacttgtat
      301 agcaccccag ccagtgtctc tgtatgttcg tttgcaggca ggtgagtgcc ccagggcctg
      361 attattattc aagccaggag gccttcacag ccccaaccag aatgtaattt gtaattaact
      421 gtcatttact tctgtctgca ctgacttgtt gttcaaaaga ctgtgtatat gagctggtca
      481 ctagcttctc tttgttgtgg atatgatgtc tttcagatct agttttattc ataatgttta
      541 gaaaaccaag tacttgcact cttgaaacca gagcagaaag ggcatttccc aaaaaaatta
      601 ggtagat
//
LOCUS       KCPA01002687             386 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 295566tic ultra-conserved element locus
            uce-7667, sequence.
ACCESSION   KCPA01002687
VERSION     KCPA01002687.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 386)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 386)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="295566tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>386
                     /note="ultra-conserved element locus uce-7667"
BASE COUNT          116 a           61 c           63 g          146 t
ORIGIN      
        1 cagtgttcaa ttattatttt taaaatgctg gattacagct acgaattctc tggaggttaa
       61 actggagcct tattataagg ggaactacaa gtaaacatta ttaattataa aaaaaaattg
      121 cttaaattag ttttttttca cacctgcttc tttcttaatt agcttgtagt ccacatatct
      181 cagtcagttg aactctttag tatttattca agcatacttg acattaacat actgtttgat
      241 gtttgatatc ctgagttttt aatttaccac atgacaacaa atggtattta tgaaatatca
      301 gtgagctgga aaaatatcct gtgaagctgc ttccggaatt tgtgccttgt gctgatgttt
      361 ttatcctagc aagatttcca ggctgt
//
LOCUS       KCPA01002688             454 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 295673tic ultra-conserved element locus
            uce-7590, sequence.
ACCESSION   KCPA01002688
VERSION     KCPA01002688.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 454)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 454)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="295673tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>454
                     /note="ultra-conserved element locus uce-7590"
BASE COUNT          160 a           63 c           82 g          149 t
ORIGIN      
        1 taatgtatgg acattatttt tggactattg aatgccagaa aataatgagc tggcattcag
       61 ctttggtgaa tcagcccttg aattttcatc taagagcagt tttgaattat tactgaagat
      121 aaggtgtaaa tgtgcaaggg aattttatcc atgtttctcc catgaatcat aaatgaggaa
      181 aaaaattaca gtctaaattg cacttaaaag gaataaagtc ttttcatgtc atacatgatt
      241 tatcaaaatg atctcatttt aagagtactg tggtgtatct tgattaataa cattagtaag
      301 catgatgaat ggcctcttta atggtaacac agaatttatt ggcaaaattc ttccaaaaag
      361 ggtgggaagt aaaacacaga gcagttagta atttgcagaa acagcttaag taaactctct
      421 gtatatggca tttacatatc cttgaaaatc ctta
//
LOCUS       KCPA01002689             616 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 295783tic ultra-conserved element locus
            uce-4012, sequence.
ACCESSION   KCPA01002689
VERSION     KCPA01002689.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 616)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 616)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="295783tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>616
                     /note="ultra-conserved element locus uce-4012"
BASE COUNT          168 a          160 c          136 g          152 t
ORIGIN      
        1 tgatggaggg cttgcaaggc ttggtgggac caccttcaca aggccacagt cagaaaaaga
       61 ggggggaacc ccaaaattct cttgatccca agccaaggcc ctgcacctgc agaaatcctc
      121 aactatcaca tttctcctgc tccagatgat aacgaagata attgtttcat ccactttgtc
      181 aagctgaaat gaaaagaggg caaaatgatg ccatcataaa tcatcaggct gagacagcaa
      241 aaagaggaca agatagtgac ttcattaagg gttatgtatt gtgtcattaa gctggcaggg
      301 gtcacctttc atgtcacgca gcagccccat gatgcattgc tggctcctct ttccaataaa
      361 attaaacgta gatgtaaaac tgattaggcc gtgtttgcct gagcccaagg cagggaactg
      421 cgccgggaat aattgataca agatcgcggc tgatttgtaa tggcagcgat ttctcttcct
      481 ggtcatttct ctgctgacct tgcccattaa aataagccca gctgccttga aaagagagac
      541 gctcattcca cccctccctc cccctgcccg agccacttgc ctggaattca tttcctccct
      601 cgtccgcagg atttct
//
LOCUS       KCPA01002690             565 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 295895tic ultra-conserved element locus
            uce-3937, sequence.
ACCESSION   KCPA01002690
VERSION     KCPA01002690.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 565)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 565)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..565
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="295895tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>565
                     /note="ultra-conserved element locus uce-3937"
BASE COUNT          214 a          115 c           97 g          139 t
ORIGIN      
        1 aggaaataac attagcgcta atttctataa tgccagccaa gatatgcaca agcaagaaaa
       61 actgaaagca tttgctaaaa tgtaacaaat acttatgtac aaaaaattca ccttgaagca
      121 gagcacatgg cagttgacac tggaacagat ccactggctg ggattataaa ccacgtactg
      181 atccagaaac atgtagtgga gattaacatt taccaaagtt tggcaacatt tttaattatg
      241 caaattatgt aaacaagagg aacatttcaa atcgatctac atgcaaaact tcatgtcatg
      301 cggatttctc tctcacagac agagcccatg atgtgcagca ctcagttgaa ggaacagcta
      361 tggcagacag gttcagacaa cctgcactcc actgctcatt ataaaacaaa aaactactat
      421 acaggaaaga tgtactgtcc taaaaaatct agcaaatgtt tttcttccag ccaatagtac
      481 cactgcagaa aagggaaggg atgatataaa gttgtaaaac atggctcgct acttttacat
      541 cacacaaata gaaccttcca ttaca
//
LOCUS       KCPA01002691             723 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 296006tic ultra-conserved element locus
            uce-791, sequence.
ACCESSION   KCPA01002691
VERSION     KCPA01002691.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 723)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 723)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..723
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="296006tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>723
                     /note="ultra-conserved element locus uce-791"
BASE COUNT          211 a          167 c          108 g          237 t
ORIGIN      
        1 tgtatggttg gaaaagagct agaacatttc ttctttcacc ttctactctg aatccttgca
       61 ataattagcc aaagtaaaat gaatattagc ttatgcttaa ctgcctttcc agcatgttac
      121 tctgcattga cccagtagtg ctaaaccaat tattttttga actttatggc tttaaataat
      181 ccactgcttt aaaactccct ctacccctca gctacttaac cacaggcccg actgccctaa
      241 atccttttct tatactttgt agctttttaa gcaagccccc tctttaagta gacataatcc
      301 cttctctgta gaaaacatga aagaccttga acaaatcaag atttctccat ggagaattca
      361 gctaatcctc tgcttagctc ctaacaagga aatccatctc accaccaagc accccattac
      421 tagaactaat gcctgacttg aataacaagc acattattgt gctttaattg tagcactgtt
      481 ctgtcacatg gagtagttgg agagaaacgt gactctgctt ctccaggaaa gacaggtcac
      541 gcctttttgt tgttgttcac cttactgtga tttaaaagca gattaaatta actattaata
      601 tgaactgcac atgcttcaga ttagatgaaa cagctgtact gtacctctct agtacactct
      661 attataaaac aagtgctgtt acactggatt actattctcc tttacgttgt cttttgactg
      721 ttg
//
LOCUS       KCPA01002692             384 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 296113tic ultra-conserved element locus
            uce-2399, sequence.
ACCESSION   KCPA01002692
VERSION     KCPA01002692.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 384)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 384)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="296113tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>384
                     /note="ultra-conserved element locus uce-2399"
BASE COUNT          102 a           97 c           98 g           87 t
ORIGIN      
        1 tccatcccag gaggagctcc ccggcgtgcc ctgttggggt gggccgagcc ctgtgggagg
       61 accagggctc aggggcttcc ctgacttgca ggatctttca tcctccgtca ccacaaagcc
      121 aggccagatc tgcatttgca gcagcccaca gaagctgcct ctgttgtctt atttttgtta
      181 tttttgagag gatattttag cgctgagcac attccctcct gttgccatgg cagccgtgac
      241 aggggttata taccgtgaga aaaataccaa aattaatgag tgagtgaaag agcagccaag
      301 agaaaaacaa ggttgagtta aaacagtaat aaaaacaatc tcccaataat ttggcagcga
      361 gcatcccaca ggcggcgaac atcc
//
LOCUS       KCPA01002693             577 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 296225tic ultra-conserved element locus
            uce-2465, sequence.
ACCESSION   KCPA01002693
VERSION     KCPA01002693.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 577)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 577)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="296225tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>577
                     /note="ultra-conserved element locus uce-2465"
BASE COUNT          150 a          166 c          131 g          130 t
ORIGIN      
        1 caggacacag aaaatgccac ttgcccaaga gctggagaca tttgtgcctc ctgctctgtc
       61 cacatgtccc tggagccttc cttgcttcca gaagccccca ctctcccaca accacctcaa
      121 tcttctgaaa ttcttcaaat tccagcaagt aaactcttgc tccagatttc ccttcacagc
      181 tccagcacag tctgaacgtt ctgttcgtac ccagctccta cctattcgag tattggcaaa
      241 tacatcagct agtgacccac tggtcccttt gccttctcca tgggaaagtg tagaggatgc
      301 tgatgaggat gtggatgacc cctgaacaga tcggttgatc caagactcag cattctgtaa
      361 gctctggtgc aatgcagcag agagagcagc ttggcgcctg agcgagccct cgtcctcgga
      421 ggcggaagac gtgtctgtgt ggaagcagaa agaaaatctg ggaaaagcac atggcactga
      481 acatgctctt tccaatcaca tatcaacagc acaggcaaac cagaggttaa agcagcggtc
      541 ggcggtggga atctccaagc ctagaactcc actctca
//
LOCUS       KCPA01002694             386 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 296332tic ultra-conserved element locus
            uce-2964, sequence.
ACCESSION   KCPA01002694
VERSION     KCPA01002694.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 386)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 386)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="296332tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>386
                     /note="ultra-conserved element locus uce-2964"
BASE COUNT          106 a           58 c          103 g          119 t
ORIGIN      
        1 ggctgactcc ttgttagaaa tgaggtacaa gtatggaaag gcatggactg gagtgtactg
       61 gggccaacaa gggcctgact tgatcaactt caacaggctt tggatcaggt ttagtgactg
      121 tttgcatgaa ggctggtgtg agtattctga gaaatgtggt atgtcactgc agagaaagga
      181 tggtgcttta ctgggggtgg aaaatggaat tgtcactgtg gaatgaatga attgtacagt
      241 ttctcttttg taacccaggg aataattaag atagatgggt agatgaatta gctgtcctgc
      301 aaggtcaaaa gtggattgcc ttattactct attatttcac tgttgtggaa ctatcaccac
      361 taacaccttt ttcatgatat ttcgta
//
LOCUS       KCPA01002695             537 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 296438tic ultra-conserved element locus
            uce-4320, sequence.
ACCESSION   KCPA01002695
VERSION     KCPA01002695.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 537)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 537)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="296438tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>537
                     /note="ultra-conserved element locus uce-4320"
BASE COUNT          142 a          106 c          139 g          150 t
ORIGIN      
        1 aacgcacatg tgtgttttga actgatatta cagaaaaaaa tagtttgttg tcccagcaga
       61 ttcccttatt gaacaatatt ggcattaaat aaaagagctg aatcataggg tgacttcttt
      121 atttcttctt actggctctg gttgtatgtg atcatgtgtc aacagagcat tcattgggtt
      181 agtcatttct ggaccagtgt agggtcactt gggattcaca gggctaggat tataccctct
      241 cttcacagca atgccaattg taggccttat acagatgaga gcactgagtg agaaataaag
      301 tgcatggtgg atgaaaggct taactgaatc gctttcagcc cattgttagt ccaggggagc
      361 ttagcgggga tgagagggca gcagcccgct ttgaaatttg cttgaacaag tgaataggag
      421 ctccccataa agcagcgcct gaaaggagct gcctgttttt tcctgccgta acaatggccc
      481 gcgcaggctg tgagagtttg gggaagcttg gctgattaaa ctgcccgcag ctccagg
//
LOCUS       KCPA01002696             480 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 296543tic ultra-conserved element locus
            uce-4189, sequence.
ACCESSION   KCPA01002696
VERSION     KCPA01002696.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 480)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 480)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="296543tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>480
                     /note="ultra-conserved element locus uce-4189"
BASE COUNT          157 a          106 c           89 g          128 t
ORIGIN      
        1 taactgtcag tgctgcatta aaagccctga ttgttgcctt gtagagaaag gaagagacaa
       61 gtctggaaac caacaaggga ttactatttt tatattagcc tgtaattaaa taatagttca
      121 tgttgccttc ttccactggg aattacatcc ttttcacctc tcctctgcta aagcagagac
      181 atccattacg atgagtagct acaacacttg tcagatccaa tcagctccaa atgactgaaa
      241 agcaactgac atgtgctctc ttaaagcatg gtttcttctc ccccaaaagc ccactgtcct
      301 ttcacgtgca tgtaacagtc agaagagatc acatcacgca atgaagaaaa acagaagcat
      361 atggtactaa ggggcctctg caggagaggg ctaaaatgcc aaggctcaca cataaagtat
      421 atgcaaaaat atgtgttcat atagaatgcc agataatcat ttcagttacc tcgcattatg
//
LOCUS       KCPA01002697             301 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 296643tic ultra-conserved element locus
            uce-2202, sequence.
ACCESSION   KCPA01002697
VERSION     KCPA01002697.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 301)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 301)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="296643tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>301
                     /note="ultra-conserved element locus uce-2202"
BASE COUNT          107 a           56 c           48 g           90 t
ORIGIN      
        1 tactgtttac caaaaagaaa cttgagcagt ccaggaaaag ctataaattt atgaaaacca
       61 taaattgagg caaacctaag attcccaatg gaatcaagat tatcttcccg ctaccaccac
      121 cttaaaatta tcacatgctt attggaacac taatatctgc accctaggag tacatttgct
      181 ttcaacaatg agggtgattt tttcaaaaac acttcagtgt ggtaaatgcg atacagatct
      241 ttgcaagttt tggaacagtt ttgctaatag cagctagcaa tactggatta atataattta
      301 t
//
LOCUS       KCPA01002698             560 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 296751tic ultra-conserved element locus
            uce-4848, sequence.
ACCESSION   KCPA01002698
VERSION     KCPA01002698.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 560)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 560)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..560
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="296751tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>560
                     /note="ultra-conserved element locus uce-4848"
BASE COUNT          185 a          100 c          112 g          163 t
ORIGIN      
        1 tgccagcagg tctcagggct gaggaggctc tgagacaggg agcagcacaa aggagcaggc
       61 agagagacag gcacaatcgg ggtttcatct acctccgtgg atttctcaca ttacacacaa
      121 tgcatacttt acattttaca aaaccaagga aatgaaggga aatatatctg tcaccgaaga
      181 agacatcaga gctttatagc tgaaatgatg gatattttta gatgaaggtc tagtttaact
      241 tacttacatt aagggtctaa tctctgctga acaatagcta tgttagcttg aacacatagt
      301 gagaaatctg ttccattaat taagtgctgc ctgtactact cggatttgta gcaaatgtta
      361 atagacttcc tctgttggac gattacttta ttttgccaag ttgctaatgg attaaattga
      421 aaaggtccat gtgttagact ttagcttcaa agttctaaaa aatgccttgc atacaacaat
      481 ggaaaatacc tatgtattaa tattattaat gggccatcct caaaggcaca taagatacat
      541 gaaatcttag caaattcatt
//
LOCUS       KCPA01002699             760 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 296857tic ultra-conserved element locus
            uce-7078, sequence.
ACCESSION   KCPA01002699
VERSION     KCPA01002699.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 760)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 760)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..760
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="296857tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>760
                     /note="ultra-conserved element locus uce-7078"
BASE COUNT          196 a          155 c          162 g          247 t
ORIGIN      
        1 tttggacctc ttaacagtaa agatctcatt gaaggaggtt tttcagcaat ggccatgggc
       61 ctgcgagttt ggatcccgtg atgcatcgct ccttgaagtt acatctgctc ttctctttca
      121 tctctcctct tgttaactgg gagctgtcac attaggaggt gaattggtgg ctcctcccca
      181 cctcccagtg ccttttcact ttcttttagt gtgtaaattg ttggcagggt ggctgggccc
      241 ataaaaacgg gaatgcatag ggaacacaga ggggagcaca gttagaggaa aaacagtttg
      301 ggaattaagg tcattaattt tccactttca agggctgcca cacagacaga gataaagtca
      361 gcataaatat tccgctgaag tttcgctgtt tttctcctct cccttttttt ccattgccag
      421 cccatttatc tccatgctgt caattagagg caaaagcaaa gaactaatta ggaactgtgc
      481 aattttaatt agctgttttg ataattaaac taattggttc ccttgtgttt ccgcaatgtg
      541 cgcagagcac ttttttgata tctgggctgc agatttccca tccgttggtt aattagtcac
      601 ttttgcatta aaaaggagcc tttcttaata gccttaattt gcagttgaaa agagaatcta
      661 ccgtcaataa tttgtgtaat tggtaactgt ttgattgtaa tttagaagca cagccggaca
      721 gctctgcatg cctaattcct aatgactagg attaaagttg
//
LOCUS       KCPA01002700             617 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 296970tic ultra-conserved element locus
            uce-666, sequence.
ACCESSION   KCPA01002700
VERSION     KCPA01002700.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 617)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 617)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..617
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="296970tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>617
                     /note="ultra-conserved element locus uce-666"
BASE COUNT          218 a          113 c          101 g          185 t
ORIGIN      
        1 gtacctattt tacaaaataa aggcaaggca tattttatta tgtgccattc atgcttataa
       61 aaatataaac ttaaaatcct atgaaatgtt atataagaat attaacctct gcttcaatgt
      121 acagtttcca gaatctgcca gaactgggga actgggcaac aaggcgttca taggtcttcc
      181 gtgctttgtc tataggctga ttctaaaatc aaaacagcat tatgatttat gtaaatgaat
      241 tttactccag aaccaaatag tgtgagtgga ccatagataa ggaaatgtaa tcctatatca
      301 ctaaacctgt gcctctcgaa tgagaatgct ccaagcgtca aggtcatatg gattttcttc
      361 tagtttcttt tcagctttct tcactttttc tgggacatat tcagcagtct agaaaaatta
      421 aaaagaagac ataagatttg aaaagttcag ttacacagtc aagctaaaga aacattctga
      481 cctcagcttt caagataaca agttgtccca ggaagataat gcagcacaag ttctacatgt
      541 tatggatatc aaccagactc aatcaattca aaaaacatga aaacaaatct gagtttgcca
      601 gactgcacta cgaattt
//
LOCUS       KCPA01002701             655 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 297080tic ultra-conserved element locus
            uce-4560, sequence.
ACCESSION   KCPA01002701
VERSION     KCPA01002701.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 655)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 655)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..655
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="297080tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>655
                     /note="ultra-conserved element locus uce-4560"
BASE COUNT          191 a          119 c          121 g          224 t
ORIGIN      
        1 aattagatgg tttggctgca ctggtcatgt ttcagttacc tttggaagaa tttctaggaa
       61 ggaaagacac aagaacacag ttgctctgtg gtagctgctc ttttgtgttt cattcctgca
      121 atgtccttaa gcaaacattt tcctcctctt tctgtcaaac taaggaactt tgttagcaac
      181 actgtaggac aggagataac tatagagctc tctaattgtt aagctcttgc aagggctgag
      241 cctgatcatt cactgaattg ttgagttgat gggattcgtg tagctggtta taaattgata
      301 atctaaatta attcattcaa gcagaaatcg attttgtaac tccttgagag cttgtaataa
      361 tgcttacctc ctaccgttag ctgcattctc cgtttcataa agctggtcgg aaacagctgg
      421 attcaggtga cctgctagct cattaaatct gttacatgtt ccttctggta aatgatatta
      481 agctgaaatg tccttgcgtt gacctttaat tttatgacag aaataaccta atttgtaaca
      541 caaaataaca atctccttgg attactttgc cttgttaaaa tattttatgc atttttcatt
      601 tacacgaagg taatggaaaa acacttaaac tatctgttat ttaagccaca agaga
//
LOCUS       KCPA01002702             387 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 297184tic ultra-conserved element locus
            uce-6050, sequence.
ACCESSION   KCPA01002702
VERSION     KCPA01002702.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 387)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 387)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="297184tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>387
                     /note="ultra-conserved element locus uce-6050"
BASE COUNT          124 a           74 c           76 g          113 t
ORIGIN      
        1 gcaattcact tctgtgggat ctcttcccaa tccaagttag aaacatgctc tttgtgacac
       61 cacaccagaa tacagaagtt tcatggttcc caaggataat ctcagagaaa gagagagaaa
      121 gccagtgctt caatcaggtc gttcaaagag gataccactc ttataatcat aatgtatata
      181 cattataact tacatccaca gcctggttat aactaattct agcctggatc atctcaggag
      241 tgtctttaat actggtaaac ttcaaagcat atggatgctg acggtacttc ttctgttgag
      301 cagaaaaaga tcaaagctgt gaattttgtg ctgctctttc atgctatttg aaagagaaaa
      361 atcataggtt gctggagatt agagtga
//
LOCUS       KCPA01002703             590 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 297292tic ultra-conserved element locus
            uce-1825, sequence.
ACCESSION   KCPA01002703
VERSION     KCPA01002703.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 590)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 590)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..590
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="297292tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>590
                     /note="ultra-conserved element locus uce-1825"
BASE COUNT          210 a           88 c          117 g          175 t
ORIGIN      
        1 tgcgtgaggt aagctgataa aaactattgc ttgccttcac tgtctgtaaa aacattcagt
       61 gcttaaatgt gcagataaaa ggaaattgtt tttagaatgg tttggtacat ctgatggagg
      121 caacaaaata gaatgaaaat ttatgaatat catagatgga aaaaatgagg tcaagataat
      181 taaaagtctc tctgtcttcc aaagataatc taacttgctg ctcagtggct gtcacagtca
      241 tttcagggtt cacctatagt gtgcaatgcg tatgaactta attaagtact aagaggtaat
      301 gaattggaat tttttgctta gtactatttt tcttcatagc atgcaaaccc ataaatcgta
      361 caaagctgtc aaaaggaaat acctactcca ccagtgatgt ggaggaaaac agatgccact
      421 tattcaataa actaatatcc acacagaaga aaaatgttga ctagatacct cagagtcaaa
      481 gttggtttga aagtttgtca atacagaatt ttatggctgt gaactgagga tgaaatttag
      541 ctgaacaagt gaattaaaat ttcaggtagt ctgactggtg acacagtaaa
//
LOCUS       KCPA01002704             689 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 297402tic ultra-conserved element locus
            uce-6543, sequence.
ACCESSION   KCPA01002704
VERSION     KCPA01002704.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 689)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 689)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..689
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="297402tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>689
                     /note="ultra-conserved element locus uce-6543"
BASE COUNT          221 a          113 c          119 g          236 t
ORIGIN      
        1 aaagttagtt taagtgagca cttagggcta gaaaaattct gccttccttt gtgcatataa
       61 cttgagatac atctctgcat cctaataaga gcctgccaag tagacaaaag ccatgcggat
      121 cccaggatcc atgtgctgaa tacctcttgt gagcacctca gatgctctgt tgaggagagg
      181 tgtggtatgt ccatccagaa gcttagattt ccaattgttc tatactttat gtgagatttc
      241 agatttcatc ccttgtcaag acttcaaacc tggtctttta gatatcaatc aaaagcacat
      301 tttctaccct gtcctcattt acatttatct aatgcttaag gtcatttgtg atcatttgag
      361 tgtatttcag catatggaat cagtgaataa tagatttcag cctcacgctg tgaagaaaga
      421 ttgtgttttt acaagacatg atgttgttta ctgggtgtta ataatcacta attaataaac
      481 atatctagac gtcataaaat gttgcgtaaa aatgtcaagt gtttaacttc ttgagtgcaa
      541 tagcatttga ggccttattt gcataaataa aataattaaa ttacaaaata atgtgaagta
      601 ctatatgaaa acataagttt aattctacgt tcttttacag atttgttgta agtataaagt
      661 ttaataaaat gactattcaa atgactcta
//
LOCUS       KCPA01002705             679 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 297513tic ultra-conserved element locus
            uce-4249, sequence.
ACCESSION   KCPA01002705
VERSION     KCPA01002705.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 679)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 679)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..679
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="297513tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>679
                     /note="ultra-conserved element locus uce-4249"
BASE COUNT          194 a          158 c          161 g          166 t
ORIGIN      
        1 aaaggaagaa caagaattct caaaaaattt acattgactt caccactcaa accaggattt
       61 taatgggtat ctataaatgg attttaagta ggattttccc atgttttctc ccaaagctga
      121 tttaaaatct aatattatta gattggccac agccttcata ttttaactgt caaacccaaa
      181 gtctgaaagg tgattcattc aacgcttgct aaaatatttg ctcagcagca caatagtgtg
      241 tgatggaaaa taaactcctc tggagcatct caccctatca gccatggcct gcagcaggaa
      301 aagaatgagg gaaggtcagt caattatgtg tggtaatcac cgtaagcata ttatctgaga
      361 cacagatgtc ttccctgacc ccacacgaca tagctattaa ccccacagta gtataaaaat
      421 ggggaggagg aggagccggt ccccgaggta aaccagacct tttcaggccg ggcttgtccg
      481 gcggctcagc ggagttcggg cgctgctgcg gagctggggc cgcgctccgc gggcggcacg
      541 gccgcctctc ctcttcgggg acctttctat agacctagtc atgtgagata aatagttgca
      601 tcatcaaaaa tgggactggc aaattgactc gggagatatt tcaggagcgt gaacagccct
      661 ggaatgccag gcgctgccc
//
LOCUS       KCPA01002706             474 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 297617tic ultra-conserved element locus
            uce-3847, sequence.
ACCESSION   KCPA01002706
VERSION     KCPA01002706.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 474)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 474)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="297617tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>474
                     /note="ultra-conserved element locus uce-3847"
BASE COUNT          195 a           72 c           81 g          126 t
ORIGIN      
        1 taccataatc agaagcaaac aaaaaaaatc ccaattttaa agggacattt atctactaga
       61 ttgaactgtt tgcaaaggaa atttatgtgc caaggttata aagattataa aagacactat
      121 ttaattatcc ctcagttgaa caaagaagtc cagaaagagc atgatatggg actaatggac
      181 cagcaaaaat gcaaagtacc attcagcact aaagtaattg ggcagaacac agaaagagac
      241 caggataaat gattacttca ttaattttaa aattaaaggg caagataagg tggtcactat
      301 catagagagt tattaaggta aaactggcta atcagcacaa tttaaatgta aagaagtcat
      361 ccaacgccta ccaatttcag aagagcgtga aataaagcaa tttgatatag ctttatcaat
      421 caaaccatac agataatggt atagtctaag agttttctaa tttattgtag cctt
//
LOCUS       KCPA01002707             537 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 297728tic ultra-conserved element locus
            uce-3116, sequence.
ACCESSION   KCPA01002707
VERSION     KCPA01002707.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 537)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 537)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="297728tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>537
                     /note="ultra-conserved element locus uce-3116"
BASE COUNT          163 a          110 c           96 g          168 t
ORIGIN      
        1 ggtttttctt cccccggctc tttttccgtt tgcctacaca tcctccaagt cctagcccta
       61 gctcttaact gcagtccctg gaacaagagg gaaaaaatcg tttatggctt aaatcccaat
      121 ggctgatttt gtgtgtgtgt tataagaatg cacccacaac aacaaaaaag tcacttctct
      181 gtcccccacc gtacagcaga agaataataa aaaagcttta tatttttgca gtgggtattc
      241 aaagataatt tgatgccatt gtttctgcta cagatggttc tttttaatac aataacactg
      301 ctctttgtgc atactacaca caataaaaat cgaaagcgtt ctcctgaata accattttgt
      361 tctcgcttgt atacaggcca acaaaagctg ccgtgaggta atgggtcctg tttattgaag
      421 ccatagaata gaggtttgat aaagattttt gtatatgggg gaaaaaaatt aaaataaaga
      481 cctcgcaagg tcgagctgat ctctgcgtat ttattaccac tgaaatattt tatcaat
//
LOCUS       KCPA01002708             862 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 297836tic ultra-conserved element locus
            uce-3548, sequence.
ACCESSION   KCPA01002708
VERSION     KCPA01002708.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 862)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 862)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..862
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="297836tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>862
                     /note="ultra-conserved element locus uce-3548"
BASE COUNT          227 a          170 c          197 g          268 t
ORIGIN      
        1 aagtcaactt ctcacttccc agcatatgaa aaggtctccc gtgacaccta tagacctttc
       61 ataatggaca gattcttccc atgatacgga caaattgagt ttttcctggg aggtactgcc
      121 ccactctgag ctgataaagg aagacccagg aactataggt atgctgtgat tacttctttt
      181 gcactctgtg gtgttccagg agcttgtgca tcttctgctt tatgagatat acttggccta
      241 ggggagctaa gtggaaggat gagggagaag aggaggtgca taatggtatg gcctccagca
      301 ctgttattta tgacagtatc cttccagcaa tctgttcctg catagggtga aggcatggtt
      361 tcaattctgc ccttgaaaca tggattaagc aatgttgcta atacatattt gtccctgcgg
      421 ctgtcaaaca tttcactgat actagactct gtagacagct taatagctag gtcttctgtc
      481 aatgttactg cagcagtgtc tcctttgctt taagatgctg ttcagattta ttcaagcaat
      541 aggtgtagca tggtgcttgg taaatagctg cacctgactg tgtgcttgta tcatcactgc
      601 ttgctgacat cccaagtgac cagatgaaat ggatggacta gggaaaccaa gtgctgagaa
      661 gaatccagtg agtgaaagtt ggaaagatca tctgtctcgt ccctatttta tgtctcctaa
      721 cagagttaca tgcacaatgc attattattc tagaagtctc tgaacaataa ctactatcca
      781 cagtggctga aaatgtgtgt agccagcaaa atggttttgt tattgttgct agtgtgatgc
      841 tttcttgtgt tgatgtaatc ta
//
LOCUS       KCPA01002709             210 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 298041tic ultra-conserved element locus
            uce-7776, sequence.
ACCESSION   KCPA01002709
VERSION     KCPA01002709.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 210)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 210)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="298041tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>210
                     /note="ultra-conserved element locus uce-7776"
BASE COUNT           42 a           66 c           60 g           42 t
ORIGIN      
        1 aagctcgacc agggtgggca cggtgcgaga tgccagcagc cccgcgaagc cccgcgctca
       61 tgcggaccgg ccgtaccttt ctggagagga cgacttctca gagttaactg acatcagcag
      121 ctcagtcttc tgcttgattt ctggaaaaat cagaaaacgt tcacttccgg aggttccctg
      181 cgcccttttg tccgccggag cccgggacgc
//
LOCUS       KCPA01002710             695 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 298151tic ultra-conserved element locus
            uce-6664, sequence.
ACCESSION   KCPA01002710
VERSION     KCPA01002710.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 695)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 695)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..695
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="298151tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>695
                     /note="ultra-conserved element locus uce-6664"
BASE COUNT          195 a          128 c          151 g          221 t
ORIGIN      
        1 ttttctatag ggccaactca agaaatatcc aggtttgggg aaagagcaag aagggaagcg
       61 ttaccttctt ccttatctcc ttggaataaa actgtttcat aaatctggca atgtccagga
      121 aattcattgt gcctcagaaa aaaatttaat ttagtgcttg cctttggaaa actgtgctta
      181 acctgtaagt tgggctttgg gaggcagagg gtgcagagga attgctcagg aaagggtttg
      241 cagagcacaa atctgtttgg caaggaagtt gctgaaaact gtggagtgga tgctgcagag
      301 agtaccttta tgattgattt ccattcaagt cagactgact gcagtgtggt catttttcta
      361 acccataact gcacacactg cagcagtctg ctatctgcag ggtgtctgaa ttatagcagt
      421 ccatgtccct gttacctttt acacaaatta cttacaccgg tttctttttc catgcaaatt
      481 catcagtttt acagcctctt gtagctgctg tcaggaaact gttgcagaga taaaacgagt
      541 taattttact gtgcttaacc ctctgttaaa gtgtgcagga agcatatgat agttaagaga
      601 agataacaaa ggatttgagt gttcttgtca taaattactt cccaacttaa ttccttttaa
      661 tgatcgttcc agattttctc aagttttaat ggcgt
//
LOCUS       KCPA01002711             388 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 298257tic ultra-conserved element locus
            uce-4155, sequence.
ACCESSION   KCPA01002711
VERSION     KCPA01002711.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 388)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 388)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="298257tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>388
                     /note="ultra-conserved element locus uce-4155"
BASE COUNT          142 a           68 c           90 g           88 t
ORIGIN      
        1 ttcttttttt ttttccttcc aaggaaatat acagcttaag cacggagaca aggggtgcat
       61 gatatgcaga caggtgtaaa acatgaagta attatagaag ctcaaattag ttcctaggcc
      121 tgaggcaaaa aagagaacag tgccttgaca aaagggaata gcaaataagg atagcaaaca
      181 aaaaatggct tgaatgtgta aattagcaag aaaaatgaga cagaaaagca gctttactct
      241 actattattc accacatgag aacagagcag ctgaacatga tcaagagggc tttggaggag
      301 agaggcaggc atcaacaccg aaacgaagcc aaagagtggc agctccgcac tttctagtca
      361 gtcactcatt atgtggtgaa gtgctctt
//
LOCUS       KCPA01002712             679 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 298369tic ultra-conserved element locus
            uce-2560, sequence.
ACCESSION   KCPA01002712
VERSION     KCPA01002712.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 679)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 679)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..679
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="298369tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>679
                     /note="ultra-conserved element locus uce-2560"
BASE COUNT          164 a          124 c          150 g          241 t
ORIGIN      
        1 tgtatcttcc ttcatgaagt ttatcttctg tgcagggctg gctgtttgtg gtggctggta
       61 agtcacatac tttatggtac ttcagcaaag ctttcaaact ccttgacaac tttttaggta
      121 ggggttttta catgtctcag gcagctgagt gaatctggtc atcgtattct tgttttatta
      181 aagttacttt aaagtatggt gtcatagcag gcggtgtatt tatgagggtg aaactggtcg
      241 ggttttttta cactgtatct ctcctgcagc cagactgttg atctcctcat gcaagagtca
      301 ggatgtcgtt tagaacatcc ttcagctacc aaattccgca atcatgtcat ggaaggagaa
      361 tgggataagg taacgtaggg cttataggac tgtattaacc actgttgaaa tatctatgag
      421 agaattaaaa attcatcctc cttatatatt ttcttatgcc gatttctgca ggctgagaac
      481 gacctgaatg aacttaaggc cttagtgcat tctccgcatg caattgtggt aagaggcaca
      541 cttgaactct ttcagagctg tgtagttgga ctaattgtag tggtgtaatc tttccctatg
      601 gagttggttg tccatagttc ttgttttctc ttgtttactt taagctgctt gcatgctatc
      661 tcaaatgtca tactaatct
//
LOCUS       KCPA01002713             507 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 298477tic ultra-conserved element locus
            uce-2737, sequence.
ACCESSION   KCPA01002713
VERSION     KCPA01002713.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 507)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 507)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="298477tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>507
                     /note="ultra-conserved element locus uce-2737"
BASE COUNT          153 a          109 c           97 g          148 t
ORIGIN      
        1 aacctcaatg tgaaatcaat caggagagaa cacctttgct cagcacctgg aaatatggga
       61 gggtacaaac aatggtctta acaagctaat tgctttccca gcctgcctga agccggagct
      121 gttttacatt tcagttcatt tcgtcagaga gaaaaggctg aagtgatttg tggtggtctc
      181 aggagtctct gccagctatg atgtatataa aaggaatttt ttattccagt tgtaaccata
      241 ggcagtaatg tttatagtag gtgaacatat tagcctggac gcagggcatg aattttactc
      301 tagcaaaagc cagttcattt atacagccta agagttaaat gtcggtattt gaagacaaat
      361 tatagggaaa ttcatttaaa cccatgttat gtggcagaat ataaaaacgg acagtcctat
      421 ctatctttat caatttttta cagccctctt aattcacttc gcttccagca accccttccc
      481 cacaaacctc tcctcccgct agcacac
//
LOCUS       KCPA01002714             684 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 298587tic ultra-conserved element locus
            uce-4136, sequence.
ACCESSION   KCPA01002714
VERSION     KCPA01002714.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 684)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 684)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="298587tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>684
                     /note="ultra-conserved element locus uce-4136"
BASE COUNT          198 a          135 c          161 g          190 t
ORIGIN      
        1 acagaaataa tgtcaagcag ggccccttat ctcaggatgt tgtaatgtag ctgctgtaag
       61 ccctcgcctg gagacgagat aagcgcaacc ttacaagctt gtgggggagt gagaaccagc
      121 agtgccatcg ctgggacaac aatggcagag ctgtcactcg cacattatgg ctctttctgg
      181 tgccaaggaa agaaatgtat gctgagtggt gaataacaag cacaaaaata aaagtcccga
      241 atgttcatct aatagtgatg tatttgtaac gggattatac tgcccaatga tattctttct
      301 ttatctcctc actaaatggt ggggcagctg tgtgctttgg caaggcatga tatcctttct
      361 tttgtgtgct gcatattaat cctttattga agtaattaaa tgtgtgctta atggcaatga
      421 gctggcagaa tgaacgtaca attgaattag cagttatgat ggggaccatg ctacaagatg
      481 aactaaatgc aattactgta ggcatttttc tccaagtcga atctggctac atgacacgac
      541 ttaattacag gttgttagac acactgatcc tgtaggggag gcacagctca tgtacctgta
      601 acacacatac attcactgag aaattcagcc tggtctgaag gcagctcttg attgtgctat
      661 aaaccaggca atctgatgcg gact
//
LOCUS       KCPA01002715             791 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 298698tic ultra-conserved element locus
            uce-6929, sequence.
ACCESSION   KCPA01002715
VERSION     KCPA01002715.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 791)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 791)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..791
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="298698tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>791
                     /note="ultra-conserved element locus uce-6929"
BASE COUNT          229 a          133 c          127 g          302 t
ORIGIN      
        1 ttttatcttt tgagataaat atcctgctgg taatcaaaca ctgtaaataa aacttgtgat
       61 ttttagagat cgttatgcta attatcccct aaatctgagt tgtatgccaa actgtttaag
      121 ccatttaaga tcatactttt ctttgcatgt tgcaaattag acagttcatg gttatttctt
      181 agatatgttg atcataaagg gtatctaaca gattttccag tacttaactg taccacttgc
      241 ttctttctct tttcttcttg tctatgatgt atgattaatc atagattact tcattttgtt
      301 tcatttcatt tacaacattt atgagcttca ctttgtcggt atgaaatgct tgtccccttc
      361 tttcctttcc aaagtggcat aattagtgtt agcatctttt ttaacaggct acataaagtt
      421 tagtggctgg attaaatcaa gtcattaaca taatgtgcta tacaatttgc ccctatctct
      481 tttcgtttcc agtacatcaa agtgccacag agtgccagtg taattgggcc ttgctagctt
      541 gtcaggttca gtcaggctga tggctgctgc ttttactaaa aagcttccag gcatgataat
      601 taatagagaa aagaagtctg agaaatgtaa aagtttggac agttctctat gaatatttca
      661 tacatttgaa taatcagaag ttaacattat caatttgatg tataatacat tgattaaaag
      721 ccttgtttca gatcctcaaa atagacatca aaactgggaa tttgcatttt ctttggcatg
      781 gtctttatat t
//
LOCUS       KCPA01002716             569 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 298808tic ultra-conserved element locus
            uce-6219, sequence.
ACCESSION   KCPA01002716
VERSION     KCPA01002716.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 569)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 569)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="298808tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>569
                     /note="ultra-conserved element locus uce-6219"
BASE COUNT          209 a          120 c          136 g          104 t
ORIGIN      
        1 tgaagccccc ttcatctgga caaaaatcta tgctggaaaa attcaagctg gttaatgcta
       61 ggactgctct gagacctcct ttgtcactga gctcacgacc cagtgacagt gggagagagg
      121 atgacaattt ctcagagtgt ggtgaaatgg atgtcttaag tggtggggtg aacagcagcg
      181 gctccacaag tagcagtccc aaagtatcac cgaagttaac ccctccgaaa gctggcagca
      241 aaaatctcag caataaaaag tctttgctac agccaaagga taaagaggaa aagaacaggg
      301 acaaaaacaa agtttgcact gagaaagcag tcaaggaaga gaaggatcag gtcattgaat
      361 catctacaaa gaaaagctca aaaattgcaa gcttaatccc aaagggaagc aagacaacaa
      421 cagccaagaa agaaagttta atatcatctt ctagtgggat cccaaagcct ggatcaaagg
      481 tgccaacagc aaagcagagc gcttcctcca catgcacagg gagtaaggag gttgaaaaac
      541 tgaggactac aaaaggaaac cagtcccag
//
LOCUS       KCPA01002717             624 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 298918tic ultra-conserved element locus
            uce-1693, sequence.
ACCESSION   KCPA01002717
VERSION     KCPA01002717.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 624)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 624)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="298918tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>624
                     /note="ultra-conserved element locus uce-1693"
BASE COUNT          201 a          114 c          114 g          195 t
ORIGIN      
        1 aaaggagttc aacactaata aaaacttgga caaattaaat tgacaaagcc ccattacctt
       61 ggcaaaaagt ccctgtcaaa agataaactt taaagctaga atgcatgaaa gagtccccag
      121 atagaattaa aatttaaact gattcttgag agataagctt tttttaaatc cacctctttg
      181 ctgcaagtca ggattttttt cccctttaaa tctcttgagc gattttcatt ttttgcaagg
      241 ccgcactgct ggtgtcctgg aaaaatggag agttagagct ttatcagttg gtgccctgag
      301 gtatgtggca aagaagctaa atccttgaag attagcaaaa aaaatgcagc acatggcaat
      361 aaggggctta tatgactact agtattagtt caggtgaaag aagtattgct tatacataaa
      421 actggacaaa tccactgaca atgtattttt agttagctac aaaggagtct tatattgctg
      481 gactttacct ctttggtgat ttgggaagct tagtaatcca ctgtaaatgc tcttctgctg
      541 gccccaattc ccagtattac tctagaatgc tgctttttaa cccctaaaag tacatgtttc
      601 cttaatttag cttttagatc acaa
//
LOCUS       KCPA01002718             505 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 299016tic ultra-conserved element locus
            uce-5366, sequence.
ACCESSION   KCPA01002718
VERSION     KCPA01002718.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 505)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 505)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="299016tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>505
                     /note="ultra-conserved element locus uce-5366"
BASE COUNT          137 a          111 c          114 g          143 t
ORIGIN      
        1 ttttcctggt caataaatgt gatttcttct tttaaaagca gaagctaaaa gctctttaat
       61 gggagaggcg ccgcgttatt gtgtccacgg caaatccggc acaaagcggg agctcagcgg
      121 ggctccggca gggtgagatc cacacttaac ccctgcacac attgttgctc catttctttt
      181 cctggatctg tcaggaatgt aacaggccat tttcaatcta aatcttgtta tggattaata
      241 agcttattat gcaatttatc atgaggaaaa ttgcgcccaa ggctccacgc tgatcccttc
      301 atttattccc tgctctttgt cagactaatc ttcctgacag ctaaggatgg aatcacacga
      361 gcttgctgaa gatgtggtca cttggatcct gcaagtcggg atttacataa aacggggagg
      421 ctttgggaag ggaaaaggtg gtgatgcctc ctgtcacact aataactgga attcagacaa
      481 aaaacaatgg taatccaatt tgtcc
//
LOCUS       KCPA01002719             418 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 299116tic ultra-conserved element locus
            uce-7317, sequence.
ACCESSION   KCPA01002719
VERSION     KCPA01002719.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 418)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 418)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="299116tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>418
                     /note="ultra-conserved element locus uce-7317"
BASE COUNT          117 a           69 c           69 g          163 t
ORIGIN      
        1 ttttgtttcc tgttgaaagt acagtcccta cacaactcac agataatctt gtgtacacta
       61 tacaatttgt tatgcagtcc tcagctgaac ccctggatat gaattccgtt ctcattgtca
      121 gagtgttata gtagtattat atagaacttc aatgtctttg tggacattgt tgtgaaattg
      181 gtgacttaat gtctagctat catatgtctt tttgcaagac agttaggaac agtatgtaca
      241 gtatataatt gctaaatgat ttaagtatga cacttgcatt tgctgatgct taatgagacc
      301 ctattatctg ctctttgctc ctattacttt atagcctttt taatctatca agtatttaca
      361 gtgttctatt tttcacattt aattgatttt agggtataaa agatagcatt gcaatgca
//
LOCUS       KCPA01002720             704 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 299228tic ultra-conserved element locus
            uce-6636, sequence.
ACCESSION   KCPA01002720
VERSION     KCPA01002720.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 704)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 704)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..704
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="299228tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>704
                     /note="ultra-conserved element locus uce-6636"
BASE COUNT          220 a          144 c           94 g          246 t
ORIGIN      
        1 atacagagta tcctcaatgg atgtataact accctctcaa atggagtttc ctgatatttt
       61 aaatgaatgg tggggtttat tttggcagca gcatcacata actaatgctt catattacac
      121 acaaaaatga ttttggtgcc attccttaaa tgaaatgttt catttcaata aaagcttgta
      181 attgtaacac ttaaatgcta tcattaatag caaaaagaaa gttctcccag aaacattaaa
      241 gagtgaactt ccccgctctt tcctctatta cagccaatgt ctttttattg tctgttttca
      301 tctctatttt actttatctg ccaaactact ttgcatttca agacatttcc actcaccttg
      361 agttcttggt tcaaaaagaa acaataaagt ttaatctttt cacttgacaa tgatgtatgg
      421 gtctgttgaa aaacactttt caggtattat cattaaaaag tctctctagt ttctcttcaa
      481 ctcttgatac acagagaaat acaagatgtc acacatgcga gggtttttat caaagctcct
      541 aataatacca cttaattaga aaccaaagct cactaatgtt ccttctgaga gctcctcaga
      601 atagtctttc tctgactcta gtcatttctc ttcaactaaa cattgtctaa tgactttatt
      661 agtgatttca aaggctagca aaggctacca ctccactctt ttct
//
LOCUS       KCPA01002721             634 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 299337tic ultra-conserved element locus
            uce-4089, sequence.
ACCESSION   KCPA01002721
VERSION     KCPA01002721.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 634)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 634)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="299337tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>634
                     /note="ultra-conserved element locus uce-4089"
BASE COUNT          180 a          139 c          116 g          199 t
ORIGIN      
        1 tcctaggaag aaaacaaggt ttacttttga gatcacttgc caccttcttc cttaagaaac
       61 gcatgctatt aaaagcttca gtcttttatg gttctacaaa taatctttct gtttagaaag
      121 gcatgcattt tcaaacttta tcaggaacta caacctcaaa ggctgcggat tgggctctac
      181 tcccagaagt aaggggagaa tgtaacactc tctttattac taggatcagt caagatctgg
      241 ctctcatcgc acgggaaatc aacgatgtag caggagagat agattcagtg acttcatcag
      301 gcactgcccc cagtaccaca gtaagcactg ctgccaccac ccctggctct gccatagaca
      361 ctagagaaga ggtaggagat cttcatggag aaatgcataa ggttcttcct tttctttatt
      421 tcttttgctt tttttgcata gacttccact caacccgtat gcatgatctc ttttacattt
      481 caacaaacaa tccagaagtt attttgtgaa cacagcttgt caaaaggcat actgtctgtc
      541 tgtctctttt tttccacgaa acataggaca agatagttat ttgtttcttg cttgtctgta
      601 gccttagata ctaagtgcat ttaaagatac tagt
//
LOCUS       KCPA01002722             778 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 299449tic ultra-conserved element locus
            uce-6571, sequence.
ACCESSION   KCPA01002722
VERSION     KCPA01002722.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 778)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 778)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..778
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="299449tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>778
                     /note="ultra-conserved element locus uce-6571"
BASE COUNT          211 a          208 c          165 g          194 t
ORIGIN      
        1 aaaagcaagc gcctcattac tccccatctc aaccagcttt gacagaggca ctggaactca
       61 taagctgcgt tccactgggc agggatgggc tgttttccag ccatcccgca cgttcaatgt
      121 cagccattag ttcttcccaa tcgggcatca atgttcaaca cacacccgaa aaaatatata
      181 atactggtaa taataataac aatctgcagc ctctccgagc ttcaatactt gaagtatgag
      241 tcaaagcagc agtttcactt ttcactcggg aagctgacaa gcatgactag agggggaata
      301 aaataacatt cagttcgcat aaatatcaag cgggctgctt gagactgatg ggccaggaat
      361 gtattcttag ccatcattct ggcagacagg cccaaggaca ctcataactt attttacaat
      421 catttagttt cagctcaagt ggaaaacgtg acaacttatc tctgctgaca agatgccata
      481 tcgaacctta caattaactc tcccccgatt atctgcccag cccatcatta gctctgcggc
      541 tcttgatgga ctgcacgggc acagcttccc tcgatgatgg tcgtcatttg cagggtgcag
      601 agctccatta catgacactg aggacaaaac tcttcccttg ccacgtagct ggggggcaca
      661 gcctcatttt tgcaactgtt aagtgatgta cagcagaatg ctgctggaag catccttgcg
      721 tttcagccca cacctgctgc tgtccaggag cgagccagag atgcccatgc tctgtccc
//
LOCUS       KCPA01002723             723 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 299557tic ultra-conserved element locus
            uce-3353, sequence.
ACCESSION   KCPA01002723
VERSION     KCPA01002723.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 723)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 723)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..723
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="299557tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>723
                     /note="ultra-conserved element locus uce-3353"
BASE COUNT          235 a          144 c          116 g          228 t
ORIGIN      
        1 ttttcacttt gttgctaaca aatgctcaag cttcagacaa agcagtcagt agatgcattt
       61 attattaaaa caaacttctt taaaaattca aatcttgact tattaaaaaa aataataaag
      121 acttttatgt agtttagtat gcaagagtta gattgcttga cctctctttt aatgacttaa
      181 ttagctgtac taaagcccag ctgggcctct gctgacaaca tagctagata tttcaatcag
      241 gcagtgttat ggagaataag taataaatgc taccttgtcg ccatacagtc ccaaaccaga
      301 gtgcatgctg gtaatgctaa atttgatcag tatgcctcat atttcaatta gtcgtggtct
      361 gaatcactaa aactgtgtaa tgtgtatgaa ttcctgatat cagatacaga gctacaggct
      421 cccacagtta gaacccattg agtttgcttt tattagcagc caattaatgg ctaaaatctg
      481 cattgctttt aaaatttata acctctattc cagctgcatc catggttcct agtatactgt
      541 atacaatcag atccatatca ctgtcacaag ttaaacagct gcaaactgta ttctgtctgc
      601 agaactgcct tctatacaga agctttttta acctcttaga agttcttttc aaagcccagc
      661 agcaccagtc actttgcgac aatgagcgat ttaatacaga aagaaagaaa tctacaccaa
      721 ggt
//
LOCUS       KCPA01002724             701 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 299669tic ultra-conserved element locus
            uce-6351, sequence.
ACCESSION   KCPA01002724
VERSION     KCPA01002724.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 701)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 701)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..701
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="299669tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>701
                     /note="ultra-conserved element locus uce-6351"
BASE COUNT          213 a          124 c          150 g          214 t
ORIGIN      
        1 gcaataatta gacaagtgca cccttgtgac caagctgggg tttactgatg gtcactgtca
       61 cctcatgtat tcaccaccaa aacggaaact aaataaatgg ttttaaccaa gccctgggat
      121 aaaggctatt ttcaatttta cctttcacgt tttaattgta tagcaataat tttgcaatag
      181 agttgccgat ggcaaacatg caaaagacat taactttatt tatgttttgg attattaatg
      241 tggctgttaa aattcctcca gttagttttg attgaattgt ttttttgtgc gattctgtcg
      301 tttaatggag cggtaaataa gaatttctga taatgagccc aagcatctgt cacaacaacc
      361 tggcgctggt tattaacatt tccattaacg gcagggtggg cagtgataat atggaaacca
      421 cacagttaga acaaaataaa tagttggtgt caggctgagt gggtgttaat tactttttta
      481 ttttataact ctagggagta ttggtagaaa agtgtgactt atgaaggtca ttctctctta
      541 agaaggaagt ctccagagga gcagctaacc ggggctatcc actgcaagcg gtgaatattt
      601 catcgcttct atttatggcc cagaaagggg cagagagaaa agagacaact ttctcacacc
      661 atgaacacag agaaaggaca agtgtacctt tgccctgcct t
//
LOCUS       KCPA01002725             486 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 299781tic ultra-conserved element locus
            uce-7721, sequence.
ACCESSION   KCPA01002725
VERSION     KCPA01002725.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 486)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 486)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="299781tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>486
                     /note="ultra-conserved element locus uce-7721"
BASE COUNT          135 a          122 c          114 g          115 t
ORIGIN      
        1 aaaaaaagcc caagctctca ccttcccttt gaaatctttt cctgaccagc tctgttgtcc
       61 gtttttgtga taaaaaaata ataaaaagca ttcctggctg tttaaccgag agaagcccta
      121 attgattccc acagtcatta acctgcattt tacctcggag agtggtagtt aaggaagtcg
      181 gcactgctat ttataactca tctcaaattg agggcagact gcctaaaatc taacacatcc
      241 cagctgtact cctgtttgaa ctggggccaa gggaattttt taaagcaatc ttggcactga
      301 atgaatgaca ccaacagtac gagcgcgtgt ggttgtgttg tggtgacgta gcgctggagg
      361 tggaaggagc tcagccccga gccggagccg cccacccaga accaaacaca ggaaacgtct
      421 tttcctgtgc aagcacatgg caaaagcaaa gccatccctg gccacgaggg cttggagccg
      481 cgccgg
//
LOCUS       KCPA01002726             835 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 299892tic ultra-conserved element locus
            uce-1363, sequence.
ACCESSION   KCPA01002726
VERSION     KCPA01002726.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 835)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 835)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..835
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="299892tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>835
                     /note="ultra-conserved element locus uce-1363"
BASE COUNT          294 a          139 c          168 g          234 t
ORIGIN      
        1 tgatgcttga accaccttct caactaatgg ttatttatac acagctccaa gtctgtgaaa
       61 acaaacagct tagaagcagc agatctctaa aatttgcacc atttagagag gaaagacctg
      121 ggtgaaaaca aatggtgtat gttttcagcc agaaataaat aaggcatgga ctatggctct
      181 ctcatctacg agtgagtttt attaaagagt tagagcaagc tccagtttac aagatattca
      241 gaaccatatg tatgcattaa ttaaaggaat gtggaggagg aggaggggat ctgagaaaat
      301 aacaaagcag cagtgtatgc gtgcaatgat ttttcattct gtttcgcttc agctctgccc
      361 ctgcaacaga ggatctaatc aatctgccgg ctattaagtt tgttaattga taatgcatac
      421 taattaggct gtgcgcagtt acttaagaga ctttgctaag gtgattgtag gcacaagtcc
      481 aaatggagtt taaagtattc tgtgtgaggt taaaacccat caaccagaat agatggattt
      541 tatattataa cagaaggcac aatataccca taagtattta atgtattgca tagttatcca
      601 ttgttactcc taagtctacc aaacaattaa aaaaaaaata gccactaaaa aaggtacctg
      661 tatgaatatg tagagatagt agagatgaag ggaagctgaa agtgaaccag ccttaaaata
      721 actattcatt ttcacactta tgtccaggaa aaatagtatg tcgttctgtt gcaaggaagg
      781 agcaagcata acaagaactc agcctaatct agctttatga actttgacaa taagc
//
LOCUS       KCPA01002727             555 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 300001tic ultra-conserved element locus
            uce-4396, sequence.
ACCESSION   KCPA01002727
VERSION     KCPA01002727.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 555)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 555)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="300001tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>555
                     /note="ultra-conserved element locus uce-4396"
BASE COUNT          210 a           97 c           89 g          159 t
ORIGIN      
        1 aaaaagactt aattaaaaac acaagatgaa ataaatattt taggcaacca gcaacaaaat
       61 gggaaaatac catgtgtttg gagttttagt gccctctgag tgctggaatt tatttgcagc
      121 aagcagaaaa tagacagcaa gcataaaaat tcagcagatt cccgctagta aaattattta
      181 tcaagctaac aagggaggaa cccttctagt agcaacaagc cagcaaggaa aagacgtgcc
      241 tttatatttt acctttgggt tagcacacca gtaaaaatgc caactgacaa gcacttcaca
      301 taaacatttc tttctaaatg agctgccttg ttagtaagca aaggagcagt acagtcaaca
      361 gacagaggat gaatactaca ttgctgcata ttacaggaaa atataaataa aaataatgtt
      421 gatgcataaa tgactttaat gaattaacac ttcattttgc atttaaatta actgctataa
      481 atctatctta gcttcaatct ttccaagata gaatacatgt cagttatcta ttatttacat
      541 ctttcttacc tctgg
//
LOCUS       KCPA01002728             750 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 300113tic ultra-conserved element locus
            uce-7869, sequence.
ACCESSION   KCPA01002728
VERSION     KCPA01002728.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 750)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 750)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..750
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="300113tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>750
                     /note="ultra-conserved element locus uce-7869"
BASE COUNT          208 a          138 c          150 g          254 t
ORIGIN      
        1 attccatccg ttgaaggctt atttagttct ctttctcaag agcacagaaa ggactaaaat
       61 gaatctgaga ctgtttacag ctaggtttct tatgacccag gtcatattgt tgtcttgaat
      121 cagttttctc ctcatcctca actgaaaact tcttaatctt gcagggttaa ataaaaggag
      181 gaatgcagtg cagggaagat tccttttatg caaggcgagg ggatgactga aagtgcctgt
      241 gggcatttgg tccccattgg ctctctcagt gaatgcaatg atgcccacgg atagcctgta
      301 ttgttgtcag ttaaatggga tcatgagtgt ctgaaaggtg tttgagaatg aactgaaaat
      361 cattttcaca agtggatgat tacttctgcc acatgttaac cgaactctat cagagtggcc
      421 cagatttttg agactgcatt aattgctctt tcaaccttga ctgaggtttc tctttaagaa
      481 aggcctttgc tggactaaac tgctacacgt attgattttt ctttctatat ttttttcatt
      541 gtttgtgata aatgaagcct tttacaagta gagaatttat cattcaagat gtagatagat
      601 tgcttcattc cttagaataa aaaggctggt ctaaaaatga tctctgtaga aggagtaagt
      661 ccattctcat ttctccctca ttgaatagct ccggtattcc acacacaatt atgctttttc
      721 agctattcat tagtgctgac atcaaaatgt
//
LOCUS       KCPA01002729             507 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 300217tic ultra-conserved element locus
            uce-4632, sequence.
ACCESSION   KCPA01002729
VERSION     KCPA01002729.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 507)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 507)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="300217tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>507
                     /note="ultra-conserved element locus uce-4632"
BASE COUNT          162 a           93 c          113 g          139 t
ORIGIN      
        1 gaccaccatc tcttagcatc tggatttccc ccgaagcttt aaatcagggc agaggacttt
       61 gcatagtgca gtgtgctaca accacttgat ggcagccttt gatttggtac acgcctcatt
      121 agcaggagcg cagtgcagtg tggctgtagt atttgtaatg gaataacacg taagaactaa
      181 agactgcaag gtatctggtt aatgtagaga tgaaatgaat gaaacagcaa ggctaagctt
      241 tcctgaccct tcatgagaga atagatgaaa aaaggaagaa tgaggtattg tgccgaaggg
      301 agatgatgaa attcaagatc cacacacata atctctggct cagcctctga aatgttaatc
      361 cctggctaga attatttgag ctgtagattg caatttatca tcaaaatggc actgtgtcaa
      421 acaatacttc ttgtatgtgt gatgtttaga actatccaat tttaatacaa aatggttcac
      481 agaccagtgt ctaacatata agtagcg
//
LOCUS       KCPA01002730             610 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 300328tic ultra-conserved element locus
            uce-5586, sequence.
ACCESSION   KCPA01002730
VERSION     KCPA01002730.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 610)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 610)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..610
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="300328tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>610
                     /note="ultra-conserved element locus uce-5586"
BASE COUNT          155 a          145 c          156 g          154 t
ORIGIN      
        1 ctcactgtca aaatacctgg taaagctgtc ttgttgcctc tctctctgct tacaccttct
       61 gttctgctgc tccccttcag cccactctct atgcatctaa tggaggttgg taatcccgtt
      121 aggtgcttgc agcgggtgct gccgaatttg cttgcaaacg cctgtgccag gtcgagtgtc
      181 attgccagca gcactcttgg cgggatgaag gttgcattag cgaacagtaa ttgaaatgca
      241 aaataacatt ttgatcgagc gagcaggctg tttatttatc agatcaatag ccaaaatgcc
      301 ccatctggag aagtcagcgt gataacaagt gatagcattc caagggcaaa gggaacaagc
      361 acagcgggga ggacaccgtc agggtgggct cgtttcagtt gggtcacacc aggccgtcag
      421 ttgctgaaat ttttgggtcc ctactttgaa gaggaccccc ctcctagttg catcagcaaa
      481 ggtttccaga cctctggaaa gagaacaagc ttaaatatgg gataggacag attgcagaca
      541 tatgtaaagt gaggtcttct tcctcccatg gacagacgca ggaatgtgcc tcaaggtgca
      601 gactgcagat
//
LOCUS       KCPA01002731             822 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 300436tic ultra-conserved element locus
            uce-1576, sequence.
ACCESSION   KCPA01002731
VERSION     KCPA01002731.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 822)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 822)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..822
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="300436tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>822
                     /note="ultra-conserved element locus uce-1576"
BASE COUNT          270 a          162 c          140 g          250 t
ORIGIN      
        1 aaggcactat tacacattga actgattatt gttgtttgtt gctgttaaca cagacaagaa
       61 accctcctgg cagggaaaca acttctttgc taataagtat tcataatttg tatctcagca
      121 aaagatgtaa acatatatta tcattaaata ggctgtaatt ttaattgcct ataaatgtta
      181 ttaattctga ttgtgattat tcaataggta ataaagataa aggctgtcaa aattaattaa
      241 gtacatattc attaaattca aggtagcttc agtttcttta ttgcacaaat acaattaaca
      301 cttaatctga atcccagtaa gttacataat catgtgactc aaaataaagg gaggatacaa
      361 ccttggcctt ttacttttta catgggaaaa cattaatgat gctgacattg gagacaatta
      421 gacagtgtcg gccaattgtt tttagtcagc tttctctcac atctgtggtg tctacaagca
      481 agaagggcca ttgtttctgc aggcctccgt cgcgctttgg ctctttgtgc taaccgtcaa
      541 tctcttgctg aatatcaaag ctgtgaggaa attagaacag accagctcta ctgcaccaca
      601 ctaaagctta gcagggtgca tccactatgc tactaattag gcagtggcca acaaaataac
      661 ctgtcaatgc gtgcttgcca tttcccacac acctgcattt catacactaa taagcgtaca
      721 gccggggaga gaaaggaata actgctgaag tgtgaaaaat gaacaaaata taacaatgtt
      781 tctctcccca cctatactac tgccaattac catttaacat ta
//
LOCUS       KCPA01002732             650 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 300542tic ultra-conserved element locus
            uce-3978, sequence.
ACCESSION   KCPA01002732
VERSION     KCPA01002732.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 650)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 650)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..650
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="300542tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>650
                     /note="ultra-conserved element locus uce-3978"
BASE COUNT          197 a          121 c          140 g          192 t
ORIGIN      
        1 atcctgggga tgttcggcat ctgaaacatg tccttgaagt agcatacata aaaggtgggt
       61 ggatactccg aaaagcctgg aaaatttaca ataagtgcta tacggacatt aatacacttc
      121 aggaaatata tcagaagaaa acaactcagg aatccttgtc ttctgatgct gcaaatgata
      181 atcatattgc tgcagaaggt gtaacggagg attcgctaaa cagactgaaa ggtgctgtta
      241 gctttggata tggacttttt catctttgca tatccatggt gcccccaaac ctgctcaaaa
      301 tcatcaacct gctgggtttt cctggagacc gcctacaggg gctttcctca ctgatgtatg
      361 caagtgaaag taaggacatg aaggcccctt tagctacgtg agtagctata ttgaaatgct
      421 ttggtagata acttagtact aaaagtaagt aactaaaagt caaaaccaaa aagtcatgtt
      481 gctttggaaa caacagcagg ttggtagttt ggccatggtt tagtaaactc atcacttact
      541 gtctgctgtt aattatttac acgtatttgg ggttttttgc tgtattgttc agtacctgcg
      601 gttctaatgt cctgtaattt aaatgccagc agagtaaata aaagctccct
//
LOCUS       KCPA01002733             874 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 300653tic ultra-conserved element locus
            uce-2940, sequence.
ACCESSION   KCPA01002733
VERSION     KCPA01002733.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 874)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 874)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..874
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="300653tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>874
                     /note="ultra-conserved element locus uce-2940"
BASE COUNT          284 a          159 c          193 g          238 t
ORIGIN      
        1 gaaaaatgtt tacattctgt ttaagaaaga agacatcttt agagctttta gagtccatta
       61 caaaaacagg aaagagaaca tttagtatta ctgatattca tttttaaaat tatgataaat
      121 actcataaca tagttttcaa aaacacttta aatgtacagg catgctggtg atagctgtct
      181 atattactct gttaaattta tacaaagtct gcctgtgata gataggtatg ctagttttaa
      241 atcctttccc ttctcttttt aagagagtca gttttggaac agctgtaaat tagtgatgag
      301 ctattagtga gctgtgtcat tatttaataa aaatggcttc tctcacctta ttttttatcc
      361 aggtccctga caggctggat gaaatgagat ccccatgtag caattgccat ggaaacctgt
      421 gactccccta ctatctcaag gcaggaaaat gggcagagca catcaaagct atgtggaacg
      481 acacaacttg ataatgaggt gccagagaaa gttgcaggga tggagcctga cagggaaaac
      541 agctctacag atgacaacct gagaacggat gagcgcaaaa gtgaaatctt gctgggtttc
      601 agtgtagaga atgcagctgc cactcaggtt acctcagcaa aggagatacc ctgcaacgaa
      661 tgtgccactt cttttcccag tttacagaaa tacatggaac accactgtcc taacgcccgc
      721 cttcctgtct tgaaggacga caacgagagt gaaataagtg agttagagga cagtgatgtg
      781 gagaatttaa caggggaaat agtttaccag cctgatgggt cagcatatat aattgaggac
      841 tccaaagaaa gtgggcagaa tgcgcagact ggag
//
LOCUS       KCPA01002734             603 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 300766tic ultra-conserved element locus
            uce-2815, sequence.
ACCESSION   KCPA01002734
VERSION     KCPA01002734.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 603)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 603)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="300766tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>603
                     /note="ultra-conserved element locus uce-2815"
BASE COUNT          227 a           97 c           99 g          180 t
ORIGIN      
        1 cctacaaaca aatcagctta agcctaatgg aatcttattt ctatgcatta atatacaaag
       61 gaaacagttc agggtaaaca gacttgtagt atacattgtt tagagactat tgactttcca
      121 attagcctgc ttttcaaaca tttcacgtca aaaatatagt caaaatgcaa atgcagcata
      181 aacggctcta taataaatgc tcattcaaca tttattcttt ctcaaatcat cttttaaagc
      241 tctttcatgc taatgtctag aagatgtgac attagaaaaa ttgctttgac atgctaaggg
      301 gctccaagat taacaaaaag agaaagaaca agataaagct ttcaaaagac ctatttcaga
      361 ggaattatta cttcctttga aagtcttcca aggttgcagt gcatttaagc ttgttggcat
      421 acatgtaaat gaaggactac aaaagtattg cactaaatac aactggaatt aaaccttcag
      481 gctaatgtta aggaataagg ataaaggcca gatcctaggc tggtaacaac tcatttaaat
      541 taaagttctt tatttgagga tgtgagggag aaaaatcaat acaagaagtt ataaatgtaa
      601 ttc
//
LOCUS       KCPA01002735             484 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 300874tic ultra-conserved element locus
            uce-6943, sequence.
ACCESSION   KCPA01002735
VERSION     KCPA01002735.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 484)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 484)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..484
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="300874tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>484
                     /note="ultra-conserved element locus uce-6943"
BASE COUNT          157 a           96 c           93 g          138 t
ORIGIN      
        1 tctgaaatgg tataatgttc tctatttcta tcatgtgggt atcagttcca agttggaaac
       61 cagccttctc tcataattca agctggggct atactgatgc aaaccttctc agatattata
      121 agccagtatg agctcaaaaa aagaattcac tgctcaaggc caaatagctt caaagctaac
      181 aatcctccag aggcagtgtg aaagtgttga aactgtcaat gtcaacttac accatgcata
      241 gtgagtgtaa aacttcaata atgacatcat ggagaaaagg acaaagggca ggcactacac
      301 agaaaagtgc cagtgctctt caaatctttg aaaccttcaa ggatttatct ggactaacac
      361 ttctacacat agtcattggg gtcttaggct atactgatta aggatttagc ttattcaaag
      421 gctctcactg atagcaagga tgacaaggtt tcagcagtta tattggattc cattagcttt
      481 cact
//
LOCUS       KCPA01002736             322 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 300974tic ultra-conserved element locus
            uce-7691, sequence.
ACCESSION   KCPA01002736
VERSION     KCPA01002736.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 322)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 322)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="300974tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>322
                     /note="ultra-conserved element locus uce-7691"
BASE COUNT           99 a           68 c           49 g          106 t
ORIGIN      
        1 tcttagtatc ttggtatttg cactccgttc ttctaacgaa agacaatttg cgcatgtgca
       61 ctcttgctta tcacctcatc tggcagcagc tttccggtcc agcagacact aacatttaat
      121 gagacaaact tcccattttc agactaatca gtcggctgca ctaattgcaa atgcaaatat
      181 gcaaatttat attaattaat tactctgcta attagttctg cagtcttttt ggggtaataa
      241 atcattgtgc attggaaggg aaacacatcc tgtcccattt cactccacat aaaaatttaa
      301 tgtactaatt gaagaaaata ta
//
LOCUS       KCPA01002737             706 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 301085tic ultra-conserved element locus
            uce-7372, sequence.
ACCESSION   KCPA01002737
VERSION     KCPA01002737.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 706)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 706)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..706
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="301085tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>706
                     /note="ultra-conserved element locus uce-7372"
BASE COUNT          190 a          173 c          150 g          193 t
ORIGIN      
        1 acatatatca ccaccaacca gcatgtaaat tttaggcagc tactggacta gtcttttaaa
       61 gaagttgaaa aatggccctg agtcctcaaa ggacacacct gttatctgaa acagttttta
      121 accagcttgt taagcagctt tgacagatca aagaccctgg acaatgggca caaactttaa
      181 caatagttta gccttgagca aaagcttctg tcaaagcaag gcttgtgcca gtagtattat
      241 ggcctgcaat tgaaaataaa ttttacttga ataagtacct cagcccgatc agaggcactg
      301 ccgccaggga gacaaaagca gttggggata agttattgac tccactgaca gcatgaatga
      361 agttcattat gccagcccac tcttggtaaa tgtgtcaggt tttaaactga attaggtggc
      421 aggtgcatgg accattttcc tgcccccctt gagacagtag agggccagtc atcacctgat
      481 tctacagaca aatgtttaga tttggttttc atatcgcatg ggtacaagtg acagcatatt
      541 taaatcataa ataaggtttc ctgaaagccc ttgtctatcc cactttctct ctctgtcccc
      601 tgtcgctggc tggcagtgct cccacctcct tgcttgctgg accctggagg tgggtttgcc
      661 acccctacac ccccccttct gctcctatct gccttgggac gggcag
//
LOCUS       KCPA01002738             758 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 301194tic ultra-conserved element locus
            uce-4303, sequence.
ACCESSION   KCPA01002738
VERSION     KCPA01002738.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 758)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 758)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..758
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="301194tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>758
                     /note="ultra-conserved element locus uce-4303"
BASE COUNT          268 a          113 c          184 g          193 t
ORIGIN      
        1 tgtcccaatt ttaatgcctg agaaaagggg gggtggggaa ggctgtctca ctgaaagaaa
       61 attaatttgt tttattgggc actgaaaagc caagcctttt gtcaaacaga gaagcaaaca
      121 catatttgga gggagagcta ggtcactagt taaatgtcaa ggtctgctaa aatcaaaagg
      181 taggaggggt gggtgacaat gaaatctaag tagaaaacca taaatgtaaa gaaacaccat
      241 gatttctggg ctggggtgga atgagaaaaa tggccaaaga caaagatagg cagcctgggt
      301 ctggaagtaa ttacagccaa gtgaagacaa ctgaattcca tattactttg gtggatgtct
      361 gtaaaggcag tttggggagg tattttggta aggtttactt tttggagctt agcaacataa
      421 atttgttgtc actgaactat taaataaaat agacacatgt tggcaaagag tgcacagccg
      481 agggatggaa ctgattaagg gacagcctat gaaataatag cttaaatggg cccactgcag
      541 gattttaata tcccatgaca acactcaatt gtcaaattct gctggagtgt ccaggatgct
      601 actaaaatta agccagaaat tcctagattt attctataca gctaagaaca ggaaatgcca
      661 gtaagctgtg agaatcggag caagaaacaa gaaactggga agaaaagagg ataaatttta
      721 tgagatttct gccattaaat ctataacaaa tgtctttc
//
LOCUS       KCPA01002739             601 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 301296tic ultra-conserved element locus
            uce-7924, sequence.
ACCESSION   KCPA01002739
VERSION     KCPA01002739.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 601)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 601)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="301296tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>601
                     /note="ultra-conserved element locus uce-7924"
BASE COUNT          136 a          125 c          115 g          225 t
ORIGIN      
        1 gtggaagaag ggagtcatgg ttgggtctgt gctgaagggg catgtgtatc tctgacgttc
       61 ttgtttgagg gaagcacctt gatgagcatt tgaagagtaa gtattgcact gttttaattt
      121 tgcttcaggt ctggataatg gagggttgaa gttaatggct aatgggaaga gtaggcagct
      181 gtttctttac agtctagatg gcatggttcc ccatagagtc ctggtcatat tgtcctcttt
      241 ctcactttgt gtgtctcagg tgccccacac ctttttttga aaaactaaca ctagatcatt
      301 catgcaatgt gtcattttta ctaaccaact aatgtactaa caccctaacg actcatcttt
      361 gcttttagtt attttaatta acaatcgttc tgttcacgat tttttaattt cctttcttcc
      421 cccttttccg caaagcactc aggcattgga cacgctatgg taaacaaact acattgtctg
      481 gtagatatca ttcttattgt ctcttttttt gggtttgccg tgtgttacct gccttttcct
      541 ccccctaccc actcttttac tgcttccttt acttttattc taatttcatt gaaaacacat
      601 t
//
LOCUS       KCPA01002740             616 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 301407tic ultra-conserved element locus
            uce-4932, sequence.
ACCESSION   KCPA01002740
VERSION     KCPA01002740.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 616)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 616)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="301407tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>616
                     /note="ultra-conserved element locus uce-4932"
BASE COUNT          217 a          109 c          106 g          184 t
ORIGIN      
        1 ttcagtctgc catcaaatgg ttttatttct ttacattgac aggaaagaaa ttttaataca
       61 gtactgtgta tttactttat ctgcttgtct ttacaaatca ctctacaatc ccggggtttg
      121 gtatgagaca gagagagaga gagagcaaga agtagtattt atagtaaaac atgggtagtc
      181 aatagcatgt gggaaaacaa ctgaatctga aaatggtccc aaaggtaatt tgcaaatctg
      241 ctgaaatccc gaacaagctt tgatttaacc gaagcttgaa atggctttta tttactgtct
      301 attgtggaat aaatgacatc tcataaacag gctttatcca ttaccacaga atggcgatca
      361 ctatgttagg gacattttat cctcttgata taaaacaaga tatgctatag tgtgttatta
      421 caaatagaaa aatcaatgcc gagacacaca cctctgaaat ttcatttttg cagaacccca
      481 ttttcaaaaa atgtattctc taataaaaac gtctccataa ccagggggat ttacaaaaca
      541 ctgagcaaca aagaacaata acaaacaatg aataaagtgg ctccatcctg agtctttttg
      601 ctgtacatta gtcaca
//
LOCUS       KCPA01002741             421 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 301512tic ultra-conserved element locus
            uce-3337, sequence.
ACCESSION   KCPA01002741
VERSION     KCPA01002741.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 421)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 421)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="301512tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>421
                     /note="ultra-conserved element locus uce-3337"
BASE COUNT           94 a           84 c          117 g          126 t
ORIGIN      
        1 ctgtaacaga ttacatgatg tattattgtt atgtgagtca tgctttaaat gtctgttgtt
       61 tggagctgta ataatcgttg atccatccaa taagacctac ggtattggtg tcaaaggaaa
      121 ttaatttcct ggctggcttg tgtttttctc tgaggcagat attgatgagt gtgcagaggg
      181 gatcattgag tgtcacaacc attcacgctg tgttaacctc ccagggtggt accactgtga
      241 gtgcagaagc ggtttccatg acaatggaag ctattctcct tccggggagt cctgtgttgg
      301 taagcaatga tctgtgcatg gtgttcccaa gtgactgtgt ctcaggccag aagctgcgct
      361 gctccgttta tcagagcaag gggctgcaga accgggcttg ctggggagca tcgctggcca
      421 c
//
LOCUS       KCPA01002742             703 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 301620tic ultra-conserved element locus
            uce-3393, sequence.
ACCESSION   KCPA01002742
VERSION     KCPA01002742.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 703)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 703)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..703
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="301620tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>703
                     /note="ultra-conserved element locus uce-3393"
BASE COUNT          203 a          150 c          121 g          229 t
ORIGIN      
        1 ctgttttaga aattcagcac caagtgcctt cgtttctatc aactctgcag cttactcaca
       61 cttccagatc aacctaaaag gaaaaaattt aaacccagtc tttttaccca aatttctttc
      121 actcttctga gtggagcctt tccttctagg tcacgtaagc actaggtgac tcatgaaaac
      181 catgtgctgc attcatacta cagataaaaa ttaaacttca ctttgtaaca tttccagttc
      241 attcacaaac acaggcatta actccagtca ggagagaatt gaggctttgt cattcctttt
      301 ttattgttgt ggattagtgt ttcttttaaa tgaaaacagc ccctttgggt tgcttgcctg
      361 gttagccatg gcaggaagac aaacgatttt tacagtatca gacatgcggt ttcctgtctg
      421 tgtttaactt tgagcagaac atcacagcca gctggtctat ggctcctcca gacaactaga
      481 taatagcctg taataatttt gcctttggaa tgactgtcat ccacatctat tctgtacatt
      541 gtttcttgta caccagaaca agaagcagtg gttttgcgca ttctatagtt ttagagagca
      601 agacaagagc tactctgaaa aagcctgatc aaagggtgat tttaataatt tattagcaga
      661 aactgagata tttttcacct gttaatcaca gctttccttt caa
//
LOCUS       KCPA01002743             581 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 301731tic ultra-conserved element locus
            uce-7222, sequence.
ACCESSION   KCPA01002743
VERSION     KCPA01002743.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 581)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 581)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="301731tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>581
                     /note="ultra-conserved element locus uce-7222"
BASE COUNT          174 a          124 c          114 g          169 t
ORIGIN      
        1 ctgacacagc tactaaaatt atatattctt tactgctttc taagaagatt actaagccag
       61 ctgacccaaa cagtaattag acatcattca aaattaataa ccactatgat gacaacaaaa
      121 ttcttctgat ggaagaatca ttttaattaa tttaatcgtt gttgaaagat cagctgtgca
      181 cagtcctgct caccagtggg gcccatttgt ccctgtctgt ccctgtcacc taaagccagt
      241 gaatatgatc agtagccagc acttagggaa caataagaaa cagattgtac tgtcaggctt
      301 cattaaagat catcattagt attccaattc ggaaacagtc cgaacctttt atcaattctt
      361 ttcagctgct ggttcagctg ctaaacgtaa gttgggtctg gctgatgcct gtcagggagc
      421 agcttaagct tgggggttac gcaaccaggc tctaaatgat atcatgtgca gctgctagag
      481 tatttacggg caatgaaact tccttaaact tgaagcttaa cagcgacgaa tggaaatgaa
      541 atggatatgg cactttcttt catccctctg ccgagtggtc c
//
LOCUS       KCPA01002744             533 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 301841tic ultra-conserved element locus
            uce-2419, sequence.
ACCESSION   KCPA01002744
VERSION     KCPA01002744.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 533)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 533)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..533
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="301841tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>533
                     /note="ultra-conserved element locus uce-2419"
BASE COUNT          147 a          117 c          101 g          168 t
ORIGIN      
        1 gcttattgaa agaaattact cagctaacta aacttgtata tcttcgagtc agacattttt
       61 tcggcatctt taccccattt atcaatgcac aattactgtc agtattgtgt tgtgtcatta
      121 ggcgtaaggt tacaagtgcc agtcggaata aaaaaattgc agtaatgttg gcataatttt
      181 tcattatcat cttcattaac cacagctagt gggagtaaga gtttatcctt gctgttgtca
      241 ttgtcatgac aacgcttcca aagcttgtct gccgagagtt caccagatac aaaaaactga
      301 atgtcctcat tattccactt ctcacactct cacccatgcc aagggtgatc tgagatgcac
      361 agggcccttg atttatcccc tgtgatttct cttgacagcc tggtatggtg tctcagctta
      421 aggcaatcgg tctgatttca cagtttaatt actgctaatc tgaaggagcg tggccaatgc
      481 taatgagcca gcagcaatca aagcagtaat ggctaaactc accctgtttc att
//
LOCUS       KCPA01002745             481 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 301952tic ultra-conserved element locus
            uce-3733, sequence.
ACCESSION   KCPA01002745
VERSION     KCPA01002745.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 481)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 481)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="301952tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>481
                     /note="ultra-conserved element locus uce-3733"
BASE COUNT          157 a           98 c           80 g          146 t
ORIGIN      
        1 cccctccacc catgccccca acattcacac tacactgtct gactgttgca ccccccttta
       61 tctgcctcaa ccaatctcca aatgaatgca tgtctatcat ggccttagct ttgacactct
      121 ggatatattg attaatagtt gccctaagct ccttttagca aatcaaattt tcacttttag
      181 caaggatttc gcctctgatt tattcagcaa agtgaaatgc actaaattga ctttgacatt
      241 cagggaaaat ggctgaaaaa caaagagggg aggaaagaga tataaattgt gtggcagctg
      301 gagacttcaa gcataaaaga ggccgttttc tatagaatat cactggttaa tttggaaaca
      361 tgcatttaaa caggagtata aattattttc ttaaaattag attagaccaa tgatttggga
      421 tatagtaagg tttacttagc aaaatgcaat atatttaacc caaattcatc acttgctaat
      481 c
//
LOCUS       KCPA01002746             636 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 302062tic ultra-conserved element locus
            uce-4593, sequence.
ACCESSION   KCPA01002746
VERSION     KCPA01002746.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 636)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 636)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="302062tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>636
                     /note="ultra-conserved element locus uce-4593"
BASE COUNT          195 a          138 c          108 g          195 t
ORIGIN      
        1 taggaacagg ttttgcctcc ttccatgtgt atatttttta gtacttttgc acggtataac
       61 tgaagcctgg ctttttacca atcgaggctt aagaggaaaa ctaacacaat gtaatgtttt
      121 gtgtcttgtc aatgcagacc agtcactgaa aaggtgcaaa gcgctgcaaa aagtgcgttt
      181 tctgaaatcc aaagcctttt aagaaaggta cacaatgcaa gaatacgcag ctgcaatttc
      241 aaaaaggcta ctgctccttt aatgcccagc tggtcctgag atgtaataaa attgacatat
      301 tgattccttt gaatttacaa atgcctgttt cataaactcc atctccaaag cctaggcatc
      361 tttagagcac tgtcattttt ttctccaaat ggatcaatta tgtgcccacg taatcctgtt
      421 acctgtgaaa tccatgcata cttctcccat ttgctgcagt tcccaggcgg acaaacttgc
      481 attatgtacg cataaacaaa cagagcattt tcctgatatt agggattgtt ttcaaagtga
      541 aaagcaatct cctgggtcct ttactcccca tacatagtgt tgtgttcctc caagtaacct
      601 ataattatta cacaacacag caaatcatta aaaaaa
//
LOCUS       KCPA01002747             803 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 302175tic ultra-conserved element locus
            uce-7383, sequence.
ACCESSION   KCPA01002747
VERSION     KCPA01002747.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 803)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 803)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..803
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="302175tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>803
                     /note="ultra-conserved element locus uce-7383"
BASE COUNT          252 a          124 c          156 g          271 t
ORIGIN      
        1 tgaaagcatt tcagctataa attacatgct gaaaaatgac aacgttcccg aatttgtctg
       61 tgtatagtga ggcatgatta tcgagctggg agcaggggga gactgtggta tattcttcta
      121 atgggagttt tgtaagaaaa agtttaatac ccagctcttg tctgaacaaa cctctcgctg
      181 taaaatgttt acctttaatg acatgtacta ttatttcatg attattttaa aatacactta
      241 aagagtttta catgttaacc agctactaag aatgccttaa tagacaacta atttttgtta
      301 gaggtgtctc gacaatttga attttatatg catgcattat gttttcttaa aatggggaaa
      361 ttatgcatct gaaggaatct gtctagaata atggggttct atagaggtta ctttaatcac
      421 gttcaccagc agttatagct gttttacatc ttatttgcaa caaaagggaa ctctaattat
      481 cttccaaaag agcataaaat ggtgtgcttt gctgctgatg taatgttgat tcgtgaatgc
      541 tgctgatcgg aactgacaac taaatacatg tcacactttt aagaaatcag tggtgatgac
      601 aggataaccc tcttttgtga cctggggacc aggagatgag gtatatattt gcttgctaag
      661 tagaaacaat ttacagtttt tcactttgaa ataaaaatca aaatgctgtt ataggtgggt
      721 tatcgattat ttttaacaat acaccagttc tgttgtgact tagaagctac cttctgcaaa
      781 acagatctag tgcttgcaaa ttc
//
LOCUS       KCPA01002748             493 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 302285tic ultra-conserved element locus
            uce-3583, sequence.
ACCESSION   KCPA01002748
VERSION     KCPA01002748.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 493)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 493)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="302285tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>493
                     /note="ultra-conserved element locus uce-3583"
BASE COUNT          179 a           73 c           84 g          157 t
ORIGIN      
        1 aaaaactttt cttctaatta ctgtaagatt ttattgaatg cacattatac atatagatca
       61 taataaaaaa aggactatta agattttaca gttcaagatt ctacaggcaa tgggaacagt
      121 ggaagcctaa tgctttctga gaatcatatc tgcattagca agataaagga caatttagga
      181 agattacaaa agcaatgatt tagagtacaa cataaaaatc tgctgagaac taattcgcaa
      241 tgccagctgc tgctaagctt cttaatcttt atctagttca attaaaatct gaatgtttgg
      301 gatttcatta acaactgggg acttggaaat tacatgcact tttacactgt attcaactgc
      361 ttatgcacgt tactggaagt tgcccgaaat gtcttcaggt agacttgaga tataattaaa
      421 acttaagtac ttaaaggata atgcagaggt aaaagaggat tattttaatt tttctgtcag
      481 atccaattga caa
//
LOCUS       KCPA01002749             426 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 302391tic ultra-conserved element locus
            uce-1922, sequence.
ACCESSION   KCPA01002749
VERSION     KCPA01002749.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 426)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 426)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="302391tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>426
                     /note="ultra-conserved element locus uce-1922"
BASE COUNT          133 a           81 c           90 g          122 t
ORIGIN      
        1 ctgtaattaa cagaactgca tttagatgct attcatgacc gataattcca acaccttgcg
       61 aaaaaaaaaa aggttgcaag ctgtaaacat tataaacata ttcaaataag cttaacgcaa
      121 tctgccatgc ttatttctgc ctagatcatg gaccagcgaa atggttaatg caaatggatt
      181 tataatttgc tttggggggc cagtttcttc tccttattta ttagcccagc tgatggggca
      241 gatttgatga ggcacttctg gaataattga gtcatcacac aaagaaggct gctagcattc
      301 agagtggttt tatcagcagc aagcaggcct gattactgac aattacactc tgatccggtg
      361 atggaggaga aagagccaac gagtgggaaa tgtccgtgtt tctatccagg aataatttct
      421 acattc
//
LOCUS       KCPA01002750             674 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 302499tic ultra-conserved element locus
            uce-2613, sequence.
ACCESSION   KCPA01002750
VERSION     KCPA01002750.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 674)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 674)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="302499tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>674
                     /note="ultra-conserved element locus uce-2613"
BASE COUNT          177 a          145 c          179 g          173 t
ORIGIN      
        1 ccaaagatca ctgccaaggc cggttcaagt taattccagt tgtgctgtca aaagcaaacc
       61 cgaaaggtgc attaaggcag ctccacgagc ggcatctgcg tccccgcggc ctttgcgtgc
      121 ctgtctgtgc cccacgggcc tgttacaata ttggatgaca tgtttacaag ttctaacatc
      181 tcactttgtg caactgcgga gcttcctcgc cggccgagaa cttccagctc tgtgtgtctg
      241 gcagagatgg gggaattcga taaccttccc tctttgggtc ttagggcgag ctgaatgcgt
      301 ctggcctgcc aaggcacaat ttaatgggct tctgaaaaca ctcaaaaggc agacagaaat
      361 gtgtggatgg gcaggcagcc aggctgacct gggggatggg ctgattttaa gcagggtaag
      421 gtcgtgaagg aatgtttgag gacaaagctg gctgggggag tgcactgaaa gcctaatgtt
      481 tgactggaat ggatttacgg agcttgaacc tgactctgta acttaagagc aaaagcattc
      541 ccacctgtcc ggctttaaag gggaaatgga aaatgtaaag aatatataat taatttcaat
      601 tacttttgct tggatattat ctttatttcc tcaagcttag gatccagtgt aggaactgta
      661 tagaaaacag ctca
//
LOCUS       KCPA01002751             689 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 302609tic ultra-conserved element locus
            uce-7369, sequence.
ACCESSION   KCPA01002751
VERSION     KCPA01002751.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 689)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 689)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..689
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="302609tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>689
                     /note="ultra-conserved element locus uce-7369"
BASE COUNT          196 a          124 c          146 g          223 t
ORIGIN      
        1 tggaagataa ccaaaatgtt tctcttcact ttactgggag gaatttggag catcaccatc
       61 aggaatgttc acatgctcag ggcattttaa gctgcacctt tagtcttctt tggcacttaa
      121 gaccagtgac caaagctggg gagtctgttg aatatgctgc tatatcccct ttatttttgt
      181 gggcatcatg caaggatggt tatacatttc ccagaaccaa tgtaatataa aagatttact
      241 gttacagttt gtgtgtggcc aggcaatggc atatggaaaa catgtttcct gctatttaat
      301 ttaattactc taatcacgtg ccagccccgg gcatgtcatt ctggacctct gaggctcttt
      361 gtctgtcaaa gagatggaca atatcttggc tttgtttagt tgctctgcag gctgcagata
      421 aaaccactga aatactgact gtttgtttaa ccaaaacttt gcattttaac catttggctt
      481 tgattttttg ttttacaaga aaagatgaca ttttggcctt ggtgagctga aaaggaaata
      541 ttagggatat gaagaagaac tgtcactttc agggcttaat agatgaaaaa gaatactcta
      601 gccttctggt cagaaatgag ctttgttagc agaaacttaa gacacacatc actgttattt
      661 tagaattgcc tattagtaag ggcagctgg
//
LOCUS       KCPA01002752             603 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 302720tic ultra-conserved element locus
            uce-6586, sequence.
ACCESSION   KCPA01002752
VERSION     KCPA01002752.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 603)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 603)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="302720tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>603
                     /note="ultra-conserved element locus uce-6586"
BASE COUNT          153 a          138 c          130 g          182 t
ORIGIN      
        1 ggaacatcac tcaggaagat ccaaccaggg tccagctttc ccttgaaaaa ttcttgaata
       61 ggaatctggg tttctagcac tgctgccttc ttggtgtgtc cagtctccct agggagagac
      121 ctgcttgtgc ttgccccaca gtgagccttg tgaacagctc cacgcagcga agcagggctc
      181 tctgaatgca aatttcattt ctgagccact ggcgctgttt caagagccgg cagcctccga
      241 gccctttttg gtgttacata tgtaacagcc tcattgaact tgacatgtca aattcaggcc
      301 atttgtgcaa aatctccctt taataatacc gtttcatttc gctcaaatga gacttgaatg
      361 catgtaaaat ggaaaaggat atttaagcgc taacattagg cagatgtctt gccagaggcc
      421 gattgaatat atgagatttt gaagtgctta acacgttttc ggtgctccct cttagaatat
      481 gtcacctggc tttctttttt ctccccctct ttccctttta agtgaagggt ataaattgaa
      541 agaaaacaaa actacaagcc ttggttttat ggggtttaac tcttgccagg caagactgtt
      601 ggt
//
LOCUS       KCPA01002753             735 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 302832tic ultra-conserved element locus
            uce-7761, sequence.
ACCESSION   KCPA01002753
VERSION     KCPA01002753.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 735)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 735)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..735
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="302832tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>735
                     /note="ultra-conserved element locus uce-7761"
BASE COUNT          170 a          177 c          173 g          215 t
ORIGIN      
        1 aaagtgggcc aagtccagcc ctggtgtaag cagctggtgg tgcacccagc ccagtatact
       61 taagcaatag cgaattttta tctgtctttc acctggcaat tgtccaggtg cccgggctgg
      121 aatgtgagga tgttggagga gaattaggtt attacatttc ctccttaatt cttcatcagg
      181 gctgccgcct gtattttcta cagaaaaatc aatgcattct gattctgtaa tttcccatgg
      241 tgcctcgccg ggcgcgcagc gtgccgtggg aggtgacata tccggtcatg gcagcttgaa
      301 ctcttttttc cagtgaaaga attcattgga atttcgcaac ctttgcatgc ttttgtgaaa
      361 acactcattt gtgtttgcgc caacctgcta atggcggatg ccggggcttg cgaatcccac
      421 ctacattcgg tgctcgttat ggcatggaat gtgccgttaa taatgcatct gtgaaactca
      481 gctgcgaggg agccaagtaa ttatcccacc gtagcgttcc ctgcttcagt gtcatcacaa
      541 ctggggcttc attaaaagtc ctaacagtag agatgttgtg tggtgcagcc tgtatatata
      601 ttttttcatt taaattatca gcaatgccat ggctcagagg taatttgact ttttgaaacc
      661 gtggagcccc tgtgaatttc cttcctcctc tccctctcgc tgccgcacca gctgatcagc
      721 cccagaagaa caaaa
//
LOCUS       KCPA01002754             265 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 302937tic ultra-conserved element locus
            uce-6337, sequence.
ACCESSION   KCPA01002754
VERSION     KCPA01002754.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 265)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 265)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="302937tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>265
                     /note="ultra-conserved element locus uce-6337"
BASE COUNT           75 a           46 c           76 g           68 t
ORIGIN      
        1 ttccccctaa ttttttgcag acttttgccg cggatattta ttataaccgg ggaaacaaag
       61 cgacggtctt ttcccattct tacaggattg tctttgtcta gctgcttgtt ttgatgggtg
      121 taaaacaaat aagattagac tgagcagccg aactgaaagc gatagctggg aggaaaagcc
      181 aatgaaaggt tgccggggaa acgagcatag gggaagctga gtgggggagc aggtggcaat
      241 catgtgggaa tactgcaaac agtgt
//
LOCUS       KCPA01002755             593 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 303044tic ultra-conserved element locus
            uce-2790, sequence.
ACCESSION   KCPA01002755
VERSION     KCPA01002755.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 593)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 593)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..593
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="303044tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>593
                     /note="ultra-conserved element locus uce-2790"
BASE COUNT          160 a          116 c          141 g          176 t
ORIGIN      
        1 ggggttgtgt tttatttatc atatcacaat gttttgttgc atcatggtca gaatagaagc
       61 gaccttgctt gttcatgagt gctcaaagcc tagagataag aggcaaagta atagagtaca
      121 atagaaagag tgtagtgtaa ttatttgtgg cttgtcaagt gaagcccttt caggccccga
      181 gtgattcaaa tctgggaact ctgcacaatt ctgtacacta accatagcca gcatcagaga
      241 aatcgcaccc agcttctccg acagtactga aattgcatca gtttgtcatg cactgagcat
      301 gccagcttcg cacaatatca tttgcttgca aatgggcctg gccccaacgc cctgagacac
      361 attctttggt atctgactct tggcctgtga tttgtcatgt ctctagtgct atcggcgtaa
      421 agtaatttta ataggttctg atggtttgct tgtggaaggt aaagaatgca ctgcagattg
      481 tgtcaggtag ctttctatgg catgtagttt ggtggaggcc ctcatgatgg tgatagccaa
      541 acaaagagta tggagaaatg agaaccctat tttgaacggt atttaacact gcc
//
LOCUS       KCPA01002756             480 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 303155tic ultra-conserved element locus
            uce-5132, sequence.
ACCESSION   KCPA01002756
VERSION     KCPA01002756.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 480)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 480)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="303155tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>480
                     /note="ultra-conserved element locus uce-5132"
BASE COUNT          158 a           90 c           94 g          138 t
ORIGIN      
        1 cagaacccgg gtgggcattt acctctaaag atctgcttta atgaattatt gcttttcagc
       61 atgaggcaga agctgcaacg gatcttaaga aagctcattt aaatttcaag gacctcttag
      121 ggatagttgc taatggttat gctaattggc gtagggtctg agtgacagtt atgtcctgga
      181 atgattcgca aatcacattt tcttggagct tattagcaga ctcattaact gtacaacagt
      241 acattacttt cagaaattca gatctaagca gaaaattaaa attatttgct aaatgaccta
      301 ataaaattga ataaaatgtg ctgagaaagt aaaaactgag gtatatcagg actccagaat
      361 ttgtaccatt gatgttcacc cattcctctg ggagcagctg ggtaagcctc acttagaaac
      421 ctgtttagat atgaaaacca atgaactcaa atcagcagca gcaaatccca gctccttgca
//
LOCUS       KCPA01002757             397 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 303259tic ultra-conserved element locus
            uce-3202, sequence.
ACCESSION   KCPA01002757
VERSION     KCPA01002757.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 397)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 397)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="303259tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>397
                     /note="ultra-conserved element locus uce-3202"
BASE COUNT          134 a           57 c           83 g          123 t
ORIGIN      
        1 ttttatttta ttgtttgttg gggagagtca gagttttgaa ctgcactggc acgtagctat
       61 ttcctctctt gtgagaaaga tgggagatga catgtcagtg caattctttg tcagaaatat
      121 acatctgcat gaagagagta gagttaaaaa tttaatctgc aaagctattt agagagtgga
      181 taggccttga caggcctccc aaatgtatta aaagaacaag aacagcagag ttatggaaaa
      241 aaaaagctgt tgcaagcaaa cagaatgaaa ctaagctttc ttgacagaat cagtttgcca
      301 aatgacttta aaattgcact atgtcttgta gttttttctt aaatagattt taatttagat
      361 gtgtaaagca gcagaaactt gcttaacttc agagacc
//
LOCUS       KCPA01002758             577 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 303369tic ultra-conserved element locus
            uce-7483, sequence.
ACCESSION   KCPA01002758
VERSION     KCPA01002758.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 577)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 577)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="303369tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>577
                     /note="ultra-conserved element locus uce-7483"
BASE COUNT          145 a          121 c          123 g          188 t
ORIGIN      
        1 gacatcgggg atgtgggatg tgttgattgt ttctcctttc tgtttatact gcctcctctc
       61 ccttgcagct gtagggctgt gcctgtgaaa gcccccgaga gtgagcttta gccgctgctc
      121 ctctgtaact gcatcattac ctcactccaa acaaagtcct ttttttttgt caatagagga
      181 tgaaaacatt attggattca ggagctcata gtagtcctgt acgcagctag ggatgaagag
      241 gatagattta tgaaatggac catttcaaat ggcattatct tcccacagtg aggaacacct
      301 ttcataaatc atgggagagc acttggaaaa gaaagcattt gttattcctg ccatatattg
      361 ccatgtgttc ttgggatgag ggagaatctt ctgtttgcat tcttccctaa ttttatctta
      421 caactaccaa gcttgacgat atgaattttc agcttacctt tgtttagctg cagagataca
      481 ctgagcctca gtgttctttg gggtatgaaa ccaactattt cttacacaat tccaatattg
      541 cagggcattt tctgcctcat tatgtagcag gaggtca
//
LOCUS       KCPA01002759             568 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 303477tic ultra-conserved element locus
            uce-3028, sequence.
ACCESSION   KCPA01002759
VERSION     KCPA01002759.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 568)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 568)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="303477tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>568
                     /note="ultra-conserved element locus uce-3028"
BASE COUNT          190 a           99 c           97 g          182 t
ORIGIN      
        1 atgttatatt tgattactgg gatatcaata caatgcaagt ggaggaattt caacagtaat
       61 ttttgtttta gtacatcatt tgtgtagggc tttataaaag atttttgttt ccaaagatgt
      121 tattggggtc cacatattct ttaacagatc tcagcattcc caagccaaca tcagagatgc
      181 tctccttcat ccagcgcttc cgcaatttgc ctactgaaaa aacaaaaaca aagtgtttca
      241 atatatggca ggattctagg agccaatcaa tcttgtgacc atgaatgaat aaacactgtg
      301 tgataaatgc ttttattcaa aaatgagaaa tgttttgttt tatttgattt attgagccca
      361 ccagactatc aagctcatta agctcagcat agtcccagag gaagactgtg ttccacactg
      421 tctactttct ttagaaacta tgaaatttag atgaagctta ggctgaagac aagaaattca
      481 aaaagccaca aactaatttt aaaaagcagc cgattacttt aattaaacca gtattgcttt
      541 aagcagctgt tcctatgaag aaggttta
//
LOCUS       KCPA01002760             358 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 303578tic ultra-conserved element locus
            uce-1552, sequence.
ACCESSION   KCPA01002760
VERSION     KCPA01002760.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 358)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 358)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="303578tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>358
                     /note="ultra-conserved element locus uce-1552"
BASE COUNT          111 a           68 c           68 g          111 t
ORIGIN      
        1 atccttgatg gctgatgccc ttcagtgcca aatcagcatg atttatcata gccatctatt
       61 cagcacaaca gaggctggag gtgagctgca tgttgtacct cacacaatat gcataactag
      121 agctctgaac tttgaaggaa agcctaggag ctatttgcaa agtgctggtg cttagtgaat
      181 actaaattac atttaggaaa tagtctactg ctaccagtta tacttcattt ttattcttga
      241 cacagacacc taaatcagag aacagtaaca tttcagagat tatggtagca gtttgggtat
      301 gttccaacac tataatagga tcagaatttt aaggcctttt ttattattac caatagtc
//
LOCUS       KCPA01002761             424 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 303680tic ultra-conserved element locus
            uce-4921, sequence.
ACCESSION   KCPA01002761
VERSION     KCPA01002761.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 424)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 424)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="303680tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>424
                     /note="ultra-conserved element locus uce-4921"
BASE COUNT          155 a           85 c           63 g          121 t
ORIGIN      
        1 ttcaagtctg aaaaaagcac agagaatgtt gtaaatgtaa tactttactt ttctgtatct
       61 attttatcag tctgataaat tatctacaaa tgcataaaac ttaagcaaca tgtccaatgc
      121 actcagaata gtcccaaact caattactta aagatttact gtacagtaaa caaatgggtg
      181 aaaaactgta atttattgaa actcataact caaaaaatat aagatgctgt agtgtacaat
      241 atgttacaca aagcaccctg gggtgcacat tcaagtcaag taataactcc atcgcccccc
      301 aaaccctggt agttccatat acaatcatgc acatttactc ttcaagagga agcccccgat
      361 gtgtttaata gcaccaaaat cagcattgtt cattgaaggg gagctaaatt aacttggcca
      421 ttac
//
LOCUS       KCPA01002762             552 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 303789tic ultra-conserved element locus
            uce-4124, sequence.
ACCESSION   KCPA01002762
VERSION     KCPA01002762.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 552)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 552)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="303789tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>552
                     /note="ultra-conserved element locus uce-4124"
BASE COUNT          188 a           81 c          110 g          173 t
ORIGIN      
        1 gttttttttg agttttaagg atcagattga tgaaggagag ttcagagcca gacgtacagc
       61 ataagagaca aaggtttagt aatgagttca aaatttacaa aacacagaag caaatatggc
      121 tttaatacat gatgtgaccc tttataaggt ttgaaattac tcttcaaaaa tcattctggc
      181 ttgacttcag agccgagtgg attgtgggat accacagatt gactttgagt agtgggttgg
      241 tattgcagga attttttaat ttcctgtaac tcacaacaat tttcttccag ttagacctta
      301 tcctgctgca gagtatttac tgaacaattt agtacagtgt ataagccaga tcagaggcac
      361 atgcatgcac tcatgcactt acacacacac agaaaaatta aagtattaat agtcagattc
      421 gaaatgatca aaagagaaag gttcagtgtg gtgatgttta catgttaatg tgcatattat
      481 atgtaatatc taactagtga tggaggaaga aactttgggc tatttttaac aaaataattg
      541 ttcaaactac at
//
LOCUS       KCPA01002763             638 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 303899tic ultra-conserved element locus
            uce-1708, sequence.
ACCESSION   KCPA01002763
VERSION     KCPA01002763.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 638)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 638)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..638
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="303899tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>638
                     /note="ultra-conserved element locus uce-1708"
BASE COUNT          195 a          137 c           98 g          208 t
ORIGIN      
        1 gatgaacaac cacattactg aggagtattt ttagtggcaa caaaatcata accatcaaaa
       61 gaatgttcac tgcttgcagt tttctatttc atttcttttc ccaatcatgt ctcaacaatc
      121 tcttgaacca agcagaaaaa tgatcagaaa agctgcgtat ctctctactc atggaataat
      181 aagcttcctt tatgcaattt gttagaggtt cattctagaa cgaccttttt cttatattat
      241 ccctttaaat catcactctt tacagctgaa tacacatgaa atgctctgga gttgtactaa
      301 ggttaagcat taaagttgca tgtcaaaaat cgtattagtc aaaatcatta ttataagcca
      361 ttctacactc aaagaacctt gaaaaaatta aggttatgca gagagtttgt gagccaactc
      421 tttaatcaca cactgaactt cagatatata gtttagtaca attagcagca ctgggctaat
      481 ggttatgggt taaacgctac ttacaagcac ttttgtttgt ttaatttagt ccagactctt
      541 gctttcattc tcccccggct ccccccctcg tctttgctct ccccctgtgc accactggct
      601 atagcaacac caattggtaa aaatgagact gtgatgtt
//
LOCUS       KCPA01002764             625 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 304011tic ultra-conserved element locus
            uce-1736, sequence.
ACCESSION   KCPA01002764
VERSION     KCPA01002764.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 625)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 625)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..625
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="304011tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>625
                     /note="ultra-conserved element locus uce-1736"
BASE COUNT          185 a          121 c          165 g          154 t
ORIGIN      
        1 tggctgcagc tgaaaagctt ctgagaaaaa acgtcattgc agacgtcccc aggaaacaag
       61 caagcacaat actggcttgg tttcccctaa aggtggaagc cctcagctcc agggagacag
      121 tgttggtctc gtgggttggg aagaactctc cccagtgaag attttggtga gcagtgggta
      181 gagcatgcca taggagacta cagcgggctg atatgagaga tgatatcaga gattagttaa
      241 ccgtatgggc tgagtcccgg gggacgtgtg tgaaatgaat cagattaaac aaaattgata
      301 atgtgaatac ttaatcaaac agacaaaggt agtctgcaca gctaattagg ggcaaataga
      361 gcgtccctct tgtacctcat ttaactgaca aattgtgcag acagttttaa tgggagtctg
      421 tttagcaaag agaaggctgt acagttgaca gcttggcaaa atgtggtttc tgtaacacca
      481 catgatgctt acggaaatta gcctggtgca gctgagctca gagtaggtaa gagctgccca
      541 aactctagta aaatggtaaa agggaccttt tgtcctctgc tcctgacttc ttaaagggac
      601 ctgaatactt ttctgcaagc tggca
//
LOCUS       KCPA01002765             596 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 304120tic ultra-conserved element locus
            uce-2835, sequence.
ACCESSION   KCPA01002765
VERSION     KCPA01002765.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 596)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 596)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..596
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="304120tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>596
                     /note="ultra-conserved element locus uce-2835"
BASE COUNT          203 a          119 c          107 g          167 t
ORIGIN      
        1 taaacagaaa aatttaagag gatttcttgc aaagatggac cccctagttt caaagacgga
       61 cagactcctc cctccacagg tgaagtcagc aaattggtgg agacattaca cagactgact
      121 ttcagggagg gaaaaacgaa ttctgagcac cattacccct cacctctgaa ccaagaaaga
      181 ctttatgtgg tgtcataatt tagcaaatta cttcctcaaa ggaaggtcaa acattttacc
      241 attcgatcaa tgggaagcga cttacaaatc atgtgtattg atcattgtaa tcattcagag
      301 gaatgtaggg cagacactaa aatcacatgc acttagtctt aattgcccac attaaagcaa
      361 ttatgtccca aaactgtcat tgtctaatgc tatgcatact acccagcatg gtaactttta
      421 gccatacata tttaatcata aatcagcctc ttaggtctac tgcactgaag acttacaata
      481 ttgctgtaat tatgcaaata taactatgtc tcaatgtgta agatcatgtt gctttgggga
      541 gccaagtgga ggaaaataaa cccatatatt aatgcagctg gtatttaatg catata
//
LOCUS       KCPA01002766             490 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 304228tic ultra-conserved element locus
            uce-1295, sequence.
ACCESSION   KCPA01002766
VERSION     KCPA01002766.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 490)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 490)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="304228tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>490
                     /note="ultra-conserved element locus uce-1295"
BASE COUNT          169 a           69 c           79 g          173 t
ORIGIN      
        1 atagtcctac aaggaattcc cagtaaaaca gcgttgcaat tctacaatat attaatacca
       61 ttggaaagtg ttatccaatg ggcagatgtt aacttaaagt gcacattgtt tggaaaagga
      121 gttaattaac aacttattaa ttggatagaa agtctgaaac tgttgtactt ctagcaaata
      181 cataattttc ttcaagtatt attaaagcgt ttttgttgta cctattaaag attcttgtct
      241 ctaagttaat ttcattatgc taataagcta tcatcgttac agaacctaag ctttgatcca
      301 tgttaattgt cgtgatcttc aaagacaaag tcaccactta ctttaaatga attttacatc
      361 tttttaaaga atcacacgga aattagggga agtaattaat tttttattat gtgtctcaat
      421 atttttaagg gaggaagtca atggtattgg ctagaattca ttttaacatt taactaggga
      481 aaacagcatg
//
LOCUS       KCPA01002767             605 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 304338tic ultra-conserved element locus
            uce-7582, sequence.
ACCESSION   KCPA01002767
VERSION     KCPA01002767.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 605)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 605)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..605
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="304338tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>605
                     /note="ultra-conserved element locus uce-7582"
BASE COUNT          209 a          123 c          102 g          171 t
ORIGIN      
        1 atccttaaga attcaatagg aaaatattta tttaggcagt atatttatgg agaattttaa
       61 gaagtgataa aagcagtgaa gtctaaaact gtacagagag catctgacac cgagcacgat
      121 attatcagtg tcagcatact gatgacccag atggtatttg tatgtttgaa gtatgacatc
      181 tatactcctc tgtcatccaa cacaagtaat taacaataat caagtgggtg ttaattggat
      241 ataatggaac aatctccagt cagcctgagc ctactatttg cctcttacta gtaattatga
      301 acactaagta ctcacgctaa tctccttctt ctcactgaag ccaaacagag gtgcagtatt
      361 tactcagctg atagcttgtt ttgtctgcaa tttaatctgt tttaagccaa gaaactcata
      421 atttgcagag ccgtcaccag ctgccagcat cacacaaaag aattcaaggc cctagatgac
      481 agcaattcag tatatataat ccagggaaaa aaagaacaat cattaattaa actgacctgt
      541 tacaaccgca gtcacggaaa attacccatt tgtgtaacat ctgataagct cacaactctg
      601 accca
//
LOCUS       KCPA01002768             576 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 304442tic ultra-conserved element locus
            uce-5696, sequence.
ACCESSION   KCPA01002768
VERSION     KCPA01002768.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 576)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 576)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="304442tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>576
                     /note="ultra-conserved element locus uce-5696"
BASE COUNT          208 a           88 c          100 g          180 t
ORIGIN      
        1 ctcattaatg ccactctttc ttagaatctt ttaaatatgt atttttcatt aaaattctaa
       61 ttcttggtaa actgaaagca agatctggtg acaaagaggt tataattaat ctagcaagag
      121 cagtcaaaga aatccatgta attgaaagcg aatgtgtgaa tgaggagact aatgctacag
      181 aacttccaaa gccttttctg tggaattaat actacagaga cccataaaag attaatcaag
      241 ataagcaatc gataacttct caagtgctaa taagcactgc catgttccat gatatgttga
      301 gcagtttatc atgtttaacc atatgaagat ttatagaaaa tccattgtta aaaccaaagg
      361 atgaggtaat gcaccactta gtaaatgaag tgcaattaaa atttatgctt gatattacac
      421 attcaaaaga tctgtaaaaa tcattttggt ttcctctttt taaaggaaca aaattaaggt
      481 gctgcttgta tctttcagtc agtagtcctg ggagaacagt gaagacagca atggcattct
      541 tcaagttaat atctgctttc aaatgaaagg tgatga
//
LOCUS       KCPA01002769             529 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 304554tic ultra-conserved element locus
            uce-4330, sequence.
ACCESSION   KCPA01002769
VERSION     KCPA01002769.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 529)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 529)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="304554tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>529
                     /note="ultra-conserved element locus uce-4330"
BASE COUNT          183 a          114 c          102 g          130 t
ORIGIN      
        1 gacattcctg caggtcaaaa ttaaaataaa aggcagagac tcggcatgca cctctggtta
       61 gactgctggc ttgctcaaca cagaggctgc ctgcggttaa tcagccttct ttctccacta
      121 actgtcactg caaacaaagg aattagcaga aggtctgtag ggagcattga gataatttgg
      181 ctgtctgaag aaaagaaaag aaaagcaaaa caaaattact gaaatttact tgcactgacc
      241 tctccataaa tatttagata taatcatcat taccttggag taaattaagt tataaacagt
      301 ctccacaatt gcacatgatg aatgcgtatc ggcatcagag agcactttat tgcaagttaa
      361 tgtggaaaca gaacacctca atcaatcagg atgcagaaga gctgtctgat gatatcagcc
      421 cgtctcaacc tattcataca ggacaccgta ccacccacac acatcctatt aaccaataca
      481 tatgaacccc agaagatggt aagatgtatg tctgtggagc tggaataac
//
LOCUS       KCPA01002770             731 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 304663tic ultra-conserved element locus
            uce-5565, sequence.
ACCESSION   KCPA01002770
VERSION     KCPA01002770.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 731)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 731)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..731
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="304663tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>731
                     /note="ultra-conserved element locus uce-5565"
BASE COUNT          198 a          127 c          157 g          249 t
ORIGIN      
        1 aaatgttcct atgtcttcat agaaaagggg agagaagggg caaactgact tactaagaaa
       61 tgtttgattg atatgtaaag taatctgttc ctgaagagag ctattcctga aggaactgca
      121 cagcatacgt aaatcccgtt acttctctgt ctccagatat gtttgtcatt gtgcttgtgg
      181 tacacatagg tagattaata ggtacataca tagaatcctg cgtacttact gctttaagct
      241 attgcatgtt caaacagatg ttgaagccaa gattattttt gcatgtgcta gtagtgtgca
      301 aaccttttaa aggcatctat gaattattac tttggttcag catgagtgca gtaagaagaa
      361 atgtacctca tctgtaatac actgtgtaga ctaatatcag cttctttttt tcttatattg
      421 cagtgagata ttgatctggt aaaatggtac catattggag ctgtctgttg tggtattcat
      481 catgctgtca catccctagc gccttggagt tattgaaaag cggaattgag ggagttctgt
      541 cattgtgtgt tgcaatccat tcataagaaa gttcactaaa acatctgaag tagtgttctt
      601 gcttatttat ttatttgcat ctagtgagaa ccgtttcact tctggggtac agagccctgc
      661 tatttcaggc acagggacat tgataggctt ggttacctct cctcggacgt ctttctcttg
      721 tataccggtt g
//
LOCUS       KCPA01002771             406 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 304758tic ultra-conserved element locus
            uce-3170, sequence.
ACCESSION   KCPA01002771
VERSION     KCPA01002771.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 406)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 406)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="304758tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>406
                     /note="ultra-conserved element locus uce-3170"
BASE COUNT          138 a           63 c           70 g          135 t
ORIGIN      
        1 atatatatat acatatatat attttaatac ttgtggacaa aatgatgtta caagttgttt
       61 gaaaacaaca aaatcaccaa tgtcttccat tttgagatgt gtatagttcc atgagcatta
      121 gtgctttgta gcaaactgta gtgccatgtt aggatcagtg catgagccta gtagtatttt
      181 tacaatttcc gagtgacaaa tttattagta aacagtgatg ataatgtaat taacactaga
      241 aaggatacaa tagaaatgtc acaaacatgg tctaaacatg cagtatcctc cctttgacaa
      301 tggcaatgct atctttagaa atggaactct aatgggcttc atagaatcat agttgacttt
      361 ttgtgtccat ctgcagtagt aagcttatgc aagcatccat aattct
//
LOCUS       KCPA01002772             796 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 304868tic ultra-conserved element locus
            uce-3743, sequence.
ACCESSION   KCPA01002772
VERSION     KCPA01002772.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 796)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 796)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..796
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="304868tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>796
                     /note="ultra-conserved element locus uce-3743"
BASE COUNT          235 a          201 c          195 g          165 t
ORIGIN      
        1 agaaggctct tggagaacag aagaacctgc tttaaggaca tgacacagag ctacaacaac
       61 aagagagaga gaagtagaaa gagacatact ggagaagctg accattgcga aatgctgaca
      121 ccggtctcct gtgaattcga tcggacacct accggaagag agaaaaccag aaagagagaa
      181 acaagatagc aaaatgacac cctgaggccc ctgctgatcc cttccatggc tcctatctgt
      241 ctgctttcag ccttcaccct tacctgcagc cctaagccct acccaaagct gacaccaaga
      301 gccatccctg actagaccac tctacatcca ccgctgtgcc cgggaggttt taagtagtgt
      361 ggtgcagtct tcaaacatac tttgcttagg atctggcatg tacaatcgca aaggcagttt
      421 ctccaaacat ctctgtccga agaatccatt tggacatctg gaggggaaaa ggggagaaat
      481 cacagaacat gtctggcaca gttcttgagg ctaaggtcag aaataaaaag tgcattgtga
      541 tgaatggaaa aaataaaggc tttacatgag accaggcatc tgcaacatca gtgttccagc
      601 tctggttagg cctaggtctt caagcaggca gccaaaccac tcctgctctg tcctgctctg
      661 cctggctcct tccttctcac ctgctagaag catcagctgg caggaagact gagatgggct
      721 ggatgctacc gtggagctgc tctgtagact ggcaagaggc accaaaagca gtgagcagct
      781 gctcaggtga cagcga
//
LOCUS       KCPA01002773             336 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 304971tic ultra-conserved element locus
            uce-7240, sequence.
ACCESSION   KCPA01002773
VERSION     KCPA01002773.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 336)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 336)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="304971tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>336
                     /note="ultra-conserved element locus uce-7240"
BASE COUNT          118 a           56 c           66 g           96 t
ORIGIN      
        1 caccgatatc aaccatttta atgaaagaac acccaatatt ttcatggaac tataaaaggg
       61 agcaagacta agtgttatgg caaaaagcct gggctcagca gctttgtgtg ggaaatggtg
      121 aaatgtgact gtgatttata atgagaaaag gtatctacaa catacaattt tctacctagc
      181 tgcaaataat aattcatagt gatgtccctt ccagataaaa tacctttgca atgtaggact
      241 catgaggtaa aatgatcatg ataaatgtca gaccagtgca ggtaacggct ttacaaacca
      301 ttaagattag ctggctcttt tttttgatga taacag
//
LOCUS       KCPA01002774             477 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 305070tic ultra-conserved element locus
            uce-3600, sequence.
ACCESSION   KCPA01002774
VERSION     KCPA01002774.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 477)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 477)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="305070tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>477
                     /note="ultra-conserved element locus uce-3600"
BASE COUNT          101 a          111 c          110 g          155 t
ORIGIN      
        1 taattccttg tttgtccttt aataaaagac ccgtgagctc cccttgacac cagagctggg
       61 attgctggga cctggggcgt cctgtgtgcc agctctttgt ggcaatctgg ttccacatcc
      121 atcctgccaa cccgctcctc tgggggttgc atgtttgaaa acacaagcag cagctcatct
      181 cccattcact gtttttctcc atcatttgct ttattaaata ttgattttct gttgcattat
      241 taaaccttaa gtcctgagca taaattcaga gtggatactt taatctggct tttctttttg
      301 gcctttagaa ctgatttttc tggccaatct ctccagaggc gagtccagaa gcaaaaacct
      361 gttgcagagg cttggggagt cagaggatga agcaaagggc ttttccccag ggatttttgt
      421 ctgtttggtg tagtctttgc catgaaggtg gcatccttgg ggatcctggc ctgcaat
//
LOCUS       KCPA01002775             540 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 305174tic ultra-conserved element locus
            uce-5781, sequence.
ACCESSION   KCPA01002775
VERSION     KCPA01002775.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 540)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 540)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="305174tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>540
                     /note="ultra-conserved element locus uce-5781"
BASE COUNT          129 a          133 c          134 g          144 t
ORIGIN      
        1 tgtgtttatg gatttatcag aatcgttgtg ggtgttacgt tcacaattca tcagggaagc
       61 aggtttgtaa ataatatttc aaacatatta actaggcagc tctggcacgc actccttttt
      121 atagctctca gaaaatagct tcttaaaaca gtgacaggct gttgtgagaa agaaaggggg
      181 gaaatgtagg tcaggtctgt cacacatggg ctaccattac atgaagtgat aggctgtctt
      241 tctgctctgg cctcaggata ggagtccctc agccttccat tagaaccttc aataaatgta
      301 tatcccccct acatgttaat ggggggagtc aatagtagtg gcttgcccgt ggggaaagca
      361 ctcggtcgca ctctgcggtg acacactcag gccggcattg acggggagcc gccacgcgga
      421 atgtgctgat aaaagcccgc tgtctgcgca gcttgttatt gaattccctg ccattgtgca
      481 ctggcacacc atcagacctt gccccctctt tttaactccc ctgccgccgc cggtgccacg
//
LOCUS       KCPA01002776             844 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 305283tic ultra-conserved element locus
            uce-1210, sequence.
ACCESSION   KCPA01002776
VERSION     KCPA01002776.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 844)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 844)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..844
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="305283tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>844
                     /note="ultra-conserved element locus uce-1210"
BASE COUNT          267 a          158 c          158 g          261 t
ORIGIN      
        1 aggaattaaa taatagtgtt gttgactaca acagaattca gcatatgctg tgtcacctca
       61 cctggagcct cagcacacac aatcactaac gaattttaaa tttttgaacc cttacaattc
      121 cagatatagg tcccctcttc tcctccccct gcaaatcccc aaatctaaag ctattttaaa
      181 caattactaa atctaaggat ttcaataaaa tgtaatgttc acagaaaaat ctcataaatg
      241 tcaaaattgc tatgggcaga ataggggaga atgtagtatt ttcttgatct gctgtagcaa
      301 tttatagatt tcaggatgtg gtttataaga atgctaaatg ttctggaatt acagctgtta
      361 ctgatcagtg attgagccag atttgtgtta ttgcaccatg ttcatgcttg tacctagaga
      421 gcagtaaagc ctcaatataa taaaaagcac ctgcatttta aatgaaattt caattgaaaa
      481 acttaacagc ccttcaaatt gcagaattta acgcagccca gtaaagctta aataacactt
      541 tgcctccaca ggctgagggt tttgcattca aggtgacttg attgtgtcgc atggtgaaat
      601 tatttacaat taaggaattt ctctggaggg ctgcagagta tttgctgttc cacaacacct
      661 atgcaggcat atggtcggtc tttttcagta ttcatggaag ctcctgaacc tttatgataa
      721 ttgaatcagt tagagtgctg agtggagcaa gcataaaacc tgttaaccta aaggtcagat
      781 ctgtgcattg tttatttatc agtaggtgaa agagctaaat cggcagcttc tgtcacagtc
      841 ctag
//
LOCUS       KCPA01002777             502 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 305387tic ultra-conserved element locus
            uce-3654, sequence.
ACCESSION   KCPA01002777
VERSION     KCPA01002777.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 502)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 502)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="305387tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>502
                     /note="ultra-conserved element locus uce-3654"
BASE COUNT          135 a          112 c          109 g          146 t
ORIGIN      
        1 cccctttctg caggcagcag atgcactctg cttgctgcaa agacagagga gacagaaaga
       61 aatagcctgt agctgacatg ttcccgaaga aaactctgca gctgcaagtc caacccagac
      121 aacactagct gcctgtccca ttgagcagtt tccatggggt actcaagggg ttaatggagc
      181 ctatagtgga gtgtttgctt tcttctgttt gaaatcaaac atctgatctt tatctgaggt
      241 gacaggttta atgtcttcct tctctgacaa atttttaccc gaagaggaat gcaaacacat
      301 atattggtgt ggttttataa gtgctcatct cagcaagcca atatgggaag gttcatcccc
      361 taatacacag caaagccatg agcttgtgcc tcttgctttt atatccctta catcatttaa
      421 aagatgttac ttcaggggtc gcgtactttg acagagcttt aggcaaggtg aagtatcact
      481 gtttatcaat gctgacttcg ct
//
LOCUS       KCPA01002778             433 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 305497tic ultra-conserved element locus
            uce-5182, sequence.
ACCESSION   KCPA01002778
VERSION     KCPA01002778.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 433)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 433)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="305497tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>433
                     /note="ultra-conserved element locus uce-5182"
BASE COUNT          110 a           99 c          106 g          118 t
ORIGIN      
        1 aaagcacctg aaggctgctc ctgagtcatt ggatggcatt caacgactgg aacgatagaa
       61 gagccatgcg cttctgattt ctacacctca gaaagggtta atgctgaggt gctctattgt
      121 attaatgatg gttgtgtctc cacaggcccg ttgggctctt tcaggggcct ctcaaaacaa
      181 tgagtgcagt gaggctgttc tgtctaatta ctccaagaca gggatgctaa agaggaatta
      241 atgacagttg acaagtgcaa ttaataatta tagcaaagct gggagtcatg cagcaggcag
      301 atgacaataa cagggtaact gtacatgaca gctttcatcc gttccctgcc cctcctgctt
      361 ctcctttctt ttaccctttc atgtgagctg ctgcatgagc gggccaggcc gcgtgttcct
      421 tagattagtc caa
//
LOCUS       KCPA01002779             595 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 305604tic ultra-conserved element locus
            uce-6565, sequence.
ACCESSION   KCPA01002779
VERSION     KCPA01002779.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 595)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 595)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="305604tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>595
                     /note="ultra-conserved element locus uce-6565"
BASE COUNT          193 a          110 c          101 g          191 t
ORIGIN      
        1 aaaacaaaca tatagatcat ttttcatttc caagactcat gactgcaaat atataattat
       61 agtattcata catccaacat caaatatgat ttagtactag agtagctgta aaacacttat
      121 ctatcaaggt cgcacaagct cagataaatc aggtgttaag caggcacatc ttcaaggaat
      181 ctgataattc tctcatctgc aatcctcagc atatcttatt atttactgcc aaagaaatga
      241 ctgattaatt ttgtcatctt tgcactgtga tttttgctca gctgaaactg gctgccctct
      301 tctgcaatgc ctgatcagac ctatttaagt tgatgccttt gatcgcagac actgcggagc
      361 ttgctgactt aggctttgac taaacattcc tccattgcaa tatttatgca cagaatccta
      421 aatgataatg gacagtcaat gaaaaacttg taagatgttt ccactatttt acagatgctc
      481 aaaagaggag gtatcagtca agatgaaaaa aattttgctt tgatgcaaag tatctgaggt
      541 caggaaataa agtctgttgt tgggaaacgt gtagtctgaa tgctttaaat tcttt
//
LOCUS       KCPA01002780             542 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 305712tic ultra-conserved element locus
            uce-6135, sequence.
ACCESSION   KCPA01002780
VERSION     KCPA01002780.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 542)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 542)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="305712tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>542
                     /note="ultra-conserved element locus uce-6135"
BASE COUNT          172 a          114 c          105 g          151 t
ORIGIN      
        1 acacacagct tcttgctaaa ctgaaagaag ctttgtaatc ttccatataa tgcctgtgct
       61 ttttcacctc tcagttgggc aagctattaa tttcttgagt aaaagggata ttacagatgc
      121 ttggcagaga gacatctcag cagcaggccg agtacttgcc aaaaaaatgt caaaatgtgg
      181 atgtgcctcc aataatttaa aaaatagaag gtgataagtt gaaaatgtca ggtaattggc
      241 agacagatag aaagttaaac tgtgtcctca gtgaagaaaa ttaaccagca gctgccagca
      301 gaggccccaa ggtcatctga atgtcagaac caagtaaggg ccaatcattc agaaggggtt
      361 cgctgctgat atttgccctc cctggtcatt ttcagatctc ccaggaactg ccctgaacta
      421 ctgccaacat gtgttcattt ctaaaaatta catagattgt gatttattac ccatcacgct
      481 acaaaaatcc attgtgaatt aaatcagccc tttgtttaaa ttgctcctct gcaatacgta
      541 tc
//
LOCUS       KCPA01002781             519 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 305817tic ultra-conserved element locus
            uce-667, sequence.
ACCESSION   KCPA01002781
VERSION     KCPA01002781.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 519)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 519)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="305817tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>519
                     /note="ultra-conserved element locus uce-667"
BASE COUNT          177 a           86 c           91 g          165 t
ORIGIN      
        1 tgaaagcaaa agagcagctg agctatttta aggtctgttc ttccagcagt ttcacatctt
       61 aaagaaaaat aagaattaca ccaaactgct ctgttttcat tgcattatgc agatgaaatg
      121 acaagttgtc atttaagaag ttaataaaca gtcaccattt tgcaggttat ccaaatgcta
      181 ctgaatagaa aaccttggat ccctaaatga tgtgtaatta aaattattta aaaaatcctc
      241 cttgacaggc cagggcttag ccaaaatgta aatgacatta aagaagacaa tgaatttaat
      301 tttatttaat gtcccttttt gcagatcctc atttacatag catttttaac aaaagcgttg
      361 accttataaa tgctggcatt tgtacagctt ctgcagagtt ggatttaatc atgctttcgc
      421 aaagccataa gggaaaaagc tttaagttct ctggttggat atggagtagg aataaaaaca
      481 ttgggactgg tcaaatgttt atcctccttg cttctgaaa
//
LOCUS       KCPA01002782             464 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 305915tic ultra-conserved element locus
            uce-3650, sequence.
ACCESSION   KCPA01002782
VERSION     KCPA01002782.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 464)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 464)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="305915tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>464
                     /note="ultra-conserved element locus uce-3650"
BASE COUNT          129 a           91 c           98 g          146 t
ORIGIN      
        1 cgcggaaaga aacttgcaca aaagaggtgt ttcaagcaga ataaattata gtgtgatgtt
       61 attaaaacac ttagttgtta agttgccaag aaaatccagt atattcacac ggactcgagg
      121 acctgtctcc atgcaaagta attaaattag atttatgggc tgcattacat cagtgtttga
      181 tagttcattt ttcctttctt catattttgt cctgctttat tagagcatgt gacagatgat
      241 aaaaatagtg tgaagtttct tggccctgtg ctaaatcccc ctttggtagt atatctctct
      301 tctgtcagtt ctccccagtg atgataaatt aacctctcct cttctatccc aagtgtggca
      361 gtaaagcact ctttgacaca gcactatcac tttatcttaa tctgtgctgt tccaggggcg
      421 gggcggggaa ggaagcgagg ggagatgatg caataccacg agct
//
LOCUS       KCPA01002783             445 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 306025tic ultra-conserved element locus
            uce-3163, sequence.
ACCESSION   KCPA01002783
VERSION     KCPA01002783.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 445)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 445)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="306025tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>445
                     /note="ultra-conserved element locus uce-3163"
BASE COUNT          185 a           86 c           70 g          104 t
ORIGIN      
        1 ctcccctctc ctcccatttt aactacaatt ccagggtgtt aaaacgtcaa ctaccaagct
       61 caaccagctt ccaagagtta attagaaaca aatgttatca gagatgcatg aaactacaaa
      121 ctactgctga agagacaaaa acagtgagat gcactaaaga cttgaaatca aaaggaaaca
      181 actcaaaatg gtacacaaaa caagtacaga aaccaccatc tgtcccttca aaacgagaac
      241 tgccatgaag acaatgtata gttacctgca tccatatctg caaagaaggg aacagccagt
      301 aaggaaaaga aggaaccaaa aattcagtgt ttcagagttg gaaaaagttc ataaggagaa
      361 cagataaaaa taatcaaaga agcatttttt ttgatttcta aacttagaat tttctatgcc
      421 gtaagaacaa aatatttaat atatt
//
LOCUS       KCPA01002784             608 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 306133tic ultra-conserved element locus
            uce-4446, sequence.
ACCESSION   KCPA01002784
VERSION     KCPA01002784.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 608)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 608)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="306133tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>608
                     /note="ultra-conserved element locus uce-4446"
BASE COUNT          180 a           99 c           96 g          233 t
ORIGIN      
        1 catctaggcg gtaatcatta tattatgctg aactgcatgt tgaaattaca caatccattt
       61 aattttcaaa atttttggca ataagtgaaa tctcagcatg taattttctc aagtgatctt
      121 tcaaaaaaca tatcattttt ataagctagg ttttaattgc atggcaaagt aaggctagtt
      181 tgtgcatgag caagttgaaa tgctaaccaa aggaacatga aaaacgcaca tttctctgct
      241 ttattggatg tgacagagtc acgcttttca ttcaccattg cttctctttt tccactgtct
      301 gtgatttgct tgccaggagg agctactatt cttactccta ctatctgtaa gtagcgtacg
      361 ggtgacttac tattttatgc attttaaaga tgcagtatcc ctttttaaaa aagaaaagtt
      421 ttattgatag ttacctttcc ttgttctcag gcttgaaaat tgtatcattg ttcctgttat
      481 tctttttttt aaagggatat tgtatttcta actgtatatt gagactttag ttccatagct
      541 ataattttag tttattataa tcataattta atttgcatta tgattcagag caacacatca
      601 cactaagg
//
LOCUS       KCPA01002785             593 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 306242tic ultra-conserved element locus
            uce-7474, sequence.
ACCESSION   KCPA01002785
VERSION     KCPA01002785.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 593)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 593)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..593
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="306242tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>593
                     /note="ultra-conserved element locus uce-7474"
BASE COUNT          161 a          148 c          110 g          174 t
ORIGIN      
        1 ctcaggccac caccctcatt ccttcccaaa actacggttt gacatttttg caatgattca
       61 actccattct taggcttgtg cttttcatcc agaaccacag aacagatcat caccttttgt
      121 cctgcgccct tcctttttaa gagtggcctt gcagttaaaa tgtgattgaa accccacatg
      181 tacactgatg tgaactcact tgcttgccaa ctcccccccc ggcgggaggt ttgggatgct
      241 ctcagttgct aacgtacgca tcacgtggac taagtctggc actccttcac cctgcttctt
      301 tatgatctct gggaatcaga agtacttttt ttgtaagtgc agtccaaatt gaaacactca
      361 aaaaggcagc ttaacaaagc gacagaccgt actcaacatg gtaattgtta actttggttc
      421 cgtaaggaaa aacctgtaac agacttgatg cagatttact gctgacatgc tgacttggtt
      481 ttagaaatac acagctacct agtaacatct ttaatggctg tcctgctaat agaagatgta
      541 atatcttccc acaatatgcc caaggcatgg ggtagatatt aacatcagct tta
//
LOCUS       KCPA01002786             669 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 306352tic ultra-conserved element locus
            uce-3392, sequence.
ACCESSION   KCPA01002786
VERSION     KCPA01002786.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 669)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 669)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..669
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="306352tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>669
                     /note="ultra-conserved element locus uce-3392"
BASE COUNT          233 a          140 c          108 g          188 t
ORIGIN      
        1 ccttcaaata ataatcaacc tttacaaatg caattgatag caaattcgaa ggcagccact
       61 gaaagcagta taaatttcag gagtatatta gtaatcgtca tctgcaaaaa aataagctcg
      121 taacattaaa aattcagttc aacacgtctc tttccttgga ccctggatcc taaaatgaca
      181 tactacaaga taaaatagta atgctaatat tgatagtttg tccattacag gtcagctaac
      241 tgtccactgg aacagttaca aagctgttag tttcgatttc acaaggccaa tcaataccga
      301 ggcatactgt ttcaattttg tctgcattga ttataacacc ccaaccttac agcattcatc
      361 tttctgaaag aaggaagatt tgatttactg aagaaaaatt ggagagagca tcacaaagat
      421 tttaccggca agcctgtgac acagggaaaa agatgaatgt ctctaaggta gagacgcctc
      481 ttgctcgagg gcatccatta gaacacgttc aaccaatctg aaacagagtt tcttaagcaa
      541 ccgaaaccca agcctaaact cagtctccca aactaatcaa aagcattcag ggaggttctc
      601 ttaaaaattc ctaaacctta ttgcttctaa aataatttat gtctgcagtt ctacctatgc
      661 atttttctg
//
LOCUS       KCPA01002787             392 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 306455tic ultra-conserved element locus
            uce-2954, sequence.
ACCESSION   KCPA01002787
VERSION     KCPA01002787.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 392)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 392)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="306455tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>392
                     /note="ultra-conserved element locus uce-2954"
BASE COUNT          143 a           71 c           53 g          125 t
ORIGIN      
        1 caaattagct ctcaacatag cctttacatt atgcttttaa cacttaaaaa ttctagttaa
       61 aataactttc cattttacag aataaacaaa gaccataact gttttcacac tgcttctaaa
      121 atgctgttct ggtgccccag ggacttcttt catctagtgt aaatgctggc atatgatgtg
      181 attgttaaca tagctggcca ccagatgaag taaattatct aaactgccaa gattcctact
      241 ttcattccaa tttaaatatc aatttaacac agaaactgaa ggatattatg aaagctttag
      301 tatgaatcat tttggatatg aaaaaaaata gatggatttc tcaagctacc aaaacaaaca
      361 aatatctaat tcattgaacc tgaagatgag ct
//
LOCUS       KCPA01002788             703 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 306565tic ultra-conserved element locus
            uce-607, sequence.
ACCESSION   KCPA01002788
VERSION     KCPA01002788.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 703)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 703)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..703
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="306565tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>703
                     /note="ultra-conserved element locus uce-607"
BASE COUNT          204 a          127 c          150 g          222 t
ORIGIN      
        1 tttcagaaat aaaagcctgg agccagatgt ttgcaagctc cgtacttgtt tgtaatatgg
       61 aaacatgtaa aaacttcggc tccttgcatg tggaatctag atcaattttt aatttactcg
      121 tacgcatgga tgactcattt gaaaaagaaa attgtggcat caaaaaaaag acatttcagg
      181 ctgcataggt tgctgcattt atctgtttct cgtgcactct gaagtggaaa taagtcacag
      241 tatcttaata atggtcttga ttttataaat gatttttccc cttgaaataa gcaatccatt
      301 cattttaata tgtagaattg gtttgctagc agggcgacag tttaaaaaga cttccaactg
      361 tgacacaagt gcaaccatat tgcttcctat tactcgctaa ggtagttgtt tagaagagag
      421 aatgttctcc ctggaaatgt ttaaagtgct gtaattttat ttaggataat gaggatttat
      481 aacagtttta ccatatgaaa acctgccttt agacagagtg aaatagttgg ttgcggttac
      541 ggagcgtgag acgtggggag gtgtctgcgc ctgcctgggc agcgaatccg tcacccggcc
      601 cagaacgttc cccgcagccg cgtgggataa ttcatcacca gcatgtatgg atttctctgc
      661 tttaatcgct ctagacgtta attaaaatcc tgttttatag aat
//
LOCUS       KCPA01002789             525 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 306671tic ultra-conserved element locus
            uce-3042, sequence.
ACCESSION   KCPA01002789
VERSION     KCPA01002789.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 525)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 525)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="306671tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>525
                     /note="ultra-conserved element locus uce-3042"
BASE COUNT          205 a           78 c          102 g          140 t
ORIGIN      
        1 ttagcctagg aaaaatagtg aacaaaaata catattttgt atcctcatgc taccaattag
       61 agacattatt taatgcaggt attttagctg ccagtctgta tataaaacag aacaaaacca
      121 tttttgatag ttatttaagg gcatcctaaa tacactcaag aatagtacat tttaattttc
      181 aataatgcca gcagactcaa gcattcagat tttagcataa ccagcaggaa aactgtttga
      241 tgttttaatt atgtcccaga aaatgctgaa tgtgttataa aagaaatctg aagaggggag
      301 ggggaaggtt tttattactg ctcaagagga aggacgtttt acaacatagc attaaaaatg
      361 taaaatggaa taaaaaagaa ctcggatagt caaaactttg tctgcaacaa agtaggccag
      421 agaagcacaa taatatgcct gttagaagca gtcagcagtg agaagtgaag tagaacattt
      481 acatagacac agggctgaag gaaaggaaaa gcctttaact ccaaa
//
LOCUS       KCPA01002790             787 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 306780tic ultra-conserved element locus
            uce-2378, sequence.
ACCESSION   KCPA01002790
VERSION     KCPA01002790.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 787)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 787)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..787
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="306780tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>787
                     /note="ultra-conserved element locus uce-2378"
BASE COUNT          227 a          196 c          159 g          205 t
ORIGIN      
        1 aagcacgagg gcgcagtaaa tcccgagtcc tgctattact actgtgctct gtgcgattac
       61 tccaccaagg tcaagctgaa cctggtacaa catgtccgct ccgtgaagca ccagcagaca
      121 gagggcctcc gcaagctcca gctgcaccag caagggctgg caccagagga ggacaacctc
      181 agcgagatat tctttgtcaa agactgccca ccaaacgagc ttggtgagta gcactccctg
      241 agccctcccc caaagactct ccaaacccag gacccgtccc ccagtgtaaa acacggcagc
      301 tcttaatctc tcagaaatga acatgttgtt cccattaaag ccttcttttt atatcagtac
      361 catacgcagt cctgcatgcg gtgacatctt tagcaggcat gcaggaggtt atgaaactct
      421 acctagggag gatctcacag tgaaattttt ccccccagag tgagctttaa tttcctttct
      481 catgaccaaa gcaatttggc tttcatttaa aagtttcttt gctgccagca gctaataagt
      541 gtaacaggac tgtaaaacat tctgagacaa aaaaagatta atagttttat ttgagagaga
      601 ccagtaattt aaaacataag acctagtcag ggtccattat acaataattc caatgttaat
      661 gctactttgc aaaatgagcg cttaacttgt ttttgctttg gttgacctgg cgcagggaaa
      721 cagctaacac gttttgaatg gcattccaaa actgaattaa tctctgttcc ctaaagtgtc
      781 ctgttta
//
LOCUS       KCPA01002791             300 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 306883tic ultra-conserved element locus
            uce-7278, sequence.
ACCESSION   KCPA01002791
VERSION     KCPA01002791.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 300)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 300)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="306883tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>300
                     /note="ultra-conserved element locus uce-7278"
BASE COUNT          118 a           72 c           54 g           56 t
ORIGIN      
        1 ggcagactta ctggttatca ttgctccagt tacagaaccc agaaatccaa tgctgaccac
       61 aatgacagag atcagcctcc cctgcctatg cctctgcagc atcacaaaca ttaatactcc
      121 cacagcacca tggacaaaga gagaggagaa gagagcccag aggaaaaccc agtaccacat
      181 ctctgaaaga aagcagtcaa acaaagggtt aaagacaaga actttataag caagaaactt
      241 taaaacatcg caaacaatta agagaaaagc attttcatct taaaagtgat gctcaagact
//
LOCUS       KCPA01002792             608 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 306994tic ultra-conserved element locus
            uce-4651, sequence.
ACCESSION   KCPA01002792
VERSION     KCPA01002792.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 608)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 608)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="306994tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>608
                     /note="ultra-conserved element locus uce-4651"
BASE COUNT          155 a          122 c          160 g          171 t
ORIGIN      
        1 tgaaccttgg cctggggaag gtcgtgcctt ggttggactg gtgatggaca cagcagcaaa
       61 acttattggg ggagtggcag cagctgttgg gaacgcctag gagggagcgc cacaagtgtg
      121 atgagaacgt aaataaccag gggaaaaggg aaaggaaatg tgaagtggcc ctttaaatat
      181 gagcctccag agcccagagc ccaactagct ttccctcaag tattcaaatg agattgcagc
      241 atcagattgg tatgcattag gctggtctca atgaaaatta acatgtaatt gcttcaaatg
      301 aagtaagtga ggaggtaatc tgttcttaaa ttggattcgc aggattttgt ggtaccataa
      361 tgcagctgtg aaatgaaata tattttaagg atgatgtcct caaggggaga gggaaggact
      421 gggaagggtc ctttccctca ctccttttgt ttctggtctc attagtgcta ttttatgaat
      481 gaggaaaggg ctttggtgcc actggagaag gtcccattgg tttggctcca tcatatttcc
      541 ttccgtgaca tccctcttgt ccctcccttc cacttcctct ggttctccac ttctatatca
      601 gtgcctct
//
LOCUS       KCPA01002793             467 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 307100tic ultra-conserved element locus
            uce-7109, sequence.
ACCESSION   KCPA01002793
VERSION     KCPA01002793.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 467)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 467)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="307100tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>467
                     /note="ultra-conserved element locus uce-7109"
BASE COUNT          144 a           90 c          101 g          132 t
ORIGIN      
        1 aaaaagtact tcatgaaact attgtatatg aagcacttat tagccgtaat taaatggaca
       61 atatgaattt actacgtctt taggactctg gcttgttctg gtttagagca agatgattaa
      121 tgcaaataca tattacttga gataaccatt tagcagctaa tttagccaaa tttattacag
      181 cagttagagg tttttcattt tagcagacgg agacaaggac atgacaaaag caggcggtga
      241 gtgtgaaggc acactgccct ctagcgcacg aagcttcgtg ggaacagtga gaaatgcagg
      301 gagggaaagg gctccagcag caaccgtgcc cagattttta cgggttttag aaaaccgttc
      361 tgctcccttc cactgaagga tttacctttc attcccttct cctcacacgg aagaatcaga
      421 tacaaaagaa atccttttcg ttggcaatgt tttggctgaa gtattac
//
LOCUS       KCPA01002794             702 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 307211tic ultra-conserved element locus
            uce-7542, sequence.
ACCESSION   KCPA01002794
VERSION     KCPA01002794.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 702)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 702)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="307211tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>702
                     /note="ultra-conserved element locus uce-7542"
BASE COUNT          214 a          110 c          132 g          246 t
ORIGIN      
        1 tcctttcaca aatcttcctt tgaagaattc aaactcttct attgctaatg gaaatgacaa
       61 aacagatatg ggacttgctt atacttccaa tctccactgt agcgcatgtt tcaattaaaa
      121 gtaaaattac cacattcttt agtttgtgta attttttgat agaatggtac atttatatgt
      181 taattttgct aagatcaact ttatttatct acaggaagct attccaagat tgttgtacgt
      241 tttcttcact tctgaaatgt tatcacattt aattgcctga tcttatttgg gttgcaatca
      301 tagtcattaa ttagcaggaa ggtgagggac agcatcatat ctaactatct gttatggctg
      361 ctttaatgag gaaaatacct gccatcattt taaaggcatc ctgtatgctt cacaaataca
      421 gcttgctgta gcattctcat ttagactgtg aacatcaaag gaaattgatg tcaggtgtga
      481 acagaagctg ttgaatatat ctgttgagga agctgagtgg tgtgtctgga tgggagagat
      541 gaagggcagc ttaaaacatt aacaaaacta caggtaatta gtgtaaactt tcaagggtaa
      601 ggtatgcttg aggaataaaa atgttgttta tagctattcc ctgtagtgcc actatcgcta
      661 agggtctgtc aatgttttca tttataaagc tctattttta ta
//
LOCUS       KCPA01002795             364 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 307319tic ultra-conserved element locus
            uce-2404, sequence.
ACCESSION   KCPA01002795
VERSION     KCPA01002795.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 364)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 364)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="307319tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>364
                     /note="ultra-conserved element locus uce-2404"
BASE COUNT           80 a           88 c          102 g           94 t
ORIGIN      
        1 tcccactaaa accagttccg ggcgctggga gcataatggg aagcggcacg ggcgcactcg
       61 cggggagggc tgtgggaccc ttcaattgcc ggttttatta atgtccagaa gcgtaaatca
      121 cagccccata ttttgtcatt ccagtcattt tagtcactaa aggattactt caagtgactg
      181 aactcggctg ttatctgttt gagtttttgc agccaggtca tctcagggga ctgggaacaa
      241 gcttgctgcc cccttaactg tgtcgagtgg ctggctcgag cccgaccact ttttgtgatt
      301 gatgcacgtt ccgcggcgct ggggctgctc ctggcagcaa ggtggggaaa atcagtaaat
      361 aaat
//
LOCUS       KCPA01002796             712 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 307432tic ultra-conserved element locus
            uce-1053, sequence.
ACCESSION   KCPA01002796
VERSION     KCPA01002796.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 712)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 712)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..712
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="307432tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>712
                     /note="ultra-conserved element locus uce-1053"
BASE COUNT          235 a          131 c          112 g          234 t
ORIGIN      
        1 aatactgtat aatcaaaaga ttttcttgtt tcagaaatac ctttgctaaa acggcttaac
       61 acaactcaaa gtgctttaga tgaaagcaaa tttaagtaaa atttctcttt gcttctttcc
      121 aggaggttgt ctggtgccta tattcctctt ctttcacatt agagctgtaa gtctcctctt
      181 tcaggtcacg tcttccacat aaaagtgcta aactaatgcc gcttaatgac aaattaatgt
      241 ccatgaataa aaaatacacc tctaatagca tagagtaatt tgccattaca atatcatcat
      301 tggacatgcc cctggtttaa tacgatgtat ttaattcata acttaatgag tgatatataa
      361 aaagagagag atgaaccctg caattacatt tatgtgagtc tgtcacctta tttgtaaaac
      421 cttagagtca tttacattca aattagaaca aatgagtgat ttcacaaagt gcagtgataa
      481 atgaccattg ctgcacaaga cagaactgta tttcctgtga aaacattaac agtttcctat
      541 tatttgttaa aaattacaat gcatattgcc cagtgttgtg tgaataatga cttttttact
      601 gattaggtca gaagactaat acggagtaaa aataaataat ttttcttttc aaatttctct
      661 gctcaaactg ttacggactc acactgccac ctgctgccca ggctcgggga gg
//
LOCUS       KCPA01002797             821 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 307543tic ultra-conserved element locus
            uce-422, sequence.
ACCESSION   KCPA01002797
VERSION     KCPA01002797.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 821)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 821)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..821
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="307543tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>821
                     /note="ultra-conserved element locus uce-422"
BASE COUNT          248 a          198 c          157 g          218 t
ORIGIN      
        1 aagctctggc atgcaccgcc gaacaaaagg gaacaagtgg tctttactcg gagagcagct
       61 tcctattaag actcactccg tcgtacatta tgcctttcat ccccactcaa ccacaaaatg
      121 attttgctgt aggaaataca atggcagaaa aagatttaca ttgaaagaat ctttaataat
      181 aaactgttgc agatctgcct acttccccat gatttataat acaataaaca tcggattcta
      241 ttaagtctca tgcactgaag acacgcactg aaaacccgag tatgaaagcc ctcaattctt
      301 cccttctcca ggcccataat agtgaaacga gcatggataa atgtgctaag agtatctctt
      361 tgcatctttt atagcttgtg tgtatcaatc tgtaaagctt attaagaaag tcattgctat
      421 gcaaagcagc acccaatctc tttctcttgc ttttcaacag cgtgcagtgt ttagccaata
      481 gggccgggcc ccggcacctc attccgcatt cataacatgc aacatttgca caatgtgtat
      541 ctcaaaggct gctgaataga aagccttaat actcatgtaa acaactgcaa accaattact
      601 taatgaatca ggcccacaca taatgaggtg ccagacaaag agctataaat gcatttttgc
      661 gcccaagcct ccgctttaaa gtaaaatccc tcagctgtag tttgggctta actggcacat
      721 gataattatt gtctggggga catcagagga gccacagttt ttattccggt ccggcggggt
      781 ccgcgccgag gtcactcatc agctcagtga caaaacgcgg c
//
LOCUS       KCPA01002798             680 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 307650tic ultra-conserved element locus
            uce-212, sequence.
ACCESSION   KCPA01002798
VERSION     KCPA01002798.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 680)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 680)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..680
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="307650tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>680
                     /note="ultra-conserved element locus uce-212"
BASE COUNT          250 a          117 c          112 g          201 t
ORIGIN      
        1 aacatgcaaa ccctcaaact ttcaagtatt cataaggtat aaaaaatggt tttaaaacaa
       61 atgatttgac agctgcaaat gcaggataac acctagttac attatagaaa cagtgtggat
      121 aattactttt ttcagaagga aagactccat ggaccacagt cctgtctgaa tttccctgca
      181 gtttggataa tgtgcagtaa tacaaatctt gttgtcacct caaccttttt atcatctata
      241 catcagcaag aatgatgaga gacgtcccat gattctaaca gtcttccttt gaaggatcca
      301 catgttaatt actgcactaa ttatggtttt tgaataacca aatgaagtaa gcagtcgatg
      361 ggaggtacag gcataaaact aagaccgaga aaatactagt tactgaagtc atcagtgtaa
      421 actgacacat tgaacatgct taaaaaaagt agaagtagat tttaaaagac aagcatcttc
      481 aataattagg gttccacaca ggaaaaagaa atgttatttc ttaatggcaa gtgcatttaa
      541 actgttatct aaagatctga aggtaagcct gcttaattca ctgcttcttc ttttgttatt
      601 aggaaaacat aattgttcca aataattagc actagagtac atcacaagct gacaacaaaa
      661 ttatagaaat cttcatattc
//
LOCUS       KCPA01002799             715 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 307764tic ultra-conserved element locus
            uce-3900, sequence.
ACCESSION   KCPA01002799
VERSION     KCPA01002799.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 715)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 715)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..715
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="307764tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>715
                     /note="ultra-conserved element locus uce-3900"
BASE COUNT          177 a          150 c          122 g          266 t
ORIGIN      
        1 gtactgttgc atgtgtgtat tattgtaaat tctagggatt tattttcttt ggctgctctt
       61 cattttttag caaggcaata taaatctctt ttgaaatggg ttgcagtaat tattgctgtg
      121 catggagtga gtttttatgt ttagccactt gtatgtggct aaatgagata tttctctatt
      181 atcatcattt aaacatttga ctctgctttt ctggagaatg acaggtaaca ggttgtagtt
      241 ttgactgttt tgcccactac aggtgaccaa ctgagtgcca tactgaattc cattcagtca
      301 cggccaaatc tcccagctcc ttccatcttt gatcaagctg caaaacctcc ctcttccctt
      361 gtccacagtc catttgtgtt cggacagccc ctttccttcc agcagcctca gccacagctt
      421 cagagtaagc agccttacct gcttcatcag tccgtttctg cagctttgac attgctgttc
      481 tcagtttctt accagctact aatcatccca tagtgcacct ttctgaagtt tttcatgatc
      541 cagaagcatg tgagatattg ctcccaaaga agtatacttg ttcaactaat ttttatattg
      601 acaatatttt gggtttgtat gtgttcttca ctgtagtgaa tttccaatat tttatgcaac
      661 tctggtatca ttaaggtaaa tatttcatat atgataattc ttttaacatc aaaaa
//
LOCUS       KCPA01002800             449 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 307870tic ultra-conserved element locus
            uce-2690, sequence.
ACCESSION   KCPA01002800
VERSION     KCPA01002800.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 449)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 449)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="307870tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>449
                     /note="ultra-conserved element locus uce-2690"
BASE COUNT          150 a           82 c           96 g          121 t
ORIGIN      
        1 aatatgagga gtgattccca aaccgaagac tggcaaatag ttacccagct gctacagaaa
       61 tagcaagata gattttaaag aaaagaaatt aaatgaaatg gatattagct ggaaacatct
      121 gtgttcacca cagagcaaaa tgcatattca gcagccagtt tattggctct ttagaggatg
      181 tgaatggtgc attgtaaata atgacacgcc tgtaataaat tcccagtaaa aaagagaggg
      241 ggactgagcc tgttcctccc acaattcaca tttctgggtc cctgctgtga gtgatgattc
      301 acagcagtca caaattcctg ttttcaaaat gctattgtat actccagggc tttcattaag
      361 ttttacacta gcaagggaaa tttaaaactt gagagagaga gagagaggct ctgtggtgac
      421 attcatttaa cactcactgt actgcactg
//
LOCUS       KCPA01002801             454 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 307971tic ultra-conserved element locus
            uce-3273, sequence.
ACCESSION   KCPA01002801
VERSION     KCPA01002801.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 454)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 454)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="307971tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>454
                     /note="ultra-conserved element locus uce-3273"
BASE COUNT          125 a           79 c           81 g          169 t
ORIGIN      
        1 ctcccaaatg gcaaagattt tcagtgagta atggttatga tctttgttgg tttcctgttt
       61 gtttttatct ttgcaaaaag atattaaaga atctgttttg taggtcagga atataacttt
      121 ttgaagatgg agcccggaga ggtgaactcc cttggggaac catatgactt cgacagcatt
      181 atgcactatg ccaggaacac cttctcaagg ttggagtctc aggttatacc ttttgacttt
      241 taattctatt cctgtctgtg aatgctaaga actatgcttt gaagtatttt gaaatccttt
      301 aaaacgtccc ttgtcctaca gcagtcaaag cacagcttgt tcattttaag tcaaaataat
      361 ttaattatat ttgaaaatgc atttcttttc tgttcagttt caaagctgcc ttttaatctt
      421 gcttcagttc ttttgatttt cagacaagat aaac
//
LOCUS       KCPA01002802             593 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 308081tic ultra-conserved element locus
            uce-2407, sequence.
ACCESSION   KCPA01002802
VERSION     KCPA01002802.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 593)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 593)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..593
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="308081tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>593
                     /note="ultra-conserved element locus uce-2407"
BASE COUNT          154 a          125 c          150 g          164 t
ORIGIN      
        1 accagttaca acttctaggc tggaacttta tattaatcac gggaattaag gaagctgaat
       61 tccacaaaca tgttttcctg agagccattt aagctgaaag agtgcatatg tttgtcaggt
      121 tcctcatcct gcagaggtgc actgtggttt gcaggctttt ggtaagtgaa tcctgttatc
      181 tttgacaact gtaagatgca ggaggtctct ttctagatga ctccttgagc atgcccagtg
      241 tggtaagtga acaagaaaca taccttatgg gtgccattgg gaggaggcgg ttctccagcc
      301 atctctccag catgtctgca cctcaggctg aggtgggcat gttacccagc caaaggtaaa
      361 aacatgggct tttcaccttt gccattaaca agagcagaaa tgtccctcag agaggtggga
      421 tagtggaatt ggtgccagcg tagtgatgct gaatttattc atcctggcaa gggtgcaggg
      481 ctggagagct gtggtgtgta ctgtcatcca cagaaacagt ttcagaaaca ctctgtgtta
      541 tctcctacca ctgaatagca aggggtattc attgaacccc atacccagtt tgt
//
LOCUS       KCPA01002803             340 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 308179tic ultra-conserved element locus
            uce-1402, sequence.
ACCESSION   KCPA01002803
VERSION     KCPA01002803.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 340)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 340)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="308179tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>340
                     /note="ultra-conserved element locus uce-1402"
BASE COUNT           73 a           61 c          103 g          103 t
ORIGIN      
        1 ttgttgtgca gttgactgaa gaaatgttaa catcccgctc taaatctctc agtggagtct
       61 ctgttccctt ctctgatata acagatgggt tattgcttgt tataattatt aacattgtgg
      121 tgtgggacag ggctagggtg ggagccattc tggggggcga gggcgggtgc tgcttaaggt
      181 tggaatgtta actccagtgg tgactgactg tttccgtaat agcaggttgt tgtggctgca
      241 cgctctagta cttgaggctg tgtacttcac tgagcttgtg gtagagccta gggcgaactg
      301 ctgtcccaag agaatgctgg gatggataga actagccaat
//
LOCUS       KCPA01002804             893 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 308289tic ultra-conserved element locus
            uce-881, sequence.
ACCESSION   KCPA01002804
VERSION     KCPA01002804.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 893)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 893)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..893
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="308289tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>893
                     /note="ultra-conserved element locus uce-881"
BASE COUNT          273 a          175 c          173 g          272 t
ORIGIN      
        1 gaatctgagt ttctgttgag caagcagatt ttaaatggcc ctgcccaagc tgctgactag
       61 atacaaatac attcagcatg agaaaaggtg gagttttttc cttttgcccc atgctggttt
      121 tgaaatattt ggagttgcct acacttacag atctcatcat accagaatta taaaatgcaa
      181 aattatttgt ctatcttcta tgtcaaaata caacatatta aaaacaagtc acagacaatt
      241 cttttcctgt aaaggttagg gattctcaat gtacattcag agccatacac acaagtgcaa
      301 ataagtcaac taccacagct atttaatcag gagcgtttgt tgatttgagc agagccccta
      361 tgctgtgaaa tgaaaaaaga aaaccaaatt ttcttgagca atcttgctgt tcctgcttca
      421 ggtgctaggc catttcacta aagcagctca gacgagaatg tcattagttc ctaagcccca
      481 ggtgaatttg ccactgttcc acatgattaa gccagataat tgtgtgttga tagcgaatgt
      541 ggttggtgaa atacaatttc taggaccttc ctaaacaaac acaatgtaga agtgagtcaa
      601 agtgctgtca tttcagtcct ttgtcacagg ttttgcactt gcagacatct ctggtgagga
      661 ctggtgaata attctgtggc atgtcactgt gctcttaaag gtgacctggc tcagaaagtg
      721 gatcatacat cttttggcaa aagcctggct aatgtgtcca tgaggagcac agacttctaa
      781 cataagccca ttttaaacta tgcatgctgg agtttgcttt gtcttcaaat tactttacaa
      841 ttccacacag tatattcaga agtgattaaa atgccacagt aatgtgcaat tat
//
LOCUS       KCPA01002805             754 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 308399tic ultra-conserved element locus
            uce-2422, sequence.
ACCESSION   KCPA01002805
VERSION     KCPA01002805.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 754)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 754)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..754
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="308399tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>754
                     /note="ultra-conserved element locus uce-2422"
BASE COUNT          223 a          184 c          173 g          174 t
ORIGIN      
        1 ggatcccagt ataactcagg gagccatttg gctttgcaga ctgagaaggg aatcaaatag
       61 ttcaactctt agtaaacatg caaacacaac tggttgtctt tgatgatttg ttagcttgga
      121 cgagagccag gagacctggg attgcggtcc aagttcctag agctccacag ctgacatgca
      181 gagcagcaga tcccagttgg gatgagtgaa gcctgttatc agctggagag gcagccagca
      241 ggtggaatct tcctgtatct cctgctcatt tccaatctgg caaacttggc tgaacctgag
      301 tcacctactt aataaaaatt ccatattcag tccatagaaa tgcttctagc acagttagat
      361 caatttcctc taagcagcaa taaatgtgtt ttcctttaaa aggccaacac gagcacatta
      421 tcacagccta taatccccat tctccctatt agctcaaagt acatcctaaa ggccaagggt
      481 cgcagctaaa gactaatcag tctcattagc ctgtctaatt tatcttaact agggggacac
      541 aaacacacta aaactgttag ggagactttt tgatcaggat atgggagtca ttcatcaggg
      601 tcccgcagga gagaaacgac ccggggacaa agccattctc taaggaagct ctgcacccca
      661 cccaagcagg caggatgggg cagaaaccct cccgggggct cctgctgtcc caccaggcaa
      721 catcacagca ggacaggaga gatatggaaa ggca
//
LOCUS       KCPA01002806             488 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 308500tic ultra-conserved element locus
            uce-2668, sequence.
ACCESSION   KCPA01002806
VERSION     KCPA01002806.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 488)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 488)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..488
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="308500tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>488
                     /note="ultra-conserved element locus uce-2668"
BASE COUNT          116 a          129 c          100 g          143 t
ORIGIN      
        1 ccagtgccct tctccctctg tcccgcctac cctggggtaa gcgggcttcc ccctccttcc
       61 tggctccttc tcctccttcc cctccctgcg ctccgcacaa gcctcggctc tgtttgggtc
      121 cacattagca tttctgctga ctgcaaggat cggtttaatt tcatgggtgt catttccttc
      181 aagaaatctc tctctgagca gcagcccgac gaatgcctga taaaacatat tttcctacgg
      241 taatgatttt atggacccat aagtcatgaa tttattatga tctcagcccc tgctgctgat
      301 tgctgtaaaa tgcaaagtaa ttaacagcga gcggtagcag ctattcccac ctggtagcgt
      361 gttcttgggt acactgatgg ctttgattaa agtaatggct atagtgtaca gcccggctct
      421 aaaatattag catgattaat gcagtatcct aaataagaaa caaaactaat gggcatggct
      481 taaggaat
//
LOCUS       KCPA01002807             417 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 308605tic ultra-conserved element locus
            uce-4131, sequence.
ACCESSION   KCPA01002807
VERSION     KCPA01002807.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 417)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 417)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="308605tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>417
                     /note="ultra-conserved element locus uce-4131"
BASE COUNT          114 a           80 c           84 g          139 t
ORIGIN      
        1 taccatgcag caagccaaac accacacaca ggtaacatga agagtattat ataggaatgg
       61 gtttattatt ttctgtgaaa catcctctgt ttttataggt tggtttattt agactctgct
      121 gtgaaatacc ttaaaaggta acacagtatt ttgactacag cagtaattta ttacaccagt
      181 taatcttgta aaattgccct ctggatgtaa taatttgtta ttcttttatt aggccttctt
      241 ctgcatacca tgtttatcat aaagatgtca ctggtgtgat gcctagcaac cagtacaatg
      301 ttccggaggt gtttgcatac attttcctga gggagagacc tgcctcgtcc ctgcttggga
      361 gagctgtcac tatattctga tgtatgaggg ataaaaggag tccctgctgc agtctcc
//
LOCUS       KCPA01002808             529 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 308715tic ultra-conserved element locus
            uce-5227, sequence.
ACCESSION   KCPA01002808
VERSION     KCPA01002808.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 529)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 529)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="308715tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>529
                     /note="ultra-conserved element locus uce-5227"
BASE COUNT          184 a           83 c           90 g          172 t
ORIGIN      
        1 tgaagctggt caggactgat tcttaaagct agttgatgta gagtaggata gtaaagaggt
       61 ttaaaatatt ttaataaatg cctttatgtt acaggatttt gtattcctga gacgtaaata
      121 aaactctgta aagctcagag aataactaca taagccattt tacaaggagg atatactttt
      181 ccttcttttc tatgaatgca taaagctctc cttcaagctc ttactaaatc tattgatctg
      241 tgaaacacag tgcactccag ggaggcaatt cacttgacgt tatatatcaa atgatgagat
      301 gaataatgat cataccattt ggtaattaaa catcttacaa accttctaac tgactgaacg
      361 tcagaaaggt caaatgagat caaaccttgc atttgcgaca cagaagttat atttaacagc
      421 aactattatg ttacatggca aaaccaaatt attgtattag gcagtttgaa tacataagag
      481 aagtatttct ttctaatctt gatttttact gactagtata gtgcgaata
//
LOCUS       KCPA01002809             605 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 308822tic ultra-conserved element locus
            uce-6588, sequence.
ACCESSION   KCPA01002809
VERSION     KCPA01002809.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 605)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 605)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..605
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="308822tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>605
                     /note="ultra-conserved element locus uce-6588"
BASE COUNT          196 a           79 c          133 g          197 t
ORIGIN      
        1 ttgctgtgag atattgacat tttttgaacc gagacatcaa aatttgtgag gtgtttgcat
       61 gtggccatta cagtcatcgg ctaggttgga catttacaaa taaacaattg ttattaaagg
      121 atctgtgcgt ctgtggacta tgaatgatgc tggctttcag gagaaagatt gattattgta
      181 tactgacttt ttgtaatctt gtacaattgt aacgcatcac aagtggtgaa ggaatattct
      241 ggtttatttc ctagactgtt ataaatgtgt taggaaggca taaatgtaac aagtatcaca
      301 ctgtatataa aggtatcaat gtttgtcctg tataagaaat attaaattac aacagcagtt
      361 tcatttaaac ttctgggtta tgtttgagcc tgaaatttta atgaagtgca atactgagtg
      421 tgcctcatat cttgcagctg taaacataat ggaatgtaca tgtcaataaa gccactgtac
      481 atttttatac agtgaaagtc taacaatgtg taagcctcca gaagacgaga gtttcagcag
      541 aaaaagtagg aaaggtaaag tggtggttat ggaagtactt aacagaaaag ttgggtaagt
      601 gtgct
//
LOCUS       KCPA01002810             749 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 308932tic ultra-conserved element locus
            uce-7216, sequence.
ACCESSION   KCPA01002810
VERSION     KCPA01002810.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 749)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 749)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..749
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="308932tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>749
                     /note="ultra-conserved element locus uce-7216"
BASE COUNT          219 a          162 c          165 g          203 t
ORIGIN      
        1 tctcaatcca cactcagtga tctcagtgag tcattacggc ataattacaa tttgagtgtg
       61 agtttgtaga aaagtatcta tttttagcag aagaaaccta cagtccctga aaggagaaag
      121 aaagaagaaa atctgtaacc agcaaatcaa ggctatttga tgttaggaga caccccgtag
      181 atttacaatg ctcgcactca gccaaaactc acactgaaca gaatgcctac caggggttaa
      241 attcatatgc ctgcgctgca gcctatttct gtcaacactc agctcaggaa ataaacattt
      301 atgctttctg aaatgaaagt gtatttttga agactagccg tcagatattt tttgcccttc
      361 acactttcaa atgcttagcc ttttttgtaa gttgactgca aagtgcatca gtttgctagg
      421 caaaaagcct tgacaagtgc ccatggcatc attgtcaagc acacgagcgt ctagtggaag
      481 atggcaggag ggttggcaca aaacatgctt ccttcaagct tcttacctca ggggtacctg
      541 actcttgaga agcctttcaa tccttccaaa tgacgttatt gcagactgtc atctggctta
      601 tttggagtgc gctgtatcgc agataaacac gcgttttaac tgcaggtcag ggtacgagtc
      661 atcctgccag caaacgcctg agatgcatca gatggcgctg acttgggaga tggggagaga
      721 tcaaagttgt caccagtatg gtacatgct
//
LOCUS       KCPA01002811             632 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 309039tic ultra-conserved element locus
            uce-6898, sequence.
ACCESSION   KCPA01002811
VERSION     KCPA01002811.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 632)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 632)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..632
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="309039tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>632
                     /note="ultra-conserved element locus uce-6898"
BASE COUNT          193 a          126 c          108 g          205 t
ORIGIN      
        1 ccaatagaac tgttacctgt caataaaaaa tttcattcat ttttgtttcc tctctcaaac
       61 atagcaggtc agttgacagg aatttgtgcc tgaccaaacc caaaagcgta tttaaacgga
      121 ctcttccttc gttaggagac ataagtatga cttacctctg caattccgtt tgcttcccct
      181 gtacgttttg tacattcctg catctttcag catggcacac tgtgaagacc tagtaagcga
      241 gttaaagtca gatgacgcta acgaatccca gcgcaaatga ctgaatcaat aggaaaccag
      301 ccactgctgt ttaagtgtat cgataaatgt acctttattt tctcttgaat ggataagtgt
      361 cgcagttaag agtcctatgg atctcttaat tgaaagttaa ttttaaatca atgaagagag
      421 tcatttaaat attgatcagt cctttctaca ggaattgtta gctgattttt ttgaaacaac
      481 tttgtttaaa tgcaatcaat agcccacaat cagtgcgttc cataaaaaat tgacagatgt
      541 tcccaaaatg cctgctaggc ataatcttat ctgtttacat atgtagcata gatatttcag
      601 tccttttcaa atggcagaaa cgggatttcc tt
//
LOCUS       KCPA01002812             631 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 309148tic ultra-conserved element locus
            uce-3235, sequence.
ACCESSION   KCPA01002812
VERSION     KCPA01002812.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 631)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 631)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="309148tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>631
                     /note="ultra-conserved element locus uce-3235"
BASE COUNT          221 a          116 c          103 g          191 t
ORIGIN      
        1 cccagaatac ccctcttcca aactttttga tactcattcc tacaaatgta gataaaacta
       61 aaaaaattag ttgcatatgc tttattgagt gaatcataac ctaaagcaga acccaatgca
      121 agttttctgg ataacactgg attacaaaag ttgtaaacaa tgctaccggt tttattatgg
      181 cttgatgcag acatgcttca gtatattaca gactctcaat tttaaaatgt aaatggtaca
      241 ggatattgat aaaccaatta gcactgatgc aaagcaaatt cctcttttat ctcaattaca
      301 acatgacaac ttaataggtc aagacagtct aacatctgag acaagggcaa ttcaataaaa
      361 caactgcatc ttgatatggt aattaagagg aaatgtgaat ccattacatt gtcttgtgta
      421 tgtgtgcata tgtaggtgtt atttatttaa gcatgatgcc ctcttgctgc aaatccacat
      481 gaacacagag cccatctggt aagtgtagtt ttaccaggca aattttaagg acgcaactgt
      541 ggagataaat aattcatgag aagcccctaa aagatacaca atttcttcaa acacgggact
      601 ctccgtctat aaatttgcaa atgattttga t
//
LOCUS       KCPA01002813             543 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 309259tic ultra-conserved element locus
            uce-2260, sequence.
ACCESSION   KCPA01002813
VERSION     KCPA01002813.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 543)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 543)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="309259tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>543
                     /note="ultra-conserved element locus uce-2260"
BASE COUNT          171 a           78 c          105 g          189 t
ORIGIN      
        1 tcaaatctga actataagat tcatgttact aattttattt aaaatacaat gggtaatgat
       61 gtgtacctta aaactttggt agctttttgg atatcactgg ttgatctgcc ctaagtttgt
      121 cgttcttaat ccattaaaag acaggcctgc ttgtaaatcc acaggtacag ataaggagtc
      181 actgtttgac tgtgtctgaa cccttttcaa atgaaaaatg tcagtggcag aaagggaggc
      241 tgaattattt tttaaaaggg ttttcaaaga ttctcatgat tcctctggta tcagttaaat
      301 gtgacatgtc catagacatg gctggttttt agtgtgtaaa agcaagcaaa tgctgcagtt
      361 ttcatctctg tgtggagaga aaatgctgca gtataagtga taaacatgtt actttttcca
      421 taattaacat ataaagagaa atctagtaca atttgtaaca acgtgactgt gagaagcttt
      481 tatggttttt tttcctgttt ggacgcatat acatgtgtaa attagatata attaatccat
      541 aag
//
LOCUS       KCPA01002814             577 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 309368tic ultra-conserved element locus
            uce-7212, sequence.
ACCESSION   KCPA01002814
VERSION     KCPA01002814.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 577)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 577)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="309368tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>577
                     /note="ultra-conserved element locus uce-7212"
BASE COUNT          213 a           70 c           88 g          206 t
ORIGIN      
        1 tatttcaata tgtattcttt aaagaaaaat aatggaaatt ttaaactata tgtacatttt
       61 acaaatgaat gtctgtgtct aatctcaagt acatttgatt ggacaatttt gatgttccat
      121 gttcaattat taagcaaaaa tattcagtta tcagatagtt aattaagtgg aactgactgt
      181 attcattaaa atatttgttc caaacaaatg tatttaacat tcagatatta tgcagaatag
      241 gtgacaattg catatctcca tggagatcaa taatgggatt cagatcattg tgtaaagagt
      301 ctgcaagttt aatgcagaga gaatgtcatt attatttctc tcttaatgat ggtcattatg
      361 cgcaaacact gattgaattc catttgttac ctgcatttga gctgagagga ataattacaa
      421 tttaagtgtc tccattaaaa ttcataaaag aatatgaatg caaaaattat acttgaaact
      481 gacaaaatat actttgagga tataaattgt gttttctgat aggcctctta aaagtattaa
      541 aaatagcttc attttaataa gatggcatat aaagatc
//
LOCUS       KCPA01002815             531 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 309480tic ultra-conserved element locus
            uce-5905, sequence.
ACCESSION   KCPA01002815
VERSION     KCPA01002815.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 531)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 531)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="309480tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>531
                     /note="ultra-conserved element locus uce-5905"
BASE COUNT          142 a          113 c          109 g          167 t
ORIGIN      
        1 tgtgtggaca ggaattagtt catggatggg tccggtatgt aaataaaagc cacttgcatc
       61 ctcattatgg gggctctttt gaataaatgt tagcctttaa gtgccagctg tcactctatg
      121 catggcctcc cttcttacaa ctaacctctc tgtcacctcg ccttgtctcc ctaacttgtc
      181 ctattatgca gtaccaagct gagtcattgt ttcaagcagg aggtgacatg ttaatagctt
      241 aataatagta taatctcgca aataataata tgctgtcaca ctgtctgaag cacaatgttt
      301 acaggagaag tggtaatgta tgatgacagt aatttgaata aaaatgaatt tactgctctt
      361 gtctcatttg cagtaaattt tcgcatcttt catgcacaac tggtgctcca tgacctcttt
      421 cattattgtg ttctcagtgg ctgctgcctg ctttaaagtg aaaggcaggc aaatgaaaca
      481 gaaacctgca gcaaggggtc tccagccgcg gcttctggaa atctcacttt g
//
LOCUS       KCPA01002816             717 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 309591tic ultra-conserved element locus
            uce-6184, sequence.
ACCESSION   KCPA01002816
VERSION     KCPA01002816.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 717)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 717)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..717
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="309591tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>717
                     /note="ultra-conserved element locus uce-6184"
BASE COUNT          192 a          133 c          158 g          234 t
ORIGIN      
        1 ccatttattg taagctgaaa gaggcagact ggctatagtt tctggcatgt gcattattgt
       61 caccatgcta cgaacaccat ggctgcttcc ttcgtgctga caattgaaaa ctccaatatt
      121 ccatacctta aaaatctagt gttatagttt cttgcatggt tttccactca ttcatgttgc
      181 tcctcagtaa cttagcaatg accagtcaag atatgcacac accatattgt tttacatgtt
      241 tgactagaac gctgacagat taataggaag ggtaaatagc tctgcactct gtggtggctc
      301 agtgtgggct ggcaggattg actgctgcca gactttgttg tatttgcaca gaggaagccg
      361 cagcaaaagc ctgctggggc aaggtgacgt gggtcatggg tatttgtttc tcatctctat
      421 agaaaacaat tgtcctctca atggaagaca gcttttggaa actatgtggt gggcaagcat
      481 ttgtacttcc agagcactaa ataaaatgca gagtggcaga tgtgttaagt gtctgtaata
      541 ccatgcatat catatttgca tgtatttgac ttgctcagtt tagaagaaag agtattgatc
      601 agattttcat gggtatttat tctgtgctga atactttttt tcttctttaa aagagcacaa
      661 gggctccatt tgtccatgat gtaggtactt cggttattgc ttttaacaat tgctaga
//
LOCUS       KCPA01002817             403 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 309695tic ultra-conserved element locus
            uce-6052, sequence.
ACCESSION   KCPA01002817
VERSION     KCPA01002817.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 403)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 403)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="309695tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>403
                     /note="ultra-conserved element locus uce-6052"
BASE COUNT          131 a           54 c           87 g          131 t
ORIGIN      
        1 tattattatt taaaggaaac cgatggagaa tattacaaaa gacatccttt taagagcctg
       61 attgactttg aaaccacttt agtcttccag tttttaaaga ggtttattct gattaactga
      121 cctgaatgtt aacagaactg gaattttaat ttgtattcag actgtaagaa tatcatccac
      181 tcagatgaga cagtgttgtt taattaggtc tagtagttaa ctcagaagaa agtaaatgta
      241 ctgctagagg tttggaagac tgctacaggc tcctgggatt tgcgggagtt tggagaagct
      301 taaaaataag aagtcagtaa ttttaggaat tagaaatgag tgcttagaag gtattggaaa
      361 ggttctgcaa agcctgtagt cagcatcttt taaccttgtg ctt
//
LOCUS       KCPA01002818             478 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 309799tic ultra-conserved element locus
            uce-2319, sequence.
ACCESSION   KCPA01002818
VERSION     KCPA01002818.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 478)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 478)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="309799tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>478
                     /note="ultra-conserved element locus uce-2319"
BASE COUNT          144 a           98 c           86 g          150 t
ORIGIN      
        1 ccccctctga tgctaagcat gatttacagg cttgagttat tatttatcat tattcatttt
       61 ctgtcaccag tgcattgaag gttaatagaa atgccagcat gctcactgat ttacttagta
      121 aaatatttgt tccaaggttt aggtcagatg attggtgtct gagtgagctt gaggtttatg
      181 cattatgaaa agcaagctga cttgaccttg agccactagc accagcacta tatattactt
      241 tagtggagtg accttcagag ccccaagaca cactagatgt attcaacaca tgttttcttc
      301 tcccatacta ctgacattgt atacattcca gctgaactta tgtaatgtaa gatgatactc
      361 acttttcatc taatgaattt gagtaggatg acacattcaa ctaaaacacc tcagaggtaa
      421 caaactacct ttgaatccca gatggaccga ggctcaacaa gtacttcagg ctaattga
//
LOCUS       KCPA01002819             690 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 309906tic ultra-conserved element locus
            uce-4360, sequence.
ACCESSION   KCPA01002819
VERSION     KCPA01002819.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 690)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 690)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..690
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="309906tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>690
                     /note="ultra-conserved element locus uce-4360"
BASE COUNT          194 a          133 c          141 g          222 t
ORIGIN      
        1 tgatgaattg taggggagaa ctacccaagc ctgtctgttt tggcttagat cagcttttct
       61 tctcattata atttaagtct ttaagggtct tcagcaggag cctgtaaaag tcagatcact
      121 cactgctgtt gaatggccac tcgggcggtg attcatgcgc gggcgtctcc tttgtgcccg
      181 cagaacaatg gctgtgtgcc cgcgccggca cgcaaagggt taaaaatcct gcaagagctg
      241 aaaactatgg attgagcaaa atctccctgt cagctctctg tgattttgct gagagcactt
      301 ggacatgctg gcattggatt tacaaattga aaatcattaa taattctaac caggctgtga
      361 taaatctgag atcagtctcg atgaacctgg acaccatttc ataaatcaaa aagattactt
      421 aggaattttt taaaatctga cgtcaaaatg tcatggttac taatggtttt tgtagatctc
      481 ttacagtgat atatcattta tctacgctac atctaaaatg tgacaccagg gcagaaatgt
      541 gatgtcttta atatcatgaa tacattttat cccataataa aggtattaac aacttcttgc
      601 tgtgaattgt acttgaagtt ctgtgcctga tttagtgcta ttgttatatt aactggtttt
      661 cccccaaatt tgtgcagaca aactgttgct
//
LOCUS       KCPA01002820             487 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 310012tic ultra-conserved element locus
            uce-4744, sequence.
ACCESSION   KCPA01002820
VERSION     KCPA01002820.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 487)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 487)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="310012tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>487
                     /note="ultra-conserved element locus uce-4744"
BASE COUNT          151 a           96 c          101 g          139 t
ORIGIN      
        1 ataaacaaac aactgaaaag atgcaatgag gtgtaagaat agatttgcac agggcagaca
       61 actgaacatt taatttattt acctctccta acagatacct ggggtgacat ttattaataa
      121 acggcattat caggtgtctg atatgtagct cacagaaatt aattacccag cccatggtaa
      181 aaccataaca agcctgcagt gctgtaacat ttgtgctaat tgaaaatgag ataagtgctg
      241 tgggtgcaat ttgcattcaa tgcagtgtat taattatctt cagttctctt catgataaat
      301 atacctgact gaaccactct gctaatttac tgggtaatag agtcataagt ggattccctt
      361 aggtgaccaa ctacaggcat cgggctcttt ggaacatcaa ggccttcccc tttcctgagc
      421 acttaaatgg gttagcagcc atggatcgct tttcttgcag gctgggctgg aagtacatgg
      481 cagcaaa
//
LOCUS       KCPA01002821             446 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 310118tic ultra-conserved element locus
            uce-4729, sequence.
ACCESSION   KCPA01002821
VERSION     KCPA01002821.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 446)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 446)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="310118tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>446
                     /note="ultra-conserved element locus uce-4729"
BASE COUNT          162 a           69 c           74 g          141 t
ORIGIN      
        1 aattatcaac aaagggaaga aatcaaattt tacactgact acttctcact gcttatctta
       61 caaaattatt attatttgcc ttcttagtta cttctattca tcagggtgat gtgtgcagat
      121 tgtgagaatg ccaaatattc tccaaaaact gatgagtaag cagctgctct ttaaaccctt
      181 cacagtttat agccacattt acataacatt aaataagtca acaaaggcat cattagctcc
      241 cattaaaata tgagcgaaga aatttaaacg aacaagagaa gctaattggt aagtaatgtt
      301 gtgtatcaaa aattatgact ataagattcc aaagttaatg agaagcccta caactgtgtt
      361 tattaaatgt ttaaaaatta aattaaaggt gaacatagaa aagttttctt gctgctgttt
      421 gggctgagtg agagctatga aggttc
//
LOCUS       KCPA01002822             601 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 310228tic ultra-conserved element locus
            uce-5972, sequence.
ACCESSION   KCPA01002822
VERSION     KCPA01002822.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 601)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 601)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="310228tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>601
                     /note="ultra-conserved element locus uce-5972"
BASE COUNT          219 a          118 c          108 g          156 t
ORIGIN      
        1 atactttatg taaacagaga aatcccaaac tatcataaca aatcctcccg tttgaaagat
       61 tacaagcgtt tgaaaaccac attatatgac actccataaa gctgtttttc aattgtgcaa
      121 ttacctattc agcagttaaa taaaagtgaa atattgactt aaaacaatgt taatggtcaa
      181 agaatcatta agaaatcctt catcataact ttcacagcag gtggcctgta aaatgatcaa
      241 gaataatgtg ctggattctg tagccaccaa ggtcagtttc tgcatacaaa tcttgcaaag
      301 ggaaaaaaaa gaccttcaga aagtgggcca ttcatctgaa ccaagttcag agaatttcca
      361 gcactgtgaa aagatatgtt atgcaagcac atagatgtat tcagtggggg tagactgaac
      421 cagctacatg gagactacaa aggagccctc ccatggctca tgaataagtc gaggaaatga
      481 tcagaaaaaa atgcagagat gtttagacag atggcccact taaaatgcct gggacagggc
      541 ataagcaatt ttaatgaaac tttagatcta ccatataaat tttttccctg ccctccccca
      601 c
//
LOCUS       KCPA01002823             718 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 310339tic ultra-conserved element locus
            uce-2152, sequence.
ACCESSION   KCPA01002823
VERSION     KCPA01002823.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 718)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 718)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..718
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="310339tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>718
                     /note="ultra-conserved element locus uce-2152"
BASE COUNT          217 a          114 c          152 g          235 t
ORIGIN      
        1 caggcattgc ccagatttgt gtaagcttta ggtttctttt aaagcaataa ctcatgtttg
       61 agaaatggta gttaataaag gagaagcact tctaaagatg ccaggtgtta ggagaatgag
      121 actgtgagca agcacaggac caaagttggt tttcataggc acgagcagtt gaaattccta
      181 caattaataa gtgcagtgaa ggggttaaaa agctattggt tagtttgaga aatgttcttt
      241 tttagttttt tcctggccta gtctagagca accacgtgat acactgaatg cctgccagcc
      301 tctttcttgt tgatcctccg gagaccatct gtgctggggg cattgattag agtgtgtctg
      361 ctgggattac atcttttctg ttgccatgcc aactaatcag ctgattttgg ttaccacaga
      421 aacaaaatgt cagagctcac agtacggtaa catgaattca gcacaacaga aaatgttttc
      481 ttaattggag acccttttga ttttttggat tctatgtaaa aggcagcttt ttaaaataag
      541 aactatgcca attttattta ttaaaaggaa tgtgtaaaat tctactttac ataaggaaat
      601 taaatccctt cataagatgt ataaattttt gtatgaggac tgtgtttttc tattaaaatt
      661 tgtcaatgcc agtgcctcta agagctttgg cagtgtgagc ttaagaaaga aacatttg
//
LOCUS       KCPA01002824             583 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 310450tic ultra-conserved element locus
            uce-5017, sequence.
ACCESSION   KCPA01002824
VERSION     KCPA01002824.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 583)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 583)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..583
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="310450tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>583
                     /note="ultra-conserved element locus uce-5017"
BASE COUNT          153 a          108 c          143 g          179 t
ORIGIN      
        1 ttctgcagtg cttatgttga actccttctg ctctgaggct ccacagggaa tagaagtttt
       61 ttttatgatg cagcaactag tcaccaaaca ggccaggctg agtggtctca tgttatggga
      121 aagattacac cctgatcatc aaacttttgg caggattgtg ccttgtaaaa atcactccca
      181 ctggaagttt tgaggcagct ttttcaggag aaggggagtt aacacagcag cagcactttt
      241 ttattgttaa atggatgcat atgctggaga cactacaaag gaatttgcaa gtttgtcagg
      301 tttcccagga atgtctttgg caggtctttg tctggaattt tctggagact ggaacacttg
      361 tgctctgtat gcatatgtat atcctgtaag ctggtaagct cagagagcaa agaaggaatg
      421 tcatctttgg ccagatcggc cttggtacag atttcacact ttgttagccc cagttgttat
      481 tgccggttca gatctgtatg taaaatgaag gtcctttagt gtcagcaaga tggccagaaa
      541 ggtggttcta gaaaaattgg tacatttcac tgttcagaca gtg
//
LOCUS       KCPA01002825             646 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 310556tic ultra-conserved element locus
            uce-1236, sequence.
ACCESSION   KCPA01002825
VERSION     KCPA01002825.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 646)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 646)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..646
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="310556tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>646
                     /note="ultra-conserved element locus uce-1236"
BASE COUNT          219 a          100 c          135 g          192 t
ORIGIN      
        1 gaattagccg cgctcgtgca agaggggaga ggaaagggag agggagggaa aaaagtcaac
       61 aaaaatcatc cttgtaaaat aagccatatt acctctagga ttgcccccca aataataaag
      121 gaaggtggat cgaaaggtcc cagattgagt gacagtcata tttctggaac taactggttt
      181 ttaaaagaaa aggttaggac ggatggagaa tgcgggagag agatggctga gctctgaaat
      241 tgcttacaga attacatttg tttttcttgt gattttatta aaagtcactc ctcatctcca
      301 gaatgcgtga aaatatctac tttccactca gatacaccac attaacttgt tggaggcgaa
      361 tttgtttgtt tgtctatttt atttatttgc cagataagat tgatgcagtc ttattagcgc
      421 tatatctagt tagaggaaga gataaggatg agatgttttc tttttattcc aattactaga
      481 cttgtcacct aactgaataa ctgatatatg attatttatc ttgagtaaat agaaatcaga
      541 aaagcagcca acttaacaca gacaaacaaa atatgtatgt tccttattac tatataccac
      601 ctatgcaatt gaagggatta aaactgtggc cttaaaggag aaagtt
//
LOCUS       KCPA01002826             500 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 310661tic ultra-conserved element locus
            uce-6173, sequence.
ACCESSION   KCPA01002826
VERSION     KCPA01002826.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 500)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 500)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..500
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="310661tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>500
                     /note="ultra-conserved element locus uce-6173"
BASE COUNT          169 a           92 c           85 g          154 t
ORIGIN      
        1 aaatgtaaga aagcttgaaa gacttaaacc tggtttcatt taataagaga aaataagaag
       61 cctgccacac agaaaattac taaattatgc tcggggttcc actcttctct tttgcctcag
      121 gcttttggga cattaaggcc atgatataaa tcctggtcag tgttttttcc aagtagcaga
      181 aacgagagtt tattagcatc acagtggttg cctcaataat gacaaaacag ttgctcatta
      241 ctgctcatta gattcatatt agattcattt gcaatagcaa tacatcttct attcatactc
      301 gactgcaaaa caacagatat gatttgacac ctgctgtagt acagaattca ttagaaagca
      361 ataatacaaa taggatttcc atggatggag tcttctgtct ctgatgggtc taaaatttgt
      421 catttaatgc agaatttata taggataaat atcacagcag gcagtcagct tcctcaaatc
      481 atgtgctcca ataaaatatc
//
LOCUS       KCPA01002827             666 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 310775tic ultra-conserved element locus
            uce-4866, sequence.
ACCESSION   KCPA01002827
VERSION     KCPA01002827.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 666)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 666)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="310775tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>666
                     /note="ultra-conserved element locus uce-4866"
BASE COUNT          183 a          150 c          158 g          175 t
ORIGIN      
        1 caaagctcca tttgtgcaag gtcttcaccc ttcctgctta ccatttccct agggagcagc
       61 agtgtgttgt ggaaagtact ggtaactaaa gacagcaatg caaccctaag cctgatggct
      121 ccagcccagt ttatcccctt tactgttccc tctcctgttg ttttttttct ttcttttaac
      181 atgcaagttg ccatgaaaaa tttgttaatg aaatatttgc ttagaagtct gctctgggct
      241 aggctgataa cctatctgtg tttgagtttg gcttcccata ttctaaatac tcatcttctc
      301 actgtttagc ttattgattg gtttggcagg aaaagcagcc ttgtcatcag tgaccaaggt
      361 caaaccaaac aaaaagggac aggaaaaaaa aggaaagaag ttggacagac gagctcagtg
      421 agacaggagt ggaatatctg acctcctgcg actttcctag gagatggttc ctggtctgcc
      481 caggagcctg atggcttttg caaggtcaca agaaatcact gacatcatca gaaccactca
      541 gaaaccgcag gagacagaga gctgagagtc ccacagaggg aggaggtgga cacgaccaca
      601 gcaaggctgg atatctcctg agggctctgg tgcagagcca atggggtgct gagtcaaata
      661 tctcaa
//
LOCUS       KCPA01002828             765 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 310884tic ultra-conserved element locus
            uce-5615, sequence.
ACCESSION   KCPA01002828
VERSION     KCPA01002828.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 765)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 765)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..765
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="310884tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>765
                     /note="ultra-conserved element locus uce-5615"
BASE COUNT          227 a          144 c          178 g          216 t
ORIGIN      
        1 tgaagcattt tctgtgttga catgatgttc gcctgtccga ttgcatcctt cccaacagac
       61 agcagagaag caattacaaa aaaagacatc tgtgccaagg tttggctagc cagggagggc
      121 aagctcttgt gtttaagagg tagggaatcc aatcgatgaa aatgtctggg cctgttagca
      181 ccaataaagc tgaaggccac tgggaagctc agagagggtc ttttgttgca gagatagaaa
      241 agaggccgaa gctgtgacac ttggggagga atagggtcag ccagtacgat catccatctt
      301 cctcaatggc agctttctgt cagtttttaa ccctgctcag cagaggatct aaacccctat
      361 tgttggcacc agccaattct cagccaagtg taaatgaagt taatattcac tgaccttatg
      421 catagccaat gaaggccctt gatgtcatcc tggaaataat gttatctgac acttcaaaaa
      481 gcagatgttg gcaggttgtt tgtggttttt tgctgagcca gtgcgcaaag acgcattgtt
      541 taggcattta aactgatttc cataataacc acaaataggc ctttttgacc ttaaattgac
      601 atagttatgg ttttagtttg catatcatgc ttctgacaaa gtctggctaa ccggcactaa
      661 gtggtcaggg agaagtagct tggttcactt agataagaaa tatacgggtc agtgagaaat
      721 ttatttatgc tgataaaaca gtgaataatt aaaatagttt aacta
//
LOCUS       KCPA01002829             614 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 310994tic ultra-conserved element locus
            uce-546, sequence.
ACCESSION   KCPA01002829
VERSION     KCPA01002829.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 614)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 614)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..614
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="310994tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>614
                     /note="ultra-conserved element locus uce-546"
BASE COUNT          209 a          100 c          106 g          199 t
ORIGIN      
        1 aatattactc ggcatgtttg tcaatgtgct gtataattat taatttgttc attgaggcaa
       61 ctatataaat aaatagaaag cagaatgcca tgattaaact aacattagaa atccagggtc
      121 aaggagccct gttatacagg gatctaaata gctttcccag gtcctatttt tacatctcca
      181 tacagatctg caggtctgta actgcgaatt aattggcaca catttagatg ccaacagagc
      241 ttttgtattc tcagtgcaca ttttgtcttc tcagagtgag atgttagtaa tggaggtttt
      301 aatattaccc ctaggggagc accagaaaat cttaacaatt tccttcacta gagtattttc
      361 attagagcta aatgctgtgc aatttacatt tgaaatcagg tgtagggtaa gtataatgtg
      421 acaagacatg ttgcaatgtt agtttttttg ttcaaatgtt ccttatttac tgcaatatac
      481 cctcaaaaga taagcatgca attaaaataa ataccttgat ttttaaccac tcctaattga
      541 actgttattg ggataataga agcacaaaat agaatcaggt ttaaaaggac ccaaagcaca
      601 agattaaaat atta
//
LOCUS       KCPA01002830             407 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 311096tic ultra-conserved element locus
            uce-5321, sequence.
ACCESSION   KCPA01002830
VERSION     KCPA01002830.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 407)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 407)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="311096tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>407
                     /note="ultra-conserved element locus uce-5321"
BASE COUNT          133 a           78 c           76 g          120 t
ORIGIN      
        1 aaaggatgaa tattggtagc tggagaatac gttctgcctt cccctcatac tgcagctgga
       61 cagcaatagc cagccttcac ttatttattt atttcctgca cagaggggag gaaaatatag
      121 gtccatgaat caatctagat aatggggaag gctgaatgta ataaataata cagtaacaac
      181 cctaaactaa tgagctgttg ctaaggtaca tttcacaggc tcatcttcta tataaaaagt
      241 cactaataat cccttggtgt aatcagatga taaagctttg ccataaggca acacctgtgc
      301 aattaaagct gtggattctt ttgcacgttt cattaatttc aggattttgt aaaggcacaa
      361 tgactacact aataatctag tctacttgac tccatgtcta ctggaaa
//
LOCUS       KCPA01002831             602 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 311206tic ultra-conserved element locus
            uce-675, sequence.
ACCESSION   KCPA01002831
VERSION     KCPA01002831.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 602)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 602)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..602
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="311206tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>602
                     /note="ultra-conserved element locus uce-675"
BASE COUNT          200 a           91 c          109 g          202 t
ORIGIN      
        1 taaatatatc tttgaaagca aacctgtatg gtcacattca gtaaatcttt tgttttgctt
       61 tcattaagtc ctgatttagt caggtacaaa tggaaaatct gtagtagctt taaagtaaaa
      121 taaaattggt tttgattcag ttcaagtcaa ccatctcatt taaaattagc ccagaggtct
      181 tgtaaaaatg ctagtaatct aaacataata atgcacattg cccaattgct actgtatatg
      241 atataggctc agtgctgtaa tgctttgaca gcccattact gaatgtaatg aacagctatt
      301 tttaaacaga agaaattcaa gttgacagct tggcaatgaa attcagctag tggcataatt
      361 tttgtcatct tcagtataga gagtggattt cagttttgtt taaagaaatt tgtatcatgg
      421 actttattgg agcaagcatt tttttgcttc agtttactga agagcttgaa ctaaagctgc
      481 attttgtcaa atcctgaaac ctgcactcct gtcagagctg tgagaagcca gtgattaata
      541 aaaataggtt gaagtcttaa ggaggagaat gtactagaac tgaattttta atcacaaact
      601 ca
//
LOCUS       KCPA01002832             706 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 311316tic ultra-conserved element locus
            uce-7787, sequence.
ACCESSION   KCPA01002832
VERSION     KCPA01002832.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 706)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 706)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..706
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="311316tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>706
                     /note="ultra-conserved element locus uce-7787"
BASE COUNT          236 a          145 c          128 g          197 t
ORIGIN      
        1 tgggaatgcc cacagtgcat tggcactttc caaaaagcat catgtcccct ctgaagaaat
       61 cacagtctaa ggagcaggat gtgacactaa actgagaaat tattctaatt tgagccagca
      121 tgccttgttt accccttact attttttgac ctcactgtta atatgactta acagaaagca
      181 aaaaacccta tcgtccggca caattgggga ctaagttcat tgagagcagc tataaagcct
      241 taaacaagcc ctttattttg tgttttacga agtgtcataa ggagttaata ggacacagct
      301 gtacaggctc tttctaacaa gcagcttctg tcgctttggt caccacaggt gtctgtgtaa
      361 cctgcaaact cttattacta gtgtatcaaa gttgtgctac ttaatagatt tctttagtaa
      421 aacacaacaa agcaattaca tggctgttga tcgttagtca tcccctcaaa cacagttttt
      481 caaaagaaac tacactgcaa ttttttgtca ttgtaaaata aaagaaacta gagaattaaa
      541 tagaaaagca gacaatagaa cagcaggtag tcaactgaac ttagccacta cagatggttt
      601 agaaatagtg tttccttcta caccaacttg tgggataaaa gaaaaggagg aggctcctta
      661 ctgcccatga atggcaatac caaaagactt aagcaacttt ccagtc
//
LOCUS       KCPA01002833             716 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 311427tic ultra-conserved element locus
            uce-438, sequence.
ACCESSION   KCPA01002833
VERSION     KCPA01002833.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 716)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 716)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="311427tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>716
                     /note="ultra-conserved element locus uce-438"
BASE COUNT          202 a          156 c          132 g          226 t
ORIGIN      
        1 aattgctcac aacctgaatt tgtctcactt tgatattgag gcatcttttc ctcccccgag
       61 aaacccccac ctgtaagaag gtcccatggt actttactct ggagaactgg gtgagtccat
      121 ggcaaataca gtcaccagca gatgtgtcca catttcacaa caaagaagat atgaactctt
      181 tgtacctatg ctccctggct ttaagaaaac attgtttcat gttctaactc taatcagcct
      241 tttctgcccg ctcagagaac agagaagttc attgttatat gcagctgtca tttgttccat
      301 ctccttgctc tttctgactt caatatcttt gaggtattta gtgaaagtaa tttcagttag
      361 aaatcttctg ccctttcagt aagtgcaagt atagcacttc atcaatggcc aaagaattct
      421 aagctatctg ggatgtatca ggacagttga taaaacctca cagagcaacc tatgatagta
      481 catcccatca taaataaaaa aaaaacagaa agggcctttg tcagtgttta tctgtagcgc
      541 ttttattctt tgcccttgat ttcctcttca gaaaattgat gcaaccttaa attgaagcag
      601 gaggcttgac aggtgatggt tagtgtgata actgctcaga tttcatcagc cagtgttttt
      661 ctggtggtgc aattgtagga actttcagct agattacctg tcatccacta catcag
//
LOCUS       KCPA01002834             624 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 311537tic ultra-conserved element locus
            uce-6758, sequence.
ACCESSION   KCPA01002834
VERSION     KCPA01002834.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 624)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 624)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="311537tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>624
                     /note="ultra-conserved element locus uce-6758"
BASE COUNT          171 a          144 c          125 g          184 t
ORIGIN      
        1 caattagcac catctctgta cacagccatg acaaaaggga agccaggagc ctgaatattc
       61 acccaaagca cttaaaaggc cagcatgaat catgagggtc ttgcatgttt tttgtttgtg
      121 tgcagctagc agtgtggtgt gctattcatt ccaggttaag ctttcaatgc tgtctaataa
      181 gtggtccttg tacaaaaacg tgatctgtgc ttttccagat atttgtatgt caggcagcta
      241 cacagcagca acttctgtaa tcccttctcc tgcagttaaa gctactagaa aggcttaata
      301 atatcccaga ggcaaagatg aaacggtatc tccacagcta ctgtttgctg tagagagctt
      361 ttgaagtcga gcttaagatg tctttatttc cctaccagaa tccagtgttg tcatgatgat
      421 gtcttttcgc ttgttccaag aggctgtagt gttcccataa agcattatgg aatgagaaca
      481 gcttttcatc aggggctcct tgagtcagta aatacagttt gtcactacag aaacccacag
      541 ccaccctacc agcaatctca atttaaagcc ccacactctt ctttatcagg tttatagcag
      601 tctcagcctt cactggcagc ttac
//
LOCUS       KCPA01002835             638 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 311647tic ultra-conserved element locus
            uce-1497, sequence.
ACCESSION   KCPA01002835
VERSION     KCPA01002835.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 638)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 638)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..638
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="311647tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>638
                     /note="ultra-conserved element locus uce-1497"
BASE COUNT          192 a          133 c          125 g          188 t
ORIGIN      
        1 accgccactt tatttaaact attgtgcctc cttcagtaaa cattcagtac atgactgaac
       61 cctgtatgaa cttgtgcttg ttgctggtta aatagattct gagcttaaat gaaaaggggc
      121 tgctattgag cacaggacaa aaaagttgca tgtgcattaa tttgcccaca cacaagctct
      181 taccccccaa aatactgtgt tcacaggatc ttttattgaa acacctctag gcctcaaagt
      241 actaaactga aagcaagctg ttaacagaaa tgagtaatta ttgaagctct aacaggcagc
      301 tttcattgaa gttgattaca gcagccatat aatcactttt acggatgctg taatcacagt
      361 agcagggaat gcttgacttg gttcttattg ttttcactca gggtggaggt agggggcctg
      421 caagaaaccc gttttaccac ctcagtacaa tttctgctgt aaaggaaatc tacacagcac
      481 tgaatgaagc agagaatcat tcattctttc tttattagca ttttcccctc cctcacatga
      541 gagtctgttg gagccaggaa attgctgtta ttcaatatgc aagccagagg ttgtaatgac
      601 catttgtgag ggtatgacca acaattacag accttaat
//
LOCUS       KCPA01002836             674 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 311756tic ultra-conserved element locus
            uce-4716, sequence.
ACCESSION   KCPA01002836
VERSION     KCPA01002836.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 674)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 674)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="311756tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>674
                     /note="ultra-conserved element locus uce-4716"
BASE COUNT          239 a          108 c          133 g          194 t
ORIGIN      
        1 cccccaacga gtcgaaaaga aaattgttac atctacagca cttacaatgt cctacacact
       61 tctcatcagt tctgtggact tttgaaagcc acagtcctga atcagagggt ttaacatata
      121 cgcactaggc cacaccatac taaactggaa acaaaacata atggctttct tatggcagaa
      181 cctacaggcg gaagctataa attaaagatt tatgctttgt cttacgaaat gcagcatgtg
      241 aaaaaggata ttgagacctg gatggatgca tcaagaagta tcaatgattg ttacctgcag
      301 aggtgttaca agaaatttca tctgctgcaa cgaagacgaa ttgatttctg caagagaaga
      361 taaaattcac aatactgctt gctgactggg aaatgtgcta gctgccaatt gacttgatgt
      421 ttacagataa agggtgctta attttaatga atgtagcaag aaaaagtgtt gatatagagt
      481 ttataaggat catgaagtag acatgctggg atcttttaaa tgaaataatg gtgacattcg
      541 gatatggact atgtacaaac tcttgcattg gaagcttcat gtttagtgtt acagatatgt
      601 caatatattt atgaagtcta ataaaaataa aacaatatat tgatatagct attaaagggc
      661 actactgcaa atta
//
LOCUS       KCPA01002837             529 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 311862tic ultra-conserved element locus
            uce-3381, sequence.
ACCESSION   KCPA01002837
VERSION     KCPA01002837.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 529)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 529)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="311862tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>529
                     /note="ultra-conserved element locus uce-3381"
BASE COUNT          165 a           92 c          109 g          163 t
ORIGIN      
        1 ctttttgatg ttccttcttt atggacctct agttacaata tttgcagttt ggatgaatag
       61 ctgaaggtgc accaaatggc agcattcaga ggtatttgac caagaatgat tgacagtgtc
      121 tgtaactact tattatgtca aagcttcagc acaccgattg atgggaaatg atgtataata
      181 aattagaatg atcacacatc atttcccatc gattgaaatg ccaaatcctt tgatggagta
      241 atgagttatg gccaatacta ctcactgtct tagtaggaga ttgattgcat atcccttcat
      301 caatgtgatc aaacaactaa ggaatccaaa gtacacatgt agtctactgc ggtttcagtg
      361 taatgcgaga gcaatagagt cagtgttgct tctgtggtgt aacctggggt atatgtgagg
      421 catgagcaaa catgtggcca aattcattca atacagaaac tttaaagaaa tgtaagctga
      481 ttccctctca gtttttcata tcaacaggag acgatgaggt taaatttac
//
LOCUS       KCPA01002838             791 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 311972tic ultra-conserved element locus
            uce-502, sequence.
ACCESSION   KCPA01002838
VERSION     KCPA01002838.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 791)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 791)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..791
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="311972tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>791
                     /note="ultra-conserved element locus uce-502"
BASE COUNT          255 a          154 c          156 g          226 t
ORIGIN      
        1 tataatcact gcatgaagat ttttgcaaag gagaatattt tctcttttag actcaaagta
       61 attgctacag aaccacagac cttaattaat tcaggaactt gagaggagtc cagcagtctg
      121 caaatgccgc tgtagtggct tgtagggata actacattct gtaccaagag gtggggaaaa
      181 aaattatatg agttttgaaa cacaatctaa cagaaattat ctcagacata attcaagtct
      241 ccagctcttg catgtcattg agaagtggtc tggttgtact taaaagcagc aatttcaaac
      301 ctaatagata catgtcaggc aggacaggca ttatgtagca aaaaatgaaa tggtaccatc
      361 tccttcagct gatggaagta ttgtctcaaa cgctcctcct tggcctgtac ctctgagtca
      421 ctcatgctgt caatcaagtg ataaagaaaa tagccaacag cttctgtgga aaaaaacaag
      481 agaaagcatt ccactaaaat taccgagact gtcatgttat caagattaat ttataagaaa
      541 tcattttggt gtgagatgtc accctgatga gaggctctga aatggcaaca atgatcactg
      601 aggcatagag attatgtggt ttgggagcac atatctaact ggtgagtgaa aggaatatta
      661 attattttca gacctagtga cagcttttca gtacagaatc ttacttcaat ctattttttt
      721 ccactactgt gtgacagaag tggtactgcc caaggccttc cccccctttc ctgcctgcta
      781 ccccaaatag t
//
LOCUS       KCPA01002839             668 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 312082tic ultra-conserved element locus
            uce-254, sequence.
ACCESSION   KCPA01002839
VERSION     KCPA01002839.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 668)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 668)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="312082tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>668
                     /note="ultra-conserved element locus uce-254"
BASE COUNT          197 a          118 c          122 g          231 t
ORIGIN      
        1 atactccaga taatggggag agggtggagg ctcaaagtca ttacagcaga atgtaccata
       61 aatcttacta agtttatgcc gcccctgata caaacttcac tctgacttgt tctctctggg
      121 gaaggttcac agttgggttt tttttaattt tggggtgagc aataatagtc tttgtaagat
      181 ggctgcagtg tcagcattta tcttgaaact cttggatatt agttttgact gcagtcacct
      241 ttctgacaag tgttattgcg actgtgtttt atatccctgt tcaggatgat ttctaatgat
      301 aatgctctgt ctacctcact gcttcacact aaattataga tgccactatg acaggacaaa
      361 ctatatccaa gtgctaaact ctactccctt tgtgtgatgt cagtgccttc actactttgt
      421 gcctagaatt aaaatcagga taggaagata tgcaaaacat ttctgcttaa aaataatgtt
      481 ctggcagtta ttaaacaagt gatatttcat ttaatcagct caaggggatt attttaaatg
      541 aaaaggcaga gagtatgatt ttattaacac attcctgccc tagagtccta ctgtaataat
      601 tctttacttg actaaattaa aaagttataa ttcagtcctt tcacttatgg atagttaaat
      661 ttcattag
//
LOCUS       KCPA01002840             736 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 312193tic ultra-conserved element locus
            uce-4585, sequence.
ACCESSION   KCPA01002840
VERSION     KCPA01002840.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 736)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 736)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..736
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="312193tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>736
                     /note="ultra-conserved element locus uce-4585"
BASE COUNT          235 a          138 c          133 g          230 t
ORIGIN      
        1 ataataataa taatagctgc ccattgtata gggcactgca tgcaatattt ttaatgcctg
       61 ctaatgaaat gtgctattaa ttattaggat gtggtttgca ccagcacgtc tcaactgtgt
      121 attcaaagtg acacaacttg aaaaactgcc tattggaaaa tcctccttaa aaagcaaatg
      181 gtatttaaat cagcatgaga acttgtagct cttaccagct ctgctgcaga gaaatttgca
      241 gctaaggggt taatcagatt aggtgggagt ggttataggc tcagtgccac aggttttgcc
      301 ctttgtggct tctcacatcc cagacttgga aaatatgagc tgtgatactg agaaaggtaa
      361 gaagccagca cagccccata gtgataaatg agtttgcatc atctgtcatt agaacttcct
      421 gccaacaggg tcattcccta ttaaattacc acttgtcaat gtttaaaata ctgattgata
      481 aatgactgtg ccaaaactga taacacgaca gcttttattt tctaatattc ttggttacca
      541 cattctgcta cttcaagata cagatatagt atttcgtgaa agacaattta atctaataca
      601 aaactaacag gtactgtata acgattggtc ctgatataca ttacatacta ttcttcttgc
      661 caaaataaac ctactggtga tttagcgata tgggtagatc caagtttcac atttcatcaa
      721 atgctagtaa tctgtt
//
LOCUS       KCPA01002841             812 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 312306tic ultra-conserved element locus
            uce-277, sequence.
ACCESSION   KCPA01002841
VERSION     KCPA01002841.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 812)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 812)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..812
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="312306tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>812
                     /note="ultra-conserved element locus uce-277"
BASE COUNT          227 a          164 c          157 g          264 t
ORIGIN      
        1 cccttatcac tgacattcaa aaatacactt ggtaattacc ttctgcatga acttcaggaa
       61 agttgagttc cacaatctct ttttctttga ttaaaatgaa tgtttgttat cagcattact
      121 atttactacc ccatgatcaa aaacaaataa cccactttgt ttgtttctta ctgcaaatga
      181 attaaattag acgccattag gagcactagc tgtttatatc cttgtttcag cagtggtagt
      241 atttgaagtt tcctgcggta agttcattac tcgtattttg tccagaatta gtgaagcgtg
      301 ctgaaaattg ctaatgacag atgtttctcc actctgtcac acttcttgta tcatttgatt
      361 tggaaagcaa catacggtgt tctgctctat cagtatgtca cagactgtct gtaaacagct
      421 ggtcataact cagttcagtg aaaaccatta ctttccaatg aagtgctgga caccctccaa
      481 attgcatttt ggcatggcct gagctgcata atgcacaaag ttcttctgtt ctgaggttac
      541 ctaaggaagg acccccttcc acttgtttat tgtgtttcag gcaaatggtt agataagggc
      601 tgaaaagaac aggaaataaa aactttcttc tctcaggagc ccataaaagc tgtgactggt
      661 gctgtgctaa cagacctcac catttctgtt tgtgcctcag gttgaatggg gggtattatc
      721 agggtcaggg cacacaagat gatgacagat tgaaatgtct cctatcaaat agttgtggca
      781 ttctaacatt gctatgacta tggggctatt cc
//
LOCUS       KCPA01002842             628 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 312416tic ultra-conserved element locus
            uce-4443, sequence.
ACCESSION   KCPA01002842
VERSION     KCPA01002842.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 628)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 628)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="312416tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>628
                     /note="ultra-conserved element locus uce-4443"
BASE COUNT          193 a           98 c          134 g          203 t
ORIGIN      
        1 tttgacacat ggggcaaatg tgtgcttaat ttctcccaaa cagaagaatt aatatcataa
       61 taattaacac agatgagaac agaattaaaa tcaagtacgg tcaggagttc agtttaatgc
      121 caggtgtctc acattctaga tggttgaagg tagcaaggat tttgtctttg gcacttatgg
      181 gagctaaagt gagccttgga tgtcaagaga caggattttc tatttaatgc atgaaaccag
      241 aagcaacagg ctcatttagt atcagtaaag gtcagttaaa attatagaga catcctttgg
      301 agcaaatcct ctgccttgta tttgcatatt tatgaattag agattacgac aggctatttc
      361 atttattaga gcagcactgc tatggttaat agtctgtcag tatttccatt ataaactgcg
      421 tttttcagtg tttaatatct cagccattta aaatcacatc aggaggcaag ttggtcttat
      481 gttgctggcc aggcgcaatt ttttgttatg gattattttc aataatgaaa tactgctcat
      541 catatatgca gatggaccac ggcatttctt cgtagcaagg tgtgtagatc cattgtggcg
      601 tttttcttta ggaaagaagg gaaaagag
//
LOCUS       KCPA01002843             585 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 312525tic ultra-conserved element locus
            uce-7082, sequence.
ACCESSION   KCPA01002843
VERSION     KCPA01002843.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 585)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 585)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="312525tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>585
                     /note="ultra-conserved element locus uce-7082"
BASE COUNT          138 a          122 c          151 g          174 t
ORIGIN      
        1 ccatcctgtt tagtttgaag tgccattttt tgaaaggcag agttttctgt aagaaaagga
       61 aggtcactga tgttgctgag tgcaccattt cccctgaatt tcatgcggct gaaattgaat
      121 tcgtagtgtg gttttgccca agaagcctcc ctggataata ttaagtgctg tccatgattc
      181 tgtagtccag atggcccatg gctggcagcc gtagaaaact ggtttctgct cagcagttct
      241 tcactaatct ggagtgatcg agccagcggt actttaagag atgtggagtg gccataacct
      301 tccctggttc catcctgcaa gcttcttgga ggtaccccat caccactctg tagtccctcc
      361 ggatggtgct ggctgggtct cccaggtcgc ctaattggat ggaaggaaac tgatgtgagc
      421 aggacttgca caggtaggga gggatgggtg agggggccac tcctttatta gaaggccttg
      481 cttgggtaac atcacttttt gtgttattta tttttctcta aaaagtctca gcatcagtca
      541 gttttaaaac ttgttcgcaa aaaaagagaa gctttttggg caaag
//
LOCUS       KCPA01002844             379 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 312628tic ultra-conserved element locus
            uce-4045, sequence.
ACCESSION   KCPA01002844
VERSION     KCPA01002844.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 379)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 379)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..379
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="312628tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>379
                     /note="ultra-conserved element locus uce-4045"
BASE COUNT          129 a           78 c           69 g          103 t
ORIGIN      
        1 tcatgtccac aaagggttaa gaggtcaaaa ggtttcaaag tttgttggtc aagcaacaag
       61 gtccatataa caagcacagc tcaacagcac aaagcaagta cagattccag gtgtcttcag
      121 tttcttcttg gaaccttggg gggtttggaa tcgccaagtc ccctgtagag aaagatgttc
      181 ccttggcttg cttccgactc cctactgcaa ctcaaccacc ttgagtttaa tgttatatca
      241 tttatctaaa ttgcaaaaga cgaacaagca ataatgagta cacaaccaca aaaaagttct
      301 aaactttaat catgctgggg aattaaaatg agtattcaga ttgtattaca ctaacacatg
      361 ataagaaaac atttcctat
//
LOCUS       KCPA01002845             601 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 312729tic ultra-conserved element locus
            uce-2266, sequence.
ACCESSION   KCPA01002845
VERSION     KCPA01002845.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 601)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 601)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="312729tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>601
                     /note="ultra-conserved element locus uce-2266"
BASE COUNT          151 a           99 c          137 g          214 t
ORIGIN      
        1 acaattctgc tgtcttcttt ctgagaatgt tactatatta gtgctaagtg tatttgccag
       61 gatagcttca gtaatctctc cagcagaagc atatttgtgt gccattttgg gaatttctct
      121 gagataggaa tcttgcagat agaattaatt tctaggggaa acttcatagc ctgtgcatga
      181 gtgctttctt tatcacctgt ctccatttgg cattcggaga aggtaaatca aagtgcgcga
      241 tttgttattc tgctccactt gagagctgaa ctaaataaca cttggtctga aattctgatt
      301 gaagttgtag gaggatatac tgtatttaat ttaatgccct ttaatagcat cttcttgttc
      361 agctctgatg ctgtcatttt aaaggttgga tcggagtagt ttttcccata gggagtggga
      421 ggtgtaatca tttcaggggg tagtctagat tcctagaaca ctaatggcca caaacttggc
      481 ctagtgtccg agaagttgct ttttgccctt cgggttcatt ttgttctgta cagtgctctg
      541 gatagtttag gtaagtattg catgtagaag ttgatgacat tttctgtagc aaataatggt
      601 a
//
LOCUS       KCPA01002846             515 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 312833tic ultra-conserved element locus
            uce-7221, sequence.
ACCESSION   KCPA01002846
VERSION     KCPA01002846.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 515)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 515)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="312833tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>515
                     /note="ultra-conserved element locus uce-7221"
BASE COUNT          176 a           82 c           94 g          163 t
ORIGIN      
        1 aagaatagaa ccaaattaag ttgttctgaa aattaaccaa taattttcaa cagatcaagt
       61 tcttctgtga tatacattta agaattaaac ttaaattagc tctttaaagt ggccatgtga
      121 tttaattatt caaaatgtac acaaatttaa tgagttttta aatattaaaa ctattctcta
      181 ttgtcaccac tgtgagctct taatttacag agcaattaag tcaggaccct catttatcag
      241 tacatgtgcg tttgttgaaa acatagtcag tttttattaa ttgatgctat agaaatactg
      301 aggtaaaatt aatgtgtgtg cttcagaggt catgctggcg atagtaggta gctagcaagg
      361 agcaagacgt gagagaaata agtaactgct gttccctgat tacactagag atagctgaaa
      421 tattaagtgg cacaatgggc actatgctta gccaaaatgc ttgcaaacaa atgccccctg
      481 agttttctct ggcaagcatc tgtcatggca gtaac
//
LOCUS       KCPA01002847             523 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 312943tic ultra-conserved element locus
            uce-4484, sequence.
ACCESSION   KCPA01002847
VERSION     KCPA01002847.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 523)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 523)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="312943tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>523
                     /note="ultra-conserved element locus uce-4484"
BASE COUNT          146 a          109 c           99 g          169 t
ORIGIN      
        1 aacatatcta caacaggatc acatcgatgt gtgcagctgt gagagatgct aatgcacagt
       61 tgcatgtaca gaacttttgg gttagcctcc ttttcttcct tgtaagtaaa agcagcttgt
      121 tctcccatta caaccacttt ttcttttctt tgcaggctct gtttgtagtt atacagttag
      181 gtctccacag agtaatttac tggctgaatc tctcccagaa tccagcttga aaccaagctg
      241 taaaaacagc tgagagtgta aataattcat gcagacaata tgactttttt atgtaaattc
      301 ggtgcattaa ccctctatta taatgatgga cgacagatat gggcgacgtt gccttggtaa
      361 gagctaatgg atggccgcca taaattctct gcacatttta ttgtgttgct ggaaattgtg
      421 ccttcaggca atgctgttta cttttatgta aaactcaggg ttccctaaat attacaaata
      481 ttttacatcc gactcctcag catttgggca cagcacacaa atc
//
LOCUS       KCPA01002848             371 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 313038tic ultra-conserved element locus
            uce-3199, sequence.
ACCESSION   KCPA01002848
VERSION     KCPA01002848.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 371)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 371)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="313038tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>371
                     /note="ultra-conserved element locus uce-3199"
BASE COUNT          133 a           62 c           86 g           90 t
ORIGIN      
        1 ttcatcccac taggaagttg cagagcacac agaggatcac agaaaaacaa ttcacagagc
       61 ttcggggaat ttatggtgac tcaaattata tcaccccaac agggtttaga ggaaaggata
      121 tacaatatga agaacaacta aacaatgcac aagttgtgtt gtaatcacag aacaacatga
      181 gcagctgagc agaaggaaga tgggcagtgg aatgccatac agtaatcagc actgttgact
      241 aatcagaatt tgagacacta gaaggtaata agggtattat aaagaatggc ttattgaagg
      301 agcagctgtt tatgtgtagc tcactgttta aatgaattcc actagattgc catggtatga
      361 gtttcactcg g
//
LOCUS       KCPA01002849             528 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 313147tic ultra-conserved element locus
            uce-6034, sequence.
ACCESSION   KCPA01002849
VERSION     KCPA01002849.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 528)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 528)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="313147tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>528
                     /note="ultra-conserved element locus uce-6034"
BASE COUNT          167 a           94 c          107 g          160 t
ORIGIN      
        1 tatattaaaa gccattaaaa cagctgtttt gctgtaggga atattacttg tgggctgaat
       61 gcagagatat gtgtaggtat ttattcagta atcaatcaca gagaggaaag acctcgaatt
      121 tcagttggaa gtttttattt ttatcctttt ccttactact ggtctttaaa cctgctctga
      181 ggaaagctat acatgcccgg ctggtgctca tcaaaagcaa gcaatcacag ctaaatcagc
      241 atgcaaaatg ccactcaacc ttgggccttt attaaaattt gctgggactc aatttgagat
      301 agcgatcgtt cttattaaaa agcaaaatgt aagatagttt ttttatataa atctctggat
      361 ggaatggaat tgttaatcag cataggctga tgtgatttct ctgttgcaaa tcctgccgag
      421 ggctcagaag tggcacatta ccataattcc taggctagag ctggcagctt gaaaaagacc
      481 tgcaagaatc tttaaaatgc ttaagcaaag ctgtaagtca cagcaaac
//
LOCUS       KCPA01002850             633 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 313258tic ultra-conserved element locus
            uce-5596, sequence.
ACCESSION   KCPA01002850
VERSION     KCPA01002850.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 633)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 633)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="313258tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>633
                     /note="ultra-conserved element locus uce-5596"
BASE COUNT          179 a          164 c          132 g          158 t
ORIGIN      
        1 catcatctgc ctccccacac cagtgtgctc tgttgccagg tgccagagac accctgaact
       61 cgggaccctg ttgggtcaat gccacccaca tgcccatgcc accagtgctg tccttgctgt
      121 cccaaatgat gccatccctg gcagcgagtg tgccaagctc gtcatacgtc atttagtgag
      181 actcattcca aatcagcact aaggtaaaca cgcttattat aattatccat gtaatcaaca
      241 acagcagaac aactttctaa tatgcaatta cagccatcta ttgattttac aatgtaatcc
      301 gctccgattg atttaataac acaattatag gctggctctc gggatattag agtgggagat
      361 tttcataaac tccaaagcaa aaaactaagc ggcttttaaa acaacacagt cagatggctg
      421 tttggggaat tattaacaat atgaaatcct ctaaatctgg ccgtcgttac cttgtgaaag
      481 gaatttctat tacaaaaatg gcaattgaca gcctaagaga gcgcgaccgg gattgctctg
      541 ctgcctttca gtgcttaatc catcgcaaag gtgaccacgg gggacatccg agtccgaggc
      601 tggcaagagg gcactggcag ccctgcccac cct
//
LOCUS       KCPA01002851             559 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 313368tic ultra-conserved element locus
            uce-3580, sequence.
ACCESSION   KCPA01002851
VERSION     KCPA01002851.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 559)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 559)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="313368tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>559
                     /note="ultra-conserved element locus uce-3580"
BASE COUNT          154 a          129 c          141 g          135 t
ORIGIN      
        1 ggttggtcag gatggctact tcagcacccc ttctgtttga ctctgaggat aacacaggaa
       61 gaggttcatt accatgtgct gaagataaag gtttcagtga cgcagcattg ctgacaaatc
      121 cattgctacc caaacacaca gacaccgaaa ttaaaaatgg gaatgtgcat gttgccggct
      181 ccactggcac ccattaaacc taataactaa ccatcctcat gagtttctag ctctgaatta
      241 tcaaatctgc aaagaaaaca acatccgtcc acttttacac tccagtggaa gaggtggtcc
      301 ctcgcggcag ggctgtgcag tctcgccatc tggagaataa atcgagtgtg aagtacagta
      361 tagtttggga ccaagctccg tggcggcagc ccagcagtta gttcattagt cccaaacttg
      421 tggggattag tgcagtatca gctctactgt cggatgggat caggcaggca gagcgcgaga
      481 cctggggggt ggcggcaaag aagggcttat tgataaaacc acacgtatta gtgcacctga
      541 atacgtactt ttggctttg
//
LOCUS       KCPA01002852             756 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 313479tic ultra-conserved element locus
            uce-4416, sequence.
ACCESSION   KCPA01002852
VERSION     KCPA01002852.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 756)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 756)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..756
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="313479tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>756
                     /note="ultra-conserved element locus uce-4416"
BASE COUNT          244 a          155 c          145 g          212 t
ORIGIN      
        1 gtatgcaaaa taaagcccta tgatctgtct gaaatagata atttttcctc agagtgcaag
       61 tagaaagaaa aatcccatac taaaactcag aaattctgat tctttacttt gtttctgcct
      121 cggatacatc agtcttacct gaaaagatct actgcaggcg cctcttgcca tgccagtatg
      181 ggtgtgcagc agacaaaaga cataccagaa aggggaagac agatatgcca cttaaattaa
      241 ataggaaatg aattggccag caagttggca tgtctgctga gacaaatcat agacaacatg
      301 tctctcaaca acagaactta tttgttttct cttgccaaca gattcatcac tgcccaggca
      361 aaacaggcaa aatacattag tgtcatggta aactgataaa gagaagtgcc tcaatctagc
      421 atcctcaatg gcgaaagtct tagggctgta ttgatctgtg ttatataaat cttgttttct
      481 gtctgcagaa gtgaatcagg aatgaccctt aaggttaaca aacattgtaa tgtctttcag
      541 ctggggcaga tgcctatgtg ctccacacat tgtatttggt caagtcccat cttgtcattt
      601 tactgccaag aagcttaact aattgctggc aatcataaga cagtttgatg gaaggaaaga
      661 attcctacaa ttgttgccac tctttttttt cctcagcctt aacaagcact caaagccatg
      721 tagcggaaaa caatcaacac tgaattagtc agcagg
//
LOCUS       KCPA01002853             559 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 313591tic ultra-conserved element locus
            uce-6441, sequence.
ACCESSION   KCPA01002853
VERSION     KCPA01002853.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 559)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 559)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="313591tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>559
                     /note="ultra-conserved element locus uce-6441"
BASE COUNT          139 a           99 c          110 g          211 t
ORIGIN      
        1 cagagtacat gtaatattac acaaggaaat aaagttaatt ttcctgaagt agggtatata
       61 aatggacttc aatgaaaagt ctttttccta agccacattt gctaaatgca gacttttgca
      121 aggtcagcag ttatactgga gttgaggaga aatggcttca gtggctttaa ctttaccagt
      181 gcccttgatg aggtgcagag ttgtcagtat tctcgtaaaa ttcctcggtg atggcttctt
      241 ctgttctctt tatttcctta agtgaacatc tgtctaattg ttcacctcca ttgctttagt
      301 gctttcctca tgctttctct gtttccagac aataaacttt attttcttca taagaattca
      361 gtctacgcaa gggtattagg cagcttgttt gcacctttta atttctggaa gttttccaga
      421 agggcttttt gctgtagttc caatgggttc atcagtgaat catgtaacat aatgcagcat
      481 tgtgtttggg tttttatccg ttaccttctg tttataaaca tctgcttgga aattttcttt
      541 ttgcatgtgg catatgggt
//
LOCUS       KCPA01002854             510 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 313702tic ultra-conserved element locus
            uce-510, sequence.
ACCESSION   KCPA01002854
VERSION     KCPA01002854.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 510)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 510)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="313702tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>510
                     /note="ultra-conserved element locus uce-510"
BASE COUNT          146 a           81 c          109 g          174 t
ORIGIN      
        1 agagagtcct ttccatttat ttatgatttt tttgcatgat tttatttgtt taagtttcct
       61 gccttacctt tgcatttgca tttcctattg attggcaatt tttaaactgt ttattgtggt
      121 cttttgttta gctgttcaag agctaaaaca aaagccacca ggccctgtga gggacacatt
      181 tgcatgcggc gagcgttgcc cgaggaaaaa gtaattgcta atgcatattt atgtggcaca
      241 aatttgccat ttgtttatgc ataaaattat caatagtgca gggcggccca gccgtagaaa
      301 atggtgacct ttttagctta ataaagagaa atcagctgtt attgtgaaga gatcagccat
      361 ttattctgtg ttgagggaca ctgtcgggaa aatgtagatt ggtgccggca atatcattaa
      421 atggaaggcc agtgaccctt tcggtatagt ctattatact ttatctaata ggggataaat
      481 gactctggtt agcaaataga ttaaaaaaaa
//
LOCUS       KCPA01002855             536 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 313814tic ultra-conserved element locus
            uce-4646, sequence.
ACCESSION   KCPA01002855
VERSION     KCPA01002855.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 536)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 536)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="313814tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>536
                     /note="ultra-conserved element locus uce-4646"
BASE COUNT          167 a           96 c          101 g          172 t
ORIGIN      
        1 ttaaatgaat ttgaagattc aggctgcttg tccactggat ttagactaaa caatacaacc
       61 agaaatatac ttactcattg ttaaacgtct ctattgctat atattgaaga ttgagctatg
      121 tattttggag tgactgggac catgacaggg aaacttcaaa tgaaacttgg tggacttgta
      181 gatttggaaa taagtccaga aggctgagct taatataaca tgtggcaggt ggcctgcatt
      241 tgcctggaga attcctctag ggcaagacag ctcagcaaac acataaatcc ttttttctct
      301 gttatctagt agcacactta gttgccatgg gaattgtatt tatgcagcag atcctctgca
      361 gttcagtttg tgcctaaagt ttaactgtac agctgttacc gtaaatacta catggcaata
      421 ttttcaaaac acagcacctt tgaacaaatc tattattgaa aaataccatt ttgattacac
      481 taggatcatg ttttaagctt cataagttga tttaaagtgt acttcctgaa cagctc
//
LOCUS       KCPA01002856             323 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 313914tic ultra-conserved element locus
            uce-2194, sequence.
ACCESSION   KCPA01002856
VERSION     KCPA01002856.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 323)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 323)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="313914tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>323
                     /note="ultra-conserved element locus uce-2194"
BASE COUNT          102 a           51 c           55 g          115 t
ORIGIN      
        1 tcatagagca agtgtatctt cttgcactca tcaccactgt tgtttagtaa caatgttact
       61 ttgaaagaaa gaattcccta aacttcttcc tattaaagta taatgttaat tggttagcgt
      121 atatagaaga aggttatatg gcccattgac tttatataga ttgaaatgct aagcagggct
      181 aaatagaagc atcagtaggg aatagagggt aagtgctcat cagttttatg ttctctttcc
      241 tatttactgc ttacccctta cagtgtttta caacaagata cacaaagttt tcttgggtgc
      301 ttcataaata aaaatttatt ttt
//
LOCUS       KCPA01002857             557 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 314024tic ultra-conserved element locus
            uce-101, sequence.
ACCESSION   KCPA01002857
VERSION     KCPA01002857.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 557)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 557)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..557
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="314024tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>557
                     /note="ultra-conserved element locus uce-101"
BASE COUNT          173 a           94 c          133 g          157 t
ORIGIN      
        1 gagagatatt aaagggagac acggcctcac tgttttcagt gctgctcagg cttgggcttt
       61 atttccacct taaaatcttt acctggccgt gatctgttgt tccattactg gagggcaaaa
      121 atgggaggaa ttgtctgggc taaattgcaa ttaggcagcc ctgagagagg ctggcaccag
      181 ttaacttggg atattggagt gaaaaggccc gtaatcagcc ttcggtcatg tagaacaatg
      241 cataaaatta aattgacatt aatgaataat tgtgtaatga aaatggaaga ggagagttaa
      301 ttgcatgtta cagtgagtgt aatgcctaga taaccttgca tttaatgcta ttcttagccc
      361 tgctgccaag acttctacag agcctctctc tgcaggaagt cattaaagct gtgagtagat
      421 aatgcaggct cagtgaaacc taagtggcaa caatataaca agagtttctt tcagacctta
      481 gtgttttcag aaaaaaaagg gcgtgttgag gtaatttgta cacatcggaa tgaaaacaag
      541 agaaatctat ttgtagt
//
LOCUS       KCPA01002858             395 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 314126tic ultra-conserved element locus
            uce-383, sequence.
ACCESSION   KCPA01002858
VERSION     KCPA01002858.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 395)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 395)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="314126tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>395
                     /note="ultra-conserved element locus uce-383"
BASE COUNT          125 a           73 c           81 g          116 t
ORIGIN      
        1 caacatgccc ttgtagacat tccagtgggg ctataaaatg atcgatttac tttaattttc
       61 tactgaatcc tgaaaaaatg gctatcagta acctatccct tcatcatggc atgctgattc
      121 actctgtgta ttaaatttac tggcaaggag caagacgtta acaaaaagta acagataatg
      181 tgaacatttc atgcataatc tgtaatatga gatatgtatt aatagggaaa ttatgatgca
      241 ttcaattatt ctgaaatgcc ttccagagat gttttgattt ggctgcgctc tgatagtagc
      301 agcacagcag ggagcatctc aagtgatgaa taacctaatc tcctaatctc aaaatgggca
      361 ctattcacag ctagcccggg agaggctggt gggag
//
LOCUS       KCPA01002859             863 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 314239tic ultra-conserved element locus
            uce-492, sequence.
ACCESSION   KCPA01002859
VERSION     KCPA01002859.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 863)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 863)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..863
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="314239tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>863
                     /note="ultra-conserved element locus uce-492"
BASE COUNT          265 a          197 c          170 g          231 t
ORIGIN      
        1 gcctgtgact tctgaaccaa agatgtcgtc tcggatatgc cacagatgat gctctcctat
       61 tgacagtctc gctgatgtgc aaaggacaga tgcgtctcaa cttgccaagt taaagccaat
      121 aaatccatag ctttatatca ggccagctga tatacggccc cctgcctttt gtcatcacag
      181 gcattcactt cccctggccc ccagaaagag gggtgcatta atcaaacatc aacaaagaac
      241 acttatcaaa cactggccgt gaggacgtcc aggcctccaa caagatgaca gctaaagtgt
      301 gcactggggc tgtaattact atgcagaaag ttgtttcaat gctagcaaag ataataaatg
      361 aatgaaaatt tatggcaggg aatctaagta gcaaggaaac agaagcaggg agactggtgt
      421 ttctcccaaa aggccaactt gcatcataat tgccatgcag ttgcaagggt ccttacagat
      481 aattgaccag aaaatgatta agtcatcatc aaatcgcttc tgcttgcaag agttcaaaca
      541 tgtacttaac ctatccaaga attatatttt cactctgtgt gtctgctctg tctctattca
      601 gccttgcggg gaacctgatt aaaaagacaa ctgaaggacc cccgttatct gatcttctgg
      661 ttgccgattt caatagaact taaacccatt acgatttgct gaacttggag ttctttccat
      721 tttatctcag cagtaaaata cactgtccaa atttccagac actgagataa ggactacagg
      781 cccccgtgac ggcttactgt tcctttttaa ttcttttaga ataagaaaca aaacattaca
      841 aaatgatagc aggctgtgca ctg
//
LOCUS       KCPA01002860             610 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 314350tic ultra-conserved element locus
            uce-7054, sequence.
ACCESSION   KCPA01002860
VERSION     KCPA01002860.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 610)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 610)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..610
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="314350tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>610
                     /note="ultra-conserved element locus uce-7054"
BASE COUNT          159 a           98 c          137 g          216 t
ORIGIN      
        1 aggttggttt ccaaaattgc agctgtgctt ttctcttccg atttacaaaa ggttttgcag
       61 agagttgaga atcggatagg tttgccacat cgatctgagg gctgtttgcc taggcatagg
      121 gtttcagtgt atggctggca gtaaggcaat aggcagcaat ttttttgtgc tcagctgcta
      181 catatgacag aggatatttc attcggctgt cagaatgtta ttaataaaac atggggtgcg
      241 aagagggcca ctatttcccc tttcaatcac tatagcattt acaatgaaaa ttttatgcag
      301 tgtgtaattt tcagttaatg cttgacactt aaaatgtcgg tagctgcatt ttgtatggtt
      361 cctgaagggt taattgtatc atgttccctg cataaaagct ctgcttatca aaagtgaata
      421 gaagagtgta tgcaaatgtg tgtctgtgac cttttgcctt tccagggtta atttatatgg
      481 tcattaaaga ttttatgaaa tcgagcggcc tggtgcttcg aatcccattt taccttcacc
      541 taatttatat aattcctacc tgaacaggga aatatgattt ttatttgtgt gtgtgtgtgt
      601 tgtaatgtta
//
LOCUS       KCPA01002861             537 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 314454tic ultra-conserved element locus
            uce-7420, sequence.
ACCESSION   KCPA01002861
VERSION     KCPA01002861.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 537)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 537)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="314454tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>537
                     /note="ultra-conserved element locus uce-7420"
BASE COUNT          174 a           90 c           91 g          182 t
ORIGIN      
        1 aaaagaaagg gaatgctaaa aggggacaag gattcaaatt tggcttcagc ccttcttttt
       61 tcctctttgt tttctgcaac actgttttga ttttagagaa aaattctaaa ttgacattta
      121 aatggtggca gggcaattct cattctctgc cttgtgaaat ggtctctgaa atgtacaatt
      181 atgctgtcat ctttagcact ccacgttgga cagagtttaa ttattaatgt gtttccctca
      241 gagaatgact cgatcatgtc acaactctag acaaatacag ctaatgcaaa atcataaaat
      301 attcacttga atactgctga actgacagga aattaattct atgaacactt ttgatattac
      361 cagaaaatta gtttcaaacg cataagactg aaataaatgt gttcataatt tgctcaaggg
      421 taacgctcat cttgcaatca gttggtgtct ttttataaat gttacaagta ctcaacatgg
      481 ctttatgata aagaggacag ttaatgcaat gtattatttg tagactatat ttccctt
//
LOCUS       KCPA01002862             547 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 314562tic ultra-conserved element locus
            uce-2253, sequence.
ACCESSION   KCPA01002862
VERSION     KCPA01002862.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 547)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 547)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="314562tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>547
                     /note="ultra-conserved element locus uce-2253"
BASE COUNT          170 a          114 c           86 g          177 t
ORIGIN      
        1 acacaaacta ttttgaagtg caaaagatca gaagcgtttt gacaaagaaa accaaaattt
       61 tcatgacact tacagttcaa ttttgtacta tcagcacaaa ataaaagtac atatgtgaga
      121 gggaagtcat aaatttcatg ccttccatct aaagaagcag ctaattctta cccctgtttc
      181 ataaaggttt atatgtcaaa atgatcagaa gtgtggttaa catatgttat attaatccac
      241 tgtacctaca ttttgctatt tctcaaagga ttgggtcatt atatatgcag agaagggaaa
      301 tggctttatg acctctgctt tctccattgc gtgttctcct ttcagccccc agctatcaat
      361 caagtttcca ttttgtttca tggcagcaga catcccaaac actcttatta gtactttgac
      421 ccttaacccc acactaaacc taagcagaag tgcaagtagt aacctattat atattgttta
      481 cagctgcatt cccatttggg tttgtctgta actgtatttc tgtcagacag ttcatacact
      541 cccagtg
//
LOCUS       KCPA01002863             354 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 314667tic ultra-conserved element locus
            uce-2263, sequence.
ACCESSION   KCPA01002863
VERSION     KCPA01002863.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 354)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 354)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="314667tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>354
                     /note="ultra-conserved element locus uce-2263"
BASE COUNT          115 a           75 c           54 g          110 t
ORIGIN      
        1 tgtaaatatt tataagtgtc tcatattaaa gtagttgtca actgcagcta cagtacttca
       61 ccttctgtca ctcccaggta tcaagggggc tgattcaatc actctcttgt cagaatacct
      121 ttcttctcct gaatacccaa atccctaaac acaacaaaat ataaatgaat gaaaagtgct
      181 aatgatgcat cattaccaag aggtatcaag ttttttaggg tcctttgctg actaaatttt
      241 aaattagcac aattattcag agcattcccc aaggcaccat tcattatgct tagccactga
      301 gtagaggcaa actgcaaacg aaatatatat tactgtccat agcatattgt ctgt
//
LOCUS       KCPA01002864             543 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 314771tic ultra-conserved element locus
            uce-5230, sequence.
ACCESSION   KCPA01002864
VERSION     KCPA01002864.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 543)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 543)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="314771tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>543
                     /note="ultra-conserved element locus uce-5230"
BASE COUNT          114 a          131 c          151 g          147 t
ORIGIN      
        1 gaagagtaga ggtttcatcc tccatccctg ctgtcctgca tgcagtgctg ctgtgtcctc
       61 agtatccgtg ctgggagctg gtgtgagcag tcacatccgt catggaaact cctcaagtgt
      121 ttgtacaggt ctgcagtgat gcagaagggc ccaccgcctt gcgaggagca gcagggctgc
      181 gtgcagctgc ccgccgcgcc gtgcggctgg aaggggggcc gttacactgt aagagagtga
      241 gtagcaggtc tcacagtgaa ccggtctctt ttcctgctgt gtcatgccac cccggatgac
      301 tccagagtct ggtgtgtgag caggaattgt ggtcgcattt caagggaata aacaattctg
      361 gtgtttgaga ttatttgttt cctgtctgtt tctttagtgc acaccttccc tcgtagggtg
      421 tctcagtaac tgcatttgtt tttccagagt gccaggtaga actacatcgt tcaatctcag
      481 tttggcagaa accctttaga atggcaaagc agattccctg caaaagcctt gatatgaaag
      541 tca
//
LOCUS       KCPA01002865             525 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 314880tic ultra-conserved element locus
            uce-6865, sequence.
ACCESSION   KCPA01002865
VERSION     KCPA01002865.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 525)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 525)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="314880tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>525
                     /note="ultra-conserved element locus uce-6865"
BASE COUNT          141 a           92 c          122 g          170 t
ORIGIN      
        1 ttgtcaggca cgatgtaatt tctgaaaggt tcaaaagcag ttgtgacttt tgcctgtacc
       61 caagatgcaa ttccttaaca aggtgcctct gagaatttta gcttttaaaa gaggtgggga
      121 atgcacaaat tatgctttaa ttacttgcct tgttttttta gacaggtgcc ctagttcaca
      181 gttatcgggg aacaggaggg atttttgagg tttgctggaa tgcagcagga gacaaagttg
      241 gagcaagtgc ttcagatggt tcagtaagtg ttgcttgact tggttggtca gtaacaaaca
      301 ttttaaccaa caatggaggc aaaatttcct tctctagctg aaggttgaat agctcacctg
      361 taaccatact gtggtaagga gaataaaaaa actcagaatg tgtctccaat ttatattttc
      421 cattccttct ggggcctcct gtgtcagcgt gttcagtgtg gctggtttgg aaacaaactt
      481 ttctttttct ctgcccaaag tgctcagtgt atattataat gcatg
//
LOCUS       KCPA01002866             543 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 314989tic ultra-conserved element locus
            uce-2326, sequence.
ACCESSION   KCPA01002866
VERSION     KCPA01002866.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 543)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 543)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="314989tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>543
                     /note="ultra-conserved element locus uce-2326"
BASE COUNT          173 a           93 c          109 g          168 t
ORIGIN      
        1 tatatcaact tcttcaatca catgccacaa acaaatgtca tataaagtta gtgaaaggaa
       61 aaccctgagt tagcagaatt ttaaataata aaaagctata gtagcgtgta tgcccgtggg
      121 aaaggacacc ctcacacaag acagattagg gtacttgtaa tgctaatttg cacatgggat
      181 ggacttcaca cacacacaaa aattaatgtg gccccagtgt cccagagaat acatcgaagg
      241 tgctgtgagc cggctgctcc acttgcagtt tttatcactt ctgaattgca ttttaatagt
      301 acatttttct tttgttcaga cgtgaaagaa aattggcttt ctcaggggat tggatagatg
      361 agaagacaag gcttttggga tttgcccgta tatgtgcaga atttagttga gccacagcat
      421 tcataattta atatgaatac catgtctgta aaatttatac acaaaatgga ggaaagtagt
      481 gttttcctta aaattctacg tagaggtttg attttaccgt ggatcagtta atctttgtct
      541 ttt
//
LOCUS       KCPA01002867             421 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 315091tic ultra-conserved element locus
            uce-4905, sequence.
ACCESSION   KCPA01002867
VERSION     KCPA01002867.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 421)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 421)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="315091tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>421
                     /note="ultra-conserved element locus uce-4905"
BASE COUNT          146 a           79 c           60 g          136 t
ORIGIN      
        1 agttgaacaa tttccatgcc cacacacaga aatgcatacc aagaaacaag ttcacattta
       61 agtgtcactt cccacagaaa aaatgtccca ttagtaaaca tggaccttaa aaactgattt
      121 ctttcaatag agctgtacac ctcatcttgt gtacaaatta cacatcactg gttaaaaaga
      181 agatgcacat aatatatgga attaactgtt tcaacccttt ccttgctgct ataattttta
      241 tatctcattt tacctctgta attaagacag gtctggtagg tatttaaatt agcctggctt
      301 tcatctctat cacacattca tttcaaaact tttatgaata tttaatagag gttttataat
      361 tcatggtgat gtgatgaaca gccttttggc cgttaagtca attgacagaa aggaaaaaaa
      421 a
//
LOCUS       KCPA01002868             473 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 315203tic ultra-conserved element locus
            uce-6809, sequence.
ACCESSION   KCPA01002868
VERSION     KCPA01002868.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 473)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 473)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="315203tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>473
                     /note="ultra-conserved element locus uce-6809"
BASE COUNT          159 a           94 c           82 g          138 t
ORIGIN      
        1 ttccacttga gagaaagctg acgcaccctt agtgaacaga atggcaattt tcataaaata
       61 cacagtcaaa ctggtaaagg ctaaattctc cagtttttac ctcaatttga aataaaataa
      121 tgtgaaatac agtcattgtg ggtttcgaca cattttacag gtactaacac caataagtaa
      181 tgtatatgaa gctggcaatt ctgaaccgct tgtctttcac aggatttctt atggctattt
      241 acattttcag tcagtgaaaa tcaattacct tcccgcaata agcctcattt gctacctttg
      301 agcataatag aaacaccatt aggacgatga cattacccaa aagaagggca ccacacagtt
      361 ggtagacata aattaaggac cctttcacat atgcattaga aataccgctg tgactgaaat
      421 atgcataaaa tccgtatcta ttagagctat tagcgcgtgc cggtgatgat ttt
//
LOCUS       KCPA01002869             843 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 315313tic ultra-conserved element locus
            uce-1667, sequence.
ACCESSION   KCPA01002869
VERSION     KCPA01002869.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 843)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 843)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..843
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="315313tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>843
                     /note="ultra-conserved element locus uce-1667"
BASE COUNT          266 a          145 c          141 g          291 t
ORIGIN      
        1 aaataatgtc tggccactgg gaaaacatat atttatttac aataaaaact ggtgtattaa
       61 ttatttcatt cagtagacaa gtttcatcat aaagactggg cttatacaac atagcaggca
      121 tcacagtaaa aatcataaat actgtacttc tgtttagctt gacaatggca ggtaatagac
      181 tatcatttct gttcccttag ctactgtatc cttttctatc catcattctt tattgttatt
      241 atcacactta tttcagcact cttatatcag cagcatttag tgatattgcg aaaacatggt
      301 tcagaaaggc tgaactttta attgttatga gaaataagtt agcttaatta ttctatgtaa
      361 gtagaaaaga tgtggtttgt tcttcttcct aagtccttcc ttcctaatcg caattcaaca
      421 ccctttttaa gcattgctat gtatgaactt catgctgcta gacaaataaa ttctttggaa
      481 aaatgcacat ttttatttgg aaataatgcc atctctttgt tagatttgca gcaatcctat
      541 tttgcctcta ctgtttttaa gtcgaaaatg aaaaattatt tagaagatgt ttgtgcatca
      601 tattgtgctg aatggtatgt aggtcagcat gctgcaccat agcagataag gcacagtgaa
      661 caagtgttct atgtacttac aagcaaatat cagtcataat agaagtagac agatctacaa
      721 gagcgttttg gcttaggaaa tgtttcttgt cattagcatt taaaaaaagc tatgagattc
      781 aggcctatca gcaccgattc acagcaaagc ctggcttgca caggttgtta tctgttcagt
      841 aca
//
LOCUS       KCPA01002870             688 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 315424tic ultra-conserved element locus
            uce-802, sequence.
ACCESSION   KCPA01002870
VERSION     KCPA01002870.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 688)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 688)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..688
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="315424tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>688
                     /note="ultra-conserved element locus uce-802"
BASE COUNT          219 a          134 c          108 g          227 t
ORIGIN      
        1 taaagctttg gttttgattt ttcaaacttt tttctcaaac ccttgctcat ccataatctt
       61 taaaagctca gttgatgcca tgcagagtac aggcttattt ctttgctgaa ctaatctaga
      121 cactgtctag tgttgagtac agttgtctga ttcaaatctt ctgttacaaa gcagatgaca
      181 tctagctaga tgtcatgaga agagactaac aatgacaatt cacttatccc ttagaaagaa
      241 tcaattctcc cacaatgcat ctgtcagaga actctcactc agtaaaagca atttttctag
      301 ctgtctgaca ctgtaattgc tcttaaattt tcaatgaacg ttttacaaga actcccctga
      361 accatgatga aaaacttaac tttttctaaa aatgagaggc tgacaggatg aaagaggtct
      421 ttctctttaa agctttgctt gcttcagtag gaattctttc atatcatcaa caagctgttg
      481 aatagaggat agattacttt ccatttattt catcaatcag attaaaggct ctccttcaca
      541 atacccttta aacaagagct gtttatgatg tcctcccagg ttctacttta atgtagtatt
      601 aaatcaccct gagcagagag gaaggtaaag catataaata tgatgaatat ccgacaacat
      661 ttaagcattg catacattca ggtaattt
//
LOCUS       KCPA01002871             603 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 315534tic ultra-conserved element locus
            uce-5278, sequence.
ACCESSION   KCPA01002871
VERSION     KCPA01002871.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 603)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 603)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="315534tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>603
                     /note="ultra-conserved element locus uce-5278"
BASE COUNT          212 a          116 c           89 g          186 t
ORIGIN      
        1 tgcttttcca aatcataaaa actatgcttt aaataagatg catttcactg ttgctaaggt
       61 atgagcacga aaagacatgc catttttcac agctaaatat atgcaggtgt taatgaactt
      121 atttaaaaaa tggttctgag cactgaaaag ggtaaacaca taataactct gctgtttaca
      181 atggtaaaca attgcaagtc ataaccacaa tattgttcct agttatttca gctataactt
      241 gcaaggcttc atagccagac aaaccagatg aaatatgttg ctgcaggtct gctctgatgg
      301 atccctctga aatatccaca ttattgcttt tattttatta tgtaccacac ttcataactg
      361 tacacagcag actacaataa aaactgcact acactccttt aagtacttat taaataggtc
      421 aaaaagttac cataacaaat aacttgctct actcagggtc cattaataac acatcttgtt
      481 gggattctaa aacaaacaag aaatgtctgt tatttgatgc tgttgcctaa cagtttgcac
      541 ttaaaatgct tatttgtcac agcattacca gtctaaaaca tcagcattga cacaagatgg
      601 aaa
//
LOCUS       KCPA01002872             510 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 315644tic ultra-conserved element locus
            uce-6696, sequence.
ACCESSION   KCPA01002872
VERSION     KCPA01002872.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 510)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 510)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="315644tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>510
                     /note="ultra-conserved element locus uce-6696"
BASE COUNT          163 a           88 c           97 g          162 t
ORIGIN      
        1 agagccgaag catcgtttaa aatattgtac aaatgttgct tagcttaatt gattaagcta
       61 caaagatttt ctgcttttaa ataccatact tatacctttc aacaatcatt ttaatatata
      121 gtcaatggct ctttgtagcg ggaacaaaaa agaactatcc acagtttttc aatagacttt
      181 gagctgggga aagacaggtt aatcgagggt tgcatccaga aaacaaccaa gtgttgtatg
      241 tttgcactga atccaaatgt ctgcattttt ctaactaaat caaagggagt gttatttctt
      301 tttctgctca ctcatctgaa ggtaagtaaa ttttctctgg cgatcaaaag cctggtcagc
      361 aacaaagaca ccgcctgctt tttccaccgt cctggtgtgg caagttgagg aatttcaata
      421 actgtgacaa gggtgactga tttgtgaact agaaaaggtt tgaatgtcag aaaatttaca
      481 ttgctcctat cgaggattta aaataaagtt
//
LOCUS       KCPA01002873             817 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 315756tic ultra-conserved element locus
            uce-3394, sequence.
ACCESSION   KCPA01002873
VERSION     KCPA01002873.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 817)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 817)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..817
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="315756tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>817
                     /note="ultra-conserved element locus uce-3394"
BASE COUNT          251 a          146 c          162 g          258 t
ORIGIN      
        1 tgtctgccct aagggtctag caaatacaag agggaaaata taattaatat agaattttaa
       61 aaccaactgc agaatgtatt ttctttattt cctcatgata actggaaaga aaagcaaagg
      121 gtcgactgac actccttgtt taatgcagct tacttagtga ctggcataat gataagtgat
      181 ggtaatttac cttaaaaacc ttaatgagtg gatcattact atagagaaat gggaagaaaa
      241 ctttaatccc acagaggcag agctccatgg ttggctgtgc aataaccaga cagaactctg
      301 aatgagattc ccaagcttct gttccctaga taaaattttc tctcactcca cttttgcaaa
      361 ggtaatgagg aggtaatgag gcttgacttg aattttttca gcacttgatt cccttcattc
      421 cccagcaggt tcccatagga tagagtaaga tgttggattt atataaaagc tgtgctgata
      481 gataggtgga ggaggtgagc catgctattt ggttttggat tctgtctgta tgagaagggg
      541 ttcagataaa tttcaagttc tttcagcact gtcaattcac tctgatagtt tccacagaat
      601 aagacaattt gacgacatgc agaccttgtc agggttgttg actgtttatt ttgtcacttt
      661 actgatacta aacactgacc tttccgtgcc acctcttctt cctcccattt ttcactaact
      721 taatgacaca tctgagtaaa taataaaacc caaaaaggta ggcagaaatg ttgtattaga
      781 tcattagctt aatttgagct gaaaggtctt tgttgta
//
LOCUS       KCPA01002874             610 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 315863tic ultra-conserved element locus
            uce-7331, sequence.
ACCESSION   KCPA01002874
VERSION     KCPA01002874.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 610)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 610)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..610
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="315863tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>610
                     /note="ultra-conserved element locus uce-7331"
BASE COUNT          206 a          120 c           99 g          185 t
ORIGIN      
        1 atgtatttga tggaaaaaag aaatccattg cagttattat tatattgcat gacttaaata
       61 tattctttat catccgcaaa cgagacattt ttgtgcttaa cgtttacttt cagttctctg
      121 aattgggtta tcaaccaatc cagagaatat catgaattgt cccaagtctt tcacagtaaa
      181 cttaaaatct aaacaataaa aacagataaa tagaggaaat gtcaaactga attctgggta
      241 atgatcagat cagcatgctt ttatacaatt tccatcactt tgaattttaa atcaccttct
      301 aaagggcact aaagcattct tgcaaattag tctgcactcc aattaatgca cccaacatga
      361 caataagacc agtttcagct tggctaagca gaccagtcaa ccaggaggat gtgacttgag
      421 gacttggaga gcttgtgcct ccaccttttt tccctctctc ttcacagcag cttaggtcca
      481 attaggccag ttaatctgcc taaaaccatt ggaaaggaag gatttctcta ataaagatga
      541 agcatagtct gagaggacat acaaattaag tctactcttt tcaaaaggca gaaaattcca
      601 agatttctct
//
LOCUS       KCPA01002875             532 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 315973tic ultra-conserved element locus
            uce-793, sequence.
ACCESSION   KCPA01002875
VERSION     KCPA01002875.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 532)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 532)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="315973tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>532
                     /note="ultra-conserved element locus uce-793"
BASE COUNT          177 a          123 c          114 g          118 t
ORIGIN      
        1 caagctaaac actaaacatc aacttgttct tacagggagg attcaaaccc taaatataat
       61 aaatggggga ttacgggttt ggagtgttag tgcaaaacaa cactggaaat aagtcagctt
      121 ttccagtcag atttcatcca catctgcagc ctccacacca tcatcaaaat gcaaccccca
      181 gccctgctgc ttttataaat aataacacag ctgccaatgg cagtagtgct gggtcagctt
      241 ggctctttcc tgctccagct gcccataata ttcaggatga gattctgggg tcagaaaaat
      301 ctaaaactca gcaacaggaa aagcaagagt ccctagaaaa acagcagctt tcccctggtc
      361 aaagtcagga agcaggcatg ctctctgaac ccgagaaagc taaatctgaa gaaaaccagg
      421 gcgataattc ttcagagaac ggcaatggaa aggagaaaat aagaatagaa tcgccggttt
      481 taacaggatt tgattaccaa gaggcttcgg ggctcggtac ttcgacacag cc
//
LOCUS       KCPA01002876             746 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 316086tic ultra-conserved element locus
            uce-6211, sequence.
ACCESSION   KCPA01002876
VERSION     KCPA01002876.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 746)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 746)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..746
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="316086tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>746
                     /note="ultra-conserved element locus uce-6211"
BASE COUNT          231 a          134 c          135 g          246 t
ORIGIN      
        1 ttttttttta tatactttgg tttggcacat atttaaatgt gttaaataag cacaagtgct
       61 aaactggaaa aatactcctt catgttacag agtaatcaga ctgtagcgtg cactgtttgt
      121 gagaatcaca attgtacgtc ataaaccgta caattgaaat catggaattc gttttttttt
      181 ataaattttc acccatttca gttcaagtaa cattctcaca gaatacaggt tttgtaggga
      241 tacgatgttt cctagctgta ggcttggcct ctcccttcta ctggctgtaa tttacttttt
      301 ggtctctgtc gccttgagct tgccttctga ctagtttgtt gaatgatgtg ctaatccatt
      361 atatttttca gacaagtgta tcgaccagta taaacagact ggagggcaca aacctaaatg
      421 aaagctatac ttccttgaat catttaaaaa gctcctgcag tggtggcagt gcaaaataac
      481 tttcctctgt acattaaata aagagggaaa tttcaataaa taaaattaag attgtgggga
      541 atgtgagcac agggtgcatt tcacatgttt agttatagga agaagagaca gataatgtta
      601 gtcaaccact tgagaacgtg cttctagatg ataaatttga aactgagccc caagccctgc
      661 attacttgcc atttcccatt gtccagacac tctcgcaaca cataagtcat gtactgtatt
      721 gaaacatttt tatacaaata aagaat
//
LOCUS       KCPA01002877             572 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 316196tic ultra-conserved element locus
            uce-541, sequence.
ACCESSION   KCPA01002877
VERSION     KCPA01002877.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 572)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 572)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..572
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="316196tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>572
                     /note="ultra-conserved element locus uce-541"
BASE COUNT          189 a          112 c          115 g          156 t
ORIGIN      
        1 agagctgcat tatagaatgg ttatttttta aaagatcctt tattttttca tgagaaaaat
       61 gatcaaactg ataagccaag agggaaaagt tggagcagct gaagtccttt ttggaaaatt
      121 tcaggtaaat actatatttg gttggatctg gattttccag cgtccaagtg cagtttgtga
      181 agtttttagg aaacatttca cttacagaat acgatccata aatgaccccc ttcaccaacg
      241 tggaacacca gaagtcttgg gcagcattaa atccaaacat aaccagtaga taggtggaaa
      301 atatataaat cagcaaatta cgaacagcct tcatcctatg tcatttggcc tgcaggagat
      361 gaaatgaaat aaaaatgcaa gtagaattct tcacgcatag aaaaccaaac tccttccaat
      421 attcgagcca gctgttttca agcttgcagt tagagcccct ttcagaaaga agggcaggta
      481 atttttattt tataacgcaa gggccggggt tgccgctgtg tgcacagcgc catcacgtgg
      541 acatctccac agacatgtct tccacagaca aa
//
LOCUS       KCPA01002878             363 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 316302tic ultra-conserved element locus
            uce-764, sequence.
ACCESSION   KCPA01002878
VERSION     KCPA01002878.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 363)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 363)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="316302tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>363
                     /note="ultra-conserved element locus uce-764"
BASE COUNT          108 a           77 c           77 g          101 t
ORIGIN      
        1 tttcctggga agtcaggcgc agccacgcgg cgtaacgctg aggtcacttg gactggagtc
       61 ttcaacacgc aatgactttt aacaggcaac atctgacagt accaaagccc tttgcagccc
      121 tgggtgaaat tatgataaca agagaaaaaa gctattactg ccaccatgct ttcattatgc
      181 aaatgatatt aagataggct gtgcagatcg cctgtggcta tgctataatc tccatgcagt
      241 gattataatg tgtcaaactt agtcattttg attatgacat gttaattaca tgccatcctc
      301 atgcagacat gaatattact cgcagtcaaa caaaacacaa attgggggca ttggttgttt
      361 cgt
//
LOCUS       KCPA01002879             609 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 316413tic ultra-conserved element locus
            uce-686, sequence.
ACCESSION   KCPA01002879
VERSION     KCPA01002879.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 609)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 609)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="316413tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>609
                     /note="ultra-conserved element locus uce-686"
BASE COUNT          222 a          117 c          130 g          140 t
ORIGIN      
        1 ctggttaaaa ataataagca aagtaatggg tagttacagc tccattggga gctgcccagg
       61 aacaagaagc acttaggact ggtgacagag acaaaataaa atttttctat ttagcaccag
      121 tatcacctga ataaggcagc aaaaatgtgc aaataacaaa agacatcaga ataacgaata
      181 acagcagaca gtcactctgg acctattctg aaacaacaga atacacttta aaaagcagta
      241 aaaccaataa aaatccagtc atcttgaaaa aggagagtct tcgttgcaat aaaggcagtc
      301 aataaagaag ctctctcatt taaacatcaa atgcacattg ttttgcaaca cctgttattc
      361 agccataata gctttcttaa cctgtcaaag tgtttaagct gaggaaaaga aatgggcctc
      421 cagctgtgca cttcggtgga gaaaggctgc gcgaagcgat attagtttaa tgaaatgtgt
      481 acagattgta attgtggtaa taagagggca attcccagag gggcagtagg aaggcagtga
      541 gtgcagccaa gcagagaaca gaagctgcac actgatcctg tctatggacc ctcacccctt
      601 actgtacag
//
LOCUS       KCPA01002880             468 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 316517tic ultra-conserved element locus
            uce-6736, sequence.
ACCESSION   KCPA01002880
VERSION     KCPA01002880.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 468)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 468)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="316517tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>468
                     /note="ultra-conserved element locus uce-6736"
BASE COUNT          171 a           81 c           77 g          139 t
ORIGIN      
        1 aatttgacac ctgttaattc aagcgttgcc atcgtaaaca tagcttgaac aaagtagctg
       61 gttatgatat caaataaagc cagcataaaa tcacaataaa aatccaggag agtaagaaaa
      121 cccatgaaat cagtgattta gattggtatt ccattaagta aaagcaagca agattacttt
      181 tcctcaacga tatatttcaa aatgtctttt ttaagccttt cttcaaggag cgatttgaaa
      241 tatttactac cagacagtac ctaattttag gttttaagtg ctttaacagc tctatgaaat
      301 atgatcagca gctgcaatat agaagtatgt tgaataaacg cttcttatga gacctgcttt
      361 accctgagtt cataaaatcc caactttcaa gaaggaaaaa gataacagaa aagagctgtg
      421 gcctagagca tttaacagca attccaagaa tcttttctgt ggtaactt
//
LOCUS       KCPA01002881             557 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 316626tic ultra-conserved element locus
            uce-211, sequence.
ACCESSION   KCPA01002881
VERSION     KCPA01002881.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 557)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 557)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..557
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="316626tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>557
                     /note="ultra-conserved element locus uce-211"
BASE COUNT          186 a           77 c           96 g          198 t
ORIGIN      
        1 tatctgaaac cttgtgaaac tctcccctga gataaataca agctacatat gtacatatag
       61 ttatttcttg tgtttgattt tactaacaga attgggaaca aagtaatagc tgtgtaggtt
      121 gtttaatctt ttttcaaatt gcagtttcat tgctggataa aaaaagattc attgtaaggg
      181 ttatctggtg gtgttgatga atagttgcaa ttaatacatt cccttaatta gtctgatatg
      241 cagaagatgc acctggcagg tcattttaat actacaattg atttattgct gctagaaatg
      301 attttaccag ctaccttcag agagcacaat tagagaggat ttcataatgc attttcactg
      361 agaaataaac ataaaaggtc tgtgtaattc agaacaaagc agctataagg tactaatggt
      421 ttatggattt tattaatatt caactaacat tagtatcaat tttagagaac agcaactatt
      481 ttctatttga agtatccatt tttagtatga gagtgtttca tttcaataaa cccacgatat
      541 tttaaatcag atatggg
//
LOCUS       KCPA01002882             706 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 316736tic ultra-conserved element locus
            uce-5228, sequence.
ACCESSION   KCPA01002882
VERSION     KCPA01002882.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 706)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 706)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..706
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="316736tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>706
                     /note="ultra-conserved element locus uce-5228"
BASE COUNT          235 a          160 c          139 g          172 t
ORIGIN      
        1 aaacctcaac acaaaccagc agctaaatca agagccaaag gaaggaacct ggtggcaatt
       61 ccatccaaga gaaatcactg aaacaaaccc attttgctca gaacagaaat ctcaaacatg
      121 gcaggttcat taggagtcat ccatcactgc gttcccactt ccatagcctg cctgatactg
      181 agaagatgcc agtagcagag tcacagcaat ggcattgaca gggggatttc atggaggata
      241 gtccaaaccg aaacccgata aaaatggaga aaaataaaaa ggcaccaata taagccacaa
      301 catttatgaa tacaatatat tttaactctc tacatggagg aagccaacct gctccttttt
      361 gatcttcttc tttggcacaa cttcggtgga tttctcagac tcggagcggg ttcgaatcga
      421 tcttctctgc tgcttctttt ctacagaacc tgaagaagga aaaaagtttc cattatatgc
      481 ttccttatat tcctgaggta cacctagatg tgtaacacca aaccaagaaa aggaacgaaa
      541 ccaagacttt gtcctctttt gaatgtttta tttttaaatt cagttccaag ctattgacca
      601 gctggtgctg tggctgcaga cacatgttct gagtccagag acagatcagc ttcagaaaac
      661 agacaacaga gtggaacaaa aggctggcat tcagcttagg gcaaac
//
LOCUS       KCPA01002883             673 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 316844tic ultra-conserved element locus
            uce-1060, sequence.
ACCESSION   KCPA01002883
VERSION     KCPA01002883.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 673)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 673)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..673
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="316844tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>673
                     /note="ultra-conserved element locus uce-1060"
BASE COUNT          205 a          104 c          126 g          238 t
ORIGIN      
        1 agcaacagca ggagcatctc atgagttatg ctttggactt gtatggcact gccattttaa
       61 atgtgtgtgc atgtgtgtaa attacagaat tgcagaaagc tgaaaatgat aacacttcag
      121 ttgtagaatt tctgtaagat gcatcttttt gagtatcagt aacaagcttt tccttttttg
      181 acaggctggt gaaaattgcc cctcaatatt atgacatgag caattttcca cagtgcgaag
      241 caaagagaca gttggatcgc atcattgcca aacttcagtc caaggaatac tcacagtact
      301 gaatttatgc tttgaactga agttattcag aggacagctt taagagatga aaggattcaa
      361 agttcaagtt gtgctcttca ctttggttca ataatggcct ttatttgaaa gctttttaat
      421 ttttctttac agtaaatatt ccattctgat ttcataaatt aaacatttat gcctcccttt
      481 tgtgttgaca ctgtagctca tactggaaaa gctaatcaat gttttgcagt ttattgaaag
      541 tagttctata tataacaatg ttataagcat ttctttagaa atggttgaaa atgcttctaa
      601 aaatgtgatt atcgaccatg gtatgcatga tcgttgtaat tgttgacatt ccttttagaa
      661 gttgtgaaat gtt
//
LOCUS       KCPA01002884             344 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 316944tic ultra-conserved element locus
            uce-1649, sequence.
ACCESSION   KCPA01002884
VERSION     KCPA01002884.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 344)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 344)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="316944tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>344
                     /note="ultra-conserved element locus uce-1649"
BASE COUNT           87 a           40 c           81 g          136 t
ORIGIN      
        1 ttttgcttat ttataggtgc tgtattttat tatctgattg ttaggaaggg atgaaagggg
       61 gcaaatattc tttagaggga tagactgccg gcagtattgg gtataattta caagatgtag
      121 ttgtcatact gtatattatt gattgaagac ttttttgacc gtattgtgta tcattgaact
      181 tttgtcttag gtcagcatct ttttgatgac actttaatgg tgcattcatt acttcttaag
      241 tttaattaat attacttttt gggggaggga gggatggggg agaggagttc cgactttttc
      301 ccaatattac acctcagtgt gcttgtatta attcattagt agga
//
LOCUS       KCPA01002885             489 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 317051tic ultra-conserved element locus
            uce-1690, sequence.
ACCESSION   KCPA01002885
VERSION     KCPA01002885.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 489)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 489)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="317051tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>489
                     /note="ultra-conserved element locus uce-1690"
BASE COUNT          155 a           75 c           94 g          165 t
ORIGIN      
        1 aaattttatt taaagttcac agcagtctat gcagctagtg cagttttagg ttaagcatat
       61 tttatccata attgctatat ttggttctca agttattatt gtagttcctt ggggtacatt
      121 taaatccacc ttattgtaat agattatgga atatagtggc taatgtgtct aatgtaaaat
      181 agatgactat aatgatttat gatccagcac ttcagtttta ttgaacataa ggatcattgt
      241 actaaaatgg atggtgtatt gctggtttag cataaaatac tgaataacat attcaaggaa
      301 atgaatggat tggccagttc ataatattct gccccttcag ctgagaggtc tttaataagc
      361 aagagtgtca ttacacttga aaatgtatgt gtaggtaatc cattatccag aacaatgaca
      421 gtgatcggct gaagctctta ttaaagaagg gccctcctta cagggaaata cagagcactt
      481 ccctgcctg
//
LOCUS       KCPA01002886             725 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 317160tic ultra-conserved element locus
            uce-3861, sequence.
ACCESSION   KCPA01002886
VERSION     KCPA01002886.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 725)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 725)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..725
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="317160tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>725
                     /note="ultra-conserved element locus uce-3861"
BASE COUNT          272 a          164 c          137 g          152 t
ORIGIN      
        1 aaaaaaaagt ccactcaaaa agctaaggat gcttaaaatg tcttccgtgg atcagttcat
       61 ccatactaca gcaaacgcac actcgttctc ctcagaaaat acatgaataa atgttactct
      121 ttaaaatgga taaagcacac gaagcaccat ctgtcaatcc tcagaacaga acaacgacac
      181 acactcacta ccaatggact gctagaaggg ctgcagttcg gaggcactgt tccctctaga
      241 ttggtgtcca gcgacggcat ccttaccttc ggtgggaatt cctgttgcta tttacgtggc
      301 cccggcctgt gcagcctggt gtaggacact taagaacatt ttcatgcatg gcaagaactt
      361 gacaaggaga gtaagagaaa acagcagagt atgaaaacga aaaaaaaatc aaatcccagt
      421 atatatgaaa ccattttaaa acaaagcagg attcattaac aaccagcatt cctcaaaata
      481 cacgtgacac acatagccaa taaagcctga ggaaagtaag tattgtgaca ttaacacagg
      541 gcaacagtga aagttatgga ggttacagaa cctataaaca aacgcatctc tggtgcaaca
      601 gtgaagcaga agacgcccaa catcttcttc atacaaaacc actgagcaaa gatcagctca
      661 acagtaaagg gcaagctagc aaccatacaa aacaaaatta cagactggaa aaattctttc
      721 aggaa
//
LOCUS       KCPA01002887             845 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 317251tic ultra-conserved element locus
            uce-4642, sequence.
ACCESSION   KCPA01002887
VERSION     KCPA01002887.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 845)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 845)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..845
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="317251tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>845
                     /note="ultra-conserved element locus uce-4642"
BASE COUNT          223 a          193 c          208 g          221 t
ORIGIN      
        1 agatatcttg tttatgttat ttcacctcag agggtcttat aagggcttga aggacacctt
       61 cagcagcagt aatggctggc agggaagtag cagcatgtat cccctttcct gccctgcctt
      121 ttatttggtc aaggaagtca cttgcacttt ctttcatcat tcctcctcct catctccctc
      181 ccccgtgtcc tgactccctg cccggattca agagcttgaa ggtctgctgg tggtagccgt
      241 ggtggctgca gggaggaggg aaaaaaagca gagggagtaa aataagtgtc aaggaattca
      301 ttgtctgttc tccacctgtt gttattctgg tcccaatcaa cctgctagcc aggctggagc
      361 cagtggccat ctggaaacac tgctctgttt ataaacttgg catgaagcag cactcccggg
      421 ccctgacctc ccacacaaat ctggaaacaa ttagagcaag atgataggca ggcaggcagg
      481 gagagaaggg gaaagagcgc gtgagagaag aggctgcaga gaaggggaaa aacagacaga
      541 gtgaagggga gcacggagaa ggtggcaaat gtttttgaga tgcaaatatt tatgcccacc
      601 ttaagtgacc gctagctcat taattattgc ccttgccaaa acagcttttt tttccatgaa
      661 ggctaaggca tgcctcttta cctcccccag caacacaggt tttccagatt atattgtatg
      721 ttttacactg ctgaaagttt gcctgtatga atcttaggaa attgagttag gtccacatgc
      781 tcagacccat acacattctg tacttggtgg tattgaaaac tggagcccaa atattgcagt
      841 tccta
//
LOCUS       KCPA01002888             753 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 317357tic ultra-conserved element locus
            uce-6265, sequence.
ACCESSION   KCPA01002888
VERSION     KCPA01002888.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 753)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 753)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..753
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="317357tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>753
                     /note="ultra-conserved element locus uce-6265"
BASE COUNT          253 a          123 c          138 g          239 t
ORIGIN      
        1 ttaaagtgga cacaatctta ctcttaagag agttatgtct ataaattgaa ggaggtctcc
       61 acaaagacat gattccagct ttcacaaagc tgaaatatta tccagcagaa gtctttatgg
      121 aaagctgaag taaaaactaa gtcagagacc tgctcttgaa aggccatgtt caagagaaca
      181 taatggagca ctgagagaaa atgacctcac aaactgtcta cacggcacct ttattcctct
      241 gtacttagat tgactttctc gtactaaaat cattttccgt tttaaccagt taaacatgcc
      301 tcttctacag ttccattttt gatagttaaa gttggataat acagtatttg caaagagcat
      361 gtttggtcat ctgtggcctg tctcatctga tacaccattt agcaccagaa agcaaattaa
      421 agagaaaaca aaagtaacac ttgtttgaaa gagatcatta aatgtatttt gaaaagccta
      481 aagttatata tttaacagtt tttatatgtt gtatatttgt agaaaatcct atttaacaat
      541 taacgtgata actctgacag tcatgaaaag tggttcagag ttaagttgtg ttttattact
      601 tcagttgtct ctgaagtgac tggtgtagtt tgctttcttc cattgggaca ttctggatgt
      661 aaagcatgac cagagaggac tgtgtagaaa aagcaaagaa taatgttgtt tatattacat
      721 aaatgcattc aaccattgca ctgttggaag gca
//
LOCUS       KCPA01002889             580 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 317470tic ultra-conserved element locus
            uce-3788, sequence.
ACCESSION   KCPA01002889
VERSION     KCPA01002889.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 580)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 580)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="317470tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>580
                     /note="ultra-conserved element locus uce-3788"
BASE COUNT          189 a           89 c          108 g          194 t
ORIGIN      
        1 ttgcacataa tttaaaaaag tttatctcca aaatttgagg ttttattagt gattttattg
       61 tgtaggttag gggggagaat attggaaagg attaattgag aatgtcaagc cttttcctct
      121 gagaataaat tcattttgac tagaacagga gacagttaac ttctgaaaag catcaagact
      181 gatgattttg tctatatagc attgacctgg aagctcagcc attcagacta ataaatcagg
      241 caatttatat ttaatcatta actaactccc gagctgaaca gctgttcaaa attagaaatg
      301 ggtcaccccg gccaggatga cattacaggc aatctataat gcattagaat aaaattatag
      361 tgatttttaa ctgtctggaa atttattaca ctgcatgttc caactcttaa acccttgtta
      421 gccaatgtca ctagtgattt atggtgcttg gctggtatgg taaaattact gaagatttaa
      481 atagacaatc attctatgtt tagcaaatct tcaaatttca aagctatttt ggagagtgag
      541 atgggtactc ttcattgttt atgacttacc tcagtggcaa
//
LOCUS       KCPA01002890             727 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 317580tic ultra-conserved element locus
            uce-1565, sequence.
ACCESSION   KCPA01002890
VERSION     KCPA01002890.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 727)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 727)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..727
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="317580tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>727
                     /note="ultra-conserved element locus uce-1565"
BASE COUNT          220 a          168 c          115 g          224 t
ORIGIN      
        1 ctaagagtac attcatcact taattacttt ttccattatg cctgcacatt ttatctaatc
       61 agaaagtaag cctgcttgct ttcaccttgc agggttaaac taataagacc gtgctgcttc
      121 aaaccacctc aaaattacat ataacatgcg atctcgattc agacactgtc cattaatttt
      181 gcaacatatt tggcaaatga attttaaatg caagggggtt ttgaggcggc atcccctccc
      241 tcccctagct ggccggttaa ttagcatacc tcccatgctt gttatgaagt catgggctaa
      301 tctgacatac ttggttatta acgtgctcct gactgaatca atctggcaat aaatttccct
      361 accactcttc ctaacagctc tccctttata ttccgatagt tccatgacaa taattgattg
      421 tgattcactc ctgaaatgta ccaatcccgg ggaaatggca tgggctttca ttcatcaatt
      481 tcagcttcat aagtggaaat ttatacaagg tatgcagatg tttagagttt ggggtaatca
      541 ataaggagta aataaagatt ggcattcact atactccact tgacaagctc cagcctaatg
      601 tttgtcaagc aaattaaaca cactcagact tttcacctgc tcctacaaca gcaccacata
      661 tggctctgaa gttaaaaata agaaaatgtg catacattat catacataat gtacaactcc
      721 ctccatt
//
LOCUS       KCPA01002891             642 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 317687tic ultra-conserved element locus
            uce-7994, sequence.
ACCESSION   KCPA01002891
VERSION     KCPA01002891.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 642)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 642)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="317687tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>642
                     /note="ultra-conserved element locus uce-7994"
BASE COUNT          188 a          110 c          148 g          196 t
ORIGIN      
        1 atgacagtac atatttgaca catctggcaa gcaaggcaag aaattacaga ttatgaacag
       61 gaacgaaaaa aaaattaatt aattactctg gagaagagtg tgagtgagga cataaaagtt
      121 tacagttttg cttgctgaat gattagctgt gcatctttca tcaagataat tttctttagc
      181 attacgacag tctttacctg ctttccagtg gtgcattact gccaagcacc cagctgtcct
      241 gcagctggac tgactcaggt gtggtttgca gctcggcggg caaagcagcc ggcggggccg
      301 gactctgatt cctcctattt gtcagtgagt ttctgttaag tgaggtgatg gatgggtgat
      361 gctgtgctga atgttgcttg tgagaaggtg gcaaaggctg cagggtcgac tggccttgat
      421 tatttggagg ttgttctaag aagaaagaag tttgttaaca tcttggcatt tactacaacc
      481 aaagcaggat gagaaattca atataaacct atcatctaat atatttgcat attattctat
      541 tagcagacat tcagtgacat tctgtaagag caagtttacc cttgatacac caagttctaa
      601 ttaatacaca acagatggta aaattgcttt tggttttaat tt
//
LOCUS       KCPA01002892             533 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 317795tic ultra-conserved element locus
            uce-5165, sequence.
ACCESSION   KCPA01002892
VERSION     KCPA01002892.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 533)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 533)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..533
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="317795tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>533
                     /note="ultra-conserved element locus uce-5165"
BASE COUNT          168 a          111 c          106 g          148 t
ORIGIN      
        1 ttccctcagc aaaaattatc atcttttaca catgctttaa aagggtggga gctagggaag
       61 caaagcagga tctggtatta gtccttttag tcgtcaggaa attacaaaat gtacacttgc
      121 ggagtaagca attttcgcag tctgctggca catccatctt tttaatgagc cttgtttata
      181 acctgacgcc atgtttctag tcacctaccc tgtttacatc tttggcccct ttaattaaga
      241 gaagaaccag ttaaaagaaa gtaagaagaa atattaatat gatctgatta attcagctag
      301 cgggaggtta tggggtacca aggttattat aacctataaa ggcaacacga gcaaagctgt
      361 gttcatttgt aattttatta ggcagagcaa attagtgagc ccacatggca gtgacaaaag
      421 accccttcct attctctctt accccccacc gaaagggcca ggcgcctaaa gttaggctcc
      481 atattaggca aatgagagct gataaatctc agccaacaac taatgagaat ctc
//
LOCUS       KCPA01002893             722 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 317905tic ultra-conserved element locus
            uce-891, sequence.
ACCESSION   KCPA01002893
VERSION     KCPA01002893.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 722)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 722)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..722
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="317905tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>722
                     /note="ultra-conserved element locus uce-891"
BASE COUNT          206 a          135 c          166 g          215 t
ORIGIN      
        1 tttcggacaa tgaaaattgt gtttgttacc acgtagtcat ggatgtgttg ttttaatggg
       61 gttacagaat aggaggaagg tagcaagaaa agacaagtct cattgaagag tttattttga
      121 ttatatacat atgttttgtg tggtctaagc tgtccgcaca aatatgaaat gattaaatgg
      181 agcagcaaca agcagaaagt attgcctggt gagagataat actatagccc tctaattggc
      241 tctctaccag cattcagtgt gactgatttc agctgtagca ttaccagtct tcttccacca
      301 gcactattat ctcagagtga cacttccatt actctgaacg gagaaagatg aacgtcacct
      361 gtcaggggct ggttaattgt gttgctagat gtatgttgcc agggcgcagg ttggacattt
      421 atgaacataa ctgcttcctc tgatgtccac catccttcaa cgatcaatac agctcttaca
      481 gtaagcgcat aattgagtga aggcacttac cactgagggg ctgaagatga gcccgttgcg
      541 caattttcat tgtccataca ttcagcacaa atgagctgat atctgccctt tattgtgtgt
      601 tgctttgtgg aaatagaaac taatgtgcca ctttcatttt tttcctagat aaatggccaa
      661 gatgtccaga atagggaaga ggcagtggcg ttgctctcca gcgaagaatg caggaaaatt
      721 gt
//
LOCUS       KCPA01002894             382 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 318007tic ultra-conserved element locus
            uce-3425, sequence.
ACCESSION   KCPA01002894
VERSION     KCPA01002894.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 382)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 382)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="318007tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>382
                     /note="ultra-conserved element locus uce-3425"
BASE COUNT          119 a           73 c           83 g          107 t
ORIGIN      
        1 taacgatttg ctaggcaatg tgcaattctc gccttttaat atccaagaag aaagagttct
       61 ttataataat ttggctcaaa tgtctacaca cattgctcca gcgtctgtag cagcatgtgt
      121 ttctaggatt gttctggaag agaaaatgca gaaacagcag ggagcagaag ataaacaggc
      181 aattcgtgac tcattaaaac aagcattggt agccaacatt gtggagtgtg tgaaggcccc
      241 agatccaact cgcctataaa cttttttacc agctggactt agcatctgtc agagtttgga
      301 aggagagata atctggtaca aatgatttca gtgtgtcgca tttattaacc tgacacctta
      361 cataacactg ctgattggga ac
//
LOCUS       KCPA01002895             567 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 318116tic ultra-conserved element locus
            uce-6910, sequence.
ACCESSION   KCPA01002895
VERSION     KCPA01002895.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 567)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 567)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="318116tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>567
                     /note="ultra-conserved element locus uce-6910"
BASE COUNT          169 a          107 c          126 g          165 t
ORIGIN      
        1 ggagtttaga ttttcttttt tacacttaat caaaataagg atcaagagtt tattaaaata
       61 caggaataaa agtgtgataa tcctacacaa taagtgactg caaagaggga agtgacgagt
      121 taacgggagg cactctgaat atttggaaga caaccttcct ttaaatgaga cactgctggt
      181 aacggtaatg gggaatttgc aatgaaggga aggacatgca attataatct ggctgggccc
      241 cactggacaa aaagtgattt acttgaaagc tgcctttgca ctcagtaaat gttcctgtta
      301 tgggctgctc agcctgtgac agctttccag atgtcaatca aattatcatc tatttacagt
      361 tgatttggta gtgtcatttg caatattccc tacgtttctg atgaaattgg aagcacagaa
      421 ttttctccag tttgccctgg cactcgagtg ggcaaactgc tctttgcaaa tgtcatgtgt
      481 ccgcttatca gcactctaag gagagcgatc ttccattcgg ctgagtgaat cgctaccaga
      541 tgcaaatctc tcaatcgtca agggaag
//
LOCUS       KCPA01002896             684 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 318224tic ultra-conserved element locus
            uce-1769, sequence.
ACCESSION   KCPA01002896
VERSION     KCPA01002896.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 684)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 684)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="318224tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>684
                     /note="ultra-conserved element locus uce-1769"
BASE COUNT          212 a          115 c          123 g          234 t
ORIGIN      
        1 tctgagtgta gttgagtttt atagatctat ttatgagatc caatactgta atgatgtaat
       61 tttacttgtc taataaatgt agctgtacaa cgaaggatag caaacatttc cattgtgacc
      121 aaaatccttt aaactgcagc cactttgatc ttagagctca tgctatttaa taaatgctgg
      181 ccattcttct aacaatcaca attatttaaa gggttttcaa aagggataga gcaaatcaaa
      241 taaaacaatt actgttgtat ctcattctga agttaagtgt attttttatg tgagtcttgt
      301 ttagtgtctc ctcccagttt tcatccatta tcacaataat tgagtttgta gctggaatta
      361 aatttatcaa attgtgttat cctcttttga aattggatag gtatcctggc agtgggagct
      421 agaagttaat ctgctttgct aaagcctcca gtggcacagc ggcaacagga ttgagaaggc
      481 tcaaacattt tcctgtcacc ctggacacga tgtaatttct cctcaatccc ttgtgcaaat
      541 aatgacattt gaatcgagca ttaacaggct taattacttt aaaattgtca ttttaattta
      601 cactgatata gtattgatca tacaagcaga gattaagctg ttcactggag cagatgatgg
      661 ggaattaaac attaaagggt cctc
//
LOCUS       KCPA01002897             569 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 318327tic ultra-conserved element locus
            uce-2973, sequence.
ACCESSION   KCPA01002897
VERSION     KCPA01002897.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 569)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 569)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="318327tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>569
                     /note="ultra-conserved element locus uce-2973"
BASE COUNT          173 a          115 c          126 g          155 t
ORIGIN      
        1 gcccttttta taagcaataa gaatttaata actgagggca actctatagc aatatttata
       61 tgggtcaagt ggcttaaaag tatgcaataa atgtaaagtt atgaaccaca ttgccccttt
      121 ttaaataatg cagctagcac caagatatta tgtttcatat tctggtttta gcctaggctt
      181 taggagtgca ccagacatga aaagttatac tgatcccata atagagtcac tgcctgctta
      241 atatggtgtg ttatgtagag ctccagatct tagaccacag caagaacgtc ccagatgata
      301 tcaacaaaac cttcgctttc tcattagcaa tcagcaaatt ctcctggtgg ctgctggttt
      361 caaataaggg caagtgcctc aattccgagt gggaagccca ataggataat agaaataatg
      421 cagtctaatc agtggtgagt acacgagacc tgccagggca ggcactggtg ggctgggtga
      481 cttttaacag ccctgccagt cctgaggagc aggatccatt cgtgcatccc caccaccagg
      541 ggtttgagga tgtttgtata aaaatgaag
//
LOCUS       KCPA01002898             693 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 318437tic ultra-conserved element locus
            uce-2516, sequence.
ACCESSION   KCPA01002898
VERSION     KCPA01002898.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 693)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 693)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="318437tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>693
                     /note="ultra-conserved element locus uce-2516"
BASE COUNT          184 a          140 c          144 g          225 t
ORIGIN      
        1 ccgttctggg cttgggtgct cgcagcctca gtgacaggcc actctccgct gctcctggtc
       61 cccaataatt agcctgctat ggcagctacc tcttgtggtt ttgcctgtga gagacatttg
      121 acacagcaga catcagaggg atttttcagg aggctcttgt ggcgtccgaa tggctcttaa
      181 ttaaccactt aggtatcctc attcactctc ctgcttggca ctttccaaat ggtaggggtt
      241 gcactgtgga tctaaacacc ggggaagcat gctatcaaaa gatcttgtaa atgaaggctt
      301 gtgtaaatta tttttaatga ttccctcctg gcacatcatt atgtttgtag ttacacacag
      361 gcacttcaga gatggctcat cttccgtaag gtcagctgca ggaccaccat aactagctgc
      421 agtcagtaaa tggcttatta attagcacag tgattttaca ttgctaagag ctctgatgta
      481 tggagctaga attgtaattg tgtaggatcg aaataataag ccatctcagg gctccttatg
      541 caaattgcca tattataaaa tcattaccta tctaaacact gagttttaat aagaattaca
      601 atgatgaatt ttatgataat tgacactcaa attttaatct cttggatttt tatcattttg
      661 gtggttaaag tgtgtttcta attaaatgtt gct
//
LOCUS       KCPA01002899             790 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 318544tic ultra-conserved element locus
            uce-5676, sequence.
ACCESSION   KCPA01002899
VERSION     KCPA01002899.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 790)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 790)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..790
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="318544tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>790
                     /note="ultra-conserved element locus uce-5676"
BASE COUNT          242 a          153 c          185 g          210 t
ORIGIN      
        1 tttcctctaa ctgaacagtg aggaagaggt gatttcagag ctaactaaga gttaactggc
       61 tacatttcaa ctgtcaccat tgtcttaaat ctacatagag agagagagcc agagaggtat
      121 aagtacagca ggccactggg aaattcataa gtagaaattc ctcctcagag caaatttttc
      181 cagtttgtct tgatctttcc ctatttttta aacacaacgt gtgatggaga cgattgttat
      241 tatccaaagg acctgacttg ctggctcact gcatctctgt ttatgaaatg ccataacaaa
      301 agtgagctca cgcttgtgtg cttccaatgc atgatgttcc tgtgtgccag atgggcactt
      361 tcatgactgt atgagcgtgg attatttcat ttcctacatc tgggactcca aatggctgta
      421 cagaatgcca caggagagag gaatagatct tcagctgggg aaacctacct tcacagggga
      481 accagctaca tcagagggga cgaggcagaa aagccccgag tgatatctga aagttcacaa
      541 gggccataag gcaaaccttt agaaccagga acaagacaaa aataaacaat aactaatgct
      601 ggatgtcagc tgtgcagagg gggagggaaa atataccata agcagtttct tgtctggcca
      661 cagaagatgt gtttggaatg ctgttttgta tttcagctca gaaattttgc tgtgaccttc
      721 agatattgct gggtattaca agttctacag atagccagag agaaatattc caaggagaga
      781 tggcatgtac
//
LOCUS       KCPA01002900             686 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 318654tic ultra-conserved element locus
            uce-1786, sequence.
ACCESSION   KCPA01002900
VERSION     KCPA01002900.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 686)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 686)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..686
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="318654tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>686
                     /note="ultra-conserved element locus uce-1786"
BASE COUNT          247 a          122 c          117 g          200 t
ORIGIN      
        1 aaacacccta atttctattg tctaagcatt ttcattgact aaccagggaa aaaatagtat
       61 caatagcatt tacattgttc tataaatggc ctgagcaaaa tttcataata aatcctcagt
      121 gtagttggaa ctcatctgtt ctttgcactt cctactttgc agatgagaca gtctcaaaag
      181 actgggttgg ctgaagactg gttggacaac tctataagtg aagtctcaag actcttgtca
      241 ttctagctgt ctaaattact taaacaagac tcagagggat ttaaagggga gaaacgacat
      301 gacaaacaat tatattctaa cacactattt ataacaatgc cctttcagat tattgttcca
      361 ctcagactga cacattactg taatcccagg gatgaatcaa gggacttaaa gttagatcgt
      421 gcacagcttg taggcataaa aaaaatacga ataaagaact gacattcagg aaatatagag
      481 cgactcaagg ataaattctg ctgggatgag cttaatttat caatgtcaat aacaacggtg
      541 aacacatcgc aagaatacat gcatattaat tgaaaataac tcagattaaa tcactgcagt
      601 ttgacatttt gagataggca ctttatcttt tcaagaaaga gagcactata aaatctttaa
      661 tctgaaaaca catcttaatt gcgtgt
//
LOCUS       KCPA01002901             586 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 318763tic ultra-conserved element locus
            uce-6399, sequence.
ACCESSION   KCPA01002901
VERSION     KCPA01002901.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 586)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 586)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..586
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="318763tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>586
                     /note="ultra-conserved element locus uce-6399"
BASE COUNT          195 a          110 c          117 g          164 t
ORIGIN      
        1 gtgagtcata tagagaaaga gagttagccc aacaacacat ctttacacac aggagcttaa
       61 tcagattgag atcttatcag ggaattaaag aaaaaagaaa gaaaagagaa agtgctagat
      121 atcaccaact gagtttttga taacgaaaag acattgctca gttcttgaat taacctttgt
      181 gtcctagaca cactattgtt tactctttcc cttttttgtt ctatgccttc tggaaaagga
      241 cacccacaca ctgtggcagc agctgctcct attaatttaa agctattaca aaaattaaaa
      301 ttaaacccaa ttactttggc tggtttatag ctggggaacg gcttagtctg attgttccct
      361 ctggttatgg acaaaaacaa tattcctacc tacaggcagc tgccagtgga atactaatgc
      421 atctagggcc tgtcaggaag agattcagaa tgcagagtct aactgcattt cttgctaaaa
      481 aaatatctta tcatggatct gcagaaatgc accaacttct tacgctgtga gtcacaatga
      541 agctgatttg tagttagagg caggaaggca aaataatggt gggaac
//
LOCUS       KCPA01002902             726 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 318872tic ultra-conserved element locus
            uce-3821, sequence.
ACCESSION   KCPA01002902
VERSION     KCPA01002902.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 726)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 726)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..726
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="318872tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>726
                     /note="ultra-conserved element locus uce-3821"
BASE COUNT          205 a          129 c          199 g          193 t
ORIGIN      
        1 gttaacaata ttttaaaaaa atctcttcaa actccaagta tttcttgtat ttagggtttg
       61 atacacctta gctgacctgt gcaacagaaa tctgctatgt aaaaaacaac tgttacaaaa
      121 caattgtgac catggagcaa aatgcttgtc tgtgtaatgg caaggtcgaa ttctgttccc
      181 ctttgacaac ctgtttgaac aaaacggagg aggaaaaaag gaagcataat tacatgagaa
      241 gtggcagcag tgttggttaa ggtggtgcca tctgacacag cagacatctg gctcaaggtt
      301 ggggaaggtg tttcagagca gtcagtagta tcatagctac aagtctgcag ctcatctaga
      361 atggctgtgg aggactcact cactgtgcgg gaggagcact cgctcatggc agagtctgtg
      421 ctcacagagg ctgtttcgtt cctgtggata atactgctgg gagctaggga cgggcattta
      481 tatggaaact gtgagagggc tggggttttg taaaagcgtg aaggcaaaaa atcatcaagc
      541 gctggcaaag aatatggtac tagatgggtg ccactgtctg gtgagaaaga ggctctgtta
      601 actggtacca caggagaagg aagaggcagt ggagaagctt ctgttgctgt ttgtctgtgt
      661 gtctgtgaag catttacctc catcacaggg gcagttactt tctggtttcc aagctgagat
      721 ttgagg
//
LOCUS       KCPA01002903             422 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 318981tic ultra-conserved element locus
            uce-5239, sequence.
ACCESSION   KCPA01002903
VERSION     KCPA01002903.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 422)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 422)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="318981tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>422
                     /note="ultra-conserved element locus uce-5239"
BASE COUNT          131 a           71 c           81 g          139 t
ORIGIN      
        1 aaaaagtagt aaccaaatta atcagaaaaa gtgggatggg aaatgggatg acaacatatc
       61 ttgttttgaa aagttgtgta atgtaataca atattgtaat aatgtaatca tttagtgttt
      121 attttattat gtgtaccttc tactcagagg gttggcatta ttgttcctaa cagtgatgga
      181 tacaagcaga tcatgcccta tgacctctac catccccttc ctcggtatgt aaaacaacca
      241 gatgctaggc ttgacaaatc ctattcttct ctgctttgct ctaaggctaa attaacagat
      301 gctgctgctc tggactcaga aatgttcaag tgctaacctg ttgtaataaa ttctgtcaat
      361 gcagaactga aattatagcc tatctgaagg agaagtgcat ttattaagtg tgtggtcctt
      421 tt
//
LOCUS       KCPA01002904             609 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 319088tic ultra-conserved element locus
            uce-7545, sequence.
ACCESSION   KCPA01002904
VERSION     KCPA01002904.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 609)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 609)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="319088tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>609
                     /note="ultra-conserved element locus uce-7545"
BASE COUNT          201 a          134 c           99 g          175 t
ORIGIN      
        1 cttccatatg caataaaaag catttcacat gcatgaaaaa ctagtgcacc aaattccagg
       61 ctataaataa ggcaattgta aaatgtaaat acttagaaac actagcaaac ttcagccaac
      121 aaagcaggga tcagaaattt ataccctcgt tactggtaat tacagccaca ttctttactg
      181 atctgtattc ccagccaaaa cataaaagtg tcctggtgca ttacctgcct ggaactaagt
      241 cacccagagc acacgtgttc cagaaagcca atctgtggcc atgctagcac atggagctct
      301 gctgctgctg taaatgtatc tgtctacctt ttaagcaaag taactgaaag cccctcaggg
      361 tgttcttacg aaatgtaaat tcactgactt agagacctca gcataaaatc gctgctttta
      421 gtggatgaca gtttaacccc ctccttcccc taataaagca agaaaaaaaa atccagtttt
      481 tttcttcttc agtaatttag acatctaaca gaaatcagca ataaattctt aatgcttttg
      541 tagcctgaat tttgttcaaa ttcatatttg aggcttctgc tattcaattg tgaggaaaga
      601 taagccttc
//
LOCUS       KCPA01002905             633 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 319200tic ultra-conserved element locus
            uce-6535, sequence.
ACCESSION   KCPA01002905
VERSION     KCPA01002905.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 633)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 633)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="319200tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>633
                     /note="ultra-conserved element locus uce-6535"
BASE COUNT          223 a          104 c          110 g          196 t
ORIGIN      
        1 aagatttttc aggaggaaaa agccaccact aaacactcat gtactttgtc ttgtttgtgc
       61 agttctaacc cctttataaa aattctttga ccctgcactg aatggtcatg gttgattgga
      121 aaatcaatga agtgctgtga gaattgtacc tcactgttgc agaaaagcca cacaaaaatc
      181 caacttttca catgagttga agattgcctt tggttcattt actctcttaa gacacattaa
      241 aatcaaatct atcaccccat ttggccatct gtcaattctc actacacagt aaatgagtag
      301 actttgttcc ttgatcacca gaagtggagg atgttttgtt gttgtaataa atggtcgtag
      361 gccttagaga cagaaataaa tcaatgcaat ttataaagtt ggggtgaaaa tgttagatgc
      421 agttttctaa actacagaga attatgtatg gatgacttgc aataaataaa gcacagcttt
      481 agcagcttac aaaaataaat aataaagatg aaagaaatta atgtgtagtc ctttattttg
      541 aaacctttta aagcacaaaa taaatacaag aataagttgc actgcagaag tgcaagtatc
      601 tatacattta attttatctg gtcaggcaat aaa
//
LOCUS       KCPA01002906             552 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 319310tic ultra-conserved element locus
            uce-4199, sequence.
ACCESSION   KCPA01002906
VERSION     KCPA01002906.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 552)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 552)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="319310tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>552
                     /note="ultra-conserved element locus uce-4199"
BASE COUNT          135 a          130 c          127 g          160 t
ORIGIN      
        1 aattcaagtc aacctctcgc cccgggcatc ctccaccgag agcggtagga ggaggaagaa
       61 tctcactagc agcctggctt gactttgatt tgaaccattt tgaatatatt tagtcccagc
      121 tttcccctct tgaatgcgag gctgtcccaa gtttcaaagt gaccgaaaag tgacaccgtg
      181 tgcattttgt ttcttattaa tcttacacat tgacagtctt tgttaaataa caaggcgtgc
      241 ccttcaccag gcgacatttt catatttgtt agacgcggtg acctgaagtt cacctcggcc
      301 ttggacttag tttttctaaa aggtctataa cagtgtcttt tagatagcag ggtgctttgc
      361 ccaggtcact acttctaagg gaaaaataag aaaaaaatcg agggaaaatg taaacgttat
      421 ggaatgtatc gactgtattc ctttctttgt tcctgggaat gatacagccc cgaggctgct
      481 cctgcctccg tggagtcctt cccgatgggc gctgccgggc cccaagttca gcgtttggta
      541 aaggggttcc tc
//
LOCUS       KCPA01002907             737 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 319416tic ultra-conserved element locus
            uce-499, sequence.
ACCESSION   KCPA01002907
VERSION     KCPA01002907.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 737)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 737)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..737
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="319416tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>737
                     /note="ultra-conserved element locus uce-499"
BASE COUNT          229 a          122 c          133 g          253 t
ORIGIN      
        1 gaaaatagat cggctgccgt tttcataaga tgcagtgaca aacaggagat caaatttttt
       61 ttctttaaag gtgtgagata ccgagatgct gaatgcgtat ctttcctcta gtgatggctt
      121 ggagttaaaa accacgtaga tcttgatatg caacctaaat ttggcatcag gaaatgggaa
      181 attgcatctt taagcagagt acaatcaaaa atgaattaca ataaatccta tataattgca
      241 taggtcattc tctttaatga gattttatta acctgactgt caagcttttg agtcaggcag
      301 atattttatc ttcttcaact gataaaagtg tcagctataa accaccatat aaatattcat
      361 aaatctacac atctgtggca gcctatcagc atcattcttt tggacattaa aagcattcta
      421 attactttct gtctagcaga gctgaaatgc tgcctgttat agtatgtgct tggcaggcat
      481 gattgctttt gtttgccatc acaaatagca gcatcctatt ttatatactg atggtccaga
      541 atatattcag ggtttgactg aacaggatga atattatgaa gcaccatctg gttttgataa
      601 catcgggtat attaactcat ctgttaattt ttgacacatc attgatttat ttatttagaa
      661 aaattggatc ctgttttggt atgttgctgt ttgcctttgt aacaaatgca atgacatttc
      721 cttactaaac agggaga
//
LOCUS       KCPA01002908             534 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 319522tic ultra-conserved element locus
            uce-5418, sequence.
ACCESSION   KCPA01002908
VERSION     KCPA01002908.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 534)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 534)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="319522tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>534
                     /note="ultra-conserved element locus uce-5418"
BASE COUNT          154 a          102 c          110 g          168 t
ORIGIN      
        1 ctctgaagta ttagacaagc tgcagaacct gaaacttaat ttttccagag ccattggaag
       61 atttgcttct tatcactact gttcagctac agggttgaaa ggaacttgta ggagctgcaa
      121 taatgcaagc taagcaaggt tacttttagc ttcattttct tcctgccttc ttaaaaatgg
      181 ggaatgcaaa gttattcaac actgaaagga ttgtattgtc atggtctata aatgtgtttg
      241 ctggctgcat actgtacttt ctttatccga ccttgctcat tcaaagatgc acttgttata
      301 gtatgtcagt cactaatgag gcctaagtaa ttgagcctga ttgaactggc aagatgctgc
      361 ctaattataa tgataaatga aattggctga tcagctatgg agggtgaaca gtgtggagaa
      421 cattaaaaca aggtcactct gtgaaggaga accacaatta ttctccctgt ccccaaattc
      481 aggctcttta tcctactaca tagccagctc agtgtttatc tgtactggga ctgt
//
LOCUS       KCPA01002909             527 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 319628tic ultra-conserved element locus
            uce-7188, sequence.
ACCESSION   KCPA01002909
VERSION     KCPA01002909.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 527)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 527)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="319628tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>527
                     /note="ultra-conserved element locus uce-7188"
BASE COUNT          163 a           75 c          104 g          185 t
ORIGIN      
        1 tggattatat aggaaagttt cttttgaagc actcctgata ttgtgcaatg cacttggggg
       61 tcagctacac ttgactgatg catgatttat cccatgtccc tgccacttcc tgagataaag
      121 ctgctatttt atcaaaaatg ccagcaagtg tgatttagaa tttatacccc tcctttttca
      181 aataattgtt ctgattactt tctggcacgg caataaaatg ataaaggtaa ttgcacacaa
      241 atgtgagata gcaccaaaat acaataaaat taacctgaat tagcttgact tgtcgatgag
      301 aagtatttat gaaatgtatt tttgcaataa gggagactga tattatagct ggaaggtgag
      361 ttattgcctt aatgtaatac tgtttgaaat ttaaaaaaga gactgttact gttgagggtg
      421 attgtgcctt tgaaattaag ttgaagtgat tcttataatt ggcagcaata atgcattggg
      481 aaggtaatat cttttattgt gttatgccta gttgcattat cttttat
//
LOCUS       KCPA01002910             615 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 319740tic ultra-conserved element locus
            uce-3187, sequence.
ACCESSION   KCPA01002910
VERSION     KCPA01002910.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 615)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 615)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="319740tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>615
                     /note="ultra-conserved element locus uce-3187"
BASE COUNT          192 a          113 c          118 g          192 t
ORIGIN      
        1 ctaaaattca gaatcttcca gattggaggc cctggcaggg tgggatgaga gttccgtgtc
       61 atgaaactat ggccacttag actgtagaag gaaataatca aaatttattt cttgtttgac
      121 acaggaagta tcaagctaaa attttatttt acaatactag atctgaagaa agaaaaaaag
      181 agaaaaaagc ttaagaagag gaagggggga aggcagtact aaaactgcag tcttagcctt
      241 ctaaaccttt ttgcttctct gattgatact tttcaattat accttcccat ttcagtgaca
      301 tttgaaatgc tatttttttt ctagtgataa cttcaaatgc ttaagttcca acagcaccag
      361 taaccctgtt tagctgtagt agtaaattgg ttccttgtac aacataatgg cagtgacagc
      421 cttttgctag ggaaatgagt tctccaatgg gacatgccta tgataagacg tccggttttg
      481 aaattgtatt tctctgtatc agaattaaat ctggacttta tatttctttg ctgccactgc
      541 tccgtagctg gtccctatac agtacgacca aagactgaca agtaatgctt acacaggaac
      601 cctttcactt aaatt
//
LOCUS       KCPA01002911             596 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 319846tic ultra-conserved element locus
            uce-2928, sequence.
ACCESSION   KCPA01002911
VERSION     KCPA01002911.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 596)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 596)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..596
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="319846tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>596
                     /note="ultra-conserved element locus uce-2928"
BASE COUNT          214 a          117 c           83 g          182 t
ORIGIN      
        1 aaaaagacat tcctagaatt atgtatatca ttaaaatgag ttcgttataa ttacctactg
       61 ttatcatgta attttttaat ttcatgaagt tggatgcaat gaaaatgatc ttgatataac
      121 ctataagaag cagtctatgg tgaaatcgtt aatcacacaa aaagcaccag cttctcaact
      181 ctatctgaca gttccaaaat ccaggcacac atccagaaga actttctgcc ccacgtctgg
      241 tcagtaaaga aattgaggtt aacctttaat ttttaatgtc acctgcagcc agtgactgct
      301 ttttctaatg caagtgacag ataaacagca aaacactccc aagatgatac acaaagcacc
      361 acataccata agtgcatttt tatttttata ccaactcaat ttctcaaatg gataaccaat
      421 gttcctacta atttacatta agaattgagt gaggcatgaa aattgttctg atgcataggc
      481 tctatttctt taatgcactg catagtgttc tgtactttat tgcaacactg gaaaaaacta
      541 actacataca gaaactacat atacaagctc atatacgtct taaaaatcac tcagaa
//
LOCUS       KCPA01002912             638 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 319958tic ultra-conserved element locus
            uce-6258, sequence.
ACCESSION   KCPA01002912
VERSION     KCPA01002912.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 638)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 638)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..638
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="319958tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>638
                     /note="ultra-conserved element locus uce-6258"
BASE COUNT          195 a          141 c          124 g          178 t
ORIGIN      
        1 actctggaaa ggccgccagt cctgtacccc agggtctggc gctgccgttg ccaagtccca
       61 cggccccttc cccgagagga gacagcagga gccacgagaa acaacccgcc atatcttgtc
      121 cggctggtgc ctttataggg atagagacag agactatttt ttcaccgttt cacttcaata
      181 aagtcatccc aaggcattat ttacaaccgc acataattta cctatgctat ttggcaaagc
      241 aacttcggaa aagaaagtga atgaataaat acttcataac tgctggtaga acagactgga
      301 tcctgtaatg aagaaaagat ttatgtcacg ttcttccagc ccaaatagca gcagcctctg
      361 tttgtctcag cccagtgctt ctatttaaat gttactttca tatattatgt ggcattaatt
      421 taactatagc tcattaaggc agaatgaaat ggttaaatta acttatcaac ccataatgat
      481 gatgaatgag gtattaattc agatacaagc tgggcaattt gcaagtttac gcattctgat
      541 ggttctcaaa taacattttg aatagcgggt cagcgcctca atcaattaca taagcatgta
      601 aagtcggtct ctcggaaaaa aatccttttt catgcata
//
LOCUS       KCPA01002913             478 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 320067tic ultra-conserved element locus
            uce-1344, sequence.
ACCESSION   KCPA01002913
VERSION     KCPA01002913.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 478)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 478)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="320067tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>478
                     /note="ultra-conserved element locus uce-1344"
BASE COUNT          149 a           99 c           81 g          149 t
ORIGIN      
        1 aaaaaaattg taattatcca cagttttatg aatccacctc cccttaatgt tcattattta
       61 aaccagcagc aattacaagt tcaaaggggt ttagagggcc agcaacccgc ataatcactg
      121 ccaaattaag cgggactcat tcgtcacaga agagtacact ctgagcggtg aatcatgcat
      181 gcagtgacag gcactgattt acataaagac gaaatctgtg ccctctaggg ctgagtgtta
      241 ctttatctca gtggccctgt gatatatgcg ttttcttttg gtgttaggaa ggttcagaga
      301 ctgatgctgt ctaatacatt atattttatt ctcaccatca ctactactgc ctaaaaaata
      361 ctaataaaat actgcctaca ctaattcgtg tatttaacta acaataatca aaacttcaag
      421 gctcttgggt ttttaaaagc aaagttttgt ccagcttttc taatctgtta caatacct
//
LOCUS       KCPA01002914             561 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 320176tic ultra-conserved element locus
            uce-5129, sequence.
ACCESSION   KCPA01002914
VERSION     KCPA01002914.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 561)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 561)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="320176tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>561
                     /note="ultra-conserved element locus uce-5129"
BASE COUNT          149 a          112 c          116 g          184 t
ORIGIN      
        1 taattgagct gtataattaa ttaagtatct aaagcctatt ctgcatagca aaagttttgg
       61 tttttcttaa gtgacatttg gacttttgaa gaaaaaattg gaaatgctaa tgtttttcat
      121 ccaactaagg gaagaaaata aaaatgtctc catagcaaca aagcttcttt ctacatggtt
      181 tcctaaaata tgcgtgaacc agaagcagat gcctgatttg agaatctctc cttcttcagt
      241 gtaaacaaat aacttatagg caggtgttgg aaataatatg gaaatcctat tagagagcgc
      301 tgggttcctg tcagtcagga agcccctgcc acaaaggggt tgcttgtctg aataaaggag
      361 gcagagtaaa ttctcgttag gctttagctt ttcccaggaa atgattgtct ctgcatgctc
      421 tttctcctgc aagtctgaat gcaagccgtt tcttctactg attgccaccc ccgctttctc
      481 cctctcttct cttgctggat tagcacttga tgtcagtggc gtgctgctgc tttgggtgtt
      541 ggtgatttta acccctgttc c
//
LOCUS       KCPA01002915             621 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 320287tic ultra-conserved element locus
            uce-1836, sequence.
ACCESSION   KCPA01002915
VERSION     KCPA01002915.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 621)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 621)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..621
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="320287tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>621
                     /note="ultra-conserved element locus uce-1836"
BASE COUNT          206 a          114 c           95 g          206 t
ORIGIN      
        1 aaaaacccca acagaacaca gcacttgccg tctcctctgg ctgcatagaa catgaaaaga
       61 gtttttattc aaatgaaatt atacaaattt tttctccttc ggcatgctat agtgaacaca
      121 agcttaaagc aatcttttcc aatggaccat tttacttatt ctacaatttc ttacccaaat
      181 tacacaggta taattatttt gacactgtaa tgaaaagaaa atgggatttg ggcactgtgg
      241 gtttatctaa taacactatt tcttgccaga cttcacagca ctgacaatca caaagagccc
      301 tgtccattcc aataggaaat atttgatttt actgtaggaa cattatttat tttcaccaag
      361 ttactattat cagaaaggat atgatagctg aataataaaa atgaaatcaa gaaattctgg
      421 tgtttcaagg ctttattttt ttctgctctc acttttgaca ttttcttccc ctggagagac
      481 aagataaagt gctgtcataa atgggtgact tttcttgtca aatgacagat ttgattctcc
      541 atggcaacca caaatcaagg tgctagtctg aattaaagct tctcttaaaa ggcgtcttta
      601 tgtttataaa atgaatttaa a
//
LOCUS       KCPA01002916             312 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 320390tic ultra-conserved element locus
            uce-4797, sequence.
ACCESSION   KCPA01002916
VERSION     KCPA01002916.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 312)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 312)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="320390tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>312
                     /note="ultra-conserved element locus uce-4797"
BASE COUNT           96 a           64 c           51 g          101 t
ORIGIN      
        1 tttcatggcc tgttccctgt tctcctggaa ttttgtgtca ttatctcctg ttaaaaggat
       61 tcaaatgaca ttatttgcat ggaaacttgc atacaaatga tgtcgtctgt gccacaaagt
      121 tgcattacaa tgaagggaat gatgactgtg tcacatgtac gtgacattct ttgtgtcatt
      181 aaatttaaag tcaatgctgg cagttataaa ccactcacgt ctcaagcaaa tacatcactt
      241 ctgatctgaa atgaatattt taaaatgcca actccaactg catcaaacag caataacctg
      301 caatgtcatc tt
//
LOCUS       KCPA01002917             638 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 320496tic ultra-conserved element locus
            uce-5076, sequence.
ACCESSION   KCPA01002917
VERSION     KCPA01002917.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 638)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 638)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..638
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="320496tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>638
                     /note="ultra-conserved element locus uce-5076"
BASE COUNT          189 a          122 c          119 g          208 t
ORIGIN      
        1 ataacaaaaa tgcattagta aaccagatga atttttgact cagttgtgtc catattacaa
       61 acaaattaat aattactgta ggttacctgt gagtgtgatt aatgttcagt gttgtacttt
      121 ctagtgtgtt ttggcaacgt ggctgagcaa gaacacaatt tcaaattaaa gcaataaatc
      181 atagttagtg aagtaaggta tgcagcccca ctccttagtg tcttgtccca ctacttttgg
      241 cagcaagagc ctctttatca gctactgttc ttccagtcac gcttgtgttc acgtctttgc
      301 tacatgctct gctgattacc ttggaaaagg gcaatgctgt aactgttcca ctgacctttc
      361 agtttatttt ctctggtgta atatgaaaca tgagctaacg cagccttagt ctactgattt
      421 cgtctgtcgc tgcgtttctg cagctttctg ctcagatatg atggggtttc tctgtagtca
      481 cattaattcc agaagctcca tcaacttatc atcacaacag tgaagcaaat tatttagtgt
      541 acaattcatg cataataaag actacttagc agaggaatag tgagacaatg tattaaatga
      601 agaaaaaata aatgaagttc atctccttac atgcagag
//
LOCUS       KCPA01002918             670 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 320607tic ultra-conserved element locus
            uce-2178, sequence.
ACCESSION   KCPA01002918
VERSION     KCPA01002918.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 670)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 670)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..670
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="320607tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>670
                     /note="ultra-conserved element locus uce-2178"
BASE COUNT          190 a          131 c          133 g          216 t
ORIGIN      
        1 gggtatctca gcctgtccct ggagcttgcc gtagagccag gtgcaaaaca gatgagagca
       61 cctcttgcag ctccgaaatg gttaaatggg ttaaatctta tttatctgaa tagaatttgg
      121 gtttagcaga atgctccagc acaaatacct gtggctcact ttgacgttac aatttttttg
      181 ttggtttctt tacttataaa tacttgaact gttagacctt ttactttttt ctctgagaaa
      241 gatgtatttg taccagatta gaaaagctaa actgtttctt tacattgaat aatcagcctg
      301 tcatgacaaa tctatctact tctgcatgag taggtgccag tttgactagc ttcttttagg
      361 ctcacactgg gttttaagct ggatccgtgt gcatgactgg cagtgcattt gttggaccag
      421 atctaaggag ccagagagcg ttcagctcct ttttgcctac aaaagagcag ccagacaacc
      481 agcaagaggc cttggatgta gcacaaggtg atacttactt agtcagccat tctttttttc
      541 aaatataaga gtttttcagt ttcacaatga cacaaggaat taaattatca gtggattgtt
      601 cttctacagc caccattctc aaaacagaaa tactgtacca agtgaattgt atgtttttca
      661 gaacaacata
//
LOCUS       KCPA01002919             522 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 320713tic ultra-conserved element locus
            uce-2526, sequence.
ACCESSION   KCPA01002919
VERSION     KCPA01002919.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 522)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 522)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="320713tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>522
                     /note="ultra-conserved element locus uce-2526"
BASE COUNT          157 a           93 c           99 g          173 t
ORIGIN      
        1 tatagctgtt gctgaggagt gcttgacttg tcatgaaatt tctgcagcaa acacatctag
       61 tcagctaaaa ttgctcatta aagaagtagg agcagaagaa atgcattttc caaattgaat
      121 gctagattta cagtctgttt aatactggcg acctctcgca cactaatgtt cagttcgagt
      181 catcagctgt cccttcaggt cttttatcac tgcttttgtc aagctatcta tttaattgaa
      241 agaagttaat tgaatgaaaa tgatcaacta agcttgtatt aatattgcta atggaacttt
      301 cttcttggcc atgtttggag aaagatgtca tgctagactt taggaaaggc ccattaaggc
      361 ttgcacttaa cctgatgggc taattaagga atgcttattc attctacaag tctaaggtag
      421 cctctatcca gcctattctg cctgatttta caacacattt cacttatgag cataagcatt
      481 aatagcagtg agagtaactg ataatgtttt gattgcattg aa
//
LOCUS       KCPA01002920             845 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 320829tic ultra-conserved element locus
            uce-1910, sequence.
ACCESSION   KCPA01002920
VERSION     KCPA01002920.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 845)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 845)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..845
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="320829tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>845
                     /note="ultra-conserved element locus uce-1910"
BASE COUNT          243 a          202 c          197 g          203 t
ORIGIN      
        1 tcctaaagcc gtgtttccaa ggataaaatc ttacttgcaa agatccttat tacatgtgcg
       61 tacccttaag ctgctgagat gacaccacca cttacaggtg gtggagtgaa agcaagcaaa
      121 agcaccaaac ccctaaagtc tcaagtcact gcaatcatct tcaactccca aattgtcctg
      181 gaaggagaat agcatcggat ttgtcttagg ctgtttggcc aaactggggc acagatggga
      241 taatgacttt tacaaacagc attttgatga gaggagggga gaaggaatca tatgtaaaat
      301 gcacaaaggc tgcataaaca cactgatgcc tgcagctgga acaaactaaa aagatgttta
      361 ataatttaga accaagcagg cagggcctgt gcagctgttg tgtgcagggg accatgaaag
      421 tcttccattt gacagctggc tccatctttc cccagttgct acgtgaagaa gcgaatgcag
      481 atttgggatt agccaatccc tgttacccct gcccatctgc caccaagacc cccagctccg
      541 gctcctctcg ccggagaagc acagacataa aaaagtccac actctcccaa acatatgtat
      601 gcatcaggat cagccgtcag ccgttccgag gatctgttga catgccgcca gtacatggct
      661 gctgtcgttt ttgctgcagg gcacattttg catttcacac atttgcagaa atacaaaatg
      721 ctgttggatg caaacaattc agggcctaat tggctgaatt acttcaatgt taccttgtgt
      781 cccccacctg attaacatag ctcagctggg agggctagga gcagagaggg atttggaggg
      841 caggt
//
LOCUS       KCPA01002921             667 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 320938tic ultra-conserved element locus
            uce-208, sequence.
ACCESSION   KCPA01002921
VERSION     KCPA01002921.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 667)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 667)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..667
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="320938tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>667
                     /note="ultra-conserved element locus uce-208"
BASE COUNT          189 a          163 c          133 g          182 t
ORIGIN      
        1 tcaataggtc cactgtttgg ctcaccagag ctgaccaccc acttttatga gaatctgcag
       61 tgaattagaa aatctgtcat tgctggagga gccggacagc taggatacag cctgtcattc
      121 cttccataca atacacaccc tttgtccgct atctcttaaa ctaacctgac ataactcagc
      181 ctcccagtca atggcatctt tattctctcc caaggaatgc ttcgttcacc agtgttatta
      241 agaaatttct ggacaatgtt tagtggctgc gcaatcatcc aaggttctat taaaaagcca
      301 tctgggtaat taatagcaca tttgttctca gcctcctccc aatttgtcca ttagtggaat
      361 aaaagcacag gacaaagggt aatgtggttc agttatattt tacaagaatt cttcaggaag
      421 ttgaaaacac atgatagttt tccaaagata catatgttta tgggagagat gcaagactgc
      481 acaagccaga ggatctcaac caggcttctc ccctgtcact ggcagatcag ccagtgactg
      541 tgggctgccc tgtgctcatg tctccagcct gagatgggga gggtttggga atcatctcct
      601 tcatctcaat tcaactgcag ctgataaaac gattccaaga tccacgtcag ggcaccacat
      661 caaacac
//
LOCUS       KCPA01002922             367 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 321038tic ultra-conserved element locus
            uce-7002, sequence.
ACCESSION   KCPA01002922
VERSION     KCPA01002922.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 367)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 367)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="321038tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>367
                     /note="ultra-conserved element locus uce-7002"
BASE COUNT          123 a           81 c           50 g          113 t
ORIGIN      
        1 ccaggccaga ttcttcttca gttatcagac ttccccttca ctcctctgct tgtcttctaa
       61 tcaaaggaaa ctactccaac ttttaaatga aactaatttt catattgccc acatatacat
      121 acagttaaga aattacagtg acagtgataa aaaatgttaa tttttctttc cagatgcttg
      181 taaaacagcc ttaacatatg tccgctgttt aattaacaga gcggcagcat ggtggaggga
      241 agccaaacta ataatttaaa gaagcattct ccctcccttg atttgagtcc caaaacacat
      301 ccatcatgtg catttctgaa aatgcaaaag atttaatttt ctgaactttc agcaaacatc
      361 ataaaac
//
LOCUS       KCPA01002923             747 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 321150tic ultra-conserved element locus
            uce-598, sequence.
ACCESSION   KCPA01002923
VERSION     KCPA01002923.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 747)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 747)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..747
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="321150tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>747
                     /note="ultra-conserved element locus uce-598"
BASE COUNT          239 a          151 c          126 g          231 t
ORIGIN      
        1 aagcacactc acaaaacgcc ctcaccaatg atccttttac tctgcttaaa cctgacgagt
       61 gacaaatgca gagattctct ctgtagccgc ccccatgata acagatgaca agatgcagca
      121 caagcttcat ctcttgctaa ttaaacgaat caattaagag actattgttg caactgtgta
      181 actgctgttc tatagtggca ataacaaccc cacggggagg tcttttacta cattaaaatg
      241 ctgtcctcca caactccatt tgatattatt agaaacagtt atttgcgtct tgctgtcata
      301 ttagtagcga aggcaaatta tggaaatatg cagaccagaa tggtcccagt atgagatcag
      361 gtttggtttt caacctccaa gggaacaatc gctgaaattc caaagttccc taaagttctt
      421 taatggaact gataaatcta tcagcacagc atccatttag attctaggta agggtcacat
      481 atttgcatac tttcctgcta agctgataca attcaactag ataaattatc atattaagtt
      541 taccctcctg agttaaactg atggagttca aaattgtttt cgatggttgt cattaatcgc
      601 tgttacatcc taaatgctca ctttgaaatc taattgtgct ggtgtaccaa gggtcatatt
      661 aatagcattt ttaatgttaa atctttgtaa aacatgttta ttttactgat attaccactg
      721 aagcctagaa gactaatgag aaacaaa
//
LOCUS       KCPA01002924             676 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 321258tic ultra-conserved element locus
            uce-4956, sequence.
ACCESSION   KCPA01002924
VERSION     KCPA01002924.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 676)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 676)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..676
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="321258tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>676
                     /note="ultra-conserved element locus uce-4956"
BASE COUNT          201 a          100 c          141 g          234 t
ORIGIN      
        1 aattcagtct taaatttcat agaactaaat ttaatggtga gcacaatcac actttgtggt
       61 gattgttttc agtgttgctt tattaagtta tgtaatggca ggggttcaaa ctgcagagat
      121 ttttgaaatg gtagatttag ggactatgtt agaatgcttg tcagtaacaa gttttcaaag
      181 cgcagaccta gatattgctg tagcttgtga tttttattta agtagtttgg agtttttaga
      241 cttaataccc tacttttaaa aaatgtttta aaatcttgtt ttattcccca aagatttgtt
      301 ttctgctgtt gcgattacat gatgacagct agctggcttt taaaattgat caggaagtat
      361 tttggcagtc attcagtgtt gtaatagcac tttaatggat atgagctatt cacccagatc
      421 agactcaatg tcaaaacagg cgaaaataca gctgtcactc tggacaagaa gctgcatata
      481 tgcaagcagc tgctaataat actggaaggg aagccttata aaatgcttta aaggtgcata
      541 ttatatgcat gcatactgct tctacatgtg tagacatccc agagacctta gtttctggtc
      601 atgggtgtgc ttagagaaat gaaatatatc ctctgacctt tgaggaagtt gtgataagtt
      661 cattatgtgc tgatgg
//
LOCUS       KCPA01002925             613 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 321354tic ultra-conserved element locus
            uce-6324, sequence.
ACCESSION   KCPA01002925
VERSION     KCPA01002925.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 613)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 613)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..613
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="321354tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>613
                     /note="ultra-conserved element locus uce-6324"
BASE COUNT          171 a          161 c          124 g          157 t
ORIGIN      
        1 tggagatcgg aaattctgca gaggaccgcc aaatggtgtt accaccacat ctactgccaa
       61 gaaaacctca ccctacccct ctgcatgtgg ttctcaccca tacaatcagc tggtgtctcc
      121 ttgcctctgt ttatactaaa gcccttgtag aataaaacat ccatgtaaaa tccaatttcc
      181 tctgaatctc tctctgagaa gaggcctcga gattgagtag ataacctctg cagtaattgc
      241 ctgaaccact cctgtttgct ggaaaggtga gatccatttt tcaattatct atctgcagtg
      301 acagcagcga gcaacggagc taagaggaag agagaggaaa tccagccaac aagagccgtc
      361 tgtgtcaatc ctggcaaacg ggaggtacga tagatgtggt cacagttcct gccatcaata
      421 tcctctaata taaatgtcag cgatgccatt ttacccacag tcatttccca caatgctgat
      481 tacattatcg tataatagag gggcgccagc cgcaccgctt tctctcctaa ccctccttgc
      541 ggtaatgtgt caatagcctg cctccatgaa acaagtcaat tttctgcagg cttggcagcg
      601 gaataaatct acc
//
LOCUS       KCPA01002926             655 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 321461tic ultra-conserved element locus
            uce-2710, sequence.
ACCESSION   KCPA01002926
VERSION     KCPA01002926.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 655)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 655)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..655
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="321461tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>655
                     /note="ultra-conserved element locus uce-2710"
BASE COUNT          207 a          113 c          116 g          219 t
ORIGIN      
        1 aacatttaaa actctgtatt tctttatttt atcaccctgc agttccctct ttctaatttt
       61 tgccaatgat aattttcatg aagaagcagg aaggttagag ttgtttgaac tgataacaat
      121 ttacacactt ctgccacagc agtgaaagaa ggatctgtcc ttcagtctgt tcatggtata
      181 gttacgaaaa gtataaacag tgaattcctg agcttgctgt gagatggaag gtcattaaca
      241 gggcacttga gcagattggt attactgtca attgagacgc tgaaacatcc taaatggcct
      301 aatgcagcaa ctaagtgctt cttaaattcc agaactttta cttgagcaga gtattcatgt
      361 ctaaagtgaa tttccatttc ctttagtaaa tgctgttttt atatagtcat agttgaagag
      421 gcaacatagt gtaaacacag cagtttgata atatctccac agcagcacta aactaatttg
      481 tcaagttata aacatgaaat ctgagtctct gtattttcca cattgaatta atagaaatgg
      541 caggagtttg tgtgttaata tatacatgca ctgtcaatat agccctgtca gattaatcag
      601 catgcaaaca ggaatggttt catcctttag gttttatcat tatccaatca attta
//
LOCUS       KCPA01002927             792 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 321570tic ultra-conserved element locus
            uce-6396, sequence.
ACCESSION   KCPA01002927
VERSION     KCPA01002927.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 792)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 792)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..792
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="321570tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>792
                     /note="ultra-conserved element locus uce-6396"
BASE COUNT          224 a          157 c          154 g          257 t
ORIGIN      
        1 tttaatttca gaaagtgtaa acattgccaa gttttgaagg tctgaaccaa ggatactgac
       61 ataattttca aaggcatggg taatacctca gcacctccct tcaacataaa acccagaggt
      121 ctgacacaag caaacctctc tataatccac ttcatgcata acatttctgt ctcacatcct
      181 tcctgattat ttgtgaatcc acacagtgtt ttgcatatga ggttcaggtg atgtatttta
      241 ttgctgatac tgtttcacct gtgtttagtt ccagtgacat ggaaaacact gcagccaatt
      301 gtccttatta cattccctgt gtatttctcc ccagtgcact tgcacagggg aaagatgtga
      361 gcatggagtg tacttaactg ccaggctgaa tggctctgta atgtagcttc agcatggcat
      421 aaattaaact gtcatttttt tggcagcaag tgcagagagg cgattttcct gtactgtaac
      481 atttgaaaca acaattttgt ggctccagga gtagctgaca gttctgtgtg atacatgctc
      541 aacatttgtg cttcaggggc tgcagctggc ctttggggta aggtattgtc tttattatca
      601 aattgagctt gcagtcacag aacactaata tttcctaagt gtttttgaag accctgaaaa
      661 aattgtactt aaaatttact agattccata aaggtattta attgagttgc ttatatgcaa
      721 aaccctattt ttgataatta cttcagacct attttcatta ggaagattgc ttacccagaa
      781 ggagctggcc ac
//
LOCUS       KCPA01002928             725 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 321683tic ultra-conserved element locus
            uce-7637, sequence.
ACCESSION   KCPA01002928
VERSION     KCPA01002928.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 725)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 725)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..725
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="321683tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>725
                     /note="ultra-conserved element locus uce-7637"
BASE COUNT          178 a          176 c          165 g          206 t
ORIGIN      
        1 gggaagatga tagggaaaag caagggtttg attggcatgc agtgattttg gactagcagg
       61 aagcaggcag ctctgctctc cagcccccac atacttctca gtccatgtgc gttgagaggg
      121 gaaagaaacc gatattgttc cctctaaaat taattcccag ttagccagtt attcctggtt
      181 tttagctcag agcacactgt aattgcattt ttcatttcag taattataga ggatattaaa
      241 gtggatagac agttgtagca atctggctct ttagacgtat ccacttgtcc aagatcaaat
      301 ggctgcagca tattcagggt tacagtctcc ttcttttcct tcttgttctc tactgcagag
      361 gatcggtgtt accatgacaa cactatatct ggctgccagc tctgtcgtaa gttattgaac
      421 tgagactggc ttttggttta gcagataatt aggttctgtc tcacaggttc attttcctgc
      481 gactgggaca tgaatatgac ctacagctgg cctcaatttc agtgtcacag acaaaacttt
      541 aacccttcct agtcccacca ctactgtacc cacgttggcg acaattccaa accctttggg
      601 gcgctggaca cagcacaccc tcccggtcct cagggctcgt tgcccaggct ctgttaatgc
      661 ccagaggaca gtccagcttg cacccccatg ccggccgggc ggggaaaggg taaattatat
      721 tgatt
//
LOCUS       KCPA01002929             742 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 321788tic ultra-conserved element locus
            uce-5598, sequence.
ACCESSION   KCPA01002929
VERSION     KCPA01002929.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 742)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 742)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..742
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="321788tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>742
                     /note="ultra-conserved element locus uce-5598"
BASE COUNT          203 a          151 c          160 g          228 t
ORIGIN      
        1 tttttagcta taagaaccag cttgttgcca atttccgtca ccccaagtta agtcctggtc
       61 ctattgaaat cattgtccga atgctcattg gctgtgaggg gagatcagga tttgtcccgt
      121 tcaattcatt agtgatggta tgaaccccaa gtagtattat gcttccagag aagctcctac
      181 ttactgttta tatacgaatg ttatttctca cacgtttatt gtgttacttt ccttaatttg
      241 atgccatgct gggtccctgt gggatgccac tcaaacatta tgtcaatgtt ctcaaaattg
      301 aactccagtg ctttatttta caaatggctt ctagcagatg tgtggcacac tttattaact
      361 taagtaccca ttagttgaaa atttcattag tttgggggaa agggatcagt ttcatcaata
      421 gatctggtat gggtggaccc tttgtgtcaa cctgacccat atcaaaacgg attattgttg
      481 taagtgagac aagcgaccta atgttctgcc tattatgcac acatgatcta taacctttta
      541 aaatactagt gtgggaaagg agcacacttc agtgcgtccc caaaccatgg attcttaaca
      601 ggtggcagtc cctctcttag caacgtttgc tatgggctgt ctgcgccagc gtatgaatta
      661 tcagggggta cagtttccaa ccaggtaacc aggggaaaac tgggatggag aatgaaacca
      721 gaataatgaa cggccaagca ga
//
LOCUS       KCPA01002930             510 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 321895tic ultra-conserved element locus
            uce-3832, sequence.
ACCESSION   KCPA01002930
VERSION     KCPA01002930.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 510)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 510)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="321895tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>510
                     /note="ultra-conserved element locus uce-3832"
BASE COUNT          151 a          100 c           88 g          171 t
ORIGIN      
        1 tgaatcaata gtcctgcaac aaaaatgtgt aactgatatt tgcattgctg ctaaaaatgc
       61 ttctcagtaa acttgttttc gtaagaagtt tgcccattca tatgtcccag agctgttgta
      121 atcttcattg ctaatgctga tctaagagca tggacattat tttatttctt gacacattta
      181 aagttctcta atgaataaag caaacagctt atggctgctt ggactgtcac tcgattgccc
      241 tggagggttt taatgtcttt aaaataggcc tcttagtttg tatttaacta ccttgcccac
      301 agaggtctga ggggtagagc agatcaaaga tgtaaaaagc agctgtcctt catttacctt
      361 taattagcta catctgacca gattctttat ggtctctttg tcacacattc aacagtctat
      421 aagccttctg acctgtcctt aaggactcta ccaaagagtt tcaacaaaat aaaacaaata
      481 tgagatacag atctttgtat ttggtctcac
//
LOCUS       KCPA01002931             686 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 322004tic ultra-conserved element locus
            uce-5797, sequence.
ACCESSION   KCPA01002931
VERSION     KCPA01002931.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 686)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 686)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..686
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="322004tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>686
                     /note="ultra-conserved element locus uce-5797"
BASE COUNT          197 a          159 c          168 g          162 t
ORIGIN      
        1 ggatgcactt gacagagcat aatatatcac ctgtcgagag accccagcct tttactggta
       61 taattgcagg gtaaacactt gtctgggctg ttccccccgg ctccgagaca ccataactga
      121 ttgctctagt accaaagtga caccaaaggg ggtcaagtaa ataaatatgc atgtctcacc
      181 agtgcaaaat aataaaattc caatgtgtgc aagcctgctt gttgaacata tgtttgcagc
      241 acggctaagc catctggctc aatgtcaagc atttacacca actgcagtct tacactacct
      301 gacagcagaa aagctttatt cccctggtgt ttgggcacaa atggagaaat attattgaaa
      361 tgattatctg catcaagact cagatttggt ttgacattta gctggctctg tttaatccaa
      421 agggttgtct gaatgaataa agagaagggt tcctccagaa gatgctgcga gcagccaggg
      481 aaagccaaat gattaatgag actgagaggc tgggtggacc ctgcccacct ccacccagac
      541 ctcggtgcca agaactgcat gggaaatcag gctgaggctc ctggagcttg tcaggaggat
      601 gctctcggcc gactctgttt tgggacccga ggaaaacaag agcaatgagc acgttgctcc
      661 caggcaggaa ggaaaggtcc atgtcc
//
LOCUS       KCPA01002932             602 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 322114tic ultra-conserved element locus
            uce-4851, sequence.
ACCESSION   KCPA01002932
VERSION     KCPA01002932.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 602)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 602)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..602
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="322114tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>602
                     /note="ultra-conserved element locus uce-4851"
BASE COUNT          164 a          121 c          157 g          160 t
ORIGIN      
        1 cagaatctcc taaagcagtt cagagtgacc gatccgtggg cagggagaaa cagaccagag
       61 gagttggttt attcacgagc gttaatgacc gacccagcct tgttctgcca ctcacccaga
      121 tggctgttga taaagattta gcatcatgtt ccgagtgtca gggctgtcag tagtgctgaa
      181 ccatttgacc agaagaaaaa acgcacaggg agctattgat tacagcttct cagtgtcact
      241 tgttcaccag gatttaggta ttgatgaggc tgcgagtgaa aacaagctct ttcccttgtg
      301 ggcctctacc cagaagaacg aaatattcag ctggtgcccg aatcagaggg actccggcat
      361 cgatccgagg gctccttcat gttaaaatct ctgggtttgg aagttttata gcgtttgagg
      421 taggggcgtg tgatggattc gtggaggaga ggaattagat ttcacagcgt gaagatttca
      481 gcggcgctat aatattatga gctgcttggt tattgataaa aattacatta aatgtagctg
      541 aggcattaaa gctccagact agggtagttc tccctctaaa atgtccttag ggccctaata
      601 aa
//
LOCUS       KCPA01002933             634 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 322221tic ultra-conserved element locus
            uce-681, sequence.
ACCESSION   KCPA01002933
VERSION     KCPA01002933.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 634)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 634)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="322221tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>634
                     /note="ultra-conserved element locus uce-681"
BASE COUNT          204 a          117 c          117 g          196 t
ORIGIN      
        1 gaaagtagaa gtactgtcca ctagaacaca ctttgtgcct tatcatggtt ttgctccctg
       61 ggaacagtaa ttgtttagct tgtttcctcc attgtctcag tgattactgg aatcacattt
      121 ctagggtaaa caaggggctc tttcccactg tcccattttc tgtcagaaag gtttgaagca
      181 aagtaggcct cccaataagt tttctaatcc agataagcag ggctaagata tctgacagct
      241 gtttcacgct cttcatcatc atctgaaaca atcagtacgc attagagagt acttttccct
      301 ttacaaaggt gataattaga taacaagctg agattaaagt aattacagtt agacagctgg
      361 caaggcagca cagtcatgtt gaaatattgt tgatacttca gcatctggtt ctaataacag
      421 cacaggctaa aagattttac attaattaca gaacataatt taatataaac atatttaatt
      481 acaattgatg agcgataaac tgttcaagaa tgacttaacc ccttacacat gtcaaaatga
      541 ttggaacttc ctttctactt taggagcagg ctactgaaag gttaggaatc tccaattttt
      601 agaaagtgct gtaactggaa aggtgaatta ttga
//
LOCUS       KCPA01002934             634 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 322331tic ultra-conserved element locus
            uce-2377, sequence.
ACCESSION   KCPA01002934
VERSION     KCPA01002934.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 634)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 634)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="322331tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>634
                     /note="ultra-conserved element locus uce-2377"
BASE COUNT          165 a          127 c          159 g          183 t
ORIGIN      
        1 tacttgatag cagggtatca tttatgaatg attttgcaga tctctgcctc aattctgtac
       61 ttcacaaaaa taattggaag ctgagctgac tttattgaat gtgagaattt aaatgaagat
      121 ccgagtgtgg gagtgaggac atgtgttgtc atgttggtga cagtgtctga gagtgttggg
      181 gttgtgaagt gaggtgtacg atagtaattt ggatttaaat atgccagagg cccagattaa
      241 acgcatttcc aggctgatct cttgatacag tgtaaagatc atctctgagt cccacactta
      301 tgacaggttc aagggcctca agccgactgt tatccttctc tcccgaggaa tttccgacgc
      361 tgaaagcagc tggcgagcag gacaaggttg gcaaagaaaa gggcgcctta gatccgtcgt
      421 atgggccagg accaagcctc cgcccccaga gtgagtgaag gattgtgtct ttctgccttc
      481 tgggggtgcc agttcacagt agtaccaaga gctccatcct tacatttcct ctttttacat
      541 gtgtcaggct gtttagcaga tgatcacaga ttggcatctg tggtccagac aaccaatcat
      601 ctactacact gtttaataaa aattgctgtg tgat
//
LOCUS       KCPA01002935             584 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 322442tic ultra-conserved element locus
            uce-4082, sequence.
ACCESSION   KCPA01002935
VERSION     KCPA01002935.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 584)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 584)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..584
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="322442tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>584
                     /note="ultra-conserved element locus uce-4082"
BASE COUNT          171 a          136 c          119 g          158 t
ORIGIN      
        1 tgccatccag aggattccgc tctggctccc tgcttggccc aactatttga tattcggatg
       61 ctttgcccct tcttccattg ctaggacaag gttacacaaa gtctgcagct ctgcgaaaac
      121 aggttcctct ggaagctgca actctgacag acttcgtaca cagcaaggca cccgtgacat
      181 cctggcgtct gccagctcca ttcttgcttg attagctctt ggttacctca gtgataatgt
      241 ctggaggcac tgattaatgc acaataatgg tacatctcac tggaaagata agcttataga
      301 agatcaatta aacagtggca atttcacagc tacaagctgg aagaaggtac ctgcagcctt
      361 ttctctcttt tgcttgctct agaatttaaa acacagaaac accctgaaaa cgaaaggtga
      421 tggtacccat taaaattaca agggaaaatg aatatgaatc aaggcccctg aacattcctt
      481 cagctgtcag aaggttccga attctgcttt gatgataaga caagaagttt tcaaatgcaa
      541 acttgccata aatggtacat aggagaatgc cattgtttca tgca
//
LOCUS       KCPA01002936             559 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 322550tic ultra-conserved element locus
            uce-3909, sequence.
ACCESSION   KCPA01002936
VERSION     KCPA01002936.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 559)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 559)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="322550tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>559
                     /note="ultra-conserved element locus uce-3909"
BASE COUNT          170 a          119 c          123 g          147 t
ORIGIN      
        1 aaaacaagcc cttcagcaat agcacaggaa actgcattaa caacatttaa gcaaagtgtt
       61 gaaaacacac tgaaataaac actggagcac ttcaggggtt gataggaata tgcatcaaaa
      121 tgcttggcat ttaatctttc ttcgggaatt tagccagtga aatatagctg ccagtgtctc
      181 aggcctgcgt gtgttcttct gcaatatgct cttgatcaat cagatttgca taactaaact
      241 gtcggcaagc ccgctcggct gcccaggtgc agggccattt gcatatagaa cagtgaggag
      301 gtcccaagag tcacttcaga ctccagtgac tgctgagccc gcagtccaca ccgcactgga
      361 aatgaaattg gaatgacaaa aaaatggttg tgctagtctg caagggtgaa atatgcactt
      421 gtgtttcaaa ggttatgtag agatcacaag acagcattca ggcacgagat tatgcacaag
      481 cctccaggaa agtaaatgct gttgtatgtg ttttgtttcc cttcccccag ccacaaggat
      541 acatatttat ttattttta
//
LOCUS       KCPA01002937             625 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 322769tic ultra-conserved element locus
            uce-7898, sequence.
ACCESSION   KCPA01002937
VERSION     KCPA01002937.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 625)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 625)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..625
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="322769tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>625
                     /note="ultra-conserved element locus uce-7898"
BASE COUNT          189 a           99 c          118 g          219 t
ORIGIN      
        1 tgcttctctc tttcatagat acaacactgt ttgaaaatgc attatttcac gcagagggtg
       61 tctataagtg agtcaatatg gtatagtaca tcaagttaaa gagttgtttt agacattttg
      121 tttcagttaa aatccagatt tactggattg ttttgaagtc tgaaaaccca gtctctgcca
      181 cttgtgctct aaggaatatg tggacattag cataaaggtt gcacatgtta tacaaagtgt
      241 aattaaagaa gctttgatcc cccaaatgtc aactagcttg ctaagtgtca taacaaagtg
      301 tcaagcatct ggtatacagt taatttgtag tcattaactg catattgttg atgtgacagt
      361 ttgttagcaa agcaagcttg acagtttgca ttttgttatt gattgacacc tatagacctc
      421 cccacccatc tagtttacat tctttatgag ggttactcag gttgcacttc tacttttaac
      481 taattagttt agttagttgg ttaaaataga gtgaaatagt gagcccagga actataattc
      541 agtgtttcga ttgaatgtac agattagcaa acagttttaa aaatgtgctt tgaatattat
      601 tggtaatcta cgacttgggt tacca
//
LOCUS       KCPA01002938             666 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 322880tic ultra-conserved element locus
            uce-2, sequence.
ACCESSION   KCPA01002938
VERSION     KCPA01002938.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 666)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 666)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="322880tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>666
                     /note="ultra-conserved element locus uce-2"
BASE COUNT          205 a          109 c          127 g          225 t
ORIGIN      
        1 taagctgcta agatttgcct gtgaactgaa gttttaacaa aacagtttgt aggtgttccc
       61 tctgaaccca atatcctcag ttcgtgcatt tgcatgtgtg tgtgcatgca cagatttttt
      121 agtccttaca ctgtaaactt tggaattgtt tgaccctgta aacacaaaat tcatgtctct
      181 caccctggga caaatacatt ctttttaaaa gcagcatatg ggcagccttg gactgatgtt
      241 agtttattgt cactgcttga taacgtttaa tggaaaagat acaagagtgc caaagaattt
      301 taattatttt tgtgataaag ttatatgttc ggccttgaaa aagtggagat aatgctggga
      361 ttcattatta ttcccagtgt gtttaaacag acgacacaga atgcaaacaa aagcagatga
      421 aatttgaaaa gtattatcaa tattgcagat agcagatgcc ctttccaatc agaacaagca
      481 tatcttctat agcaacttta tggttgagta gtttattcat ttctattaga aggttgtacg
      541 tttctaaaat atgtagatgg tatctagaaa accaaccaac cagtagggtc attttgcttg
      601 ttttcctaaa tttattattt cacttttgca ggcttgatct gaggtgcatt aacatgggag
      661 cgaaat
//
LOCUS       KCPA01002939             540 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 322980tic ultra-conserved element locus
            uce-4619, sequence.
ACCESSION   KCPA01002939
VERSION     KCPA01002939.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 540)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 540)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="322980tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>540
                     /note="ultra-conserved element locus uce-4619"
BASE COUNT          158 a          105 c          132 g          145 t
ORIGIN      
        1 ggggggcctc agtccttgtg tctccttttg ccttgttgtg ctggccaggc tcctttgttt
       61 atacagcccc cattcgacct tttaaattgc tgttaatgtt ttagcgtaac gaattagtct
      121 ctcatcacga atcaggactc gaaataaaaa aaaaaaaagg agagaaaaaa aaaaccctcc
      181 gaggccaact tcctgaaatt ggggtcattc tcatttgcaa ggcagagaat ctgagaacct
      241 taatgcaagg aaatttattc aaaggcagag ccccggcgtg attaggccct ttgtaattat
      301 agctcggaga gattccactc cagcctcctg cctccctcat ggattagcaa gtgagtcgga
      361 aaaatacaca ggatttaatt agaggcaaat taaaattggt aatgaaatag gggcagtagc
      421 aaatggcagg gagttggaag gggaaaaggg agctggtatc tctcggggct gcgctgtctg
      481 cctacgtgtg tgtctcttta ttttacattt agaaatgtaa agatggtcga tgtaaagaag
//
LOCUS       KCPA01002940             544 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 323087tic ultra-conserved element locus
            uce-2828, sequence.
ACCESSION   KCPA01002940
VERSION     KCPA01002940.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 544)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 544)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..544
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="323087tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>544
                     /note="ultra-conserved element locus uce-2828"
BASE COUNT          182 a           98 c           83 g          181 t
ORIGIN      
        1 aaactgcttg acaaatattt cattgttcca atgcagctca ctgctgccac ttgtttggaa
       61 aaatgaaaag taagttgaaa aatgcacctt ttccattttc atctctaatt gaattctctc
      121 ttgaccccct tattccccat ggctgtattt caggttttga tgataagaaa aagaattttg
      181 tatttggata atacaatttt ctcacttgcc ttcagcgacc ttcagctcaa tttcctctcc
      241 ccagagacac tgtacattat agaattgaat caaattcctt attcatagaa aaaaagttcc
      301 aatttaatct gaatattcag cattttacac tggtcagggt gatggatggc aaattgaaat
      361 gcttttggtt caggtaatca aatggtagaa ttcagacttg tattgaaaaa aataatgaag
      421 tctattcaat attctcataa ggtgcaaaaa atgcacatta catggtagaa ctgggtctta
      481 ttatctaacc aataacatct ccaccgcaaa aagtatagta aaacattaag aatttatgta
      541 ggtt
//
LOCUS       KCPA01002941             392 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 323192tic ultra-conserved element locus
            uce-2025, sequence.
ACCESSION   KCPA01002941
VERSION     KCPA01002941.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 392)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 392)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="323192tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>392
                     /note="ultra-conserved element locus uce-2025"
BASE COUNT          163 a           69 c           45 g          115 t
ORIGIN      
        1 gaaagctaca aagaagagat tgatgtaaga caaatgcaca aaacactttc attttcttta
       61 ttttcaattg atactgtatg aatacaaagt ttctagaaag ctacaaaaat tctaccactt
      121 tatcaagaag gcatcaaaat gtgtcacttt gcaaagacat gaaaacacct gcagtaaccg
      181 acacaaaaat agcattttta gagtgatgaa ataattgcac ttaactgtca tggatattaa
      241 agttatcaca catatgtacc gcgaaagcta gaatacattt tttacaaagc actttataaa
      301 aaaattctct gcacacaaaa cctataattt tcatattact atcatactaa agataaattc
      361 actttaaagc caacacttaa aacattttaa ac
//
LOCUS       KCPA01002942             753 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 323298tic ultra-conserved element locus
            uce-3670, sequence.
ACCESSION   KCPA01002942
VERSION     KCPA01002942.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 753)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 753)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..753
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="323298tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>753
                     /note="ultra-conserved element locus uce-3670"
BASE COUNT          197 a          194 c          159 g          203 t
ORIGIN      
        1 agaggaactg gatgccaaat ttcctctgtg tgccaactgg cagctgagct acagctcctc
       61 gaaacaccat tagactgtgt caagttccaa taataaaatt tccaaaaaaa gccctaatga
      121 tggtacagat ctattttaag tctttcaggc atgacctcac cacctctaga agtctgtatt
      181 tccatggatg tggtgttttg tttgcctctt tctcaccctc gacaggagag cagggccatg
      241 tgcgagtgcc gtgcctgatg ttggacaaag ctctgctttc cacagcagcc accttccaaa
      301 aacataactc gctagactaa tgggcagtga gcagccagaa tgactgccct cgtcttctcc
      361 ttgtgtaact ttgccagagt ccttggaact tgccaaattc ggtcatgcct gcttagcttg
      421 ctcgactgat tgtgccagaa aagaaaataa gacacagatg tatttgagct ctttgagatg
      481 ccagtaagag cgacagctaa tggcttcatt tcgaccctcc cctaccagct gggcacaggt
      541 ggggggataa tgaggtccct ctccctaatc aaactcaatt atttactact ctctacagcc
      601 acaaagacat tcacatccag ctcggaatat aaactgcact gtgggctact tccagccacc
      661 acctctgggt atttataact aactcaagtg gctcggagtt tgccttggca ggagtctata
      721 aagttctgca aactgtttct gctcagacat gtc
//
LOCUS       KCPA01002943             475 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 323399tic ultra-conserved element locus
            uce-3137, sequence.
ACCESSION   KCPA01002943
VERSION     KCPA01002943.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 475)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 475)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="323399tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>475
                     /note="ultra-conserved element locus uce-3137"
BASE COUNT          148 a           82 c           85 g          160 t
ORIGIN      
        1 aaagtgacat cttttggttt caaagtgaat tcatggccag aaagaaggaa tgccacactt
       61 acctgatttt cttcctcttc cttctttctt gaaatttttt tctggaagtc attaaaattc
      121 agatcccatc acttttaaca aatgatgtga agtgttaggt acagtacttg gaatatatgt
      181 ttgttaaaat gaaggaagag actcttccaa cactttggga ttttatgaat gatttacatc
      241 tggtgctaaa gttcataaat gaaacgtggg agaaccagat gcttcatttc ttgtctgcat
      301 cgtgtctgca catactgatg gtgaattgaa aacaggaatg tctcataaat caagaaaatc
      361 tatttttgta ctcttgattt ctattctgaa catccatata gcagccaaac aaaactggta
      421 aaattggttc cttgagaaac cctttatgtt tagcaacagc gcggacatgc taatt
//
LOCUS       KCPA01002944             423 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 323506tic ultra-conserved element locus
            uce-5202, sequence.
ACCESSION   KCPA01002944
VERSION     KCPA01002944.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 423)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 423)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="323506tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>423
                     /note="ultra-conserved element locus uce-5202"
BASE COUNT          152 a           74 c           95 g          102 t
ORIGIN      
        1 agaaggatct tcagagcagc aatttaaagt tatggtggct ccccctgtaa taaagaaatg
       61 gtgaaaaaca gcacagagac aaagcaggga tgaaatactg agtcctttgt ttcttgtgtt
      121 tcaacagggc aaagtttagg gtatggattc gttaactaca ttgatccaaa ggatgcagag
      181 aaagccatta acactttaaa tggactcaga ctccagacca aaaccataaa ggtaagccat
      241 ttgctcaatt caggaaaagt agttggaact ggtaatttca tcacggttaa cgagctcctc
      301 cttggaacaa tgagcagaca tgcagaagat gaaatctctt ttctccaaaa ttgcagctat
      361 tgttaaagag agggggaagt aacaggaagc ttaaagcatg acagttagaa taaaacatcc
      421 gga
//
LOCUS       KCPA01002945             564 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 323616tic ultra-conserved element locus
            uce-3300, sequence.
ACCESSION   KCPA01002945
VERSION     KCPA01002945.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 564)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 564)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..564
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="323616tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>564
                     /note="ultra-conserved element locus uce-3300"
BASE COUNT          155 a           99 c          127 g          183 t
ORIGIN      
        1 tgaaggcctc ttgcagtagc atccttaaag ctgggcagca atgctgaagc tctcagattt
       61 ataaatgtat accccactca ccttgtcggt catgttctaa atgccgcagc tgagtcaagt
      121 tgtgtgggat gtggcccttc cgactatcca gtcccacatg accctatgat aaaacaagga
      181 ggtatgactt gatgcaagat tgctgtgccc cgtttctctt ttttcagctt gactcaatgt
      241 tatttatctc tttctaatct gacagggatc gtttacagtt aagataactg atcagaagga
      301 tatgatgata agaggtggaa tagttctgtt tggaattaaa ctctgtaacc agtagactca
      361 aacacaaaca agctaaaatg gtgattaacg atgcatgtat gttttttcat atagtcaata
      421 gacctccgtg tgcatttatt acagtaatga agtggtgttg atagctaaac tgtgtgcttt
      481 tatttaattg aaagagctgt agtgaaagtt tttaattttg gttttgttgt tgaggagtga
      541 ctttgccatg gggagcaaag ggcc
//
LOCUS       KCPA01002946             627 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 323724tic ultra-conserved element locus
            uce-5, sequence.
ACCESSION   KCPA01002946
VERSION     KCPA01002946.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 627)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 627)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="323724tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>627
                     /note="ultra-conserved element locus uce-5"
BASE COUNT          186 a          129 c          136 g          176 t
ORIGIN      
        1 aaataagcca ggtgtcaaga caggaaacat ataagaataa ggacaagttt ctgaaaaata
       61 aaacacaatt gttttctact ttatgatatt tccacttcta tgttctattc cccttgtaca
      121 gagtgtcccc ttgggaagtg gggcccaaga gccctttcta ggatgggaca ggatattaca
      181 gcttggtttg tgcaccagca tccttaatat ttccttcctt tcagaagcaa atagagcgta
      241 cccttatctg aatgctaatt tcctagttaa aaccctccct tgctgacaag ggactgaaag
      301 agttttaaat cacagatgta gagtatcaaa tgcaataatg ctcttgcaat agtgcattga
      361 agcctcaatt aattaaccct tgggctaagt aggcaggtac atggtggtgg ccacaggcgg
      421 tggatggatg agatttaaat gggcatctca tttcctcagc acggaacatg ccgtttggtt
      481 cagaaaggag tcattttaca cactcgcctc atttacgctc agctttaatc cctttaattc
      541 cacctgagat ccaagcaaga atgggaaaag agagagaggt gcaaaaggct acagagctgg
      601 gctttgttta catatgtttc cccaggg
//
LOCUS       KCPA01002947             523 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 323830tic ultra-conserved element locus
            uce-2736, sequence.
ACCESSION   KCPA01002947
VERSION     KCPA01002947.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 523)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 523)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="323830tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>523
                     /note="ultra-conserved element locus uce-2736"
BASE COUNT          198 a           67 c           84 g          174 t
ORIGIN      
        1 ccccattgta aatagatcaa ttgccagcat tatgtaacat aaagaaagag agttttttca
       61 taataaaata aaacgagtgc ataaacaaga ccagaaaaga gctctgagtg tttacagaaa
      121 taaaaataaa tgagtgtgtt ttttgaatta atattttcaa atgttcaggt tgaattaatt
      181 tgagaaatat gaatatgtat tggtagtgtt aattctttgg ggttttgaaa attcttacaa
      241 ccacataatt aaatgagtgc ctttagaaat actgataaaa cccattgcca ttcaaatatc
      301 catacaagac aacaggggct gtaagctgta ggctttagag attagtttgg ccatgggcca
      361 gtatttatca caacatttcc atcttagaag ataaaattta atcattttta tttaaatata
      421 aatcaaaatt aatgcaggtt taaaaaaaag gagtctataa cctaatcaca atatctttat
      481 tttagagatg tttgcctcta ttgtttgtat tcaaaggagc aat
//
LOCUS       KCPA01002948             682 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 323940tic ultra-conserved element locus
            uce-7095, sequence.
ACCESSION   KCPA01002948
VERSION     KCPA01002948.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 682)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 682)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..682
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="323940tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>682
                     /note="ultra-conserved element locus uce-7095"
BASE COUNT          222 a          148 c          118 g          194 t
ORIGIN      
        1 cacattaagc agttccaagt gctatgattt ctacataata ttgcaatttt atatttatta
       61 tgccatctgt cacaagaaag aacagatata gaacagtggc aaaatcatgt taaaaagact
      121 gtcttgggat aacaaagaga aaagttaatg aacatggatt tacaaattat taatgatttt
      181 tcttgtcatt tcttgaaaaa tgaaagctat gcacgctgtc tctttcccca aacagattgc
      241 attttattcc tctgcagttt gtccatcagg cttcactctg acaacataat ccaaaactaa
      301 tccagagcat tcagttttcc ttgttggctc tcatgcacac tgcttagaca aatcctgcta
      361 cctgtcagcc ctcctgtgtg tgccaaacag gctgccaggt taacccctgg ggaagctgag
      421 agacctgctg acttaacccc tgcttccctt caaataatcc actgtaaata cataggacgt
      481 taacaggcta actgttctaa tcagggctgg atcccttaaa atctgtttca tacacagccc
      541 ttaagaacta gggatctaag catcactgct ggaagaggaa aggattgctt ccaataatac
      601 aagcactaaa taagcagatg gatagaacac actgaaaggt tttaatcccc taaaggagtt
      661 agagaaaata tacgcatcac tt
//
LOCUS       KCPA01002949             768 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 324160tic ultra-conserved element locus
            uce-1048, sequence.
ACCESSION   KCPA01002949
VERSION     KCPA01002949.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 768)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 768)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..768
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="324160tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>768
                     /note="ultra-conserved element locus uce-1048"
BASE COUNT          243 a          125 c          149 g          251 t
ORIGIN      
        1 aaagtagcgg aatgggaaat agcactagat cttctgagtc ttactgctgt gtccccatac
       61 attctagctg ctatggtaac cagttaagac aatcagtaga tggagtttag acattgttat
      121 gtacatgaag tacatttaaa ttcttccatg tacattttcc acagtattaa gggttgtact
      181 ttctttttta gatcagctgc atccaaaaag tattaaataa aacttgatac aggtgatttt
      241 gcagcatgta tacaaattag tttagataaa tcatgcaatg tcctacaaac tagttatttc
      301 tggcttattg taatatagct cctgaatttt ttccagcagc ataataaaat ggctaatcag
      361 gtgaatggta atgcggtaca gttaaaagaa gaggaagaac caatggatac ttccagtgta
      421 actcacacag aacactacaa gacactgata gaggcaggcc tcccacagaa ggtggcagag
      481 agacttgatg aaatatttca gacaggtata atatgcattt cttgtttctg attggttatg
      541 aaagtgaggg cataccattt tcaaattttt atagaaaaaa ttcattgttt ttgatctgtg
      601 tagctctgaa tgttttgcta ctttgatttc cctaaaggca aattgggttt gacattgact
      661 aattacttga cacatccttg gagttgtatg tgatatctta gttgggtgca gagcactagt
      721 ttcctacacg tcaaatgaag atgtatgttt ccacatacta aactgtac
//
LOCUS       KCPA01002950             359 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 324263tic ultra-conserved element locus
            uce-4489, sequence.
ACCESSION   KCPA01002950
VERSION     KCPA01002950.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 359)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 359)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="324263tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>359
                     /note="ultra-conserved element locus uce-4489"
BASE COUNT           91 a           97 c           74 g           97 t
ORIGIN      
        1 gtgctcctga agcaacagga gatgggcaat cctgctcctc agtcccatcc tgccaggccc
       61 tctgccgtcc ctcttccggc ccagctacca tgtgaaagag tctgtgactg aaatcttaat
      121 gctaccaaga cccagcaatt ggcaccaatt aaattgctac attcatgttt gaattgcttt
      181 aactggcgag acacactgtc ttatttatac aaaaaaatat gtttgcttgt gggtttgtct
      241 gaaccagtgc cagcagaaaa tacaccattt caaggcctgt gctctgcaag ctcattctcc
      301 tcttccaaac tggaagtcac cttggtttca gcctttgcca ggcaatggtg gcagaacag
//
LOCUS       KCPA01002951             486 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 324371tic ultra-conserved element locus
            uce-2146, sequence.
ACCESSION   KCPA01002951
VERSION     KCPA01002951.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 486)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 486)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="324371tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>486
                     /note="ultra-conserved element locus uce-2146"
BASE COUNT          151 a           99 c          121 g          115 t
ORIGIN      
        1 tttgcttgtg gtctgtcttc tgggaatggc ttccgaggga tacaacaacc tacctccaat
       61 cctgccaaaa aaagctacag ctccctcaga gatcaagtgg gcagcagccc cttaacagga
      121 actggtctat gagctaccac cacatgtcta attaatgacc ctgccggtcg cagctggaag
      181 aactgagctg ggggtgatta attaaattag ctggcagagg aaattacagt ggaaaagcca
      241 aagtttgatt gctccataat taaccacagt gcaaataata tctgcatcta taacttccag
      301 cgatgagatc agaagccaat tgaatttggc actgattgaa gctgtaaata tcctgtggtg
      361 aaaaatgata ggtttgatct gaagggaaaa cttacagaaa tggacatcca gcggatgcag
      421 gaggggagca ggggacagcg aggaaagagc actggaatta gatcttgatc tcagctgatt
      481 tctgca
//
LOCUS       KCPA01002952             384 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 324581tic ultra-conserved element locus
            uce-451, sequence.
ACCESSION   KCPA01002952
VERSION     KCPA01002952.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 384)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 384)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="324581tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>384
                     /note="ultra-conserved element locus uce-451"
BASE COUNT           89 a          126 c           78 g           91 t
ORIGIN      
        1 ccaaacatca taaccatggg accaggtttt cctcctcatc cgacagcaac ttgttcttct
       61 gcagagcagc gggtgccacg tccgtaggtt cggcgatgat atgttacctt gtgagctcct
      121 gctcccacgg tggctgctct atagagggct tcattcctgt gccactcatc taaaaagggg
      181 gaggatgtct acagagcaca cattaatatg cggcacataa ccacgtctct gaatgccagc
      241 cttccattct tcattaaaca aaatggctgg attgcagtga ttgttttccc ctccagcgcg
      301 cacaggcaca cacaccacgc acgcaggcac atacccacac accccccaca agcactctgg
      361 ctccctctcc tttcctccct catg
//
LOCUS       KCPA01002953             845 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 324691tic ultra-conserved element locus
            uce-1003, sequence.
ACCESSION   KCPA01002953
VERSION     KCPA01002953.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 845)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 845)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..845
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="324691tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>845
                     /note="ultra-conserved element locus uce-1003"
BASE COUNT          249 a          150 c          189 g          257 t
ORIGIN      
        1 aaaataaagc ctgaattgaa tacagattct aaagaaatca tatatttttc tcccattctt
       61 tttacagttg tacagaatta gcttggaaag cagttttaca tttattcact cctggtatca
      121 tttttaattt gcatcttgct gcttgatgcc tccacttgat gggtacaata tgacaacagg
      181 taatagatac aataacagta aaacagtgat cattactgct gggactagaa acacccatca
      241 ttgcagcttt cctcagctgg aaagttttga catctgctgg tttgggacat agctgaacag
      301 ctgtcagcag tggggtagct gctttcagca gcagttggcg ggatggcagg gtgccagctt
      361 gtaccatctg tgcgcctgac atttcattct aattaacagt agggttaatt gttctggcag
      421 gctcaaatgt agtgtctaac attacccaag ggaaacatgt acaagtgcag gagtggcagg
      481 gagctgggga cagcgttgct aacaaaccta ttgagggaga atggttaaca actactgatg
      541 attttactag ctggccacat gcaataaggc tgaggtattt ttttattctg atgaattatg
      601 ccaagcctgt aatgatgtag aagaaatcaa gctttgaaag gctgagactg ctgccttggg
      661 gcaattgaga gggaacaatt tgcatgttat tactgcatat tcatacctaa ttgtgttagg
      721 ctttgctaat agagcagaat gacagtatga aaaatcgagc aactgcttta tagccaacaa
      781 agctagtgtt ttttccctag tgctgaatga tcatttagac atttagttgt tcaatatgac
      841 aagtc
//
LOCUS       KCPA01002954             671 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 324802tic ultra-conserved element locus
            uce-5385, sequence.
ACCESSION   KCPA01002954
VERSION     KCPA01002954.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 671)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 671)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..671
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="324802tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>671
                     /note="ultra-conserved element locus uce-5385"
BASE COUNT          192 a          146 c          121 g          212 t
ORIGIN      
        1 ttttattttt actttgctac ttccttggag ttaatctgtt atgaaaaatt acttccctta
       61 tttattttta aataacggga gtacagagac tcccacacta cagccctgtg cggagaactg
      121 gctgggtatt tcatcacagc gctgagagcc tgaacgtctg ctaacaggca gttttccagc
      181 tcactggcac aggcacaagt gaaagcagca cattcatttt gtgcaatttg ctttaccttc
      241 ccacatggag ttggtgcatg taaaaggctg ttaagtacta aattattcct tatcaaatca
      301 ccatcatctg gagtcatgat caacactaat taaattactt tcactgaaca cggctccagc
      361 ctgctgcctc aactgcgagg tacattttat tttgcttact gtacagtcct agcaaggtac
      421 agggcacagt gctagaaggc atctgtgctg cagttttaat taaagtttac ctcaccttcc
      481 tcctagcttt atatgctagg gtaaagtgta tcaaatcaag taggttaaca ccttcacttc
      541 atttagagaa agcattacag accaaagtga ttttatatta gatctttatc ttaactacag
      601 ccagaaagat aatgtagctg taaaatttaa agccttcctc aggcagagtc accatgctaa
      661 gctttatctg t
//
LOCUS       KCPA01002955             678 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 324908tic ultra-conserved element locus
            uce-7724, sequence.
ACCESSION   KCPA01002955
VERSION     KCPA01002955.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 678)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 678)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..678
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="324908tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>678
                     /note="ultra-conserved element locus uce-7724"
BASE COUNT          222 a          120 c          159 g          177 t
ORIGIN      
        1 cagttgatgt atcctttcca tcctgacaga tgtgacaata gctggaaaca ctgttcctgc
       61 caagagcttt tatcaagtat gttataacaa ctagtaataa gtgtaaataa taaatggcta
      121 cgatcttatg ggaaacagtg gcaatactaa acaatttttg gtgcttgctg atgggagtct
      181 gcaagtcctg gaattccctg gcttcccagt agagttttgg cctgacaata aacaacagtt
      241 taatacttta tctaatccca gccaggaggt aagttcaaca gcaagctttt gcagatgttc
      301 acatccaata atctattcat aattgatgaa acagggaggt cagatgtaat ggttgctact
      361 attccagcaa caaataaatg gttattgaca aaacaaggca gtgtggcact gagtgctgag
      421 cagtgacaag catgaaacaa tgctgagaca gaagtagtga tgtgaataca gaccttcatc
      481 tcctctctgt gatgtgtggc accagggcca ctctgacaca taagcagatg gaggtgactt
      541 gtaaaggaaa agtgagattc tgcaagtaca tgaaagacaa aggcagagcc aggggaagaa
      601 aaaaagggtg gacaggataa gtgcaataac gtgaattgtt aagaaatctt tctgtgatcc
      661 aggtgtctgg actgctat
//
LOCUS       KCPA01002956             640 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 325015tic ultra-conserved element locus
            uce-1062, sequence.
ACCESSION   KCPA01002956
VERSION     KCPA01002956.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 640)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 640)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..640
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="325015tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>640
                     /note="ultra-conserved element locus uce-1062"
BASE COUNT          191 a          170 c          109 g          170 t
ORIGIN      
        1 aaaaccaggg agagaggaaa attaactaaa aatatgcagc cttgatgtcg attcactaaa
       61 gaatatttat tgtcctctca cgcatcttgc ttgctctcct aacaaatata atactgtctc
      121 tctcatgccc tttctctgtc tcaccagctc tgtctctgtc tctctgatac caactctgac
      181 aaaccgtgcg attctgatgg aaaattcatt agtcgtcctt tttcttcccc attttcccag
      241 tcagcttcgc gcctgatctg tcagcctctt ccatcctgat tatctggaga cgccaatttc
      301 aaagagacat cttaatagtg atgtcaacga attaattaga tgtgttaatg agctaaaagc
      361 aacccaaatt aaattaatgc agtaataagc acagacagca aaattagctc caatttctgt
      421 aaatgattct gaactgtaca caacatctca tcctgctaga acattaccat cccccaaagc
      481 taatcaagaa ctccagtgca attaactgct taattacaaa acacacacac agctcataga
      541 tccagcagca ggaggggtgc gctgggctgc ggagcgagcg gggaaattct ctgcaacaaa
      601 cccgccctgc cacagaggct ctgcccccag gctcctcaag
//
LOCUS       KCPA01002957             451 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 325125tic ultra-conserved element locus
            uce-3312, sequence.
ACCESSION   KCPA01002957
VERSION     KCPA01002957.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 451)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 451)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="325125tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>451
                     /note="ultra-conserved element locus uce-3312"
BASE COUNT          111 a          129 c           91 g          120 t
ORIGIN      
        1 tagagaaaac cgcctaacac ttaaattccc cagagtaact gttcatgatc acaaatttgg
       61 ctaaaggatt tttttcatta ccctcaaaca tttcctttca cctccaacct ctaggcagag
      121 ccatcgcttt ccctttagac cggggaacat aaagccatgg ggccatcggg gctggctgtg
      181 cctgaccccg agggcccttc tgtcaatcac tgcctcccca tcccttgctc tctttcacac
      241 caggcagctg tacccatcgc tgtcaaccag gtaacaacca gcaaacaata gaggcctgaa
      301 tgcctggtct agacactctt ttagccactt atttgctgct cttggcagct gttgaagcat
      361 aaataagcag tttgtaatca gaaagctgac atcattgcag ctcagctgag agggggaatt
      421 gttgctgtgc actgagctgc tttcctccct t
//
LOCUS       KCPA01002958             514 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 325234tic ultra-conserved element locus
            uce-7494, sequence.
ACCESSION   KCPA01002958
VERSION     KCPA01002958.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 514)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 514)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="325234tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>514
                     /note="ultra-conserved element locus uce-7494"
BASE COUNT          165 a           80 c          113 g          156 t
ORIGIN      
        1 ttctaatcat ttggggaggg gtagcattaa tcttaatgtt taaagtgatc cagtttcgaa
       61 atgatagatt gtttagaagc tgactgaaat tcttctgtag gaactctgtg atcatagggg
      121 tcctcaggtg cactgaggca ctgaaaagcc agttttccct gacacatagg cctttttatc
      181 atcaggatga ggtagtggtc gtattttaat taaaatgtca gaacaaatac tgttggagtt
      241 attgaaaatg aatcaccaga taaagtgagc actgggccat ggcaggtcaa agaggcaaag
      301 tcacctggag aagaggactc cattcatttt cctgcctaaa tgaggaagaa gtaactttta
      361 tgagcaatgt gaacttttaa atatattaaa gagcatcttg ccctgtatta aggctcagac
      421 tttcacaggc tgatgaattt aatttatatt tcaaactgtt cagtatgggt agcacctaaa
      481 ctatttgaca gttataaaaa gatactgaag gaat
//
LOCUS       KCPA01002959             763 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 325344tic ultra-conserved element locus
            uce-2104, sequence.
ACCESSION   KCPA01002959
VERSION     KCPA01002959.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 763)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 763)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..763
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="325344tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>763
                     /note="ultra-conserved element locus uce-2104"
BASE COUNT          200 a          166 c          166 g          231 t
ORIGIN      
        1 ttttccttta aggagaagtt aaaacacctt gctgcagttt tttcatcacc ttaatgcaag
       61 attcacattg ggctgcatag cttcaattat gcacaagtgc aatgttaaat gttaagatgt
      121 gagaagcaat ttatttctcg cgtaattcat tttattttgc aggtttctga ctttccaggc
      181 tgcaaattct ctctccctct ttctcctatt gaccacttgt taaatctttt tgtttgtttc
      241 ccacctttcc cctgggaccc acagacagac agccttgcca gattcatttt ctgatcaaag
      301 ctgtttgatt tggtcaattt tgccacattg gagacgttct ctattacaga gataaatagc
      361 cttgggctaa ctgtcaacga aaacttgtaa gctaataaat tattccaatt tcttcctgcg
      421 gatttctctg gagacagccc taggaaatac actttttgat tagtaaattt ctctgtgtgt
      481 gtgtctggac attcaaatgt gtcgactttg attagcacca ttgcttttca agtagacgct
      541 ggctgagggg ctgtcagttg ccggcagccc tgatgcataa tgcatcaact gggcccggaa
      601 acaggagcct catccaaggc tggaaaggcg ggaaaattgc cccaactttg cacggtggga
      661 acgatctgag ttgcaaagac tttgaagagc agaggagcct caggggagga aaatcagtag
      721 gagcacagaa ggacaaggac ggatccaggc aacttgctgc cac
//
LOCUS       KCPA01002960             634 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 325451tic ultra-conserved element locus
            uce-6998, sequence.
ACCESSION   KCPA01002960
VERSION     KCPA01002960.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 634)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 634)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="325451tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>634
                     /note="ultra-conserved element locus uce-6998"
BASE COUNT          211 a          122 c          105 g          196 t
ORIGIN      
        1 ctaacaggat aataagtcct aatttttaag ttgtcaacat agtatatgta gtacttgcct
       61 tccaaattac aaattagagt gtatggatga ttaaaacatg aacaaaatgc agtgcatctg
      121 tcagaacatc atctcttaca ggtaacaacc tgtctaacat ctctttaagg aatgtagcta
      181 gtttccagag gtctaaagtc aaatacattg acttaaaaag tagctttaga gccaactgca
      241 gagctctgta cttggcaatt taaatgactg accattcaat ttatgagcat tctcagcaat
      301 aaaattcagc ctgaacttaa taatagcaca ttttatgtga caacgatgac aattataatc
      361 tatagatacc gcagttatcc tttggtctgg gggaagatga cactattaat tacacagact
      421 tgccatttgt cagacttaac ttggcaggcg attgagctct gaaccatctt cagcttgact
      481 tctacatttt ctattttcta atccactgga atgaagataa ttagaacaga gaaaaatgag
      541 aggctttcct gacttgttta aatcaaacct ctaccatgtt agtggcatat tcagtaacac
      601 cacagtcacc tcatggctgt gccactttaa ttaa
//
LOCUS       KCPA01002961             528 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 325555tic ultra-conserved element locus
            uce-1349, sequence.
ACCESSION   KCPA01002961
VERSION     KCPA01002961.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 528)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 528)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="325555tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>528
                     /note="ultra-conserved element locus uce-1349"
BASE COUNT          154 a          114 c          124 g          136 t
ORIGIN      
        1 tatacataca caggcacctt ggtttggctg tctcgtgccc gcaggccaca gtcacattat
       61 catctggaaa ttggataacg acagcacaat gacaaatcca ggttgcctgc aataaggtgc
      121 taatcccttt gctttaatat cggagcagcg tgtaatgatg tttggacatc actccagttt
      181 actgacgacc ccactggggc tggcaataga agcgtacaac tgtctaacaa gccatcaggt
      241 gaccgccgtc gtcaaagcaa cgggggatgc aatctaatct tccctccgtc ccttccagct
      301 cccaataagg accagattat agaagtggcc catcaatgct tggtaactca aatcaattaa
      361 cgttaattcg cacaatgcta tgatgtattg tgatcacttt catttcggag aagggggaag
      421 aaattgctat aattcaccta aaatgaggtt gtctatggtg ctgaggtatt aattgggtgt
      481 ccatattaaa tggaaaagga gcacggtagt gaaggaaaag tggatgag
//
LOCUS       KCPA01002962             796 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 325665tic ultra-conserved element locus
            uce-2611, sequence.
ACCESSION   KCPA01002962
VERSION     KCPA01002962.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 796)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 796)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..796
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="325665tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>796
                     /note="ultra-conserved element locus uce-2611"
BASE COUNT          213 a          205 c          173 g          205 t
ORIGIN      
        1 ccaagtgttt agctatacag gggatacttg ggcatctggg ggattttcat aactgaagac
       61 ttgtgctgta tcacaacaaa ttaagcgtaa ttaaacactc tgttcagtgt ctattgttaa
      121 ttgcagcagc taatttgatg cttagttagt gctatgttcc gaactatttc caagcacgca
      181 gaattctaag actgcttgct tagtttttca cccttgtttg acagatttta gctcatttat
      241 tacttttgct aaacgatcag aaattccctt gccaagacag tactttgagg tccttcactt
      301 tcaccaagtc agacactaaa tcatagggga caattatcag caaatgctct ccgacaggcc
      361 ctaagcctgc tgaggtaatg cagctgacaa actttgatgc gccatgccca tgcacattat
      421 gttcacgtag tgtgtacatc tgggcaccct ttatggcgat gcagcaaaca gccaatcatt
      481 tattccactc taattagcac acatgtaaat cctcaccaat caagccactc acagggttac
      541 cgttgtggca gccatacagc gagctggcag gacacgggaa gaaagtacaa gaagcaacta
      601 ttgggtttga tttgaacctg ccgtcaagcc acggcaggag tcctgactgt aaccagctct
      661 ccccttcaca acccatcatc gagctccacg cgaaaaaggt catcgggcag actgccgccc
      721 ggccgagacg cgtggattct tcgcaggctc tgggagcaca cctgaagcga cgcgcggctc
      781 cgatagctca cagcgc
//
LOCUS       KCPA01002963             677 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 325777tic ultra-conserved element locus
            uce-1748, sequence.
ACCESSION   KCPA01002963
VERSION     KCPA01002963.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 677)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 677)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..677
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="325777tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>677
                     /note="ultra-conserved element locus uce-1748"
BASE COUNT          215 a          123 c          108 g          231 t
ORIGIN      
        1 aatcacaaga tgtcaaaaag gaatgtttat aaactaattt gcattactta tgatttgtgc
       61 ctgtgcaaca gggaacacat ccatatttag tctagggggt aggcgttatt attggctcaa
      121 ttccacacat accaaatgtg aatacttatg ttcttcccac aaatttcttc gcattagact
      181 ttattctttt accaggttcc agatagcaga cagctcttgt ttttcactta tgttttcctt
      241 ttaacaacag tcattaattt actgatatgc tgtctatcag aaccacatca tcttgattag
      301 agctgttatc ctaatcaaaa ggctgataat taagactatc catctgtaga gttccaagtg
      361 ctaagatgag ctgaagatcc taattaagat tatttaggtg ttacttaaat gccatcattt
      421 gattcagcta atcataccag caggtacatt agatttgcat taatgttctg ctgaagccag
      481 cagctcttta aacagatcaa aaatgtagat tacaggcacc attttcaaac atctttctat
      541 caatataaca ctgagacaat gcattaaagt aaaattggaa gaaagacaat ttcagtcttt
      601 ctcagactgc tttatgataa tcagtagagt aagtaattta tttgcttgtg tgtcttagca
      661 gctccaagct taagttt
//
LOCUS       KCPA01002964             748 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 325887tic ultra-conserved element locus
            uce-6754, sequence.
ACCESSION   KCPA01002964
VERSION     KCPA01002964.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 748)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 748)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..748
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="325887tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>748
                     /note="ultra-conserved element locus uce-6754"
BASE COUNT          226 a          155 c          154 g          213 t
ORIGIN      
        1 cccaagaaga tcataaatac tttgttctaa ttgttgagga taaattacaa caacacaaaa
       61 agcatcctgc tcactctgtc tgcatctcct gctgcttggt cagcacaagt ccactgttcc
      121 atttttaaat caaattatgc ttgtgataat attgtcttga gcttacagtt gctgacatgg
      181 gtatcaacaa aggcttagcc agtattttaa taagaaaaca aaatacagga aatactctag
      241 agtttccagg tggatcatta acaagacgcc ttggagggct gagactgcca gccagcacag
      301 ggaatgcatc acagttcgtc atacaactta aacttctttt gacatctagt tatgtcgaaa
      361 tgtgactgat cacctagggg tccaggctcc tgtgagggaa aagttcactg acagacagcg
      421 aacgaagctg atcttaaatg agaatcaaga gaaagcagca ttccagtgtc tgacagtctg
      481 cagctgctac ctgggtctgc ctaacgaaga cgagcctgct ctgctgaaca gttatattag
      541 catctgtatg cttctgtctc attatcacac atctgcccac ctttattcga atgaagcttc
      601 ttctgatctg acagctcagg cattgtcagt gaatagatat tatgggagcc gggtacagca
      661 gcttagagtg ttagctttta ttttctaaag actgttgtac agtttgacag tataatgcca
      721 cagaggtaaa gaagataatt aacatatt
//
LOCUS       KCPA01002965             633 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 325995tic ultra-conserved element locus
            uce-6484, sequence.
ACCESSION   KCPA01002965
VERSION     KCPA01002965.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 633)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 633)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="325995tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>633
                     /note="ultra-conserved element locus uce-6484"
BASE COUNT          215 a          110 c          104 g          204 t
ORIGIN      
        1 tactttcatt cacacttttt tggtgtaaat ataactggct gcttttggca aacataaaga
       61 ctttttgaaa cagtttccta aatgtatgca tttcccttcc ttgtagccaa taaaatataa
      121 ataacatttt cacggtgacg aatgacatgt agtacagtat tctatgatca tggttccagg
      181 attttatttc ttttagcttt gtatacatta attaagtata cacaatcagg gttgagtgca
      241 gagacagcta aataaacaaa tgacactgta gaaaggtctt tctgcatact aatcatatcc
      301 tacatctgca agcaaaagct ctataaatcg atttgctctt tcacatcaaa agacaaacag
      361 tgaggcaagt cagcagttcc tttgtcaaag tcacagagat tgctgttctt cacaaatgca
      421 tttctacaga gctgaattca accatttgat gattagcatt attggcaact cttcaaagaa
      481 gattcatcaa gtaatttgca attggattgg ttgccatttt tttgattcta ccccatgaaa
      541 ttgaacaaaa aatgattgac atttgaattc ttatttggag gacaaagtga actagcataa
      601 gaaaaagaag caagcagatt cccaagagat tga
//
LOCUS       KCPA01002966             380 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 326088tic ultra-conserved element locus
            uce-4671, sequence.
ACCESSION   KCPA01002966
VERSION     KCPA01002966.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 380)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 380)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="326088tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>380
                     /note="ultra-conserved element locus uce-4671"
BASE COUNT          154 a           73 c           69 g           84 t
ORIGIN      
        1 tgcatcagct ccagttatta aacaactagc ttttagtaaa aaaaaaagca aagaacatcc
       61 catgccatga aggaaatact gagaaacaaa aatgggatag ttactactac tgtgatcttt
      121 gcctagacat agtcgtttca aggtggaccc tacaaggtaa aacaatacaa gacacacaga
      181 attaggtaag actaaacaca acaaatcaga tggacaagct tccgtacttt taagcaatca
      241 aaaagtagtt attatgcaag aaaggacaga caaagtcagc agttcaggtg agtaaaggaa
      301 gcctaaataa ctggacagct caaacctttc ttattgtgca gccattcaaa agctttggaa
      361 agtaccacag catgccaaaa
//
LOCUS       KCPA01002967             591 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 326194tic ultra-conserved element locus
            uce-1098, sequence.
ACCESSION   KCPA01002967
VERSION     KCPA01002967.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 591)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 591)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="326194tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>591
                     /note="ultra-conserved element locus uce-1098"
BASE COUNT          192 a          106 c          119 g          174 t
ORIGIN      
        1 attttgattc aatcagaatc cctaaatctg acaacctata atcaaacaaa gggagtactc
       61 tagtaggtgg ggattaacag aagggaatta aactgtcatt ttgcaacagc ttagaccaat
      121 atgaaagccc atttatgagt ctctcagtaa atatcccttt tgttttgtct aattgctagt
      181 ttgaatgtat cagactcatc aatgggatta gggttaatag atgtttggtc acgcataaca
      241 tgcagaggag gaatctgata cacacacgca caaaaattgc acttaatgag cttagcaaat
      301 gtttgccata tttttaatga accctggggc tgtcatttag aaatgcttag caactgcttt
      361 tccatccttg aaaatagaac aactgaagga cattaacact atgtacacca taaataatgt
      421 gaactattta aagataccaa ctgggaggtg ggaatgatga cattttctgt gcaggagcca
      481 gtgatactta acacttcatg agtgtgttag atctctcaca tcccagacgg gcatctctag
      541 tttcctacag ggaatgggtg tgagtgtttg aaggagatca aataactcca t
//
LOCUS       KCPA01002968             551 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 326299tic ultra-conserved element locus
            uce-5307, sequence.
ACCESSION   KCPA01002968
VERSION     KCPA01002968.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 551)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 551)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="326299tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>551
                     /note="ultra-conserved element locus uce-5307"
BASE COUNT          179 a           79 c          106 g          187 t
ORIGIN      
        1 atcatttcta tcctgtactc taagtgattg actattctgg tcacagttgc caaaagtggg
       61 taggtttgtg ttcatgaata agagaaaaca tttgtttctc atgtgtttgt tctgtttgca
      121 tcaacctgaa aaatagtaaa aggaaaggga tgataacctt tgaaaaacat ataattgatc
      181 atttggcaga ctaagttatg aatattagtc atagaaacct gcagatagtg gaggcttaat
      241 atcaaagcta atgatttatt ttatgttaat gactttctgc tagggcataa aagactgctc
      301 ataatggact ctcagtgctt cagttgcgaa ggctaatggg ataatcttac ccaaaactaa
      361 gctttttgaa gtaaatcatg gtgttttttt tcaagttaac aaatgtgtta tcaactgatt
      421 ttttaagaac tgcttgtagc ctttatagga aaacataagg caacttcagc agcagttttc
      481 tttgtgttgg aaatgtctaa aaataatatt caagatgtgg aagtcattca gtcacttcaa
      541 tcatagggca a
//
LOCUS       KCPA01002969             575 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 326410tic ultra-conserved element locus
            uce-2817, sequence.
ACCESSION   KCPA01002969
VERSION     KCPA01002969.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 575)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 575)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="326410tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>575
                     /note="ultra-conserved element locus uce-2817"
BASE COUNT          173 a           91 c          109 g          202 t
ORIGIN      
        1 atctatattg gttatttaac agtgatagtg catattgtaa ttgatctaga taaagatggt
       61 aaagtaggca gatgtgctta aaccttatgt ccctgtgcag tcatattggc caatgatggc
      121 ttaattaaaa tgtgcagctt cacattgtag cttggtacaa caaaattcct atgcaccttt
      181 acttaaagtg tttatcaaat aatacggaca cttaagtggt tttcaagtga agaattctgc
      241 tgaatgtgtg tgattgttta cagattttgt tctccatttg ctcccaaaga atacacttaa
      301 acactcaatc aattaataac ctacagcagt ttgttttaga ttcaataatg gggaatggtg
      361 cattgtacta ggatagtcag atatacccat aggaagtgtc agtggtcaaa atgtttccat
      421 tgccagaagg tagtctgaaa atggtctaga aattcaatat ggcattgacc ctacattgta
      481 tacatgatct gcagtctgtt tctcagcctt atttgaagca gccattttat tttatattct
      541 ggatttcttt gtctatagct ataagtttga ggcat
//
LOCUS       KCPA01002970             718 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 326521tic ultra-conserved element locus
            uce-2432, sequence.
ACCESSION   KCPA01002970
VERSION     KCPA01002970.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 718)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 718)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..718
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="326521tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>718
                     /note="ultra-conserved element locus uce-2432"
BASE COUNT          218 a          141 c          127 g          232 t
ORIGIN      
        1 atgtgacaga ggttggccaa gattccagct ggacatcaaa agaagacaaa atatttcctt
       61 gaaaaaaaga gacaagtgtc agtccattaa gatttagcat ttggggtcct attttctttt
      121 gggcatgaca aaattaattg caaatacatt aacaattgat ccataaacct ctactgagtg
      181 ccttgcacgt ggacaggatc agtatctctt gaaatccact gctatttcca gagctcaaga
      241 gaggtgcttt gctcttgaaa atctaacaac cagttttgca atgtcaccaa tttttttcaa
      301 tcatccaaat accaccaatt caattaagct cataaacttc ctacccatag ttctccagga
      361 taagcagctc catttaaaag tgagtgcgga cgagcttgtg ctgtccatgt gaaatattgt
      421 tcaatcaaca gccaaagttt tacttgtcag ttttgatata tccgataata gctgtaggtt
      481 gttttgcaat gtccaatgtt ctgtgaagat gggcttttca tattctttat tgtttttttc
      541 tgacaaaatg ttgcctggac ttttgcaatt ttgtgaaatg aaacaacagt aaaaacaata
      601 tataatttaa ccctcataga cctagctgga ctgcagataa gcatctttcc caggcttatg
      661 gctagttttg gccaggatat aatgagttcc tgttcattga tcccttataa gcatcctc
//
LOCUS       KCPA01002971             534 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 326628tic ultra-conserved element locus
            uce-7410, sequence.
ACCESSION   KCPA01002971
VERSION     KCPA01002971.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 534)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 534)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="326628tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>534
                     /note="ultra-conserved element locus uce-7410"
BASE COUNT          155 a          116 c          123 g          140 t
ORIGIN      
        1 catcctcagc acagacacac ttagaccttg tccacatggt gctttcactg gaccacactg
       61 tacctctctt tgtctccata tcctagtaat cattccagga tcaaaaccta ctttctaata
      121 tccagctttg gttgatgatg atgtatgaag cagagagaaa agagacagct tgattttcat
      181 aggctaggtg ttgaccctgc tgggcttagt gtagcatgaa actagttttg actagtaaac
      241 tgaataaata taccagggaa gctgtagagg ggcaatatat atgcaacact aaggtgccat
      301 ttttgcaaaa tgactttgat tcatcagagg gctaagctga tgcccagtgc attagaaatc
      361 ctgtgaacag ggaaatattc aaattcataa tctgtttgca ggaaacagct tcctcttcta
      421 cttcaaaatg tgaagccatt tggcagagca gctcagggca aagcccgtgg ggcatggtgc
      481 tgccaggcag cccaagggat gcagcaagga ggtgaacaaa ggcttccctg ctgc
//
LOCUS       KCPA01002972             461 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 326846tic ultra-conserved element locus
            uce-117, sequence.
ACCESSION   KCPA01002972
VERSION     KCPA01002972.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 461)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 461)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="326846tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>461
                     /note="ultra-conserved element locus uce-117"
BASE COUNT          158 a           87 c           80 g          136 t
ORIGIN      
        1 ctgctcagtg gaaggggcaa gggctgcaac aacttattta cacaattatc taaatacgat
       61 taaacagctg atggacaaat attaaactgg aaaatgtata gtcatttcag cttaatgtaa
      121 tcccctttct gtaaacaccc aagatgattt tttttcaacc agaacagtcc tgacatctca
      181 taagcctaag ggtgaatagc aagagattgt ttttgatagt tataaatatt caaaagacat
      241 gcagaccatc tgctttcata atacaggtaa agcaagactg aaatggtgac tgctgtataa
      301 aaatggttct tttaacaaag tcttcctctc ctcgaaaact ataaagacag atgtcaaaaa
      361 ctgtttacac agggtaatca ggagcgtgca aaatgtaata ttccttttac acacagtgct
      421 tgctaaagag actttttctt cccatctgtg tgttgcaaca c
//
LOCUS       KCPA01002973             751 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 326957tic ultra-conserved element locus
            uce-2444, sequence.
ACCESSION   KCPA01002973
VERSION     KCPA01002973.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 751)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 751)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..751
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="326957tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>751
                     /note="ultra-conserved element locus uce-2444"
BASE COUNT          215 a          152 c          156 g          228 t
ORIGIN      
        1 gaacatcatc aggaaggagg ggctgttggg aaagttattc taatcaccaa agtttatttg
       61 aggtacaaat gcaattttaa gtgtaattgg ctgtcgtgtt aagctccctg tccactgtga
      121 ggaaatcacc gttatagctt tcatatggga aggaattcag gagtgccttg tttacattgc
      181 taccatttat aaaacattta aagcagctat tctgctgaat aaacattcaa gagcctgaag
      241 gataagcata tcgcttaaac ttcttaagac taaactttcc aaaccatttc ctgccagagg
      301 gacctagcag taaaattgca aactctgtgc tccaagatga gataggcaga attagattaa
      361 gcagcttact gttgacatgt ctattgatct gggttcagtg ccgtttcctg tctctgctag
      421 cagttagatt gctgtataca ataacacagt ggcctggttt atgtgaaatt gggggactcc
      481 gagcatcaat tactccagga aggcagtggc actgggagat aaggttaagc cgctcacagt
      541 gtttaagact gctgaaaccc aagcaacata tttgctgtct aaattgctgc ttataaattt
      601 gacagcgttc catttatgtt gttcccgctc tccaaagaga gatcatcctg tattattctc
      661 tgcaggtagc agtttggttc tcattataaa cacgcattgt ttgttaacct tcacttccca
      721 tcagcccttt gctaaaagtt ccaaagcatc a
//
LOCUS       KCPA01002974             656 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 327068tic ultra-conserved element locus
            uce-6169, sequence.
ACCESSION   KCPA01002974
VERSION     KCPA01002974.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 656)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 656)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..656
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="327068tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>656
                     /note="ultra-conserved element locus uce-6169"
BASE COUNT          186 a          128 c          168 g          174 t
ORIGIN      
        1 tcaaccggca cgaggccggc atcagagctg ctgcggcttg gaatttgaca aggcatctct
       61 ccaaagctgg tccaaaggtt atgatgtcca agatttatct tggtaatttt agtgctggcc
      121 cattggaagt tgctgctggt caaagccttc caatgggata tgagccacac ttagtcgtca
      181 tagctgagtt attttgctac tcagctatgc agaagcagca ggcctttagg ctaattaata
      241 aatcatcaac gcatttgtgg tgtgaaaaat gaaatattta tgcttgccag agtaatgttt
      301 ctgtcttgca gccccatgct ctgttgatgc ctgatggagg atgaagtaaa taccagctgg
      361 tgtagaatga gcagaatata attactttcc acaaagttaa ctgaatatta aaaatagaat
      421 tcagagaata tatagataca tgcctgtaag gcaggacata gccaatgcat gaagggagca
      481 cttgcctaac tggtaccgtg gggctgggaa acctgcagga tccgtgttgt gtacaaatat
      541 gtcacacaga ggccttttca gagagcagcc agtggccagc tggagtggtt aaaggcctga
      601 agggaagcca aggatgctct acttttccgg tcagtcattg ttaggggacc agtgaa
//
LOCUS       KCPA01002975             639 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 327179tic ultra-conserved element locus
            uce-8032, sequence.
ACCESSION   KCPA01002975
VERSION     KCPA01002975.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 639)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 639)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..639
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="327179tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>639
                     /note="ultra-conserved element locus uce-8032"
BASE COUNT          168 a          154 c          126 g          191 t
ORIGIN      
        1 aaaaaagacc agatgcattt aaagatctac agacaaaagc tgccagacac aacaaggctt
       61 cattcaccat tttgaaatgc atttttgtca gcctgcttta agggctgaag ggcaccacat
      121 catgaagagt cgcatggcaa tttttaatag catggactta ggaagggcag taggaaacac
      181 acaaatggaa tgtttttaaa caacaagctt atgcatggcc taaggaactc tttgtctaga
      241 ctaggctaca cactggggta ggtacctctt ctttatcagc ctcaatttcc tggtacaaca
      301 atccatatct ccggttagca atttcatctt cagataaatc tgagttgttg gtctcactgt
      361 cttttggact agttgaactc tcggtgctag catttctgga acttcccatt tgaaacagag
      421 acaagggtct agctatctcc ttgctcggtc caagattgct aatgcctgcc tgctccccag
      481 gcaaaccttg ttttattgga gtgtcctgaa ttacgcggct cgtgcttgcg cctacttccc
      541 cccagttgtt atcactagct cctaggtctt ctgtagacca tttattacta atgcctaacc
      601 aaacgttttc catgttacct tccactgagt cttgcggct
//
LOCUS       KCPA01002976             513 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 327286tic ultra-conserved element locus
            uce-4724, sequence.
ACCESSION   KCPA01002976
VERSION     KCPA01002976.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 513)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 513)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="327286tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>513
                     /note="ultra-conserved element locus uce-4724"
BASE COUNT          174 a           90 c           89 g          160 t
ORIGIN      
        1 ccctattggt agagttttta ataggataca tatctttaaa agccaaaatg accagtgaaa
       61 ttaggttgta catcattttc tgggaaaaag gaaaaacagc ctcgacaggt gtaatttatc
      121 atttttctga tttaatacca aagaaatata ttaaaataat aaaaagaatc ctgaaatctt
      181 caaaatttgt agtgataaat agccctccct gtctttattg cattatgcct actaacagaa
      241 atattgcatg gtggatttcg ccagacaaga acgattattt tccaataaaa agttgcatat
      301 taaattccag cacaaaagta ggtgtctaat acttttgaaa tcttttatgg tttgccaggg
      361 aacacaattt taaacttaac taatacaagc tcagggtgaa gtgaagcagc attgaagctg
      421 cggcacaacc cctgcaagct gcagagccac cattctcaga gttcctttgg aatcattttt
      481 ggggtatttt tccagctgaa ctttacattg ctg
//
LOCUS       KCPA01002977             681 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 327400tic ultra-conserved element locus
            uce-491, sequence.
ACCESSION   KCPA01002977
VERSION     KCPA01002977.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 681)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 681)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="327400tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>681
                     /note="ultra-conserved element locus uce-491"
BASE COUNT          222 a          132 c          115 g          212 t
ORIGIN      
        1 cagacctgtt gtcctctcac aagctgcaaa ttacacaggc aaatgtaatt acccattctc
       61 tttgttatta gtgtgcagtt ggaagcttca agcaatcgtc cctatttcaa agcttactca
      121 caagatgcat ccttgatatt gaacacaatg agattttttt tttaaattca attaaacatt
      181 tgcctactgt gactctttat tcactgcaaa ttgtctctgt aaataatctt catcaaaagt
      241 cagaaccaat ccccattagt tgtttagatt aattaatgag tccccctgga gccacccaaa
      301 tgaattcaat ttaaacgtca acaacttggc tatggagttt cccaggttgg cattaagaca
      361 atattaaacc tgcaataagt cacatttaaa atgttaattc aaagaagctc tccatttaga
      421 gcatttaatt aaatccttaa ataaactgca tgggctcaat accagatggt tctgcatttt
      481 cattgcagca gagagccttg aagtcattga gggaagtaat attggaggca tggtgaagat
      541 aaccaggata tatagtgtaa taaaatctaa tcttgtttcc agcagggaga ttcagtgtat
      601 gtacacaacc taggctaaaa ttgtaagtta attacattaa ccccagcgta ctctggtatc
      661 tgagcagcca gagatgaaat t
//
LOCUS       KCPA01002978             754 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 327511tic ultra-conserved element locus
            uce-680, sequence.
ACCESSION   KCPA01002978
VERSION     KCPA01002978.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 754)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 754)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..754
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="327511tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>754
                     /note="ultra-conserved element locus uce-680"
BASE COUNT          227 a          162 c          141 g          224 t
ORIGIN      
        1 gcttggaatg gctcttgtgt tcttcctagt catcctgtga ttggagtgaa gttatattct
       61 atgtcaactt ccatgcaatt ttagtgctgc cttgggaatg tattatccca gggcataaag
      121 aattccataa aggttaggtg aactccgact ctgtctaagg aaatcagtga ataaattaca
      181 aaaactgtcc atttgcccgc cccttttaat cttactgtcg tattcaaact attgggcatg
      241 taactgaata tctcaactgt acctgaagaa ataatggagc gtgtctctgc agtaaaacag
      301 aacggcacta aactgatgag tttaacccag cagaaagagc ggctgtaaac atgacaaatg
      361 cctgctattg atttcaggtt taattactct gtgcagcact gacaaagccc atcagatgtt
      421 gttgtgaagt gtaaatggaa caaactacac ttcactgccc ataggaaact gatggtgtct
      481 gcagtttgca ttgtttactt tatcctccgt aaacttcagc cttgatcaaa ttaacaagtg
      541 ctactaccct ccaacaaact acaatgcact atgattttac agcaacagcc ttggaacaat
      601 agctctgcag catttcattg ataacaaatg tctagctaat gacagcagct gttgaacctt
      661 gtccagcatg gcatggcctc taaccagacc aggaaggatt ttcatcctct tacatttctt
      721 cccattttgg aggaaagata ttctaataaa acat
//
LOCUS       KCPA01002979             850 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 327620tic ultra-conserved element locus
            uce-752, sequence.
ACCESSION   KCPA01002979
VERSION     KCPA01002979.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 850)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 850)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..850
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="327620tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>850
                     /note="ultra-conserved element locus uce-752"
BASE COUNT          265 a          159 c          113 g          313 t
ORIGIN      
        1 tggaattaat gtattattat taatctagct acattttaat caatttaata tatagagtgt
       61 gctttgttgc ataatcccag tttatagaac tctttgttat cagacacttc tccaattaca
      121 tgtaaacatt ttagaaaaga ttaaagtaat ttctatttac agttaatggc tgtccgtact
      181 cctgctgtag cagagattat aggatataat atgctacacc atatgtttaa aggccaacaa
      241 tgcgacttct aatctcactc tggctaatca agctgctcag attattttac atacatcttt
      301 ggtttaggcc ttgacatgcc cttgtttttc tttcttctca aagctaaagt tcccctcttt
      361 gattagctga aacatttgca tggtcactac acatttttca ttttataaat cattatgcat
      421 tagcagtctt gatcgcctag cttgactaat cctgatgaac tgaaatcaca gctgaaggtc
      481 aaactccatc ccactgcaca ttcatattca aacaaatctg caccattgtt cattagactc
      541 ctaaaatcat tgaaaagaag ttgctgaata ccttacactt attctttatg ttttccaaaa
      601 ctttatctat aatgcttaac agatgataat agcagaataa tatcaaaatc aatacaagct
      661 tggagtgctt aattttattg aaagttgtac aacctagatc ttaatcaata tgtgtgccag
      721 aatatttctg gtgtttcacc aattattttg ctttgttcat ttaaacaacc cttattattg
      781 catatcttaa atgcaaaaac ttttattata attatgactt tggtctattc tgcataaagc
      841 gtgctgtcca
//
LOCUS       KCPA01002980             607 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 327728tic ultra-conserved element locus
            uce-3869, sequence.
ACCESSION   KCPA01002980
VERSION     KCPA01002980.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 607)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 607)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="327728tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>607
                     /note="ultra-conserved element locus uce-3869"
BASE COUNT          149 a          124 c          113 g          221 t
ORIGIN      
        1 ccccctcccc tcttcaggaa gaaatagaca taactgtttt ttgtggttag ataccagttt
       61 gaagtaattt tgttcttgtt ttgttttatg tgcccactct tttgaccaat ttataaggtg
      121 tgttttacat tgattttgtt tgataagaac tttttaaaac aaccgcattg atctaattct
      181 tttcagatct tatatatatc ttctgaaaat attcatcatc cccctttctt tggcctctct
      241 ttttagtctt ttcttctgtc tcctatcttc ttcttaggcc atgtttgcca gctacgtccc
      301 tgaaatcata gagttaatag gaaaccgcaa gaaatatggt ggttcctata gtgcggttag
      361 tggaagaaag taagtatccc aagaggctct gctgcctctg ctgcagtaga acactctctg
      421 catgccattt tctttttttt tttttgtgtt tttgtttcat gcatgtaggc aatgtttgct
      481 cgctacgtgc cagaaattgc tgctctcatc cttaatcgga agaaatacgg cggaactttt
      541 aactcaaccc gaggcagaaa gtaagtccaa aaagaccagg tgtggaaaga gcccctgaag
      601 gtggtta
//
LOCUS       KCPA01002981             497 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 327836tic ultra-conserved element locus
            uce-5075, sequence.
ACCESSION   KCPA01002981
VERSION     KCPA01002981.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 497)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 497)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="327836tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>497
                     /note="ultra-conserved element locus uce-5075"
BASE COUNT          157 a          109 c           90 g          141 t
ORIGIN      
        1 cttcatttaa taaatcaaaa ttgaatataa ataacatttt gcaattatga gtgtttaaat
       61 tccaaatttt ttaggctaat cactttcaga aacaaacaag agattgaatt tatatcgcct
      121 gcagttgtta ttggaaaagt atgcccagag attgctaaat gaagtcagtc ccagcgcaat
      181 tatgatcact caagcatgct ttcaacgtat cgtgccaaat taggtagatt tgagcaattt
      241 gacttcctgt accaaatctc gagggcactt ttgagaaagc acagactgtt tacaaacact
      301 ctcaggtttc ccgtggtgcc gaggcagcgg ccagcggcag cgcccgggca cacacctgtc
      361 aaaccctgac agcgatccca ctcccccatt ttggtaccct ttagcaattt aaaaaccaaa
      421 agaagtttta attgccttgg actcagtctt ttgaaaacca aaatgctaca atctgttaaa
      481 cgtaaatatt ggcggct
//
LOCUS       KCPA01002982             687 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 327949tic ultra-conserved element locus
            uce-4456, sequence.
ACCESSION   KCPA01002982
VERSION     KCPA01002982.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 687)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 687)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..687
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="327949tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>687
                     /note="ultra-conserved element locus uce-4456"
BASE COUNT          177 a          130 c          130 g          250 t
ORIGIN      
        1 agaaaattat ttcctatttt gcataaattt tttgcggttg cttttttccc ttctcgctgt
       61 gtcacattag acaccctggt tatcaaagtg atcgtatcgc tatggtatgt ctcataatta
      121 tgatcaaact gttatctaac attcctggag cattcttttt ttcagtactt aatacctttt
      181 attccttggc ctcatgcatg aattatgctg tgtatgtgaa gaggcttaaa gtttgtttcc
      241 attacattct ttctgaatgg atcctgttgt atctaggatt tttttaaagc caagtaggaa
      301 tgttattgtt gaccttgaca ccagataact gggcagacat tatatagcta tgtttgaatc
      361 ctcacaaaat gtgatgctaa agccaacaga atcctggcgc gagaccctcc tggacagcag
      421 agttatggag cttttcttta cagtaagttt ctttcttcaa ctttcatagt ccagagggaa
      481 agcagctcct tcctgttcta aaactgtctt gtcggactct tccttttgca tcaggtagga
      541 ctgattctgt tcacttcagc ttgcttatag aagcagaggg tactgaattt gtattttgcc
      601 tattaattgc tttaaattga tgacctttaa tactttgtac tcgtcagaca aaagtgagca
      661 cgatgagcag tagtatcaga taaggtg
//
LOCUS       KCPA01002983             542 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 328060tic ultra-conserved element locus
            uce-3488, sequence.
ACCESSION   KCPA01002983
VERSION     KCPA01002983.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 542)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 542)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="328060tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>542
                     /note="ultra-conserved element locus uce-3488"
BASE COUNT          155 a          150 c           94 g          143 t
ORIGIN      
        1 tgatagggag agtctctgcc atgtcccctt gctctgacac tgctagaatg gggcctgctt
       61 ccctcttaat taaaatgtat taccttccac aagactccac tattttaagc taaaatttac
      121 atcttttatt aactcacctc acctatacac ttagctctga tgcctctcgc cgcccatctg
      181 ccatccacat acagtgagtc acttgatatt ccacccacca atttttccta acaaccactg
      241 tgcaattaaa ctcaacacgt tctgttgcga ggtaaattag gcacacctgc ggccagcctg
      301 catttgaacc gcatcagaaa aggacctaac aaggtgagag cagtaccaca aagttatagg
      361 cctgtcaagc aattaggttt tcacttctgg gacatccgca cagtgcaatt atgctacaca
      421 ttacaacctg gctaatcttc tgaacaaatg tcatgtctcg gagaagcgag gaaaagcagt
      481 tcatctgcaa atgtggctgc tcctaagcct ccaccttatg cacataacaa cctacaggag
      541 ac
//
LOCUS       KCPA01002984             565 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 328169tic ultra-conserved element locus
            uce-7739, sequence.
ACCESSION   KCPA01002984
VERSION     KCPA01002984.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 565)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 565)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..565
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="328169tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>565
                     /note="ultra-conserved element locus uce-7739"
BASE COUNT          156 a          142 c          102 g          165 t
ORIGIN      
        1 tgccctccca tcctcaggca gaagaaatcc ttctctcctc ccgtcccttt tttggagaac
       61 ccagactgga gccacagaaa ctttgcatgt tcgcaccatt tgttgatatc ccctgcctta
      121 cttttgcaga ggcactcggg gaacgtctgt ttctatttga aaccgtcaaa attagcattc
      181 agtaattaaa aatcacaccc tttctcttaa taacctaacc agcatgatac aatcaggttg
      241 tgccaactct ttaatctaat tgactaatta cagattttaa tttagtcagt tactgaacaa
      301 ctgttgacaa tttgttttca ttagggacag aacaggataa atatttaggc tccccagtca
      361 aagactaaga cataagctct gggctctgac ctccagtttc acaatggagc cttctccaca
      421 agcatcaccc gtgcaaaggt gctgctctga aatgccctgg tcctgctgcc caggttattc
      481 tgtctgaaag ccaatgtgtt ttataataaa atataatcca tccttacatg gtgctccagc
      541 aagagcaggc tttactggga gggac
//
LOCUS       KCPA01002985             758 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 328280tic ultra-conserved element locus
            uce-1643, sequence.
ACCESSION   KCPA01002985
VERSION     KCPA01002985.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 758)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 758)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..758
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="328280tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>758
                     /note="ultra-conserved element locus uce-1643"
BASE COUNT          183 a          170 c          207 g          198 t
ORIGIN      
        1 ggtgatgtca gaccgcttgg gtcatttgaa ggttagcagc ctgggaaggg ttcacggaaa
       61 gttcactcgc atatattagg caattcaatc tttcattccc tgtgacacaa gtagtaggaa
      121 gtgagctgtt cagaggcaga agcatctatt cacggccgag ggggatcccg agcctccaac
      181 ggagctgttt tatcccgggg aggtgggcga ttggcacggc gtgggacgcg gcacacaccc
      241 ggcgagcgcc ccaggagctg gactgactct caagaaattt tttgatggta gctaaaactt
      301 ggaatgcggc tcgcatcccc ccatcttgct ggattggctg ggcagcctgg aaaatggtaa
      361 atgatcattt ggatcaatta caggctttta gctgtgttgt ctgtcataat tcatgattct
      421 ggtctgggaa aaagaccaac agcctacgtg ccaaaaaagg ggcagagttt gatggagttg
      481 ggtgtacttt tatgtgccat tttcctccac acctagagga aagcactttt gcaggcattc
      541 tgtgcagggg gaatcatgtt tgactgtatg gacgttctag cagtgagccc tgctcagatg
      601 ctggatttct acactgcgag tccgtcttcc tgcatgctcc aggagaaggc tctcaaagca
      661 tgcttcagtg gattggcaca aacagagtgg caacaccggc acagtgctca atgtaggtcc
      721 caactgttat ttttccactt taaagcaatt actattat
//
LOCUS       KCPA01002986             522 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 328385tic ultra-conserved element locus
            uce-7299, sequence.
ACCESSION   KCPA01002986
VERSION     KCPA01002986.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 522)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 522)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="328385tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>522
                     /note="ultra-conserved element locus uce-7299"
BASE COUNT          167 a           79 c           87 g          189 t
ORIGIN      
        1 aagttggctt gataaacccc cattggtatc ttcagggaac aagtagatta aacaagtaat
       61 tataccataa ggcttttaga agttagtaga tttaaataca ttgtatgaat ctcatcttaa
      121 tgtagccttt tgtctatagt gcttcctgcc aacctcctga caggaaataa acattaaaat
      181 aatctttaat cccttgtctg gtctattacc attaacaatt gatgcacttt aattttgtgg
      241 gattttaact acaaaatgga atggctaagt agtgataatt gggtttggaa ttatacggtc
      301 atttatatca acagaaatgc aagtggctgg gagggtgatt aattatttaa catttcctgg
      361 ctgtagttcc tattatagaa ttttctgata tattctgctg tgaacaatta tcaccaaatg
      421 aggataaaca aatctgtgat atgaagtcct atttataaat taaactatat ttagaaaatg
      481 tctgtttcat ttgcattttc cctttctgct tgacagtact at
//
LOCUS       KCPA01002987             727 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 328499tic ultra-conserved element locus
            uce-3703, sequence.
ACCESSION   KCPA01002987
VERSION     KCPA01002987.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 727)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 727)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..727
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="328499tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>727
                     /note="ultra-conserved element locus uce-3703"
BASE COUNT          180 a          119 c          153 g          275 t
ORIGIN      
        1 gtcttaataa ttgtactggt ctagtttcta catgaataga caagggtgaa cattttcagt
       61 ggctggtgga atcttaactt ttcatgattt agtacaacaa atactatcaa aagtgcccca
      121 cgactgacgt tccattgatc aagattcaaa gcaaaacaag ctgtccaatt cagaagtagc
      181 taccaactac actgtttggg cctaacaaaa gaggtgctat agcagtaatt ttcttttatt
      241 tgcttgatca ctggaatttt gttaatttga atgcatgtct ttcacttaat tgggtcatgt
      301 tttttctaaa atttaaattt ttcttcttcc tatagccctg ccataggaca ggctgaggca
      361 gagtctcagt gttgccctgt tcagtctgag gcaagtggga tttattttat tcattctggg
      421 ggctttcaca gctttatggc tgttggatat ttatgtcccc aaacttgcag caagtttggt
      481 gaaggcccct acatttattt taatttagga ttctcttttg gtagatgggc tctatatttc
      541 tttttattat ttttaagagt caaggggagg gaatttaaga tgtgttagct tttctcttaa
      601 tggaatgcat ttccttcgag gctgctgagg tagtccttaa gccatgcatt gcatttgtgc
      661 tgtatttgtt tttgggtttg gtagtgttga ttttgtgtag tctctgaatt agtggcatgt
      721 aaatatc
//
LOCUS       KCPA01002988             689 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 328612tic ultra-conserved element locus
            uce-2163, sequence.
ACCESSION   KCPA01002988
VERSION     KCPA01002988.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 689)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 689)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..689
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="328612tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>689
                     /note="ultra-conserved element locus uce-2163"
BASE COUNT          193 a          126 c          147 g          223 t
ORIGIN      
        1 tccaatcgaa attttaaact gatctttctg tagcatttac actgacgagc aagtgggttt
       61 taataattta cccatgttgc tgcaaagagg cggggaagga ctgcaagttt aaaacacaaa
      121 ggagaaaagt taatttaaag tgatgtttgg taaaaagtcc cctttgagat cctgttgtgt
      181 aattgaacag attaagagaa ctgacagtaa cttcacggta tgcctaagtg gaggtctcta
      241 cgggtcagct ctcggatctt gtgccgacac gttaaacaag tttgtcaatt ttccatcaga
      301 ttgatttttc tcacaggtct ggaagcctcg tctcatttca tcttatttcc acaggggtcc
      361 ttaacattgc aaactgccat ttacttttgt ctcaaagtgt gaggaatgat ttttatctct
      421 gagtggcaat cacggcaggc agctctagca ctgcttataa tgttgcacat tgtcctccct
      481 caccaactgg ggtttctttt gtgtttttcc cctctttggg aatgatgtgg atttttagaa
      541 tacattcaaa ataattatta acagaatgta cttagggcag atgtctgtag tctctgaagt
      601 gaacaaaaaa agcaacagaa accgtggggt tttttctttg cagttttcag cataatgaga
      661 ggtcagcttg agaaaatatg atgtctctg
//
LOCUS       KCPA01002989             622 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 328722tic ultra-conserved element locus
            uce-7102, sequence.
ACCESSION   KCPA01002989
VERSION     KCPA01002989.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 622)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 622)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="328722tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>622
                     /note="ultra-conserved element locus uce-7102"
BASE COUNT          183 a          105 c          126 g          208 t
ORIGIN      
        1 aaagaaatgg gggcttaact gaggggtaag cgtggggtct ctggagcttt gcaaggcact
       61 gaaccatgca gttacagctg tcctccaaac aagcccaaca ttctttattt atttgttatg
      121 aaatatttat ggatgttatg aaaggtttaa aataattctc tctctcccct cttatttttg
      181 ccctggcaga gtgttttcta atgcataaat aattctggcc tgtggacagt gggacagcac
      241 attaggtggg atgtatccgc tgtatcacat tctttctgcc tgagagaaaa tatcattcct
      301 agtaattttc tacacttata caatctgcgt tgacagtaaa taattgatgt atgaatttag
      361 gactaaactc caacacaata tgactttatg tcaagggtta ctcccagcag attttgagct
      421 aaatcatctt gcaaaatgga ttctttcagt ggaaaaagga aaaagctttt tgaaattatt
      481 ttaatggaaa gatggaacct ctgcatagtg cttcttttga tgaggtcttg ctttgcatgg
      541 ctggtaataa aactgagcaa tctacccatt atgagattgg aaatgtttca tttgtgatca
      601 caaatggatt ttttagattg ac
//
LOCUS       KCPA01002990             485 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 328814tic ultra-conserved element locus
            uce-6627, sequence.
ACCESSION   KCPA01002990
VERSION     KCPA01002990.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 485)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 485)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..485
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="328814tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>485
                     /note="ultra-conserved element locus uce-6627"
BASE COUNT          147 a           83 c           98 g          157 t
ORIGIN      
        1 tgtgtgtgtg tgttcatgca caggcttagt cctcaggtgg aactgtggtt cctgtgcttt
       61 cgttctcgaa gctgttattc tggaagggaa tggaggcagc tgtgtttaca gctcaagtct
      121 tggcatacat ttaccagaat ctattattca tatcgttcag tatcagggag agatctcagg
      181 ccacctgtct atctgacaaa ttcacccttt tgtgagcttt ctgttcatag caaattatgt
      241 tcacattgat gaattgagtt tttatgagca ttgctaacta acattctcac agaaggccag
      301 gggcaataga ctgcaagtgt ttctggtcca caagtaaatg ttaaaaagct gccagtattt
      361 aaagacaatt tgccatggag ggatagttaa aatatttggc aaagccttga tatttataaa
      421 ttcaagaatg tccataaatt attacagata gtatacttat cacaaataaa aaataaaaat
      481 aattc
//
LOCUS       KCPA01002991             719 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 328923tic ultra-conserved element locus
            uce-6966, sequence.
ACCESSION   KCPA01002991
VERSION     KCPA01002991.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 719)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 719)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..719
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="328923tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>719
                     /note="ultra-conserved element locus uce-6966"
BASE COUNT          209 a          142 c          133 g          235 t
ORIGIN      
        1 gaagtgtttt gtcaagagtc tttatcctgc tatgtccttc atatcccttg gtattaataa
       61 acaccattaa taagctaaag agaagtgact gatgcattcc acattattat taaattgttg
      121 gtaaccaagg caggtatgtt ggttaggctt cttttccatg ggggatgaag agggacctgt
      181 tcctttttaa ccacttgctc tggatgactt ttatacccaa tataagcgag aaaagaggat
      241 gaatgtcacc tctcttctct ttctcctcct gtcgatgcat actccttctt ttgattgaca
      301 gctactaata accttcctgc cctaagtgcc atggagacac tttattagga caaacagcca
      361 aggaaatcta ggaatgaagc caagcctgca gtgagttatt atcgggcttg tatttatctc
      421 agctttgtaa gtgatatgca aatcctgaaa tagatcttct tctgttgaag gacaggtccc
      481 tctgttaatt gatccactga gattcagcct aacctctttt agctatcagc cagggaaaca
      541 ggctacataa aagagtctca gtgctgtata cagttcacat aaattcacag tgcattctac
      601 aaggaaaact tccgcacaaa aaatgcattt ttagttcctg aacatatttt acatatcagt
      661 gttatctgca taacagatca aactgatttg tttatttgtt tattagatat gtatgagga
//
LOCUS       KCPA01002992             771 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 329035tic ultra-conserved element locus
            uce-953, sequence.
ACCESSION   KCPA01002992
VERSION     KCPA01002992.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 771)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 771)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..771
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="329035tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>771
                     /note="ultra-conserved element locus uce-953"
BASE COUNT          261 a          159 c          112 g          239 t
ORIGIN      
        1 agtaaactca gctttgacct aagaaacacc tcaaggcatt aaaatttcaa caggcaatgt
       61 cagtgttaca ttaaacaaga actcctccag ttcgctacag agctgggatt tgaataaaac
      121 gttcaatgtt aacaaacaat acacacgttt ggcactttgt gtattaaatg gatcaaagag
      181 atttgataag gcacaataca ccatttgtac agacctgatt gagttaatat aatatcagca
      241 aattttacaa cgaaatgaat ctgtttcttt tctttgtgtt taaaaccagc acagattaca
      301 aattttaatg atctgaaaat gtttggtata caaaatcatg cttatttcag tattagcaaa
      361 aacacaagaa atttttcaac acaaacaccc agctgtgtct attttaaaag cagttcaatg
      421 acagcttgca cttatgagca tgcaatcagc taatttcgct tttttttctt ctgtgttaat
      481 caacactttc cttcctgcat atcagagtac aaatagtata gttactccac atcagtaaat
      541 gtttatgtaa cctgtccttt ctcaagaatc tggttacacc gaatcattac atgctagacc
      601 gagtaggaaa acgcactggg cccagccacc ctaatgggtg caccataatg acacatatta
      661 gttaatgatc atcataatca taataatatg caggaagctt acctttcctc ttaccccttg
      721 ccatggtaaa gtcatataat atcctcctca ttgcactctt cttcaagaaa t
//
LOCUS       KCPA01002993             589 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 329144tic ultra-conserved element locus
            uce-4788, sequence.
ACCESSION   KCPA01002993
VERSION     KCPA01002993.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 589)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 589)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="329144tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>589
                     /note="ultra-conserved element locus uce-4788"
BASE COUNT          181 a          103 c          113 g          192 t
ORIGIN      
        1 gtggctcagg gcagccacct tctctccaca cccccgctcg gctgcgggac atcaaggcag
       61 ggccgaccga cggggttaat taggaggctg aaattataat gttgtgttaa agaacaaaga
      121 gtctccaaag gaaaaatatg tgccgcatat ctgacaaaga taaattggat tattcaaaat
      181 attcctgatg aaatgttaca ttttgcaact aattatcaat ctgttttatc tccggaccag
      241 ctgggcattt ttgtgcatgc aagacctgcc ttaccaatga tcttaagatg tcactgtagc
      301 gtttacatct tttatttcaa gatttaaata actaggaagt agctaatgta attcactgct
      361 gagaagaaag gctagttagt tgaatgcttt ccaaagtgat cttctcctaa tgaacttctc
      421 tggactgtga gtaatgaggc tttattcaaa taatgtttaa gaaaggtttt tataatgtaa
      481 ttttttaaag aaagagcaac atttaatgca tttaaaatat ctttattaat cctatactgc
      541 ctcatgtagc attaaagcat tgtgaatatt tggttttgtt ccttctgaa
//
LOCUS       KCPA01002994             683 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 329255tic ultra-conserved element locus
            uce-1034, sequence.
ACCESSION   KCPA01002994
VERSION     KCPA01002994.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 683)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 683)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..683
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="329255tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>683
                     /note="ultra-conserved element locus uce-1034"
BASE COUNT          194 a          147 c          109 g          233 t
ORIGIN      
        1 aaggcaataa taatatttca tatatgaatt ccagcttagg agctcaacaa agtgaagtca
       61 cggttattgt ttttttgctc cttcacagag cttttcaaag gcactcactt ttgcataagt
      121 tgtaagttta tgctaaagtc ctgtgctagt gtgtgctaca cgttttagtg tgttctgaac
      181 tgccctggga gctaaccccc ctcctccaaa gaactctttc tcagcccctt catctgtaac
      241 ctttctgcaa gtaaatgcta attgaaaaag aaagaacacc actaatcttg gaatttaaat
      301 gcatttaaca aaaccaatct caatctaaat tgttgtttca ccattccctt ttccccaaca
      361 gatgtcgaga aactgcaatt cctattaaga acacttgact gtttactcag caagagaact
      421 tcaggctcag gctgcatcaa tctaaatgca tttcaggacg tcagtctttt gaaaagtgca
      481 gactgttagt tggttatttt taaatgtaat cttcacataa aagagttgct gcatttttct
      541 tttcactttg tcatccatct ctccctcctg ccatgataac atcaaacata gatgtcctga
      601 attgttatgt cccattccgt ttagttttat ttcatttttt tttttgacca atggaacagt
      661 ggagaccgtg aacattatta cgg
//
LOCUS       KCPA01002995             775 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 329367tic ultra-conserved element locus
            uce-8044, sequence.
ACCESSION   KCPA01002995
VERSION     KCPA01002995.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 775)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 775)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..775
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="329367tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>775
                     /note="ultra-conserved element locus uce-8044"
BASE COUNT          249 a          133 c          176 g          217 t
ORIGIN      
        1 gcacaaaggc agctccccaa cgaattggtg acaagagtaa aaaggcaatc tagcctgtgc
       61 aagctttaaa tgcggtctga attttacaat tacatgtcct aaagcccatt attagacatg
      121 agggcgatga gaaggaaagc agtcattgca tcactactaa caccaattat aggaaacata
      181 aatcattcaa atttttgtac tttaataaaa atcagcctga attggtgaaa aggaaggatc
      241 tagtatagga gcctaatggg atagaagaaa atagagtaat tggaggctgc tgtcttttca
      301 ctttctatat aaaattattt gaagagacag ccaagaactt taaacagcag aaacccggaa
      361 aagttgtaat ttggatgtct tcagttgtga ctttaatggt gtttgcttaa agagctttct
      421 tttatctctg cagacatact tcaatgacaa tatcctcaca ctgatacgga cattggtaac
      481 aggaggagcc acaccagagc tggaagcact gattgctgag gaaaatgcat tgagaggagg
      541 ttacagcacg ccccagacac ttgcaaacag ggacaggtgt cgagttgctc agttggcttt
      601 gtatgatggg ccatttgcag acctaggggt aagatcatga gggaagtgta ggaccaagac
      661 tggtctgtgc tcttttctct caggctatct taataggcat ataatttcta ttattgaatt
      721 taatagagtt ttgggattgt ttaaaaattt atagcacaga gtgccaggtt tgctc
//
LOCUS       KCPA01002996             248 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 329470tic ultra-conserved element locus
            uce-3714, sequence.
ACCESSION   KCPA01002996
VERSION     KCPA01002996.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 248)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 248)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="329470tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>248
                     /note="ultra-conserved element locus uce-3714"
BASE COUNT           48 a           66 c           49 g           85 t
ORIGIN      
        1 ttttttctct ccaagtgagg actaatccca tccctgggcc tgctctctgt tcccttcctg
       61 cattagagat tggctataag gagaaggctg acggctgcag catgaagcgc attattacct
      121 tgtgattcca tgaccctcct ctatgcatcc ctaactctcg aaagctgatt cagctttcag
      181 ctagtgctct ggtgagtcct ctgctgcaac agaagctcct aactggtatg tcttcttttt
      241 tttttttt
//
LOCUS       KCPA01002997             418 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 329574tic ultra-conserved element locus
            uce-2926, sequence.
ACCESSION   KCPA01002997
VERSION     KCPA01002997.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 418)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 418)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="329574tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>418
                     /note="ultra-conserved element locus uce-2926"
BASE COUNT          122 a           74 c           68 g          154 t
ORIGIN      
        1 ctcattgcct ctatcccttt ccactttggg attgctgtaa atgcctgatc aaattatatc
       61 tgctgctctt tagaaccacg ggataaccga tgaggcttct cacatcagtg tttctttatc
      121 ccttttagaa gtattagagt ttgacattgg atgactttat aaaacattca actaattgga
      181 tttgttaaaa taaataaatc aaatactaat tggaatgtgc cctgccatta tttttgctta
      241 ctgaattaga tattatggcg tgaagttctt tttatcatat ttgtgcactt atttaaacac
      301 tctgcaaatt caattatata ttcaaaggag ctattccatt tatgcaaggc tggtttacat
      361 ttaatccagg ggcaagtctc agtaactgat gataggtctg ctcaagatta attagcat
//
LOCUS       KCPA01002998             575 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 329681tic ultra-conserved element locus
            uce-7788, sequence.
ACCESSION   KCPA01002998
VERSION     KCPA01002998.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 575)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 575)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="329681tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>575
                     /note="ultra-conserved element locus uce-7788"
BASE COUNT          197 a           95 c          124 g          159 t
ORIGIN      
        1 actttatcca ggctctatga tgtacaatgt cactgtagca gagcacttcc tctttgttct
       61 gagagaactt gattcataat gagcccatct agagtgtact cagattgtga taaagagctt
      121 tacacagagg ctccaatttt agagaaacag gtgttggctt tgattagaga aaattacatc
      181 attcaaggga aaggaaaagc aaagggaaag gaaagcaaaa atagaaaaaa gtagcaacca
      241 gacgcaaata catttgcaca tataaagctg ttctaatgaa agccaaattg atttgacatt
      301 cagtggcagt tcgaagccaa aaaaagcaaa gcagcctaca aaaggcccag ctcattgttt
      361 atggagtgtc atacttcatc atctgtgaga ccaataacag tgatgggaag acctttaaag
      421 cagggagttt gcactgaatg gctgtgtgga taccactgat gtcagatgca gtagaatgat
      481 tgtgagctat ttcctgaact gaaatcatgt ttgtcagatg ctctctacag attatatctt
      541 tgagaatagt atttagtata ttgttagaaa tcttg
//
LOCUS       KCPA01002999             592 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 329793tic ultra-conserved element locus
            uce-1622, sequence.
ACCESSION   KCPA01002999
VERSION     KCPA01002999.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 592)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 592)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..592
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="329793tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>592
                     /note="ultra-conserved element locus uce-1622"
BASE COUNT          172 a          147 c          146 g          127 t
ORIGIN      
        1 tgttcctgca aagggaggag ggccaaggca gcagacaaat gccaggtcca tgtcttttct
       61 aaactactga gcaaaagtaa caaagtcaaa gcagaatcaa atttcaaatg gacaaagagt
      121 aaaacatctg ttacacgaag gggggaagca gcttaaagac tgagctaagt gaatccttta
      181 gtaacctccc ttcagggaaa ggaaatctga ccccaggaaa taaataaaag tcacccaaaa
      241 agtgaacaaa agaggtgttt gccccaacac cattcatcgc cgctaacgac ttgttcatta
      301 tgagtgatga tggataaaga cttctcacgc tgagatgaaa tcaagattta tatgcattgt
      361 ttcctctccc aacttgtggg aagatcatca tcatttaatt ctatctctgc ggccagtgat
      421 gggcatccag agagctggtt atcacacggc gcagtcagct ggcaagggcc ggacgtgccg
      481 ttggcacatc tggacggagg cgccgcagcc ggggctgagc gatggctgct ggccaccctc
      541 caaatggctg cagactgccg gggctcctct ccacccggca ctgctcctct cc
//
LOCUS       KCPA01003000             500 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 329904tic ultra-conserved element locus
            uce-3808, sequence.
ACCESSION   KCPA01003000
VERSION     KCPA01003000.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 500)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 500)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..500
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="329904tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>500
                     /note="ultra-conserved element locus uce-3808"
BASE COUNT          139 a           95 c          117 g          149 t
ORIGIN      
        1 gaaaaagaaa cagacaagaa ggagaaaaga tggggaatag ctgggattat ctctgtgctg
       61 tctctcaggt ccagtgacaa cacgactaca atgggtagct ttcaggactg catatggtct
      121 tccttccgag ggagttgatt aagcgactcc ggatgaaatt gaaatcctgt gatttgacct
      181 ttgtctggcc tgggaggact gcaattcgca taacaatttc cttttgttct ttgtttggag
      241 ttattaatcc aacatgagcc tcgaattaat caggggtagt gcgttgttac atttctaatt
      301 cacagctccg ctgcttgtgt cttttttaat taaggccgaa tgatagcagg ccttagcccc
      361 tgattgcaac acttactaac cacacattga gggatgaaga ggctaaatag gcagaatgag
      421 attacttcaa ggtttcgctt aattgttttt tcctttaagt aaagagcact gaatgaacat
      481 tgttaatgcc aggctgccag
//
LOCUS       KCPA01003001             551 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 330005tic ultra-conserved element locus
            uce-7094, sequence.
ACCESSION   KCPA01003001
VERSION     KCPA01003001.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 551)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 551)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="330005tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>551
                     /note="ultra-conserved element locus uce-7094"
BASE COUNT          141 a          122 c          126 g          162 t
ORIGIN      
        1 caggctcagc ttttccaggg ggaagctggg caggtcttcc tttgggcatg tctgccgcca
       61 ggcctcaggg aagctctggg tgggaatgct ggcaggtatc ttgcggtacc gggtggactt
      121 ccagggcatg gaataccaag gaggagacga tgaatttttt gaccttgatg actactaggt
      181 agtcgagctg ggtccggcaa cacgtgcctc gcccctccag catccaaccc aaggagcaaa
      241 ctcatggtgg aaaacacaac agatccctgc cttagaattg gaacatttcc agaacttgat
      301 ccacgagcat ttggatttgc aaaaccctac actttgattt gtcatagtgt cagtactaag
      361 ttcctatatg ccacttcgga ctaattgatc ccagttttta cttttactca atggtgaaat
      421 tggttgctct tgtattttat ggaaatgatt tttttaacct tcatgataca ttaactgctg
      481 taaacctctt ccaaaattaa tagaagtaag atcctatttc tttacacttt gattggagaa
      541 atcaattgct g
//
LOCUS       KCPA01003002             697 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 330115tic ultra-conserved element locus
            uce-7133, sequence.
ACCESSION   KCPA01003002
VERSION     KCPA01003002.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 697)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 697)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..697
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="330115tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>697
                     /note="ultra-conserved element locus uce-7133"
BASE COUNT          226 a          123 c          138 g          210 t
ORIGIN      
        1 ataaagcacg aaggaataat catagtcatg tctctctggt attctgacaa ttgcaccctg
       61 ttctaaagca gtctcatgta aaaaatgact gtagtcgtca actgcacaga tgagggaaac
      121 gtccatgcct gtgtcagtca ttttaatgag tcacaggagg agggaaagtg taggaacaaa
      181 ttaaacacaa cagcccccca acaaaagaaa gtgagaatag ttacaatttc atttgctttt
      241 aaagcacagc acttgggtaa taaacgtccc ctgcaaatct gctgagcaaa cacctccgca
      301 ttcatcaata tgcgggagct gtttattgcc tcataaactt ggaagcaagt gatattgtct
      361 cctaaatcaa tggttgtgtg gacatcctag gcactgtagg agaacagtac atccagacaa
      421 tgctgatact taaattaatg gttctagtaa tgactgaaag gcgctttgtc actaaaaaaa
      481 gttagaaata gattaaaagt atgcctagga cacaatgtat atatgttgtg acagggatgt
      541 gtgtatgtat gtgtctcgtt acagttttta ttactttggc ataaaaacta ctactccatg
      601 cagttttgat ttaaatgtgg gttgagctgc caatacttta agcttagttt atgtttttct
      661 aaatctgttt agctttatca atttcttaaa gaactaa
//
LOCUS       KCPA01003003             628 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 330229tic ultra-conserved element locus
            uce-317, sequence.
ACCESSION   KCPA01003003
VERSION     KCPA01003003.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 628)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 628)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="330229tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>628
                     /note="ultra-conserved element locus uce-317"
BASE COUNT          143 a          128 c          147 g          210 t
ORIGIN      
        1 gtagacagca ctttagccta aaccagatgt gcgaaagaga gctcctaaac gttttttatt
       61 tgtgtgtatg tgtttgtgta tgtgggagat atttttggtt cctgctaggc ttctttgcag
      121 caaagcccct ttctagaatt tactttcctt tattagagtt gcagctcggc tttgtgcggg
      181 cctctggggg ttttggccag ccgttggcaa tttctctcag acacccaatt acccctgacg
      241 tcaatgccgt ctctcccatc tcccttgggt gcccacattt tttcctttgt aacactaata
      301 gctgactagc taagtgcctg ttatttcctt ggcagaagat ttgattgtgt tttgggccgg
      361 atactaaatc caaaaactat gtaaaaatgt caataggtga gtgcacattg atttcggtta
      421 gtcacagtga tatttgagcc cctttggggg ctctgtctgg ggaagtattt tacaagaaag
      481 ataatataac agaaaattac tggagctgca caggtctctg gtggatttct taggggcctg
      541 ctaagtttct gtagaatcaa caaatgcttt attaatctaa atttgcggtt ttgttccgcc
      601 tctcttcaga cggctggagg aggctcgg
//
LOCUS       KCPA01003004             372 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 330337tic ultra-conserved element locus
            uce-3842, sequence.
ACCESSION   KCPA01003004
VERSION     KCPA01003004.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 372)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 372)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="330337tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>372
                     /note="ultra-conserved element locus uce-3842"
BASE COUNT          140 a           73 c           47 g          112 t
ORIGIN      
        1 ttctccctcc caataataaa aattattgag tactctaact acagttcaac aattgaatca
       61 atgtcacttg tttgcaacct gttttgtaaa tactttatcc ataacgaaag atataaacat
      121 gcaaaaacct gaatccatag tccaaataat acatacacgt gttctgaagt ttctgcactt
      181 ctccacagac tatgccaata aaacattatg tacacatacc attttttaca gtgaagtggg
      241 aaaaaaatac tagaaattaa aacgtgtaca tggattaaga ccaaaaacat tctagcgtaa
      301 gatcaattct gctacaaact ggtgatatga aaactccctt tatttgcaac cagctgcata
      361 agttttagaa tt
//
LOCUS       KCPA01003005             652 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 330446tic ultra-conserved element locus
            uce-7848, sequence.
ACCESSION   KCPA01003005
VERSION     KCPA01003005.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 652)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 652)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..652
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="330446tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>652
                     /note="ultra-conserved element locus uce-7848"
BASE COUNT          219 a          103 c          121 g          209 t
ORIGIN      
        1 tcatgcctac tgcactcaag tgataattaa tatagtctaa ttccagacat gatgcctgaa
       61 ttcatgtact gtcatcaata ccccatgtta aaatcaaacc ttgacaggga cttaacaccc
      121 tggaacaggt catcatatga taatactccc tttcagtatt tgtcttcaac caagcaaagt
      181 attacaagat gagaaaaaaa gggaaagaat tacaaatgaa gagtgacgca ggctgtgaat
      241 agaacatatg ttaggctagg cagaggcatc agtgaattat atcatttcat gatgaagtgg
      301 cagtggggct gaacggacct attttaaacc ttgatgtatt ttatctctac tgtatttggt
      361 ctgtcatctt tggagaaaga ctttgtgtaa ttgagagtca gctccaatct gcatgacttg
      421 agcatgaagt gtaagccaga tgaacagtgt tatggaagaa aggaaagcat ctaataagat
      481 ataaatgaga aataaccttt atacctcaga catttaaatg tgttatactg tgtttaatgg
      541 tattattttc atggtactat ttaaacaagg tttgaaagtt taagtttatt tttttacttc
      601 attattttag taaaacctgc atatttacag atcctttatc acattgagca ta
//
LOCUS       KCPA01003006             716 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 330555tic ultra-conserved element locus
            uce-7073, sequence.
ACCESSION   KCPA01003006
VERSION     KCPA01003006.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 716)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 716)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="330555tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>716
                     /note="ultra-conserved element locus uce-7073"
BASE COUNT          250 a          122 c          182 g          162 t
ORIGIN      
        1 agaggggagt cttacaggtt tgctgagaaa atgcttcttt cagaaaagct agatgtgtct
       61 cattctgata ctgaggagtc agttactgac catgctctac cccttagtgc agagttacag
      121 gggactgata aacgatgcag agaaaaagta gctactgccc ccaaaaaaga gattctctcc
      181 aaaatctata aagatgtatc tgaaaatggt gtaggtaaaa tgtctaagga ggatcattat
      241 gataaagtga cagtgttaca ctacactgga gatgttagta gtcacaaaca tgcaatgtgg
      301 atgcgcttta ctgaggacag attagacaga ggtagagaaa agttgattta tgaagacagg
      361 gtggacagga ctgttaagga ggcagaagaa aaactgactg aagtatccca gttttttcgg
      421 gataaaacag agaaattgaa tgatgagcta cagtctccag agaaaaagca gcataaaaaa
      481 aatggcaagg aaatacattc tagccagagc tctgccagca gcagccctga gaaagttctg
      541 ctctctgaat tgccatcgtc tggggatgaa tggagtaagg tgaagcagta tgcacacgat
      601 gggaagtgct ttcccaaggt ggatgaaaga aaagcatcca gtttgcccag cagtcctgaa
      661 aaaaggatat atgtgcaacc tgcagaggac tctaaacgaa ctatggaaca caaagg
//
LOCUS       KCPA01003007             647 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 330668tic ultra-conserved element locus
            uce-6942, sequence.
ACCESSION   KCPA01003007
VERSION     KCPA01003007.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 647)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 647)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..647
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="330668tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>647
                     /note="ultra-conserved element locus uce-6942"
BASE COUNT          229 a          101 c          120 g          197 t
ORIGIN      
        1 aaaggctctc taatatgagg gaataccagt aaaacagtga tgaaaaccat aggtacgaat
       61 atctgaaagt ggctcacatg aaagcattta ctgcttttca tgcacatgta ttaaaccata
      121 gtggaaagga gcctttcact gaaaatacat taattatttg acactggttt tcctcagagc
      181 tatgggatgc aagtgaaaga ttacagctga aaaaatgatc atcatacttg aggtaggctc
      241 acagaatctt ttcttatgtt ctgtgtgaag ttgtcttgaa ccgaaacctc tgctccttaa
      301 ggattaaggg attgaaaagc aaagactgaa gctgctgtaa tttaaaccca gccattctct
      361 agcacaaagg tgcaaaatgg actgagtcaa tctgcttctt tgctagttca cctaagaaat
      421 aattttacct tttgaaagtt ttatattatt aacattccaa agatgtcaca ggaaatttat
      481 tctcttgatt tttaaacatg agatcagagc catgagacat ggaataaggg aacgtggttt
      541 caaaaaaatt atatatatgt gatgtatatc taaatcataa agataaaatt aatcaatgaa
      601 tgtcactaag gtgggtttta aaaatatctt gaaattcttg cagagca
//
LOCUS       KCPA01003008             587 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 330773tic ultra-conserved element locus
            uce-1272, sequence.
ACCESSION   KCPA01003008
VERSION     KCPA01003008.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 587)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 587)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..587
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="330773tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>587
                     /note="ultra-conserved element locus uce-1272"
BASE COUNT          199 a           92 c          134 g          162 t
ORIGIN      
        1 ttaagtcatt attagaaatg acagggaaac ctgatgaaat tgtactttca attggaaaac
       61 aaaattgcaa tcagaccaac atgatttcct catggtctga ccatgctaat gccaagttga
      121 gacatgggca aatgtattta aaagtcataa tggagtatta ccatgcaatc tctttttact
      181 ggcccttatt aatataaaac ttcaatttgc atgtaaatgc ggtcaacttt catatcatca
      241 aaatacatga ggcctgggaa agtaatgaat tgaagtttga tgcagcaatt acggacgttt
      301 ataaagaatt ttaaagaggt cattctagcc ttggctgaga aaatgaggaa atcaacaggg
      361 aatattgtca atatagcaac agtgggagtt ggagtcagtc ccaggtgtta gaaggccaga
      421 tgatgattaa tagagaggga gtatgaagcc tttcacccag aaggactggg ctggacctga
      481 ggctcaataa cagaaatttc atgaaaaggt tcttgctggg ttcccacttt agctgcctcg
      541 aaatgtgttc cagagggaat aaagtagcaa gtgtttatga gagagag
//
LOCUS       KCPA01003009             349 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 330876tic ultra-conserved element locus
            uce-6058, sequence.
ACCESSION   KCPA01003009
VERSION     KCPA01003009.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 349)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 349)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="330876tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>349
                     /note="ultra-conserved element locus uce-6058"
BASE COUNT           99 a           65 c           67 g          118 t
ORIGIN      
        1 gaaaacttct ttccaacaag ctacgtaggg acataccaca tgttgcagtg attttagcta
       61 ttcctgttaa ccatgtacaa tatttaaaat aggcctattt tgatgtgttg cctattatac
      121 agatacacaa aacacttttt ggaggcctca gttacaagtg gcagagcttt ctgtgtataa
      181 tttgtctaaa taatttgtct aataaaattg ttttctaaac ttcctgttca attgcgtttc
      241 agcctatgga tactcatgga tttgctgcac tgctactgaa gggttgggat gagctcctca
      301 ggagtgagct cagtatggaa aacaccaatg tttaccacat ttgtcgatg
//
LOCUS       KCPA01003010             723 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 330985tic ultra-conserved element locus
            uce-1914, sequence.
ACCESSION   KCPA01003010
VERSION     KCPA01003010.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 723)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 723)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..723
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="330985tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>723
                     /note="ultra-conserved element locus uce-1914"
BASE COUNT          212 a          155 c          117 g          239 t
ORIGIN      
        1 tttttggaac taattaatta tgtcatgaaa gggagattcc ccaatcctca ctaatcttgc
       61 tttctggata acagggggaa atgaggaagg tgtttagcag tctcagttgt ctctttgagt
      121 caaaccacag aatgaagcca gatagcgcag atcaggcaca gactgcctgc tccgtttgtg
      181 ttttccctgc aagaatcagt ttcaaatatt aggtggattg ttgcaattag ctaagaaaaa
      241 tgtttcaaag ctgtataatt aaaggccagc attttattcg attttaaaat agcctttatg
      301 aaatctactc ctgccactgg taattacaat gtacatctta atacacctct gctaggcctg
      361 agctggagat aacagtcctg tgtgtattgc atttggcttg tgcatagaag gtaaaatcct
      421 ttatcttatc tcaatctcca aacaaccagc ctctcttcca attcagccct aatcttctta
      481 gtaaataata ctgatatttt tcaccataac aaaaatggag ctgccagatt cagactgata
      541 acacctctca tttacacacc attctctgtc aaaatctgcc tgatttttct taatctcttt
      601 aactcatctt ttttacattc agccatggta agttccttgc taccaaataa cattattata
      661 aataaatctg ttgaatacag ctgcctcttt gcgtaaatac tggaactccg ctctttcctg
      721 gat
//
LOCUS       KCPA01003011             808 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 331093tic ultra-conserved element locus
            uce-4605, sequence.
ACCESSION   KCPA01003011
VERSION     KCPA01003011.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 808)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 808)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..808
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="331093tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>808
                     /note="ultra-conserved element locus uce-4605"
BASE COUNT          245 a          141 c          206 g          216 t
ORIGIN      
        1 cacagcactg ttattcagaa gtagctttcg agcagagagt ttcaacggga aggtgctgtt
       61 tggttggaga caaatcagca aacgtgaagc gtgaataatt caagcgtgca tgaagagctt
      121 tctgaagaat gcaagaattc ttcaaacatt tgcatcagcc ttagaggaca atacaagaag
      181 caggattcga aacagattta cagatgcact ctcttgagaa tgctcattaa atgcaagatg
      241 cttctgtggc tcgtgggctt gcacggaggt agaggtttgc gagactgacg tatcagataa
      301 agtcagagtg gttaccacac cgacggtgta gcagctgcat aataaatgat ggagagaatc
      361 atgttaggca tgcccaccta acctaacttg aatcatgcga aaggggagct gctggaattc
      421 aaatagactt tctggttccc agcagtcggc agtaatagaa tgctttcagg aagatgacag
      481 atgcagggaa aagatgctgt tttgcactat cttgatttgt tacggcagcc aacttattgg
      541 catgatggag tgacaagaaa agcagctggc atggaaggta ggattatcaa agctattgca
      601 tcattatgaa tgtaattaga aactgaccat gacaaagcat atgctagaat gagctgtcgc
      661 agaggatttg ttgctgaggt cttgaaactc tgaaaacaaa attcctcgtg caaaatggat
      721 tttgcagttt catttgtgat tttctttcct gcttgcctcc aagctcggag aattgcttgc
      781 ttgaaagaga gtgttctgtt aggatgag
//
LOCUS       KCPA01003012             706 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 331204tic ultra-conserved element locus
            uce-533, sequence.
ACCESSION   KCPA01003012
VERSION     KCPA01003012.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 706)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 706)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..706
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="331204tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>706
                     /note="ultra-conserved element locus uce-533"
BASE COUNT          217 a          149 c          144 g          196 t
ORIGIN      
        1 ttgtgtggca ccatgcagaa atctgccaaa acaacacagt ttggtgctca ttgtatccta
       61 attaatacta taatgagttt ccttagatag ccaaatcctt aatcagccct atcaaaacta
      121 tgtctgttca gagaaagact cgtgttaatt ctgcttaatt cctgacagtg gttaagcacc
      181 attaatactc cataatttca ttgtatgtta ttgtaatcat atcagcatat atctcagcag
      241 ctacagaagg ctcaataggc tgttcatgaa ttatcagtca cgtggttctg tttcactaag
      301 agactatctt ccatcacagc cagacctcct ctgccctccc cacagtcagt agcctaagca
      361 ggtattaata aaggtctcct ttttaaaatt gcactgctct aaatggtctt taagggaccc
      421 agcagtaatc tcaagatccc tatattttag caggaaggca ggacagagga attaataaga
      481 gccctttctg tgtaaactgc tccctgctct aaggctatat cctgatgtca gggcgctaag
      541 agaattttaa atgcacagga tggattgttt gtgttgcgaa agcgaaacag ggggcaaagg
      601 ctaagagact tgagaaaatt gaaagactgc cagggatgct gggatgcaaa tagcaacaaa
      661 acagggataa atgctcctgc tcacatatgc aggagtcctg cagaag
//
LOCUS       KCPA01003013             561 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 331315tic ultra-conserved element locus
            uce-814, sequence.
ACCESSION   KCPA01003013
VERSION     KCPA01003013.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 561)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 561)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="331315tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>561
                     /note="ultra-conserved element locus uce-814"
BASE COUNT          157 a          135 c          122 g          147 t
ORIGIN      
        1 gggcgagcgg ggggcggcag ccccgggtgc tgagcccttc cccctgcctg cccgccgctg
       61 ctgtcagctc gctgcctgca ctttagctgt ctctttccca gtccctaccc tgtcagtttc
      121 tgggctgcca atttcaactt gaagcttgac tgggctgatt tgatgcaaat acctccaggg
      181 aaaaccctga aactgatgaa cagttatgtc aagtcgattt tgcaccatcg ggaaaaggta
      241 acctctgcga gaaaaaaaaa caacaaggtt aaagagacaa gggcttttca cgtgtaatac
      301 cactgctgca catctcgttc actgtttacc atccctcaga aattgtaact gtcagaatta
      361 gtcctaattg cagatgcgaa agctgccatt ataataaaaa cagaggcagt gcaggcatta
      421 aatgtagcag cctaatttgt gagactactg aaaaggtaga gtaaatgaat atttcattac
      481 tttaattacc agggactact cttttcttgc tgtcttatga taagtgttgc tgtaactagc
      541 aacagcaaac atccactaaa a
//
LOCUS       KCPA01003014             741 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 331427tic ultra-conserved element locus
            uce-2733, sequence.
ACCESSION   KCPA01003014
VERSION     KCPA01003014.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 741)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 741)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..741
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="331427tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>741
                     /note="ultra-conserved element locus uce-2733"
BASE COUNT          234 a          147 c          125 g          235 t
ORIGIN      
        1 atcaattaat ttgaaggaag gaaatgtgtg aaaggtattc tgcaaaacga ccataattac
       61 aggcacctta gttaaactgt ctccgaaaga gctaggactg catttgggag ctgcacgaat
      121 aacatttgcc ccacttatca tccattccaa tttaatattc ctagtgctac tgttgcctat
      181 atcatcaatg tcaaaaacta aaaagtctta tcttcaactt tcattccaat gcttcaaaag
      241 agctttgaat ttgcatctta ctctagggaa gatgtagttt aaaaacattt ttgcccagct
      301 tgctccatta atttctgagg aaaatgcacc tactgctgtg aatatgacag ttctcaacct
      361 tggtgttttt acaggatgtc cctccctagg gaacaaccaa caccattctg acttaccctg
      421 ctggaactgc acctcctgct gggtaatcag ctactgcagc actaagggag agacctcagt
      481 atgattaact ggatgcccct tgtgaatgct aaggaaaaag agatctgcaa gttttctagg
      541 gggaaaaagt gcttttagaa atcatctatt ttcaattcaa gcagctaatt tacagttgca
      601 tagagttgct caattaccag cagcacttag tattttatac atttcagtaa gctttaactt
      661 aaaataatat tcatcaatct atgaaatatg tttttcttcc aattatttct gtgagtcaaa
      721 aacaaaatta attttgtaat g
//
LOCUS       KCPA01003015             651 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 331537tic ultra-conserved element locus
            uce-5842, sequence.
ACCESSION   KCPA01003015
VERSION     KCPA01003015.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 651)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 651)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="331537tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>651
                     /note="ultra-conserved element locus uce-5842"
BASE COUNT          196 a          121 c          157 g          177 t
ORIGIN      
        1 ggtcagtatc agagacggtt tccaactggg caaaatacaa tattttccct ctgcttttta
       61 tgaatggctg gatagggttg tgctggagtc agagtcccct gtggaagcca ttcataacaa
      121 aacaaacacg tgcaaaaaaa ttttcaaggt ccagtccaaa gccactgggt gccagaggct
      181 gggaaaacac gccccagcta tcactgaaag tattcaaggg gctttttggt ggtctgaaaa
      241 gtatgaactg ctgtgtagaa gggcagctgg tagaattact gtgacacata ctaggcagaa
      301 agccgccttg tttcagacat tgtctttcct ctcattgaag tgtcaggacc taattcatgg
      361 aaaatatggt gagttggcag ctctttcaga atatttcatt gagagtgagt gagagtcaca
      421 tgaacatgag tgaacagcca aaaatatatg gggatttctg agctggagaa aacagtcagt
      481 ctcttctgtg gatttcatgt ggtttgtgag tagacaagtg ttttcaacag gctacagaag
      541 agctcaatga gttctgtaat tatgagagat tcctttaaaa caaatcattc cattgcagca
      601 agtgtccatt aatgagttca ctgcagtcca cctggagaag gcatcaataa a
//
LOCUS       KCPA01003016             778 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 331645tic ultra-conserved element locus
            uce-238, sequence.
ACCESSION   KCPA01003016
VERSION     KCPA01003016.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 778)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 778)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..778
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="331645tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>778
                     /note="ultra-conserved element locus uce-238"
BASE COUNT          186 a          155 c          161 g          276 t
ORIGIN      
        1 tctgtttcag agctcccttt gtgtgcagag tgagacccgg gtttctcagc ccctggaatg
       61 ctctttttcc atcgctgcta atagctgtgg acgttttccg tgtggatgtt cagtgcaggc
      121 tgttgtgaat cccaggatga tatcgccatt acttagagct gtattttgca ttgcctattc
      181 tgtgattgct cagcatgcac aagggtagag ttaaaatctt tattaatttc atttaaaaat
      241 gtttcttttg ttctccttat cgtgttctgg ctttcccaag gatatatgcc ttgaacgaaa
      301 agtcacatgt gcattactaa ttgtgtgcca ttgtatttac agttcctagt ggtggcactg
      361 tgaagctact aattcttttg cttcacttga tgtaaaataa tctgagtgtc tttgatagca
      421 gtgaaacagt attaattgtt ttgtacattt cttggtcact cttcttaggt ggtcttcata
      481 atctattaga actttcagcc agatttttgt aatgtcatgc ctccagcagt gattaaattg
      541 gtaattaatg aacagtcctt ggcaacataa accacatccc gttaattttc ccttttgagt
      601 ttttcggagt tgtcgtctct gtcagaaagc attgcgccac cttgctacgg ccccttggca
      661 tggaaccaca gcttttttgc agccattagt agatcagagc agtaatttca cagtattttg
      721 gtcagggtaa ttatagtacc aagtaccgag tagagttggg aattcacaca agaagtcc
//
LOCUS       KCPA01003017             657 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 331758tic ultra-conserved element locus
            uce-3602, sequence.
ACCESSION   KCPA01003017
VERSION     KCPA01003017.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 657)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 657)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..657
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="331758tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>657
                     /note="ultra-conserved element locus uce-3602"
BASE COUNT          209 a          119 c          128 g          201 t
ORIGIN      
        1 cgtttttcat ttggctttct actatatctt aaatgcttta tttttcagag gagagataag
       61 acttggttct tcacataaaa ctacagctta gccattactt agtctttctc tgttacagaa
      121 aaggtcctgt ctgtgcacag atgtctcaga ttaaattgta tctcacagtc cttacagtgc
      181 tcagtactag atgaactgcc aaaagggccg taggcaagaa ctaaattgct ttggtttcag
      241 tacacagtga atttggctca gacaagctga atcagtacat taaatgcgaa tccctcacag
      301 atttgaaagc agcctttagc acaattattg actgtgagtg atgattatgt ctaattgaag
      361 gagacttttg ctacctgtag ctcagttgga gtccatgaga accacagcaa ggcactgcat
      421 cttaattcaa tgttccagct tgaaagaagc aattgaacct aaatcctgaa gtgtatacac
      481 atggtcgata aactttaata aactttacag gttcagtaac tagactgagt gtacataatt
      541 caattcagaa agggaaaata gctaacaagt atgttaggct acagtaatgt attagttcat
      601 ctcatgcaga ggccaaaagg aaaagatata gtttcatgct tgtctttgga agaagtc
//
LOCUS       KCPA01003018             774 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 331870tic ultra-conserved element locus
            uce-1678, sequence.
ACCESSION   KCPA01003018
VERSION     KCPA01003018.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 774)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 774)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..774
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="331870tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>774
                     /note="ultra-conserved element locus uce-1678"
BASE COUNT          261 a          149 c          127 g          237 t
ORIGIN      
        1 caggaatgac tttcaatcag gcatttttaa attgttttta aaaaaactaa gctaaagagt
       61 ttaattaaca ggctcagagt aatagttata ccatttttac tctgctatca gctttcactt
      121 ttatttacga tgggagtccc ccttgtatct cctttcccac agggcccact atcactaata
      181 tttctgtgat ctgtgaataa accaaaattt aaagttagta cttacaatca atgcaaatta
      241 atgatttctt aaaaaaaata tttcaatcag gaaaagcagc tttgtagttg aaaatcccat
      301 gctggcctta gagtgggagt ttttccagcc tctgcttaaa tccaaaaaaa tactgcaatc
      361 ttctggcaca ggctcactgt aatgctttaa aaacaattta gcaactgtca ttgctgtaat
      421 tacagtaact aattaccatc cttagcaaac aaatagctta acataatacg caagccgaat
      481 caattttgaa gaaatgcaaa ttccgaaagc gaaaaagggc attttggcaa acctgaaaga
      541 gaagcgggaa aataatacac tttgttttat ctgcacataa ttcccaggga atatcatatc
      601 ataaatattt gcattcagtt cttatcagga catttgcatt tgcttcttat cagtctgcag
      661 gctggactct gccagataga aagtagagct ccacaccatg cacatatttc taatgaatca
      721 cgtctcaggc cgagagaata ttttggctgg aactttatca ctgagatgaa gagg
//
LOCUS       KCPA01003019             632 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 331977tic ultra-conserved element locus
            uce-4472, sequence.
ACCESSION   KCPA01003019
VERSION     KCPA01003019.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 632)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 632)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..632
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="331977tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>632
                     /note="ultra-conserved element locus uce-4472"
BASE COUNT          183 a          135 c          107 g          207 t
ORIGIN      
        1 cccatgacat aaacaatggc actctggtca taagccaaaa cctgacaaag gtccaaggtt
       61 gaaaagggtt tctttgagcc tgtcttcctg gtataattat tgtaggttca gaggaaccag
      121 atctggagtg ttgtaaaact caacacaatg aacttgacag acagccagat ttctgttttc
      181 agccagttta gggttactat aatctcatta ttatgcttga aagacgacaa gtaatagaat
      241 ctcaggtagc tgttctgtct ttactcagcc gcatcttctc ttttatgcca attttccttg
      301 attacctgaa ctagtgaggc tcggttttca accacttatc ttccagcaat aatcatctga
      361 tcagccttac aaggttctca ctgcactcaa cggttttaat gggtcaagcg ttaaattaac
      421 cctttaacca taccccagga gaatacaaaa cttattaaaa aacaatttac tattcagtca
      481 ttgttaactt tgcagaggag aaggagctct ttaaacagat ttgcttgttg ttccatccac
      541 tcataccttg ttttgctgta cctttagcct tactaataca tttttttaaa gcttcttgag
      601 gaaacattct tcaggtttct tacttccaag ga
//
LOCUS       KCPA01003020             784 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 332087tic ultra-conserved element locus
            uce-2453, sequence.
ACCESSION   KCPA01003020
VERSION     KCPA01003020.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 784)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 784)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..784
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="332087tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>784
                     /note="ultra-conserved element locus uce-2453"
BASE COUNT          195 a          172 c          194 g          223 t
ORIGIN      
        1 ttagcatggt agaaggtgca tttggaagtg gcaagattac agtggctttc ccaatgtgct
       61 tcagactatt aaacctctat gtatttatta catttcatct ttaatgcata cttgacctct
      121 gctggtgctt aaccgaatta ctaattaggc acgattcacc gcagcgtagt gaaggtctct
      181 gatgcaatga gccgtgcaga cggactagcc tgtgctgttc ccattattca gccctttctt
      241 gttctcttaa aaaaatcagt tggagataaa acgggtaaga ctttggcacg ctgcatggta
      301 tcagtccgag ctgatgcaaa gagtgattgt gaagtgtttt cttatgcttc ccgcagtgga
      361 ttcactattg agttggcttc ggcgttcaca gttgtggtag cttccaatgt tggacttcct
      421 gtcagtacta cacactgcaa ggtatgcctt tgcccagcga ctgcagtcaa ggcagtctgg
      481 actattcatc ttaaaattgt gctgctcgag ccaggggtaa tggcacggtg aggggaaaac
      541 agccgctgac ataggtgggg gtgcatcagc acacctcggt catgccagca acgtggcaaa
      601 gtaatcaggc ttcctacgtc ggagttggaa ttggccacag cataaactcc atagctgctg
      661 gtaaaaatag cgcttacaag catgacctca attttaaaat aaatgattgc aaggaagagc
      721 ctggtttcct ctgacggtgc cgtttgaacc tggtcgggta acatttctcc cttgttcaga
      781 ggct
//
LOCUS       KCPA01003021             730 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 332193tic ultra-conserved element locus
            uce-7257, sequence.
ACCESSION   KCPA01003021
VERSION     KCPA01003021.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 730)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 730)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..730
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="332193tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>730
                     /note="ultra-conserved element locus uce-7257"
BASE COUNT          200 a          152 c          140 g          238 t
ORIGIN      
        1 cactggtgga gcaaagatgg ttcattttcc tatgaagtcc tgcttctgtg gttgcttttc
       61 tcagaatttc tgatcccagc aggatttcct tctgaagtac tcaccatctc catgtgcctt
      121 tcctagcagc tgtggctgtt ctgttctgaa cactagctgg acacaggagc actgcagggc
      181 gagcaataac tccaatagcc agtgctggta cgtggtgtcc atatggacag tattttacat
      241 taaggctttt ctttactgag tttgatcctg gccccatgag tcatagctgt caagggattt
      301 gttgtaagta atggtcattt gtgcttcata attatcttga ataaacacaa ttagttccac
      361 attctgctgt tttcttccta aggcatctgt aaacattctg tactattcta gcaaatggct
      421 tttggcaatc attagaaaat aaaacccaga gcaaaatggt tctcagtgga tccttttaat
      481 ttattctaag gagtgtgccc agaggagtaa tgagacctac tagacagtaa tggcaaaggg
      541 atattatctt tcacttagtt aaccatcgta acccactttg aggtatctcc aatcacagtc
      601 ctgatgtggt taaaatagaa catacactca agagttttca cttcggggtt tctccaataa
      661 ccaacctaat atattcagta taggaataat gtagacatct tatttccatt cttccattaa
      721 aaggatatcc
//
LOCUS       KCPA01003022             619 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 332302tic ultra-conserved element locus
            uce-125, sequence.
ACCESSION   KCPA01003022
VERSION     KCPA01003022.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 619)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 619)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="332302tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>619
                     /note="ultra-conserved element locus uce-125"
BASE COUNT          203 a          143 c          113 g          160 t
ORIGIN      
        1 cacagtttca cccttttaat cagaggtaac tggtctcaag caatgatgct cttttcctct
       61 acagttctaa gcaatacacg aagaaaacgt taacatgcag aaaagtagaa gatgagataa
      121 tgtacacagt aagccccgta aaactcccaa acaaaccagt acattttgaa ttgctctttg
      181 gtaactgatg aaaaaaagcg ttatgaggca aatccttcac tgggtcactc actggggaga
      241 ctggtaaaaa taaattgcac agctctaatt ttcctagcag cttccatgct attctttgaa
      301 actgagtaag aaacccttgg cctaatccca agagccaatc tatagtaaat agtgcacact
      361 taatgcctaa gttccttttt agcaccattc agacagtgac ttcagccaca cagcttagtc
      421 atagcagaca tttttgtggt gaaagcatta aacccacatg cagctctctt tctgtggcca
      481 ctgggggtca tgctcctttc ccattagctg aataaatcat aaagtctgca cagaccacac
      541 aagaagcaag gctagcaagc cacaggcagt gcctacagtc tgctatttct tttcagaatt
      601 gaaaaacagg agagaaaca
//
LOCUS       KCPA01003023             687 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 332413tic ultra-conserved element locus
            uce-3659, sequence.
ACCESSION   KCPA01003023
VERSION     KCPA01003023.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 687)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 687)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..687
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="332413tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>687
                     /note="ultra-conserved element locus uce-3659"
BASE COUNT          215 a          138 c          129 g          205 t
ORIGIN      
        1 tgatcatttt gcatcagaac actgttatct gtgactttta aataatcagc ctcactaaag
       61 actaatcatt ttgacagtgc attctcttca ctgcccatgt acttggaggc cgtcctcaaa
      121 acattgaaag ctgggacaat attcatggtt aagaaaagtc cagaagcagc caaacaggtg
      181 ggcacttctt tcagagatag aagacctttt gtacactggt tctatcttag gggggttaca
      241 cctgagagag aaagtgaatt atcaatgaca tttttttaaa gaatcagtgg tttaacacta
      301 atttctaatc agatcctaca gaaaggaaca gctcgcatgg cagctgtact tttcccaggg
      361 ttaattacct ttcactgctc tctactaatg agtcagctgt tcctgtcatc acacaactac
      421 actgtgttca tctgtagctc tagctgtgga caaacacagt agctagagcc ctgtttacat
      481 attggcgagg tttgttgtgc aaagaatttg caaagcaaaa atacttaaaa ctcctgccat
      541 ttccattttt catggaaaca atttttgggc aaacaccatg ttctccaggt tactaaatgc
      601 atcaacagga ataggaatct aaggacataa aagttaatgg aatgtataat agtttacata
      661 aggaagatta gatccctgta gccatct
//
LOCUS       KCPA01003024             651 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 332526tic ultra-conserved element locus
            uce-5433, sequence.
ACCESSION   KCPA01003024
VERSION     KCPA01003024.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 651)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 651)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="332526tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>651
                     /note="ultra-conserved element locus uce-5433"
BASE COUNT          200 a          122 c          123 g          206 t
ORIGIN      
        1 cctgcacagc gtgcaaccat gctctgctat caaattaatg ttaaaatatg tatgtcctag
       61 cttctgattt atatctttga caaatagtaa aaaggaaagg catgccataa agtttatggc
      121 tagggtgatg gcatgcacaa tgatgtctca taaagaataa agaaaagtta tttattcttg
      181 tgattcaaga actaaaatac agatagactg gctgcgtgca cagaattttt cataaatatc
      241 ccacagtgca ccctgttgta cagcagccat acattaatta gagcattcag cagacactgc
      301 aatgtgttac actcacccaa gtgaatcttc atttttcaca tgcagggcct tactaattaa
      361 aatcagcttt gcaattaaat gtggaaaatt gtgttaaact ttgaagcgtg gtttaggtat
      421 ttatttttag ggtattttat tttgatgcaa atgaattctc catcaaagtg agaccagtaa
      481 aaggaaggta tgaggatttc tcttttttgt attatagatg ctcctctcag ttgcaagttg
      541 caatgctcca ctatctctct gccagtacct ggccctgttc caatgctttt agtgagtgct
      601 atctgtcaag gcatgaataa tacagcccct aggctgtcgg cagaatccaa a
//
LOCUS       KCPA01003025             751 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 332639tic ultra-conserved element locus
            uce-3797, sequence.
ACCESSION   KCPA01003025
VERSION     KCPA01003025.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 751)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 751)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..751
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="332639tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>751
                     /note="ultra-conserved element locus uce-3797"
BASE COUNT          272 a          145 c          148 g          186 t
ORIGIN      
        1 tgtaagacaa actattcaaa aataatgaga catccaataa tacgaaaatc ccatgtacat
       61 acttgacatc atcgaagaca ctcatctgca gcttcaggag atctgccact tcctttatta
      121 actccaagcc cttttccaca ctcagggggc tgttgaaagg gagcaagaaa acagagcatt
      181 aaaaaatgga actcatcaat acttgagagg ctaaaggtcc caaaagagtt atcaccttgg
      241 cctcttcgag cctgaaagcc accactaact gtattcctgt cacatagtga ttgtgatatc
      301 aagggaattg ggatcaggtg cttcttcagg catgatgaat cacctgaatt ttccagcaat
      361 aagacaaaca ataaggtgca aatggaattg ttaggaagcg taatgggccc atgatgcagc
      421 aaccagttca tctcagtcct caataaaaaa tgtaataaag taaagggaca gaaagaaaga
      481 aaaggattga cgagacaagg agggaaacaa acaatgaaag tcaaattgca gtctcggtat
      541 caaatggaca agtgaaaagc atatttttaa attcactaga ttttaaaatg aatctttgcc
      601 cagtgattat ggatttgaaa gtaaacaatg gagcaagaca cacagtccag aggatactga
      661 ttagacacat aggatttagc ttggtgtgtg catacaatgc tgacagagcc ccctttaaat
      721 ctttttaacc tttgtcaatg ccacatttac a
//
LOCUS       KCPA01003026             751 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 332749tic ultra-conserved element locus
            uce-3857, sequence.
ACCESSION   KCPA01003026
VERSION     KCPA01003026.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 751)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 751)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..751
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="332749tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>751
                     /note="ultra-conserved element locus uce-3857"
BASE COUNT          256 a          136 c          123 g          236 t
ORIGIN      
        1 gtattgggtt acagttatct tcaatttaaa aactgtttat ctttgaaaat acgtatctgt
       61 tactgacaag ctctgaaaac caccactcca agtctgtcag taaaaccaaa tgttaaatgg
      121 aaaatatttg ccaggattta aaattagacc tacacattac ttacagatgt ttcaatgaaa
      181 aacacttgaa actcaaccac atagagtaat aaaccccaca atggtctatt ttttttatac
      241 tccaagttaa tttttattat ataagtagcc atacgaagaa gccattgcat actgcttaaa
      301 ttaaatgtgg aggaatgaaa tcagcagtat ccctttacag catatggtcc agcaaatcaa
      361 attataaagc tttccacatc tcattaactg caatgagtac agtgagattt ctaataagtc
      421 acttcttttt catgtgagag gtgagcagtg acttattgta actattctca caggatgacc
      481 cttgtgctga aattaagaac taatctaaaa tgggaaaggt catttggtca agtctgatca
      541 taacatttcc tcattattgt tttagttggc attgaagcac atgctttccc agtgcatcag
      601 ctgaaaaatg cctttgataa tttcactgac agcgagtaac ccacacactg ccatttaatg
      661 agtttgggct ggattagctg acaataaaga atacagtata aatgccttta tagaatgagt
      721 ttttcagcag gaaaatttca tgcaggcata c
//
LOCUS       KCPA01003027             357 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 332855tic ultra-conserved element locus
            uce-173, sequence.
ACCESSION   KCPA01003027
VERSION     KCPA01003027.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 357)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 357)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="332855tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>357
                     /note="ultra-conserved element locus uce-173"
BASE COUNT          128 a           70 c           50 g          109 t
ORIGIN      
        1 gaaaaccacc aaatataagt aaaactttgt cttttcctaa cattacattt gctctgatgt
       61 attttctgag agccgcccaa gtataactat ttattttaac taaagtaatc aagattaatg
      121 tcagcagtta tgacacacgc tgtttgctaa agaacacata gaacaattgc tcaaggcaag
      181 cttcattaag aaatcagata aaattagtaa aactgattat atttcaaaac tcagcagcgg
      241 cagcagctca aattgccatt caggagcctc caattaacac aattggtctt gttcacaatc
      301 agctttgtaa tctcattagc ctattatatt ttaatcattg ggataactgc acaacaa
//
LOCUS       KCPA01003028             370 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 332956tic ultra-conserved element locus
            uce-3734, sequence.
ACCESSION   KCPA01003028
VERSION     KCPA01003028.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 370)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 370)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="332956tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>370
                     /note="ultra-conserved element locus uce-3734"
BASE COUNT          115 a           67 c           62 g          126 t
ORIGIN      
        1 aaaaatttta tcttgattta gggttactcc gtgtgtgcat acatattttt ccaaatttct
       61 tggatggcct taaattcccc aagtagagag aaatgctttc catagagctg cttatttcca
      121 gtaacccaca tcagagctga cacatgaaaa atggtgaaat tactgaaggt agtccagcct
      181 gaataaggac taccttatta gttcaggtac ttgcatcgcc ctaattttca tattaatcat
      241 gtgtccatct ttctttgaaa tagggccatc atgcttcatg tcagaattta acatgtaagt
      301 aaaattcata gtgcttcaaa tctcacttga aaatatttgt atgaagagaa cagtgactaa
      361 ttttactgtt
//
LOCUS       KCPA01003029             693 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 333063tic ultra-conserved element locus
            uce-3752, sequence.
ACCESSION   KCPA01003029
VERSION     KCPA01003029.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 693)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 693)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="333063tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>693
                     /note="ultra-conserved element locus uce-3752"
BASE COUNT          213 a          143 c          125 g          212 t
ORIGIN      
        1 taccgtccag gtacctggtg gctttttgac tgtcatgtgc tccgaaagat ctctctctga
       61 atatgcccag atgcatgtaa tgggtctgct ttctttaagg tcaaacaaga aggcaatgag
      121 ttggacagtc tgttctgctt tgttttcctc aagtgaaata tgattttaaa cctaaatgct
      181 gacaaatatt taaattattt tatagttggt aaggttttcc acagtgccgg tttgttttcc
      241 attacatctc acaactctaa gtgctcaatg acagcctgta gaggtttcgc cataatccac
      301 ctttatccat taacagacac tcaatcacta aagtgcttac tagactaaac atatttatcc
      361 aaccaaatca cactttacaa tgcaatgctg ccaatcagac cccagctatt aacaaggaac
      421 tgctttaagg ggattttggt gtttgtgctg tgaagagcat gcttacctcc aacaaaccac
      481 taaaccaaat taacatagct gtatcctcat aaaagaaacc agatatcctg ttgtgaaaat
      541 agaaagcttg gtaggacagg gctcttttga tggctaacag tgtggcagac gaaggcttca
      601 gactacaaat ctggttactg caggctcatt acaaaactct agcattaagc ttttgctgac
      661 tttaaaaaca aaataaaaat ttatcatttg ggt
//
LOCUS       KCPA01003030             766 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 333270tic ultra-conserved element locus
            uce-7227, sequence.
ACCESSION   KCPA01003030
VERSION     KCPA01003030.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 766)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 766)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..766
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="333270tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>766
                     /note="ultra-conserved element locus uce-7227"
BASE COUNT          163 a          190 c          173 g          240 t
ORIGIN      
        1 aggcacctct cctcccaggc agagtctgtg cttttaatgt gatcgtcaca acctagtaac
       61 accgactggg aaactgagtg aagactggat ttcaaaagac agataacagc ctcctgaagt
      121 gccaagatgc tactcttagg tcaggaacaa gtcattatta gcttacctgt tcattaggct
      181 caaagcttat ctcttctttt tccgtcctca tagctattaa ctttgtgcta ccggaagggt
      241 ctgccttact gtccaaccgc tccagttttg ggggtatgtc tggtaaacca atatctttag
      301 tatcatcttt atctagcaag tagcgaagta gtgcattatt attcttctta ggactcgctg
      361 gctcctgttt aacagtcacc tctgaaccag gagctgtgct actggactcc tggttcagtt
      421 ctttgcctgt ggcctctgct gtgagcttgg ccaaatctac aggagaacta ctgtcctgca
      481 atagtctgtg caaaatttta tgcttctcct tgagcgaggt tccgtgtgct gaaccagacc
      541 caggcaaccc tcccgaggag tccttgctaa tgtctcccat ggtactggac aaaggtgaag
      601 gctccatctg atctgatttg gtggtcagca attgtaagag ctttgtctgg ctttttccgt
      661 cgtgcagttt attctgtcca tcaggtctct cgccactgac aacgggtggc atgttgctat
      721 cgctgttgtc tttctgttct cctgaatggc agctgctctc tgcttg
//
LOCUS       KCPA01003031             362 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 333369tic ultra-conserved element locus
            uce-5514, sequence.
ACCESSION   KCPA01003031
VERSION     KCPA01003031.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 362)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 362)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="333369tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>362
                     /note="ultra-conserved element locus uce-5514"
BASE COUNT          114 a           70 c           55 g          123 t
ORIGIN      
        1 ttcttgtata taaaattgaa gagtacaaag tgccaagggc ttgtattagt accatccatt
       61 ttgttaacat ttttccaatt tatcttgcgt tacgaaccct cagagtacta tgtctattgt
      121 aaatatttaa gcattaatgt tgacataaag ataatgctga caaattgagt taacatttct
      181 gctgaggatt actgaccatg tgtagtgcag aacaacttta acacccacac caagcgctgt
      241 gctcatgcca aactctgttt agtctacaat acggcactgt ccctcaaatg aatttttagc
      301 tttgatttac acaaaacatg aaacaacctt tcttggatca attaattgtt tgactttcct
      361 aa
//
LOCUS       KCPA01003032             770 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 333480tic ultra-conserved element locus
            uce-2355, sequence.
ACCESSION   KCPA01003032
VERSION     KCPA01003032.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 770)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 770)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..770
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="333480tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>770
                     /note="ultra-conserved element locus uce-2355"
BASE COUNT          231 a          133 c          133 g          273 t
ORIGIN      
        1 tcatttacaa tgttgattgc cttttcttga tggtttggct tcagaaacat gctgtggaat
       61 ttaaatttgt ccccctccta tgctaatgtt ggcattattt gtgtgtaaac acattacatg
      121 ggatagaaga aatgtaaatg agatttcgat gttgagttga tttataaaca gccagtctcc
      181 taatttattg aagttgtctt tgtgtcattt gcacatgatt agcagcatat aacatacata
      241 gggtgccctt ctgtaacatg ttcagaaaga agaaatgcaa actgtatacc attacaacac
      301 caaatgacga tcttattgag cttcaagatg ctttgaaaca tgtagttact aacttaactc
      361 tgcctgtgaa cttgtcctca ttaactccat aattagcaag atcatgtttg atcttggagt
      421 tcattagaca ttgcagctgg aagattgttt cagttttaac acatcagaat agacaattaa
      481 agtcataata aagaatcaat ataacttccc cgtttcttag attttttcaa ggttgcagtg
      541 tgcctaatta aacctggctt gaaacagtga aaaatttaaa agtaatgtgg tcatatttat
      601 tttagtttaa caggctattt tttgaaatgt actctgggaa acagtttcta ctttgggatg
      661 atttcagatt caactgctaa tttaagactt gagtatacat tatgctcatg tcccttctat
      721 tgtccatgcc acatgcaaga ccccttccct ctttttactt tgtgacagga
//
LOCUS       KCPA01003033             645 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 333592tic ultra-conserved element locus
            uce-6633, sequence.
ACCESSION   KCPA01003033
VERSION     KCPA01003033.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 645)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 645)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..645
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="333592tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>645
                     /note="ultra-conserved element locus uce-6633"
BASE COUNT          188 a          144 c          134 g          179 t
ORIGIN      
        1 cggcagggct ctccccaaaa gccggcgtta ttgcagatcc agcctcttcc accaaacaac
       61 agatgcagcc tctaatgcaa atattgccat ttccctgctg aattagcctt gtcacttagc
      121 ccagaagctg gcagcgttaa gccagcttgc attttaattt ggccctgaag ttacttattt
      181 cattattgat caaacataat gctgaatcaa tgttcatctt gttacctggg ccatttccat
      241 gtaatacagt gatagcactg cctggagtta ctcattccca tcccaaagtg actttaccat
      301 aaaatcaatg cttgtttgtt actgatataa ggcagcatcc gtaggatgaa gaacgaagaa
      361 agcagttacg ccaccgcgat ctgaaagttt ggacggaata tgtacgcgaa taaagacttt
      421 aatatttaaa tatattttat cgcatcaaaa tcaccctagc caggccgatg ggacagaaaa
      481 tctcaggctg caagatgaca ggctttgata ctgtaggtgt tgccatttgt aaacgctacc
      541 tgggacctaa tggggaaatc gtttctctac ccagagtatc attacacagc agatgtgggc
      601 tgtaagctct tccgggaagg gactgttttg gaaaaatagt aatta
//
LOCUS       KCPA01003034             741 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 333703tic ultra-conserved element locus
            uce-6296, sequence.
ACCESSION   KCPA01003034
VERSION     KCPA01003034.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 741)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 741)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..741
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="333703tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>741
                     /note="ultra-conserved element locus uce-6296"
BASE COUNT          209 a          155 c          159 g          218 t
ORIGIN      
        1 tgttggtttt attcattata tttgacatat taagcttctg tatcttggca taaaggacac
       61 aatattgcag catattggca agctcatttg cttttcacag ccagtgttgt gtccaaatag
      121 cagtccctgg ggagcaacac gtggatatag actgcaggaa aatgagcctc agcagcaggt
      181 ggccttttgc agcctaatga acacggcaat ctgttaccag cacggcgagg cttttcacca
      241 gacaattagg caactaagca tgtaattatt caggccaaca agaagagcct cttctctaat
      301 ttcatctttt cattgctgtt tactcaccca cactcccctc attaatgaga gattttccag
      361 tctatgctaa ttggtttcaa taacattcat ttcagttgaa agggagcgat tctgttaatt
      421 gggaatcgaa ggcgtctttt catttcgagt gcgtcctgcc atggaaatct gaacactctc
      481 aacaggtttg agctaatgaa attaagttac acagccactg gtggtgtaat agaaataaag
      541 taatttattt tcactgaagc atgtgctata ggtcctgaac aattaatcca gctcgttagg
      601 gagagccatc ggaggaggtg atttggaaca aggctgcgct gctgcaattc tcagggtggt
      661 ttcactgctg agctctccag caccacccaa aatgtttaat ggcaacgagc agcatttatg
      721 gaaacactaa ttctttaaga g
//
LOCUS       KCPA01003035             726 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 333811tic ultra-conserved element locus
            uce-1299, sequence.
ACCESSION   KCPA01003035
VERSION     KCPA01003035.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 726)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 726)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..726
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="333811tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>726
                     /note="ultra-conserved element locus uce-1299"
BASE COUNT          245 a          111 c          143 g          227 t
ORIGIN      
        1 aatttccagc ataaagattg tgaaataaga taaatacagt tctgcatgca aatttgcatg
       61 taatgcagtg aggaattaga aggcagtaac agaaaggaaa ttaagagttc attgtttcta
      121 tagctccaat atccattaaa agttagttac acagcaggtg aatgttttga aataaatagc
      181 agctgggtga cctgggatgt cagggctcta gacaagggtg tgtgtttgtc aatatatcct
      241 acgtgtttta cagactcctc agggaccagg agaagataca atttcacctt ttctgtgcca
      301 aaacatttta attatatctt cttccaagta cagcggttca gtaaccaagg agctgacatt
      361 gatgcatgtg ttgataaagc tgcaaacatt caaaatgaga ttaacaaaga ttttgaggaa
      421 agggtgacag ctaatttcgt acagtattct gcatctaatt caggtcagtg taatgataga
      481 atattttata actgctgtgt catctagaaa gactttcgtg atgctttgtg tatttagaga
      541 tgtatatgaa agtacagttc tttgtacatc attcaagcag gttatatcaa catctgttgg
      601 ttgtagctct aaacaggaat aaacttaagc atttagaagc aattttacat atccatctgc
      661 attaatcaca gtaattcatt ttgtctaata caccaggaaa atactgactt cagatgtgaa
      721 atgaaa
//
LOCUS       KCPA01003036             383 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 334028tic ultra-conserved element locus
            uce-4687, sequence.
ACCESSION   KCPA01003036
VERSION     KCPA01003036.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 383)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 383)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="334028tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>383
                     /note="ultra-conserved element locus uce-4687"
BASE COUNT           71 a           96 c           84 g          132 t
ORIGIN      
        1 cctgtatgtt tcttttccct tcccctcttc cgtttctccc tcattttttt ttcctcctct
       61 gtttggcttg tgggttcctc cttccttgct ctcttccctc cttgcagaac aagatggtga
      121 aaggcagcct cagcacagaa cagtcggagc gggggtgagg ggggaagtgt actcctggga
      181 atggatataa aagcaagcac aggtgagtgg ggaagagctt ccagttccac ctgctacctt
      241 acatccagtg ctttcccggt ttctgtgaga aatcaaggtg cttttgtgta tcttcagaaa
      301 atttgtattc tctgctgcca ttctgtttgt atttctacag cagttccttc tgttaaacag
      361 ctttttagct gttacaactg cct
//
LOCUS       KCPA01003037             629 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 334136tic ultra-conserved element locus
            uce-3013, sequence.
ACCESSION   KCPA01003037
VERSION     KCPA01003037.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 629)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 629)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..629
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="334136tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>629
                     /note="ultra-conserved element locus uce-3013"
BASE COUNT          168 a          136 c          126 g          199 t
ORIGIN      
        1 taagtatttc tgctttttga tagaagtaca gagtaatctt tctacttcat tatttttaca
       61 aaatttttta tgttaaaggt taaaataaaa tgagcaacct gcaataccat ggcatcactg
      121 cagctaagtt cttggtaaac aactgagatg atatctgctt cttcagatta aatatatctc
      181 gtcctcagat ttatactggc agtttatggg ttctgcaaat gactgtctca gcactgcaaa
      241 gtaattccac cctgtcatat ttgtctttgg aaattgtaac aaattatggt gatttataac
      301 atcaaactca actgttccat tttttcccca gatgggaacg tcgctgatgg cgagatgctg
      361 ggccatccat ttaggccgtg tggagggtga cagtgaaaca tgtttcatct ctcttgcctg
      421 acactctctt tccctttgag gggaggctgt cagcataact caaactgtca aggcaccatt
      481 gtaaggggaa acaaatctaa agctctgctc atgcttacta atgaggtgtg actccccagc
      541 cctgcctgcc tggcctcgat gaggctcaat gcctctgacc ccttctcagt cgatagaagt
      601 tgaaccatca tttgtcttgg agtgaggac
//
LOCUS       KCPA01003038             703 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 334247tic ultra-conserved element locus
            uce-1026, sequence.
ACCESSION   KCPA01003038
VERSION     KCPA01003038.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 703)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 703)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..703
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="334247tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>703
                     /note="ultra-conserved element locus uce-1026"
BASE COUNT          163 a          142 c          193 g          205 t
ORIGIN      
        1 gggactctgc tcttggcacg agagcgcttt gtctggagac gtggacctct tggctccggc
       61 ttgtggtcga ggtgtgtcct ggggtgggac ttggtggccg agggagccac tctgccaggc
      121 ttggtctggg gaggatttgc tccatggctg gtgggctctt cctgggtgga ggagccacgg
      181 aaagcgagat caacagggtc ttccttaagg ccttacctta cttttagaca gttgtcatta
      241 tctttgtcta aaggtcatgg ctaaattgaa taaaaggaaa gctgtgtgtt cctgtcgatg
      301 cacaatggca gtattgactt tcgtaatcca gtttgctgag gggtgagaga attaaattag
      361 atatctaagc acagaaattg agagcctttg aaaacaaaga taaggagaca gcctgtattt
      421 tccttttcct gggagctctg ggctcaagat tttgcaggtg tgtcatctga tccatggctt
      481 gcatcgatca aaactgtgcc aatgcatatt taattagcaa ggggaccctg gatgcattat
      541 ggccatcatc cctatattga atggactgtc agactttctg aatgcctccc caccgcttcg
      601 ttgtttgggg agcttctgca ttttgtctga gcagctaaaa gtttctttgt ttttagctgg
      661 tgatgcatac agcaccactg aggagaatac aaacaagtaa agt
//
LOCUS       KCPA01003039             794 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 334357tic ultra-conserved element locus
            uce-5246, sequence.
ACCESSION   KCPA01003039
VERSION     KCPA01003039.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 794)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 794)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..794
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="334357tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>794
                     /note="ultra-conserved element locus uce-5246"
BASE COUNT          229 a          147 c          159 g          259 t
ORIGIN      
        1 tggaagtcac acagtaagtt gctgaacagt gcaaatgatc attagaatta ttttaaacag
       61 attaagctat tgctgatcac tcattctctc tcaaagcttt agtaactgtt tgaaagagca
      121 aaggacttca aaatccacca tcttttcctt gagtaactta aatgaaatct gagctggaag
      181 ataaggatat tgcaaaaaga caccgaaaag acttgaatgg gttaagccat atctggctga
      241 gtcccaacag acataaaaat cacctgtgcc tgctctgaaa taaatcagtg tccttttctg
      301 ctgctgccgt tgtctggaaa taatgcaaat gcaatgggcc tgcagtgaca ttgtgccgca
      361 ctggaaggag acacataata aattgtcccc taatactgtt aaagagacat tttcgtctta
      421 ctcagtagct tttgaggttg aactgtgcta cttactcgtt gaggattgtg atacggtgtc
      481 atgtcattcc gctttattat ttgcttagcc tcttattgtt tatatgcaca tttgcttctt
      541 gagtttaaaa tgcattttgc tgcttatgct caatgataac atgttttctg gcttggaggg
      601 aaaaaagcag ggagttttct ttccactttg tttctgttgt tttaatcatt tctttccaat
      661 agcagctgga acagatcgta gatccatatg atttggttct actgcattca tcacttggaa
      721 aaatgcacag ctgtgttaaa ggaagacaga aagaatttgt ctgcccagcg ggaagctatt
      781 gctgttccat aatt
//
LOCUS       KCPA01003040             414 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 334460tic ultra-conserved element locus
            uce-3064, sequence.
ACCESSION   KCPA01003040
VERSION     KCPA01003040.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 414)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 414)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="334460tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>414
                     /note="ultra-conserved element locus uce-3064"
BASE COUNT          151 a           56 c           71 g          136 t
ORIGIN      
        1 tatttgcaga aatgttttta atgctttttt aaatgagtgg acagaataat gaagaaataa
       61 aaataatgca ggtgtagtca tttacattat agatggaaga ctgcataagc tgccgatgtc
      121 aagatggctt ttctaaagtg tttatatgaa aactgacttg cagcttactg cctgaaaatc
      181 tcaccttgaa cttattatga gggcaataat aatatgaaaa aatacagatg gtatcctgtg
      241 ctatctggaa acttcagttt aaacacagga accttaatac acggtagatt atttatatca
      301 aagctaagta ttaatattcc aaatgctttg attttagatg actgaacact aaatgaaatg
      361 aactatattc tcggttactt acatatactg aatgtcaaga gaaatttgta ttac
//
LOCUS       KCPA01003041             732 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 334575tic ultra-conserved element locus
            uce-8017, sequence.
ACCESSION   KCPA01003041
VERSION     KCPA01003041.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 732)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 732)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="334575tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>732
                     /note="ultra-conserved element locus uce-8017"
BASE COUNT          195 a          204 c          133 g          200 t
ORIGIN      
        1 taagttagtt ttaaacaaaa caataggaaa aaaaacctca ccccaaaaat gtgcttgtcc
       61 ctgttgcggt gttagcagcg cagttgctct tcttagaact agctgtgcaa gtcaaccaca
      121 cgaaccaagc ttttgcctgc tggtgggaat ttcataaatt tttccctttc catgcaggca
      181 tcaaagcaca gattatggcg agggagagaa gttgttaggg atgtagacct ttaagcagca
      241 cttgagcaag acaagtgtgc ctgttttttc tacagagtac agttgacaaa aagcgtgcca
      301 gccatcatga gagcaatggc tttgccggtc gcattcacct cttgccagat ctcttacagc
      361 aaagccattc ctcctccact tcctccacct cctcctcccc atcctccagc cagccgacac
      421 ccaccatgtc cccacagaca ccccaggaca agctaactac taatgaggta tgtcttacac
      481 cacagctggc tgctttcatt atagcagcat tgcctagtag ctagtttgca aaggaactcc
      541 agccaatctc ccctgcctgt cacctttgtt cccacctccc aaataacaca tttcagttct
      601 gtgtaagaag cccttaactc tagagcagtc ccatgccaaa cttgccagtt tactattttt
      661 gcttcctttt agtgagtcat taattgcatg gcgttcgttt taaactaaac ttgactgctc
      721 aagccaatac tt
//
LOCUS       KCPA01003042             581 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 334686tic ultra-conserved element locus
            uce-4587, sequence.
ACCESSION   KCPA01003042
VERSION     KCPA01003042.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 581)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 581)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="334686tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>581
                     /note="ultra-conserved element locus uce-4587"
BASE COUNT          175 a           93 c          129 g          184 t
ORIGIN      
        1 tttttttgaa ggagctgaaa agaaaaaggt cttggaatta caagcagtta gacttggttt
       61 ttttgcgtaa tgactcctgg tatcccactg tgagaagact ttccccagct tctcgtctgc
      121 attcttcctc gttccctgcg ggagaatgag ttggatttgt ctgccatatt cacagcaatc
      181 gaggtgatcc aggttgaaag aaaatcaata agatgtgtcc atttatgcct cacaaaggaa
      241 gaaaggtcta aagaacagac atgggacgtg attcaagcac tagagactta ataagacttc
      301 tacttgtgtt tgaaggggat ggtaatttat attttacttt gaactttttt tatgcttcat
      361 aactattggg attcgggctg acatgggaag caaggaaaag aaggtttgat gctgtcttag
      421 aagacctaac ccatttggga aggccatgct caaaagttca aaaaattttg ttttagaaaa
      481 gattaaagag acatcatatc atcgtactga tttatcgcta ttgataaaac tggtttaaag
      541 tattttggat tggggtacaa tgtctttctt cgagaacagc t
//
LOCUS       KCPA01003043             388 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 334789tic ultra-conserved element locus
            uce-4018, sequence.
ACCESSION   KCPA01003043
VERSION     KCPA01003043.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 388)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 388)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="334789tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>388
                     /note="ultra-conserved element locus uce-4018"
BASE COUNT          126 a           48 c           67 g          147 t
ORIGIN      
        1 tatggccact gtatttgtta attatttgca atttgaaggt acaagtagag gtctaaattt
       61 ttgttcttta aaaatgcatt taagttgtaa acgtctttaa agcctttgaa gtgcctatga
      121 ttatatgtga ctcgttgcag actggtgtta atgagtatat aacagtaaaa gaaaatgttg
      181 gtattttata agcacagaca attctaatgg taacttttgt agtcttacat ggatagacat
      241 aattgtaatt tgggaacata aacactactg aataaatcat gtggcctaat actgagaatt
      301 catatacttt tgtatgtttt tcattttatg tctatttgct tatgttttaa tgtcacagag
      361 tacatcagta gatcttaaaa atccagac
//
LOCUS       KCPA01003044             577 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 334899tic ultra-conserved element locus
            uce-7786, sequence.
ACCESSION   KCPA01003044
VERSION     KCPA01003044.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 577)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 577)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="334899tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>577
                     /note="ultra-conserved element locus uce-7786"
BASE COUNT          192 a           91 c          100 g          194 t
ORIGIN      
        1 atttaaagaa atcatctatt ttaccgtaag aaaaataaat gctctaagga atggaattca
       61 ataacttcgt tacattctaa gatgccaaat catctgtgag tggtttcttt ttaaaagaaa
      121 tcaaaatata ggacagatgt tggacaaacc acatttgagg tctatcacac actggcattt
      181 ttcaaattat tttggctcat ctattgaata aggtgtattt tgcttgattt tgaaaaggga
      241 aacatcagga aatatttaaa ggccaattgc tgccaattaa ctttgatcag taaaagttgc
      301 atttgaatct ttcagattct tttgctgtct ggaataacac actattctaa aatctagcaa
      361 aacaacaact tgatgattaa tgtgtgttgg cagccccacc acaagcttgc ttaacagctg
      421 gattttaaat aaacagctgt cttcactatg atgggaaaga aatctgactg ttttcatgtt
      481 tttgcattat taaaatgtga tcagaaattg cttttttccc ttttaagatg aaatagccag
      541 gcattagagt gacagtctct ttcagcagtt tggagag
//
LOCUS       KCPA01003045             794 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 335008tic ultra-conserved element locus
            uce-5425, sequence.
ACCESSION   KCPA01003045
VERSION     KCPA01003045.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 794)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 794)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..794
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="335008tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>794
                     /note="ultra-conserved element locus uce-5425"
BASE COUNT          244 a          158 c          166 g          226 t
ORIGIN      
        1 tattctaccc caaaaggtgg agcaaaagca ggttatcccc tcctcccctc aacacttttt
       61 agtccaacac aacgactgca tgcttcagca cagatttctc tgctagttgg atcccaggag
      121 gccttattga gtgcaatgct gcttagggag ttgcagctgt ataaagtgaa aaaatgtggt
      181 ttgtacgaat tgttctttac cttggtttgg gttcagcatg gcagctgcac tccgactttg
      241 tgtgtgacag cacaaaggac agcaaaagtg aaaagcaagt cagcaagtgg agagacaaaa
      301 gcaacgatca gctaatacag ctccacatgg cctaactaat ttatgagaaa aaaactgttc
      361 tgttcattgg atcagcactc tgaggaggca ggtggaattg taggaagttt tcattgagtc
      421 tctggagcaa ctaaggaagt cactagagat tcttctcagt ttgaacttta tcagggtcta
      481 cgcttaatca atatggtatt ggaaaaagaa ttaattacta aagcagaata aaacagctgc
      541 attttaaact aaggatccat caattcagta atcttccagt tacaggctag gtgccgtgag
      601 gatcattttg acttcatgta atgaggaact gagggagttt cctcatgaac aggctgggaa
      661 ttcacattag cctatttcag ctatttgtca tcagtacaac tcatttctcc ccttctgaat
      721 tacaatttgt atttgatata ctgtcaaacc cacaaaattc ccatattcat ggaactgaaa
      781 gcattaatgt ggaa
//
LOCUS       KCPA01003046             714 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 335116tic ultra-conserved element locus
            uce-7417, sequence.
ACCESSION   KCPA01003046
VERSION     KCPA01003046.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 714)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 714)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..714
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="335116tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>714
                     /note="ultra-conserved element locus uce-7417"
BASE COUNT          157 a          182 c          150 g          225 t
ORIGIN      
        1 cgtagtaacc atacccacag atgttgcatt tgaagtcctg aagctctgga gacagaggcg
       61 ctgtatctgg attatcattt accaacaaat ctgcttttga tttgttcagc cttaaacccc
      121 catctgaagg cacttgtggg ttttttgagg ccatggggac cgggctgggg ccttggccat
      181 cagtttgacc actttgcact tgcactgttt catctgaagc ttttggcgac atctgatgct
      241 cctcatttgt ctccgctgca tctcctgacg gggtacagac cacatcttgg gtgtcatctg
      301 catctgattt ttgaggagac ttcaagggct cacagattcc cccaacagct ggagatgaga
      361 aagccagcat atttctgtct gtcacctcat catgagggaa ggatggaaca tttcctccct
      421 tattgtggct ttcataattg aagccagcct tttcactcag cactgagctt ttcaagtcct
      481 ttttaacact agaagatggc tcttggacat gcatgcaaag ttcctccttg ttacttagct
      541 ctgccgcatc accctggtct gtgttttctt gcatctgctc tgcagaaaat tcttttttcc
      601 ttccagactc ttcactttca gtacctgtag actcaagggt ctgtacctca ccttcactag
      661 caatgtttct tagaggggga ttctttttcc ggaccatatc taccacagaa aaag
//
LOCUS       KCPA01003047             800 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 335229tic ultra-conserved element locus
            uce-6983, sequence.
ACCESSION   KCPA01003047
VERSION     KCPA01003047.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 800)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 800)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..800
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="335229tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>800
                     /note="ultra-conserved element locus uce-6983"
BASE COUNT          214 a          194 c          160 g          232 t
ORIGIN      
        1 ctgttgctga tgaggctacc agtgacataa ataaactcaa gcagaagatg taagcgagtg
       61 gataaatgta aaggcatctt tgggcagtgc cacggatttg gacgtggacc aagagaatta
      121 tttctgtccc ttgcgattcc agtgaagagc acaaaggaga taattagccc aggatgctcc
      181 gcattgctct ttccatcttg cgcacattca tgcccaccaa atgtgaaatg ttcgcctttt
      241 cccctccaat gtgatggttg ttgaacttat ttttagtgtc atttgataag cctctctgct
      301 cacagagaga catcccactg acccagccac tggtcattgt ctataccagt tcccatcaaa
      361 gcgggcgcgc tttgtcaggt ttcgacttga atatccattc tgcctctgaa gtacagtatc
      421 gaaagtgact ggatcatttg agcctttttc ttcagctgct ccctccttcc tcccccacag
      481 tgtttccgct cacgctaaca taatttggca tcgtcgacgt gacacgacac tggtttttct
      541 aaaaaattat aatacataca ttgtcgatgt ttggtgatgg ccagcgctcc cataaattta
      601 atttccaaat tgatggaaag aggtctttcc cactgcgaaa tcgtacccaa cgctcggtgc
      661 cccctccgct gctgaggaac acacatacag taataggtca ttcaatgtca aaaggcataa
      721 aaaagatgag caaaatcttc acaggctgct gcttgctgtt gcctttaatt atattaatta
      781 aactttgaaa ttctcatgca
//
LOCUS       KCPA01003048             506 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 335339tic ultra-conserved element locus
            uce-1119, sequence.
ACCESSION   KCPA01003048
VERSION     KCPA01003048.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 506)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 506)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="335339tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>506
                     /note="ultra-conserved element locus uce-1119"
BASE COUNT          148 a          107 c          108 g          143 t
ORIGIN      
        1 tagctagttt acttctctgg cttaaagatt agatgttttc ttttggtaaa gctggctatc
       61 ccaactggct gtattaaaat aaggaagaat ctcaatcaaa aagcctctcc taaggcaagc
      121 tttcttgtta atatgcacca acatgaaagg gtttcttttc atcctataca actacagtgt
      181 gtgtaaattg cagggggctc attggcataa atcttggctg tgacctctga ggtaaactgg
      241 atttacatta ctttctgaca agaattaaat gaaggccttg tggatatatg aacagccttc
      301 tagactgcaa cagatgggca tgaatgtgct ccctaggcaa actatcagtg acatctgtgt
      361 cctccaaatt ctggtggtct cagccaatta gcaggcaaaa cccctgcaca gcttccccag
      421 ccagagctgg aagtgcttct gtttggaaat gggatcaaga acagccttgc tctaacatgg
      481 aggtaacact acagaaagct gaagca
//
LOCUS       KCPA01003049             481 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 335447tic ultra-conserved element locus
            uce-7349, sequence.
ACCESSION   KCPA01003049
VERSION     KCPA01003049.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 481)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 481)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="335447tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>481
                     /note="ultra-conserved element locus uce-7349"
BASE COUNT          140 a           93 c          103 g          145 t
ORIGIN      
        1 tttttgtttg aattgtataa aactgttgaa acaaaataat ttattagctc agttttattt
       61 gcaaggaagg ttcagttgcc ctttatatta ttgttatatc tcaagacaat gtttctttac
      121 ttatgagcag atgtttgaaa tcctccagga gatttttata agactatgga aatgaacttg
      181 gcatgggtac cggtctccca ggtggagcgg gtgaacacaa gccttcttag aagtctcaga
      241 tcaaggctag tcagaaagag caacagagcc cagccaccaa aagcctagtg ctttggtgac
      301 tgacaggtac aggctctttc tgaagcataa aaaggaatgc taaatgatct cactgacaga
      361 ataaatcttc tatttgtttg gtctggacca gatgtgctaa aggctgatgt ggaaatgtct
      421 gctgatgcca atctcagttt aaatcacaat ttggcagcag ggcccctcac tgctctcccc
      481 c
//
LOCUS       KCPA01003050             415 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 335554tic ultra-conserved element locus
            uce-520, sequence.
ACCESSION   KCPA01003050
VERSION     KCPA01003050.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 415)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 415)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..415
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="335554tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>415
                     /note="ultra-conserved element locus uce-520"
BASE COUNT          120 a           75 c           97 g          123 t
ORIGIN      
        1 gaaaagagaa ccacgaggca acaaggaagg gaaataaaac tgagcggggt gggtgggtcg
       61 ggggctgtga gtatgaagga ggaagaggga ttaaaagaaa tatcaatcaa ttggagcata
      121 ttcactttcc cctgcacagt agattctatc agaagaaaac actgaacttt gtagtgttag
      181 cagcagctga aatttagaat tattgtttcc tcctaacaga agactcattt tccacggccg
      241 catttgcagc ataataagct ttttgttatt ttttcaatta gagtcaattg acctaacaaa
      301 atggttggca attaagtgat ttttgtaatg gtccgggggt aatttagtcg agcttgtcag
      361 ctgtgtttca tgaagccgag atgtcttttt ttcccctctc cctctccctc tctct
//
LOCUS       KCPA01003051             616 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 335663tic ultra-conserved element locus
            uce-7344, sequence.
ACCESSION   KCPA01003051
VERSION     KCPA01003051.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 616)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 616)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="335663tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>616
                     /note="ultra-conserved element locus uce-7344"
BASE COUNT          172 a          105 c          119 g          220 t
ORIGIN      
        1 cctgtatata ttttaagaac aaacacctct gagattgtga cttggttgac gtgtcattgc
       61 tgttgttttc actacagcct tgtggaaaaa ctaattacct tttcatcttg gtaaattcag
      121 aggtcagttt accactacta tatcacaaca tgacagggaa cacgggtaat taggtaggct
      181 gtgtaacctg gatattccat ggatctcatt acatcttatt tagaaaggct ataatttgat
      241 tggtggaaaa ttaaggcatc tcctcatggg tcattttatc tttctgcaat aataattctt
      301 ggcttgatta aaaattgatc cagtgtctta aagtgaattt attattgctg caatctatca
      361 cccacagaca gataatctgg ttcccatctt tatctgattt gaaaaatctg tcacttatta
      421 tgtgttgttt ttttcccaat catttaaatt gatggtttgc tgaggcaagg cgtcctacca
      481 taggcttctt ggaagaaaga tgtatgagac tttcagccag tattttttac tgcaaggaat
      541 ctgactgtgt caaatatcga ttggaactgt gttgtggcat cattttctct gggttttgga
      601 tgcagagcaa taagaa
//
LOCUS       KCPA01003052             782 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 335775tic ultra-conserved element locus
            uce-7763, sequence.
ACCESSION   KCPA01003052
VERSION     KCPA01003052.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 782)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 782)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..782
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="335775tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>782
                     /note="ultra-conserved element locus uce-7763"
BASE COUNT          241 a          167 c          151 g          223 t
ORIGIN      
        1 aagtaacaaa tacatttctg tagacatacc acttaactct aaaaaaatat atacatacat
       61 atatgatggc tacaaatgag cttgtgattt tcttccaaaa gtatctgagc aggaagtaaa
      121 acattttccc agtggatgaa ataacattca tttttgccaa tctaagcaag gcagatttaa
      181 attttatgtg tgtccaactg cttgttcccc ctcagctaat aacctgcctg ctggaagcat
      241 ttcaaatgaa aaggagttca cagttcctaa gcccagctct gaatatatct gccatgcatg
      301 taaacaagta aaccattatg tttcttgttg agataaagaa taccatgata agtggggact
      361 tttaccaaac aaagggcttc ctattgcgag tgtggataat cttccagaaa accctgtgtt
      421 ttggcaaatc acaccagatt aatctattag gcatctcctt tcatcatcaa atttccgctg
      481 cctatcacag tggctgcctt atcaggcacc ctttactcaa tagcaggccc gttcctagga
      541 tttcaggtgc tggccttctg agctcagaaa acaggtgtcc ccactgtttt caggcaggca
      601 aggtccctgc acagaagcct gggaaagggc aggggtatca gccgctgttc tacctgaagg
      661 aacaggtaac aggaaactgt tgattcaata ggctgactta attggagagc attaatcagc
      721 actgagtgtt tcttgtgaat taaaaatcct cataagaatc cttcctgaca aaagttttgg
      781 aa
//
LOCUS       KCPA01003053             493 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 335879tic ultra-conserved element locus
            uce-6648, sequence.
ACCESSION   KCPA01003053
VERSION     KCPA01003053.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 493)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 493)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="335879tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>493
                     /note="ultra-conserved element locus uce-6648"
BASE COUNT          176 a           92 c           70 g          155 t
ORIGIN      
        1 acatgcatgc agcattccac ttttatgact tcggaataaa aatgcaaatg aatttattag
       61 cttaagcatg gcaccaaata gaaatttatg cacatacatt taaaaaacag accccttgaa
      121 aataacgcag ttgcaaccta ttaattttct tttttgacag tttttaaaat tcccctaaaa
      181 aaatgaaaca gcatgaatac tgtcaatata tcacaacagc cacattaggt tttgtgatat
      241 acatcataat ataaagagca ctattagagc acaacctggg aaccattaaa tcattctaaa
      301 tcactgttac attccattag tgtcaatggt gaaaccacat aataggcttt attacaaact
      361 tcaccttggt aggccattgt ctctaataac cacttctcta tgatgtggta tcatacccag
      421 aaatccaggg agataataaa ggctccctta tttctttttt attggatggg taaagttaaa
      481 tttagctgta agt
//
LOCUS       KCPA01003054             540 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 335988tic ultra-conserved element locus
            uce-897, sequence.
ACCESSION   KCPA01003054
VERSION     KCPA01003054.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 540)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 540)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="335988tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>540
                     /note="ultra-conserved element locus uce-897"
BASE COUNT          142 a           86 c           91 g          221 t
ORIGIN      
        1 taaacaaggt tttgacttac cctcgctcat ttccttatct ctctttaact tgggtagagt
       61 ggtagtaatg ctcccataca tataatcaat tcctcgacta gttttttttt gagcacttgg
      121 tctaagtggg ctgctcagtg aaatttgtac attcataaaa tagctgattg aaaagcaata
      181 tttcagataa atacaagcca gcgatctatc agcagttgta ataaaagctg ggcttcaggc
      241 tgtgatttta ttttgaaata ataagaattg ctttattctt tttacttgag ttaccatggt
      301 aattctgtcg tgtagcagtg ttatattgat ttagaaagtg gacagtaata tttcttttgt
      361 gttattctgt ttctaggggt tgatttctaa tttccacttg gagattactt ttataaattt
      421 cttaagtcct tccacttttt tctctagcag tgtaattttc ctctcacaca ttgctatttt
      481 ctgagcttat tggtttgctc ttattttaaa ttaaacttgc tggtttcaaa tattgaaatg
//
LOCUS       KCPA01003055             574 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 336097tic ultra-conserved element locus
            uce-5500, sequence.
ACCESSION   KCPA01003055
VERSION     KCPA01003055.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 574)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 574)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..574
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="336097tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>574
                     /note="ultra-conserved element locus uce-5500"
BASE COUNT          178 a          123 c          109 g          164 t
ORIGIN      
        1 ccttgcaaag tcaagatcac acatgacaac tcctccatgt gttgggtagc tcccattttt
       61 caccatgtca gttttctaat gtggattcca ataatgaaga aagtatttcc ttaggggaga
      121 aaactcatca agatgctgaa cccaattgca tgtcatgaaa accaaggtct gacaccagct
      181 gaggacagca gcagttggac aggtacggaa atctcgctgc ttggcaaggt cccagacaat
      241 ttttactcac ctctagtgta gtcaatacaa tcttctcaac tgaagaaaaa taagcctccc
      301 acaagaactg cgtctgctgt ctaagtgcta ggattttatc ctgatggata gacctgattg
      361 tagaaggaat ctgtaacaca agatgtaata tagtcagaag ctttagaaat ctcatcaaat
      421 taatatgctg ctgacaagcc ctctcctcca ttagcaggtt gtacagcttc agcactcctg
      481 tccaacagag atgtgtgtca acagttaaag ccttgatgta aaataaatga agccctttat
      541 aacctctgat atgaatatat ttttttgatt gttt
//
LOCUS       KCPA01003056             377 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 336203tic ultra-conserved element locus
            uce-3038, sequence.
ACCESSION   KCPA01003056
VERSION     KCPA01003056.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 377)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 377)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="336203tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>377
                     /note="ultra-conserved element locus uce-3038"
BASE COUNT          127 a           65 c           62 g          123 t
ORIGIN      
        1 aaaataaagc taatctgctt tgacagaaga gggctctttg gaaccaccta gtgagtctcc
       61 caaatatgaa gcagtaactc aaatgtcaat tactttttca acagcagaca aattgctggc
      121 acactaatgc aatttaagga caataattag ataacaggac tacagagtgt accaggtgac
      181 agagtttctg agataataga atctagtgtc ctacttctta aatattaaca tcattccatt
      241 tcagtcaatc ggtttatggt aattttaaaa gggcaaagca aattcttttt attgctaata
      301 atattgtgct tctccagcat tagctttgaa ggttagcaat ttacagggtc aaaccttaat
      361 tatattattt ccttttt
//
LOCUS       KCPA01003057             612 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 336313tic ultra-conserved element locus
            uce-5584, sequence.
ACCESSION   KCPA01003057
VERSION     KCPA01003057.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 612)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 612)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="336313tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>612
                     /note="ultra-conserved element locus uce-5584"
BASE COUNT          183 a          148 c          129 g          152 t
ORIGIN      
        1 agaggatggc acttgaaaag gattccccgg caggcacaac tcgcttgtgc cggcccacaa
       61 tggaggaatc cccctctcca agcacctgta aactgacact gcaaaccagc cattccaaat
      121 gctcatcaac aggccatata tttaagcaca gagcatcgcc taatctattt tttttcttcc
      181 ccttcttcct ttaatagatc ggagcacaaa agcctgagag agggtgacct accaaacaaa
      241 agggcctttg agttcctagg aaaagtagac ttggaggagg atggaaggaa tccaagtggc
      301 cctattattt ccacttgcac taattagaca tttttctgtc agctattgag cactgctgag
      361 aggccaaact cactgaattc atttctaaag tgtttacaga agtttgcatc tgtttgtgtc
      421 tcttcaggag gaaaataagc acttcaatag cattgtggaa aatctaaacg aagcatccta
      481 ttctgaaggg cttggcagtc ttgcagctgc ataatttaac tcccgctcaa tgccgaaacc
      541 tcttgtgtcc ctctccaaac ccaaatggac acaaaatgta gaaaagtcaa gccaggggga
      601 gaaacggggc ta
//
LOCUS       KCPA01003058             731 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 336423tic ultra-conserved element locus
            uce-7281, sequence.
ACCESSION   KCPA01003058
VERSION     KCPA01003058.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 731)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 731)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..731
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="336423tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>731
                     /note="ultra-conserved element locus uce-7281"
BASE COUNT          248 a          129 c          113 g          241 t
ORIGIN      
        1 ttctggaaat tgatcttttc agtagttcag gttatgtctt aatggacatg actaattcat
       61 cttagtgtta actaaagcta tgtttgattt ttaaatactg tacagtttaa taaataaacc
      121 aaacaaagcc tcaatgtaga acagtcactg ccaatgtcac ccagtatccc tgcagattat
      181 gagaatttaa caaatgcatt ccagtggtct gcagattttt cctctacata cagcatttaa
      241 aaaacatgta ttaaaacaga ccagtttcca gactaaacta atggagaaat tacatttcag
      301 tgcaaaatat tttagactgc atttctttct agtattcctc aggtgaagaa gtggttgcat
      361 attattaaaa atgtaacaaa agcagctaat gctttcataa agagtattat gttagggatc
      421 cccctcacat ctttgccgta ttttgaaaac aaaataacat ttcctatagc cagcaatttt
      481 gtttatttaa atgttacata tactatctca aggcacatct gatgatatat ttataacaca
      541 gtaggtgtca aagtatgttt aacatatgat ttctccagga tccctcccct ttctgtattc
      601 caaaatggag gaactgaaag tgcggtgtca agactggcga tccatattct atctttggca
      661 agcttataca agcactattt taaatgtaat gtaaaagaac tgtaaactag gaacttcagt
      721 ttatgaaaca c
//
LOCUS       KCPA01003059             530 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 336534tic ultra-conserved element locus
            uce-2814, sequence.
ACCESSION   KCPA01003059
VERSION     KCPA01003059.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 530)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 530)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="336534tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>530
                     /note="ultra-conserved element locus uce-2814"
BASE COUNT          122 a          166 c          145 g           97 t
ORIGIN      
        1 acatcccagg gcactctgct ccactgcagg aatgacaggt aggacacagg gcaggctagc
       61 agcttcacag cagcactgcc cagcctgggg agggggtacc tgggttcgcc ccgaggcact
      121 tctccaacag agctgccccc acctctcccg gcaggaggct gagccgtgcc gcatcttcga
      181 agaagaagac tatcagctcc aaacagccga gacctttagc tcaaatccat taatcctctt
      241 tattaaaccc gggtcacctc tgagtcctgg caaattaacc agcatctccc cactgcaagt
      301 acatcaagag gaaacgcgct gtacagcgcc tgtaattttc atggaccagg gctctgaggt
      361 cagagggctt cccgggctcc agtctctgcc tttgtcaatt taaaagggaa catcggcttg
      421 cgcttgtata aattacgaga gaggcagagc aggggcccgg gcgctcgcag ggcgctccgc
      481 cagctccagc cgtgccactg tcccctgccc ggggacagga gggacagcga
//
LOCUS       KCPA01003060             521 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 336641tic ultra-conserved element locus
            uce-6902, sequence.
ACCESSION   KCPA01003060
VERSION     KCPA01003060.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 521)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 521)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..521
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="336641tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>521
                     /note="ultra-conserved element locus uce-6902"
BASE COUNT          160 a           95 c           94 g          172 t
ORIGIN      
        1 ggtttctgat gctcactttg gaaaattagg tacatttaaa atcccacaca agattggtga
       61 ggaagtttta acaggaatgt acttgagctg ctgttccccc aactgaattt tttccatagc
      121 tccatatttt cttcttcatg tatattagtg ttctgagagc ctgtcatttc ttatcagaat
      181 gagaaaggct aaagagataa tatttcaata acatactggc ctgatcataa aataactcaa
      241 tggaaatgtg taactgcctc aggcagcaca gcaggatagt cagcagtcag atgatttcta
      301 ttctgggttt ctttttttat ggttacattt tctgttatat cagacatacc ctcaagtctt
      361 agttatgctt ttattcaaaa ggagatctgc agtataaaga cctacaaaac ttattatgat
      421 atattactgt aaagaaataa aagttggtgc cacagtagca tattgataag gacaggcctg
      481 ccacgttaat tgaccttttt catctcaacc accagggctg a
//
LOCUS       KCPA01003061             468 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 336746tic ultra-conserved element locus
            uce-4555, sequence.
ACCESSION   KCPA01003061
VERSION     KCPA01003061.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 468)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 468)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="336746tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>468
                     /note="ultra-conserved element locus uce-4555"
BASE COUNT          170 a           74 c           57 g          167 t
ORIGIN      
        1 ttatgtagag tttcaaaatg agatcagtga agtcaaatca accttccaaa tccatttcac
       61 ttttttatta tccctctttg gacataaaac acttcaaata aaagttctat taataaagct
      121 ctaaccacag attaaatatt tctgctgaca ttatttgact gataatatca atttcaaagt
      181 tcaaatttta ataatgtatt acaaagcata ggaagaaaca agctaatcaa gccaagtttc
      241 atatttcccc tctttgtata aaatgataag tgaatttaaa gctatgcttt gtctctttaa
      301 tatctgctaa atatggatga attactgaat atatatttat tcttagcctc atttgaaggc
      361 aaatatttac aaggcttttc tgttgtaatc tgattttaat atctcaactg aaaatgattc
      421 ataacatgta gcttcaaata ccctgtagtt aaagaggcca gaaattaa
//
LOCUS       KCPA01003062             613 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 336854tic ultra-conserved element locus
            uce-3644, sequence.
ACCESSION   KCPA01003062
VERSION     KCPA01003062.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 613)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 613)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..613
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="336854tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>613
                     /note="ultra-conserved element locus uce-3644"
BASE COUNT          216 a          113 c          113 g          171 t
ORIGIN      
        1 tgttctactc atttcaactg acaggagcat tgagctggct gggaagcaag gtaaatcaga
       61 agaaactatg aatatattat catatcttta tttagcaaat tacagcaatt taggaatttt
      121 gatagcctga gacctcactt gtagtacaat attcattgac cctgaaatgt gtgaagtaac
      181 ctcaagatgc acaagcttct gtgggcaaca aaatatcaaa ttcacataag gaggcttcac
      241 atttaaatta aaaaaccaag atattttgaa catacattag ggcaggatat ggtcctttga
      301 atgttattct caatgctcgt accagcagca accgtcatct gcaaaagggg gcaacagaga
      361 ttctgctgaa tggaagaaaa ttttgtacag tactacacac catactaata gatgaacgta
      421 tcattcagac aagattatct aagagaacac tgatgtggct caactggaat tcacataaag
      481 aaattgaaag tattgttaca tctcctggct catgaagtac tgagaacaac caaattagat
      541 ctctttggtg ttctgcactg tgttcacaga agtggtctcc tgtcaaaaag tccaataaca
      601 aataatcaca gct
//
LOCUS       KCPA01003063             434 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 336958tic ultra-conserved element locus
            uce-5258, sequence.
ACCESSION   KCPA01003063
VERSION     KCPA01003063.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 434)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 434)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="336958tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>434
                     /note="ultra-conserved element locus uce-5258"
BASE COUNT          150 a           84 c           77 g          123 t
ORIGIN      
        1 cactgaaaac catcagggtt gaaatttcat ccaagtcttt cgtgacgccc agcaaatatt
       61 cccctcagat tattttacac cttgagggaa ttttggtctt tagttcaaca ctcttgctct
      121 gttcccaaat ggggcgctat ttaggggaat ttaaagagaa agctgagaag aataaacatt
      181 tactgagttc tcttggcatt cagtctctga aaaaccacag tataaactat tcatgctgct
      241 tcttacatct gtcaaatcaa aaattaaaag ccataaaagt gtaacactga aaatatggca
      301 ttagaaagga taaaggtggc caaaaataac aaggaaagta tattagccaa taaaatattc
      361 taactcttca tttaaaagtg catcatgggt aggacagaga tgactctgaa gcgttgctac
      421 tccagtatta cccc
//
LOCUS       KCPA01003064             725 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 337071tic ultra-conserved element locus
            uce-6715, sequence.
ACCESSION   KCPA01003064
VERSION     KCPA01003064.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 725)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 725)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..725
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="337071tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>725
                     /note="ultra-conserved element locus uce-6715"
BASE COUNT          248 a          130 c          124 g          223 t
ORIGIN      
        1 agccgtatcc actttgaaga ctaaattagg ttatcatcag actaacatga tctacaaaac
       61 attgtaaaaa ggttaaactc tcttagatgg ggttcctgga tatttatatg gaattacaaa
      121 tgctcctgtt agaagattat ccttgtaccc atagattaag gccactgcat gaacactctt
      181 ttacaaatca atattaatta aaaattatta tgatcagaga gctaaacaaa gggcctatgc
      241 tactaaagaa agggtatgcc ccagtgacag atcactgtta aaacctctca tgccattggg
      301 tgatatttgc catatgtcca atgattgata gtaagattta atgagttctt acaagcaatt
      361 aaataatcaa gggttcctgc tgttacatgg catagcttga tagaacagtg acaaatgaga
      421 gaatatctgc aacctaatca aagggacata tttccttggg aacaaaataa tattatccac
      481 cagtgcaatc aaaggacaaa agaacacaga gaggacgcaa cagaatgaga taaattttgt
      541 gctcttttca ttattctggc catacagttt ccatttattg gatcctatta aatcagaaag
      601 acaattaggc tacttaaata tgtttcattt gtcataaact gttagctagt gggtacgtat
      661 ccatatccag tcaccttagg tctcctttcc ccatgaaaaa ctatgtttct gtatttctat
      721 ttggt
//
LOCUS       KCPA01003065             450 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 337175tic ultra-conserved element locus
            uce-8010, sequence.
ACCESSION   KCPA01003065
VERSION     KCPA01003065.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 450)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 450)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="337175tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>450
                     /note="ultra-conserved element locus uce-8010"
BASE COUNT          117 a           87 c           99 g          147 t
ORIGIN      
        1 ttttttttta aaccagtgaa ctcagaagag aaagcttcat taaaccaagt tctaaattgt
       61 tggggaataa taaaaaagac taacgagttt atgttaaatt gtgagaatag aacaaaaggg
      121 aagtgaaggg gtccttattt taaagctggg tttcaaaagt ttgagagagc ctaaagaata
      181 cattctcaga gacagcgttc aacggttgcc tggtcctcga acaggtgatt ggcttggtgg
      241 atcttctgca taaaacttca acaggtgctc accacctgtc tctctgtcac acagtctgtc
      301 tttggtctgg catctgtctc tgatgggcca tttcctaaac ctttattttc gtcttggctg
      361 aggctgtccg ctttgcaatg ttttttgctg ttgctgctgc cttcttacct gagccagtat
      421 ttcctgaatt tttctctgag caagctgaag
//
LOCUS       KCPA01003066             737 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 337283tic ultra-conserved element locus
            uce-5921, sequence.
ACCESSION   KCPA01003066
VERSION     KCPA01003066.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 737)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 737)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..737
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="337283tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>737
                     /note="ultra-conserved element locus uce-5921"
BASE COUNT          158 a          209 c          146 g          224 t
ORIGIN      
        1 tggctgagga gcgtgatccc gcaaggagcg gcgccgctgg tcctcctcct cacgctgcca
       61 gtcctcgttt cccacctctc cctgtccatt ccagctgtcg aatttccccc ttcctcggct
      121 ccgtgagtca gctgccttgt gcagcctttg tgctggcggg tcggctgctg ccgtcccccg
      181 gagcatcgcg gcctgcagcg agccctcccc gctccgccct cccgccgcgc taccccttcc
      241 ctgggctgcc ggcataatga gggcttgatt tcaatacttc ccctcatttc tctgttcact
      301 gctctgcagg ttaatgcaga ttccaaactt caacaagcag ctgttaaaca tgtcattaac
      361 actgcttcgg ctgcaaatga aactctgcta ttgggattat tccgggagct atagttttgt
      421 gatgagcttt gtcaatcaca gctgacctgc tgtgtacaga atgaaactca gattatcttc
      481 tttcttcctc agactcttgt cattttttca caaagaatta ctattctact ccccgaaaga
      541 ttgattactt gcacaaataa gagagtctga gacattaata caaaattcac aggcttttct
      601 ttatctcaaa cctgcaactc cctctacatt tcctcctggt aattatatta gaattgtgta
      661 cactaggaat tgccatctga ttattatgaa actagttttg tcatgacaaa aatgagctta
      721 agtcttgttt ttttgga
//
LOCUS       KCPA01003067             589 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 337393tic ultra-conserved element locus
            uce-2094, sequence.
ACCESSION   KCPA01003067
VERSION     KCPA01003067.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 589)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 589)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="337393tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>589
                     /note="ultra-conserved element locus uce-2094"
BASE COUNT          194 a           93 c          112 g          190 t
ORIGIN      
        1 tgtctaaaac catctaaata atgatgtttc ttctcacgta aatgggtatt actcatatga
       61 ccagctgcaa gatgagagtt ctaaatttat ctgaaccttg agatgagaga actgaaaact
      121 ttatgggaac ttttgattag ggtttgggtg ggtggataat gaaagagtgc aacattgaaa
      181 tgtgcctaaa taacatgctg ttacaagcct tatgatagat ttgtgtttga cttaacagct
      241 tttggaacct aataaaaaga acttaattga caatttcttg aaattgctaa gaaaacctag
      301 tgatgttggt agggtataat aaggagtttt ctcatcactg tcttcaagat tgagcctata
      361 caaaggattt atctctgtgg taactctaag taattgatat acagacaagg tttggttcca
      421 atttgccagc aataaagttg taatagggtt ttctctgcaa ttttagcctt aatgtgctca
      481 ttccaaagag cagtattttt ccaagcgaac aaataacatc agtaaagctt acgatcagta
      541 atagccccac actgatgctc acattaagct tgttaaatca attcactag
//
LOCUS       KCPA01003068             453 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 337497tic ultra-conserved element locus
            uce-4463, sequence.
ACCESSION   KCPA01003068
VERSION     KCPA01003068.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 453)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 453)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="337497tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>453
                     /note="ultra-conserved element locus uce-4463"
BASE COUNT          153 a           83 c           70 g          147 t
ORIGIN      
        1 tgaaatttac catgaaaatc tgaaagttag gcttgattta caatctggtc agcaagctga
       61 aatttcagat aaatggatat gtacatagtt aatccaagtg cactgaatcc agttcagcta
      121 ttttcttttt cactagatat ccacatgtta ttagaagtac acagctaacc aggtttcatg
      181 cagtagacaa aatagcattg tgggattaca ttagtccgac agctgcttta tgactatagc
      241 ttccagacca atttatttaa tattgatctt taaacaaaca tcagtacaaa taaatttgag
      301 cactctagtc ctgagatttt gtatctataa aagaggccaa tattcagaga agcagttctg
      361 cctgtatttc actctttgat tccgttttct ttgatcctac cagatatcaa atacatcaat
      421 gccagattaa aacaaatcta tcctgagata aag
//
LOCUS       KCPA01003069             524 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 337604tic ultra-conserved element locus
            uce-7426, sequence.
ACCESSION   KCPA01003069
VERSION     KCPA01003069.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 524)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 524)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="337604tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>524
                     /note="ultra-conserved element locus uce-7426"
BASE COUNT          162 a          104 c           82 g          176 t
ORIGIN      
        1 atgtaagcaa agcagaagca gaaatctgtc ctaatcataa gaaataataa tacagtcttg
       61 acaaagttaa agtagaagca aacaccttat atgtgtgtta cagtaatcca tgtttatgca
      121 tgaggtaaca cacttaggta acagcttttt cctcttgggc aatccttata gtccttctcc
      181 atcagtgaaa gccaagaaac caactctaag ctcatttaag tggattttgt tcttagtgat
      241 ccgtgaaacg ctctgtcttt ttatctgctc tttatacttt taatgtattc cccatagaat
      301 ggaagtgtac ttttcctgca gttaaagact aaggttataa ataacatcag tatggggtag
      361 tgtgcttgca gctcacattt tgctcaatga ttttccataa aacccattga ttgttgttaa
      421 atacaaaaag ctccatagga tcctctcact tctatggtct cccctactgt tttttcttat
      481 aagatacctc cctgtagaaa ataaccttta ttcagtctat acaa
//
LOCUS       KCPA01003070             643 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 337714tic ultra-conserved element locus
            uce-3231, sequence.
ACCESSION   KCPA01003070
VERSION     KCPA01003070.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 643)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 643)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..643
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="337714tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>643
                     /note="ultra-conserved element locus uce-3231"
BASE COUNT          169 a          160 c          134 g          180 t
ORIGIN      
        1 aattcccatc aaatggcagc gtgcatcagg tgtaaaaccc cgtaactcgt ccttctctga
       61 cggcgccagg gcgcttccaa cctaagggca gttcggtgcc atcccctccc agatccccag
      121 ggttcttaat tagcgatgca gtgccaggta ggtgatgcag agaggaactg ttttattgat
      181 gccagtagtc tgggctaaag cacagctcct gctgcatttc ttccagcagc gcgagctgaa
      241 tcttttccct catttgatac agtgacctct caagtgcatc attgccctga gggctgaggg
      301 cagtccagca actgttaaac cccttgggtt gataatcttc tcccacattt gcccttaaca
      361 ccagacatac caccattagc tacagctcca ctggtgctca ttagagccga tcaatataga
      421 ctaacataaa gaatgctgct gcgccttctg ttatttttca gttactgcaa atttacagac
      481 ttttcaccta caatacgagg ctttgctgct gtactatgtg aggatttgag acttaaaaaa
      541 aaacccagcg gtttttatta gatgactaaa tgttatttat caaaatacct cattactaga
      601 gagcagacgg gagatgttct ggacaaaatt ctctttggat taa
//
LOCUS       KCPA01003071             799 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 337826tic ultra-conserved element locus
            uce-4650, sequence.
ACCESSION   KCPA01003071
VERSION     KCPA01003071.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 799)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 799)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..799
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="337826tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>799
                     /note="ultra-conserved element locus uce-4650"
BASE COUNT          248 a          157 c          122 g          272 t
ORIGIN      
        1 agcctatgat attacacaaa taaataacac ttagcattat cttcagcact accatattta
       61 ttaaacagtg actgagggca gcagtaacca tttttattgt cccatacagc tcttattttc
      121 taattaaaca gaaggttatt tccactgcca atgcagccat ttatcttact agagtgttac
      181 ataatatttt ttgccagcca agcctgacta taaagtgttc tgtgtggtga actgtggccc
      241 aacttgcttt cctgtttggt aatcatagaa atgggccatt tcatgctgtg ttaataaata
      301 aactttttgc aatttctcct aaaacatgat aaagcttata ctctgtccta ccctctagct
      361 tcaatacaag ggcaatgagc tgtattatta aagatatagg tcaagcaaac ctgatgattt
      421 caatcctgtg gggtgcttta gaaactattg tcatattact gagatcattc tgctgttcct
      481 aattattcct cttggttgcc tcacatttca agtgatttct ctcacactta tgtcaaaatt
      541 tataagctac tccctgtaac aacactacat tatttcctca cttgttaggg taatatagga
      601 cagaaactag gagaatgctt taatctagct gacaaggata atgtagtctg gaaatgtaat
      661 aaactttgca ttctactaca aagttgtgac tccctaccat gaaacatttc atatagatag
      721 acatcttaga aaagctaatt gctacaataa cttgcatatc ctcttatctg agttgctttt
      781 atcagaaaaa tgtatcagc
//
LOCUS       KCPA01003072             704 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 337935tic ultra-conserved element locus
            uce-5261, sequence.
ACCESSION   KCPA01003072
VERSION     KCPA01003072.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 704)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 704)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..704
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="337935tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>704
                     /note="ultra-conserved element locus uce-5261"
BASE COUNT          223 a          128 c          139 g          214 t
ORIGIN      
        1 aaacaaagga caattgaggt gggtgaatga aaggagacct tgcaagctac aacataccaa
       61 aaaaatcctc ttcaaactgt actgcctttc agggagggtg agtgggctga taagtttatt
      121 tacactttta aaaagcactg ccaatcccaa tttatcagtt actgtcttgt gacaatttat
      181 tcattgttca ctgttagaag ctagaagtta cataggaagc atgattggtg atagcttctc
      241 tatttcaata tggtataata gagataacag agtgcccaaa agctctacag ccgccttttt
      301 gtctgctttg tctcttttca ttactctatc agaatcttca tttaatataa tccaaaaaag
      361 caaggtaatt gcttcactta tcagttatca tcgcactcgc atacttatca tgtcaaaatt
      421 atttatgtgg atggccaggt tgatcttgct gcatttagca gcttaaaatt tgaataactg
      481 ttctgccagt taggttatca aaattgcagc ataaacaatg agtttcttca ttctgtacct
      541 ttgagggaga ataggaagca tctcattgca ggactagttt acccgtggct gaacaccgct
      601 ccagggagac ttacagcaat tcttgagtgc tggggacagg cttcatttgc tagatgaaca
      661 gtaaataaaa atggcacgat ataaatagag acaatagaga gaga
//
LOCUS       KCPA01003073             667 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 338149tic ultra-conserved element locus
            uce-3257, sequence.
ACCESSION   KCPA01003073
VERSION     KCPA01003073.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 667)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 667)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..667
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="338149tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>667
                     /note="ultra-conserved element locus uce-3257"
BASE COUNT          228 a          114 c          118 g          207 t
ORIGIN      
        1 tgcacatggc aggatttcac tcagcagctt gagaaggtca attaagtatt aaatagcacc
       61 caggataaga gttgccatgt aacatatcat gagctgtgca caagggcata tctaaataaa
      121 atgcacagga aatagcatca cacaaatatg atctaaattt tttcttgatc aaagaggctg
      181 agggaaaaaa taattaaaaa gtaaaagcct tatgcaatga gatttaaaag aaaacttcgg
      241 aggctgataa gacgcatctg gcacaacttc aaagtccatc aaagtacata taatcaatgt
      301 ttgtcaatag cagttttgca tcctttaatt tatctttcat ggatataaag catgatgtta
      361 ttaggatcca gtccatacct taattctgtt tgagatttga tgaatcaggg ctctattaaa
      421 attcagtgca aatcagctta ttcaaggaca cattacataa agtcgtgtgt tatctaactc
      481 cttttatctt gctgtctttc taactagtta aagaatctgg aatttcataa acttgtattt
      541 gtggctgacc accaacatac agcttgtaag cacctccttg cacatgtggc atagtcaaga
      601 tatcaaaatt ctttgtgtat ttttaaatct cctttgggaa tgttgtaagg tatcatcaga
      661 aacaagg
//
LOCUS       KCPA01003074             692 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 338259tic ultra-conserved element locus
            uce-2809, sequence.
ACCESSION   KCPA01003074
VERSION     KCPA01003074.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 692)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 692)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="338259tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>692
                     /note="ultra-conserved element locus uce-2809"
BASE COUNT          213 a          157 c          167 g          155 t
ORIGIN      
        1 aggcagtgac agcaaagtgt gaaacccagg catgagcagg ggagaaagcc cagagagttc
       61 aaaggcaatc gggtgctttc cttaatttca attaaatcct atctgcccct tcacatcaac
      121 taatcactga ggggctgatt cagctccttc tgcaaaacag gacacgtatc aatagccaga
      181 gccaaacact ccttcctgga aatctgcagt gcacaatagt aaatacagag aaccgggact
      241 attcatgtgc taacaatgca gcggcagcag ccctttattg tcacacacat tgttaaaccc
      301 acaaagagca actggtaggt taaatctatt ttagctggga aagcttgaca aaaatccttg
      361 ccaccaagca tttgatactg atcacagtgt cacatcaggg aacagcaagc tcagaagaac
      421 aagtcatttt tttttatttc tgaactttag aggcaacggc ctctcctctt cgctggctcc
      481 ccaggtctta gtcctcttag taggaggtgg tccatgccac tcaatgagag caaattcgca
      541 ggggtgggga ggggagggta aaaaaagcag gaaacacaga atgctgtatt gaggcaacac
      601 aggtggatgt gagcacaaga ttttttctca agggaaatca aatccaaacc tcgggatggc
      661 agcaaagggt gtggcttgcg aggcagcagg ac
//
LOCUS       KCPA01003075             777 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 338367tic ultra-conserved element locus
            uce-1971, sequence.
ACCESSION   KCPA01003075
VERSION     KCPA01003075.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 777)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 777)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..777
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="338367tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>777
                     /note="ultra-conserved element locus uce-1971"
BASE COUNT          227 a          151 c          131 g          268 t
ORIGIN      
        1 ttctgcattt cattaggcag atttacttat tcatttcatg gaaaatatag cctatttctc
       61 tgtcgtctcc ctttaaagat atgctacata taatgtttat ctttgatcag acttattcag
      121 cagatagtag cagcttttgt tttcaaaaag tgaccagaga attggaagtg tgtagttaag
      181 acacctcata cagctctgtt tttctgtact tctctcattc tctgccaact ggtacctcag
      241 tcttactggt atccaataat aagcccgatt acagctagcc ctaggagaca tgacaaaaag
      301 agagtcctca tcttgcatta attgctcgta ttgaaactat gccacatctc tcgaagctag
      361 atgttgctta gtatcccttt gatatgataa tgacatgctt cttagcagat gaatatgcaa
      421 attaaaagca gtaatttggt ggcatgcacc tgctgacact gcactactat gcttatgtgc
      481 tcctctgtaa cactgcagct acacaaaagc atcacagagg taaaattaaa ttctaatgtc
      541 gtatatatta aacagatgct tccacttttc tttgtatatc tactttttac agaatttgct
      601 attggaatct cagttctccc tatatgcaat tagtggacat ttatgtgtca tacacagaaa
      661 tgtacttgga gctatttaag ggctctgttt ttaaagaaat ggtttacatg aactgcactc
      721 tcaaagagat tttttttcct tcataacaga gaggcagagg attttaatct tgatgca
//
LOCUS       KCPA01003076             486 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 338475tic ultra-conserved element locus
            uce-7459, sequence.
ACCESSION   KCPA01003076
VERSION     KCPA01003076.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 486)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 486)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="338475tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>486
                     /note="ultra-conserved element locus uce-7459"
BASE COUNT          140 a           88 c          124 g          134 t
ORIGIN      
        1 tagagcccat ccaggcccta cccattttaa aaattttccc agtctctctg aaaaaaatgt
       61 catgggaggc tttcaagcaa acccaagggt gctccctttg catatgcagt ttgtcagctg
      121 ggttggtgtt tgaggatttt tggggtggta tttcagagcc tgccgtgtct cccctgcccg
      181 gtggcaatga tgaatgccaa acaggagaga aattaatgct ggggattttg gtcaatgtca
      241 gccctttctt cactgtgtca agttaaacaa acaagatcaa ggcaaaggaa atggtaattg
      301 tctctctaga gatgagctgg ggataagagc agcattgttg aatctaaatg cagaaaattt
      361 tcacagattg tgtccagcat tagcaaaaag gagtatttat ttgcctaaaa tgaggagctg
      421 cagtgaagaa ccaaaccatt tgggagttta tgttgaaaat gggagagaag gttctggctg
      481 ctggaa
//
LOCUS       KCPA01003077             577 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 338584tic ultra-conserved element locus
            uce-5063, sequence.
ACCESSION   KCPA01003077
VERSION     KCPA01003077.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 577)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 577)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="338584tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>577
                     /note="ultra-conserved element locus uce-5063"
BASE COUNT          123 a          126 c           99 g          229 t
ORIGIN      
        1 ttttctgctt tctctgtgct cagcatcctt cttagtaatg aatgaatata taattttggg
       61 ggtaaaagag tgcaatattg tttcatgcat ctttattctc agctattctt tattaatctt
      121 tattctgctc tttcacttcc ttttcttttc atcttgtttt tttttttgtc tttatctttc
      181 ttttcttctg ctgccctccc agcttttcat tactgtcatc ttttttccca gccactgaac
      241 ccttgatgtt gttctaattg acagacgggg tttaaaagca cattcgaaag cgcctgtctt
      301 tttaaataga ctcctgtctc atcaaaagat gtacagcaac attccattag agcacatcat
      361 ttgaaaatag attgggcttt tagcaactgc actcatattt tcatagttag gctgttctgc
      421 tgggatcgtc cctccccttg ccagccccca ccatctcctc ttagggaggg aaagtggaaa
      481 agatacatta aagagagatt aacgaatttt gtttgggttt tctcctctgt gtggctcttg
      541 ggtgcttgtt ctgcatgttt atttctcatg gccacgg
//
LOCUS       KCPA01003078             485 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 338692tic ultra-conserved element locus
            uce-263, sequence.
ACCESSION   KCPA01003078
VERSION     KCPA01003078.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 485)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 485)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..485
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="338692tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>485
                     /note="ultra-conserved element locus uce-263"
BASE COUNT          179 a           95 c           71 g          140 t
ORIGIN      
        1 tttggaagca ctgattgaat aataagccaa gcagctcagt gtatcacatc tctattaaat
       61 tctcttgccc ttcctctaaa tgcaaatctt tctgtgtacc actgtgccta atctactaca
      121 actaattaat ctgtttgagc tgatgaaatg ttacctctgc attttttgtt ccttgtatac
      181 aattattgta acagtggtga ataaatcaat attcccaatc caactgtaaa aaacaatcaa
      241 gaaaagcagt gcttctcagg gaaaaaacac caaataatat ttattaactc tgtctcaatc
      301 cacagcagag cctaatacca ttcaagcatt ttctgcaagt gtaataagca aactcaaata
      361 catgatgaaa gtggcacatg ccaataattt caccatttta cactgcagag taattgaagg
      421 atttaatgag aaacaaacca ataaaaataa atagaccatg cgagaggagg agaaactgat
      481 ctaaa
//
LOCUS       KCPA01003079             549 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 338801tic ultra-conserved element locus
            uce-5231, sequence.
ACCESSION   KCPA01003079
VERSION     KCPA01003079.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 549)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 549)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="338801tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>549
                     /note="ultra-conserved element locus uce-5231"
BASE COUNT          135 a          123 c          147 g          144 t
ORIGIN      
        1 aaaacaggga agaaagcaga gcctttgcat tattccgtgc tccgtccgga gcgcaaatgc
       61 tctattttta cacaccttcc catctcccct gagccccgtc ccctcctcct ccgcccgtgc
      121 aggcaaagtt cttgaatcag cagattctga gcttgggagc ggtaaagagc tattgaggga
      181 cggactctga tagcattaca accatccatg gagccatttt ctgtggcgaa tcgctgagtt
      241 ctacctggtt atctcctgcc ttgcacatca cttccgaatg acatgctctc agtctgggca
      301 aaaaatgaga gttttttttt aagagctggg atttcaataa tatgtgacga aaggatgaga
      361 ttactttctg aggtgggaga aggcgaggag agagggagaa gagatgaaga gcaagttctt
      421 ggtcctttat ggagtttcac agcaaggcta ctctcttggt ggtaagctct tctttggagg
      481 gggctgggag aagccctcca agaagtagat gttcgtgcac tgcattgaga ttgtctggct
      541 gcaaagggc
//
LOCUS       KCPA01003080             459 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 338905tic ultra-conserved element locus
            uce-6339, sequence.
ACCESSION   KCPA01003080
VERSION     KCPA01003080.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 459)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 459)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="338905tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>459
                     /note="ultra-conserved element locus uce-6339"
BASE COUNT          137 a           93 c           75 g          154 t
ORIGIN      
        1 aaaaaatcac aaatctaacc caattagatt gttaaaattc taaataactc ctgtaagaag
       61 tttacatagg aaaccagcta ttatttctct aaaaatacta cctccatctc aaatgaatgt
      121 ttcttaattt cagtgtttga tgaatgactt ttgtttcccc tcctagcaat ctgactttct
      181 tgatccgtgt tcctaaagat cagttgtgca ggacatacag gtgttagcac agctggcttg
      241 ctgatgacaa ctctgtccat atagctgtct agtgtgtcat cactcatatt gttcagtgtc
      301 attctgacct agccaagcta aaaatggtac gccagctcaa gagggattta aaaaccttca
      361 caaagtaaag agacattgcc gaatgtcata tccatgtgct tttcagtttg gacataaata
      421 gctaagtttg atgcatttgt ctttatcttt cggtttcct
//
LOCUS       KCPA01003081             595 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 339014tic ultra-conserved element locus
            uce-2800, sequence.
ACCESSION   KCPA01003081
VERSION     KCPA01003081.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 595)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 595)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="339014tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>595
                     /note="ultra-conserved element locus uce-2800"
BASE COUNT          165 a          104 c          122 g          204 t
ORIGIN      
        1 tcctgcacaa cactaatgcc cattagtatc cagaaagcgt cggttgtatc caaagtttca
       61 aatcaatgaa aaatatattg gatttaatgt gtttggctta ggaaatttgt tttgtgtgct
      121 gcagcctagt gcagcttgct ctgagcttac ctctgtttga attagagggt ttcagctcat
      181 gtgcagctca gacactggcc cacaagaccg tgaagcgtag ctgatttttg gagaaactac
      241 taagtagttt ctatagtgat aatgatgtac tatgtgcacc tattgggaat atataaaatt
      301 agagagaatt tctgtttgct ttggtcctct ttctagaata attacaggaa ctgccattca
      361 ttcccattcc gttaccctga ttattctaga ataacctggt tattaaggtt taggcgtgtt
      421 taagaacata ctgcaaagtg acaacttgtc atgttggtat tatcaatact ttaaaatttc
      481 catattagtg acccaatttt ctcaagattc ctgcgtgttt aatttggtgg ggagaaggag
      541 ggaggggagt aaatgatgcc tctgcctttt ctctattcaa agtaacctta atttt
//
LOCUS       KCPA01003082             492 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 339231tic ultra-conserved element locus
            uce-1907, sequence.
ACCESSION   KCPA01003082
VERSION     KCPA01003082.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 492)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 492)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..492
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="339231tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>492
                     /note="ultra-conserved element locus uce-1907"
BASE COUNT          143 a           96 c          106 g          147 t
ORIGIN      
        1 catttgaagg ataaaaagga ttcatattac aataaaaatc atctccgtgc tcaccagcac
       61 aaacttcaca gcccagactc agctgtggcc agcaatccaa gaggagtcat tactgtaact
      121 aaattagacc gtttgttttc tttccctcaa atcgaattgt ggaggagctg ctttattgca
      181 aaacagacat taaaattcca gctagacctc cgagagaaag taatttctat tttatcagca
      241 ctgtaaagct gtctttatgt tctgaagcag gaaatattgc agggatattt atagctccag
      301 caccaaagcc agtttgaata gaaatgttac tgcggtcggc agagctgtca catcgctcag
      361 tggagcaggg aattttagtg aatttgtgaa ttaccctttc agtcttgaca agtctttcag
      421 cgtgtgtgtc tggagctgct ttgtgctttc gggataatga ttaaagactc ggcttgcttt
      481 aggaggagat tt
//
LOCUS       KCPA01003083             948 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 339342tic ultra-conserved element locus
            uce-1412, sequence.
ACCESSION   KCPA01003083
VERSION     KCPA01003083.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 948)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 948)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..948
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="339342tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>948
                     /note="ultra-conserved element locus uce-1412"
BASE COUNT          296 a          185 c          190 g          277 t
ORIGIN      
        1 aggagatttg atgcagaccc cgggcaaaaa agcaaagcaa acaatgagcc aatgttcgtg
       61 ctgcaacgtg ctgtttgact agtgttactc cccagtgtag agggagtccc ttgctggggc
      121 aaacacggcg cagggtaaag acagccctac tgacctgtgt gctgccgccg atgcttggtg
      181 agggcatgac gcgtcccgcc ggcgaagcca cagaggtcac agaggaacga cttctcgcct
      241 gttgcaacaa taaacagatg agggactgcg gaggtcacag atcattaaaa catatctatc
      301 aaggctttca gggttactaa ttcctccaat caaatgtttc catgtaaata tgtcaaatgg
      361 gaatgaaatt accactgcgg tttattgact gtgataaaat ctgaaaagca ccactgaaca
      421 taattacata cttgtcagac ccataaaaat tagctttatt atcaatggaa tggttttgta
      481 caacttcatt tctgttagat gtcttccaga tggggctgct ttatgcactt gaacagtttt
      541 tatgcatatc ctgatttttt acaattccca tacatctggc ctttctgtgc tgagtaaaga
      601 ttgcctggaa aaaaaagtta atatactgta tatatgattc tgcttaaata aaatatattt
      661 aatttactga caaattaaag gcactgagaa attttcaatg gactaggtca cagtcatctt
      721 tagttacctt ctatttatta ataagtatta aattattttc ttgaacacaa gaagagtgca
      781 ggcaacaata aaagccaaat tattcagtac cagtggcaat tcagcactgt ttatgtttct
      841 aaagttttca tgacataaag aaaacaggtc tggggattgc tgctgaaatt gcagcagaac
      901 tcacattgtt cgtcttcaaa tgataattct tcattccaaa cctctgga
//
LOCUS       KCPA01003084             605 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 339447tic ultra-conserved element locus
            uce-381, sequence.
ACCESSION   KCPA01003084
VERSION     KCPA01003084.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 605)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 605)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..605
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="339447tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>605
                     /note="ultra-conserved element locus uce-381"
BASE COUNT          151 a          124 c          135 g          195 t
ORIGIN      
        1 gctgttggac accttggctg tgtcacagca atctttgttc attgatctat ttggagtgaa
       61 gcaggatgtt aatgatggct tatcctttgt ggtgtaacaa gtacctttta ctaacccaac
      121 actgtaaaaa ttcccccttt tccctgccag cccctaaaac aatcccaggc agcgagggca
      181 gtgtgttgct tgggctaagg ctgggctgtt agctaaatta agccattgtg actcaaaatc
      241 ctcctttaat aaggttcatg ctgtctacaa cttcatcatt ttctgctgaa tgataattac
      301 tttattcaat catgttcaag gttttagtga aagctagcat tgattgatta acttcaatta
      361 ccatgcttac atttgcatag ataaaaactg cttttcaatt tgtgagtggc acgctggtgg
      421 aaacccggcg ctggtatttg catttcaatg tggatagtga agaataaagg tgggagagag
      481 gtctgatcag tgctaagccc tttctgcttc agtgctcgag catttttcca taaacactcc
      541 tgttatgatg ttggtttgct cgcgccgctc cgggagaagc ggtgtttaca aggctctgtg
      601 acaat
//
LOCUS       KCPA01003085             687 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 339664tic ultra-conserved element locus
            uce-5167, sequence.
ACCESSION   KCPA01003085
VERSION     KCPA01003085.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 687)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 687)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..687
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="339664tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>687
                     /note="ultra-conserved element locus uce-5167"
BASE COUNT          177 a          184 c          143 g          183 t
ORIGIN      
        1 tttgactttc tagagggcac aaaatataac ctcccgtggc cgcacactcc cattgttctg
       61 ctccctgcgt tctcggctcc ttgcctgcag atgtcgagat ccttgctctg catccatgtc
      121 aagttcaagt acgggaagtt tagctccacc tccaagtcac ttgtcagtaa aaggttgggc
      181 gatttattga ccagtgcagg acgcctactg tcagtgctga aggaaatatg agccagggct
      241 gtcgctactg ttctggagct cattgataat gacatacctg cctctgtcac ccattaccca
      301 tactacaaac tacttagacc taactgaaaa atcaatagcc tacttgcacc ggttcctgtg
      361 gctgcctcct ttgactgtca gctcctgtct agggtcagca cttacatgaa aggggctgcg
      421 actgcctgat gctttcagga caacctaacg atatgaaact agccaacaga acagtaaatt
      481 ctgtccccct gccctcctca tcaattaggc tttgactagg cttgcctgta gaaacctgac
      541 cttttaagtt taggtgaata tggaactagc tgaacacgcc attgccctca gcactgagcc
      601 aggaaatcca ctgacaggtt aaacaaaaca gaaggttgta actgtcataa tttgcattgc
      661 actttcacgc caacaagggt gttatca
//
LOCUS       KCPA01003086             652 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 339775tic ultra-conserved element locus
            uce-5701, sequence.
ACCESSION   KCPA01003086
VERSION     KCPA01003086.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 652)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 652)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..652
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="339775tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>652
                     /note="ultra-conserved element locus uce-5701"
BASE COUNT          200 a          187 c          149 g          116 t
ORIGIN      
        1 agctcggctc atcccaaagg ggagcagcgt gctgctggga ggggaaaccc aaaagccaca
       61 gagactgtgc gtccagaggt gtttcctagt gttttcaatt ccttattccc ctttaaagga
      121 agagatggta ttggaaaagc cccttccgtg tcccctgtca tgccccgctc ccggccaccc
      181 tccacagcac ccacaccatc ctttcggaca tggatcaccc ttacctattg agctgaggag
      241 aagcttgtct cgacaacact gcccagatag ctgagattaa tcaaaaacaa agcagttatc
      301 aacacccgca aggagccgag ctccgcaaca catcagcacg tcaacaactc caaaaaggag
      361 ggaaagaaac caaactgaaa cgaaacaagg ctggagaaga aagggggaaa gaaacagaag
      421 agaaaggaag aagaaacaaa aacgataatc aacaaagcga atggatacac tgcataaaag
      481 cacggacaac agtgcgctct aacacggctc agtcctggag ctggctctcc gctagagaca
      541 tggaccagct acatccctga ctgcattgct ccgtagctgg gttttccaga ggcacacaga
      601 agtcatttca ggctcatcca gctgctcttc cccatcctct ccccctgagc cc
//
LOCUS       KCPA01003087             584 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 339886tic ultra-conserved element locus
            uce-6424, sequence.
ACCESSION   KCPA01003087
VERSION     KCPA01003087.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 584)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 584)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..584
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="339886tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>584
                     /note="ultra-conserved element locus uce-6424"
BASE COUNT          185 a          114 c           90 g          195 t
ORIGIN      
        1 aaaaaaaggt gtaatatgga gaacgacaca atgcttctta aaacacagtg atacccaggg
       61 actctcactc tctctttaat gatccactgc tctcattcag ctgtctttct tttttcaaat
      121 ctttacatat gtgacagctc tcaaaagtag accatagacc atctggcatt ttccgaggtg
      181 taacttgtgc aaattcagct ctactgggaa cacaatgcta tcttctgcct gcgttataaa
      241 agatacaata gaatgtagaa cttatgagtt gttttgaatt attcattttt tgcctgtata
      301 ttcaagaaat tttacaaact ctgcattttg tactacataa tcacatgcgt taaaggtaca
      361 aagaaacttt ttgacacctc ttttctacag aaagatggca ttttgtttga tatgtgaaca
      421 ttcagcgcct gttatatcat tctaaacagg ccgtgtgctg ctacaaaaga tcccatttta
      481 cactctatgt atgagcaaaa atgttattct tgatattcac taactaatgc aatacacatc
      541 aaaatttcaa atgtgtgttg gatgaacatt cagcatcgtc aaat
//
LOCUS       KCPA01003088             528 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 339994tic ultra-conserved element locus
            uce-532, sequence.
ACCESSION   KCPA01003088
VERSION     KCPA01003088.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 528)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 528)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="339994tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>528
                     /note="ultra-conserved element locus uce-532"
BASE COUNT          185 a           95 c           82 g          166 t
ORIGIN      
        1 gtgggagagg ccagttctag ctgtagttac actctaacgt tactgtaaag caatatcacg
       61 ctgccatgca atagctcttt aatgtcaacc ataaccttca taaatgggtt tgtaacgaga
      121 aacccttgtt tgtcattcag taggcatgat tgatgctatg tgagtgaagt gtagccacag
      181 tgaccatctc aataacatga acagctgcca aatattcatt tagcagaatg agtttaaaaa
      241 actttgagca gattgctttc acaaggctgc tttcaacaaa aggaaacata attaacgagc
      301 taatatcagc atgtgtctgg ctaagctaat gaatatcaaa ttacacagaa tcctgtataa
      361 atcatcatta tcctgaattt taattgaact tgcaattaaa catgacaaat tttatataca
      421 ctaaaccttt aatttatact ttcaaataag aaataattta tcatttttag tatttcatag
      481 ttaatttccc aatatgtaca cttctaatta acaaggacag acaggcct
//
LOCUS       KCPA01003089             532 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 340101tic ultra-conserved element locus
            uce-157, sequence.
ACCESSION   KCPA01003089
VERSION     KCPA01003089.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 532)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 532)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="340101tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>532
                     /note="ultra-conserved element locus uce-157"
BASE COUNT          128 a          179 c          123 g          102 t
ORIGIN      
        1 tcaaacacaa aaccccagca gataacagtt atgttacgtt ctcacccgta aatgcgcctc
       61 tgcctagagc aggaagaaaa gccaccagga atttccaaac acattttctg gccaaacccc
      121 gtgcacttcc cgggatacat tctataggtg cctcatgggc ggcggagggg gccgctcccg
      181 atgccacccg gggctggaac aaacagccgg acccgaacag ctcaagatgg cgatggcagc
      241 agcagccagt aataaggaag gttattcaat cccattagcc ttttagccca aagaacccct
      301 cctcctccca ctcattcagg ctctcactta cccttcctct tggcctcttc actgaagaca
      361 ttttggcgtc agacaaagac ttgccctccg cttttccagc acccccggca gtgctcagga
      421 gacaagcatg gggagaagat tgctaaatgg cctatttagc gagcggcagc cgggccgcgc
      481 acagccctcc ccgagcgctc gtccgcttca gcagcatccc cgcgccctgc cc
//
LOCUS       KCPA01003090             553 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 340210tic ultra-conserved element locus
            uce-5692, sequence.
ACCESSION   KCPA01003090
VERSION     KCPA01003090.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 553)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 553)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..553
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="340210tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>553
                     /note="ultra-conserved element locus uce-5692"
BASE COUNT          144 a          118 c          104 g          187 t
ORIGIN      
        1 tttgcagttc tagactcacc aacacttccc atgattgtac aagattggtc ttgttggtct
       61 catttacttt ttcctttctc cttgcaagta gccctgttgt taagctgttc tgtgaccaaa
      121 tgaaataaac aaactattgc cttaattcct ttcagtggct gcatcaactg ctaattccac
      181 agctggtgcg gccatgaatt ctttgacttc tctgggtact ctccaaggac tggctggagc
      241 cactgttgga ctgaataata ttaatgcact agcaggtacc gtaaacagtg agtatttatt
      301 gctgtggtgg acagccttcc ccaataatca tgccaccaat tgtaaagtga taatatgatt
      361 ttaatctcta caccaaataa ttcgctttca tactactaca ttggagtctt ttagtttcac
      421 acagtttgtt ctgcaaagtg aatttccttg tgtccctgaa taaagactcc tcttcttgca
      481 ggaaggtaaa agaattgtca ccagggattt ggttgtctag gttataggaa aggctccttt
      541 tttgacaaca gat
//
LOCUS       KCPA01003091             616 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 340321tic ultra-conserved element locus
            uce-5397, sequence.
ACCESSION   KCPA01003091
VERSION     KCPA01003091.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 616)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 616)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="340321tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>616
                     /note="ultra-conserved element locus uce-5397"
BASE COUNT          166 a          144 c          137 g          169 t
ORIGIN      
        1 gcacacctgc tatttcctac cttctttcat aaaacagttc catcaaggaa gaactctgcc
       61 acattctttc ccgactacct aaatgttggg ctgcacctaa actgggctcc atccagccct
      121 ttgtgctgtg gtgttaacat aagagctgct ctcaaaccag aagaacctgg catggcaggg
      181 gttaatggga ggggagggtg agactaaaga aaatagcccg acacccagct tgtttgatgg
      241 agatgcgacc tggcagcatt gaaaagcttc aagattaatg gagaaaaggc ggaatctgac
      301 agcttttccg ctggtttcac tcctcctggg tgggccgatt gctcttgaat gtcacttgct
      361 acttaatctt gtgtatctga aacagactga tgtgtttggg gagccctgct tgctctgtat
      421 agacatcaat tggcaaggca gataaaagga aactgcattg aattactctc ttatgccttt
      481 tatagagcac tttctgacta caaaataatt agtagcctca tccaacgaaa cccatcattg
      541 ttagggtgct cgttaaacgg aggagaaagt attgcttact ctcttctagc tccttcctgg
      601 agctaccatc aaacca
//
LOCUS       KCPA01003092             498 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 340429tic ultra-conserved element locus
            uce-2899, sequence.
ACCESSION   KCPA01003092
VERSION     KCPA01003092.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 498)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 498)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="340429tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>498
                     /note="ultra-conserved element locus uce-2899"
BASE COUNT          152 a           89 c           99 g          158 t
ORIGIN      
        1 aaattacaga ggaatcaaag tgaggtatta gcacactgag taaaatatat ggctgcaacg
       61 cctcccccat ccacaatcaa ttggattctt ttagtttaat atttacttgc taagatgaga
      121 tgctagtctg catggtgata aacagtctgc tactggcatc tgaaggtgac ctgtcagttc
      181 atatggacaa atctcctgct tactgaaatg tacaaaataa atcattaaag caggcaggtg
      241 ctcattccca gatttaaatc accacagatt tatgatttga attaatgctt catttggtca
      301 tagaaattga tgctgagaca aatgatatgc agtggttggg gcttccatac tgtagccatc
      361 ctaatattga ttactgagat gtctttgcaa tctcttgttt atatcaagta ctgtcttgtg
      421 acagcttggc tgatatgagc tacattgcag ataagaagga aaaatgtccc gggttctttt
      481 tagtggcaat tctacata
//
LOCUS       KCPA01003093             585 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 340539tic ultra-conserved element locus
            uce-4325, sequence.
ACCESSION   KCPA01003093
VERSION     KCPA01003093.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 585)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 585)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="340539tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>585
                     /note="ultra-conserved element locus uce-4325"
BASE COUNT          173 a          118 c          101 g          193 t
ORIGIN      
        1 ttttatattt gtttgcatga ctccaggata gtatttataa agttttgaac atttactcct
       61 atctgaaatt ttctttcagc agaggggaga aaaaatactt agctttgaga ctctttgaac
      121 atgccttttc ccccattcct ttcaagtttt atgctatgaa atattttctg ataacaggcc
      181 tcatttctgt ctcagctcca caccagtaag gttttaatac tcagcgtgtg atgagagatg
      241 aaaccaagtg tgaacaactt ttgggtccca tgagtaggct gactgttgaa gctgtcagat
      301 tcaattgcat cattccacat tattcaatgc cccaaactgc tccctaattg ttagaggctt
      361 aacatattca aaaccattgt ttaggctaat gctgaaatgc ctacagttga gtttccacaa
      421 agaaagggga gtagttaaac cattactgaa ctgtcttcct ttcgtgatag ggcaacaagg
      481 atggccggaa caaccaattc caagacagct tcttaatcag tttatatcca atcaacactg
      541 ctttaaaaat gtcattgcta tattgtagct atcatcataa tgctt
//
LOCUS       KCPA01003094             744 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 340650tic ultra-conserved element locus
            uce-1925, sequence.
ACCESSION   KCPA01003094
VERSION     KCPA01003094.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 744)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 744)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..744
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="340650tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>744
                     /note="ultra-conserved element locus uce-1925"
BASE COUNT          193 a          175 c          155 g          221 t
ORIGIN      
        1 acgctcacag caaagcttgt tctcacagcc tttatgtgga tctctgtttt tttggatcta
       61 ctgtctggat ggggttctta gacaccaatt tcaaatgatc caaacagtaa tgaagaggct
      121 actgtgcaca caatagctcc tggttgctca tatgtgtggg ttcctccagc ccatgaatac
      181 agatctgtaa gaagcaccat ttaatggtta gtgtgggttt ttatctgaaa tttaccaaag
      241 ttttatccca gctccctgga gtcctcccca agtctatcta aaatgcagtt agagcagagg
      301 ctgtcttttg cttcacagag cgtctgcctt atgctttcat cagagtagtc taactcacac
      361 agatgcacta tttaacaatg ccatcccctg ctttcatcag aagggggaag gttgcagagc
      421 tgagccctga agaataaggg gggcaggtcc cctgtgatcg gcgaaagctg aacatcggtg
      481 ccagtttcca tctgtcatga tagcctatct ccgaaccttc aatctgtcaa aagcttgctg
      541 cctagctgaa ggctccagga gatttggtgc actaaacaca tttgacaaca gcattatcac
      601 tgcaaggagc ccagcaaaat gccatcaatg tgttaattgt agccagctat gtaaaatgtc
      661 atttcccata tcattttaca gcggctttgc ctattttgca gctcctaatt ttccaccctt
      721 tataaatacg tggattgttc atgt
//
LOCUS       KCPA01003095             556 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 340760tic ultra-conserved element locus
            uce-6723, sequence.
ACCESSION   KCPA01003095
VERSION     KCPA01003095.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 556)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 556)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..556
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="340760tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>556
                     /note="ultra-conserved element locus uce-6723"
BASE COUNT          163 a          128 c          109 g          156 t
ORIGIN      
        1 tggccccgga ctggccctgc ccgctgcgcc ttcgcttttc caagggctcg attccccggc
       61 agccggcaac aggaataaat tacgaagccg cacttaatgt tagtgactct ttaaatggaa
      121 tttttcattc aaactttgtc aataaaatag aaaggccttt tggttgtgac catacgggca
      181 taataaattg tatatgtttg cgatgctgaa tgaatcttgc ccatatgctg cactgcaagg
      241 ctacatgaat gaagcattta ccaaatcagg cccaccacat taaacagaaa aacaatcttt
      301 attcatggta acttatcagt ttcaattaat caacctcaac aatagaaatt ctgatgtgtt
      361 caagcaactt gaaagcaata ggtcatctcc agggcagcca tgttgtgtct ttgtgcctat
      421 ggcttcaaac aaagcaacat ctccaataaa tgtacatccc cacacacaga tgtgtgacta
      481 tatctgtata aacatccagg cgcactgaag gccctggtgt acacgtacgg ctgtgcgtag
      541 aagtgtttat ttttgt
//
LOCUS       KCPA01003096             545 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 340866tic ultra-conserved element locus
            uce-99, sequence.
ACCESSION   KCPA01003096
VERSION     KCPA01003096.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 545)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 545)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..545
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="340866tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>545
                     /note="ultra-conserved element locus uce-99"
BASE COUNT          195 a          110 c           64 g          176 t
ORIGIN      
        1 gcaattacca gaatttcatt ttcattaact aataaaccaa aacaatttaa gtatctggat
       61 gtcatttttc aaaggaaaat aaactgtaaa catttgaata acatcacagc agggataata
      121 tacctaagga aacctattga aatatgctgg agaattcctc ctctttcatc acattaaaac
      181 tgcaattgac tgtaaacctc ctaccactct ccgctgagac tttaattgta aagattcctg
      241 ttacacatca tattagaatt tagttaaaat tgtagaacac attatttcca atcagacagc
      301 caaccatcac tcacaaagat ttttaaaaag gtgattaata attcatctca gataaggaaa
      361 agatctatat ttataccatc ttctcagcca ccataaacta cctgacaatt gttcagtaat
      421 gatgcccagt aaattcttta aaatggtaat ttgtcattct gtcacttcat ttgtgaccta
      481 aaattcctca cttgaggcat catcaaataa attaatcact ttccaggatc catttctctg
      541 ttctg
//
LOCUS       KCPA01003097             350 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 340972tic ultra-conserved element locus
            uce-6313, sequence.
ACCESSION   KCPA01003097
VERSION     KCPA01003097.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 350)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 350)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="340972tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>350
                     /note="ultra-conserved element locus uce-6313"
BASE COUNT          150 a           46 c           69 g           85 t
ORIGIN      
        1 tcccaaggct ttctaattga ggagtgatcc tgcagcatgg atagaaatgt acagaacagg
       61 gaagaaaaag aagccactga cacagcagaa gaagcaaatt cactcatcaa gatttgtgtt
      121 taaattattt gaaaatatac tgcatctgtt taatgtttaa agcaaaagaa agtggaaaag
      181 taactgagca tgagatagct ttcaataaat aatcatggag taaataggta aatacgcatg
      241 ggagcactgc aaatgcacaa gtagttttgt gccaataaaa tgcaaaggat aaaaataaaa
      301 tacaatacag ctgcaaaagt atttatataa atcatgaaaa tgtaaggaaa
//
LOCUS       KCPA01003098             746 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 341079tic ultra-conserved element locus
            uce-2911, sequence.
ACCESSION   KCPA01003098
VERSION     KCPA01003098.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 746)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 746)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..746
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="341079tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>746
                     /note="ultra-conserved element locus uce-2911"
BASE COUNT          157 a          199 c          196 g          194 t
ORIGIN      
        1 tctccgaagt ccctctgccg ctgctacttg cttaaggatg cttctgaaat gatttctgac
       61 cccaactgcc cttagctgag aggctctttt ctccagcagc tggccctgaa tgaattaaac
      121 aggggatcct gcagagccat gaggatcctc cagatggacg gttccgtgtt gctgaagcct
      181 ttcacggcac tttctacagg actctagtta aaagattacc taggcaagct gattgagtgt
      241 aaaacgtgct gtacctgcaa tgttctcctg cttggggcaa attccttttg taggcgtgag
      301 aagacggtct tcttcatcgg gtgtgacttg gatcccgatt tccactggct ctgacacttt
      361 cctgagctcg gcgcgtgagg aggggggagg gctgctctta tccatgctct tttcatagca
      421 gacaccacca gtgccattgc actgttttct cttgtgctct ataaaaacca agatgtctcc
      481 cagcgggaag ttcatctgac actgtccaca ggttaacaag tcggggtctg tcccgcctgc
      541 ggcgatgctg atgccgcctg ggtctgctat tgccaggctc tcgtcctcgt cggccagtgc
      601 cggttccaca tggtcagcct ctgctttgca tggacaagga gaaagagggg gagaagagag
      661 agagattgct ttgagtgttc actgaaggat gcatcaccag aggcccagcc tccccccact
      721 caaaggagcc aagcctgatt agatct
//
LOCUS       KCPA01003099             689 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 341188tic ultra-conserved element locus
            uce-5554, sequence.
ACCESSION   KCPA01003099
VERSION     KCPA01003099.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 689)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 689)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..689
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="341188tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>689
                     /note="ultra-conserved element locus uce-5554"
BASE COUNT          234 a          164 c          112 g          179 t
ORIGIN      
        1 agtaatgaat cacagctgtg gacagctaat ctgtatgctt atcacagcaa atcctgatgc
       61 tctgtatttt tttaacactt tgcatcccaa aacaactcat aaaatataaa acttaccggt
      121 gccatctaac aagcatgctt ctgcaaattt actgaaaact ttatgaaagc gtataattca
      181 ctaattccta tttataagca aagcatagga aagccccttg ctaaaaaggt agtaaaacaa
      241 acaaaaaagg cctcattaaa tatacgaaaa cgttttgctt ggaaggactc aaaagggtta
      301 ttttccctat ggcctctcaa taaaataacc ctatctgccc ccttcaaggt tgccctcccc
      361 ctattctgag tcaagcgacc tccgacccct tggagggcaa agacatgact gatccattct
      421 tggtaaactg ctaaactcat tcccttcccc caaacaggca tgactactac gacatgtcaa
      481 caaatcctta cggagggaat gaaacaaagc aaagccagcg gctcattaaa accgcagtgg
      541 agagcccgcg gtaccaaatg ccaatcggta aatattcaca ggattattaa atgctgcaca
      601 agttctctaa cgggatctct ttcacacgaa cttgtatgta atgcaatttc atgaattatg
      661 caaataaagg tttcaactat tcacgacaa
//
LOCUS       KCPA01003100             599 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 341298tic ultra-conserved element locus
            uce-8045, sequence.
ACCESSION   KCPA01003100
VERSION     KCPA01003100.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 599)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 599)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..599
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="341298tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>599
                     /note="ultra-conserved element locus uce-8045"
BASE COUNT          208 a          142 c          107 g          142 t
ORIGIN      
        1 aacctggatt atcagccaga ctgctagcca cactcaggga gggaagagtt gatgcccccc
       61 aacagaattc tgcccaaagc aaaacagcaa agcagcagaa taagaagagg aaactacttt
      121 ttcctctgtt gctgtcagct catcagttct aaaatacttt gaacgtttga agactttaaa
      181 tcaaaagatc tggaaaacaa acttacatga gtatgttcat aaatacagtt gtcaataaca
      241 tctgcaagag ttgctccttc atccaacaga ccaatggagt aatttgcatc ctcaagaaat
      301 cctttcatct cagccgtatt ccacaaagcc gacagtcata aaccaagaaa cacaagggat
      361 gggcttccaa gccttatatc cgggtcctta aattatgcaa caaactgcac aaagaaaaaa
      421 agaggcacaa cagctttcta cacctgatga cctacaaaca gtaactcaac tctgttcacc
      481 cgtcagagat aagatagaat cctgctgaag ccaagagaag ctgggtactt taaatctgat
      541 actagcttcc caaggctgtt cttgagaatt ccagtgcaca ctgatctgca ctgaattta
//
LOCUS       KCPA01003101             643 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 341409tic ultra-conserved element locus
            uce-268, sequence.
ACCESSION   KCPA01003101
VERSION     KCPA01003101.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 643)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 643)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..643
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="341409tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>643
                     /note="ultra-conserved element locus uce-268"
BASE COUNT          192 a          136 c          153 g          162 t
ORIGIN      
        1 aaaaagcagc gccgaaacgg tatgacaact gcgagggtgt gctgcctctt cccacattcc
       61 tggcgagaca gatggtgtta catgggacac agggaggttt gttcaaacag cagcaacctt
      121 caaagatcaa gcagagccca gcccgccgcg cgccattgag ggacccgtgc tcatatgttg
      181 ctgagttgca taaacaaaca gcaacagctg ttttgtctcc ccccatcgcc ctccaaggac
      241 tactataaac tttagttgtg ccactgttaa tatgatacaa tcattttaat ttactaattg
      301 taaatgccat gagcaaatga ggggactttt caacaccaaa gctaccattc ataatgcgcc
      361 agtaccagcg cgctctcgca tgtgaaattt caggcagtta cgttggataa atatccaggc
      421 gggccctccc ctggtgtttt taatgatact aggcggaaga aacttatggt ggatcaggtt
      481 ggatatacat gggaaaatgt gtttgtctac tggaaaagcc atgggaagga aagaatagga
      541 gaaagcgctc tggagtcact tatattgatt taagatcaag caaaagatag agttctctta
      601 aaatgctaat tgcaaaaatc gcgtgattag gaagatgtgt gtt
//
LOCUS       KCPA01003102             566 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 341519tic ultra-conserved element locus
            uce-110, sequence.
ACCESSION   KCPA01003102
VERSION     KCPA01003102.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 566)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 566)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..566
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="341519tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>566
                     /note="ultra-conserved element locus uce-110"
BASE COUNT          243 a           97 c           84 g          142 t
ORIGIN      
        1 acagaatgat cgagagctac acagagaaat gctttcaaaa cacaagcatt ttttaaatgt
       61 taagtgagat gtaaatatgt atggtagcaa caaagtgccc aaaagcatac tgaaaacata
      121 ttccatacac agttagcaat agaagtctgt acaaaagtaa taaagttaca caatataaaa
      181 aatactccat aactataatt taaaagaggg aagggaattg atttctcagt tcatataatt
      241 tattgcagtt agcacacagt ttaaaaattc accaacacac caatagtaca aaactaaaca
      301 gcattataag ttattccctc ctcaggaaaa taaaacatac tatgattgtc aaagctagat
      361 gtcagtctaa gttttagaac aaaagaagaa tgtgaaacta aggaaaggaa aaaagcaatc
      421 actcacgagg accacaaaaa aatccaagag aaagtccatt ttcctcagac actgattgtc
      481 ttttctaact taagaaaaga atgtagtttt aaacctagaa actattcaag taactaaaga
      541 taacgctcca aggccatttt cacagc
//
LOCUS       KCPA01003103             495 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 341631tic ultra-conserved element locus
            uce-690, sequence.
ACCESSION   KCPA01003103
VERSION     KCPA01003103.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 495)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 495)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="341631tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>495
                     /note="ultra-conserved element locus uce-690"
BASE COUNT          160 a           86 c          103 g          146 t
ORIGIN      
        1 gtctcttcag gaaaaatact actgttgagc tgtttgggat tctttctcac tggagcttta
       61 aaattctaaa gaacagataa gagcaaacag caaataactg gatttagaat aaactcagaa
      121 attatcgcta aggcccttcc tctgccacaa tttgtcaaat ctgctgatag gaaacaaatt
      181 ctattcataa agattttatt tttttggggc cctcttgtga tttggtagca attcaattat
      241 agttttgtga gatagtgagc ccggagaggg aatccagact gacaagaaat atgacaggac
      301 agttacagag tgtttatgca attaaacttt cactgacaat acctgcagaa tgatgaatgc
      361 gtgggcggag gtatgtgtgc acaagcaatg ccccacaagt attgcacatt tttcattatt
      421 atacaactgt tcagatcttt caagaatagc ctgaagtgaa gtggaaaaga gagtgctgtt
      481 ccacagcatg ttaac
//
LOCUS       KCPA01003104             449 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 341740tic ultra-conserved element locus
            uce-6987, sequence.
ACCESSION   KCPA01003104
VERSION     KCPA01003104.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 449)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 449)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="341740tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>449
                     /note="ultra-conserved element locus uce-6987"
BASE COUNT          120 a          100 c          101 g          128 t
ORIGIN      
        1 agctttacca atttagcttg ctttctactc ttattggtgc ttaagaggtt aagactttat
       61 ttgtgaaaac ggggaatctt gttgtctgca gcttcctaag tcttgcttaa gatccttttc
      121 aattaccatc catttctcct ttaaaaaggg acatagagga gtggaagcag gtcagggcag
      181 cctgtgacaa tgacagtgtg atgggctcgg gccccccgtg gcgtttccat ctgctatcat
      241 taaggtgact attcagacat gaaaaaatcc ctctcgctgt gctgacaggc agacatcaag
      301 aactatgaca aggcattaag acagaaagtt gtcatatccc gcaaacaatc ctgcctcttt
      361 tatcggaatt tggggttatc aaacctcgca ttagtttgtc aaggaagatg ctgctgacag
      421 cagcagacac gcttagctcc aacctggag
//
LOCUS       KCPA01003105             482 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 341848tic ultra-conserved element locus
            uce-7533, sequence.
ACCESSION   KCPA01003105
VERSION     KCPA01003105.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 482)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 482)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="341848tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>482
                     /note="ultra-conserved element locus uce-7533"
BASE COUNT          121 a           82 c          110 g          169 t
ORIGIN      
        1 caatggttga atgaattttt aggaatttta aacttggttt gatcattaat ttctagtttt
       61 cttgagtgtg gggtagggga actcgaatgc aacgtgactt tcagtgatct ccgagctgtg
      121 ttttagggac tgtgtgttgg tggctcacag ctcactacag tacaggatat gatctcaatg
      181 tagtgcatat aaaactgcag attgattttc cttgagtgct ttatactgtt taattacatc
      241 tccatgtagg gctgaaaaaa atgacctatg tttatatata actgtgttgc ttttgatgtt
      301 gtgttctggt cggtgcgcgc tgaggtggtc caggtacagc acgatagccg cgcgagttca
      361 gtactgcttc cgttcattgt ttacgctgga attttttctc cccatggaat gtaagtaaaa
      421 cgtagtgttt gtcaccaata aatggtaata ctaaatggtt aatttattcc tacaccacca
      481 ca
//
LOCUS       KCPA01003106             753 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 341959tic ultra-conserved element locus
            uce-1832, sequence.
ACCESSION   KCPA01003106
VERSION     KCPA01003106.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 753)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 753)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..753
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="341959tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>753
                     /note="ultra-conserved element locus uce-1832"
BASE COUNT          232 a          159 c          134 g          228 t
ORIGIN      
        1 tttgcacatt gagaccaata aaggcacatt gagaggaaag aaagtactcg tgtcaaacca
       61 cacgtgtaag ctcacaaagc tgacatgcct tcaccatgtg taaacaggaa atctacctgc
      121 attttagttg ctctctagct aaaccccact ccctctagga aaagtgtgtt cagcagtatt
      181 agagtttgtg cttattaaat aaaaagaaag gatcaccttc aaccatatta atgatggact
      241 ggtggatgaa ggatgtctgc gaaaattcac aacatctgtt tgctccactc tcttctcagt
      301 gtgctgcacc tattcctcat gcttaatgat gctcatccac tctgcaagtt ttacgaacaa
      361 atgtgtgttt agccacattc atcattctga atgagcgttc ttgatgaagc atccactggc
      421 ctgtttcgct ctttctgcta cactttaaca aatgacaact gctctacgta tttttcattt
      481 gttaaaaata aaaagctaag tgaagaatag gcccagcaaa tttttcttat actcctctgt
      541 taactttact ggaaaatgga atacaacgtg catttaaact gcatgcaagt tcacatgcac
      601 aaatctaaat ggtgcatata gatttttaaa agtactacac agcagaatag cataggagac
      661 gaacattcta tccaacagga gcaattccat cttcttatga aggtgatgta tttctcactc
      721 tgatcagctt ggggactgat tctgtgatgt tca
//
LOCUS       KCPA01003107             519 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 342071tic ultra-conserved element locus
            uce-5334, sequence.
ACCESSION   KCPA01003107
VERSION     KCPA01003107.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 519)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 519)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="342071tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>519
                     /note="ultra-conserved element locus uce-5334"
BASE COUNT          175 a           98 c           94 g          152 t
ORIGIN      
        1 agacagaaga gaggggtaac ctaagctgta tttttctgta attttgtcaa taaatgtagc
       61 tcttaaaaat ttcaaccaca tctttctaag gtaacattta cctcctcaca tctttagcat
      121 ctatcagaca tgacatggga catattcatt gaccctaaaa attttcatca gtctcatgca
      181 ctggaagggg gcagccccag ccagacaaga ggctcatttc aattttaacg gctgtaatta
      241 aaggttaatt cactgagtca ggattaacga ggaaagtaca aatgataggc aagcagctgc
      301 ctttataata caggattaga acaatgcaat tacaataaga attagaaaaa accaacttcc
      361 tgaaaaggtt ctgtaataaa tgaactttct ctgttcttaa ttgtggttgt gcagcatatt
      421 gttgttgtaa taacagttga tcaacagtgt gagtatgcca accgcagtga cagcaactgt
      481 taacatttaa tactgtgctc cactgaaaac cttcagact
//
LOCUS       KCPA01003108             491 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 342177tic ultra-conserved element locus
            uce-6390, sequence.
ACCESSION   KCPA01003108
VERSION     KCPA01003108.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 491)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 491)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="342177tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>491
                     /note="ultra-conserved element locus uce-6390"
BASE COUNT          167 a           82 c           96 g          146 t
ORIGIN      
        1 tttgcattat gaaaagaaat atacaaaacc ttcattacca aataggaata tcattgtcaa
       61 agacttaaca tttactagaa ggcaatttct tgaaaacctg gttttaattg tgcatacata
      121 tttttattca ttaaaatgag caaccaataa agtcccacac tatggtgtcc cagcctcata
      181 acacattaat aaagtttctt aaaggttttg gcagggggcc agcacagtcc attaactcct
      241 tgcaagttgt aaaaagaagt aaagtcattt tgggctgcct tgtggttatg aatgaaacag
      301 caggcagtct gtatggaaac gtcactttgg atatggcatt ggtaatggat gctttgctgt
      361 tcaatcaaag cagcatgggg ataagttaat gcactgaatc acagtctaaa tcctgaggaa
      421 ctgcaaaact aatttagtta aaagtggaag gaaaatccaa gttatgaagc cctgcgtatt
      481 ttcttagtag g
//
LOCUS       KCPA01003109             570 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 342283tic ultra-conserved element locus
            uce-2096, sequence.
ACCESSION   KCPA01003109
VERSION     KCPA01003109.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 570)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 570)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="342283tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>570
                     /note="ultra-conserved element locus uce-2096"
BASE COUNT          157 a          102 c          108 g          203 t
ORIGIN      
        1 ttctttctta tatgggtgct tgaattactc atagttattt ttgcttcgtt ttgctaactg
       61 ctataaaagg gaaaagcacc tagtgcagac ccctatattt gagattttta cctttttgac
      121 agctgaggag acgttgaatg gaacatcata ttccttattg taaaagtagg atcataatta
      181 taaagctagc tgcattcatt aggcagagct gctttaaacg caagagtctc ttcatctcat
      241 cttaatcatt atattacaaa gtaggcattt ctgtctgcct agtggcatgt cttgcaaaag
      301 aacgagagag tttttgaagg caaaaagaag aagggggcca attatcggct tctgcttccc
      361 tgccacctgc cagcgctttc cttttaatta atgatctgat ggcactggtc aatataataa
      421 gaaatgcttg tacagttggg gtcagaaaat tcaggctttg atcttcttca actttgtgaa
      481 acatttattt gttttctcta aattatttca gttttatttt aatctcttct atcctgctga
      541 gggctgcgtg aatgaaaacc tatactgttt
//
LOCUS       KCPA01003110             659 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 342391tic ultra-conserved element locus
            uce-7010, sequence.
ACCESSION   KCPA01003110
VERSION     KCPA01003110.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 659)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 659)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..659
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="342391tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>659
                     /note="ultra-conserved element locus uce-7010"
BASE COUNT          216 a          115 c          124 g          204 t
ORIGIN      
        1 agcatgtaac acatttcaaa gagaggagaa acagaaacaa ttgtgattaa tcgtgctcat
       61 tatcaactca gacttatgac ctgcgtaaat tttggtggat ggggggaggg gtgcatatgt
      121 gtggaatgag agatgaaaaa tacactcctt tctctgccaa taaaatgacc cttccaccct
      181 ctcacttttc agccaaaagt taggtgggtg tctaaggctg gctaaagcct tattattaag
      241 ttaactctag gtggtttcca ttagccttac agtacatgcc actgagcaga catacagtaa
      301 ctgaattgtt tcaacttatc caaataacat tgaaatagac ttaattgttg aactgcagga
      361 aagaccatgt gtctccagag actattagtg tcatttaaaa ggctaaatgt atcataaaac
      421 ctgtctttaa cagaataaaa ttatacagac caacacaatt ttagctaatg ttttccacat
      481 ttcttgtaaa gtcattggtt gtaaaagaaa gttcataaca tttctaggag ttgtttcagt
      541 gcagcacttc ccaactagtt ttagctgagt tttttactat cgagcaattt tctttgaaaa
      601 taggcaaagc ctgaagaact tacagaacat ttttctattt attgtgagta aagagaggc
//
LOCUS       KCPA01003111             548 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 342493tic ultra-conserved element locus
            uce-2400, sequence.
ACCESSION   KCPA01003111
VERSION     KCPA01003111.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 548)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 548)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..548
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="342493tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>548
                     /note="ultra-conserved element locus uce-2400"
BASE COUNT          136 a          122 c           96 g          194 t
ORIGIN      
        1 cctgcatcat taattgattt cttccataca ttgtgctatg atacaatttt tcaaggctgt
       61 gcataattgt gttccctgtg ccactgctct atgttctgtc cttgtcatat tgtcattgaa
      121 ggctgattcc accctctgta attggagatg ttctactttt ggacaaaggt gtgggggcag
      181 ctcaggggaa cagcgctgac atttacttca tcaatttatt tttattgttc ctacatttat
      241 tgcagctata acagcccttt aatagttata tctcctccct gtagggtatt ctggtatttg
      301 aaattttttt aactcatttg ttctcataga taacagtaaa gtgcatttca cgctaacctt
      361 taggtttcaa tcttctctct ttcttcggct ccgaagcagt tgcagcttta aacttttact
      421 gcattgccag tctaaaggcc accaccactg agtccattct aacactggag taaccacaaa
      481 ttagtggtcc tgaaaatttc agggaggcaa gtcctaaacc ctgagtgccg ctattaccat
      541 aattcaaa
//
LOCUS       KCPA01003112             562 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 342603tic ultra-conserved element locus
            uce-5555, sequence.
ACCESSION   KCPA01003112
VERSION     KCPA01003112.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 562)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 562)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="342603tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>562
                     /note="ultra-conserved element locus uce-5555"
BASE COUNT          207 a           93 c           98 g          164 t
ORIGIN      
        1 ataaactatt ccacaaataa acatttgctc agtttccttc ttaggaaaat tacctttact
       61 gcttgcatag attttccaat acacaggtca atctgttcta accttttctg aaggaaaatg
      121 agaaatgttc cctatgaaca atgtaatatg taatgacact gtttgcaaac accaaatagc
      181 agcagactca aaaactgcaa tataaagcta tcaattaatt ttgttgtaac tgtatgcacc
      241 tgtgaacaac tgcttaatta aagaggcaaa cagaaatctc tcacaataat gtttcaaatt
      301 acttacattt atgtgactca attagttgga gtggataaat acaattggaa agctgccatg
      361 tggacttctg gaaataaaga aaagatagaa ctgaagagat aaatgggagg attcaggcag
      421 ataaatacag ataattcttc ataggactat ataaacagag gagatggttc tatgcaaaca
      481 aaatacctca tttactgtca cagagtctgc attcacagat gggaatatta aggggactgt
      541 ttgctttggt cagaatatgc ac
//
LOCUS       KCPA01003113             653 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 342714tic ultra-conserved element locus
            uce-1893, sequence.
ACCESSION   KCPA01003113
VERSION     KCPA01003113.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 653)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 653)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..653
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="342714tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>653
                     /note="ultra-conserved element locus uce-1893"
BASE COUNT          199 a          123 c          137 g          194 t
ORIGIN      
        1 attagcaggc tgcactctca gcagtgatgc aatatgccat taccctctgc tttaactgat
       61 ttattttaag tacaggaaga aaagtcacga ttggacacag aaggaaacaa ttgtttttgg
      121 cctgttgtgg cagagtttac acgtagaggt gccttctagt ctagttgctg aaggggaaac
      181 aagtacaaat atctatgcct cggctgttag ggtctgatta taagcactgt gctagagaat
      241 tcatggatta ttcatgtgta attacagata gctattgtgc tcttttaaat catccctata
      301 gcccattatg gcccataaca actgaaatag caattgtcat agtaaggttt gggctctgtc
      361 atagagtgta ggctctaatc aataatgatg aatggtaaaa tttagcatca agccggagaa
      421 agtctagttg cctcttgcca taaatctgtg caaatatcaa gttgcgcagc tgctgtatct
      481 ggaaatctaa aaggcaacac tctccctcca acgcatgcac ctctataaaa gttgaaaagg
      541 gagaaatgtg caatatgtcc attctaataa tccacatgct gttaagacac ttttctattt
      601 attcaaagca gggtgaaccc taggttgttt tcaaggtcaa ttccaggtga aag
//
LOCUS       KCPA01003114             729 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 342825tic ultra-conserved element locus
            uce-1526, sequence.
ACCESSION   KCPA01003114
VERSION     KCPA01003114.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 729)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 729)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..729
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="342825tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>729
                     /note="ultra-conserved element locus uce-1526"
BASE COUNT          233 a          115 c          121 g          260 t
ORIGIN      
        1 ggacgatatt tgtgtggtca ccctgagcat ttgtgcttcc aaaccaaact gttcatgcaa
       61 cagaccagaa tttaaatttt tctaatcctc tgcaagttat tctaatgccc ttgttatgaa
      121 ttctgtaata ttttttgcaa actcatataa gcaggtaatt gatgcaactg aaattcttgt
      181 cacatattta ttgcactatc agctttttta agtgacaaga agcaaaataa tcattaattt
      241 ttatagggca aggatctggc tttttgtttg acacaaagct gtataaaaaa ctgcttctga
      301 ttttatgcac attgttttta gttaatgatt ttcagctgtt tgttgttcct ctgatagcat
      361 gaaaatgtac catatgctca gccaaaagac aaatgattag caaatgaaat tctggacagc
      421 tgtctgactg aaagcgtttg gttgatagca ttctgctatc ataattagct taagctttgg
      481 gttaattaac tttctacctg gatatgcata ataatagcaa actgcaaaaa gcaggaagct
      541 ttcagtacat caacaacatt gctgtctttt ttatttggta tttcaagagc atattagaat
      601 ttcaagagtg attaatcctg ggaatattgt catctactgt agattttatt tgcaagccag
      661 ataatactga aacaattgga atctattata cagcagaaat agcattttaa aattgtaatt
      721 aaagtttct
//
LOCUS       KCPA01003115             586 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 342934tic ultra-conserved element locus
            uce-6346, sequence.
ACCESSION   KCPA01003115
VERSION     KCPA01003115.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 586)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 586)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..586
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="342934tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>586
                     /note="ultra-conserved element locus uce-6346"
BASE COUNT          171 a           99 c          113 g          203 t
ORIGIN      
        1 acccaatgtc aatcttcatc gaggaatttc tttgtttcag gaagaattta gaagagtacc
       61 tacctaaacc agtatttata aatctaattc cttgttctga taccctggag aaggttgtat
      121 tctagttcag cagtgcagct tcagcctagt catgaggaaa tggtgcttta tgagagcaga
      181 ttttagagga tcacattcaa aagtattgtt tgtgtaacat acatggttgt atccaatagt
      241 cttattcagt gctacaatct ttttgaacag ggaatggcca aatccagtgc tattgaaaca
      301 gccagaagaa tgcaatctta atttgcctgt atgggaccca agggttagtg tgttattttt
      361 tcccctctaa gtcacactgt acaataaatt cggttgctat tctaggtgaa cttcattttg
      421 ggtttattga acttaatgtt gtggtgtctt cataagtaac ctctaattct cctgagtata
      481 gaacaaattg accgcttgaa gcacacttgc ttttgcaata agtgatcgca tagtatatgt
      541 cttaaagtga tgcatttttg aaaattgcta aaaatagttt gcttat
//
LOCUS       KCPA01003116             501 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 343038tic ultra-conserved element locus
            uce-3016, sequence.
ACCESSION   KCPA01003116
VERSION     KCPA01003116.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 501)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 501)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="343038tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>501
                     /note="ultra-conserved element locus uce-3016"
BASE COUNT          144 a           84 c           92 g          181 t
ORIGIN      
        1 atctgtataa ataaatgtga ggtctaggtt agtagtgttt gtttttgcct gcatgtcata
       61 tgttattatg aaaaacatca accacagggc tgcattgcaa gaaaggcttc tgtgtaatca
      121 aattattgtt ttgtttaatt ttttttcaga atgttttcgt tgataaacca gcatttccag
      181 aatacaaagt ttcagatgca aaaaaatcca aattcatttt gctgcatttt agcactttta
      241 aagctggctg ggactggctt attttactgg caacgtttta tgttgctgtg actgtacctt
      301 acaatgtttc ctttattggc cacgatgagc tgtctacaac tcgaagcaca actgtcagtg
      361 acattgcagt ggaaattctc ttcatcatcg gtaagttatg ttttcatttg ggatcgacat
      421 ttaaggtcca cagaatgaat aatgtttaag aaaggaaata atcatccctt tcatgacttc
      481 atcaaattta gctctatggc t
//
LOCUS       KCPA01003117             578 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 343146tic ultra-conserved element locus
            uce-4988, sequence.
ACCESSION   KCPA01003117
VERSION     KCPA01003117.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 578)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 578)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="343146tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>578
                     /note="ultra-conserved element locus uce-4988"
BASE COUNT          161 a          113 c          107 g          197 t
ORIGIN      
        1 ttttataatt tgaggacaat ctggttcttc tctgaagtaa gatttttttt ccacaactcc
       61 tctcagctga taaaaactgc ctgttgtgtc cactgccata aagagttgtg catctagctc
      121 tccatcactg tacataaaag ctgcagatac ttctgtgtgt caagagacca ggaggatccc
      181 atgtcactgc aaatgaacca tgaatttcca gggttcacag gacaacgaga aagacaggat
      241 gagtcatgtg acttttgtgt tgcaccctga taaatggcag gtcaaggagg gttgtgttta
      301 atagtatatt cctcaatgaa atgtcacttt ttcctcaatg tgtcctctgt gtgagctaat
      361 taaaataatg ttttactgca atgtcagcac atgaagttgc tgactttctt gttgtcttct
      421 acatagtaca aaatgaatgt tgtcatttga taaattcagg atcttaaagg ttctgtctga
      481 tggagtctaa tatatgctgc tctatatatg tttaatactt ccaaactccc tctcttcctt
      541 tgttcaaatc acagcattca tgacctgtac ataatgtt
//
LOCUS       KCPA01003118             729 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 343257tic ultra-conserved element locus
            uce-42, sequence.
ACCESSION   KCPA01003118
VERSION     KCPA01003118.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 729)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 729)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..729
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="343257tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>729
                     /note="ultra-conserved element locus uce-42"
BASE COUNT          239 a          130 c          107 g          253 t
ORIGIN      
        1 gtgtgattgt ctgatctgtc tatgaggtcg cagctctttg atctttaaag aattaggtct
       61 gtttgaaagg gaaaactgaa cacttatatt gcttcacctt tgtctaagac atagctagaa
      121 aaaacaacaa atttatactt caaacaaaat atatcatcat aaactcattt ctctaaatga
      181 tttcacaact acattaacta cagaaatatg ccaaacaact gagaatcttg gtaatatttt
      241 agtctttgca tattttcact gactcactga aaacaaaagg agtttctgta actgtatgaa
      301 tgaaccatgg catgtgcatg ttcttttaag aaaggccaag ggtgcagttc tattttctta
      361 gctctgcttt catatttatg tgtctcattt ccagctcatt gctgatgcct tagttgcact
      421 atccatcaac acttttatcc tccttgttcc tcaaaaagaa cataaaatcc ttttttatgt
      481 cgtggtaata ttattgcaaa taaaagcaaa taccaaaatc tttattagtc tgccaaaata
      541 ataaactatt taataaaagc atgctgtaaa aataaggtca tttgcatcac tcaagtttct
      601 tgcagaaaat acagagaatt attggtcaaa aagtacaaac tgacagcaat tatttctgct
      661 gttgatctaa tgctgcctgg cactgaggtt tcacaagttt tctatcttta aatgtttgct
      721 tttaatgct
//
LOCUS       KCPA01003119             747 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 343367tic ultra-conserved element locus
            uce-4554, sequence.
ACCESSION   KCPA01003119
VERSION     KCPA01003119.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 747)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 747)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..747
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="343367tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>747
                     /note="ultra-conserved element locus uce-4554"
BASE COUNT          239 a          132 c          134 g          242 t
ORIGIN      
        1 caagcaatat ttcctgtaat aaacacccct aagtctaatg agaggcccta aggcaacttc
       61 aaatgtatga attcattata attgaacaac ataatctgca gggcaaagat tcctgctacc
      121 cagtctttta acttcgcacg gcttgggtgt tctatgaaaa atgttctaca ttttgtttac
      181 aatgtattgc tgctatttga agtattgtat gttcctgtag tacataagat ggggacgcat
      241 aatggaggaa aaatcaagga ggcaatcttt cattttgttc tggtatgaaa aattcaaaag
      301 actgaaaact cacccagaga aattttgcaa gcatattatt ttccgatgtt tcgatcaatt
      361 tgtctgtcaa ccatgctgag aggtggaagg ggccagcaaa agcaatttag cttgtgaggt
      421 ccaaaataga aatgttttag gaaaccttgt cacacattat ttttttatac gagaactgct
      481 gtgtttttta tttgctagtc atattatgaa gagaaattgg tatcaatcat ctaaatcacc
      541 tatgaatatc tgatataacc gttacttttg tgcatataaa taaggcaaaa aatatttaaa
      601 tgaagctttt aaagcatagc aaaacctttg ggtagacaac aggctcccca ctcaggtttt
      661 cccatttatc ctgtgcgttt taattgattg tacccaagtg acatcacagt gaatcatctt
      721 gcatatgaac atattgacct ctctctg
//
LOCUS       KCPA01003120             553 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 343473tic ultra-conserved element locus
            uce-4420, sequence.
ACCESSION   KCPA01003120
VERSION     KCPA01003120.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 553)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 553)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..553
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="343473tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>553
                     /note="ultra-conserved element locus uce-4420"
BASE COUNT          184 a          111 c           99 g          159 t
ORIGIN      
        1 tacatttatt agaccttaga gaaagatgaa aaaagagaca gaaaagaagt aaaacttcaa
       61 ttgcttactg atctagagtc caaattccag tttcttagaa cgcttttccc ttttaactaa
      121 agtgatgcag tccctattca tttgtatttc ccttcaagta acatgaaata gctttcagag
      181 tctatagaaa gtcagtgttt cacttaagta ttttaatgag caacaatgtc agtaataatc
      241 aaaatgatgt ttcacttaga ggaatagttt attcccaggt acttttgcag tgtactaaca
      301 taaccagaac aagaatgaca agaagaagtg ctgggctctg tgaagccctc aaaccaaatg
      361 tacctcccct attattgtat aaatgctaca caaaatgcag tcactgtgaa ggactcactt
      421 gatagccaac cctcaagacc cctagcttag ttcgttgaaa caattagagc atccataagc
      481 acactgtggc atgcacagag tgtctatggg ttagcagctg ctacagcagg tttcctcagg
      541 ctatcagctg tat
//
LOCUS       KCPA01003121             454 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 343583tic ultra-conserved element locus
            uce-3555, sequence.
ACCESSION   KCPA01003121
VERSION     KCPA01003121.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 454)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 454)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="343583tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>454
                     /note="ultra-conserved element locus uce-3555"
BASE COUNT          128 a          107 c          109 g          110 t
ORIGIN      
        1 ggggggaaag gcgacaggtc tacaggagga gggcagtctg cagtgctctc tctcatagat
       61 ctccagcggt gtctctgaaa caggagtagg aagcttagca aacagaactc cgggatccgc
      121 tccaaaacca catttaaagt caagtcactg gagtgggatt agtaatcaca atgctgcact
      181 ttattcacag gcagacaaag agcaatacca agggcatgac agcttaaata gccaaccctg
      241 acaggcagat gtaatgtaaa gaggctggct gtgcacctag aggtgaataa actcttgtgt
      301 actcctacat acttttcctg tttctgcact tattaagtca ctatttgtag ttcgacccct
      361 ggaaacgttt taggcatgcg gcatgtctga aaacatctgt ctcaaatctc ttggcacccc
      421 agccttaagt ggtcaaacct tgtgacgcag ctgc
//
LOCUS       KCPA01003122             493 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 343690tic ultra-conserved element locus
            uce-1850, sequence.
ACCESSION   KCPA01003122
VERSION     KCPA01003122.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 493)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 493)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="343690tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>493
                     /note="ultra-conserved element locus uce-1850"
BASE COUNT          148 a          102 c          108 g          135 t
ORIGIN      
        1 aacacccaga cctgtaaggc gtgaaacaaa cctctacaga gaggtaaaaa gggtgaatcc
       61 gtggcgagtc ccctcgcact tcacaaggaa tgagacctct gattaaacat gatacagcac
      121 tgtttactaa catttcaatt tctatgcctc atttattaga cttagaataa aaaggttaga
      181 ggggtgtttg ggattgtctt taaccttgat gatatttcca ctgaagcagc ataatggctc
      241 ttaattgctt aagtgaagag aacatgttga catgtccttc tttgtgctta aagctctgtg
      301 cctaaccatt atgctaattc aagcattata tacaccaaag tatttatggg actgacacaa
      361 gtgatgttgc aggtaaaggg ctgtgaaatg gtctgtaaac agagagaatt gattccgggc
      421 ccagagcaat gctgttaaag tcacagccat tgagccgcca gccccacggt ttccctgcag
      481 attgtcacac tgg
//
LOCUS       KCPA01003123             538 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 343798tic ultra-conserved element locus
            uce-2731, sequence.
ACCESSION   KCPA01003123
VERSION     KCPA01003123.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 538)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 538)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..538
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="343798tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>538
                     /note="ultra-conserved element locus uce-2731"
BASE COUNT          187 a           73 c           96 g          182 t
ORIGIN      
        1 tttccttttc atccttaatt tgattatgag ctattaccat gcccataaaa taagaaagtt
       61 gtacgggttt ctcaaatgct gattttactt tctgcacaaa tactttgtat cttttcagca
      121 taattattta gcagccattt cgggttaatt attgtcatta acaatatgag tcctgtgagg
      181 gaatatcaat taaaatgtgc acagctgaac tttcaaatga gtaaataatt tagtttttga
      241 aaatgactgg aaacagcagg gtaacagtca aaaggggaac aattatttta atgcttattt
      301 gacaaatgag taatttttac agcaaattag tttcttattg tagcacccct actggtaaca
      361 agagagaaac tgttttttaa aaataaaacc tgctaagata tgcatgcgaa gttaaggaaa
      421 tcatttgtat gaagaaaagg tgattatgat acacattgtt agctgaagaa tgttgccatg
      481 ggaatctaat tagggatata aatcacacga aattatgttt atatataggg ctggatac
//
LOCUS       KCPA01003124             470 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 343903tic ultra-conserved element locus
            uce-3870, sequence.
ACCESSION   KCPA01003124
VERSION     KCPA01003124.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 470)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 470)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="343903tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>470
                     /note="ultra-conserved element locus uce-3870"
BASE COUNT          151 a           74 c           83 g          162 t
ORIGIN      
        1 aatacaggat attgtatttg gacttgattc ataagcactg tctgtgtaca aactagtctg
       61 acatagctgc taaatacttt ggggtgaaca aaaccactca gcatatccct ttaaatacag
      121 atgctaatac atctgttcag tgcaagaaga aaagagttgt ttctgaagta aaattagaca
      181 atagagccaa tttcattttt tatgcatgtg aatgtagagt gcttgaggtt attagttgaa
      241 actgagtaac ctttccaggc tttcatctct ttcttttcaa atttgaatat gaaaagcata
      301 ttcaagtcag agaccatcac tttaatgaca tttggcagtc atttgattta ttagatttta
      361 gaaaaaaaat tccttttaaa tatttcatca ttctatgcta atcccagtaa tattgccagc
      421 tgaagccgtg tacctgtatt agtggagaca gaatggtgtg gaattttttc
//
LOCUS       KCPA01003125             611 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 344008tic ultra-conserved element locus
            uce-1743, sequence.
ACCESSION   KCPA01003125
VERSION     KCPA01003125.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 611)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 611)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..611
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="344008tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>611
                     /note="ultra-conserved element locus uce-1743"
BASE COUNT          186 a          134 c          106 g          185 t
ORIGIN      
        1 tttgttttgc tgcaatgcag agtgaagagc agccccgacc cccattgaat ccctgaaagg
       61 tggaagcagc agaggtaaag agaaggcaca gccaacctct ggtgaccaaa ggtgcgagct
      121 gttattttgt attccatact cttcaaagag caatataaac agaattattt atgcccagca
      181 aaatgttgct taattactta tgcaccactg tttgcttgta ttttaagctc tctctaccac
      241 ccacaggcag acgttaaaca gctgctaaaa gcgagcttta gtcttgcctg tttgaaatta
      301 gcatacttga gctttgaaaa aactttgttg ccaatttaca tatgcataga gactgatatt
      361 tagactcacc atatgatatg tccctcaaga gcttttctta ttgcctccat cctcaggtct
      421 caacctagag actgtaaatc tagcaggtga ttaattctat acccttgaga aactagcaat
      481 tagcacttgc aaccagtaaa aaattgtcat ttcaaacccc tgtttactat gcccatgtat
      541 tttctatgaa ctcacagtta actaaataga tggcaataga tttgcagtca ctcctgtctc
      601 tttatataaa a
//
LOCUS       KCPA01003126             610 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 344119tic ultra-conserved element locus
            uce-7423, sequence.
ACCESSION   KCPA01003126
VERSION     KCPA01003126.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 610)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 610)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..610
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="344119tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>610
                     /note="ultra-conserved element locus uce-7423"
BASE COUNT          196 a          120 c          106 g          188 t
ORIGIN      
        1 gtgtaagcct ggtgcactaa ttgtgaatca ttttgagaag ctgctcattg acagcttcat
       61 gctgggaagt ctaaattact ctgtcccact tttctcagag ggagagaatc atttgtgtag
      121 gtctttctac agcttgaatc ccagcctcca caaaacaaga tgtgctaagt aaagcagcat
      181 ttaggagcct aatgaatgtg catatacaag tatgaagaca cacttgtaag ctggtgctgg
      241 taaggaagag tacattattc aatgtatcct ctttgaaaaa aaatcaataa aattcatata
      301 cagtatgctc attgtaaaac tacatgtgct gcatttaata ctcactgacg tgacacttaa
      361 caaacagtct tgaactgaga tctatttgca tttgatttct gtcacagctt gacaaaaaag
      421 tctgttgctt tcatctgctt tttcttttta acacttctaa ccaaagatgc ataggtgtac
      481 cttgcaggca gaataaaaag caaagtgccc tctaaagggg tctcaaaccc ttttcctaca
      541 tgtttataat ataccccaat gttcaatcac tttctcagcc cagcagaaat aataaagaat
      601 attgaatatt
//
LOCUS       KCPA01003127             634 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 344231tic ultra-conserved element locus
            uce-7296, sequence.
ACCESSION   KCPA01003127
VERSION     KCPA01003127.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 634)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 634)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="344231tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>634
                     /note="ultra-conserved element locus uce-7296"
BASE COUNT          199 a          132 c          126 g          177 t
ORIGIN      
        1 gaaaaactta tgtatgtaga ctcctctcac aagagcttca gggcataacc cagacagaga
       61 agccatcact tttccattct gtacccaggc tgctgacaaa agaattgtgc aaatgagcct
      121 ttaaatcctt aaatagtcac tacacaatgc atgaaagaat gcagcgcggg acaaagggca
      181 atattcacag tttatctcag ggtgatggat ctgaatcgac gcatgaacat gggtttgtta
      241 cgggatggag taggccgaaa acccctactg agaacccagt ggccacagtc tgtaatgcaa
      301 acagtcaggc taagtccttc acaattaggg taaatggaac tggccattat atgaacttca
      361 acttgttctc atgattgata tgggaaatga aaagttgtag gtatctctac aaagactttg
      421 agttttcttc tcctgaccaa tgctaggaat tcgagaaatt cctattctat gtttctattt
      481 aataaaagta cttgcacttt catccacact gcaatggatg ttaccagttt tgttgttttt
      541 ctaaaatttt agctatagat gggacaaagt ccatggaaca aagactgtgc aatctatact
      601 gactgataac ctgacatcct tcacaccagc agcc
//
LOCUS       KCPA01003128             504 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 344341tic ultra-conserved element locus
            uce-7303, sequence.
ACCESSION   KCPA01003128
VERSION     KCPA01003128.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 504)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 504)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="344341tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>504
                     /note="ultra-conserved element locus uce-7303"
BASE COUNT          132 a           95 c          115 g          162 t
ORIGIN      
        1 tgataaggaa aagcataaaa cttcttacca aaagaatgtt tacaccttca gaaaaggtaa
       61 gggccctgtg gagggacaga gcttcagctc cagctcattt tgttcaggga tgcttttccc
      121 cctctcttta aaaaaaaagt cattttatgc acaaggagct tatttcttaa acaaacactc
      181 gtgtttttga tttacaccac gggctgctcc taaataattt atggcgggtt aaatttattg
      241 cacagccctg gccggctgca aattcgaatt gccaaataat tagattttag ggcaatgctt
      301 ataaattatc cgccgatttg tccggacttg tttgtcagtt gctttgtgct tcgggtcatc
      361 tttggcattt cgctgtttgt gttttaattg ctgatttaca ctttgacaga tgagagttga
      421 tgcctccaag atcggggaga gggtgtgggg gcgttgaaga gcagaagagc ttttagagcc
      481 ttgtgatttt ctccaaggca atta
//
LOCUS       KCPA01003129             690 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 344454tic ultra-conserved element locus
            uce-7941, sequence.
ACCESSION   KCPA01003129
VERSION     KCPA01003129.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 690)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 690)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..690
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="344454tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>690
                     /note="ultra-conserved element locus uce-7941"
BASE COUNT          206 a          132 c          122 g          230 t
ORIGIN      
        1 tttttattta agccaattca taatgttttt cttgcatttt ctcatgacac tgcattccga
       61 cttggttttg aaagccttaa aattatgtgt gtgtaagagc ttaattttat ggattatatg
      121 gtattcttca ctatgaagtt ttaaaagata caaaagaaaa accttgctca aatgtagaag
      181 ttatttttgc agtaacgtat gtcatgattt ttaaacattc aggcctttaa actttttttt
      241 tatagtgtat gttcttgcca atcccagcac agttctacaa agtaaaatat ttggcagtga
      301 attcatatta acagatggaa caagaaatta acacgttttt gcttcgctaa ttcacagttc
      361 ttttaatacg ctaattctaa atcacctgtt ctgactttga caggctacag acacctgttt
      421 ggggtaatat tccacagcta attattacat gagaaactca gtttccaaca aaagggtttc
      481 tgtgtgaaat tgtcatagtt agcaaattag taataccgac tttatacaaa aatagcttgc
      541 agaatttaca tgtgcttaac cttgcctgca gaactgggag cagtggggtg cagggggccc
      601 cagcacacca gagtcggtgc ctccatccct caccctccag agctggaaaa ttctaattcc
      661 tggtcctcgc agctgagtca cggataccaa
//
LOCUS       KCPA01003130             395 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 344563tic ultra-conserved element locus
            uce-2046, sequence.
ACCESSION   KCPA01003130
VERSION     KCPA01003130.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 395)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 395)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="344563tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>395
                     /note="ultra-conserved element locus uce-2046"
BASE COUNT          133 a           68 c           93 g          101 t
ORIGIN      
        1 atacagaaat tacttttcat gcactttcga gaggaaggga aaggaaagag gtcataggta
       61 tctggcagta cagggtgctg ctatagagca tgtttatggc atttcacaga gaagagcacc
      121 agaagggaag agggaaaagc agagtgtcag atataagaag aagtgatcac aagcacaaag
      181 gaatttatat tcaaatattt aagcattctt gaaaggatgc tcggagcaga aattcctttt
      241 ctctgctccc catgtagaaa tgactttaac actcagccag atgctaatgc aaagtgactc
      301 aagctattcc tcgcaagcat agctaaattg ccgttatttg ttaagcgcat tgaattcagc
      361 tgtggataca gcagttggtt acattcagaa ggcat
//
LOCUS       KCPA01003131             455 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 344671tic ultra-conserved element locus
            uce-207, sequence.
ACCESSION   KCPA01003131
VERSION     KCPA01003131.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 455)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 455)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="344671tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>455
                     /note="ultra-conserved element locus uce-207"
BASE COUNT          143 a           88 c           93 g          131 t
ORIGIN      
        1 aaaaatcagc agaagcattc tagagcaaaa acttcactgg tgactccatt tactagtacc
       61 actttcattt tgtgaaacca ggagatttac aaggacaaga taagaggact ggcagatgtt
      121 ctttgactca ttcatttgag gggaagggca ttcggaaatg gcattggtac agaatgacat
      181 ttgaaataat gggctgtgat tctgttggca cttttagtgt taagcaagtg atctgcaagg
      241 taaagtggat tcacagttag agtcagcacc agtgcacagg tcgcctgtaa aaatagaaga
      301 ttccattatt cttcaggctc cccagaggga gcaaggtctc cagcatcatt accaggacta
      361 aatctgactt ttctacctcc cctaatttcc tcctagtaat tataggtcaa gcactctttt
      421 gtaaaatata aaacctttgt tcttatcaaa aatga
//
LOCUS       KCPA01003132             892 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 344785tic ultra-conserved element locus
            uce-1747, sequence.
ACCESSION   KCPA01003132
VERSION     KCPA01003132.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 892)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 892)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..892
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="344785tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>892
                     /note="ultra-conserved element locus uce-1747"
BASE COUNT          275 a          172 c          182 g          263 t
ORIGIN      
        1 tgaaggagga acaacactag ccagagctgt aactaaaata tgcttgttta accatgtact
       61 aatcattcct ttcaaaaggc attaaaaagg acaaaagggt aaaatgtcca gaaattaagt
      121 tatatgacag actgggccgt agtttctcag aactttaatc tgtactgcta gtcagagatg
      181 tcggcctcag tattttcttg cagtgttgtt tttgattgaa aactttgtga atgtttgtga
      241 tattgctgag agcctattgg cagatgagca tctcttgcta tagtctccat cattatttgc
      301 ctgtcttgtc tattaacgag cactatcatc ccatcgtaag atgacagctg caacacgtac
      361 tcaggcgcaa taaacagcta aatgaggcgc acagcaattt cacttgtcac cagagccctc
      421 ggcacgactg gctgcacagc ttgatgcata aattcatgag gctgttgcat atgatggagt
      481 atgcctggct gaaagaggtg atggatagca gggcagctaa aaatggccat caccttgact
      541 ctgtcaggac attttttaaa agtaccccat cagctctctt gcattctttt atgtacacta
      601 tccccaagct ataggctttc gaaagtactg atacttactg atggtttttg gatctaaagt
      661 caagtttctt cttaggttca gtgaatgcag tatatgctat taatgtgtag ggtgaaatgg
      721 tcctctaata attgttcatt caacacacag tggagtcata aggttaaaca ctagcaacag
      781 aatcagagta tgtctaaaat gctggtaaaa tgcatacatg cacacagaga catatatgac
      841 agaaaaattt atgaagcctc gtgcaaaagt tcattcaatt acaaacatgc at
//
LOCUS       KCPA01003133             693 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 344895tic ultra-conserved element locus
            uce-1892, sequence.
ACCESSION   KCPA01003133
VERSION     KCPA01003133.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 693)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 693)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="344895tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>693
                     /note="ultra-conserved element locus uce-1892"
BASE COUNT          224 a          101 c          130 g          238 t
ORIGIN      
        1 tataaattcc aggcaaaagt tttgaagtac tatgtgagct tctaagaaat attttacacc
       61 attttattat tcagttaaaa cacagctttt taaaatataa aaaggaattt atatgttata
      121 tgatttacag tcttgggaaa aataacatag tcataactct gcagtttttg tgatgcatga
      181 agatcagatt ttttaatgtt ggttaatgct ttactaatta aagtgtgcat gttaattaaa
      241 gcagaggcta atgttaatta cctatattaa tggaatctca tgtagcacct gcctgaagca
      301 atgggttcaa ttttcaaaat atctcaatta agactgaaac ttttgatttg catctagtag
      361 ggtttcaatt aactgcattg caaacttaaa taacacactt aaagggataa tatcaccaat
      421 cacatgcagc acagtggaat tggtcggttc aattattgac tacggctgtg agagctttca
      481 cagtcagtag gtaagtacta tggtattggc aagtgattat tgtctaggac tgtcatcact
      541 tctgtggctg ttgtaagaga gatgttaaat tgctgtactt gggtctcact gcaattccat
      601 tgttgaggga gacagaaata gaatgatgtt ttctcacatc cagcatttaa tggtgaagat
      661 tcagcttgtt cctttgaaat aaatgaccac tgt
//
LOCUS       KCPA01003134             549 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 345000tic ultra-conserved element locus
            uce-5774, sequence.
ACCESSION   KCPA01003134
VERSION     KCPA01003134.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 549)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 549)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="345000tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>549
                     /note="ultra-conserved element locus uce-5774"
BASE COUNT          164 a          109 c          112 g          164 t
ORIGIN      
        1 ctgtatgaaa atgagctgct ctgttgtatg aaatgagcta acaccaagct cccttctcat
       61 tcacttcaag agcaatgatc catgtcaatt tggatatctg agccatagca cttttggttt
      121 tattgtactg aaattactta aaacccactg actcagcatt ttcagcacat gtcacatctg
      181 attgtttttt tgcttttcaa ttaggtttac aaggccagaa catctaggaa gcagtgccaa
      241 aatcaaatgt agtggttgcc atagctacca agaatctacc aaacaactca ctatgaagaa
      301 gttacccatt gtggcctgtt ttcatctcaa agtaagttca caggggacca acagagcaga
      361 ggatgtgatt gagaggatga gctgaattct tggacatgtc ttctggcttt cactgtaaac
      421 ttttattaat atgaagttgc ccagctagaa ttaagataga ttatctctga tgtagttttg
      481 cagtgtgtct gggggagagc ttgaatctag agacagggct tgtccaaaac ctgaaccagc
      541 acagaaacc
//
LOCUS       KCPA01003135             401 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 345105tic ultra-conserved element locus
            uce-3003, sequence.
ACCESSION   KCPA01003135
VERSION     KCPA01003135.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 401)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 401)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="345105tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>401
                     /note="ultra-conserved element locus uce-3003"
BASE COUNT          129 a           77 c           63 g          132 t
ORIGIN      
        1 ttttcacaat tcaaagtcac aaattacgct ttgcttttaa caagtaaaca agtgtacaaa
       61 ttaattcaga gagcagtaat tttgaaaatt ttctatgttt aatgtgcact gcagttaaac
      121 tactttttct gtacaaatta atttactgca tcagtgatcg atgtttatgt ttaggcagtt
      181 ttatttctca gtatggtaaa attagaccta atagttgcaa cctgttatgt ccaatctgtc
      241 actgaaattc aaattgccct ttttcctatt attcaaggag taatttggag gaattaaagc
      301 catctaaaac cagaagacaa acaattctca gtaaggactc aatagcctgt gtcatcaacc
      361 tgctctagaa agcagcggcc cttcctcggc agaaccactg c
//
LOCUS       KCPA01003136             664 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 345212tic ultra-conserved element locus
            uce-2595, sequence.
ACCESSION   KCPA01003136
VERSION     KCPA01003136.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 664)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 664)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..664
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="345212tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>664
                     /note="ultra-conserved element locus uce-2595"
BASE COUNT          210 a          149 c          144 g          161 t
ORIGIN      
        1 caaccactgc ttttcttgtt cccagaaatt ttagcattag aagtatagca agcagtactg
       61 ggagttttcc aagaatgaat tttgttctca gaggatggca agcagaaagc agcacgacaa
      121 attttgcatt cacataaata gacataggat tgcaacagat ggggtttgtt taggtttggt
      181 taacagcacg aggaagggtt ctcaactaaa ctgcattaga tgatccatca gcaagagggt
      241 tcactcgaaa ggactgaaag ggtcccattc atttacagct acagccatcc aagttaaagc
      301 ctctctcgcc tgacagcagc aagtggcaaa cttagggaag caatgggtca tgggaaaggt
      361 cccattagat cagtgggagc acacactaaa caaatacagt cacatggatg cacacattta
      421 aatactgccc aagggaatat gtggacatat gttcagtgta gcctctaggc ctcaagaaag
      481 ctatgtttaa aaaaaagaat tccatcaatc agtccctagg ccttgtgaag tatgaagttg
      541 aaaactgcaa aggagacatg tgctcagctc tctccaccag ctgccccatt aagcagcact
      601 gctctgcagt actgccctgg agaccctgca acttcaattc cagtctccct ttaagcccag
      661 ataa
//
LOCUS       KCPA01003137             356 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 345312tic ultra-conserved element locus
            uce-4445, sequence.
ACCESSION   KCPA01003137
VERSION     KCPA01003137.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 356)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 356)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="345312tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>356
                     /note="ultra-conserved element locus uce-4445"
BASE COUNT          110 a           53 c           75 g          118 t
ORIGIN      
        1 tgtgtaaaga gcactttatg actcttggac aattcaaatt ctagtgttta cttgtgattg
       61 tttattttac atataataga gtggctggat gatgaagtat attagttctt taataattta
      121 tagaaatgct ttgatgttgc agtaattaca ttaaaggtca catatcaaag gtaatttggt
      181 tgagcagctg tgatggtttc tcagaagcaa tcaatattgc tgtccatggc gctgatttca
      241 ccaaggggac tgccagatta aaggaggctt attaccagac agacagacac gggggaaatc
      301 aagaacagat tggagagatg cactattctt tttcctcacc tataattaac actgtt
//
LOCUS       KCPA01003138             708 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 345423tic ultra-conserved element locus
            uce-5290, sequence.
ACCESSION   KCPA01003138
VERSION     KCPA01003138.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 708)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 708)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..708
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="345423tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>708
                     /note="ultra-conserved element locus uce-5290"
BASE COUNT          227 a          150 c          140 g          191 t
ORIGIN      
        1 aatcaaggta agagctatat gtacaaaaca aatggagtct tcctcacctt tggcatgaga
       61 aaacgaaagg gatttcagca ggattgtctt taatccaatt tactttggat ttaatctcca
      121 aaacaaggct ggcctgctaa ttcccaatta taatggcaca tgtaatcaga gtcctcaata
      181 acaaagactg actatattgt ctattaggaa tggaaatctg aaatgcaaat tcagcaaatc
      241 aaaacgttaa atgagctcta cccagagctc ctgccagggc agcgcatgct ggctgacacc
      301 tgccctgaat tctccctcca gctgaatgtt tcattctgtt ccagtctttg cctcctaatt
      361 gacctgctta tgatctctgc tacaattaac atatgcttat tagtaatggc tggttaaaga
      421 tttcaaactg ccgcagttta caaagtctaa tagagatggc acaccacagg aaagatgaga
      481 ccactgtttc cctcatcatc agtgtcatag tggtttggtt tcatgtgatt caaatgagat
      541 aatttttcac gtcatctgat gtctgcaaac ccgttctaat tgaaactgga aatctgcaca
      601 caaagtggct taaagctcct ggtgcactaa atgaaaagca gttaggaata ggaccctgta
      661 accacactag cagcgatggg gaaaaaagaa ggggacaagg aaaccaag
//
LOCUS       KCPA01003139             587 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 345533tic ultra-conserved element locus
            uce-6628, sequence.
ACCESSION   KCPA01003139
VERSION     KCPA01003139.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 587)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 587)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..587
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="345533tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>587
                     /note="ultra-conserved element locus uce-6628"
BASE COUNT          228 a          104 c           89 g          166 t
ORIGIN      
        1 cttgaaattc ttggttggac ataaaacaga agtcaaaaga gaaacacaaa ccatgatcaa
       61 ttagaccaac cactagaaag aacagtagcc acattgatat aattccactt tgatttaggg
      121 tgctatcaaa agtttcaaca gactatagct ccagacttta tctttcttgg aagacactca
      181 aatagaagcc acagtagaga ctgccttgtc acaagaggta caaatactga tggagaaata
      241 aaaggacaaa tctagttgtc taaaagacaa ttcactgtac acattttatt tacagttttg
      301 tacactgtct tagtatgaat gggaccgctt ttctacttga gccattttaa ccaaagcaaa
      361 ataacctaag taatacaaag tgttaaaata cagcataaga tacctagtaa ggaatgtaaa
      421 ttatggtgtt acatttttat gttcaggaaa tcacacaaaa agatcactga tttgactgaa
      481 atgcataaat ccatagcaaa gctttgatgt tacaaaaaaa ccaaaaaatt accaaagaat
      541 gcacaaaatt catgtttatt ccacctttgt catattccca gattttt
//
LOCUS       KCPA01003140             385 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 345640tic ultra-conserved element locus
            uce-3680, sequence.
ACCESSION   KCPA01003140
VERSION     KCPA01003140.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 385)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 385)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="345640tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>385
                     /note="ultra-conserved element locus uce-3680"
BASE COUNT           93 a          107 c           81 g          104 t
ORIGIN      
        1 ttttattcag ttgatcctct gaattccttg tgctcgttct cactccttcc ctggaactgt
       61 accccttgct cacaagtggt caacagccag gcagctgtgt cttgtctctg ttaggagcca
      121 gggagattct ccttgacctg aaaagcagca gcagctccct gtgctcagct cggctgtgcg
      181 gacgccaagt gcgccagcca gctttgcatg tcctaactac tgtgtgatgc ttccttttat
      241 aatcagtccg agcatcactg cttctcccaa ttgccccctg cacttaattg accaatagag
      301 ctagacatat ggaggatcga atcacaaacc caaatcagca gttgtcagag gagattaatt
      361 caaacaggaa gctacaaaac acttg
//
LOCUS       KCPA01003141             305 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 345745tic ultra-conserved element locus
            uce-4741, sequence.
ACCESSION   KCPA01003141
VERSION     KCPA01003141.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 305)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 305)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="345745tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>305
                     /note="ultra-conserved element locus uce-4741"
BASE COUNT          108 a           49 c           48 g          100 t
ORIGIN      
        1 cttctaaaat acttatttgc atttcagatt ggaaatcatt ttaaaaacca ctgcaaacaa
       61 agtagcctga aaatagtact gacatttgcc catagtttcc atctgattaa gtggaagtga
      121 cacgagtaga ttagaatgag actaagacaa ttcacattgc aattgtgtta gtttaacttt
      181 aacaatcttt taacatgctt gtttaaatgt ggctgacata ccataattac aaatctacaa
      241 gccttgatta tagaatttta catcatgaac ctatggggaa agtatattga gtgaagcaat
      301 tcctt
//
LOCUS       KCPA01003142             726 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 345859tic ultra-conserved element locus
            uce-608, sequence.
ACCESSION   KCPA01003142
VERSION     KCPA01003142.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 726)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 726)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..726
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="345859tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>726
                     /note="ultra-conserved element locus uce-608"
BASE COUNT          212 a          123 c          160 g          231 t
ORIGIN      
        1 tttaagtctt catcatgctg cagagaataa tgcatctcag acgttttgct tctctgtgtt
       61 atttttacac aaatcaacca gagtttattt attcccttta agtgccttat ccggcatgtg
      121 catccctttg ctattggatg attttgaatt agctttacaa agattacatg gatagacaca
      181 gcattgtggt agttaataga aacctgtgca gtgaggtctg tgggctgcaa gatcactaac
      241 agtgccaatg acagtgaagt atggccttat cgaaaggaga attcataaga ggctgccctg
      301 ggacactgca ccactgtcct tctgtgtatc ctgacaatgt tatctgtcct ctcagtacgg
      361 agtatcaaat gtctgtcacg agtacagaaa ttaatttaat gtcacctgaa gacatgcaat
      421 taatctttta gaggttttca taataccttt acagaaagag ttgccagttt ggcggatttg
      481 gattttgggg tttagcagaa gataaggaaa attaattttt catcagggtt aatacaagct
      541 agcagggcca caaaggctga gaaaaatggt ttgggaattt gtcaagtgtt gtcactctag
      601 aataatgctg cttaacgtct gataggtgta atcaagagtt gagatttcta tagaagggga
      661 ttaatcaatt tactcactac agaatgcaag ttggtgatac cattccttca tggggtttag
      721 gaatga
//
LOCUS       KCPA01003143             626 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 345968tic ultra-conserved element locus
            uce-1346, sequence.
ACCESSION   KCPA01003143
VERSION     KCPA01003143.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 626)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 626)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..626
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="345968tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>626
                     /note="ultra-conserved element locus uce-1346"
BASE COUNT          166 a          141 c          147 g          172 t
ORIGIN      
        1 cggctcccct ggcttgtctg gcaatcatgt tcgtgattat atgggtaatg aaacacgtgc
       61 tctttttgtc tgtggctctg attaatctgc tttctattta gccgtgattt atggtgctca
      121 actgttgagg tgagcgccgg cccatcagtt ccgtggccta ttacgggcgc cgcggcggcg
      181 aaatgcctgc gaggcttgaa ctgtttcttg acagccaggc ttcccgctac attccctcca
      241 atctgttttg cttcctggtg tgacctttca tacagtaaaa tacattagtt gaatagcaca
      301 gtctcattaa aagagtgaat taaccgaaga gtctttttaa ctaaatgaca gccaaaggac
      361 tgagtgctaa tagccacggg cagttagaaa cttaactcat gaatcaggct gttaatactg
      421 ctcgctgcct gaagcgctaa gggcaccaca ctctctgctt gctctcataa gaagaaaagc
      481 tcattacttt cctcctgatg ggagagaaag agtgagcgag caataataaa gcttgaattt
      541 ttcaatactg ttaaaaatgg ggctgacaga ttgccgacaa taggagcaac gggctagaca
      601 ctgcaaagag agccactgaa ttagca
//
LOCUS       KCPA01003144             674 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 346078tic ultra-conserved element locus
            uce-7949, sequence.
ACCESSION   KCPA01003144
VERSION     KCPA01003144.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 674)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 674)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="346078tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>674
                     /note="ultra-conserved element locus uce-7949"
BASE COUNT          189 a          114 c          111 g          260 t
ORIGIN      
        1 gtcagtttta aaccaaagcc cacagaaaaa atgaaatatt ttccattatt agattccctg
       61 acatttttat tagaggtatg ctgcaatgat attcagattt attttgctat tattgcaggg
      121 agaaaaaaac ccagaactat gctccatatt atgcataatg tagaaaattg ccaagctttt
      181 ataaaatatg tttatcattt cttaatgtga tttatttgcc ttgtgtttag actattgcat
      241 ggtaaagttt attttgtgca tatacttttt attttactaa tatattacaa gccatatctc
      301 aatgacccct gtacattttt catgctgtct tactcccaat ggcctctgtg catgtaagta
      361 acctgtcaag tgacaatgcc tctttatttg cttcttactg tttcctttca agaagtcctt
      421 ttctttatta gctagtaaca cagaagcatt gaagttcagt cgtgtgccct gtattcctcc
      481 tatcttaatc atttttcttt tgcatttgag aacattagtt aaatccatgt agactgagac
      541 acatcttctc tttgtgatga agggtatgtg tcatttctga tgtttgttcc tgttgtttgt
      601 atctaacata atgtggtttt gttcaagaag aaaaaaaaga cacttgcagg cttaggtggt
      661 tagcgtggta aagc
//
LOCUS       KCPA01003145             460 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 346188tic ultra-conserved element locus
            uce-6249, sequence.
ACCESSION   KCPA01003145
VERSION     KCPA01003145.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 460)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 460)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..460
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="346188tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>460
                     /note="ultra-conserved element locus uce-6249"
BASE COUNT          130 a          102 c           89 g          139 t
ORIGIN      
        1 tttttccccc ttccctttca ttcataaacc tggtggctat agacgcagct tgaatattga
       61 cgtctcttcc cccaactgct cctccgttaa cccaattaca gaattcatca agaactgtgt
      121 tgaattatct ctttccatac agtatcagca ttagcctaat taaaagctat aatgtctgat
      181 ataatgatta aatcgttagc tctgctgtag ggaagcaata ttttgttttc ccttcaatta
      241 gaagctgatt gaggttttca gagcaggtca gctgtgaaat ttgaattata tgtgtgagta
      301 ccgttcacag ggtgagcccc tactcgaaag ctccagagat tctccatacg cttttaccca
      361 gcaagctgag aaaagacaac aaaacacaga gagagcctgt agctgatttg ggactgaggc
      421 tgtaagatgg cacagaacag ttgtttttat tcaggcaccc
//
LOCUS       KCPA01003146             632 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 346301tic ultra-conserved element locus
            uce-5924, sequence.
ACCESSION   KCPA01003146
VERSION     KCPA01003146.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 632)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 632)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..632
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="346301tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>632
                     /note="ultra-conserved element locus uce-5924"
BASE COUNT          196 a          145 c          120 g          171 t
ORIGIN      
        1 acagtgccag aaggccttta cagcagcatt tcaagcactt ctatgcttcc actactgttg
       61 aagtcaaggt aagtaaagct gcagggctca aaagaaaaga gaaaccaact cttccttcaa
      121 ctacatctgc cataacactc tgcacatact gtaagagaag cgtgcaaacg gtttctgtca
      181 tctactgtgt ctttggtaaa ggtttgggaa tagcacttgt ccctgtagac cttacctcat
      241 attatgatca tctactttat tgtgtaacgg atcttttagt tacctccccg cccatccatg
      301 tacacagaag ggccatgtac atggcgaagc tagagactgt aacctgaaga ttggggacaa
      361 attaaagaaa aaaatgtgat tcaacagaat tacattaagt cagggaataa ttggagtcaa
      421 gctgtacctg attgcttcca ggattaactt cagcagagta ttatacatta ctgaacttta
      481 ccagttaacc tagtcctcct accccccact ggtggaacct catctacaat cgttaatatt
      541 aagcaaatga tgcttcaaat aagtatcaaa gtctcacctt cagacgacca ctggtctttc
      601 ggcacttctg caaccagaca gtggtagaaa gg
//
LOCUS       KCPA01003147             558 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 346406tic ultra-conserved element locus
            uce-4049, sequence.
ACCESSION   KCPA01003147
VERSION     KCPA01003147.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 558)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 558)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="346406tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>558
                     /note="ultra-conserved element locus uce-4049"
BASE COUNT          171 a          114 c          119 g          154 t
ORIGIN      
        1 tttaaaaaca tcacactgaa caccccaaac agtcacagcc tacactctcc cagcatttaa
       61 tcagcagtcc ttttagctga tagagtccta agtgatactt aaggccattc tagatctgct
      121 cgctaagtgg gcctagcagt accagcgtat tttatgttcg caagtcatga tagaaaagtg
      181 cttgaagttc agggggcatt tgtctccttt ctcgcaaatt catttaagta ccagtcttgc
      241 catagcttta actggggcag acaaccatac aaatgacttg agataaaatg aaaataatgg
      301 actgagctag gtgccggggg tggtagttac actgcatgca catcaataag cattgagtgt
      361 tattctatgc taatgtaagc ctgatggatc agctttcgct tttagcctgg aggaccatta
      421 agcactagaa gctgggtcaa actgatatag tgaggcagac gtaccctaac agttggcaac
      481 agtagttaac aagcagtaat ttgctatctg tgagactaat gttgtttaaa atcttcatga
      541 tcagaacaaa gatcagag
//
LOCUS       KCPA01003148             956 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 346521tic ultra-conserved element locus
            uce-2114, sequence.
ACCESSION   KCPA01003148
VERSION     KCPA01003148.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 956)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 956)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..956
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="346521tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>956
                     /note="ultra-conserved element locus uce-2114"
BASE COUNT          294 a          181 c          179 g          302 t
ORIGIN      
        1 gccaaagact gtctcagttt acgaattagc atttaaaact actgtaggtt atctaacaag
       61 cattcagatt caatagtact tttgacagca gtaagtaaag agccttttaa catcttgaac
      121 acatgtgctt gaaaaaagta gttgcatcaa agcagttcaa agactgcaga caaaaaccag
      181 ttaaaatcca gtttgctgtg agatgatttt agtgtggtgt aaacaacctt tcacaactcc
      241 ccatgggaaa cgttgtaaga ctatgttcaa aatgaatcag gcatatttat aaagatcatg
      301 aagtggtcaa atgcatttgc atttttggca gatccactcc atgggtacta cttgctacag
      361 tctgtagaaa tctcaaatct cacatcagcg ttgcctatag tgctttatta tttgttacat
      421 gttatgctaa gtacctgaga aaggggacat tccttggcca atgaactctg gttcatatcc
      481 ttcagtaagt ccttcagagc atttcttact gttgtgtgag accattgttc aggaggcaag
      541 tcttctagtt tagggcaact atttgaaaca cagattagaa aagggattat tacaagattg
      601 catcctgctg cagaacattc ctttaagaca gacagatttc attttgcgca tcaagcagat
      661 gcatctggag attgctctcg gtctcctgat tgttccgatt agttaattac tttatacaac
      721 acatctgctg tattgatgca tgaattatac atcagctgca tgtggcgact attttttcat
      781 gttacttcta ccttcctgct ctgatgcgct tggtaaaaca atttaaggtg taatgctttc
      841 tcacgactga tcatgaaaag cattaatata ttaacttgtt gccgtgaaat ttaagaacct
      901 agacagcaac aataagcgtg agcaagtcat tcttttacaa aatgcacaca gatggt
//
LOCUS       KCPA01003149             611 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 346631tic ultra-conserved element locus
            uce-6191, sequence.
ACCESSION   KCPA01003149
VERSION     KCPA01003149.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 611)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 611)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..611
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="346631tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>611
                     /note="ultra-conserved element locus uce-6191"
BASE COUNT          169 a          127 c          142 g          173 t
ORIGIN      
        1 ctttaatttg aagtggacag ttcatttatg caatatctgg cttcagataa tgaaaggcac
       61 ctgcaaaaaa gcaaaagaag ctttttaagt catgctgtga caacctcaca gcatggggcc
      121 atgccaacta caggttgaca atgtcatatt taatactgat atatcaaagg aaagggacta
      181 atatttttat tcctaggaca agtttgacaa aactctatgt atctgggatt atatactgta
      241 atgattcttg agctgacctc attaagaaca tgtgtttcta atagcggaat gccagcggtt
      301 atttcatttt ggacaaccct tatgttttac ctaatggcaa tcaggtttca tgtctcaaca
      361 attaataaca tcaagatgtt gttgacatcg cttaagaaaa taattatgca gcagaaatcc
      421 cgctcgaacg atcagctatc tctttgagga ggagtggcag tgagccccca ggatctctct
      481 cggggctccc tccctcgcca gggtactcac tttggccgta ctggccgtac tggtagcccg
      541 tgacggggtc catgctgtat cccgaggtgc tgtaggtcgg cgggcagtag gactgggatg
      601 taggcaggct g
//
LOCUS       KCPA01003150             776 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 346738tic ultra-conserved element locus
            uce-2164, sequence.
ACCESSION   KCPA01003150
VERSION     KCPA01003150.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 776)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 776)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..776
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="346738tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>776
                     /note="ultra-conserved element locus uce-2164"
BASE COUNT          211 a          170 c          195 g          200 t
ORIGIN      
        1 agtgtgcttc attagctaat tttggctttg gacctcccac gatgcccagg gtcaggtaac
       61 aagagttagt gtcagctgtg ggtcagggat gtcacgatgg tatatcatta aaatgtgatg
      121 ctgccaaaaa ctgcccaaac tctgctgtcc ttagaaaagg agcccttgga cttagggttg
      181 cgggtgccac ggtgtggatg aattgctcat tttgagggag cagccagccg cagatccgga
      241 cctccgcagt gcagtgaggg gctggcgggc acaaaggggg agttctgtag cgaactgaat
      301 aatgggaagc ccctttcatc ggcaggacta accttttggc agccaccagc acactctatt
      361 ctgatctgct gattggggag gacaatacac tgaagcttac tttgaatgaa tgctgccacc
      421 aacagtgtcc ccattcaggg gctttgggaa ccatctttgg ccattgtccc ccagcactcc
      481 ctcagacagc aggaaaaggg aaagtgagag cagctatagg gggaaaagta cttcttttct
      541 tggctttaat ctctctttaa agcttcatag atctacattt ccagctgagc tatgcagtgt
      601 cagataaata cagaagagag aggtttcaag ctgagctttc aaatcccctt atctgcatga
      661 actaataatg cagatttagt gctgttaaaa acagagactg agaagtcttt tcctttaagg
      721 cctttaaact gctaaagagc atttaacagc gatgtagttc aaacgcaatg aacaat
//
LOCUS       KCPA01003151             618 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 346849tic ultra-conserved element locus
            uce-4927, sequence.
ACCESSION   KCPA01003151
VERSION     KCPA01003151.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 618)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 618)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..618
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="346849tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>618
                     /note="ultra-conserved element locus uce-4927"
BASE COUNT          211 a          116 c          117 g          174 t
ORIGIN      
        1 aaacagaagc aaaaaaattc tcagagatca gctgttctaa ggagagaagc ctctaaaaac
       61 ttgctcaaaa aattactatt cattgtgaga tatcctcaga acaaactagt tcattaaagt
      121 cgtatcagca cttgtaattg gcccttgttg accaatagaa ggagacattt gcaacttttc
      181 ccaggaaatt atattctaaa cccttcataa ggtggacctt gtccttttct gaggaaactt
      241 gatagcagtc tttagtattc actggcataa ttaggactgc agttaatttc attaaattct
      301 cttgctgcta aatgaagcag attatgagac atcttttatt gcaaggcatg aaattacagc
      361 ctgtcagctg ccaatggtag agtaaaacta atgaattaca gggtaaataa caccagaatt
      421 aaccagccaa tttaacatag cagagaacaa agtcattttt acttggacca ccactgctgg
      481 gatccctttc agcaaaggga aacaacctca catctatttc ttgggcagca atgttagaaa
      541 accaatactg ccaagaagtt gggagaaaat tggaaggcac tgctaaattg tggtatgtcc
      601 aagtagtttg tgctgatg
//
LOCUS       KCPA01003152             780 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 346960tic ultra-conserved element locus
            uce-7979, sequence.
ACCESSION   KCPA01003152
VERSION     KCPA01003152.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 780)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 780)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..780
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="346960tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>780
                     /note="ultra-conserved element locus uce-7979"
BASE COUNT          206 a          193 c          195 g          186 t
ORIGIN      
        1 gagcaagtcc ttcttgcacc tcctctggtt cttaaccagc tggtggcatt cccgtgcagg
       61 tgatggtgtt ggagcgtgtg tatccagtgc tcccatctga taaagaattt ataagggaga
      121 agacacagcc caaagaaaat atttataact ggagcttccc gatgccgggc taatcaagat
      181 tatctccgat ggcagctaga gatttgattg acatatttaa cctctatttc tcactcttgt
      241 tctgcccttt tcccgaccta aggccaacaa agtaatttgg aagtcgaact tcacctaagt
      301 gttaatgatg aagctctggg aagtttctcc cgtaatgagg caccatgcag gaggaagtac
      361 cagttgggat tcctattgca gccatatgtg aggccaatgt tgcatgaatt aacatacggt
      421 gggtcaagtt aacatatgta cagtgaaaaa tgactaatga cttatcacac tgatgttatt
      481 tttggacctt cctgtacgca acctctccga ggcgaacaag ttttatgcct cgactgtccc
      541 ggttccccgg gaagaaagag gaaagtgaaa ccatatgttt agcaaaggga ggaaagcgag
      601 ccagagacgc aacgctggaa tatcagcatg gggcagcgcc atcctgcagc acacagccaa
      661 aggggatgaa tgcccagcaa tgtccccccg ccgccaggca gccgcggcag cggcgtgcct
      721 ggatgacaga tgctgccgga gccatcccac aggctgcatt cagtgccctc ggtgccactc
//
LOCUS       KCPA01003153             358 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 347068tic ultra-conserved element locus
            uce-4450, sequence.
ACCESSION   KCPA01003153
VERSION     KCPA01003153.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 358)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 358)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="347068tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>358
                     /note="ultra-conserved element locus uce-4450"
BASE COUNT           99 a           75 c           74 g          110 t
ORIGIN      
        1 cccagtttat gtggcacaga ccagcctgca ataatcaaac cagagctatt tagtgtatag
       61 tctagtctca ctgtgactaa taggatgatt ggttgtatag cttctttatg gttgttcatt
      121 atatcaccct tacataaagt aatttaattt cagtgggata attagggtat ttctaatcta
      181 actgatagtc ggaatgaaat gagattctca gagggagatt tgtgtaccag gagattggtg
      241 acctccggcc ccaattttca cacaatgtat taagctgaca gccttacttc caagccctgc
      301 tgcactggct cctcaccact tgtgcagatg ttacagacag caactctgaa tgaggctc
//
LOCUS       KCPA01003154             537 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 347176tic ultra-conserved element locus
            uce-5107, sequence.
ACCESSION   KCPA01003154
VERSION     KCPA01003154.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 537)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 537)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="347176tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>537
                     /note="ultra-conserved element locus uce-5107"
BASE COUNT          187 a           98 c          108 g          144 t
ORIGIN      
        1 tgcccaagcc cagccctacc agctctgcca aactgcacgt tagccagcga ggaggaaacc
       61 cacagaagaa tttccagaag gacaaaaaac ccatcaggtg tgtcaaatct ctgacattca
      121 gaaaccattt ggggaaagca gcacacgctg acttaagcac taaagtatgg atgctttaat
      181 taatccgggg tgaatttaat tgctttagtt aagtggaaat cgggttaaaa atgatgcaga
      241 gcatgctggg gtgtgttaaa aacatgacat atgaattgga tgaatcgata aattaaaact
      301 gcacagatgt tttaattaaa cccaggaaac ttaacgaaga tcactagaga cttttaagcc
      361 tatgattaat tcaattcatt taaaatacct gtagagatat ggggatgcct ccattttggg
      421 agttatagaa gttctcaatc gataagtact taagctgttc tacaaaacaa atggcatgat
      481 ttttacagaa gtgactggac agcattaact gcacaattaa tatttacatt cttctga
//
LOCUS       KCPA01003155             405 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 347286tic ultra-conserved element locus
            uce-3383, sequence.
ACCESSION   KCPA01003155
VERSION     KCPA01003155.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 405)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 405)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="347286tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>405
                     /note="ultra-conserved element locus uce-3383"
BASE COUNT          137 a           74 c           71 g          123 t
ORIGIN      
        1 aaaaatgtga aaatgaaaaa ggagtatggt ctcatttata ttgggatcag agcattgttg
       61 aattccccac ttttttttca taaataacag tatgactcca tctgtcaaag tggaaaagat
      121 tcatccaaag atagatggtg cccaactgaa agctgctgtt ggtccaactt gttctactac
      181 tgtgagttcc tcaataaaga ctggccttaa ttgtccctca ataccaaagc cacccttgcc
      241 ttcccctgga cagatactga atggtaaagg tcttctctct gtgcctccat ttttggaaaa
      301 gaaacctgaa gaaaatacga ataataggaa atttttacat aaaagattgt caggtaacta
      361 tattactttt agtagaataa ggaaataagt tcaatactgt aactt
//
LOCUS       KCPA01003156             709 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 347392tic ultra-conserved element locus
            uce-6818, sequence.
ACCESSION   KCPA01003156
VERSION     KCPA01003156.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 709)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 709)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="347392tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>709
                     /note="ultra-conserved element locus uce-6818"
BASE COUNT          207 a          121 c          148 g          233 t
ORIGIN      
        1 ccaacatcat cttttaactg gtggcacttt aaagcatagg gctaactgag aggacagcaa
       61 actttaagca ggaggctaga accttagctt cactttggtt tacagattgc aaacacaata
      121 ctgaacaggt ataggcacca aagtgtagga aaacagctaa ttatagtaat tgcagctggt
      181 ttcaaagtac ttctgacagt ttgtgcataa tgcttacttg aaagcatcaa atgggcgcta
      241 gttgtgaaat agaacacctg tttgttgttg agcatgtgtt tatgcagatg atttttgttg
      301 tcaaagcacc ttgatgtaga gtagtcctgt ttacatttac attctcccca aaggattaac
      361 agtgttctct caataaattt acagtctatt ctcctctcaa aggctgctgt ttggagggtg
      421 gtgtgaacaa ggcaacaagt gcttgctaat cacttgaata tacataatta gcgacagtct
      481 ggtgcactgg agtctttgta cagccacagc aatactgatt ggcagcagca gataacaata
      541 gtcgtggcaa ggtggtattt gttgaatatt tgaaggtgtt tttcttttat atttgcagta
      601 ggcattttga gttaattaca ccattattct ggaacacact tactatgtta ttttaatgtc
      661 aaagatcagt catgtggcct gtttagtaaa tcctttattt cttttaaga
//
LOCUS       KCPA01003157             835 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 347506tic ultra-conserved element locus
            uce-772, sequence.
ACCESSION   KCPA01003157
VERSION     KCPA01003157.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 835)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 835)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..835
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="347506tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>835
                     /note="ultra-conserved element locus uce-772"
BASE COUNT          269 a          155 c          145 g          266 t
ORIGIN      
        1 taaatgaaat cattactgaa tatggcctca caaggcaatt ttaaaccgtt cttgtctata
       61 cccccttgtc attaactggt aaatcagtaa tttatttcct attagaattt atatagtttg
      121 cagcaattaa gaagaaaagc ataattgctg acaaacccag ggcactattt aaatcacttc
      181 cttgttgaca acatatttct ccttcctaaa actgaatgtc actgaaatct gatttgaaca
      241 gaacccttgt ggactcatca ttcaaatgta ctgcacctgt cacctgtgtg ctagcattct
      301 gctaaggatc aatttacata acctcattta atggttcata aatcataccc attaagccca
      361 gctaacagga accaagggtt ctaatttatg ctgcctttca tagcagaaaa ttgggaggct
      421 ggagcctgtg gataaagaac ccaggtcttg cctttgattg ttgattgtga tggtaaatgt
      481 atggatgatg agaacagatt ttcactttat tgatttcctg ccaaagcaca gcatgcttta
      541 ttgtgaaagg gggccttttg gcagcagtgc taaaagtggc agttgtttag gagccctttg
      601 ccaagatgac atctaagaca ataccgaatg gtaaatacta aaataatatc aagctgaaat
      661 gttaattttt aaaaagaaac atccccaaaa aaatcaatga tgttttctac cccagagcac
      721 cttgctaata aacatgaagc caggtgatta ctgtgggttt ttctaaaatc tatttttctt
      781 aaattctgga ttctattata aattattcat ggtatttcag tcaaagtaat gcaga
//
LOCUS       KCPA01003158             437 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 347613tic ultra-conserved element locus
            uce-4140, sequence.
ACCESSION   KCPA01003158
VERSION     KCPA01003158.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 437)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 437)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..437
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="347613tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>437
                     /note="ultra-conserved element locus uce-4140"
BASE COUNT          137 a           83 c           72 g          145 t
ORIGIN      
        1 tcttttctta gcaggactta tgcctggaag ccctgtgatg taaaatttga ttgctacaat
       61 taagggacaa atatcctgct gttataagac acatgatgca tcctgtgatc tcaacttgtt
      121 acacattcat atcaattttg atcaaacgag ttgactgaca ttcaaatata atggttaaaa
      181 cctctgcacc acagatatac aacttcaacc ttttgaatgc tgtcattcca tatatggact
      241 ttacccacat tttaatgagg ctttaaaatc cctgagatta agctagtatt ttatatagaa
      301 ctacctgttt tttatgatat tctgacatgt tgtacaacat ttgtgactat attgatcctt
      361 ataaattcag catccaaaca gcagggcagg ggggcagttc ttgagcctca gcagtaaaga
      421 atattttagt agcacaa
//
LOCUS       KCPA01003159             521 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 347717tic ultra-conserved element locus
            uce-7537, sequence.
ACCESSION   KCPA01003159
VERSION     KCPA01003159.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 521)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 521)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..521
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="347717tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>521
                     /note="ultra-conserved element locus uce-7537"
BASE COUNT          159 a          114 c          126 g          122 t
ORIGIN      
        1 gatgctggag cgctgtccca aatggcagac cagagcctgc tgattatatc cagcctgaga
       61 gccctcagta cgagcgtgcg ggagaagggg gatgcttatt agaccgaatg ggagttgcgg
      121 aagcggagcg ctctgcggcc ctgaggatgt aaggaagatt tgctaacttt gctttatagt
      181 attcatgcag ataaggaaga ctctcagtct ccaatcataa atcggtatta tacagtatac
      241 tcccaaaggc cataattact tccagaagca gaaatttgaa tgacccagat aattagttca
      301 gtgtagctgg tccaaaaatt atttacataa aagccagttt tacttgaggg ggaagaaaaa
      361 caaccttgct accaaaagca aatgacccag ttagcttcat gcaatgagtc tgaggagaca
      421 gagcatgagt ggcaccacag cggcctgtgc catcacttct tccctcttgt tttcagagga
      481 cacacaacaa gcttctctat agacaaacat gcaggaaggc a
//
LOCUS       KCPA01003160             674 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 347823tic ultra-conserved element locus
            uce-4591, sequence.
ACCESSION   KCPA01003160
VERSION     KCPA01003160.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 674)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 674)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="347823tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>674
                     /note="ultra-conserved element locus uce-4591"
BASE COUNT          197 a          153 c          128 g          196 t
ORIGIN      
        1 gagaggcaaa caataagagc tgagaccaaa ccagtttgcc ttctccttcc ttgcagtgca
       61 tgtaatgact gaacttttga ctttaaagtt tttctctggt gcaatactgt agaaaaagaa
      121 acaaataaac aaacaaacat ccccttggtg cagaccagtc taaggcaata cctggtgagt
      181 ggaatggttg ttgttgttta cttgaagcag atataacacc caccttaaac ccgccctcta
      241 ttcagttcag cagcacctcc atactccaat aaaccgtttt cattccatct ggcgtgcgtt
      301 tgctctgaag acattttcct gtcaatctct cctgccacat taaaaatctg tcattactat
      361 tgcattgccg cctggctcct gagatttgtc tgactgcttt attgctccgc tcactgctac
      421 agccgagaag cagaaataaa ggtttgttgt tgaaacatgg ccgcaaggaa agtaggaggc
      481 acacatctgt caaggtatta cctttcttca accagggatt aaggtgtttt actgctctcg
      541 ctactgagca gtcacactga ataaattttc tcagtagaac ataaaaatga actcatacat
      601 tttgaactgg gtttcattct ttcaagccaa cccatataat tatgcaatgg catcagtgtt
      661 tgggggaaaa agaa
//
LOCUS       KCPA01003161             711 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 347933tic ultra-conserved element locus
            uce-2529, sequence.
ACCESSION   KCPA01003161
VERSION     KCPA01003161.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 711)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 711)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..711
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="347933tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>711
                     /note="ultra-conserved element locus uce-2529"
BASE COUNT          253 a          114 c          150 g          194 t
ORIGIN      
        1 atgcaacagt atcaataatt ttaatataaa atggtaaaga catggaaaaa caaaaccaaa
       61 aatttactct tgtgcatgaa tgtttcttta tgatccaact tgcaacattt ttatagtctg
      121 tatgtctgaa agaacataca tataatgatg tttaaagcat agtcgagagc aaaattattg
      181 cagtatatat atagtgaagc catataacaa aagagcagta gctagtgttt gcccttatat
      241 gagatgcagt catataatag agagccttaa agctagggtt tactgtactt tgggaattaa
      301 tcacataaac tataaattgg gttcaacagg ctggctgggt aaataggcgc agctaatgag
      361 gacactatga gatcttataa gagcgctgac tgccccagga caaaagtgcc gagctgcacc
      421 tgatggaaaa ctagaagaca tcaaagcata aaggattagt gctctcacag tgttgagaaa
      481 tggccagggg gagattcacc aacttattac ccacatccaa gctaatcctg ttatctgcaa
      541 aatatgactg tgttcaggaa ctgccaccac ctaaacttgc aggagactaa ttctgtgttt
      601 acatggacaa aagtgcgggg aattttcatc tgggcaaaga atatgagaga agagaatttt
      661 taagggtttc ctttgtatcg aatgcttgaa gaggggaaaa tataaaatta g
//
LOCUS       KCPA01003162             801 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 348046tic ultra-conserved element locus
            uce-4863, sequence.
ACCESSION   KCPA01003162
VERSION     KCPA01003162.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 801)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 801)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..801
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="348046tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>801
                     /note="ultra-conserved element locus uce-4863"
BASE COUNT          197 a          163 c          142 g          299 t
ORIGIN      
        1 agaagaacta tttaacatgt tttattttgt ttttcattta atattataga gggaaggttt
       61 ttttgttctt tgattttctt atttctagtg ttgaaaccaa tatgttttaa aactaaagga
      121 tgggttaata agcttgaaat agataactac aactgaaaac tgcacattaa gtaaaagaaa
      181 agaaatctcc tattttgtct ttgttgccag aaatcacagt gtagtgtcaa acactccaaa
      241 tgactgtcaa atataaattc ttcttccact ccatctttgg cagctgtttg ttaaggcatc
      301 taataacaga tgtgagaact gtaatgtgta caatgtgtaa gtgtccttgg ctgtcagtcc
      361 cattgcagtt tcaatgtgtg ttactatatg cagtatatac taagctaatg tagttgtttt
      421 gtcctttgtc ttctctgtgc tttatctcta gtccggagtg gtaaagtccc attcctgcag
      481 tcctagtgaa ccagtgattc ttgggggtta gtggtttttg tgtggtggcc ttcctctgta
      541 atgtcacctt atgctgcttc cactgtctgt atacctttta atttctgctg ttgctttgct
      601 gttgtgtatt ctcaaacccc cttcctttct ccccacacgt ttcccctctc tctttcgctt
      661 gctctctcgt tctctcttct tcactcagag ataaaagact cttaactagc tcaaggttaa
      721 tggagccatt tttcccacag aggaattctg ggtatgactt actcttccag tgcaccccac
      781 aatgcactac agagtaatgc t
//
LOCUS       KCPA01003163             940 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 348155tic ultra-conserved element locus
            uce-1624, sequence.
ACCESSION   KCPA01003163
VERSION     KCPA01003163.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 940)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 940)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..940
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="348155tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>940
                     /note="ultra-conserved element locus uce-1624"
BASE COUNT          277 a          190 c          145 g          328 t
ORIGIN      
        1 ttgactatca tttgtttatc aggaaaagac tggtctagac cttaatcaaa atgaggaaaa
       61 ttaagttcct actaattagg gagtctcagc acttgctaga tcttttcaaa gatgaagagg
      121 ttaatcattt gcagtcagac agtaagaaat gaaccacttg tctcttcctt catcctctat
      181 gcagttcttc catttcaaca tccttgttac taaatctgag acaatgtgta attatacaga
      241 aggaaatctc tctggggtat agctgaagtt gcttaaattg tgctgattta caaagatgaa
      301 gtatttttaa aaaaaattac ctttttttca taatggcaaa caacctcctg caaagtcaac
      361 tccttttctg aaagtcattg ctagttttat aatttctgag tcattagata acagatagaa
      421 ctccacactt agtggtttca aatgtttatg gtctgcaatt cattcttaat gagctctctc
      481 catgtcttta ttcttcttca caccctcctg ctgggaaatg tcttactctg ccttggcttt
      541 tgttaatgat tccacaatca tttcagagcc atttcttctg ccttatgtaa ttctgacact
      601 gcataagagc ctggctctgc agcctcacag ttggaaatgt aacctttaat gtattaattt
      661 ctcttgctca aaacaattta acctctgtct tggttttgtg attgctaagt gttccaatta
      721 aatgcctctt tcatattttg tcctggaggg cttgatctta ccagtattat gtttaacata
      781 ccctacctag caaatgatga gcactccagg gtcccctcaa gtgttcttta tcaatccgtt
      841 atctatctca tgagtgtctg tcacattttc agaacaacaa cagaagagat taattaaact
      901 acttttaaac actaaataac aaaaaccact ataagtggaa
//
LOCUS       KCPA01003164             836 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 348267tic ultra-conserved element locus
            uce-6823, sequence.
ACCESSION   KCPA01003164
VERSION     KCPA01003164.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 836)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 836)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..836
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="348267tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>836
                     /note="ultra-conserved element locus uce-6823"
BASE COUNT          276 a          133 c          121 g          306 t
ORIGIN      
        1 gacatatata taacctttat ttaagatgac aaaaaactta aacatatctt tcagcactgt
       61 cttatgcaaa cagagtacat cactagcctg ggcaccaagt tatttaaagc tattatttag
      121 tactgtaata agtagcaatt taaacacaag gtaaaatcat tacattgtct tgtttactac
      181 tgatgttaat gtcaagctga cgtgtaatgc tccaaaaaaa ggcagcctat gatttgttat
      241 cattaaactg tcagttctgt cgtgttaggc atagattcat actatattct ttcagcatat
      301 ccctttattt tctatcagtc aaaaactgaa gtgttttaat tgtgtctctg ctatttttct
      361 attaactgtt tcgtgcattt tttccctggc cttttaattg cagtttaata gtggtcatta
      421 acacattaag gggtgttaga agaacatttg aagtcctctt gacttctacc aaagttgaca
      481 cttcaatgct agagtaattt cagctattca tttatttaat agtgacctat gcaaatgtgg
      541 aaccatgtca ttttacaaat tgactgtaat aattaactag aaaggcagac taaaatgaaa
      601 caggttataa ttagaataaa actgctacag tattacgtca gctagaataa aataatctca
      661 aatgattaaa ttggtttcaa ttattaagaa tcagtttaat gtacccactg ttctgatttt
      721 ttacatttct cttttttgtg tgcattagat gtcacctcat acaatttatg cattttattc
      781 atcttggtaa aacaggcatt acaaaagttt aattaagtag taaaagactt catatt
//
LOCUS       KCPA01003165             702 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 348379tic ultra-conserved element locus
            uce-3609, sequence.
ACCESSION   KCPA01003165
VERSION     KCPA01003165.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 702)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 702)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="348379tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>702
                     /note="ultra-conserved element locus uce-3609"
BASE COUNT          235 a          130 c          156 g          181 t
ORIGIN      
        1 aagacataat gaagcctgaa ttaaaaatgt cagtttctgt gaatgttgat aacttggttc
       61 tttgttgcac aagtcaaaat gtgtctgttt gatgggttaa aatgacagtg tgcaaatggg
      121 agaagctaga gctaaaaaaa gaagacactt cccaaaagac ttataaaaag taggcccgta
      181 atgcagtact ttaaggagaa gacctgtagg gtagaagagc cagtatcttt agaaagtaac
      241 caagcagcac taaaaggcaa tgtccatggc caatcaaaac tatttctcta gctgctgggg
      301 ctcttgcatc tctgtcttca cactagactg gaaacccttt gtactaattg ccagactgta
      361 ccagattttc tggttcagtt ccatcccata attgaccgac aatgatgggc aaggaagggg
      421 aaaaattcag gctcaccact gcaagcagag ggtcagaaat ggtttcatag ggagcacatc
      481 actgcttggc actaaatgca gggttaagca agcatcatct gtactttctt ctaattccta
      541 ggttaaaagg gggataaaaa cattcacact gcagcagggc aaagagagca ttttaaaagc
      601 tggcatggct tctgcaaaaa tcttccatag agacaagaaa atgcctggaa gatttttgga
      661 agttggtctc taactgcagt gcattactta aataaataaa gc
//
LOCUS       KCPA01003166             623 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 348491tic ultra-conserved element locus
            uce-2442, sequence.
ACCESSION   KCPA01003166
VERSION     KCPA01003166.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 623)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 623)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..623
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="348491tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>623
                     /note="ultra-conserved element locus uce-2442"
BASE COUNT          172 a          125 c          139 g          187 t
ORIGIN      
        1 gagatttgaa gtgctctatg aaagcacttg tcatttcttt gctgtttttc aggagtttgt
       61 ggagaatagt aggaagtcta tgaaagaagc tggccgggga ggtggagctg agggcagaga
      121 gctaaaacca atggtaggtg cagatgagga ggtgacgatc ctccaagagt ttcactttta
      181 cttcttctcc ctctttgtct ttactgactg cacttcttca ggagaagttt ttgttctctg
      241 tatcactcaa gatgttctgc tttttctgtt tgtgagcttg cctatcacct ggatggcaga
      301 gtttttgtca cagctgagac catctcctgt aaaagtaaga tgaaaggaac tgtctcatat
      361 gaaacaaatg cagtcatgcc atgtggtatt tgcagacagc cccagctgct gaatagtcta
      421 aaaataagat ggctctgaga tccctgagat gaacaatttt tgctcataca ttcactgcaa
      481 aaacctgaaa cgaaggacac tactgcgtgc atccattgtt gcaaagtaag accaggtttt
      541 aaagacctca ccaaattatc ttatacagtg ccaaggaatt ggatacagtg attcctttca
      601 acctgctcaa atgacatttc tcc
//
LOCUS       KCPA01003167             734 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 348600tic ultra-conserved element locus
            uce-5215, sequence.
ACCESSION   KCPA01003167
VERSION     KCPA01003167.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 734)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 734)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..734
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="348600tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>734
                     /note="ultra-conserved element locus uce-5215"
BASE COUNT          147 a          186 c          167 g          234 t
ORIGIN      
        1 cagcgctgtt tcagattggc ctttttatgt ttgatataaa gaatagttgt tggccaattc
       61 catcttttca tcgctgctct ccaggcccgg gtccaagcgg cttgtcagat gctcattaac
      121 tccccctttg gctctttcca gtgtgtctcc taagctcatt gtgccaagaa ctagcgcttc
      181 tttctcttta catggctccc tttctctgct ccatcaggga gacaaattac tttccaaaag
      241 ggatcgccag ggatggttta atgagaattt ctccagcgct ggccgtggaa atcaatgtag
      301 ttaacattcg gtgcacttaa ttggactttt ctcttctgcc tccttcaaaa aaactctgaa
      361 gctatcctgt taatctctca tttgtaatca attgtgttga ctaaacaaaa gtctaggtcg
      421 tcctttcttc ctgtcccaga caatcctttg ttgcctctaa atgcctcatt cttgagtgct
      481 cctggtcgtg tagatgggtc cgatttttga cagttcatta ttgcgctttt gtccatttaa
      541 tctccctcgc tgtgttttgc atgtgcatgc cttaatgagc tccgttggca attaacatgt
      601 ttctagcagc aaactggttg ctcagacgtt tggagagcgg agtgcaggga aaagggcaac
      661 gcagctgcct tggtcgcttc ctggtgcccg gcgcggtgcc gggacgcacc tgggagccgc
      721 ccggtcccgg ggaa
//
LOCUS       KCPA01003168             734 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 348707tic ultra-conserved element locus
            uce-603, sequence.
ACCESSION   KCPA01003168
VERSION     KCPA01003168.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 734)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 734)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..734
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="348707tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>734
                     /note="ultra-conserved element locus uce-603"
BASE COUNT          201 a          148 c          178 g          207 t
ORIGIN      
        1 ttttgaaaat ggcacatctc agaggtactg ctttcaaaat gatctcaggg tgtaaaagaa
       61 gcagtaataa cagcaccagg ctggcctaat tttcccacca gtttttcaat gtttcagctg
      121 tctcagggag ttaaagtact ctcattaggt agctgcagag gcttgcttgc ctgctccatc
      181 actctctcga gctgcctctc tcgctccccc cccctcctgc cttgggagtg actgtgaaga
      241 tcatttgctg gcatgattgg caggttagag cattcgatca gatgagttcc tcttagtgta
      301 ggtcaaaaag gctggttagc aggagctgtc gaaaaatgcc agcagcattc gaaatgggaa
      361 atgtcatgac ttcgaggcag ggggtgccac ctggaacaga aagcccccag ctcattagca
      421 agttacagga tgcaagctta actggaggga gcagaggacg aaaaataata cccaataggg
      481 aaaattattg tgaagtggaa ttgatttcat gtataatttg tttatcactg gaggggacaa
      541 atgctgtcct cctgatatgt gtggaggagt gtggactatg aatgaagcaa tttagcataa
      601 tctccaggtt gagctctgga tttaaagaat gccaacttct ttcttcccag ctgtggaagt
      661 gatcaggtca tgttgtatta atttaacctg acatactttc aaatggttta tctgggcaat
      721 tttagcaatt taac
//
LOCUS       KCPA01003169             580 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 348815tic ultra-conserved element locus
            uce-5576, sequence.
ACCESSION   KCPA01003169
VERSION     KCPA01003169.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 580)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 580)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="348815tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>580
                     /note="ultra-conserved element locus uce-5576"
BASE COUNT          172 a          115 c          117 g          176 t
ORIGIN      
        1 gtttattctt cttcaattta ccacttccat tttgtattta ttaaggaaac gtggctgtta
       61 gcaatttcag ctaccccatt gtgctcacat tattcaagaa acctaataat ccacatgaac
      121 taattctgac ttactgatgg tctgcttcac taaatcaggg tgattttttc tagtgaataa
      181 tggacgatgc agtgtgccag taccttaatt aaagagagcc tcttattctt gatcttattt
      241 taatttacag ggtaatacta caataatatc actaatggaa ggtacattaa agggcataaa
      301 gtagcattaa ctgtattaaa ttatggcact tgtgttaatt aactgctgaa gcaagatggt
      361 cctaacagct agaaaggttg actaatgcat aaataaagtc ttctgggatg ggaagctaag
      421 aaagagcaga caggccttgc tgcagaggac cagatcctgt gccacaacct caggaaggtt
      481 tctttcactg cagaggtggc ctgacctgtc tgcagtctct acctgtcttc aattccacgt
      541 gaaggacagt cctggcagta agcagtgagg tacagctccc
//
LOCUS       KCPA01003170             497 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 348926tic ultra-conserved element locus
            uce-5377, sequence.
ACCESSION   KCPA01003170
VERSION     KCPA01003170.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 497)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 497)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="348926tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>497
                     /note="ultra-conserved element locus uce-5377"
BASE COUNT          132 a          110 c          131 g          124 t
ORIGIN      
        1 gtcccccctg cctctaagcc taactgctgc tccctccctt ctcccaaaaa aataaaaata
       61 ataatagggg taataagaga ggaggtaatg gaacgttctc caactgggca catgtcagaa
      121 gccattatat gtggtgcaga tttgcataat tcaagaagca tcaaattaaa tttgcataat
      181 tcctttgatt acacttgtta ttaaatgtaa gtgacattga tttacaaaat ggcccaatat
      241 aaggttaata gcaaatgtca ccttccagca gggtgaatag ggtgcatgtg cggtggtggt
      301 ggtgatggag gagggggaga ggggggcctg gggaggaagg cgagcagaca attgatttct
      361 gctcctctct cttccttaaa gggctcaggt ctcctttgca gaggagcccc cgactctccg
      421 agggctgcac tgggccaggg acacagtgtc atcaggacac cctgccaagt ggcattggtg
      481 ccatggctct gctgcct
//
LOCUS       KCPA01003171             665 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 349031tic ultra-conserved element locus
            uce-5677, sequence.
ACCESSION   KCPA01003171
VERSION     KCPA01003171.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 665)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 665)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..665
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="349031tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>665
                     /note="ultra-conserved element locus uce-5677"
BASE COUNT          202 a          142 c          123 g          198 t
ORIGIN      
        1 aatctatgca attttctgtt aataaaaaaa taagaaagaa actaaagctc ttcctcagaa
       61 atctagacat tagcatactc gccctaatac tttaatcccc atcattgttt ataatcgggc
      121 tacacacaag gttacgcaca gtgctgactg atttatcata tattttcttt taattgaaat
      181 ggcaacattt aggttccacc ttaacagtgc accttaaaag attatctcgg ttatttcaca
      241 ggcaccgagc cggcactaat agtccaaggc agatattgaa aagcagcaca gggccaggca
      301 gatctattag aaattcccat ccacgcgcct catacatatt gatttctgac accaagcagc
      361 agtgaaagcc cccgtgggaa taatatattt agcagggttc gctgcgagga ggtcacagag
      421 tgcatacaga ttagctacag aggaccaagg cactagtgtt ggagccaaat gctagatttt
      481 atatcatttt aatctgaact tttataatcc ttttagttct tctttctctg gatggcagag
      541 gaaaggctcc tccgcatgta tcatgcatct tttttctttt ccttctttat tcctcctata
      601 aatgtgcaaa tgctgttgta atggggagga atgtaccctt agcattagca ggaataggca
      661 caaac
//
LOCUS       KCPA01003172             669 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 349137tic ultra-conserved element locus
            uce-5497, sequence.
ACCESSION   KCPA01003172
VERSION     KCPA01003172.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 669)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 669)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..669
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="349137tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>669
                     /note="ultra-conserved element locus uce-5497"
BASE COUNT          177 a          140 c          125 g          227 t
ORIGIN      
        1 ctcctaccac atctcgtggc taccaccttg gccaatatta atcggattcc tgcacagtca
       61 gcaaattctt tgggaggaaa gaatccgccc tccccatgca tattactttt cagcagtgtg
      121 caactgtaat cagtggaact cagcttggca attttaatcc tctgctgtct agtttggggc
      181 tgcttgttat gcagccagca ttcactcaac ataatggttg ctacctgcca atgtgctttg
      241 agggatattg ttagcattaa atttgccatt tacattttca tgtttgacat aattgaggaa
      301 tgaatgctct tatgaaaatt aaacttgtgg tcctcctgga ctactgtaac cctgttaaaa
      361 tgtaatgcga ttcttgatgc gtcttcttta ggtttttatt aaatagaata tccgtatgac
      421 taattcccct ggcctaaatg taggctggga aggaacatta ttgatagggc tgagcacaaa
      481 tggccctcta tactcagcct ctaatggcct aataatgcat tatacttgaa tcagaaatac
      541 tttgagttgt agtgcttatt gccattattg aaaacacctg gatgctccat tcatcaaggt
      601 tacatcaaaa tgggcccatt tgtttattag tctgtcagta aacatcttta tttagtttca
      661 tgttcctct
//
LOCUS       KCPA01003173             418 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 349244tic ultra-conserved element locus
            uce-6437, sequence.
ACCESSION   KCPA01003173
VERSION     KCPA01003173.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 418)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 418)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="349244tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>418
                     /note="ultra-conserved element locus uce-6437"
BASE COUNT          125 a           75 c           94 g          124 t
ORIGIN      
        1 ttagtttaat tttgttattt tttatgaact ggaggggcta ggatggggct aaaatttccc
       61 cttgaacatg atgtcaatat gttggcatgt ctccttttat taagatgcca tccaactgat
      121 aacaagtcct gctgtgtttt accaacataa aaaattagac tggagaccag ggagcggcag
      181 gtggcttttg gcaccaagaa ataatcacac ttgatgtgga aagtaaagta aaaggagcca
      241 tctgttcact gcaggaggac gtgaaaaatc acattaacat attgtcacta acatcatgaa
      301 atacacagtt aataataaat ttagttatca tggcaagctg cattgggtgc ttccttagaa
      361 caggtattgt gtggaagcac ccttgttgag ctctgtcctg gctgctgtgg cagcccaa
//
LOCUS       KCPA01003174             604 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 349354tic ultra-conserved element locus
            uce-4608, sequence.
ACCESSION   KCPA01003174
VERSION     KCPA01003174.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 604)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 604)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..604
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="349354tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>604
                     /note="ultra-conserved element locus uce-4608"
BASE COUNT          177 a          125 c          117 g          185 t
ORIGIN      
        1 tttaaattac ctttcaaata aaataaaata accaggaggt ctagcacctt atgtcactaa
       61 gtcacacagt aagagggacc atcaaagaat ggtgggaatt atcacagcag cttgctcctt
      121 gttagaagca tttacctcat gaccctttca tttgcctact gccactttag tttaagagtg
      181 acaacactgt atagcactct gcactttcca cctcgccacc ctttccctta gcaccagatg
      241 cctttgtaaa gctgcctggt gaaggagtga acaaaacctt gtgggataag tctgacactg
      301 gaagttaatg attatcagtc gaaacaaaac acttgtttac atgttgtagt cattagaggt
      361 tccagtcagt catacctcgg ctgggattcc tgccaaatgt tttgagggtt ctttcacaag
      421 ctgtgcagtt ttgtaaatac aaaagcactc ttattaagcc tttttagtat tagactgtgc
      481 aattaagact acgggtaatt agattccttt attgggagta gaatggtcca agatactttc
      541 ttagccacag aataccatgg tatctctatt tgggtgttcc attacagatc agtgactatg
      601 agaa
//
LOCUS       KCPA01003175             373 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 349551tic ultra-conserved element locus
            uce-6771, sequence.
ACCESSION   KCPA01003175
VERSION     KCPA01003175.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 373)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 373)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="349551tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>373
                     /note="ultra-conserved element locus uce-6771"
BASE COUNT          105 a           90 c           81 g           97 t
ORIGIN      
        1 taaggccaag tagcaggtat gcccttgtgt ccatagaggg aggcaaggaa aggccaggca
       61 ctctctttct cctccctccc tccccactgc tggtggctcc taaaaggatt aattagaaag
      121 atgtgagcag gggttgggac gtcaaaaaac aatcgtcact ttcatatctg acccctatca
      181 ccagctgcag aattaacaaa ttgaatgtcg tcagcaaaca ggagttgcag atgatatgaa
      241 gttcattact agcagcacag ggcttgtttt caaagcccag tttaaacaac tcttgctgat
      301 taaattcctt gctggggctc ctgccagaca catttagaaa atacggatgt ctaacaactc
      361 tgtctttctc tgc
//
LOCUS       KCPA01003176             513 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 349660tic ultra-conserved element locus
            uce-2780, sequence.
ACCESSION   KCPA01003176
VERSION     KCPA01003176.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 513)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 513)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="349660tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>513
                     /note="ultra-conserved element locus uce-2780"
BASE COUNT          154 a          105 c           84 g          170 t
ORIGIN      
        1 tgtgtgatga caaggagagc atttacaaaa cagagtcgaa atgaaaagct gacatagctt
       61 tttagattat atctcattct tttttctgct ttctgtatag cctttctttt atagcacagt
      121 tgaatcccta aataccccac tactttgtat tgtcaggtca cctcttaggt tagcctcaga
      181 aagcctgaga aaagttccac aggaaagatg cactatttaa cggaattcaa tctgtcccaa
      241 tagatttgaa tcactaacat aaatgtatga atgtagatta tatctctgta atgaggcctg
      301 aatcattctc agttacttca aaggcctgaa attcaacctt cctttttagc agcaacaatc
      361 agaccttaat gggtttcttt attaattgtt ccactgctaa gcttgaaaag cggctacctt
      421 cagtacaagt cctagactag aaattacctg ctgctcaaaa acagtgtttc tgttttgcct
      481 tttaaattct gtgtaacatc tccagcactg tag
//
LOCUS       KCPA01003177             685 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 349769tic ultra-conserved element locus
            uce-2415, sequence.
ACCESSION   KCPA01003177
VERSION     KCPA01003177.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 685)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 685)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="349769tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>685
                     /note="ultra-conserved element locus uce-2415"
BASE COUNT          190 a          175 c          151 g          169 t
ORIGIN      
        1 tggcagagtg cagtgttcct tgatagctga tttacatcac cccttatttt tagcagccac
       61 tggagtggca gagggctgtg tgacaatgac ggctgctgat caaagtgaca gagatgagtc
      121 agcagtaagt gcagagatac cagaccttta ggaggcatcc tgagatggag caggaggatc
      181 cttattctca ggctctggag gaggagctgg cacattttcc tctttctttt gtgcagccaa
      241 aaattcatga atcgccctct ctatctgagg cctgaagatg tggtttagtt ttggatccac
      301 cacctgagaa ataattctgt ccactccagc ttccagcatt cctgaccttg aacaaagaca
      361 aagaagtcat tcagctcctc tgaaaaactt ctccccaatc tcctccagaa actctccaga
      421 gccctcctgt caactgcaat taacattaac acggtgagaa ctgcagccta ctcaggagat
      481 ccttaacagg gacttgtttc actccctctc cctgctccct acagaattaa caactcacat
      541 ctggtctccc aggtacttaa atgacacctt ggccaagagc cacttttaac agggctcctg
      601 tggaaaccag gtcaacatgg aagcaaacaa acaccttttg gcacaaaaag agaactaagc
      661 tattctgagg aggagggcag gtgag
//
LOCUS       KCPA01003178             399 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 349877tic ultra-conserved element locus
            uce-5568, sequence.
ACCESSION   KCPA01003178
VERSION     KCPA01003178.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 399)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 399)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="349877tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>399
                     /note="ultra-conserved element locus uce-5568"
BASE COUNT           80 a          144 c          106 g           69 t
ORIGIN      
        1 aaggggatgc cttcgcacgg tctgatcatc accataaaga gttaaagaga gagtgaaatg
       61 gctaacgtac acacaccccg ctccataccg gagaagagtc tcccagctga ggtttatgct
      121 ctgtgaggac caggctgaaa ctgaccgccc ccacggccac gctggacacc cctaacccta
      181 tctccagcac ggagagcacc aggaggctcc cgatgatctg gctgctggtg cacatcctcc
      241 ctcggtcatc cttccttccc gatcagccgg ggaaaccgcg catcctcctc ctcctcctcg
      301 gacgctcccg cagccctaag tcgcccccaa acttttcttc cttcgccggc agccggggcg
      361 gagcggcgca tccgcggccg gcgggcgcta ccgaggggc
//
LOCUS       KCPA01003179             592 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 350093tic ultra-conserved element locus
            uce-3497, sequence.
ACCESSION   KCPA01003179
VERSION     KCPA01003179.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 592)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 592)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..592
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="350093tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>592
                     /note="ultra-conserved element locus uce-3497"
BASE COUNT          196 a           98 c          117 g          181 t
ORIGIN      
        1 attgaagaaa agcaggcaag aaaagatggt tatgtattag tacaatagct cagaggcttt
       61 tcattttagg atacaaagag ggagtagaga atgctgtttt ctttttaaaa accttttaaa
      121 aatggtaact gcatcctgct cttgtagatg tattacttat gacattccag ttttcatccg
      181 ttcatgattt tacattagag ttaaatctct gcagcttgaa tctcacggct gagttagcca
      241 gagcccataa aatattgaaa cctttagagc agcagccagc caggttgaga gaagttcatg
      301 tccaaagctg agctttagat tctgagacat cccaattgga gtgtagtaca gaaaaaagca
      361 ctgataaaat tttcataaaa atgagctaag gatattgcta gcatgcttcc cagcatctat
      421 atgaaaactt aatctgagct aatggaaagg atatgaaagc ctttctcaat tcaaacacag
      481 tcagtgcata attcataaat tattgtcaga gaagtgattc tgctctgaga tttattctct
      541 tttggataga agcaactgga ggaaaaactg ggtctttttg acctttaatg cc
//
LOCUS       KCPA01003180             473 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 350203tic ultra-conserved element locus
            uce-5186, sequence.
ACCESSION   KCPA01003180
VERSION     KCPA01003180.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 473)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 473)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="350203tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>473
                     /note="ultra-conserved element locus uce-5186"
BASE COUNT          154 a           93 c           87 g          139 t
ORIGIN      
        1 agtgtagcat atattattcc tgcaacatgc tctattctcc atggagggct tttcaacacc
       61 aaaatggggg acaaggtgaa gagaagggag tttaaagtgc aagctgcact ctctgctcca
      121 aaaagcacac tatgctgatt caaaaaaaac attttcaaaa atgcctgtgg gtaaatttga
      181 gctgcccaca gctccccagg ggcagtcaaa cttgctgtcg agccatttat gtggatttca
      241 gtcaaattct aattttagtg ttcattaaac atgggtaatt cccaagccaa tccctgcatc
      301 actctacaat ataggtcatc ctagcttaga aaacatatac agacatcaaa gtgcaaccat
      361 ttcattgtaa gtattaactt tataaataat tatgaacttc ttaattcctt acaagatgct
      421 gtataatcac aatttcttta caataggaag agggtgggag gttctggtat ata
//
LOCUS       KCPA01003181             690 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 350310tic ultra-conserved element locus
            uce-4287, sequence.
ACCESSION   KCPA01003181
VERSION     KCPA01003181.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 690)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 690)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..690
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="350310tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>690
                     /note="ultra-conserved element locus uce-4287"
BASE COUNT          225 a          117 c          111 g          237 t
ORIGIN      
        1 aaaagtgctg tgcaaagtac atattttgtg tacgcatgtg aaaaacgcta agaattgttt
       61 agcaactgga aagactgttc acaaaatgcc tttgatttat tgctgtatat accacagatc
      121 tgtatcacat attcctacat tattttattc aaaaacttgt atgaaccatg agttggcatg
      181 ttgtggaata ctgaaaaggc attaatcaac ccaaataaac aagtacatag atctatctaa
      241 caactatgaa gtagttaata aatttttagc aattttatta cagaaaagag gtctaaaaga
      301 gtagtgctta attatctgga ctcctctgtg ctgggctgtc ttttgattgt attaatgaag
      361 cagctggcct attgtttctc tttaattccc ctattgtttt aagaatatgt cacagctctt
      421 tattctttta tcaggtgctg tgcaggagga ttcacacaat aactcatatt cctactgtat
      481 ttgccaatgc acaaagaaac ctccaaagca tttttcaaag aaggggcaca cataatttat
      541 aagttctgtt ccttgtacca ctccactgtc aaaaatttca acagtattgg atttgaatga
      601 attataattt tttattaaac aatgtgtcca catatagata tatgtacttt gttcatgtca
      661 aaaattagag atctgcccag taacttgtgc
//
LOCUS       KCPA01003182             595 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 350418tic ultra-conserved element locus
            uce-6137, sequence.
ACCESSION   KCPA01003182
VERSION     KCPA01003182.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 595)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 595)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="350418tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>595
                     /note="ultra-conserved element locus uce-6137"
BASE COUNT          168 a          140 c          133 g          154 t
ORIGIN      
        1 ctccagctgc cttcggcatc tcttaataac ttggcatatt cacttaatac aggccggctc
       61 cttccaagtc attagcggcg gcagccggaa cgctgacctg gtttgcttgc caagacagag
      121 caaagagaaa ccttcacata atcatttcca aacattaaaa tggctccatt gtcattatag
      181 ctgagagatt gaattcgcct catcaaagcg gcatatgaca ggtgactcaa taggctggtg
      241 ccaagcgcgg aggcaggaga ttagcagggc actgatatca ttatttccgc ctatcacaga
      301 ttcggcaggg aggcaattgt aatttctggg cttattagtc tgcattcgca ggaaaaaacc
      361 tggtgataaa cctcagtgtg acagccaggc atttgtgcag caagtgctgt cacagtgaca
      421 cttggaaaat gccaatgtgg atacgttttc ctaatccccc ctaatggagg ttaaagcctg
      481 gcacaaaggc actcttatca ctgatcggga cactaataac atttgcattt ttaagttaaa
      541 tatagtaagt aaagagtaag tctcctcctc gcggcttcgg caattaactc agcct
//
LOCUS       KCPA01003183             747 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 350531tic ultra-conserved element locus
            uce-812, sequence.
ACCESSION   KCPA01003183
VERSION     KCPA01003183.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 747)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 747)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..747
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="350531tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>747
                     /note="ultra-conserved element locus uce-812"
BASE COUNT          233 a          138 c          132 g          244 t
ORIGIN      
        1 gggttctgat tgcttgtgaa tttctgtacc tgcacgtaca atgtagcacc atttgaatag
       61 gcatttcctg atgaaaacaa gaaatacacc atggagcatc taatctcaaa ggttcctctt
      121 agctgtactg tgatagaccc aagaccttgc aatgcaatta ccatagcatc gtcttgatgt
      181 ataggcttga cacagtaaag tagggtacac aagcaccatg tggctcaaat tctgaatttt
      241 atttgcctat cggttgagct acatgctcgc ttcattgagc atgacaacct agttttaagt
      301 gtcatttaat tttcattttg aaatataatt acaaagtgtt cactgtaaga tatcactcgt
      361 ctgcaaatgt gtcaagatta atttgtgcta gcttattcac aagtgtcaat agttaattac
      421 tgtgtcatct ctagatggct aaatgacatt ctaacttctg attttttaca gtgttccttt
      481 atgttatttt ccattagggg atgagtctat attcctacat gtgggcaaat acccaagcac
      541 ataaaatacc agacgtcaca actcattaaa atcaacagag catacattgc tgtatatatc
      601 ctataaaata tatttaactg aaaagataat tctagtaata atgtcagatt cctaaaaacc
      661 acacattaat ttggatctgt ctgatctaat gcctagtgga ctagtgcatg gaatcattgt
      721 tgtgagaaga ggacagctcg ttggaca
//
LOCUS       KCPA01003184             711 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 350642tic ultra-conserved element locus
            uce-5394, sequence.
ACCESSION   KCPA01003184
VERSION     KCPA01003184.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 711)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 711)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..711
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="350642tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>711
                     /note="ultra-conserved element locus uce-5394"
BASE COUNT          199 a          175 c          149 g          188 t
ORIGIN      
        1 atgtctggta aagccctcct agctgaatag gacatggtag gaccatcact aaagcagaaa
       61 tacatgagaa atactgagaa aaaatacagg agtttgttgc aaaagcaaat gtggggctcc
      121 ttttttcctt cccacaagtc ctgtttgtaa ggatcctctt cagactccca agcatgttga
      181 accacaccat ccccctgcac cctccctcct ccgctgtaga tatacaaggc taagttgatg
      241 agctgttcag cttagtgtga aatgtgttac attttccccc cagctgcttc ctgattgcag
      301 tatttacttt taatctcctc tgcctcaatg cccgataaaa actttgtcac attagatggt
      361 gacagatggg aaagagaagg gggggatcac tgcaagggaa cgtcctggct tcccaataat
      421 ttttcacaac gccaattatg tccttcagtg cttcccggca tgtgcaccca tgtcagcaga
      481 gaaggaaata gaaaggcata aataaagaca aaaccaggca ctgcgtggct ttaataacat
      541 ttctcatttg ggtgaaatat tgttggattc tctcctgtgc tggaaaacac acacacacac
      601 agacacacag atgtgcagag ttcacagctg ctttcctcat gcgtgggcac tgccatcctc
      661 acaagcagct cgcattgtga tcagcgtgca gatgtttcct gctttctgaa a
//
LOCUS       KCPA01003185             841 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 350753tic ultra-conserved element locus
            uce-6879, sequence.
ACCESSION   KCPA01003185
VERSION     KCPA01003185.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 841)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 841)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..841
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="350753tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>841
                     /note="ultra-conserved element locus uce-6879"
BASE COUNT          274 a          127 c          169 g          271 t
ORIGIN      
        1 taattgctat gctggattct ttttgaatca agctgggttt ctaccaagca gtagtttgct
       61 gtatgtttgt atgcgtgcaa atgtgtgtaa tgtatataca catgaagtgt atatttagta
      121 agaggatatg aataactgct gtgtcatgta aatacagata attgcagtct ctcaaggaaa
      181 agtttgcagt agtgtttgca gatattatat atattcctac ttgtgtctga ggagtaaaga
      241 aattcctctg ctgaatagct gttagtatct attttacaag atttactcat tttcaggtac
      301 ctaatgtagc tgctagcatg catgcacgac aatacaattt atatggtaaa tggaaccaaa
      361 taatggcttc actgaatgtt atggctgcac tgaagggaaa tgtcacggta aatagctgcc
      421 aaattatgga tcatgccgaa gtgtcacaac tgcactaaag acaaatagca ctagaggcta
      481 ttgccactgt gacgcttttg agttatgaag aagaggagca gcctgatgtg agcctctttg
      541 tgtcctcatt atagcaaagg gttactggtg cagtgtacaa gaaaacctag tcctatgtgg
      601 tggctagtta ttaatctgtt ctttttgaat caacagctgt agcaaaccag aaaatctttt
      661 ccttgcttta tgaatacata taaacacata caaacaaaga aaaacctgca ggttttatga
      721 atgtaaatgt gtacaggaaa tgactagtaa tggaaaaatg ttgtaataaa ataatctaat
      781 caaagaatat tattaaatct aatatcatat gtgtctgaaa gctttagttg cttcttatgc
      841 a
//
LOCUS       KCPA01003186             780 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 350866tic ultra-conserved element locus
            uce-1606, sequence.
ACCESSION   KCPA01003186
VERSION     KCPA01003186.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 780)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 780)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..780
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="350866tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>780
                     /note="ultra-conserved element locus uce-1606"
BASE COUNT          258 a          162 c          155 g          205 t
ORIGIN      
        1 aacatgtgcc agtcaatatt ggtacactgt gacccttgac gcctcctaag caaaactatt
       61 aagtccaaca ttttctcctg taagcactta tctgtaagga tggctaacat gtcctctaaa
      121 gcagatattg aaactgattg gacaataggt agataccaga caggggcctg ggggccgacc
      181 tctagaaata gggggagaaa atcttaatct gcaacacaat gcagctctct tgaaacccta
      241 tcattttcac ttcccatgtg tctgctgcct gactgtgaat ggatttgaaa aggaatggtt
      301 agtgctgaaa attggatcag agctaacatt ctctcatttt tatcagcagc tgccaaaggt
      361 catctgacat aatagctgat gaattcaagc ccagtggatt tcatttgcaa ttttcaattt
      421 actgaggcct ccaaacccca cagtgataaa agcttcccct atcgtggcct gtcacaaaca
      481 tcaagaaact gcacaaaccc acaagaaaga aataggagaa agctgtgcat catcacagtt
      541 acagataagg agaacaggaa gaaacagtat catgtagaaa ggtgtggagc ggcatgtgtg
      601 gttgagtttc taaatgccaa ttgtaatgaa aagactatga agagcaatca aataacttct
      661 acagaataac atcatggttc ccctccctca gtttcaaaat tgccttctaa tctcttgctt
      721 gacatcctga agataaaagt gaaagtgaaa aaaccctgtt tatttagaca tggaaagtat
//
LOCUS       KCPA01003187             616 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 350974tic ultra-conserved element locus
            uce-7620, sequence.
ACCESSION   KCPA01003187
VERSION     KCPA01003187.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 616)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 616)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="350974tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>616
                     /note="ultra-conserved element locus uce-7620"
BASE COUNT          193 a          110 c          122 g          191 t
ORIGIN      
        1 ttcattattg actgcctgaa gcatcacacc tctctcacct ttgctggaat gtctgaacat
       61 tagggtaaac aacacgccgc tgtcttatca taatgccgtt tgcttcactg cagcaagaac
      121 ttgtcagaaa cagattgtga tgttgacttc tcaatagggc ctaaattaga cttctataaa
      181 aagaatattg catatttatt tccacaataa cgccgaggaa aaacgttagt caagaagcaa
      241 gcaattgggt gaataaataa gcttgtcttt gttctcatca attaagttat tacatcagtt
      301 ggaaaaccag tgaattataa tacagatgtt taatgaaaca ctgctgtgcc tataagtcaa
      361 actcctattt tgtggtgtga ttttggctgc atagttttgt gtgtgttaaa ccgtatttat
      421 tagctgatac ccattattat tttgagcaag gtataattca gttgtcaggc tccagctctg
      481 ggaaggagat ttaatcagtg agagcccgct ttgctgctga gcataaaaca atgcgggttt
      541 catgaagcaa tcacaccagt gtgaaaaaat gggattaatt agtattgtac aagaacaggc
      601 agcatgctca ttaaaa
//
LOCUS       KCPA01003188             532 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 351081tic ultra-conserved element locus
            uce-6486, sequence.
ACCESSION   KCPA01003188
VERSION     KCPA01003188.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 532)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 532)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="351081tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>532
                     /note="ultra-conserved element locus uce-6486"
BASE COUNT          167 a          100 c           89 g          176 t
ORIGIN      
        1 atatttcatt acataagaga ggcagctata aaacctattt ggtggtcttt caatcactgc
       61 tacctgtggc ccatttatgt ggatgacatt catcagtatg gcaggaaata ttaaacaagt
      121 gctagacagt tattagctct cctcaagcag aagtcctcat accctctatt catataccat
      181 gggaaaaatt cacttggtat tttcgttctt gcaactgttc tgctgttcat aatttgatgg
      241 aaaattgatt aatcacacat ttaactcaat gcaagatctt ctgcactgta ataaattatg
      301 gccattaatc aataagtaca aagtaattcc aggagtctgg agacatgctg atttctaata
      361 gaaaaacttg tgcttaggcc ttcttgccag tgaccacttc atctgaggta ttttgcacct
      421 gcctcaatcc aattagatga cataattaat gaatctcagt gcagttgata atttgttata
      481 caaaagaaag aatgttttgg cacatctatt aagtcctgat gtacaaatct tt
//
LOCUS       KCPA01003189             678 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 351194tic ultra-conserved element locus
            uce-5880, sequence.
ACCESSION   KCPA01003189
VERSION     KCPA01003189.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 678)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 678)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..678
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="351194tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>678
                     /note="ultra-conserved element locus uce-5880"
BASE COUNT          232 a          134 c          126 g          186 t
ORIGIN      
        1 agagcaagta aaagcaggag agagacagag ggagcgagag gtaagaaact cataatggga
       61 tttttcatgt ggaacgatca ttttatctaa tacgtctgaa aatgtaatcc attactacta
      121 attaccatgc tggcattgaa atacaggatc acacttactc cagatccaga tagaggccca
      181 aatctctcca ttcattgttc tttccatccc acctcgcctc cctcccttcc aagaagaaat
      241 tcagcccttc ggacattagt gaagaagggc ccgaggtctc cctatcatcc taaagcagaa
      301 gctaaacaat attagccaat catttttgat agatgaagca tggaaattag ttccagagtt
      361 taactgataa ctgaaaccac acagttacat tccattatgg cagccttaat tgatgagctc
      421 attaagccca ttattagaga aattgatttc aaataggcac ttaaaactgg ctggcaaaag
      481 aaaaaggtga agagataccg tacaatgtga agaaagtaac taaaatacat aatgaagcaa
      541 gtaattttat aggtttgttt aatgaaagcc tcaagagcat attagttgct gtgtggattt
      601 taaacactca ttttatgtac taataaagct cccgtccatt atgggagttc tgaatgcctc
      661 caatctttaa tgcagctc
//
LOCUS       KCPA01003190             683 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 351301tic ultra-conserved element locus
            uce-914, sequence.
ACCESSION   KCPA01003190
VERSION     KCPA01003190.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 683)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 683)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..683
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="351301tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>683
                     /note="ultra-conserved element locus uce-914"
BASE COUNT          234 a          109 c          133 g          207 t
ORIGIN      
        1 ggattgtgat ggtttcacat ttgttcaggt ctccaaggac ccgcaccaat aaatgtgaaa
       61 gagacaacag cagaatggca tagtttccca tttccaccag gatgatactc taaattaagt
      121 ctaaccttaa atgtataatc tgtccttgaa aggatatagc atcttcgagc tcttggcatc
      181 ccttacgaga aaaaattggt tctaagggtc tctgatcttg tgttttagta aaatagaact
      241 gcacggctga ctgacagttc tgatctaaag catttacgtt taagttttga tctctctgct
      301 tttgattaaa actaatgagc tcatttaatt caaaatggga atctctgata agagaaataa
      361 ggttgatgtg attggattag aggggcaaat taaactctta gagcagaagt ttgtgcttat
      421 acagtgtatt aaaaagctgt tggcgtatta tggtgtgtta gatgatgaga aaaatttcat
      481 agtaattcat atttaatcag aagaaatgaa agtactaaat ataacatggc tctgcttttc
      541 cctcgagtga taaagagctg tacatttaaa atgacatcga attcatgctc tctaaaacaa
      601 tcataagaga cacactaaag aaaggggcac tgttgtcagt tatcacaata gagctaaaat
      661 gtcacaaaca caaaacaagt tga
//
LOCUS       KCPA01003191             587 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 351411tic ultra-conserved element locus
            uce-1820, sequence.
ACCESSION   KCPA01003191
VERSION     KCPA01003191.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 587)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 587)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..587
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="351411tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>587
                     /note="ultra-conserved element locus uce-1820"
BASE COUNT          193 a           93 c          126 g          175 t
ORIGIN      
        1 tgcagaagct ttctaaatta acaggaaaca caatgaagga ggaagtgatg taaacaagat
       61 accattttgt cactctgaat ttaaaatgca gtggactgct gagttactgt cactcaatac
      121 agtgggcaga ataacagagc ataagagtac aacctttttg gctaaggtca aataattgtg
      181 attttctaca gttaatgaaa gtttaatacc ctgtttcatt aaaaattctc agaacgttga
      241 acataagtca acattccatg gagaagaagg tattatgcag tttgcatgtg tgcatatctg
      301 catatcggag cacaaaatat tgacatgata attgcagtca agcctgattg agcagtggcc
      361 tctgggaatt cagctggtgt tgtaccaact ggatggctgc tcaggacaca gtttgaaatg
      421 caaggtgcaa gttagcactt tattcagcac aggcaggcat catttaaaaa tccttaaacc
      481 ctggtgatgt gcagatgtta aagcagtctg ttctgaagtg ctgataaaaa gactaggtat
      541 tttagatgaa aaatgtttgc aaaatttttt ttgtactact ttagtgt
//
LOCUS       KCPA01003192             497 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 351517tic ultra-conserved element locus
            uce-5912, sequence.
ACCESSION   KCPA01003192
VERSION     KCPA01003192.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 497)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 497)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="351517tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>497
                     /note="ultra-conserved element locus uce-5912"
BASE COUNT          163 a           95 c          103 g          136 t
ORIGIN      
        1 taattctaga aacttttgca atcattgatg ctaatatttg gaatgtttca gaaggtatta
       61 tcatctgcca gtagcatgtg aagaagaaat agatctcgca cttctagtaa tgaaagcatg
      121 tagtacttgc cattcttttt aacagacttt ttctatttaa taaaaatgca gctggaacag
      181 ctccaccaaa cttctcacaa cgactacaga gcatgactgc aagacaggga agtcaagttc
      241 gacttgatgt gagagtgact ggaatcccta cacctgtggt gaagttctat cgggatggag
      301 tagaaattaa aagttccccc gattttaaaa ttttgcaaga aggagacctt tacagcttaa
      361 taattgcaga agcatatcct gaagactccg gcacctattc cgtaaatgcc acaaatagca
      421 tgggacgggc tacttcaaca gctgaattgc tagttcaagg taacgaaaac cagagtggta
      481 gtggtgcaat atgcaac
//
LOCUS       KCPA01003193             688 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 351624tic ultra-conserved element locus
            uce-1438, sequence.
ACCESSION   KCPA01003193
VERSION     KCPA01003193.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 688)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 688)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..688
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="351624tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>688
                     /note="ultra-conserved element locus uce-1438"
BASE COUNT          223 a           81 c          126 g          258 t
ORIGIN      
        1 agattgatct tcgatcgtta gtgttctgtt gttcactcat ttgaattcag ttctaaagga
       61 attctggtac gtggtgaagc agtaaatgaa cgaattgtat ttttgtggtg ctttttatta
      121 atcatatggg ctcaagtcca gcaaagtatt gtgaatgtgc atgactttaa acatgttttc
      181 attattttgc tggatcagca ttgtgatttc aatgttattt aatactgaaa acaaatttta
      241 aactggcaat taagaaaact atgttcattt tgaagatttt ggtataattt atctgttaga
      301 gtagggaggc cttacagact gacttcactt aaagaggatg tgtcacttat tgtcagcgtg
      361 gtatggactt tatttgctta aataccttca tttgtaaagt atgtctcact tgaaattgct
      421 ttgtatacat tttgtaaaaa tatttataaa atgttttgta aaaaaaaaag tataacaaat
      481 tgcagtttat tttgttatgt tggataaata ctgttaaaga cacaagtcag taaatatatt
      541 gttaatccat ggataggaaa tgtttagttg gagattacaa attgaaacaa ccattgcaat
      601 acagccaaag atttgggaaa aaatgtctat ctgtgattta accaggttga atatttacat
      661 ttccaaaaga tgattggtct cagtttta
//
LOCUS       KCPA01003194             424 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 351726tic ultra-conserved element locus
            uce-3782, sequence.
ACCESSION   KCPA01003194
VERSION     KCPA01003194.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 424)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 424)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="351726tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>424
                     /note="ultra-conserved element locus uce-3782"
BASE COUNT          141 a           51 c          103 g          129 t
ORIGIN      
        1 gttgccagat gtacaaaatg gctaatgtgt tgtataaaat gattctgggt ggcagaaact
       61 ggataggaag ccaagaatac tgcactaaca tttgagcttt tctgcgagag gcgttgccag
      121 cctcgggagg gagcactgga taatttatag gttaacattt tctttttatg tgaatagcat
      181 tttttctcat ttatagttaa ttaggttaag catgcatggg gagtgaggga ggaaagactt
      241 tcagagagaa tctaaacgat tagtaatttg aatgaagtaa aagaatctgc taaaggatgt
      301 agctctggaa ttaaatatgt tgctataaca agtgtaagta tcagatagga attttaaagg
      361 ttcttacatt aattatagca gcagcataaa aagaggtaga gcatatttac aggtttggca
      421 catg
//
LOCUS       KCPA01003195             442 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 351832tic ultra-conserved element locus
            uce-915, sequence.
ACCESSION   KCPA01003195
VERSION     KCPA01003195.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 442)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 442)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..442
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="351832tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>442
                     /note="ultra-conserved element locus uce-915"
BASE COUNT          163 a           70 c           76 g          133 t
ORIGIN      
        1 caacaagagt ttctagcaca tcatgtgatc aatagataga agtaccttta ttttttaaat
       61 tagtctaagg ctattttcct tttactgttg tataaacagg gaattgaagg gtaaaatagt
      121 taaaacttaa tgctatagtg ctaatgtggc ttttaaatca cgtcagcagc aatcactgca
      181 ttataattaa caatttattg aaccagcaat aaaatgaaca tcacattact tcttaaagca
      241 gcagaataaa atggctaata aatagcataa gccagacaaa ttgcagagta atagttaaga
      301 tttatagtgt gcagaaagat ggatgtgcta ttagtaggag ctccaatact tgacaaaatt
      361 cagacacagt taccaggcat gtcagagttc acaagtctaa gtggtttatc caaatttcag
      421 ctcactggga aatactcatt ac
//
LOCUS       KCPA01003196             649 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 351939tic ultra-conserved element locus
            uce-6393, sequence.
ACCESSION   KCPA01003196
VERSION     KCPA01003196.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 649)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 649)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..649
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="351939tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>649
                     /note="ultra-conserved element locus uce-6393"
BASE COUNT          136 a          153 c          155 g          205 t
ORIGIN      
        1 tttctttgtg ggtaaatgag cctcaagtcc ccgtggggga ggcacagtgc actggggatg
       61 cttggctctc tgcaggggat ggagggaagc accgggtgat gctctggccc acaccaggag
      121 tgcatccgcc ccggagctgc tccgatgttt ggtggtcttt aatttggcat tacatacccg
      181 gggcttgtct gcagctcgta tgattcaaag ttctccatgg ggtctaatgt acaaggcctg
      241 gcctgttttc attaggtttc ctgagctctc ctcccttctc cccagtgttg ccgcacaaag
      301 acacttttgt caggcaatgt tggactctcc tcaaaatcca agcactttca ggaaaggact
      361 tggaagtcta tcttctcagt ttccatatcc ctttgccctc tgctctggca tttggtttga
      421 ttggttgtag agttgtgttg atctgtctgt gctggagtct atcttgcgtg tattgcaaat
      481 tgtgcaagcc agctctctga attattgcac attgtaaagt attaactcct tcagccccca
      541 tttaagtgct gggaccaaaa tcatgatagg aatgttaaag gagtattatt atattttatg
      601 ttcactgcca caagtttagt aagaaattta atccccctct cttgctcac
//
LOCUS       KCPA01003197             606 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 352048tic ultra-conserved element locus
            uce-4872, sequence.
ACCESSION   KCPA01003197
VERSION     KCPA01003197.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 606)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 606)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="352048tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>606
                     /note="ultra-conserved element locus uce-4872"
BASE COUNT          178 a          108 c          102 g          218 t
ORIGIN      
        1 acatttggga catttaacgt atcaagctca aataaaaatg acacgcagat cattcacttc
       61 tgaagctgcc ttgtgttcag ttattggaac actccatctc tgtggtttcc taaatattat
      121 aagtatatat tccaggttaa actttctatt ttcctcaagg tagtgttgct tttcagttct
      181 caatggcttg gtttttacct aaagaatcag gtcctatcag caaaatcaaa ggcgattaca
      241 cagctcagta gtcatttagg atttctgtgg ctcaattaag catgtatagc atgccacagc
      301 cactgagact ctgtttattc agtgcaagtg ctctgtaatt tatttaaaat aatccatctt
      361 taacaaataa agaggccatt gactggccat tgctgcaggc atccatttca atgctgcctt
      421 cttgatggtc tgttttgctg gtttaagtta aatacctgac aaaagtgatt cagtttttgg
      481 gaaataagat ttgtatgcat aatgtttatt ttatttttca ccagtaatca attaaaacat
      541 ctttttaaca gattgaccat taaaaatgat taatgctttt gagtctgata gccacagttt
      601 ttgatt
//
LOCUS       KCPA01003198             777 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 352157tic ultra-conserved element locus
            uce-301, sequence.
ACCESSION   KCPA01003198
VERSION     KCPA01003198.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 777)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 777)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..777
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="352157tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>777
                     /note="ultra-conserved element locus uce-301"
BASE COUNT          245 a          123 c          142 g          267 t
ORIGIN      
        1 ttcacacaaa tatcattaag ctgctagtag ctgaaaatct tgtgtgtgag aacagaagat
       61 accccatcag tgaaggcatt tttgtttaat aacaactttg atccttctac tgttggcaat
      121 ggtcattgag aaatcctgac ataaagaagg tatctgcaag ataaagttct acaagggatg
      181 attagcagca cttaagtttt ctttctgttg aaaggaagaa tccctgattg aacagtgcat
      241 tgaatgatat gacaagcaag tacttgatcc ctgtccagct ggaaaggaat tgtattcatc
      301 agcagctttt tagctaagga tgtctttata ttttcactct ttgtttgagt ctctccagat
      361 cctcccttta cttcatgtca gcactatata gtaggtatgc caagtggttt tgaaatttaa
      421 attacagtct ctttttcaga tgttattgga aagaacatgt aatttataac cacgtgttag
      481 gagtacagga tgttcatggt tcactgccaa ttcttctttt gtaaagttaa taaaactttc
      541 ataaaacact tatacacttg tatatttcat ggtaaagatt atctcatagg ctaatgtaaa
      601 gatttattaa aaatgttttt ttgttaagag gagtgtcaat agtttgcagc tgagtgtaat
      661 tttgaattcc cagtagatga cagtctgact gaaaatgaca ctaacagctt tgttgattta
      721 gcactaaaaa taaaggattc tttcaaatga tataaagctc taataccctg agtgtgc
//
LOCUS       KCPA01003199             468 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 352263tic ultra-conserved element locus
            uce-2414, sequence.
ACCESSION   KCPA01003199
VERSION     KCPA01003199.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 468)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 468)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="352263tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>468
                     /note="ultra-conserved element locus uce-2414"
BASE COUNT          156 a           65 c           79 g          168 t
ORIGIN      
        1 tttgaaacgt ttttataaca tccattttac tgtaaataat tcattaaaat gtcttgctaa
       61 gtcttaggca agtggatttt tgaaggttgc tcattttact tatccaccca aagtcaattt
      121 gagtatgaat atataacatt ttactcataa tagcaaacaa cttcagagaa gagacattta
      181 ttctggaggc agagattcaa actagacagc aatgatgcat tacaaatata taattatttg
      241 cactaatatt tgagcaggtg gaatggatta gtacatggtc aacattgcgc tgctgataac
      301 atgtattttt ctatattaat atgtactgtg caacatgtat taaaattgtc aataattcat
      361 tttaacagag atagcaatat ttatattgct gtgttctaca gacagcagag tgaattgtta
      421 aaaagctggg ctagatttac ttgtttccca gcatgtgtgg ttttaatt
//
LOCUS       KCPA01003200             481 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 352367tic ultra-conserved element locus
            uce-6315, sequence.
ACCESSION   KCPA01003200
VERSION     KCPA01003200.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 481)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 481)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="352367tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>481
                     /note="ultra-conserved element locus uce-6315"
BASE COUNT          164 a           84 c           93 g          140 t
ORIGIN      
        1 aggtattaaa ccctctgggg aatgcaggca cagaggtaat aaacatattt gtttcattac
       61 aacatcttaa aaaatgtaaa aattctaaaa aaccaactgt aagctgacct gcagccaaag
      121 tacacattaa ttatacagct taagtcaggc ggatgctcaa ggaaaagaga tataatgtta
      181 cacccagctg gatactttgt agttagcaca aatgtaatat aaagcgtacc agagtttgtc
      241 aagtgtctgt ctggattttc agttttcatt agtactataa ttaaaaccac attttcagct
      301 atattaccta taacaagaaa ggaatgagaa atgaggttgt caaggtcatt ctctttctgc
      361 tctttatcct gagtatctgc aggccacaag ctgttgaatt tggtgtaaac cagagtaata
      421 ggatggaatg tcacgttacg aacctttgtg gttgcaaaga caaactgatg aggtcacttc
      481 c
//
LOCUS       KCPA01003201             396 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 352478tic ultra-conserved element locus
            uce-7045, sequence.
ACCESSION   KCPA01003201
VERSION     KCPA01003201.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 396)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 396)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="352478tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>396
                     /note="ultra-conserved element locus uce-7045"
BASE COUNT          127 a           87 c           66 g          116 t
ORIGIN      
        1 aattacaatt ctctgctttg attgaaatgc acctatgaaa tccatagttt aaaattctta
       61 tcattataca gttaaaaaca tccacaattt tatttattgg ctgctaacac tacctggaca
      121 gagggcagtg ttattgcaaa cccttgattc tcttaaaggg ccgctgcagt gtgtcccgta
      181 aggtgataca caagttctgg ttcgcacctg cgacccttga ccacaagtaa ctgaacacgt
      241 actccactgg gcccactctt caacaccaga ttcacctgta ttcaagacat gaatatggac
      301 ataagtatta atgacacact gaacctcatt atcatctgct cttacaaata aatatttaaa
      361 ggtttatgga gaaaagcagc tgtgaaaatg tgcaat
//
LOCUS       KCPA01003202             416 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 352590tic ultra-conserved element locus
            uce-4020, sequence.
ACCESSION   KCPA01003202
VERSION     KCPA01003202.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 416)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 416)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="352590tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>416
                     /note="ultra-conserved element locus uce-4020"
BASE COUNT          138 a           82 c           88 g          108 t
ORIGIN      
        1 gagagtggag caagacctcc agaaaataaa cagggtgtac agtttcaaag gctacagaca
       61 cagacatttc attgttcaag ccaattatca gtggaaaata ataacaacag atggattcag
      121 agtcactgac ttttcatatg cacttcatct ctgcacaaca gatgatgaaa tgcgagagct
      181 atctcggaaa ggcaaaacat ctttcagtaa aagaactcta tactccagat ggggaccttc
      241 taaggcagct gattatcttc ttatagtgtt gtaagataga cttactaaaa catttccaga
      301 actgatcaga ttggatgagc acaatggcag cattatgagg agtaagttgc tcaggtctca
      361 gacttgtgac tggactactc agagatttcc atggggtcat tccccatcaa gtactg
//
LOCUS       KCPA01003203             602 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 352700tic ultra-conserved element locus
            uce-1265, sequence.
ACCESSION   KCPA01003203
VERSION     KCPA01003203.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 602)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 602)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..602
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="352700tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>602
                     /note="ultra-conserved element locus uce-1265"
BASE COUNT          202 a          106 c          101 g          193 t
ORIGIN      
        1 caaaatttaa attgtcttcc gagcatatcc gatcacattt acatttagtg tccaaaacaa
       61 gttgattgac accagtgcca gcactacaac gtcatacagc aacttcatgg tattctttga
      121 cagttctctc tgttccaccg aaaattacaa aaggttctgc agagctttcc ttagcaagct
      181 gaagcttact agtcatttgt ggatgcgcat aaaagctgct tatagcacag ctatggcgta
      241 agctattttc taagcaataa atggttcaag tcatctattt tgtcctgaaa tgctacctgt
      301 agttacagca ttgcttataa atggtcatag taaattcagc atcaaagaga atattacaga
      361 aaaagacagc agcagaagca ttagcattat ctagtattta tatatgttat caacataaca
      421 cagcagtaaa aggtttaaat gcatattaat gggtaccgtg tctaaaaatt actaaagtac
      481 ctatttagtg tattggatat ttttctcaag gagtgcttgc tgtgtctaaa cagcataatt
      541 agatatgtga cttagtacag ttaattccta ttgattaaat aacttattta tgtaccaaag
      601 ga
//
LOCUS       KCPA01003204             760 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 352808tic ultra-conserved element locus
            uce-2120, sequence.
ACCESSION   KCPA01003204
VERSION     KCPA01003204.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 760)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 760)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..760
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="352808tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>760
                     /note="ultra-conserved element locus uce-2120"
BASE COUNT          231 a          120 c          157 g          252 t
ORIGIN      
        1 atatatcaca tgctacataa caaaagggag ggcagaagtt agaactgtaa cttcttttac
       61 attactggtc ttgcttttac tgtaagagct gtttaaaata atttcaaacg ttagagtaaa
      121 tctctagtaa atatttaaac tatgtataac tagtcacaaa taaattaagc tgattttatg
      181 cattctctct aattagaagg gcacagcatt tgttgaaacg tgattagtat tattcattaa
      241 gcaaaaaatt ctcatttgta tcttattatc actattctgc ataaaccaac acaatttgtc
      301 atgaactccc tcatttgctg tatcctcaaa tagcagatta tgcttatttt tcatttggac
      361 agtggaaaat aaagccaggt gtttggcagc accagagtgt tcaggtgtaa ctgtgccagt
      421 gatggtacat tactagcagc gtggatgaag aatgaggcat ggagaatctt gggactgagg
      481 tgccttgagg cccatccctt tagagtggtc ctgctgatga gacaggtggt gttgcatagg
      541 actgtttttg taaagtcagc ctttcacctt caagtggaaa tgagaggtgt aatacttaga
      601 tgtgtttgtg actaaagtct ctatggtttt gtattaaagt tttctaaagg ttaaaaatgt
      661 ctgttgctgc acagagatct ctgtcactga aaagaatcgg cgcaatattg caggggcagt
      721 actgtgtatt tatatacata aatatttaca tgtgaccttg
//
LOCUS       KCPA01003205             536 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 352918tic ultra-conserved element locus
            uce-4940, sequence.
ACCESSION   KCPA01003205
VERSION     KCPA01003205.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 536)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 536)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="352918tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>536
                     /note="ultra-conserved element locus uce-4940"
BASE COUNT          165 a           91 c          105 g          175 t
ORIGIN      
        1 acccttaagc cagtcagtgt ctgaagaaga aaagttttac tttcttctgg ttttcacttt
       61 gggtcccttc cccagcagaa gaggcaagag ggttcaccct ggctggtgga gtcagctgct
      121 gacaatacat taaaaattcc ttttaatatt ctgcttagac acactgtaaa agaagaatgg
      181 atatcccgaa taattaaaat atgtttaatt tgcatggagc tcagggcatt gttctgacat
      241 caaacatcac tgtcaaccat atgtggaatt tcaactgcca agtgcttcat ttatgtgaaa
      301 attagcttaa gtgtacaaag aatgaaaaat ttatgattat ttcacatttt aataaatgca
      361 gtgctatgca ttaatttaga cttctgaaac aattttgaca gtgacaaggg aatccttctc
      421 agactaagtg ctgcagcgtg ccgtgtttca catgtcctgc ggaattatgt ggtggagtgt
      481 taaggcagtt agatttttat gtttttaaac aaagatatta tatgagtata tcactt
//
LOCUS       KCPA01003206             705 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 353025tic ultra-conserved element locus
            uce-576, sequence.
ACCESSION   KCPA01003206
VERSION     KCPA01003206.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 705)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 705)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="353025tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>705
                     /note="ultra-conserved element locus uce-576"
BASE COUNT          258 a          110 c          130 g          207 t
ORIGIN      
        1 tagttactct gggcttagta ttttatttct gtgagaaaat gtatcaaaag ccaacagtag
       61 aatagaagga gaaaaaaaag ggaaaaatgt gtagaggcat acaagaaaga gcttgtggca
      121 tatgcatgag cataaaacat caagaaaaag ttaaattaat gaaggtagtt cacagtttaa
      181 aattaattat ttttgcattt ctttttctca aaggttcctc ttcagtattc caaatataaa
      241 tggtggtggg attatttaga aaccaagtac attataacta aggcctatag caacctcact
      301 cagcagtgaa atttgttgtc tccctctgat cctcagatta tggagatgag gggatgaatg
      361 tgcatcagta agattcccta ccgagatagt ttttcactct tttcagtaag aaaaagatca
      421 aagggaaaat agctaattaa cataccaaag gagacaaaac ccctagagct ttatcgttgt
      481 tgcaatccaa taataaacag ccaagtacaa aaaagattat ttgatagtga cacacagaat
      541 tgaaagcctt tgaaatgtca gcttctcaaa aaaaatattt ttggaaggaa tatccataat
      601 tatacagaat aatgcttaag cattggagag taactcttca ctcctttgag agcttgcttg
      661 taaaactact gtgcttaaga acaacagctt gggttgcctt tatct
//
LOCUS       KCPA01003207             370 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 353134tic ultra-conserved element locus
            uce-1017, sequence.
ACCESSION   KCPA01003207
VERSION     KCPA01003207.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 370)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 370)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="353134tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>370
                     /note="ultra-conserved element locus uce-1017"
BASE COUNT           91 a          110 c          105 g           64 t
ORIGIN      
        1 catcacaagg aaaataaacc caaggtacaa acaacgtgcc ctcgcctccc gttccgtccg
       61 gggcaggggc tcaaggtcac gccggggatg cggagagggg cgcggggctg ccccgtcccg
      121 gggctggcgg aggaggcgag tgtggaagtt tatgagctca tcaggatggt tgtaccatta
      181 catcagaggc aattataaat ggccaagagc aggggatggg gagccaatca gatcacagat
      241 gggatgtcaa cctaagacca actgtctcct ggctttgaca gaaggatttt acctccataa
      301 ttcaaatccc aaacccaagc gatccgcact cgctgctccc atcgcccagc tccccgccag
      361 cgctcccgcc
//
LOCUS       KCPA01003208             461 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 353242tic ultra-conserved element locus
            uce-5619, sequence.
ACCESSION   KCPA01003208
VERSION     KCPA01003208.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 461)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 461)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="353242tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>461
                     /note="ultra-conserved element locus uce-5619"
BASE COUNT          141 a           97 c           85 g          138 t
ORIGIN      
        1 gaaataaaaa cagatttaac ctacagacct ttggttaact tcttccaaaa ctaaatataa
       61 aatgttacct catcttgctc agattaaaag gggagactcc ccccttcacc acgttccctt
      121 attgagaatc tcttccgaag agtctgcata taaaagacaa tccagagaca tctttgaagg
      181 ttctctttca aagcatctct acttccctga gcgtctgggg atttctgtta ttaattgaag
      241 ttaattttct aggatatcag tttgccatgc acgtgggaaa gattgatagc ctcttcgatt
      301 ctcaagagtg ttggaaatga cactgttcca tcaccgggtg tcttcacttt tatcatcaca
      361 aatcaaatta taaacatcgg ggcaaccttg ctggaatctg gcttcgggag atttccataa
      421 gattaattag gcggccaaag caaagatggt aaaatctaag g
//
LOCUS       KCPA01003209             545 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 353348tic ultra-conserved element locus
            uce-6362, sequence.
ACCESSION   KCPA01003209
VERSION     KCPA01003209.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 545)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 545)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..545
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="353348tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>545
                     /note="ultra-conserved element locus uce-6362"
BASE COUNT          145 a          104 c          106 g          190 t
ORIGIN      
        1 tttctctttg gtgagtagct gtttgtctca ctttatttac ttggtattgg gtatttgtca
       61 atgtcgtttc atatctgcag aaaattcata cgttctatgg aagtatgtat gtgtgtgagt
      121 gtgctgaagg tcacatgact atttcatcct atttggtgga gcagcttgac ttttttccct
      181 tgcttttggt gatggttgtg agtgcagaag ttgattgaca gatgcatgcc agaaaccccc
      241 attctccttt tcaaagacta catatgatgg attgcgatct ttcagctcag caggacacag
      301 ggaccatgca agctgtaatt ggtcaggtat ggagtcagcc atttctcaac tcccctttta
      361 tttttttttt tcacaagggt ctaaccatat gattcacata attcatattt acagtaccat
      421 ctttctatct gtatcttcag ctaccagcaa gtgtagtact gaaagtgaga aaggcaaaag
      481 aaacacaata atctggccag ggaatcacta gaaaaaccta aattaccatc ctttttttct
      541 aataa
//
LOCUS       KCPA01003210             686 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 353456tic ultra-conserved element locus
            uce-3191, sequence.
ACCESSION   KCPA01003210
VERSION     KCPA01003210.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 686)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 686)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..686
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="353456tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>686
                     /note="ultra-conserved element locus uce-3191"
BASE COUNT          226 a          107 c          126 g          227 t
ORIGIN      
        1 ccactcaagt gagcatgcat aaaggctacc tttaaaagca gaatgttgtt agcgtatgga
       61 actgcttggg gaaatcaggc tacctgtgta attatttcct tagtgaaaac ttctattgca
      121 tttaattcaa cacaaaacat tttctatatt tcatgtcatg ggtaggaatg aaaatggaga
      181 tagttcatca atgctgatat gtgatataaa aagagctgag aagccaaggg tatgagagtg
      241 cataaaaatg ttttgtgtcc tgaccagtac attgcttatt ttacaatcag ccccaattgt
      301 tcattcctcc catgcagaag atactcacat attcattttt aaaagggcaa atcaaccata
      361 attcagttta taaactgtga agctggttgc gaatgtctgg atgaatattc attagaatct
      421 cttaatctgc catcgactgt gattcattag gcatatgtaa atatcactca ctttaattgc
      481 ccctaaactg acttaacata atattgtcat tagcaaatta ttagttattt gtgtaactaa
      541 tggtacatta tggtgtagac gttaaatcgc caaatatatg attacaatta tgatgatgtt
      601 ttatgcgggg tgcaaactgt ttgatgaaat ataatggagc caaatcaaat ctggtatgtt
      661 aataagacag ttgtggaact ttatta
//
LOCUS       KCPA01003211             522 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 353562tic ultra-conserved element locus
            uce-264, sequence.
ACCESSION   KCPA01003211
VERSION     KCPA01003211.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 522)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 522)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="353562tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>522
                     /note="ultra-conserved element locus uce-264"
BASE COUNT          137 a           91 c          116 g          178 t
ORIGIN      
        1 tttttgtcat tttgttccct cagacttatg aggatgaaac tcgcactcct gggggtgcca
       61 ggcattttag atcttgcatt taggaggagc cctgatgctt tttgcgtctg tttgtctgtc
      121 catctgtctg ctggtctata ataagctgtg cagcgagaca gcagcttact atctgtgtgt
      181 gtgaaattag ctaattggtg ttagcagcaa tattttcaca tgttttataa gcaaagtgca
      241 gcaaggtata taaatgtaga tatgatccag agacacacac cgcgcgcgca cgcaagcctg
      301 tcgctgctca tgcatagacg ctcagaagta attaatgtta ataagatttt aatgtgcttg
      361 tgagatcata atgaggagaa atgaatgctc tgattagaaa aaggtaactg tgtgtgtgtt
      421 ttggcttaga acaagatttc ccctcttttt tataaatcac aatttcagaa cttgtttgtg
      481 attgcatcaa tcggttttta ttttcaaatt agaggcctgt tt
//
LOCUS       KCPA01003212             579 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 353672tic ultra-conserved element locus
            uce-3228, sequence.
ACCESSION   KCPA01003212
VERSION     KCPA01003212.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 579)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 579)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="353672tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>579
                     /note="ultra-conserved element locus uce-3228"
BASE COUNT          164 a          123 c          113 g          179 t
ORIGIN      
        1 ttgtccattt ggagtttttc ttaattctgt attatctgtg cagttttgct atacactagt
       61 gtagggaaac ttcatcacag actgggagaa aaatatctgt tcacctttac ttggactctg
      121 tggcctggat ttgtggtgcc ttacaaataa ggagcttctg gtgcagcagc ctgcacatga
      181 cgtctcccta ataaattcac atgacagtca tgaaacgctc ctataatcag tgacacggga
      241 tgattttccg ctcctgacaa gcccttgtat tgagtatgat aacagttact ttgtcttcat
      301 ccactgctgg agtataatat caatccgttt gatgatccag caaacgaagc ccaacacttc
      361 tgtatcaatc ttcatagagt gctgcctgtt gtctaacaaa aagcctgaaa tgagatcatt
      421 caatcacttt gctggctagg gtaggcttct cttacagaag tggttttaac tccctgtcac
      481 tttctttccc tttccttcac acagcgaagc tggggaatct aattgaaata gaaatataat
      541 tttaaggcaa cattacagag caaacaaggg agagaaaaa
//
LOCUS       KCPA01003213             657 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 353780tic ultra-conserved element locus
            uce-220, sequence.
ACCESSION   KCPA01003213
VERSION     KCPA01003213.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 657)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 657)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..657
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="353780tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>657
                     /note="ultra-conserved element locus uce-220"
BASE COUNT          223 a          130 c          108 g          196 t
ORIGIN      
        1 gaggctaacg tggtaaatag gggaaattta ccatccgtaa tgggaacaaa aaccacctaa
       61 tatgtttagt aatctacacc aatgtaattt tattagctat tcagtgcagt tcttacatca
      121 aacagcctca gaagccccag gatcatttta tattcactgg aagacagaaa gaaatccaaa
      181 acctagttaa ataaattgtt catttattcc tttcctttta tgcaccaaga tctacatgtg
      241 gtcattaatt ataaagagac tattatagca ccatattttc attcaatacg atgtcctggt
      301 atatatcaaa gaagtcccat aattaaaaca gaagggccac aatgacaatt aaaattacaa
      361 tctatatggg gaaagaaagt acagttctgc aatttttcac cctgtcactg tcagcaccgg
      421 gggatattcc agtcacgtct cttgtaaagc agcctaaatt cttcttcacc aatgcaacct
      481 caaaagcatt atcagcacct aagcaaaagc ctatgcaagt ataatttaat accaagccac
      541 agtttgcaag taatagcgta taaagtgata tttaagtggt gttttaagca cacttctgat
      601 ggctacagcc gccttttact ggtaaatgcg ttttcctttg agtagtgatt atgagtc
//
LOCUS       KCPA01003214             555 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 353886tic ultra-conserved element locus
            uce-7242, sequence.
ACCESSION   KCPA01003214
VERSION     KCPA01003214.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 555)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 555)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="353886tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>555
                     /note="ultra-conserved element locus uce-7242"
BASE COUNT          171 a           99 c          102 g          183 t
ORIGIN      
        1 aggaaaagaa ggaaaagaaa ctgatggcac tttaaaattc tgatacagca cagaattatg
       61 atttcgcatc tcctgtctcc tccagagcct tactaagaat taataagcag gcagattgaa
      121 tttctaagcc aaaatcggtc tcgagtcact aactttggag tgcttaaagt ctttctttta
      181 ttgagcataa actgtaatgg atctaattta tttcagacat ctagggccat tagcatatgg
      241 aaagtctttt tatccttatc cctgccatat gctttaattc ccaggacatg ttcggtgagg
      301 ctctaaacag tttttatatt taattataat agcttgctgt tgatctgata gagctaaagg
      361 agacctgttg tcactggtca gaggttaaat actgattcgt ggagcagtct gtgcacaaag
      421 ccctctctct gtatttcctt ggaattattt tatcctgtcc ttaatacatg ttcaatagga
      481 attccttagg gagtaaagaa tttagcaaac agtaaactga gtggtttctc tttgaaatca
      541 ttacaaaatc aataa
//
LOCUS       KCPA01003215             671 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 354000tic ultra-conserved element locus
            uce-1946, sequence.
ACCESSION   KCPA01003215
VERSION     KCPA01003215.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 671)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 671)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..671
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="354000tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>671
                     /note="ultra-conserved element locus uce-1946"
BASE COUNT          176 a          131 c          143 g          221 t
ORIGIN      
        1 cctctggttc ccctgctctt tggatgaatt agcaaaagct gtttacttgg agctctgtgc
       61 acttgctgtg gagtttcctg accccagtgg tctctttact ttgttcaagg tgaattgtca
      121 tggtgtcatg atgtaccctt ctcctctctc attattttaa ttgactctct ttatgttgtg
      181 gcatcccagc tatgttgaag ccccagaggg caccttgttc ttctaagaac tccaaacttt
      241 ttttactggc tgcagaataa atgctgcctg aatgagtaat gattagaaag cttttggaac
      301 tgtattacca taggtgacag ctctgaagag ataggcaggt aatgttaaga ggcagggata
      361 agaggctatg acattatgtc tggagggtta aggactcaca gtcaaagctt gaactgctat
      421 tactggatca atacttctca gttcaacact tatcttgact actggttaga ggcttttgta
      481 gatatgaaca ctgagagagc aaaataaaac tgaaaaaaat gattgttgct gttcacttac
      541 atgtggattg ctgcagttat ttaggtttca gatccacaat tttcttcgtg gggcaaactc
      601 caatgacctg aaagcaggat gaaaccaaca agtcatgaat tatattgcat tttccttgtc
      661 cttttccttc g
//
LOCUS       KCPA01003216             582 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 354107tic ultra-conserved element locus
            uce-4413, sequence.
ACCESSION   KCPA01003216
VERSION     KCPA01003216.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 582)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 582)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="354107tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>582
                     /note="ultra-conserved element locus uce-4413"
BASE COUNT          216 a           88 c          118 g          160 t
ORIGIN      
        1 agaatggaat ctccttacga ggtgcttgat ttcaatacag ttttaaacct tagaacagaa
       61 tcaacaacat attttaatca ggtacctttt caggtattca ctgcatgaag taccagttgc
      121 ctgagggtta tgaaataata ctaaaaactt tataatcatt cattgattta gttttgagca
      181 tagtatatca tttgaatcca atgggaacat aaagcgctat ttgtgaggtc aaccacagta
      241 cagacagagg ctgacatgat atcgatggca aggtggaaag aaattgccaa atacagcaga
      301 tcaatacctc gtttcactgt tacacccttc tggagacata aaatatatat ctttacagct
      361 acgaaaataa taataatgaa agtgggagat aaatgcttcc ctcaaggtaa actatttgat
      421 tagctgaggg caaaggtgat aagagcagtt acactaaagt aacttcacag tcttaaataa
      481 aaatggtggg aagagaagca gataaagggc aaaatgaagc tgaacaagtt ctaggagata
      541 tagatgtact tttagaaatt ggggtagaat gtatacaaag gc
//
LOCUS       KCPA01003217             635 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 354323tic ultra-conserved element locus
            uce-2994, sequence.
ACCESSION   KCPA01003217
VERSION     KCPA01003217.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 635)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 635)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..635
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="354323tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>635
                     /note="ultra-conserved element locus uce-2994"
BASE COUNT          151 a          134 c          153 g          197 t
ORIGIN      
        1 ctgggaaaga catggaagtt acgtagcctt taggtgactt tttgtgctcc tggtcttcta
       61 ctttgttcat tcctctgaga gtctacaggc gtgaccactc accagtcaga agatgccaaa
      121 gtaaatctct accatgtgct ttctcgtatc ctgtttctct tcattcatgg gtcttctttt
      181 tctcttgata ggaccagagg gctgtaacct gtttatctac catctgcccc aggagtttgg
      241 ggatgctgag ctgatgcaga tgttcctgcc tttcggtaat gtcatctcct cgaaagtgtt
      301 tgtggatcgg gcgacaaacc aaagtaaatg ctttggtggg taaagataac aaaacaatta
      361 gattcatcca ggaaagggct ttctctgaat actttacctt tcaaactgct ttctttctgc
      421 ttaagcttta tgatttcctg tcaatacttt cccccttcct tctttctctc ctgattgtct
      481 catgctcaga gttgtgtgtg ctgcttagag gtcaaggttt ggcatctcac cagcagcaag
      541 atgctgcagg cagggtcaga aaataaaagg gaggtgggga gggtaaaata ctgaagcacc
      601 tggaggaaaa tggagggggg tgagcatagg tgaaa
//
LOCUS       KCPA01003218             719 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 354435tic ultra-conserved element locus
            uce-233, sequence.
ACCESSION   KCPA01003218
VERSION     KCPA01003218.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 719)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 719)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..719
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="354435tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>719
                     /note="ultra-conserved element locus uce-233"
BASE COUNT          184 a          156 c          153 g          226 t
ORIGIN      
        1 cagttatggt cgataatgac gtgcagacca ttattcctta aaagctaagt tgacaatagc
       61 ttgtatcggg agacattcta tcttcataga gtcccttgta aatgcaaaac tagatgggta
      121 tttttttaaa gaaattgcat ttctttatgc tgtcttaggt gaattttcat gtttaagaag
      181 tcagaataca agagagtgct atattagtgt attattctca caacaaacaa gccactgttc
      241 tgttgctacc tgcttggcca ttgttcccaa ttgtgtatgc tttgcagtgg tatttggatg
      301 gtttcctgct ctctgccagc acaaaaaagg catttctgtt acaatggccc ctaaccacac
      361 aatgacggca ttaaggattt atttggaggt ttcattattt tctcctcttt tgttccttcc
      421 aggatgtctt ccaagcgacc agcctctccg tatggggaag cagatggaga ggtagccatg
      481 gtgacaagca gacagaaagt gggagaagag gagagtgacg ggctcccagc ctttcacctt
      541 cccttgcatg tgagttttcc caacaagcct cactctgagg aatttcagcc agtttctctg
      601 ctgacgcaag agaactgtgg ccataggact cccacttctc agcacaacac aatggtaggt
      661 ttacttatgg tctattgtgc ttacatccat tctttgaatt ctgcctcttt ggcatccag
//
LOCUS       KCPA01003219             647 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 354548tic ultra-conserved element locus
            uce-7064, sequence.
ACCESSION   KCPA01003219
VERSION     KCPA01003219.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 647)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 647)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..647
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="354548tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>647
                     /note="ultra-conserved element locus uce-7064"
BASE COUNT          175 a          127 c          159 g          186 t
ORIGIN      
        1 tttttctata atgggctata ctcgttgctg tttttgcagg gcttaatatg gttaatttcg
       61 ggtgttgttt tacctgtaat tataatgaag gatgttggag gcagagaaca ggaaacagaa
      121 ctgaccttac aacactctgc agagagattc ttctccatct ccatcagcac accttttaag
      181 acagcattgc tgcttcgcca aacatcctcc taagcgagag aagtagggat aactcttgga
      241 aaaagttttg aggctagtga caaaatatgt ttgtctttca gatccccagc tcaagggtat
      301 agtgaccagg ttatattgca ggcaaggcta ctacttgcaa atgcaccccg atggaagtct
      361 cgatggaacc aaggatgaca gcagtaattc tagtaagtga ctgccccagg ggaatgtctt
      421 aatcgcacac gcagatcgca tcgctcgaat gtgtatgcac aggcaccctg ttaatgcctt
      481 tggagggttt ctgagtgggt tttgtgtcca ttcaacgcca gcacggctcg tgcaggacat
      541 tggcctaaat gtgttgcctc tgaaggggaa ggcgtaagtg ctcatggtta agagggagat
      601 atttaggcca atgaatgtct tctggtaatt ttatgtaaaa ttatata
//
LOCUS       KCPA01003220             517 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 354653tic ultra-conserved element locus
            uce-4977, sequence.
ACCESSION   KCPA01003220
VERSION     KCPA01003220.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 517)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 517)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="354653tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>517
                     /note="ultra-conserved element locus uce-4977"
BASE COUNT          144 a           90 c           84 g          199 t
ORIGIN      
        1 gttttcagca tctccaattt taaagtttaa atagatctat actttcccca aggacttatg
       61 tgcaaactaa tattaagatt aaaatctttt atgtttgttc tgtagcttga aacaaaaaac
      121 tagtgcatag tctgttttat cccactggct ctctaaggtt caggtattaa cataaataca
      181 acccattaac acttgttcct ctctgtcagg acataaatta agtctgcagg tgttccatga
      241 agctttaccc ttggtactaa ttaagccttg ataattaggt ttgttaaatt caggccttta
      301 agcttatatt cccactttgg tttgccaaaa tggggatttg caatatacag ggctttttgt
      361 tgcttttcta tcttgttttg gttttgtttt caacaaaact gcagttgtag taaactctcc
      421 tttgtttaga tggttaaaga ttcaaaacct gtgaagaact tggatatcag cttatattta
      481 catcagaaca ttttcttttg ctggcttttt tggcaga
//
LOCUS       KCPA01003221             639 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 354763tic ultra-conserved element locus
            uce-876, sequence.
ACCESSION   KCPA01003221
VERSION     KCPA01003221.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 639)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 639)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..639
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="354763tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>639
                     /note="ultra-conserved element locus uce-876"
BASE COUNT          207 a          116 c          139 g          177 t
ORIGIN      
        1 ttttttatag tatgaaaatc ctgcaatgga ttaaaagaac tttttactct ttaatcaggg
       61 gaccgatgag ggaaagaaca ttaatactca gtttttattt taccaaattc caggctagac
      121 tagtctggaa aaagaggcag tttatatata agaaagtgaa acactaaaaa gatcttagtg
      181 caatgcagat aaggttttta tgagcacata agagctacag tgtatataca cagctatgca
      241 cagaagattt cttaccatga attgcacatt gtcaaatcca ttagccagca agtggttttc
      301 atactgaggt agcccaatat tttccaacca ttgtcccact gtctggacag ggcatcgggg
      361 tcctgtagga gggtgaagag ggaggcgttt aagcaacgaa taaccatcca ctggataata
      421 gcggtagtcc tgggctgaga ggtggcattg ccacatcgtg ttcctcgaaa agttggtatc
      481 aaacgagccc gccagcttga cagattaatg ttttcagcaa acagaaaagt cagaagtaaa
      541 acatagtttt cagggcagta tataacgtaa gatctgatcg cagctctaca tttcttggtt
      601 attaatcttt actacagacc agtacgtcat acagtaggg
//
LOCUS       KCPA01003222             481 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 354872tic ultra-conserved element locus
            uce-459, sequence.
ACCESSION   KCPA01003222
VERSION     KCPA01003222.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 481)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 481)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="354872tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>481
                     /note="ultra-conserved element locus uce-459"
BASE COUNT          146 a           82 c           89 g          164 t
ORIGIN      
        1 aatatggttt gatagtgggc acaagcactt ggtggtatgt tgaatcttcc cacaaggcca
       61 ttttacataa tttattaaca agatcatttt actttctgat ttaaaagatt tgtaactata
      121 agctcctgtg ttttccctga gcaagtcaca atgcacacag taggcaaagt gttaaagggc
      181 taggaaaata ttatttcatc actcctgttc cattagaatt cacttgggtg gctgagaaaa
      241 tggtttatgg attagagaga gaagaacaag ctaaaacatt tcataccttc atctctgata
      301 aattccccaa actcattctt tgcatctgag ccataaataa cagccatgct ttttgctaaa
      361 aagagctttt ttcctgtacc aggtcttttg tcttggagat gaatgctata ataaatttga
      421 agtcttaggg ggggcattgt ttgaactata acattatggt ttacaactgt tgcttctatt
      481 a
//
LOCUS       KCPA01003223             502 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 354980tic ultra-conserved element locus
            uce-2282, sequence.
ACCESSION   KCPA01003223
VERSION     KCPA01003223.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 502)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 502)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="354980tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>502
                     /note="ultra-conserved element locus uce-2282"
BASE COUNT          153 a          107 c          102 g          140 t
ORIGIN      
        1 ccagctcagt cttggaaatc cttgtaacag attctgattt gctcatttct cctgctttca
       61 tttttctcct gtctcgggtg aagggtttgt gtttaataac atcatttgca tcagtgtgtc
      121 ccaacagacc aaggtaccag ggctgggaga gattagcatg gtaatctcat tctgatggat
      181 aaaattagca aagatattcc cctgaacaga gggctgccat tggtgaactg ctgtgcttag
      241 aatcaattac taaattactt tgagctctaa gtcgacagta acagaaaaaa attggcatcg
      301 accgaagcga aataagataa aaaatatgcg atcattaaat ctctcactac tattcgcgaa
      361 tgtgactcac aagaactgca caaaaaataa ggcagaattt aatttttaac agtggtccct
      421 gtcatcattt caaccagagc tgctcagtgc atgggagcac agctcagcct tcaaaggaag
      481 aactggcctg ctagcagctt cc
//
LOCUS       KCPA01003224             765 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 355091tic ultra-conserved element locus
            uce-4292, sequence.
ACCESSION   KCPA01003224
VERSION     KCPA01003224.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 765)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 765)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..765
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="355091tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>765
                     /note="ultra-conserved element locus uce-4292"
BASE COUNT          249 a          152 c          112 g          252 t
ORIGIN      
        1 attttcatat ttcacatttc taccagttaa acagctcaaa tttctccact cccagttttg
       61 aaaagcacag aatactgact ttgtaccctt gggccacttg gatttaatat caaattctta
      121 ccttgcacag ggtcagagaa aaaataaagc ttataaaatt ggactcatat gaagaatgag
      181 tttctatctt ttaatactac caaacaatct gcaaattatt taaattaaga caaccagcac
      241 tccaacatct gcaagcaaaa tgtttaaacg ccaaatgcaa ctttactggc ataagaaaat
      301 aataagtgga gttcaatttg tgtcagcata gctcaggaaa ataagatatc atgtcttgct
      361 gtctgcttga tgtcaacttc tcagattcaa accctaatgc ctcatcttag gctgtcctta
      421 ctggaggctg ccaaatagca aggttcagcc agagttcatg tagctactac aaaataggct
      481 tctccttttt caatcattat gaaccttctg ctttatattg tacacacttg attatatcta
      541 tccttgaaat gtatacaact ctattagcct cttctcctat tcttttaaca tactgtaaat
      601 tcctttctgt gcttagtttg ttttatgact tacagaattg ggcttttaaa ctttcactgc
      661 acagagaaga ttgagttgtg caactggcta caaggagaaa acaaaggaat gggaatttta
      721 ttaataccaa aagtacgaac ttttgccatt tctactaaaa tatta
//
LOCUS       KCPA01003225             641 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 355310tic ultra-conserved element locus
            uce-2238, sequence.
ACCESSION   KCPA01003225
VERSION     KCPA01003225.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 641)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 641)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..641
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="355310tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>641
                     /note="ultra-conserved element locus uce-2238"
BASE COUNT          191 a          120 c          119 g          211 t
ORIGIN      
        1 tttatttcta gtttcaaaag aaattgcata ttcttgctgt ttaggcagtt cttctgggtc
       61 atctaggata aatatatata taaacactgt acctttatac ttcagaggaa agaagctctt
      121 gtatcacaag caatgttttt ctggtacagt taacttattt ctgtctcctt aaactagttt
      181 gtctttatgc tttgaatgct acagtaattt ctttaatcaa attgatggaa gtccctttcc
      241 cagcccacac tgaaaccaat ttattggtca tgatacgccg gctatgttgc taacagtcgt
      301 aacgaactgt caggcaatat cgcagtgcag ctaatttgaa gtcattaggt gtgcagcgtt
      361 caggcaacaa tttgttacag tggttaggaa cacagctgac atttctgaat ggctttgttc
      421 agagcagttc tagatgagcc caagcaaatt gtaaactaat ttaaacatca ctctatatta
      481 taggagctac tttgtcttac actggttgct aataaagcac cccaaattaa gtcaaaatga
      541 gttaagtagg tgagtttgag tttcatcttt ggaagatacc tacatcacct taaccaaaat
      601 agagtagctc tcagtcatgc tccatagcag ttgcagggga a
//
LOCUS       KCPA01003226             667 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 355420tic ultra-conserved element locus
            uce-6671, sequence.
ACCESSION   KCPA01003226
VERSION     KCPA01003226.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 667)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 667)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..667
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="355420tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>667
                     /note="ultra-conserved element locus uce-6671"
BASE COUNT          221 a          129 c          114 g          203 t
ORIGIN      
        1 aaatgaacag cagaggttta caggcaccag gatgttagag gagcagtttc accctgacaa
       61 aagaaaacat acctacccac tcttttagat ctaagaagga accgaaagaa cttaaaaaat
      121 gcaacagaga agttatttga catatcacag ttagagctac aaagatcatt cctctaacat
      181 ttgagaaaat gaaacctact tggtactcct tcatcaccat gcatgtaccc tcaattaaag
      241 cagtgcccct gatagcaggc agtataatct gcattttatt tcactcatga gcaaaacaac
      301 aagttactca ggcctgcggc actcttgagt gatatgggcc gtgtaatatc ctctccattg
      361 agtttcctat tattaagttt gaaataaaga gttcaaaatt aactgtgaca atgattttct
      421 ctagtgttgg catcaccatt agcttctgca gtttactgct aataaaactt taaatttgct
      481 attactcgta ataacctttt tgccacctta gctgtagaaa ttagacaaag aacctggcca
      541 aaacacggct aatgacattt tctgttttca tggaagaatt gactagaagt aatggtggtt
      601 agttataacg tgttaatact ataaatttca gatttcagct gattaatttg aagcacttgc
      661 ttctttt
//
LOCUS       KCPA01003227             479 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 355525tic ultra-conserved element locus
            uce-5904, sequence.
ACCESSION   KCPA01003227
VERSION     KCPA01003227.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 479)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 479)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="355525tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>479
                     /note="ultra-conserved element locus uce-5904"
BASE COUNT          163 a           71 c           93 g          152 t
ORIGIN      
        1 gcacacagtg gggaatgagc ataaaaaatg agggggaaaa acccatctac tttgcagcta
       61 tattcattaa ttaaaagaag attgttaaac taaatttgga cttctttaat tgtgtttacc
      121 caaaagcctt ttcttcctaa tttaaatagc ataaacatct ggactaaagc aatattagaa
      181 tcatggcagt agtcaagcaa atcttgtgga aaataatgaa attagatccc tggtgttgtg
      241 acagagtaag ggcaggatac atcagttcga tgttaataaa atttccatga atgactgaat
      301 acaattaaga aattgtcagt tgcggcaatg aacttttgta gctcatagat gtttgcatca
      361 tttgattatg ctggcaattt aaaattgttt gttagtgtct gtgttgggat attaattatg
      421 acctttatta cagcccacaa ttaaaccagt catatagcaa caagcagcct gtgttgtgg
//
LOCUS       KCPA01003228             635 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 355637tic ultra-conserved element locus
            uce-3263, sequence.
ACCESSION   KCPA01003228
VERSION     KCPA01003228.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 635)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 635)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..635
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="355637tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>635
                     /note="ultra-conserved element locus uce-3263"
BASE COUNT          162 a          141 c          154 g          178 t
ORIGIN      
        1 tttgctgtaa taagaaacag acataaagtc ccccttgtca caacaaccct cagtgttttt
       61 atttttcctc ctttgaaatt gacgcagtct gggcaataga tgcagtctga ccctttggat
      121 gtaatttttt tgacaacccc taagagcccc ggggacaaaa agcgttggag gacctgaacc
      181 ttttacctga gcccaggttc tccggcgctt cacaaccaaa tggggctaca gagaagcgtc
      241 taagccagtt cacagagcga gcgtgtgtgg ggacttctcg ctgccacgga cccttgatgc
      301 atgctccccg cgctccagtg gtcccgtgtc agagggcgga gttttcgaaa ggaggccgcc
      361 aaaaataaaa ggcaaagaga cgggatcggc tgcagcggtt tcccacagga ggagggagtg
      421 tgcatcggtc tggtaacgaa cagagaatgt ttctctcttt aaagtctgtg ttttatcttg
      481 gatattttca gaatattctt gttaaaatgc agatttttaa atctgttagg gcactttaga
      541 atggtgcatt tgaaaatata gcaaataggt gcttttaggt gctttcactg aagcgttgca
      601 ctaacatcta cttgatttct gtcccgtaac tttac
//
LOCUS       KCPA01003229             634 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 355748tic ultra-conserved element locus
            uce-7741, sequence.
ACCESSION   KCPA01003229
VERSION     KCPA01003229.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 634)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 634)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="355748tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>634
                     /note="ultra-conserved element locus uce-7741"
BASE COUNT          215 a          115 c          102 g          202 t
ORIGIN      
        1 taatgacagg ttaagtacaa ctgaaattct gcatcccagc agcgttcgca ctagccaatg
       61 ctcagggcca atggaataaa acaaagcagg tgagaaatac agaaatctat gtagcatgaa
      121 atatctctaa gagacttgtt tagtgaaatt aactagtagt ttaatagaaa aaagcttgat
      181 gtatgagagt gctccaattt cttcatagaa attaacattt caatcctgtt tttatctaga
      241 agtcattaaa ctgtgcaaca tgaattattg gaactgtagc agagaattaa ctctattcat
      301 caagtaagtc caaacagttt agagtgcatc tgtaatgaaa aaatagctcc acatttctat
      361 ctcttctcat taaagtaaac cagttttccc tctctcagta tataaaactg tcttctcctc
      421 atgtaattta tattaccata agccagctca cattctaaac tattacacgc ctccaattaa
      481 tttttgcagc ttttgcctga aaatttaatg agatagtagt gtatgaacct gctgactcca
      541 gattacatgt gtgcttccaa tattaatgtt ggcataataa tctgatacat acttgatgag
      601 agctttccac tattgtgaga gtagttaagg caat
//
LOCUS       KCPA01003230             532 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 355859tic ultra-conserved element locus
            uce-3810, sequence.
ACCESSION   KCPA01003230
VERSION     KCPA01003230.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 532)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 532)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="355859tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>532
                     /note="ultra-conserved element locus uce-3810"
BASE COUNT          151 a          113 c          101 g          167 t
ORIGIN      
        1 gcagtcctca tcctctcctt ctgcgacagg ctttgtgtcg ggtgaagagc ctgctcctgc
       61 gcggggacaa ggtgtggctg atgcgtccca gataaatcct cacacaaaaa ggcactgtgt
      121 cactgaatgg gattccagtg tagctcttta atttcatctc ttggaaatgt ttctcttctt
      181 tcatccaact gcctttatct taacttctga tctgaggaaa gcagcagcct ttcaaattga
      241 acaaaccgtg tttcaaatag gctcttctgc ttgtgacaag atgtacctca ttttctctgc
      301 aagccctcag caaggtcaca cctttttaat ttattttctg taagaaaaat ctagttgcat
      361 gatagaacaa ggccagatct agctagaggt catttcttga attagtcata aagtagaata
      421 gaattagaac cattccaaga actttacaag agcagttcta ttaaaatata ggctttgtgt
      481 ttacaattca acataagtag ctgcttaaag ttgtagccaa ttcagtaata at
//
LOCUS       KCPA01003231             669 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 355969tic ultra-conserved element locus
            uce-3470, sequence.
ACCESSION   KCPA01003231
VERSION     KCPA01003231.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 669)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 669)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..669
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="355969tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>669
                     /note="ultra-conserved element locus uce-3470"
BASE COUNT          215 a          138 c          121 g          195 t
ORIGIN      
        1 tttcttgcac agcttcccaa ccaagtccca gccacttgag ttgcccatga acctgtacac
       61 aaaccccctt aaccacagaa tacaggcacc aaatgagata cactgggggc accttccttg
      121 ggctttgaac tgggatgttt atccaaccta cctgaggcag tcagcaatag aaaaaggaat
      181 gataataaaa ggttgattaa ttatgtgcaa taactgggac agcatatcat gaaaattcca
      241 ttcttgttta ctcagctaat tcacttttta tgagtgttta ggctttaaag caaaacaaag
      301 cactaattac ccaattaacg agcaattaag ttactgcagc ctaatagcct gtacagtggc
      361 tgcctttatg agtctgatgg tgagttagag acccattaaa caaatttata cacagctgta
      421 gcaaacatta catttccaga gatgttacat tacatgctaa tattttcaca gccttgaaac
      481 atcattcact ggtttagtga atagtttgcc agtttactca gccaagctca aagggaaggt
      541 gttgtaccag cagctacaac ctaaggatgg atgaggatct ctgtatttca aagccttctt
      601 gaaaaatcag gtggctttta accaaggtga gtaacattta cattaaaatt ttaattttgc
      661 cttaattta
//
LOCUS       KCPA01003232             778 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 356080tic ultra-conserved element locus
            uce-6730, sequence.
ACCESSION   KCPA01003232
VERSION     KCPA01003232.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 778)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 778)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..778
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="356080tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>778
                     /note="ultra-conserved element locus uce-6730"
BASE COUNT          201 a          191 c          159 g          227 t
ORIGIN      
        1 aacctaaaga taaaagcaga ttcagttgga taaatgaaaa cagtttgtaa atgtgtatgt
       61 gtgtttcata tatgtcttca cataaacaca tgtacataca aatttatcag attacatctg
      121 cttttacctt taaattttta tgaacacagg catatggcac attttcctgc cttggatttt
      181 ttgtctgcac agacaggctg gcttggcact ccatgagcat acacagcttt aagtatttag
      241 ctgagaaact ctgttggaaa ttagagcatc cgtgcttgca gagctctggg tgatttgacc
      301 tcccaggggg tcccccgtct ggcccctggc tcaccatgcc atgaatacat ttccatccat
      361 ctccagcccc catcacctag gcagctaatt cctttgagcc ccctccgcct tattaaagtc
      421 acagatcact ttaccaagct taatactgtc agggccagca gagcaagagt tcagacaggc
      481 tcaccacaat cccagctttc attagggtgg ggtccttctc gtgttttgat ctgcacaact
      541 cgtagcaatg agctgtaggg tcgcctccag attccttcag taaacccttg gcatggatac
      601 aagtgccatc acagctgctg caaaacctgc ttccaaaggc agcagcgctg cctgtaatag
      661 gaaaggactt gtggcacact gaaagtattt ttcatcagag gggtgtgagg ctaatttttt
      721 atttggagag cacttttccc ctctacagtc tgttttgcct cccctgttat gaaatatg
//
LOCUS       KCPA01003233             781 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 356190tic ultra-conserved element locus
            uce-6085, sequence.
ACCESSION   KCPA01003233
VERSION     KCPA01003233.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 781)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 781)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..781
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="356190tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>781
                     /note="ultra-conserved element locus uce-6085"
BASE COUNT          248 a          159 c          133 g          241 t
ORIGIN      
        1 ggagcttggt attattctca atgcacttcc ccagccacaa cttctccaaa atcccttttg
       61 tctttctttt tttggcaggg aatgagagca gcatagctgt agtgtaacaa aagcagacat
      121 gaaaccaaaa ataaaaaaaa gaagttggtg ctgagagggt taaacctatt taaggggtta
      181 aatacgcaat taccactgac taaaaccaga gagacatata gataaataga agaaatgaag
      241 tccccaggtt ccattcagaa gccttcatca cattactacc agacagaaaa ctctttaagt
      301 accattttca gatgttaaat cattgttcgt gcagcacata ttctcactat tccttgggga
      361 acaatatctg aagacagcgt gctaacaaat gcaatccagt aaacaggcat ttttcctctt
      421 gttgttagta cctttgtgtt ccagctccca gctctgtcat ccatgccttc tctctgcttt
      481 gaagttaaag tactgaatga gcgttgtcat ctattatcca gagtgtgcat gtagattata
      541 aataagaaat aaaagtgact ttcagtacac tgcttttgca ttagcaagtt gccttctctg
      601 ttacctcgtc tgtccttcat actttgctac caacatttta ttaaaaatat gactttaagt
      661 gtttcttcta gaatgctata aaatatgtac atagcagaga cgaaagtttt attgaaacaa
      721 acaagtccag cagtttaacc aggttcatga gttcagcttc aacagactgt ttaaccctta
      781 t
//
LOCUS       KCPA01003234             794 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 356301tic ultra-conserved element locus
            uce-5178, sequence.
ACCESSION   KCPA01003234
VERSION     KCPA01003234.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 794)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 794)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..794
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="356301tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>794
                     /note="ultra-conserved element locus uce-5178"
BASE COUNT          248 a          161 c          156 g          229 t
ORIGIN      
        1 aggggccttc atctgcatgc aaaattccta ttgacatcac tgggagggcc acaggcagat
       61 ggagagtact ttgtaaacct tacaatgttg taggagaaag gcacagaatt tgcagtccaa
      121 aaaagtgagc agctttatca aatattggtc cttaaacacg gagtttgaat cacagttttc
      181 ccagtaataa caaccctctt ctctgcaagc tatctaacct acacgtttct gtaaagtctt
      241 catatttaac actcaaacaa ttgatgtccc catagtataa acaggataga taatgaatat
      301 aagtgggata gaaaattaat cctacttgcg aggaaagaga gtcataattc acttaggctt
      361 ctcagctctt acgttatgag gtcttcagct aactcatggg atccattcca catcccacag
      421 atgctcatta tgaattcttt ttatgtgcaa catgtgggga ctaaccagtt tcatatctcc
      481 tggtattagc cgcgatccaa agcattttgt attaaaacag aatgcaaaca cagatgctat
      541 ttaatacaaa ggatttgaat agtctctgat ttaacataaa gttggtgtgt cttaatttgc
      601 tttgaaatag caatgggaag aaaagtctta ggagccaagc tttgacaaaa aaaggagact
      661 ggaccaggtg actgctttga ttcatggaag caaaggttac aatggaacct ctgcctttga
      721 gatgctgcca cagccttttc aacactacac atattctgga gtgctactac ctgtgttctg
      781 tcccgtgcag ctcc
//
LOCUS       KCPA01003235             581 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 356408tic ultra-conserved element locus
            uce-7455, sequence.
ACCESSION   KCPA01003235
VERSION     KCPA01003235.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 581)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 581)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="356408tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>581
                     /note="ultra-conserved element locus uce-7455"
BASE COUNT          174 a          100 c          100 g          207 t
ORIGIN      
        1 atggaagact cccctctaat ttatttattc cttttctgtt ctgttatcct gatatgctgc
       61 ttccagttac cactgcaccc tgcactgtat ggtattacgt gattttgttt tcagattgtt
      121 ggagataaag ttacttcatt attaatatat atgcactgtg catatccata aatattgaat
      181 atatacgaaa cctactggaa gtgttaatag ttaagataaa cgaagtccat tattgcaatg
      241 actgactatt tctatgaccc tatttgcaat aaaagcagat tcaatgatat gagaaaattg
      301 ctgggtttca gaataattga accaggccag acgaatcccc acaaaggcat catttacaaa
      361 gtactttgct tgtctaaaat atttattccc acagaaggaa atggaaaaag agttcatatg
      421 gttacacagc tatcctctga gtgtaaaatt gttttatcat gttatgttta tttcctagac
      481 atcttccact ggggtattgc agaaaaaata ctggctgtgc agttaattcc tttgtgtgga
      541 ctgttcatat ttattctctg ggaagtcaat catgttttgt t
//
LOCUS       KCPA01003236             482 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 356516tic ultra-conserved element locus
            uce-1482, sequence.
ACCESSION   KCPA01003236
VERSION     KCPA01003236.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 482)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 482)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="356516tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>482
                     /note="ultra-conserved element locus uce-1482"
BASE COUNT          146 a           79 c           81 g          176 t
ORIGIN      
        1 ggctgaaaat catttttagc ttttatctct gtgatcggtt acccctgctg ttctttaatg
       61 gccttcacct cattatgcaa ctagtcatta aaagcttagt atccagtaca atggtagctt
      121 atgtaaagtg atctatgaga gctttatata ggcttaccag ccgcagcctt aattttactc
      181 attcgtctta attttttgta atcatttttt gtaaaaaggg tataatgtca ggcatgcttc
      241 cctgcgactg acagatccaa tctagcagat aattaccata aggaaattga tgttttagtg
      301 tgcaggggag aatttaattt actcagacat cctacagtac aatgcattcc aaaagatatg
      361 aggatttaag tttttaagaa attaaatttc actatttaac atgattactt atgttgaaca
      421 tcattaacta gctttttttt taactgtttg atagaattac aagagcagtt atgtggtcta
      481 aa
//
LOCUS       KCPA01003237             601 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 356628tic ultra-conserved element locus
            uce-4237, sequence.
ACCESSION   KCPA01003237
VERSION     KCPA01003237.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 601)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 601)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="356628tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>601
                     /note="ultra-conserved element locus uce-4237"
BASE COUNT          159 a          132 c          134 g          176 t
ORIGIN      
        1 tcccttgtca tgacttttcg cgaatataag gggagaggga agaagtcatt aaaatgcagt
       61 tctttcaatt acgtcccgtt atttgtcatc tttattgctt ttctatagtt ttcattgcac
      121 ctttaacagt gtgcctggtc agaaaaggtg agctggaatg tgagcgtgct caaatcccag
      181 tccctgtaga ttttaatgtc cccgcagact gctggcagcc tgcttccagc tgtggcaggc
      241 atgatgcagt gaattgcttt tcaatgttct ttactcaaat aggcagtaat tacaagctta
      301 aagaggttta gtggtccagt aaactacata atcacccctg aattagcctg ggctcatcag
      361 ttgcagtcca gcaacctcaa gactgctgtt tgtatgcagg ctttatcacg tagcaacctg
      421 agcagcaggt gtggaacagc aagaatcccc cataaacaca actgtctact ggggacaatg
      481 atctctaatg agatgaggct acagcatcac tgtaatttaa gtgggaaaat taacgccaga
      541 gaatgtgcac tacttccaag agtctctgct tcttccgaga acagtggtgt tttcctggct
      601 t
//
LOCUS       KCPA01003238             742 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 356739tic ultra-conserved element locus
            uce-4856, sequence.
ACCESSION   KCPA01003238
VERSION     KCPA01003238.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 742)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 742)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..742
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="356739tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>742
                     /note="ultra-conserved element locus uce-4856"
BASE COUNT          225 a          120 c          161 g          236 t
ORIGIN      
        1 ttcacatttg gctaaaggaa aattggaggc gcctgtttgt actggtgaag gaggaaatac
       61 agatttcagg agtggaggga aggagaggaa gggattgcct ttctttgcat taatataaga
      121 tgaagattaa ttctgctagc aggattctgt ctgcttgtca gaattcagtg attttccatt
      181 ttggatcagc gcggtgccag aatgtaaatc ccattgcctt gtgtctttca aaataaaatc
      241 aaaaagcctc cctgattgct tatatgggca gctagcacac cttaagaagt aagaaaggtt
      301 cagacaggaa tataataagg cccaggaaag tggcagcatg aaagggatga cctttatttg
      361 caatcatagc tgagatttac agtttattac tgatagcttt tataaagagc cattcagttc
      421 agaggtgaga ggtttgtcat ctggaaatgc aattaacttt agccttatcc caatccccct
      481 ggtcttagtg tgagagcagc acttgagcaa tatcatgatt tttgtccctt ctatcccttg
      541 ttctttggca taaatacagg tgcatgtttt ttgctgctat tatttcatta ttattagatg
      601 cacctttgaa ttttttatta gctccaactt gattattgaa tgagaagatt tcaaagaaga
      661 gtgacattta aacctgagaa gatcactcat ggaaaggaat tgtgctattt atgtcaaaaa
      721 ttaattacag acatggagaa tc
//
LOCUS       KCPA01003239             623 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 356847tic ultra-conserved element locus
            uce-7914, sequence.
ACCESSION   KCPA01003239
VERSION     KCPA01003239.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 623)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 623)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..623
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="356847tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>623
                     /note="ultra-conserved element locus uce-7914"
BASE COUNT          163 a          111 c          159 g          190 t
ORIGIN      
        1 tcccacaggg gtttgtaggt gcactccgtg ttttgctttg tgtttggcag tggtggacat
       61 cttcatatga gagcttgcat ggaattgggg tgggggcaca gtaggtctca taaatgggga
      121 agccgctcca agcgtgtgag acaggtacaa aggagctgga tactgaccat agtaaccaag
      181 attcattgta ggcattgatg tgtaaggcat tacacagggt gcatagtaac tcccactggg
      241 aatagggtaa cagaatcctt gtaaaaaagg cacctttgtc atggtgtcat tggttttggc
      301 aggtctacca cgcttcttct tagactttat atcagaggtc ttgtgaagat agagcaatgg
      361 gtcatactgg atatatggca cagggtagta gtgatcaaaa ttaatcctga agacactgga
      421 atatggattt tcatgataaa atgtataact tttatgggaa atcctgaaca cttgaaactt
      481 attcatgagt tcctcaaggt ctgccagaaa ctggaggtca tctctgttct gcaggctttt
      541 ccttttcctc ttgtgctttg gctttttaat actttcgtga gagagaaagt tatccacaat
      601 gagatgtttc tgccggtgac cat
//
LOCUS       KCPA01003240             726 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 356959tic ultra-conserved element locus
            uce-7790, sequence.
ACCESSION   KCPA01003240
VERSION     KCPA01003240.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 726)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 726)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..726
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="356959tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>726
                     /note="ultra-conserved element locus uce-7790"
BASE COUNT          257 a          113 c          139 g          217 t
ORIGIN      
        1 gtccattcag aaacaagtat gagtctgata gagacaaata tgtttttcag tgtggattta
       61 catacattta tggattagaa tcaggcattc ctccttttat agtcagtata ggtttaacta
      121 ggttaaaagg ttttcctgaa tattcattca gacatttctt ttgaaataag cttctggttt
      181 aagttttgca caaattaaaa agtacataaa aactggagga ggagaagaga agggagttga
      241 aaagaaatta agtatattta agttttaggg cttacaaact tccaaatttc agagctttgt
      301 gaaattaaaa ggttagctat gaataaccac aatcaaatct ttccttttgt ccatatttaa
      361 ttcaaatgag attgctccat attgacttct aatgctaaaa ggccacccat catggaatcc
      421 ctgcagccaa tgaagcaagc aagtgaatgc tttcttaaat gatgctaatc agtccagaga
      481 ggcctgccct ctatccccat cagtattctg taattcagat gtgctgataa cctgaaattg
      541 aatgtgtcag tatgcagaca tgtgaagaaa aaaggaaact aaaaggcaaa agaggcagct
      601 atagagacaa tgcctgtttg acttttaagg gaagaataaa aggaatagtt agtagttgtt
      661 ctccaatgct tactgagtgc tgtacaagaa cacacagaaa attcataaat agaatttcca
      721 gatgga
//
LOCUS       KCPA01003241             494 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 357070tic ultra-conserved element locus
            uce-360, sequence.
ACCESSION   KCPA01003241
VERSION     KCPA01003241.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 494)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 494)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..494
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="357070tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>494
                     /note="ultra-conserved element locus uce-360"
BASE COUNT          174 a           82 c           73 g          165 t
ORIGIN      
        1 aatcttggct tgttgtacaa taatagccct ttctcaacat gggaaaaaat tacagaccta
       61 actaatttcc ttgacagaga agagttacat atgttttcca cttggagttt ttacgacaag
      121 tttacaattt tgccagatct ggaactaatt gggactattt ccaaaaatgg cccaataaac
      181 ccacaatgag tatggctagc ctaaaatgca gcaaatgatt gtttgctttt actagattgc
      241 acaattattt catttaagtt acttaaacac ttactgtttc atatcctccc agtttttgag
      301 cagcttgaaa catagtccaa aggttaactg ttagagggac aataagtatt tagataagca
      361 ttgcattagc caacatattt caaagaaatg taaattaaac agttttaagc tcctgtgaaa
      421 cattttaaaa aggtatttac ataatctgaa gagtaaatat tagcccatac tatatatatt
      481 tttaattaca tata
//
LOCUS       KCPA01003242             395 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 357180tic ultra-conserved element locus
            uce-2927, sequence.
ACCESSION   KCPA01003242
VERSION     KCPA01003242.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 395)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 395)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="357180tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>395
                     /note="ultra-conserved element locus uce-2927"
BASE COUNT          149 a           78 c           69 g           99 t
ORIGIN      
        1 taagaatact gaaataaaaa tgatgtgatg gtgagaaatg gaaaagcccc ctccctcccc
       61 acacctcccc cttcaaaagg aaaagtgtag gctatagaag aaaacttgca aaataaatgt
      121 tagaaacata tttactttga gggatccaac tctactagca actcctttgc tttcatccgg
      181 ccgtctaatt tgctacaatg ggggaagatg ggtaaaaaag acagaagaat aaagaaaaag
      241 tgaacttaaa aaaatttcca cacaatcagt tagcagtaca tgcaagacat caatttgact
      301 ctctgagaca cctctagagg acaaagacac agactctaat ttctggaata aatgacactt
      361 tatcatggca ttttaaacta gctttgttga tcact
//
LOCUS       KCPA01003243             513 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 357290tic ultra-conserved element locus
            uce-1447, sequence.
ACCESSION   KCPA01003243
VERSION     KCPA01003243.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 513)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 513)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="357290tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>513
                     /note="ultra-conserved element locus uce-1447"
BASE COUNT          165 a           98 c           98 g          152 t
ORIGIN      
        1 gcggggagat tgtgaggtga catggtcagc ctgatgaagt acacaaaagc ttttggcact
       61 gcatatctgc aatatcatgg acagtcaagg aggcgcctgt tataaaaata cacagtgaaa
      121 cacaactgga ggactgctct ttctcaaagg ctaacgtaat gcattccttc tgtttaggct
      181 cattttccag cctttcacat tctttgtgaa caagagttat aaaacaagcc tgatgcagtc
      241 caattatttt tactttgaag gccattaatc aagattgact aagaaaatga agacagctaa
      301 gcaaaatttc atatgtgact agagtgagat taaaataaaa ccagatgggg atggacagag
      361 acgttaagct gctttctctc cccttccctc cccttttttt gactcatgta ataaatgtct
      421 tttacaaatt acagcactct tattttctta cagtaaatca aattgggtca taatgtacaa
      481 gtggtctcat tgctgaaatg tcaaaaatag aac
//
LOCUS       KCPA01003244             230 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 357383tic ultra-conserved element locus
            uce-4346, sequence.
ACCESSION   KCPA01003244
VERSION     KCPA01003244.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 230)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 230)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="357383tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>230
                     /note="ultra-conserved element locus uce-4346"
BASE COUNT           55 a           43 c           67 g           65 t
ORIGIN      
        1 aaggggaaag acctctttct gctcctgctt ttgtgtgtga gtctgtgggg tctgtttgtc
       61 tcatgaagct gcttgcatgt ctaagaggaa gtgactagtt tggcagagag ctgtgatctg
      121 agtcaggtaa gccatgtcat gttctctagc tccaccagaa aatggagagt agacaaagct
      181 gagacgggaa gtgctgtgga tgtctctggc ttaatcatgc aatgcacaac
//
LOCUS       KCPA01003245             612 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 357485tic ultra-conserved element locus
            uce-4166, sequence.
ACCESSION   KCPA01003245
VERSION     KCPA01003245.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 612)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 612)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="357485tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>612
                     /note="ultra-conserved element locus uce-4166"
BASE COUNT          195 a          148 c          119 g          150 t
ORIGIN      
        1 acacccgcac gcacacacac gcactcactc cagcctctgc tactgacctt tgcctcgaac
       61 agcaataact caccacataa atgaacaatc aacggaaata ccttaaaata aaatccatcc
      121 tttctaacga agcatttcgt cctctcggct cgacaataac ctttccataa ggaacgaaag
      181 ctgtcagcga aatggccagc tcttgtgggg acggtgatgg gggcagaaaa aaaaaataat
      241 agaaagcagt gcttgctctg aacagaaact ggaaaagcgt aatcgcagac ggagccagac
      301 cgggtctcca ctccaaatgc cacaataatg cgctgtatta tgtgctcacg tggtcatacg
      361 tcaacttaaa tccttttatt tgaaataggg aatcattgaa ggaacagtgt ttcttagcgc
      421 gagccttccc tttttaaagc cttaacccaa tatgttaaag aagagtttta agggacaaag
      481 agatgcagat gactgggggg agattggtct cattctcttt cctcccacac caatatttct
      541 ttacacaaaa cccattggta ggtaagagga attcttataa cgctgcactt tgatacttag
      601 cctaattaac cg
//
LOCUS       KCPA01003246             496 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 357591tic ultra-conserved element locus
            uce-997, sequence.
ACCESSION   KCPA01003246
VERSION     KCPA01003246.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 496)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 496)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="357591tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>496
                     /note="ultra-conserved element locus uce-997"
BASE COUNT          173 a           72 c           90 g          161 t
ORIGIN      
        1 aaaagtacta ctagacccat cagggataag taaaggctat atactataga ttattttaat
       61 ccccttgcta gatataaaag ggataattac atatttgtgg ttgaagccat gtggtggaaa
      121 aatcaataca acttttttgt atgacacttc attagtgtga aaaattttaa aagctgagaa
      181 gaactgcctt gcaattaaat gcctctgctg tttcagattc agtaatgggt ttgtattatt
      241 atctagttta tttgaaatag tggttgcact atagcagtaa ttggaaaaca ttgattatgc
      301 acttgtatat agaaaacctg gcaaatcatt acagggcata gcaacagtta gttagcctta
      361 ctaatgaagc actaattgct gtaagtaggt taacatgtta gtgaaactac agggagatag
      421 agcttcgaaa tctttttgtt cagtgttaca ttaaccttat tttaagaaat ctcattctga
      481 aacacaaacc acaaga
//
LOCUS       KCPA01003247             625 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 357702tic ultra-conserved element locus
            uce-3943, sequence.
ACCESSION   KCPA01003247
VERSION     KCPA01003247.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 625)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 625)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..625
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="357702tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>625
                     /note="ultra-conserved element locus uce-3943"
BASE COUNT          212 a          120 c           95 g          198 t
ORIGIN      
        1 ctcttccagt aaatctcatt tattcatatc tcattttcta ataaactaaa atatgtcttg
       61 cttctgaaaa atttcacaca gtggacatga aagaagggaa tctgattcat ttttccacct
      121 ctacagtaag acaaggctta tttcacaaac accagcataa tacaagatat caattaacat
      181 aaattattct ttctcagatc tttttcctct tggtattgct taacagaaac caataagtaa
      241 gttcttttaa caccaatgat taggaatgaa taaacagagc aagtactaaa gctgactttg
      301 cacctactga atgctgcaag tgtctgtact cgtttgatat gcatctagca aagcttggat
      361 gttcccaaaa ggccactcca tgaacgctga gagagcagcg tctgctagtg gtgcctgtaa
      421 gacacaaaga agacagaaaa tatttatata agtgagagca actggaaaga ataatcttat
      481 ttaatctata ttccatgcta ttttaaaggc acaaacagaa acaatttcat gcaatgatca
      541 tcgtatatag agagttgaaa cacatttcag tgtttacttg tttttatgtt ttccctcatt
      601 ttcatcactc tgcctgatag atcca
//
LOCUS       KCPA01003248             413 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 357808tic ultra-conserved element locus
            uce-3790, sequence.
ACCESSION   KCPA01003248
VERSION     KCPA01003248.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 413)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 413)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="357808tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>413
                     /note="ultra-conserved element locus uce-3790"
BASE COUNT           93 a           97 c          103 g          120 t
ORIGIN      
        1 catcacccta aagctcccac ttctctgcct ctcccgagca gctctgagtg ggattgtcag
       61 tgttttatgt atttacacca gcagagaagg cctgggatgg ggactttttt cgtttctctg
      121 agtctcagcg ccacaggggg tatttaactt tctgccctgg ttgctgtaat tctctctcca
      181 gtggatatac agttcagatc aggttcctat tgctgtgatg acaggcattc agcaggcact
      241 gtaattgcag agttaaaaca gctcattttc ttactggcaa gctgtagtta aagaggtgct
      301 aggaggcagc ctggctgtct gcagaggaac tgatcaaagc actgaaaggc atctggcttg
      361 tctctgtttt ctttcaccac cccccttgct gatggagggg aaaaagcgaa tga
//
LOCUS       KCPA01003249             537 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 357908tic ultra-conserved element locus
            uce-1897, sequence.
ACCESSION   KCPA01003249
VERSION     KCPA01003249.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 537)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 537)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="357908tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>537
                     /note="ultra-conserved element locus uce-1897"
BASE COUNT          174 a          107 c          101 g          155 t
ORIGIN      
        1 caaaaaatta ggtgacccta cctctatcgg ttttctcacc gtatgaaata aaatttccat
       61 gtggcacttg tatctgatgc acagcatggt gatttatcaa agatgcaaag agcatgcaga
      121 aacaatcttt attacatcca tttcctgctt gtcagctgag atcatgttgg ctgttcatta
      181 aagaactcat gcaggtgaga ggaatatatc tcgatacctt gatagattgt ccgcttcccc
      241 actgtgacag ccgctggatg gattgagcag cggggaaaat gaagaaaagc gctgactcga
      301 aagctctgct gtcagatata tttttacata ggcaaccatg tcatttcagc taaacaaaca
      361 tcacctcagt ataatgtatt agatataaag ccctaccccc cacttcctca gaaaacaatt
      421 atggggatta tgttcgatga taatgtaaaa atgtaataaa gaattaaaac tgaagagcac
      481 agtgttacag tcttgtttcc gtttttgcat ccattgtgat tacaaataaa gtaacca
//
LOCUS       KCPA01003250             351 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 358014tic ultra-conserved element locus
            uce-2533, sequence.
ACCESSION   KCPA01003250
VERSION     KCPA01003250.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 351)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 351)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="358014tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>351
                     /note="ultra-conserved element locus uce-2533"
BASE COUNT          102 a           94 c           54 g          101 t
ORIGIN      
        1 tggctctgcc attacagtca gcagcggccc acggttctgt cacagcactc tacattccct
       61 ctgtggcttc ccaggtcatc accattcgaa gttgttttga caactaactc acctcctatg
      121 ttgttcttgt aagtattata caactctttt actcttctgt aacggaaagc cagcttcctc
      181 atccagtcaa cccctcctct tacacctgtt ggcagacaaa ggtttgcact acttgcagct
      241 gcatggaagc catcagttgc aaaactgtag gtactgcaaa cacccaaaat acagtaaaaa
      301 taaatacaat gtattcctgt aaatgctcaa attatttcat caaaaataaa a
//
LOCUS       KCPA01003251             377 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 358118tic ultra-conserved element locus
            uce-3938, sequence.
ACCESSION   KCPA01003251
VERSION     KCPA01003251.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 377)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 377)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="358118tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>377
                     /note="ultra-conserved element locus uce-3938"
BASE COUNT          137 a           62 c           70 g          108 t
ORIGIN      
        1 acacattttt atagcttttc ctcaagtaat agaaatgtca gaggaggggg gaaagggagg
       61 cagtttccag tatttgtcag tattataggt tatatataca ggaagaaagt taattaagct
      121 ttaaaaaatc catcacacat caatgggtgc attttaatga gtacaaaaag ttgagatgtt
      181 tactgccaat taaagtggtt tttaaataag cattaattaa cacggaaatt cagaagaaag
      241 ttataccttg tcaaagaaag gccagtgcag tctatgccca cttctgctcc cattcatact
      301 cagatagtaa ttaccaccaa ccctatattt tccataataa tgaggagagg ctgtcatggc
      361 tgtcaaacaa aaacaaa
//
LOCUS       KCPA01003252             708 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 358231tic ultra-conserved element locus
            uce-1898, sequence.
ACCESSION   KCPA01003252
VERSION     KCPA01003252.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 708)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 708)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..708
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="358231tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>708
                     /note="ultra-conserved element locus uce-1898"
BASE COUNT          187 a          178 c          114 g          229 t
ORIGIN      
        1 gtgcagcctg gcggaataac aactttaaaa agtgaagatg tcgctttttt atagctgact
       61 cacatttata taactttgtt aatgcatctg ctccctggaa gttacagtat ctgtgttcag
      121 ctgcgatacc tgcccataaa tcgtggcagc gcggcgaata tcaacagctg cattttacta
      181 tttcaacccg tcagtttaca ctgtctccat cacggcaaat tcctgtcagc tgcactcccg
      241 ctaacacaat tcctatgttt tgcctggcag taaatggacg ctcctgcccc agcatcatct
      301 aaacaactct gttaacattt gcccccgagc gtctctctct ttgtccagtc cctgtcttct
      361 aacagatgtc atccaagtct aatcaagcat aaaatggtca taaatatttc tttctggtag
      421 atttcacatt cgcatttcat gcagggacat gatatttttc tgctacctcc agggagtacc
      481 taatgcaaaa accagttact tacattcaag gctcatgttc ctttagtaaa atgcagcaca
      541 tgttctcagt tcaaagacat aaaaaggctc aagacttttc ttttgtttaa ctgcacttgt
      601 aatatgtgcc acagcttcca tctaggtatg acattgtcct ttgcttctga attttgaccc
      661 tgccactttt tgaatttcct actcccatac cttaattatt gcacaaaa
//
LOCUS       KCPA01003253             489 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 358340tic ultra-conserved element locus
            uce-124, sequence.
ACCESSION   KCPA01003253
VERSION     KCPA01003253.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 489)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 489)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="358340tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>489
                     /note="ultra-conserved element locus uce-124"
BASE COUNT          168 a           77 c          104 g          140 t
ORIGIN      
        1 aattaaagca tttaaaataa tttacactga aattgtatgt gcttgggtct gtcaaaattg
       61 atgctttaat aacatgtcat cccttttttc gattgccctg aaatctgtta aaattaccac
      121 taatctaatt gggaacaaag ttgtcaaatg catgcagctc tgacagtttg tctttctgca
      181 aactgccgac agattgcaag ttacgcatgt gttgagcaga tgggtaagtt aaaaggaaca
      241 caaaaaaaag caatttatta aatcacctgg aaccagcagc tccattccaa aaatagtgag
      301 aatgaaatat agcaagagct aggagagttg gcactggaat atgccagaag gtaccagtta
      361 caaaacaaga taaacatttt gagaagcctc agctgtgttg cagaataatg aggcgttatt
      421 taacccgata tagattacca gcagaaatta atttagggtg cagggttttg tgagagtgtg
      481 tgagtgtgt
//
LOCUS       KCPA01003254             589 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 358450tic ultra-conserved element locus
            uce-2183, sequence.
ACCESSION   KCPA01003254
VERSION     KCPA01003254.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 589)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 589)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="358450tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>589
                     /note="ultra-conserved element locus uce-2183"
BASE COUNT          187 a          105 c          110 g          187 t
ORIGIN      
        1 cagaagctga tagagaccac ccgagcgaca acagcattcc cagcaaaacc ctggattttg
       61 attaaaacca tgaacttaca ggaggagacg atttaggaac tggtccaata aaaaggtggg
      121 agacaaaaag aagatttgga aacatttttt cctccgaata aattgtagtt tgtccctgtc
      181 cagtggactg attcactgtt tctgtgtcct atgggttctt tgttaagcaa gagaagttag
      241 tagttaatta tatcatgaat gtacttgtct gtgtacagtt tctagaacat taaaaagggt
      301 ttgtttgctt agctgtcaac aaggaaaaac ataagggagg cattcaacaa accagttttg
      361 agattaaaaa tcctttcttt tatattttca aacatgccca aaaatgaggc agttggcaaa
      421 cttctcagga caatgaattt ttcccatttt tctttctacg ccacacagtg cattgttttt
      481 tctacctgct tgtcttattt tttagaataa tttagtaaac aagcctccta attttggcat
      541 gaattccctt atttcaaaat gaagacaacc ttgcaaagag attttgagg
//
LOCUS       KCPA01003255             382 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 358554tic ultra-conserved element locus
            uce-4388, sequence.
ACCESSION   KCPA01003255
VERSION     KCPA01003255.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 382)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 382)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="358554tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>382
                     /note="ultra-conserved element locus uce-4388"
BASE COUNT           88 a          110 c          121 g           63 t
ORIGIN      
        1 agtgctggct ctgcagctga gaccccctac acagcacatg gggctgagcc cagaaactgt
       61 gctgttcctt tacgtccacc ccagggacaa acagcagtga ggcagtggct gtgatgagca
      121 gcagacagag aacccagctc tggggttgac actgctgagg ctctggcagt tgtgaccgtg
      181 gggctctctc ctggcagatt atcgccgccc aggaggagat gctgcgcaag gagcgagagc
      241 tggaggaggc aaggaagaag ctggcgatga tccggcagca gcagtacaag ttcctgcctt
      301 cagagctgcg gaacgaggag cagaactgag ccgcacgcgc acagactggc ccacctgcca
      361 cccgcctgct cctatttaag ac
//
LOCUS       KCPA01003256             654 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 358662tic ultra-conserved element locus
            uce-6990, sequence.
ACCESSION   KCPA01003256
VERSION     KCPA01003256.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 654)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 654)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..654
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="358662tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>654
                     /note="ultra-conserved element locus uce-6990"
BASE COUNT          191 a          133 c          130 g          200 t
ORIGIN      
        1 gttcttcctg tgacctgggt tctaacagtg ttactctaag cattttaaaa gatttctgga
       61 gcagaattgg ttaattagtg ctttgtgtta catatgaccc aaccagagat aaaaaggttt
      121 aaaggtctct tgtaaccctg caatgccatt tgtaacacaa aaataacccc ctttcattac
      181 tggcatgcca ctgtagcagg caggttattt tttcccttct ctgcaatgag ggcagctttc
      241 gcatcagaag aattcttggc aaattaatgc gctacctctt gggctaatta aattagaaag
      301 gatcaaaaat acagagcagc ttttgtggtg gacacaatgt tgtgcttcat gcatcttgct
      361 cagagaggaa tttctgccat ttagcccctt tttgcctcta gcagcgttct ggactctcta
      421 acacagtcaa gttcctaatt tgcctcaatg agagagaatt attaactgat aataagaaaa
      481 ggagcattca cagctccagg ctgggctgtg tggaaaaggg tgagctacac agcacctgaa
      541 gcgcatgcaa tttttattaa ttcctgccta aaacaacgca ttcaggagta aaattgctgt
      601 gcaaatgaca aaaacaatta taattttgat tcttcggttc gaactgcttt atct
//
LOCUS       KCPA01003257             564 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 358770tic ultra-conserved element locus
            uce-2561, sequence.
ACCESSION   KCPA01003257
VERSION     KCPA01003257.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 564)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 564)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..564
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="358770tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>564
                     /note="ultra-conserved element locus uce-2561"
BASE COUNT          195 a          114 c           74 g          181 t
ORIGIN      
        1 atctcttata tcctgtggtt taatatttca tatagagtcc cagaagtact ttaattgaac
       61 cttcaatata ttttaccata atctttatgt taacaggact ctacaaaggt tccaggaaag
      121 acatacttat gaaacagaac aagggaacat ataagccatt acagaagatt ggattaaaat
      181 gtacttaccc aggcctctca aatatcatac atctccatta tgtaggcttt aggcaccaag
      241 ccaatggttc ccttcatttc tcctacccac cagccaaatc tattgtactc ctaattgaaa
      301 acaatacgca gtattaacct ttagtctgat ataaatgcaa tagagttttg tatgcaactc
      361 cttatggatg ctttctctta tatacagtta taatcatttc aactgaaaat taaaacattt
      421 tatctttttg ttataggcat tcacatgcag ttaggcaaag gcagaagcta aattttaaaa
      481 aggccaggca tactcaaaaa aatttcttaa ttatgtaaca cctactaaaa gtagccgacc
      541 tccttatcct ctgttcatca aaaa
//
LOCUS       KCPA01003258             666 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 358879tic ultra-conserved element locus
            uce-7678, sequence.
ACCESSION   KCPA01003258
VERSION     KCPA01003258.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 666)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 666)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="358879tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>666
                     /note="ultra-conserved element locus uce-7678"
BASE COUNT          199 a          136 c          147 g          184 t
ORIGIN      
        1 caacaattaa ttttgcagag gaagcagcct gtttaaagat gcctgtggca gtcactaaaa
       61 tatgtgttgt ttttcaaggc caccagacac acagttggct aggttggcta ataaacaaaa
      121 caacagtgcc ccagcctcgt ggggttcgca ggaagaaggg atgagaaata aaatgaataa
      181 tgcttacctg ctaggggtgg gtgaagacta taattgttta gcccccagca gatccctgca
      241 agggttaaaa atgacaaaga tattagttgg tgactgctaa gattgttggt ttgaagcttt
      301 gggcaaaaca cagactgtta tttaccggac ttggtcgatt tacttcttaa tgcaataatg
      361 acctgtgaaa tgaaacgtga gctagacaat tgttcctcat tgtttccagt aaaacatcct
      421 ttcatacccc attaaaccac cattaattcc atttgaaaga gaggcaggca caaaccaagg
      481 gatatctctc tcttttcctt tttcctctcg ggactgatca aggcctgtgg atggaaaagc
      541 tttctcaccc attttagagg gtgttgggca gcctttttga atgaacactg cagagatctg
      601 ctgtactggc acccagcaga ttacattcct gagaaatctg gcaaacagtc aagtgtttat
      661 acacca
//
LOCUS       KCPA01003259             624 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 358990tic ultra-conserved element locus
            uce-3807, sequence.
ACCESSION   KCPA01003259
VERSION     KCPA01003259.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 624)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 624)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="358990tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>624
                     /note="ultra-conserved element locus uce-3807"
BASE COUNT          183 a          140 c          132 g          169 t
ORIGIN      
        1 tctatctcaa gaaacttttc cctgatgcaa aatcctggag gatttggtca ttgtgtctta
       61 tacactgtta aggctcacca ggcaaaagta ggctttctcc ttcacttttc ttttgggtga
      121 ttgaatatga agtccagctc actgcacatc cttatgtgag atagtttaac acggtacctc
      181 gaggctctgt ggtcccagaa tgcagcgcag ctcactggca gtagttcagc tgaagactaa
      241 acatttggct cagtgacagc agagctgcca agagctggca acaagagact cacagggaag
      301 cagcaggctg ctaaaccctt tcacattttt aattagatcc acacacccat gtctttgagc
      361 tatcataaat atacagatga catagagagc attatttggg gtaaggaaaa aaaaaaggct
      421 gtactgtggt atctcttacc ttattaaaat aatttaccta cagctagtct ttggaactgg
      481 ggttgtgaca tttaactcag ataaaagtct ctccctgcct acagttgaat tcaacctgca
      541 cactgaaatg cagggtcctg agatgactga cacaccacct tagctgcaat agcatcgcca
      601 gaagagggca ttattggcag caac
//
LOCUS       KCPA01003260             513 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 359096tic ultra-conserved element locus
            uce-1029, sequence.
ACCESSION   KCPA01003260
VERSION     KCPA01003260.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 513)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 513)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="359096tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>513
                     /note="ultra-conserved element locus uce-1029"
BASE COUNT          207 a           73 c           64 g          169 t
ORIGIN      
        1 aaattggcac aaaaatgtta aacattgttc ccaacactgt tttataagat tattctaatt
       61 tggcttacta aggaaatgag agttttatgg ttagactaat ctcttaataa aactgcagag
      121 catcatgcta ttagtcacac agtgaatttc aaaatttaag agctttatat taaaaactgg
      181 gtaaaggtaa aatgaattga ttgcaattgt aaaattaata cattcccatt ttaattcttc
      241 tgttctacag tccaaggcaa gtataaatgt taacataaca ctgttaaatc aaatctcaat
      301 gcaagagaac cgattgcatc tctactttaa atcttatcaa ctttccaaat tttcatacta
      361 aaatatatta ttgtattaat acaaactaca gtattataca ctacactgtg taataaataa
      421 agaaatataa aaataagaca cataaatata aaagttttct aaaactaaaa aggtacatat
      481 gtcagtaaga agggtattaa tactgccagg ttt
//
LOCUS       KCPA01003261             558 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 359206tic ultra-conserved element locus
            uce-2024, sequence.
ACCESSION   KCPA01003261
VERSION     KCPA01003261.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 558)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 558)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="359206tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>558
                     /note="ultra-conserved element locus uce-2024"
BASE COUNT          183 a          114 c           92 g          169 t
ORIGIN      
        1 attttcatcc ttatgattgt ccttccttga tttctactga cattttagag ccaatgtcgg
       61 ctaataaata gaataacacg ctcataggca caattcagat tcaaatatgt tcctcccact
      121 cccccagcca gtaaatgcaa tttttaccag ctggtgattc ctgaacagcc agtcattttc
      181 atgaatgtgg ctttaacata cagagcatca gcattgaggc agggctggag ctaaaacaaa
      241 gtgttcatac atacatgtat tttgcataaa taaatgaaat aacaagacat aaaaatgact
      301 caaatccggc aactgtgagg caggcccaca cgagtcgaaa cagatgactt ttgttcatgt
      361 agttttcgta caacagtttc acattagtca gaagtgataa aaaataccat ttatatccag
      421 tgcttataac acttacgaaa caacatctgt gagtgtgttt ttttttgtac tacaagcaaa
      481 atcaagtttc agtcctaaag aacagtcctt tgttctccac aagcctgcag aatattattt
      541 tggcatggtc ataaaatt
//
LOCUS       KCPA01003262             467 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 359310tic ultra-conserved element locus
            uce-4035, sequence.
ACCESSION   KCPA01003262
VERSION     KCPA01003262.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 467)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 467)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="359310tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>467
                     /note="ultra-conserved element locus uce-4035"
BASE COUNT          159 a           82 c           86 g          140 t
ORIGIN      
        1 acataaatgt taaatgacag tcacataagg acatatatga aatactaaag atactctaga
       61 aactttctct tgtattttta tttaattgct ttcaacttgt aacaatagaa aagtactggg
      121 ctgtggaaga acagcacttg cctgaacaac agacgatgta tctattatct cacttccatg
      181 aaggtcatcg acctatgaca gttggagtag cagaaacatt agaaatcatg tgcaatttaa
      241 tctttacaca aataaaggaa aagtatcaca atgcctgaat aatgaagagt ctctcggaga
      301 aaaagaaaag tctgtccctg aggatattct tcattttctt tcctgaactg ttccaatgcg
      361 ttcacactat gagagtcact caccgtgctg acacacgtat taatagtatt ttggctggaa
      421 gagtgtagat gttctaaagt gattgcaaag tgcatctgtg actcagt
//
LOCUS       KCPA01003263             781 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 359420tic ultra-conserved element locus
            uce-6233, sequence.
ACCESSION   KCPA01003263
VERSION     KCPA01003263.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 781)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 781)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..781
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="359420tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>781
                     /note="ultra-conserved element locus uce-6233"
BASE COUNT          257 a          159 c          154 g          211 t
ORIGIN      
        1 aaaaattaaa acccattagt tacagaggta aggatcttgc gggttgctct ggacaaaaca
       61 gttaaagaag ttgcaaaaga tgaatctcca atcatacttc ttgaagtgca aaaataaaaa
      121 taccactttt ggtccttaaa taggtgatgt tttacatcac tataacactg caaaaataat
      181 gctgatctaa aaagaagatc ctaaaaactt cctattttac ttacatacag tccagattgg
      241 tcacctaaga gaagcaaaat taaacaatgc taagcatccc aaccccttga agaatgtgct
      301 gctgaaaaat atttttagaa caatcactgt agtaattctt cttagttgta gaaacactcc
      361 aaatcagaaa gtcaattttt cctctatttg cagaagtgtg ctggttttca ctggaaagac
      421 gcctgtgttt tgtttggctg ctgttcatat actgccttgg caggatttcc ttggattgct
      481 tacagtgaac attgctcttg catacagtag cactcccatt ttaaccgtcc cagccacacg
      541 ttttctaata acacacggag agctgcaaaa tccctataag cacagctctt taaagcagca
      601 acagaagggg gtgggggcgg aggaccagag gggggaggct ctgcccgttc aaaatccagc
      661 gctgcaaaca gaggatagtg cttttaaaaa aaaccaatgt gaattgtgtt taaggagcag
      721 ctttccaggg aaagaaacat ctccgagaag attcagctga ttcaccgaat ctgatctgca
      781 c
//
LOCUS       KCPA01003264             613 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 359531tic ultra-conserved element locus
            uce-4430, sequence.
ACCESSION   KCPA01003264
VERSION     KCPA01003264.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 613)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 613)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..613
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="359531tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>613
                     /note="ultra-conserved element locus uce-4430"
BASE COUNT          133 a          120 c          111 g          249 t
ORIGIN      
        1 catttgttta tttcttcatg gtccaaaact gttttatcat gtgtaaccaa actctgtatg
       61 agatatttca ctcctgagaa tacgatgatg gtaggtaact agactctgat ttccactcta
      121 gctgtgggta tttatgttgt caagtggtgt gatgtgaagt gcagaagctg ttctgtcatg
      181 gcaaatacaa acttgatttg tggtcctttg tccttctgtt ttctttttca gttttatttt
      241 tagagcctta cctgtctttt tcccttactt tattctcttt ctgtactttc ttttccccct
      301 aaatacttta cttactagct aagcctggca aacttctgcc tttggtttca atcagtcagg
      361 aaaaaaacag tggaacccac attctaatga taactgaact gggtaagaag tgcctttttg
      421 cttcacatca ctgtcttatg ttgttgttgt gtcatcagct tttcctttat ttatctggct
      481 gtatcagagg gactaccctc atggcactgc tttgaatgtg ttttgtttgt ggttctggtt
      541 gaaattgact gtcttgttct ggtccttctt aatgattttt ttttcacgca gcatcagtaa
      601 acctttgatc aca
//
LOCUS       KCPA01003265             748 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 359642tic ultra-conserved element locus
            uce-2512, sequence.
ACCESSION   KCPA01003265
VERSION     KCPA01003265.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 748)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 748)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..748
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="359642tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>748
                     /note="ultra-conserved element locus uce-2512"
BASE COUNT          224 a          166 c          100 g          258 t
ORIGIN      
        1 tttcctcttt tactctgtgt cattagcaaa ttacaaaatg ctgtgttatt cctattttta
       61 tattaagcat aaataaatgt tagattcacg tcatgaaaga cataaactgc acttgtataa
      121 tctcaatcaa ggaacacatt agaacagaac gtccagcact gtttgctgtc tacttcatag
      181 gcatatattt aattaagtta tgcttctcct aaaattcaaa aagcttaatc tttttctgtc
      241 cttaaattaa actcctggtg ctctacaatg accaaaacaa ataatctatg acctacaaac
      301 aagacacttg cattccctga agatttactt catcttctcc tctaggttat acatctttga
      361 acctctcttt tctgtaacga ccttctggtg ctcattagca tgctgattac cattaacaca
      421 gctataatca agcaattttc ttggtgtatg tcggggagaa gtgctcatca gaatgcagcc
      481 aagggacaaa attaactgca taaatctaca gcacaaactg gatctcatcc aactttagtc
      541 ttcctccttc tgctaggtgt gacatcacca tgatggccta ataagtatcc ccaggttcca
      601 cactatttaa tttacccctt ctctcaattt tacagtttca atgatagctg accaccttgc
      661 agtattttct cttaatatgt gtttgccttt atttctctct cttttaatta gtcatcaagc
      721 tacaggtaca aggattatac aaatgtac
//
LOCUS       KCPA01003266             601 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 359754tic ultra-conserved element locus
            uce-6010, sequence.
ACCESSION   KCPA01003266
VERSION     KCPA01003266.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 601)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 601)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="359754tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>601
                     /note="ultra-conserved element locus uce-6010"
BASE COUNT          126 a          116 c          163 g          196 t
ORIGIN      
        1 agaagttgag agtagggcac aaggtgaaga gcgtgaaatc agctagtgaa aggaaagtgt
       61 tgctgatagt gcttgtctga acttcaaggc cttggtctgc cattttggga gacaaggagt
      121 tagttggggg tggaaagacc agagtttgta ttctttctgc tctgttaccc attgctatct
      181 tcatggatct gacactctgt ttatctgaca gtgcactcag tactgcttcg ccagggaaaa
      241 ttgcacaaaa caagcctggt gcatcagcat tttcattgtg tattaagctg agcctccctt
      301 cacatggtca catccccttt ttaatctggg attccatgtc cctttcccag tccagcctgt
      361 ttctgtggtg tctattgctg gtctccctga gcttctgttt ctgtggtttg agtgtttgtg
      421 tggctgagtg ttaagacctg caggactttt ggaagtggcg ttgtttgggg gttaggcagt
      481 acattgattt agtgttagta gtttgtcata gactgaggtg atggccgcgt tcaagttgga
      541 tttcctccca gagatgatgg tggaccattg ctccttgaat gcaagccctg tgtaagtatt
      601 g
//
LOCUS       KCPA01003267             716 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 359863tic ultra-conserved element locus
            uce-1884, sequence.
ACCESSION   KCPA01003267
VERSION     KCPA01003267.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 716)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 716)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="359863tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>716
                     /note="ultra-conserved element locus uce-1884"
BASE COUNT          244 a          136 c          112 g          224 t
ORIGIN      
        1 catgtaatga ctggaaaatg ttatacccat aaatcatact accacaatca tcaaaatttc
       61 cactcagcca ggacaaattc aacagcattt atgtctttcc agcttttagc ccataaaaaa
      121 tctgtgtttt tggagactgt gttacactgg tgatcttaaa actcccaagt ctggtataat
      181 gagtcctcaa gtgcgttata acttaccagt aattacattt caacatttct gctttcagca
      241 gttagtgttt tattcataaa catttaaaca ctgaattagg cataaaataa gaatgttggc
      301 aacaacccgg cttaatttca ttaactatta ggtaaacgta gtattgcttc ttcaaataat
      361 ccttggtttg aatgctaaag atgtaatgaa cttcatggtt catagcatct gacattgctt
      421 aattaatggg tgcatttata gtacataggc ctcggtaatt gatttatatg catgatttgc
      481 acatacagct gttagttcct gtaggaaagt cataattcaa atgtgtgcat atatacgggg
      541 aaacccacct cacaaacttg tcaagttcat aataacaaac aaatagcact agaaaaataa
      601 ataacatcac taccagaaga aacattagtg tgatcacgtt tccacagctc acacatttca
      661 agtggaaaac atgacaaaat gcttctcagc ctctttacag tagatgtggt taagtc
//
LOCUS       KCPA01003268             568 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 359974tic ultra-conserved element locus
            uce-1468, sequence.
ACCESSION   KCPA01003268
VERSION     KCPA01003268.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 568)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 568)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="359974tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>568
                     /note="ultra-conserved element locus uce-1468"
BASE COUNT          174 a          109 c          104 g          181 t
ORIGIN      
        1 gggcacagca gctgaacgcc aaataaaacc ttgctttgct tctcctctcc ctgtgtctta
       61 cccatcactt ggatctgctc aaactgcttt gctagcgaga tttgtagcca tttgcacaaa
      121 tgctatacgt taagtactaa agccaacatg ttttcttctg ttgcacagaa tcctaatgca
      181 catccacggc cgacctccca agatttagca gggttttggg atatgctgca gttgtccata
      241 gaaaatatta gtatgaaatt tgatgaactt catcagttaa aggccaataa ttggaaacag
      301 atggatcctc atgacaagaa ggtagaacac tgtagatttt gtatgcttca tttaaaaccc
      361 tgcacaaata ctggacagat taaataggcc tctgtgttac agcgttgaca ttaaaaatga
      421 agctcatatc aagttaattt cattgtaata acaatgttta cataataatc atctgggata
      481 ttatctgtaa tatgtttcag gcatattttt aaaccaaatc tgtctttgtg aatcggataa
      541 tgggaatgtg gtactttgtt aagcttta
//
LOCUS       KCPA01003269             624 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 360084tic ultra-conserved element locus
            uce-4348, sequence.
ACCESSION   KCPA01003269
VERSION     KCPA01003269.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 624)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 624)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="360084tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>624
                     /note="ultra-conserved element locus uce-4348"
BASE COUNT          194 a          126 c          128 g          176 t
ORIGIN      
        1 ggaggacatc tctgtccagg ttatactgga gaaaggctct tcatcaagta acaggggtga
       61 tcaaagtgtg gcagttgtac cttatctatt ggggatcata attcaggaat ggagctgccc
      121 tccagttcgc tcctccccac cattaaacta cattcaatca ccgcagggag aatgcagccc
      181 atgcgctcgc agccagatgt tatcattaca ggccttttct tataaactgg tgctgaaacc
      241 cgagtggttg atgagactag ctaagcagtt gtacctttga cctgattgca ttaaacttgc
      301 cctatcaatt taagcttagt ataaacacca tttcccagag tccctcatga cttcagtagt
      361 gagaagaagc tgactaagcc taaacatttt ttaacagcaa tcttgtctta caacaccaag
      421 gggatttgcc atgtatctgg ggctttataa aaccatatga acatgctgaa agaattaaag
      481 tcctttaaaa aagcaaaatt gatggtgaca gtccttttag aaaatcagtt tgtagaatgt
      541 cagcacaaga ggagctggaa ataggactaa aatagttttt aaaaatacaa tagatttgtg
      601 tttgtttcac accgtatact ggaa
//
LOCUS       KCPA01003270             624 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 360294tic ultra-conserved element locus
            uce-7351, sequence.
ACCESSION   KCPA01003270
VERSION     KCPA01003270.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 624)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 624)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="360294tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>624
                     /note="ultra-conserved element locus uce-7351"
BASE COUNT          204 a          108 c          127 g          185 t
ORIGIN      
        1 gagatgcctt gttgtctggg atggataata aggcaactct gtctaatctt ggagaacaat
       61 caacccatct tgagaaggtg actgactacg tatgctcttg ccctgacagt gctagaacaa
      121 tgcccccata atgcacttga ctcagctggt aataaaatct acttttgatt agcagccatg
      181 gcttgtgtca atcactgcat gatgtaccat tgtcctctgg tcctgaacac agtttattta
      241 cagggaaaca aaagcttttt ggatatggct gctgcccaga gattgcaaaa tagattgagc
      301 tgtcagcctc acacactaga tgaagattaa tgagttgtgc agacaataaa tatgaagcaa
      361 tgaccataaa tatgctaata ggtattatcc atatacacta taattgctac aaaaattaaa
      421 aagtagtgta aaggaagtag gtcagagggt gacagacaga taatcttgga tgctgaagat
      481 ctttggttca gtcagattct ctacaggttt atttccttca attagaccct tcaaaagatt
      541 aattgtttaa aagctgtttg aataatctct tttgaaacag aggtttatgg gaaaatgttt
      601 atgaaaaagt gacttcaatg aaca
//
LOCUS       KCPA01003271             616 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 360402tic ultra-conserved element locus
            uce-6915, sequence.
ACCESSION   KCPA01003271
VERSION     KCPA01003271.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 616)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 616)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="360402tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>616
                     /note="ultra-conserved element locus uce-6915"
BASE COUNT          227 a           97 c          111 g          181 t
ORIGIN      
        1 ccacatggta tctattaaat ttataaaagc ctatccatta aatagttctg ccccagagaa
       61 acaagttaat tactaaataa tttcaatgaa aagtgcaata ctagcataaa tcacattaaa
      121 tcatatttaa tggaccatag tggaagaatt aagaaatttt tttccacaga aatagtttgt
      181 tagaacatat ggaaaaatga aaacactgtt tagtgtttga gataaaaaca atcaaaggta
      241 atcctttaaa attagggttc agattagtct ctgcaaagga tgctgtttaa ctgaaacatc
      301 tggtagtgtt acgttgagag acaggccttt tttaactttg gaaatgagat tagtagatca
      361 gttatttgta agtgtccaag taatttctaa ttattttatc tgggtcacag ataatccgct
      421 tttacagggc tcccacaatg acatcagagg atcactgttg aactgattat cctgttacct
      481 tccaccatcc atgggaagac cagattgaaa gagaaagaag tggctgattg cttcagacag
      541 gtggcagcca acaaaataaa gaacatcaca gatcttgaga ggaagaaaat ctcatacatg
      601 gaaaacagct tttaaa
//
LOCUS       KCPA01003272             521 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 360509tic ultra-conserved element locus
            uce-6232, sequence.
ACCESSION   KCPA01003272
VERSION     KCPA01003272.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 521)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 521)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..521
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="360509tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>521
                     /note="ultra-conserved element locus uce-6232"
BASE COUNT          185 a           92 c           98 g          146 t
ORIGIN      
        1 tggtacttag attttgtctt caagaaaagt caccttgact ttaagaacta aacaagtcct
       61 gaatgagctg ctaattatga tgcatctctg actgaaagaa acactcttct gttcacataa
      121 gttcttcccc ccactccccc taaacagagt tggttggtca agttgatctc ttgtttgaaa
      181 ttcaatcaag ggcattaaag tgtaaaccag ttggaaaaac aaattgctta gggaaataat
      241 ttgcttaaac aacaacaaac aagcactggt aatcttctta cagaaattaa tgaagggaaa
      301 accccctcag cttgggtgga taatgatcct tagctatcat gtaacaagcc tagaaggttt
      361 agggagaagg tgaaaattaa gaaagctgga ttaaactgaa cttccaaagg aacaaaaaga
      421 aattcaggat aaagatcagt tctcccactt tgagattgaa aagtagttct gaactggaaa
      481 gagcctaatc ctttatgcaa atctggttta aagttaagtt t
//
LOCUS       KCPA01003273             708 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 360621tic ultra-conserved element locus
            uce-3304, sequence.
ACCESSION   KCPA01003273
VERSION     KCPA01003273.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 708)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 708)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..708
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="360621tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>708
                     /note="ultra-conserved element locus uce-3304"
BASE COUNT          241 a          126 c          155 g          186 t
ORIGIN      
        1 gtttttattg cttggctgca atgtcaaaat tgggttggtt taaaatattt atgacatgag
       61 agaaagaaaa tctgtgaatt actcagaact taatgtacat actcttaatg tatttcacat
      121 tttctttagt tggggacagc agagtgggga attgaggata acttgtttac tgccaaacag
      181 gtctccgtag tacctagttt tcctatgtat taaaaaccgt gcctggggcc aagaatcctg
      241 gggttggaat taaagacaag aacacacaat aactgtaagt aatggcagag agatttaaat
      301 agcacacatc agcagaaaag aatggggaaa cctacagtac actgacttca ttgatacccc
      361 atttatcagc aattactgac tccattaaag gcagagttta cagcagacag agaaacagag
      421 cctaaaatat gtcccaacag atggacagag agtgtcagtg atgccgtatt tcaaaggcat
      481 ctgcaacttt gttatcattg tacatggagt cagaaagaca gtgaaaaaca ctggagtaag
      541 ggccagcaaa tgatttactt gaccccgcat gggcagaact gacagcaaaa acctcattaa
      601 ttcctcaggt cattctggaa gacattaatt tggtttggac tcgggacgag aggagatttt
      661 ccagacatac accaggaatt atgaaatctc tatagccaga ggaaagta
//
LOCUS       KCPA01003274             408 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 360731tic ultra-conserved element locus
            uce-5263, sequence.
ACCESSION   KCPA01003274
VERSION     KCPA01003274.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 408)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 408)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="360731tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>408
                     /note="ultra-conserved element locus uce-5263"
BASE COUNT          138 a           71 c           81 g          118 t
ORIGIN      
        1 gtggaacaga attaagaatt aactctgtag cagacccctg cttatcagca accttgctat
       61 tactatacca accctgatgt gcataagcaa tattttcatc cacttcccaa gagatttatc
      121 tagctgttga agtagaaaat gaatatttta cagttcactt gtctgatcaa ttacctacaa
      181 gctgctgcag tattttatag ccagtgggag agctgtgtag gtgatgatag agaaatctgg
      241 agggaatctg ttagccaact acaaaaaggg gtctaaaact gtgaatgagc catcagtaac
      301 aatcttttgt tcataagggt ctagccagaa attacagtgt aaccaattaa agtacataaa
      361 tgataatcag cagaatgtga attccagagt gaagaaattt gattgctt
//
LOCUS       KCPA01003275             528 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 360838tic ultra-conserved element locus
            uce-2230, sequence.
ACCESSION   KCPA01003275
VERSION     KCPA01003275.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 528)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 528)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="360838tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>528
                     /note="ultra-conserved element locus uce-2230"
BASE COUNT          181 a           72 c           81 g          194 t
ORIGIN      
        1 agacattctg gtttaatgtt tctctgactc tttaagctct gattctttaa acttgtttga
       61 gtttaggcca actaaactac ttcaggaatt gatctctaag aaggaaaaca tctgagaaca
      121 tgtaagttat aagtggctgt cttatcttta ttacaaaata ttgtaacaaa ttcaatatcc
      181 tagtcttcat ttgtatgaat ggtttgtatt gtacataatt taaccagtgt taattgagct
      241 gcttattaat attaacttgt aattgtctct ctgcttgtta ttggttaaaa caatcaagga
      301 aatgaggaat ccattttatc aatgtagctg taaactccat taaaagacag aactatgtac
      361 aaagcattta ttcagctaaa gtattgttga aagctataca tatacaacat tacagtctgt
      421 ctgtatttag atattttatt tccagaggaa aaaatgaact gtacataaaa ataaaatctt
      481 aaagttgagt ttcaatatgt actgtgtaga tagtagttca aatagttc
//
LOCUS       KCPA01003276             427 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 360942tic ultra-conserved element locus
            uce-828, sequence.
ACCESSION   KCPA01003276
VERSION     KCPA01003276.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 427)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 427)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..427
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="360942tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>427
                     /note="ultra-conserved element locus uce-828"
BASE COUNT          132 a           78 c           58 g          159 t
ORIGIN      
        1 aaaattaact tttctcccat ttacgtaatg catataacta aacttctttc ctactgtgag
       61 acagtttcat ttattgttat ttgtaaacag cttagtaaag atgcatagtg gattggtcta
      121 gaaactcctt gaacagtttc ttttgaaata acactacata cgttaagctc aattacacat
      181 ccaaacagcc acaacacact tttggtaatt tattcattga tttaacatag tacccagaag
      241 agtcatgcct gctgtcaatt ttgtaatata ttatgtttta aatatactca tgctcaccca
      301 tgcacgccat taaggtgtgc ataaacctgt gtttttctct cttgacagct ataaatgttt
      361 gttattatta cacaaaacat atgttcatgt tgtttttgtc taaattattc tatctggggc
      421 tataaag
//
LOCUS       KCPA01003277             412 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 361047tic ultra-conserved element locus
            uce-5816, sequence.
ACCESSION   KCPA01003277
VERSION     KCPA01003277.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 412)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 412)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="361047tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>412
                     /note="ultra-conserved element locus uce-5816"
BASE COUNT          122 a           74 c           74 g          142 t
ORIGIN      
        1 tttaaggttg cccatatccc aatcggccag agcagcagga ctgctgctct caataagcat
       61 aaaaaattaa caaagtcgcc caagagttaa tcgctttttg atggtttgtt ttatttctgt
      121 tttgtaacaa atggctgaaa tcaattaaac tgctttactc tcaactgatg aagttaatta
      181 tgatttgtta tggtatctga tatgtaaatt attagaaagc agacttacat tcgatcgact
      241 gcctgcgggc ggtactggat taatcattgt gtagatgttg tcacttgaat ttgttgaatc
      301 tgtggaacag tgaagcccag taagtcgggt gattaattca tttcttaatt aaaacaaact
      361 catgccactt gaactcattc ttttgtattt tatcacccaa aattccctct aa
//
LOCUS       KCPA01003278             762 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 361158tic ultra-conserved element locus
            uce-2389, sequence.
ACCESSION   KCPA01003278
VERSION     KCPA01003278.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 762)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 762)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..762
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="361158tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>762
                     /note="ultra-conserved element locus uce-2389"
BASE COUNT          242 a          168 c          139 g          213 t
ORIGIN      
        1 aaaataaggc tgttattgta tgacttttaa agtgctcatg tagattaata ttctcaccct
       61 ttaacatact tagacacatc agcgtgaaca cagaaatgca acaagttgaa aattcaaagt
      121 acatttacta gtgtatttta tgccactcac attttcagtc agaccaccca gagcaaagaa
      181 aagaaaaagc cacaacaaaa aaagccctct gcattgtttg caatggaaat tgagtgtata
      241 ttctcttctt cctgtatttt ccagctagat taagctgttg tcttcacaat tgcctcccag
      301 ctgctgtgac ttgtgaaaac aacagaccct gctctgttgt ctgcagaaag cctggattgt
      361 tatgagtaac tttattgcag gcacatgagt gtgttaagac tttaaaacac gctcaaatgt
      421 catgtgcaca cccagtgacg ggcaagaata attatgaaaa aacaagaatt ctatgtctac
      481 gaaacagtgt cagacaaaat gggccattca ttgtgttcct ttgggaatgc ttggactctc
      541 cagccagaaa acaaaaaagg cacttttttc ctgccgtagg ctgaatactt agctttgcca
      601 tctgagccct aagaaaacat gggccccctc tctaactact ggctggcccg cacacagtaa
      661 aaagtattaa tgtccccctt ttttccagca gttccctctg tgtaggctgc ggccaatgta
      721 aagtcaatgc aaagacaaaa cagtttgcct aacattagta aa
//
LOCUS       KCPA01003279             631 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 361266tic ultra-conserved element locus
            uce-4097, sequence.
ACCESSION   KCPA01003279
VERSION     KCPA01003279.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 631)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 631)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="361266tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>631
                     /note="ultra-conserved element locus uce-4097"
BASE COUNT          213 a          118 c          121 g          179 t
ORIGIN      
        1 tctgtgagca cagatttacc agtatggtgg aaatcagagc tcttttgagg tttttttctg
       61 cagtgtattc aaagtgatca taaatcaagt cttgaattca aagacaatta aggacatagg
      121 cagtagactg agcaatgcta acccaaaact ccaatcattt ttaaagtaag tggggagaac
      181 actggtcaac taggcgattg ttggtatccc ccaaaatgta atctccaagc tgaagaatgg
      241 cagctggcag aacagctggt gaataggatt aatgtcagaa gaaagaaata aaactcaaca
      301 tatgtccaag cctgcggtgc tgggactgag catgattgta ccccgacgga taccatgtgt
      361 acagctggaa agtgccactg tgccatgctt ctctacccca caaggtcatt tctaagaagt
      421 atagctaata tctgttttcc ttgagaactc tggctgatta agcttcacag tgtaaatatt
      481 ttggccgatt taataataca atctcaacta aaaagcagat tagtattaaa aaggacagat
      541 tgcactaatg taaatataat tttaaagcta tttaaacctt ttaatctcat ctcattcaga
      601 tttccacatt caaggttcaa ataataccaa a
//
LOCUS       KCPA01003280             625 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 361378tic ultra-conserved element locus
            uce-5601, sequence.
ACCESSION   KCPA01003280
VERSION     KCPA01003280.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 625)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 625)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..625
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="361378tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>625
                     /note="ultra-conserved element locus uce-5601"
BASE COUNT          155 a          143 c          118 g          209 t
ORIGIN      
        1 ctctctgatt aatgatggtg tgctgtcact gtgtcatttt ccttaccctt gtagtgggat
       61 accatgcaat tagagactga tgtcagcctg taaaactttg gtgtaaaatt ttggtcgcac
      121 caaaatacca tacttcttaa caaagctggc agacatgtcc tttggcagca gctgcttgcc
      181 atgtgattta aaacttcctg tcactataat tgatgtgttt ttattctttc cacttcctga
      241 agcctgatca gaattaaaat tgctgttgga atttcctgtc aaagcaactc atttattcgc
      301 cgagcgctgc actgacagta ctttgattgg acattgcctt cagctattct cgggcagagg
      361 gattgctgtg aattatgctc cttgcccagg tttgacttcc ctgcctgcca catctgcaaa
      421 tatatacagg ttgtccatca tgtggtaacc ttgtcctaat gaaaactcca cgtgtaaaat
      481 gttagatttg aatatcaaac ttggccacct gctggggccc tggcttttgt gtttatttag
      541 gaaacccctg aattcttcaa ctgattgtct caccgtaact ttcacattac ctaccaaaaa
      601 gagctctgct atatttctac actga
//
LOCUS       KCPA01003281             395 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 361484tic ultra-conserved element locus
            uce-1041, sequence.
ACCESSION   KCPA01003281
VERSION     KCPA01003281.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 395)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 395)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="361484tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>395
                     /note="ultra-conserved element locus uce-1041"
BASE COUNT          135 a           73 c           59 g          128 t
ORIGIN      
        1 ttttgatcct gaaaatctgt agccgtgtca agagctcctt cttaattata ccatattctt
       61 tacatctgtc ctgctaaata actctaattg aaatagcacc ggcgtgaatt ttcgtaatgt
      121 tccccccaag acatcccgaa agtgactcac acgagaaaac agactgaagt cacagctgga
      181 agcacgtcaa ggatcatttc catttttaca tgattaattt gaatttaata tcttaaatca
      241 aaacctgatt aatttaaata aaattttgat ggtgccctgc ttctaatata cattgcagta
      301 attagattca gcttaatgtg atttttttac ataattaaaa aaaagagcaa gtcaagtgta
      361 acaatgcaga gttggtacaa atctgtccat atata
//
LOCUS       KCPA01003282             583 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 361592tic ultra-conserved element locus
            uce-7816, sequence.
ACCESSION   KCPA01003282
VERSION     KCPA01003282.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 583)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 583)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..583
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="361592tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>583
                     /note="ultra-conserved element locus uce-7816"
BASE COUNT          190 a          114 c           91 g          188 t
ORIGIN      
        1 ttactcaagg atttaggaga aagcaatttg aatatgtaca tcttatccaa taaatactga
       61 gtataatgca aacatcttaa agggtagaca tcaaatagtt ttgtagcttg attcaaagag
      121 catgtacatt cacctcttaa tttgtttact cagagctgta ccactaactc atcagataaa
      181 caagtacatc ccaccaggca gtgtcagttc ttagcaggtg tgcctgaagg actcttcctt
      241 tctgctcttt gaatcattct gtagacacta atgagcatcc ctctttagct ttaattattg
      301 gtccctgaca agtcaacata ataggaatca gcttaaccaa gcatactccc cagtgacatg
      361 ttcaattact caggttgtac ttctctgcaa gaggtctgag gggttgctaa tttaacaaaa
      421 aaataaacag aagtattggt tacagtttat cttttgaccc ttatgtcatc aaatctagca
      481 agatacctcc tcctggaccg gagcagaaga ttaaataatt caaaattact attctgtttt
      541 tactttttaa ataaaattaa ttactaccta aagtgattta cat
//
LOCUS       KCPA01003283             622 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 361701tic ultra-conserved element locus
            uce-889, sequence.
ACCESSION   KCPA01003283
VERSION     KCPA01003283.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 622)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 622)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="361701tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>622
                     /note="ultra-conserved element locus uce-889"
BASE COUNT          181 a          107 c          134 g          200 t
ORIGIN      
        1 aaggacagct gggaggatgt gagtgaaagc aggtacggct ctcattaact tagccctgta
       61 gaggggacac tgtgcatatg taaagcacta gcaaatggag attgaatttc aactactgtt
      121 gatttggtat tcaaaaaaaa tactgtcaga tcctttgaaa tatcttggga ggtcttgttc
      181 tgagcttatt gactgaaatt tgcatgcgaa attagccaca actgcatgag tatttgaata
      241 ggtgccagga aacccaaaag aaggcaatgc ttgatttctt ccagtgatgc tattttcatg
      301 cagtcatgag gcttgaaatt gacagtttgg caggttgatt taatttgctg gccttttgca
      361 tattcaccac tgacagctaa ggattcccag gcaggcctag taagtcggtt tagttatctt
      421 gtgacatgcc gacccgggag gagaattttt tccccttaat ttagttagat aaattttgaa
      481 tgacccattt cagcttgcta gcagatgtct acaagctgtt taacatcctt taaattaaga
      541 accatccaca ctaattattt catgtatgtt ttatgcagtc attgtagtaa ctttaattga
      601 atgatggtta aaaatcagtt ct
//
LOCUS       KCPA01003284             576 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 361812tic ultra-conserved element locus
            uce-2623, sequence.
ACCESSION   KCPA01003284
VERSION     KCPA01003284.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 576)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 576)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="361812tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>576
                     /note="ultra-conserved element locus uce-2623"
BASE COUNT          155 a          114 c          123 g          184 t
ORIGIN      
        1 ctgaacagaa ggtgtttagt cttaatgctg gcttcatttc aacaaatcga gtgagtatgt
       61 ttcagacaac tttgtaaatc acaatctgaa cacaaaccgt cacatttcac ttctcatgag
      121 gttcagtatg gagataggac atttgcagta agatcaaaca caagagaaaa ggacaagtgg
      181 ttgcatttta ttgtgaccag ggttgaaccc ttctatttac agttgtggac taagaaaata
      241 ttttcctcat cacagttgaa gagagaccct gacagggctt tcctgcttgc catatcccat
      301 gtcatcagtg ttttctggga gaagaatttg aggtggtttt ccacctaagt ggttacagct
      361 gtttccacag gatcagtcag atggagtttc tgcctctgtt tattttggct ccgattttcg
      421 gctggagccc agcaggatga cagtgtttgc tcagggtctt gggactttgg acaaacattc
      481 cagaatttct gacttcttaa cattaatgtt tgatgaattc tgctcttaat ttcttctgga
      541 aaaatgtcaa gcccactgcc ttagtcttac aacagt
//
LOCUS       KCPA01003285             462 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 361913tic ultra-conserved element locus
            uce-5035, sequence.
ACCESSION   KCPA01003285
VERSION     KCPA01003285.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 462)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 462)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="361913tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>462
                     /note="ultra-conserved element locus uce-5035"
BASE COUNT          168 a           83 c           71 g          140 t
ORIGIN      
        1 aattgtatgg gaagcctcat attcaaatac ttctacaaaa tatatgtcat gctagaaaat
       61 attctattgt caatccaaat agaatacaaa ctaaaatgag ataattggga aggtgcccat
      121 aaagtcagcc tgaatatatt atcacaagta tatgtgagat aatatttgtt ttaaaaagat
      181 tctatggcac tgtaaactca gtctcattag agactgcatt taaaaggctt ataaagttac
      241 tcattaatgt tatcttgttg tatctccaca gctttttcat taaagaaaat tcagcagaaa
      301 gcattttctc ctgatagcag gaaccaattt gcaataaatg ttctggaaac cactagggaa
      361 gccattactg aggtctaata aaaacagaca agcgtaactt gttctatatt tttgtttcaa
      421 tcacatacag atgagacccc gctctccaca ccaaccgcaa ga
//
LOCUS       KCPA01003286             731 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 362024tic ultra-conserved element locus
            uce-7277, sequence.
ACCESSION   KCPA01003286
VERSION     KCPA01003286.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 731)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 731)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..731
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="362024tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>731
                     /note="ultra-conserved element locus uce-7277"
BASE COUNT          222 a          151 c          140 g          218 t
ORIGIN      
        1 ttgccataat caaataaggc tgcagtgctt atattctaat taaaaaataa tctctgatat
       61 ttaatttaga aacctggaag actgtaccag caaaattatg gctacaacct gcatcaacca
      121 ctcgatttac ccacagacag caaaaaaatt agtattaaac aagcaaacgc tgcactgctc
      181 gatatgtatt aaaacaagta ttgtacccag ttattaattt gcactattca cttttaaatg
      241 cagcaaatac ctcattaatt taattttagg tgcccaccag tttatattgc attttacagt
      301 ctagaaggca atttactatt aactggcaat tacatacaga atgattgtta attctgctcc
      361 taagtgctag ctgcttgaaa attgttatct ctctctaatt tttgaccttc ttacaacagg
      421 ggtgaggtac actgggaata caaaggacta gtagagaaga gccggacatg tcatttgtga
      481 ctcattcttt taattcaccg tgctaatcaa ctgaactgcc acaatctccc aaggtaattg
      541 tatctttata atagttgaaa gcagcgggca aaaaggcatg gatagatggg gaaaggcctt
      601 gcccctgctg ggagcagcgt gctcctgctt ctgcgccggg ctaatggggg cttcggagaa
      661 aaatctggaa ctttcgcatc tccctggcct ggtggtttag tgtctcaact tctgcgctca
      721 caaaggcttt g
//
LOCUS       KCPA01003287             354 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 362123tic ultra-conserved element locus
            uce-3755, sequence.
ACCESSION   KCPA01003287
VERSION     KCPA01003287.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 354)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 354)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="362123tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>354
                     /note="ultra-conserved element locus uce-3755"
BASE COUNT          125 a           48 c           71 g          110 t
ORIGIN      
        1 aaaaactgat gatgtcaaga gggagcaagt tgtgatgaaa accaattgtc ttcctcaaaa
       61 attaagctac tctttttctt cttgttttaa atctagagta aaagaaatgt ttaggtaagg
      121 tttatcttga atcttaattg ccttaatttt aaggacgtca aaggctctca aggcaagctg
      181 tcaacgtctt gttaaaaaac ccgagaatga attgaaactg ctcacaccgg tgctggtgca
      241 gaagtttaat agactgagtt tttaaaaaat aaactgtaca gtttaaaaga aaatgatttt
      301 cttcttttga agaaaagttg atgataaagg aactgtggca actgaaagga ttgg
//
LOCUS       KCPA01003288             597 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 362230tic ultra-conserved element locus
            uce-6136, sequence.
ACCESSION   KCPA01003288
VERSION     KCPA01003288.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 597)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 597)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..597
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="362230tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>597
                     /note="ultra-conserved element locus uce-6136"
BASE COUNT          160 a          160 c          127 g          150 t
ORIGIN      
        1 cggccccggt ggcgcggtcc cctccgagcg acgcgccacc acatctgagc gccaggcaac
       61 tggttttgtc acttgcttta agacgcatcc tgcctggtct ctcttgtttc attacccgaa
      121 atcccagaga aaccacccgg caggatcaat cagtcacagg cagccagaca gttttcttgt
      181 actttattaa agtgtaatca aacatcggtt aagtggaaaa taaatatcca gatctaataa
      241 gctgctcagt cagatcgtgt aaatgcaaat tacaagctgg ttcccatctc cccgccgggg
      301 gactgaacaa gccacagcaa ttgcttcatc caccgcgatt gtaaatcaac taaaataatg
      361 gctggataat gaccagtttg cggtttcaag cagattgaat gataacaaac tgcgtgtgtc
      421 gcaccagctt ttcatttagc atctcatcat ggagcgagca gctcgcctaa cagcttggct
      481 gcctcattag gttgttgtct gcggcttgta aattcaggct gcagccagca gattacctga
      541 caaagttcct gatagggaaa aactagacaa ttcaatccag tccttcaatc cctccct
//
LOCUS       KCPA01003289             603 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 362342tic ultra-conserved element locus
            uce-1085, sequence.
ACCESSION   KCPA01003289
VERSION     KCPA01003289.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 603)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 603)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="362342tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>603
                     /note="ultra-conserved element locus uce-1085"
BASE COUNT          160 a          131 c          133 g          179 t
ORIGIN      
        1 ttccctttgc tttctgcttc ctgacatttc aaaaatgtcc tgccgtagcc tcaggaaaat
       61 aactgagcga ataacttaaa aatatccagg attgctccag ttaaggaatt agcctgcctt
      121 gcctgtgcaa taaagctctg tcagccctgc cctccttgct cgagttttaa ttctagtctc
      181 taatctcagg cgctcctgtg ataaattaat tgtaatgata gaggccccag ttacgaggtc
      241 tgcaccgttt gcttgtaatc tgagcgacag gtttagggcc tgctttattt aagatgcgag
      301 ggtaattaca tgggagttag catatgcagg cagggagata tgattcattc tcccagcgac
      361 ggccatgaca cagctgtttg tcggataaaa tagaggaacc gtgttgttac aaaatgttcc
      421 ccttattata cctcattaaa aacaaggctg cgataagtca ggcctggcaa tgaataaaat
      481 gtattgcccc ctgtaaaagc tgataggaga gaaagagggt cttccgagca agcttgggtc
      541 atttatttat ttttttttca cgctccctct tctgtctctc actgactgcg ggaggaaaga
      601 aat
//
LOCUS       KCPA01003290             365 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 362445tic ultra-conserved element locus
            uce-2135, sequence.
ACCESSION   KCPA01003290
VERSION     KCPA01003290.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 365)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 365)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="362445tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>365
                     /note="ultra-conserved element locus uce-2135"
BASE COUNT          128 a           59 c           38 g          140 t
ORIGIN      
        1 aactaaaaca agtaatttct ttttttttta attaactgct ctaattaaca aggaaaccat
       61 cctccccctg aattagttta tctaattttc atctttattc aaagcaaaat gacaatgatt
      121 aattgaaaat ttaataagca gtaattatta acttggcaaa cctagtacca attaacactc
      181 tattaaaact aattatgaca tgtttcattc aagtgtttgc acttaattgt ttcatgcact
      241 taaaacccac cttaattaaa tgttctgttt aattaaagcc acagatttct ataaaaatat
      301 tttactgtag attaaaatca atggtgttat ttgagtttta gtctgcgtat ttagcccatg
      361 tactt
//
LOCUS       KCPA01003291             360 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 362547tic ultra-conserved element locus
            uce-5786, sequence.
ACCESSION   KCPA01003291
VERSION     KCPA01003291.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 360)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 360)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..360
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="362547tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>360
                     /note="ultra-conserved element locus uce-5786"
BASE COUNT          120 a           59 c           79 g          102 t
ORIGIN      
        1 aaaagccatg taaatagcaa agaaaatgtg agtctgtgtc ccttctgatt tcaggtaggg
       61 agtagaagat ggagtaagag gagctgagct tgtgcttgat ttgcagagta gcgtgatggt
      121 cggttgggct gcgttggcag catggacctg tgccagactt caccacaatt catactgtgt
      181 cagtttaata aatgcactac ttaaattatg aaattacaaa agaaaaaaga gaatgcactt
      241 attcagactc ttaatacatt aaaaataagg cattaaaaca ctgccttttt tttttccttc
      301 cagaatcaat aatgaacagg aagggttgta gacattaaca gtcatggaca ttcaagctct
//
LOCUS       KCPA01003292             521 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 362654tic ultra-conserved element locus
            uce-3605, sequence.
ACCESSION   KCPA01003292
VERSION     KCPA01003292.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 521)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 521)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..521
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="362654tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>521
                     /note="ultra-conserved element locus uce-3605"
BASE COUNT          172 a           96 c          104 g          149 t
ORIGIN      
        1 taaataataa atatttggaa gaatatacta tttccaccga ttgtacttaa aagctcaaaa
       61 attcaatttc atgcacagag ctgctctgaa agccacattg aatatattgc ctttgtttgt
      121 ttaggttatg cgcaaataaa tattgggatg acagttaaag acacatcctt gaagtagtct
      181 acccaataaa tttggaaaga ggaagaggaa ttccagctgt ataagattct ctttgttgcc
      241 tgcttgttaa ggaatccttc tggcacaact gaggggatta tgaattcaca tgtgaattta
      301 tcccctatta aacttttagt gaaagggtca gttagcagga atgataaagc tcaagcacac
      361 cagtcacatg ctggcagagc atctgtgact ggctctactc aggcatatcc ctggtttata
      421 gctttaacat agagaggaag ctacaggggc gggcaaaaaa cagcccactt ctgaaaacat
      481 tagaaatagt gcaaagtaca gttccacagg tcacactttt t
//
LOCUS       KCPA01003293             542 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 362764tic ultra-conserved element locus
            uce-3077, sequence.
ACCESSION   KCPA01003293
VERSION     KCPA01003293.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 542)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 542)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="362764tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>542
                     /note="ultra-conserved element locus uce-3077"
BASE COUNT          164 a           98 c          103 g          177 t
ORIGIN      
        1 ggctgtacag agcacatctc cggttagtgg tgcatttgga agtagctgat ttccctacac
       61 ccaagaacct ttgagaattt aaatattatt tctgcttaag agtaaactgc tcatcatcac
      121 cctagtttga ctaaagattt aagctgaagt acgtgagcag catagaatac atttcttgct
      181 cagaaacaca aacagctagc caggctgtaa gtatattatc aggcaagttc tttcagaaac
      241 gtattgctaa agaagcttaa cattaattat tgtaactttg ggaagattac atccacacta
      301 gccttgtaag aagcagcata cacttcttga cctccaatgc tagagcttta agacacaaga
      361 atggcatttt accaacttta atgggataac cagtattaat ctttcagcag taagggaaga
      421 aaaagtgttt agagtataat acccttctga gttctgatag aggctgcctg ttgtgtgtac
      481 tgcagtcata attcatttgt ttctctctgt tgttttggtt ttgttttctt aattatttaa
      541 gg
//
LOCUS       KCPA01003294             831 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 362878tic ultra-conserved element locus
            uce-249, sequence.
ACCESSION   KCPA01003294
VERSION     KCPA01003294.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 831)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 831)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..831
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="362878tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>831
                     /note="ultra-conserved element locus uce-249"
BASE COUNT          242 a          195 c          170 g          224 t
ORIGIN      
        1 gctagtgacc agagaaatgc ataccagctc cactggggaa atctgtgctg caacccttaa
       61 tgcttcctga catctctacc aggtcctctc cgtaggtgac cccaccatga caatcccggc
      121 tggcccgtca gtcgtgggcg agcagaaggg aggtaacgtg ggcagtgtct gtgccacaga
      181 aatctcttaa aatgtcattt gtagagggaa acaaaattgt tgcaagagca atagaagctg
      241 tgaaaaaatg ggagctccta aagcctttaa cgcagtagaa aatttatgaa aacatgaata
      301 aaaggtaact tattcagtgt cagccttaca tatttatagt ttaaaaatta gtcaaagttt
      361 atgtcctgag gttgcaccta caggaagcca gatgtgtgcc ttctgcatgt gacctaagac
      421 aggcctgaag caacaactag ataatttctc gctcatactc cacaccgtcg atcgcggcgg
      481 ctttctgagg tgagagaatc tgacagcact aactctccag ggcagaactt tccagtcaag
      541 tggatcaacg gactgaaaat ctcttatgaa tagtcattag gccttcatta caaacccctc
      601 acaacccagt tctcttttcg caaccaaatg ccttttgtca tcttcacaag gtgcatcatt
      661 taattaccaa ttgatttctt tatatatgac aacatgtcag atagcaaaat acagtgtatc
      721 tcccttaggg ggagaagtct gttaactatc agcgtgccag attactgaac ttagctggaa
      781 gacagctatt ccctccactg cgcctttatt ttaactcgct ttccagtttt c
//
LOCUS       KCPA01003295             491 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 362985tic ultra-conserved element locus
            uce-4294, sequence.
ACCESSION   KCPA01003295
VERSION     KCPA01003295.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 491)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 491)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="362985tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>491
                     /note="ultra-conserved element locus uce-4294"
BASE COUNT          153 a           99 c           82 g          157 t
ORIGIN      
        1 taaattctcg aaaagcctta aatctgatct ttaagtttga cagatatgct atatttgtgt
       61 ggtggttttt acctactgta gctctgtgtc ctctgagtac agctaagaaa aacctgtgag
      121 attgttaaat gggagcttca cctgccagtc tgtactgcaa gatctctata gcaaccaaac
      181 ataaatcaag aaaatggccc cttttgtaag ttggttaata ggcacaacat gcttctttag
      241 aaaatccaac tattctttca atagactttg attgaaagtc agccttttct acagacacat
      301 tcacattcac atctagtagc agcttgtatg gctgtccaag gcctaattta ttacccttta
      361 aagattgggc aaagaaaaaa tggttctcgg aacaatgttt acattcagag gcataagcac
      421 agtgccacaa aagagcatcc ttttgttctg aacccagaat attaatcttt aacctacttc
      481 ttatttcaac t
//
LOCUS       KCPA01003296             709 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 363086tic ultra-conserved element locus
            uce-1306, sequence.
ACCESSION   KCPA01003296
VERSION     KCPA01003296.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 709)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 709)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="363086tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>709
                     /note="ultra-conserved element locus uce-1306"
BASE COUNT          193 a          134 c          154 g          228 t
ORIGIN      
        1 cacatgaaaa caaatgcgag ccatcatatt tcattagctg gctgcccccc gttcaagtgc
       61 ccttttttga tgtcagagcg catcctgaca gaaatcagga agatacgtgt gattaaggcc
      121 agcaataata gttagtgcat tgtattgtaa attacctttc tgggccctgc tactttatca
      181 gccccactgg ccttggcttg ggtacatttt tgactactct gtatatacag tgtattagcg
      241 caatggagat cattatgtgg cctgtatttg agtcattttt atttaagatg ccaaacaata
      301 agctgttgat tgggggaaca agaggcgaac aataatgttc tgtgtcacat aatacaccac
      361 cattttccag ctttgcttta gaagggccct ctttattgtt tttgtataaa aatggttctt
      421 aggaggagga atattttgct gaggtatgtc attattttgc aaatttctat tatctcatca
      481 tgttgtcttc attgtaaatt gcagctaatt aggaacctag ttagagcccc agctttgagg
      541 ctggcttttt tgtgaaaaga gcccaccgat taccgcacta caagagagga agggagagaa
      601 aaaggagatt aatctggtta cctaggcgac actcgcttcc atctgcgagg aacaatacat
      661 ttttgtttcc ttggctcagt tcagatctgt tttgtttagg gggaaaaaa
//
LOCUS       KCPA01003297             491 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 363196tic ultra-conserved element locus
            uce-380, sequence.
ACCESSION   KCPA01003297
VERSION     KCPA01003297.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 491)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 491)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="363196tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>491
                     /note="ultra-conserved element locus uce-380"
BASE COUNT          155 a           96 c           97 g          143 t
ORIGIN      
        1 ggggatattt acagcaccta aatcaatgct gaggacatgc agaatattga gggatcaact
       61 ctacttattt caaatgcact ttaatatttt aactgcccga gcgaaatcac tgcgctggaa
      121 tgataatgag gagttttttt atgatggttg gagagaactt tatggaagtt gataaatctc
      181 atcttgtagg tttcaatttc tcattgagat gggcagaata cattgatact gcatttcaaa
      241 ttggccagat caggaggaac agcagctaaa atccattaca acccaattac atccatcagc
      301 tgaagctgtg tgcattcact cgtgaacatc agcatttaat ccataaagag gaactaatga
      361 gaaatttgaa aatggaatcc atgcatcagt ggcttttttt gccgggatta atgaactgcc
      421 agaacgttgt caacacactg caaacccatt ctctccaggt ttgtttactg aaagattgca
      481 cccatccctc a
//
LOCUS       KCPA01003298             574 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 363301tic ultra-conserved element locus
            uce-6161, sequence.
ACCESSION   KCPA01003298
VERSION     KCPA01003298.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 574)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 574)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..574
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="363301tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>574
                     /note="ultra-conserved element locus uce-6161"
BASE COUNT          174 a           98 c          128 g          174 t
ORIGIN      
        1 tgataattaa ggagttattt tttaaagctg tcagccaact tcattggatc acaggctatt
       61 ttttactgca aaatttattt tgctgttctt taaattaatt cacgtgtatc agtgatgatc
      121 tttgctgtgg gactgctgac tttgtatttc agcgtagtca ggtgctgagt gtaaatttca
      181 ctgactgact gaaagtgcag gggaaatgag tgggtaatga gagcagagca gccagttctt
      241 taattgaatt aaaagccggg tgacaccaat gcagacacct gtccaattac agacaggcca
      301 aggtgtttac cattgctgta caagcgattt gaagatgaca gaaatctttc cgcccacaga
      361 ttaacataat gaaggagaac agattacagt ggatgctggc caaacagata ggatggcagc
      421 tgagaaaaaa gtagtttgct gaagtatgta aataaaatct gtgcactttc tattgcctac
      481 ctatgcacat ctgtttcttt gttcagtgca agaatacatg tgaacattaa ttaggaagtt
      541 gctgcctttg ctgaatgaac ctcctgtagc aaaa
//
LOCUS       KCPA01003299             540 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 363410tic ultra-conserved element locus
            uce-3281, sequence.
ACCESSION   KCPA01003299
VERSION     KCPA01003299.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 540)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 540)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="363410tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>540
                     /note="ultra-conserved element locus uce-3281"
BASE COUNT          141 a          119 c          102 g          178 t
ORIGIN      
        1 tggattaatg gctgccttca gtaccggttg ctagaaaaaa gttattttag agatgtggca
       61 ttctaccttg tttgtagaca aagtagcagt ctttgaatga agggatgtct aggtgatctg
      121 aaattgcaat tggcaacagc atccaatatt cagtgcacat gtcttagcac caactttctg
      181 ccatttcaag cacctctctt gctctgctcc ctaccctggc tccccaagcg catttttatg
      241 gctttaattt aaacgagtgc ttcttgatat cttgtttaca aagctgccag agtgaaaaat
      301 acctgtatta tatgaggctt gcagttccag agttatctct gcactacaac acaacatcat
      361 tatccagtct gccccttatc actcagctgg taatacagac tactgagaga cttgtgccac
      421 ttttgttaca gctttatatg ctcaggctta ttggtggtat cttcctctcc aactttgtaa
      481 agatcttcaa actggtacaa gcctgagact gttcttgaaa gattagattc ttcttagtga
//
LOCUS       KCPA01003300             794 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 363522tic ultra-conserved element locus
            uce-2952, sequence.
ACCESSION   KCPA01003300
VERSION     KCPA01003300.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 794)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 794)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..794
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="363522tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>794
                     /note="ultra-conserved element locus uce-2952"
BASE COUNT          275 a          139 c          150 g          230 t
ORIGIN      
        1 agatatttta tgcaagtcat aaaatttcag tggtatatgg aaggggtctt agcgaaatac
       61 acatatgact ataaacaagc catcattctg gtaagaggaa atacaaacaa ccagaataaa
      121 aatagttgat gcacaaaagc cataatgagg gggttgctca aaaaataact tctactttga
      181 atggtttgga tgaaatacaa attatccaca gaaaagtgtg gactggcata aatgtttgta
      241 caaaattata agtatatttc tagaagtatg caagagacaa ccgcctgcat gctgcacaag
      301 gtcccaacaa cgttctgcgt aagtgccagt gcacagagtc caaaccactg cattttaatt
      361 actatgcagc ctcagatata ttgcctttga tatggaaatg ttcttgttct ctcatcttca
      421 catacggtct catgcacaga aatctttatc tgattcataa aaaataaact agaatccaat
      481 ctcaacacct gacctcagtg cttagaagtt ttttactaag cgtggtgtca ctataaaaag
      541 aatgggtaat attggtgtaa agttagatat ttggagcaat gatatgaagg atttgcagtt
      601 aggaatcaaa tcaatactgc acctctaagg ttttagagtt tcctgttgtc ttatgtcagt
      661 ctaccagtga ctggagacac aattgactac acctttctgt ctagctcaag aagaaagaaa
      721 aagtatttaa atgacatcct atcttgccac agatggaaga gatgcacttg ctgtatggaa
      781 tagttctgaa atcc
//
LOCUS       KCPA01003301             790 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 363739tic ultra-conserved element locus
            uce-3477, sequence.
ACCESSION   KCPA01003301
VERSION     KCPA01003301.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 790)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 790)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..790
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="363739tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>790
                     /note="ultra-conserved element locus uce-3477"
BASE COUNT          222 a          147 c          164 g          257 t
ORIGIN      
        1 atttattatt aatactgcaa tcccactaaa ttcttagaga caatggaccg ttaaggagta
       61 tgaggctgac tgaagtgcct ccaccattta ggggttagca actaaacggc attatataat
      121 ttgagtcaat ttctgcccga gattccaggg agtgaactca tcaggattac tcattgttaa
      181 aggagtgcct cagggtttag tactttgact ttattatttt ttccttcagc tattcaaaac
      241 cttggttggt ttgtaggaaa tgttaattat cctttctgtg ctgatgtccc actgctgttt
      301 tataggcaga gctttacttg tacaacttca aaagaaatct tcaaactcaa tattaccaag
      361 tttgaatatt atctaattaa cctcccagtc tgtcatgcct tgttggttat catgaaataa
      421 tcacagcccc tcaggtgttg aagctctaga tgcagctaag tgcctctaat tccctaaggg
      481 ggtgattagc tcatgataac aatgctccct tgagttgttt tattgctttt ataaaaagac
      541 tttattgtgg gggaaatgtt tatttttatg caggaggaag atggagctga cagttgaggc
      601 tggtgagtga ctgcagctgt tactcctgag ccgtggtgca aaccttgata tatttgctca
      661 tttctgatac tccttggaca atcacaatat gctggctggt aattaagctc ctgctgaact
      721 cacagtgtga agacagaaaa taaatacttc tggttctgcc agaggtgagc agttacaaga
      781 caaagcaaaa
//
LOCUS       KCPA01003302             447 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 363843tic ultra-conserved element locus
            uce-7265, sequence.
ACCESSION   KCPA01003302
VERSION     KCPA01003302.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 447)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 447)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="363843tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>447
                     /note="ultra-conserved element locus uce-7265"
BASE COUNT          149 a           81 c           79 g          138 t
ORIGIN      
        1 aaaaagaaac agaagagaag tctcttggca gaaaaatgtg tcttagggac tcttccaagg
       61 cttagatgta atggagcaaa gcatacagga aatacttcag tgctttgaga ggcatttcct
      121 tccctccccc ccttagaaag acgcagtaat taaaacctaa ttattatctt cattttaaac
      181 aaaacctaaa gtgaatacca attaataaca acatactaat gagcatctgc tgtgatgaaa
      241 ttgaatatga atgtgctgca aatttcgggt aatttatttt ttcggggaag tgccactggt
      301 ctcaatctac tgctggaaga ttgtatagac agtacccatc ttccatcatg tcttgtgcag
      361 caatttttaa ttttaaggac atacttcaac tttgtggatg tttatatatc tgaatctatc
      421 catgctacaa tgatttcaag gcaataa
//
LOCUS       KCPA01003303             333 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 364051tic ultra-conserved element locus
            uce-5495, sequence.
ACCESSION   KCPA01003303
VERSION     KCPA01003303.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 333)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 333)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="364051tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>333
                     /note="ultra-conserved element locus uce-5495"
BASE COUNT          121 a           46 c           53 g          113 t
ORIGIN      
        1 tgcccagcgt gaactataaa tacaaagata attttaatta atttatttat ttctttacac
       61 ataactgaaa gtgatgttac agtacataag ttatttacaa ctgtgcagta atgtgttgca
      121 aaataaatta tctagaaggc agcaaaagta cattgttaat gtatataaaa actgtacagc
      181 atttatggga tacaattttt ctttatatga gtattggctc tgtagtgttt tcaagttatg
      241 ttctcagaaa gagaaacgaa atgcccaaga ttaaaggtat ataaaccacg tggattttac
      301 tccattaaaa acacagttgg caaagtcctt tct
//
LOCUS       KCPA01003304             494 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 364157tic ultra-conserved element locus
            uce-7162, sequence.
ACCESSION   KCPA01003304
VERSION     KCPA01003304.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 494)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 494)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..494
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="364157tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>494
                     /note="ultra-conserved element locus uce-7162"
BASE COUNT          156 a           59 c          109 g          170 t
ORIGIN      
        1 tttagcttgc ctgtgtgcgg cttgaatatg aaattttaat tattcctctt aattatggtg
       61 cattcaccaa aaagagggaa atcattggtc aggtacaaaa agaagctgct tagtatttga
      121 aggaatttga taattttgtt gtagttcgta gcttggcagg tggtaataat gctatgccag
      181 cactgtcaaa atatgaaaat taaagtgacg atggttttta atgaaatcca tttgacaaat
      241 ataattaagg tgttttaata tgaagccctg taataaagac taccggtgga ctccctgagg
      301 tcctgactaa ttgtgtagat tgcttttaag ctttgaatag ttttattgga taatgaactg
      361 ttaagaagtg ttagatcttt cttaagcaga atttggtttg aaaaagaaga ggagagacag
      421 gcctgaggtg tggcatttta aacataatta gaagagagat ttaagttaac atctttgatc
      481 ttgctgtcag tttt
//
LOCUS       KCPA01003305             427 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 364265tic ultra-conserved element locus
            uce-1168, sequence.
ACCESSION   KCPA01003305
VERSION     KCPA01003305.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 427)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 427)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..427
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="364265tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>427
                     /note="ultra-conserved element locus uce-1168"
BASE COUNT          126 a           67 c           63 g          171 t
ORIGIN      
        1 aggcagggaa atgtgtaaat tctcctcccc aacccctatg tatttcatta tacattttga
       61 actgttttat aaattcagtt accagtcact acttagtaat tgacaatttc tgaaaattcc
      121 tgtttcagca gaattttaaa tgaaggcgaa agcaagccct acatgctttc tacttatttg
      181 aatgtttctc aagtatttta tattaaaaaa cagtgcctct gtttttagaa ctactgctca
      241 gtaaagttgt ttaaaccatt tctggtagct aatgacaatt ttatattaaa ttgtatatta
      301 actttagtga gactgatttt tttagttgtt tacagtacaa atacttgtat ttgtttttta
      361 attgcagtat ttccattgtc gcagtaattt agtaaaactc tgtggctgcc ttgatttttg
      421 acagatt
//
LOCUS       KCPA01003306             443 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 364376tic ultra-conserved element locus
            uce-3830, sequence.
ACCESSION   KCPA01003306
VERSION     KCPA01003306.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 443)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 443)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="364376tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>443
                     /note="ultra-conserved element locus uce-3830"
BASE COUNT          111 a           98 c           85 g          149 t
ORIGIN      
        1 tttaaagctg caaacatgga gaacttgtgt ttccttcatg actgaaacct ttttatgacc
       61 attcttaaaa ctatttttgc acgtttagca ggaatcagtt tgcgttgcat gtctccttcc
      121 aaatctcatc ttcctcagga tgagtttgct cccaaatgaa gtagaggcgt tttccttcag
      181 gctgcatgtt atcctcttat ccctactgtt ttggaataga gcgtaaccag ctggagaact
      241 gtaagaagcc tgataatgca gctattttct gctgtcccgt cttaatcttg ttacacaaat
      301 ggttgtgaag agattcatga attttaattt tgccctctgc attagtgcct catgtcactc
      361 atacacagct gccttctatg gggagttgtt cacccctcct cctacaacag gggaaaaaat
      421 tagttacaat cttggcagta gtg
//
LOCUS       KCPA01003307             674 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 364483tic ultra-conserved element locus
            uce-5943, sequence.
ACCESSION   KCPA01003307
VERSION     KCPA01003307.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 674)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 674)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="364483tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>674
                     /note="ultra-conserved element locus uce-5943"
BASE COUNT          159 a          177 c          157 g          181 t
ORIGIN      
        1 gacagctctg ctctcgtccg tccactgccc atcacacaat tatggctgcg acttactgta
       61 atcaacgcta tctgtgccgg ggcttcgtgc cgggaaaggc gtttggcctt attttggagg
      121 gcgggcgggc gcgtgtgcgc gggcggggag gagtacagtt tgaaggagtt gttagaaaga
      181 acagaagtgt gcctagcctg aggcaattca ctgctcagcc tattagctgt ggtgaccttg
      241 cctattcctt tgtctttgta ttttcctcct gctgctttcc ttctcaagca ttcccttttg
      301 ttgtcttaga gaatgagaaa aatgccatat ctccctccag ccccctgtag tttgaactcc
      361 tgagatctgg tgacacaccc agcctgtagc cacctttagc cctgcgtgaa cttggcagga
      421 ggagagtcaa ccattaaata ctgagcagag actcaaacag atagaaatgc ttgcccacac
      481 tcctacccca ggctgccttt ttattgcctg tccttcatac agagggaaag agccttgtag
      541 ccaagttttg acactgccac atatggcctc ctccatcaat ctgactaatc aagcatcaag
      601 gagaagcaaa gccaacttaa ttgccagcca gatatctctg gtctcacttg acgcaacttg
      661 aaattgatat aagt
//
LOCUS       KCPA01003308             622 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 364589tic ultra-conserved element locus
            uce-7171, sequence.
ACCESSION   KCPA01003308
VERSION     KCPA01003308.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 622)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 622)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="364589tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>622
                     /note="ultra-conserved element locus uce-7171"
BASE COUNT          202 a          124 c          107 g          189 t
ORIGIN      
        1 aaagcttgca ggcctggcag ttattttgac agctgtcaat caaaatgtct cacagctacc
       61 ctaccgtgtc agccatcagc taacccacac tttcccaggg acgtcttagc atggcatctt
      121 tgttctgttt tcagataaac agatccaatt tctcaacaaa cagactgcta cagtcctttt
      181 gataacaatg taataattca aaacaaatga ttctaggctt tgatgatagc acttttatgg
      241 gtcatgaaga aatcctccca ccaacatctg tttgatttta tctacttgaa ctttatcctc
      301 cagttgaaga tttataagct gaaatcatcc cagcctatta aagtcaggct aatgttaaag
      361 cactaacaca gagaatgaaa gtttttgcag tcatccacat tttgaaatcc ttccgtgagg
      421 aaaagatatc aaaagtttga gagatatatg tttaaatatg ctagaagtct gcattatgca
      481 cagagccctg gatgactgag agattaagga atctaactgt tgccctactg tgggcgcaaa
      541 ttatttacag aactattatt tagacagaca acatgaaaaa tacagatgtt gtttacattg
      601 aatgactgtt ttcttagcaa aa
//
LOCUS       KCPA01003309             585 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 364700tic ultra-conserved element locus
            uce-4234, sequence.
ACCESSION   KCPA01003309
VERSION     KCPA01003309.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 585)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 585)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="364700tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>585
                     /note="ultra-conserved element locus uce-4234"
BASE COUNT          209 a           90 c          103 g          183 t
ORIGIN      
        1 tttgttacag ttttattgta gtgaaatatg ttaattttag cagtggaaaa ctgccctaaa
       61 tagacagcat aagagccata agatgtcaca ttgcagagca caatttaaaa atgatgtgct
      121 ctagaagtaa ggcttttaga cattttggtt tatgtattaa aacttccaac aaatttgatt
      181 gagaatgagc ctttgatgga tattttctgc agttatgctg cattagactc gatttatcca
      241 ccacctctca ttgttgctat tgattgattt ttaaattaga tgaaggcaat cagtaaatac
      301 cacccaatca agtcctaaaa acatacagga gattagacaa tttagggtaa tcaatgaaaa
      361 tattctgtga tttgctacca ctcaattttg accataaatt acgaccataa cttgcaagtt
      421 agtaagccat aaaacaagtg gatgtgacaa gaaaaactac aagaaatgaa ttaaggagat
      481 gaagaggaac cactagtgtt atcatttaat gagacaaaat tactctttat acatatctgg
      541 catttctagt tgagtcttgc taacagtatt ggagtacaag agcac
//
LOCUS       KCPA01003310             431 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 364810tic ultra-conserved element locus
            uce-3141, sequence.
ACCESSION   KCPA01003310
VERSION     KCPA01003310.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 431)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 431)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="364810tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>431
                     /note="ultra-conserved element locus uce-3141"
BASE COUNT          123 a           83 c           74 g          151 t
ORIGIN      
        1 tttttgctaa atgttgactc cagtgaacag ctctctaaga tctggcatat tgatttcttg
       61 ttgtgaagtg agctgttcaa gctccattta agattttcat cttgcatgta gccctgagca
      121 catcatagca ccataaatta gttaaattgc acatttatca caaatgttat tttaagatac
      181 tgcgtaaatg tgatggctgg aagatataca gtatgctgca acaagccact acttgggtgg
      241 ggttagacca gggtcacctt tatacacctg tgatttaaag ctcttctcac ccaatttcat
      301 tttaacctct ttcttgaggc attttgcttt ctcttgcact tgatctgcat atttctaaat
      361 aaaatatcaa atgcaaagca aaagtcggaa gtcagatgct tattttaaaa tcctgcattt
      421 atacctgtat g
//
LOCUS       KCPA01003311             489 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 364918tic ultra-conserved element locus
            uce-4983, sequence.
ACCESSION   KCPA01003311
VERSION     KCPA01003311.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 489)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 489)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="364918tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>489
                     /note="ultra-conserved element locus uce-4983"
BASE COUNT          154 a           77 c           92 g          166 t
ORIGIN      
        1 aactatctaa ggtgagattc tttctggact attaactttt tttagtattt agatcacaac
       61 tactaaagac ttagctatat tttgacaggt actgacaaag agtgccatgg aattgtgact
      121 caattgtcac cttcgtcgtt ttcaagctga aaaactcagg atgagtgcta ggtactaatt
      181 agaactgtta tattaggaaa gcaaatacaa tggtgtctaa cattaaacaa agcacagttc
      241 tcatcacaaa tggtttcttt tgtgtgcggg ttagtctaaa aacccatttt gcatgctaat
      301 gagacacaaa caataattgc caaagtaact agtttcatgc aattacaaag accacataaa
      361 aagctctatt gtttgttgtc ttatgatttc ttaatgctaa ttttccactt gataatttgg
      421 ggatttcatt tgtaccacaa tgagcaattt ggggtttgtg tgtttgaagg tgaggacttc
      481 taatgggga
//
LOCUS       KCPA01003312             746 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 365026tic ultra-conserved element locus
            uce-3406, sequence.
ACCESSION   KCPA01003312
VERSION     KCPA01003312.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 746)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 746)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..746
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="365026tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>746
                     /note="ultra-conserved element locus uce-3406"
BASE COUNT          225 a          140 c          132 g          249 t
ORIGIN      
        1 taaccagctt acagcaggcg ggattgaaat ctgtcctttg gatccaggag ttcagaaggt
       61 ttcttgtgtc actggcaata aataatgtgc aatgaacaaa gacatcaaca tacatgcaca
      121 tgggcgtgtg tgcgtgtgta tatgctagtg tatatataaa gaagtgaaca tttttaaaag
      181 ctatatatgt atatgtgtag catcttatac atataaatat atggtccatc attctaattc
      241 catgcacaac tgcactataa ccattgtggt ttataagatc acacttcata tatgcatgac
      301 tcactggctt cattcatgtt tccatatgta tgtagaaaca tagcaaagca gacattccta
      361 gagacattgc aggacaacct cattgagatg gacattctca cctcctcccg acatgacggt
      421 gcttacaatg atgggtatgt gacacttacg tggtcttctg tttactgtac agtcattatg
      481 atccttgcat gaaagcattt ggtcgtatca gtgatgttta agggcaacac tattgctgac
      541 ctcttccaat atggcttttg gagcattgtg tcctgtacat attaatggca aactcattaa
      601 tatgctagtg agccactgca tgccatttgt ttttatcccc ttattgtttt gaaagtaatt
      661 tcatttgtaa gaagtaccta cagcaatttc aactcccata ttaactaaaa ttaatttaat
      721 tttcataaaa atctgaaact tttatt
//
LOCUS       KCPA01003313             749 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 365244tic ultra-conserved element locus
            uce-5620, sequence.
ACCESSION   KCPA01003313
VERSION     KCPA01003313.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 749)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 749)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..749
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="365244tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>749
                     /note="ultra-conserved element locus uce-5620"
BASE COUNT          194 a          185 c          217 g          153 t
ORIGIN      
        1 gtgtcccctc tggctgctgg atgactgctc aggaaactgc cataatttta ctcctctaaa
       61 tacagaaatc gccacttctg ggttcagatt tattagactt tcatacaggg ccaagcaccg
      121 ctaaaccgat tcctgtccac ccaacccagc cacccccaca gatactccaa gcccctcagt
      181 cttacttgaa agggaaaaag aaagggccag tgagatgatc agggtggagg gggggtggta
      241 agatttacaa gtgaatggag gtaagaatgg agcagtttgt gggataaagg ggctgcggag
      301 ggagctttac agatgtgcag agggacggcg gctcattgtt taattaagca gaaagtggct
      361 cttttgaaaa gcaattttgc acaggagctc tgagctcagc aaacaactcc tgcgagtgag
      421 ggcaggagga gaaaggaaca gctggcccgg agccgtgtga accgcatgct aagcggttta
      481 aagggcccgg atcctcctcc ccagccctgc tccgctgcca ccctctgaac agcgctgtca
      541 gcacagcaaa tcccaccaag agaaaagagg gagaggaggg ggttatcctg ctaggtgtcc
      601 gcactgcaat acagcggctg ggaaggacca ggctttgtta tcccagggat ttggtcacac
      661 acaagagctg gtttcccagt gcctgggttc cacaatgagt tgggatgagc tgatccggta
      721 aagcggctcc acggcctccc aggatggtg
//
LOCUS       KCPA01003314             645 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 365354tic ultra-conserved element locus
            uce-2156, sequence.
ACCESSION   KCPA01003314
VERSION     KCPA01003314.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 645)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 645)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..645
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="365354tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>645
                     /note="ultra-conserved element locus uce-2156"
BASE COUNT          215 a          127 c          112 g          191 t
ORIGIN      
        1 aagtaagaat ttctagcctt atattttcaa aaacacatca acttgtcctt accccagaac
       61 ggcaaccatg atttcatttt tgaaaaacag gcctcatcct actgaatgct accaaacatg
      121 taccttatcc tttagctcaa atacattttg catgacctta catgaattgc ttagataaaa
      181 gcccttctac ttttgttatt ttaaagtgca gatgcatttg agtcattttc cccttttgtt
      241 tcatatcctt aagatccaca gcttcaaaga caaaatgtca gcatgcagtc gatttatgac
      301 tgaattcttg aagagacact gaagaattac cttgtcaatc accccaagga ctctgaaggt
      361 cttcagttcc tcggcagggc tccttaggtt ccaagagggc cttgaactta gtgatcctgg
      421 aggctaatgg aagatatcaa agattataca tcaatcaggg tggtacttga aggaagactg
      481 cctgctgaag caaatgccag gccgaaggaa actaaattta tcataaatca gagagactga
      541 agatgaaagg agaagttttc tgtttgtcct tcaacttgca agtaaataaa agtcaagata
      601 acactgaaaa caaaaattta aaaaagcaat ggatttttat atttt
//
LOCUS       KCPA01003315             712 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 365466tic ultra-conserved element locus
            uce-1252, sequence.
ACCESSION   KCPA01003315
VERSION     KCPA01003315.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 712)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 712)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..712
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="365466tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>712
                     /note="ultra-conserved element locus uce-1252"
BASE COUNT          214 a          120 c          151 g          227 t
ORIGIN      
        1 ttttaattac cagtgaatac atgaactcct ttgccacagg cttaatgccc cttttcactc
       61 catcagccaa tgtctaaaaa cgattttgca tgcaacgctg gggaggtgaa gtggtgaagt
      121 tacttgtgta ctttgccact gtcttgtgag ttttgtctgt gaaagtttaa tgtagagggg
      181 ctctgaatga ttcagtaaac ttcttggcaa gttagtatga tttgtatgtg aattttccaa
      241 ttgtatttca gaccttaaga aagaaaggcc ttaatggttg tgagagccct gatgctgacg
      301 attactttga gcacagtcca ctatcggagg acagattcag caaactaaat gaagatagtg
      361 attttatttt caagcgaggc cctgtaagta cttttatttt atctctactt tttatttgtt
      421 gatccttttt attaacttca ttatttaggc tctgaacaag aaggaacaca gagggtgcga
      481 cagcccggac cctgacactt catatgtgct cacgccacat acagaagaaa aatataaaaa
      541 aattaatgaa gagtttgata atatgatgcg gaatcataaa atcgcagtga gtactaaagt
      601 atggtttgtg cttctcttac atgcatgaga attttcatgg tgtttgctta ccactgaaaa
      661 ccacttcaaa gagatgtaat ggcttgagaa gggagaaaaa aatgagcttg tg
//
LOCUS       KCPA01003316             649 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 365578tic ultra-conserved element locus
            uce-7791, sequence.
ACCESSION   KCPA01003316
VERSION     KCPA01003316.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 649)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 649)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..649
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="365578tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>649
                     /note="ultra-conserved element locus uce-7791"
BASE COUNT          183 a          151 c          126 g          189 t
ORIGIN      
        1 ctatcccagt ctcaaaagac tttcttacta gatcatttcc tggaaagcat gtccagcaga
       61 gtgtcacaac cgtctagcca gcactaactt ggctttctat aggtattgtt ttatgtgact
      121 atgacgtcct cctgcgacac aaaaagtgca gatgtaataa tatacatagc aatatatttt
      181 caaaccacca gagccatttc ctcctctttt gttccctttt atgaccctga tgtcatttgg
      241 aataaactgt aattgggtca ttttgtcatc ctctgagcag cctccattaa caaaccttta
      301 cagcagtaag tgctggtagc aggatctctg tcacaggcag ttgccactta gtgaagtttc
      361 acaaacatat cttcattatt tatgcatgct gtgctttatt accgtcgcca ggtgtgagcc
      421 aagaacactt cagtacacac aggcagctaa agaggtcaga tgtcagcgct gaagtaataa
      481 cgatactgaa caagagaggt gtgttttcac gtcagcagcc ctgtgccttg caaggcgctg
      541 cacctgcttt acagcagtgt tttaagccat catggcatta ctgggagatg acaaacatcc
      601 ctaacacctg tgcatatgct tatcataaag aaaattctaa gctgtagga
//
LOCUS       KCPA01003317             541 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 365678tic ultra-conserved element locus
            uce-2648, sequence.
ACCESSION   KCPA01003317
VERSION     KCPA01003317.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 541)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 541)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..541
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="365678tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>541
                     /note="ultra-conserved element locus uce-2648"
BASE COUNT          179 a          104 c          145 g          113 t
ORIGIN      
        1 aaggtactgt ttagaacacc ttattagcac caactgaggg gccaattttg gctggagtag
       61 agtggtacaa ggttcctaat atccttcaag acatccatta ttttaccaca gagacacaag
      121 gccaagcttt ttgtgcattt ttatgaggga gaggtgtgga cgtccaatca gacagaaagg
      181 cgcacgtgct cgtgaaatga attacgccga cgtctgttat aaatctttaa catagctcag
      241 gagatcaatt aagatgttca agcagctaca aaaaggatga ttgaggcaaa tggtaacatc
      301 aggatgacca tatggtaagg gaacgccaga actgcgtgga cataaaacgg gagccatcgg
      361 agtgccaccg ctaacgaagc agcgagcagg aaacgagaaa agatagagga ggagggaaga
      421 acagcgtggg atgcacacac agatatcaga gaaaagtgcc ttcctacaaa ccactggttc
      481 aaggtgttgg cgcgatgcag agttgacgat cccaaaaggc gtggctgaat gtctgaaata
      541 a
//
LOCUS       KCPA01003318             864 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 365787tic ultra-conserved element locus
            uce-7688, sequence.
ACCESSION   KCPA01003318
VERSION     KCPA01003318.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 864)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 864)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..864
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="365787tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>864
                     /note="ultra-conserved element locus uce-7688"
BASE COUNT          275 a          153 c          160 g          276 t
ORIGIN      
        1 cccattcctt cttgcaacag tgagcaacag tgtactttcc agcaaccgcc aaacactatg
       61 aaaatggttt catttacttc cagaatttgc caaaaacaga tgatgactga aactggtaat
      121 gactattttc tattctctat ccctaagtaa ttgaccatta attataatat caataggctg
      181 tggataagta aagcagacac atgttagggc tacatttcat ttgtaactgt tttgtatata
      241 tcataaatct ctaatattgg gctattgtca cacatgatga attattgtaa gcatgtcagc
      301 acatagtgga agtcaagtac attcaaatac tactcagtca gaattgaatt tggcatgata
      361 gtctcataaa aggggactca attgagagtt tccacttgcc tgctctaaac ttgtcacttg
      421 taggtgctaa agagcttgtt gtgttggttt aattagtcaa caaatcggtc cttacttgat
      481 tgcgtggtcg tatcacatat gttaacactt cactgtttga tggagatatt aacaagtgac
      541 aagagtctct tggtctatgg actttaaaga agagaagctc ttctatatta tttcatttgg
      601 tcctgccaat atttattaga tcatgcaggc tgcaggctgc caacaagaga aagacaacac
      661 aaacattttt cagggttatg ctcatctgta tcccaaagaa gggtcactaa acaatcgatg
      721 gtagaagaat ataagtaaga tgagtgtttt ctaccaaagc ttagaaatcc attatatgat
      781 acagtttgct gcggacctcc ttggagcttt tttcacttaa agataattta tgacaagaac
      841 agagaggttc ttgaaaatgc tata
//
LOCUS       KCPA01003319             616 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 365897tic ultra-conserved element locus
            uce-2206, sequence.
ACCESSION   KCPA01003319
VERSION     KCPA01003319.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 616)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 616)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="365897tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>616
                     /note="ultra-conserved element locus uce-2206"
BASE COUNT          205 a          128 c          100 g          183 t
ORIGIN      
        1 attcgagttg gaaacacaaa acaggttccc ataattagat ccacttacta taaatgaaat
       61 tacaccctgc ttaaaaaaaa gttggtcagt ttccatttat gcttttaccc atttccctag
      121 tatggatgtt tcattgatgg ctgagggtaa cacttcaaaa atgaactagc taaacaaact
      181 tcccagcagc acttgacaga gctacaccta ttcttcccca tttccaaagc agtacagaat
      241 taattaccag ttctatggat ctattgtaag tataatagac taaagagcta tcacagacac
      301 atttattgta aaagcacaat cccaagagtg tctagtagag ggccaaaacg attaacacaa
      361 atgctttgtc agatcaaaga taaaacctgc accgcccaat tgaggaatga attagaacag
      421 tgggttatct ttcaaattaa ccagggcagt tagtgaggaa aatttcatga aagtgtaatt
      481 cttagccttt gtgaatccac acagcaggca ttctgccagc tgacaagatg atgaaatttt
      541 catgcttaaa aaagccctct tcatttccca atttagatta gctagcgttt ctctcttttc
      601 atctatttgc tcttct
//
LOCUS       KCPA01003320             708 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 366005tic ultra-conserved element locus
            uce-5966, sequence.
ACCESSION   KCPA01003320
VERSION     KCPA01003320.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 708)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 708)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..708
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="366005tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>708
                     /note="ultra-conserved element locus uce-5966"
BASE COUNT          192 a          138 c          175 g          203 t
ORIGIN      
        1 ctctgaactt ttggggtttt aaaggttatt cccgtcactg gcggtacaga gcgctcacta
       61 tgactggcaa ctttagggag catgcagttt ttactctgtt gactcttggc taccgttttg
      121 ttcattctat attcttgaca gcaaattgat ttaacttgca gcaggagtgt gtgagtgagc
      181 ccacaggaga agatgtgtga atatgaaatg tagcagggag caaggcgagg atactgaatg
      241 gcaacatgta ggcattgact gtgacattgt attaaccttt ttaatggatg tatgtaataa
      301 agtgacatgt aaatggagca caaggggaga tatgacacta tatctggata aggataaaac
      361 agtcagtgaa tactgggcta ttatagcagt ttgcaaacct tggataaact cagtcagcgg
      421 ttgtataatt ggttattcaa tcccaaccct tgttcacagc tcaaagccag gaacactgag
      481 acctgttgcc aatttgagtg aatgcagtga ctgtactcgg ccggagccta acactggagc
      541 caggcctttt cctgtgggct ggtttccacc atgtctggga ctggcgcagt gacagtagcc
      601 cttttgttgt gagaggctgg ctggtactcc cctcctttgc aaaatgtcta acagctacac
      661 aaatataaga aaataggaaa agggacttac tgtagctttt ctcttccc
//
LOCUS       KCPA01003321             573 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 366111tic ultra-conserved element locus
            uce-4024, sequence.
ACCESSION   KCPA01003321
VERSION     KCPA01003321.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 573)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 573)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="366111tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>573
                     /note="ultra-conserved element locus uce-4024"
BASE COUNT          130 a          135 c          116 g          192 t
ORIGIN      
        1 gacaaagcaa gatccttcac acgtgtgagc ttccagacac gcagcctgcg ccctccattg
       61 gctaaccacg aattcagcct tgttggaaac acaagcttga agaaggttct tcttgttgtt
      121 ctttacatac tttgttttgt ggtcctcgtt actgacggct gcttttgttt gttccctttt
      181 tcctttgtcc atttgacttt cccggtgtgt gtgttgctac cagtttctat tgctccaccc
      241 cctcccccta tgcctcagtt gactccacag atacctctca caggcttcgt ggccagggtg
      301 caggaaaaca gtaagtttgg acaagctgag ctgttaaagg gtagagccta ctctcttcta
      361 gcgtgcatgg ctggcaagtc agactctttt gtttcctttt ccagaagcta ataccatctt
      421 gcattctagt gtcaatatgc tattggagct gaagggcaca ctcttcaata ttttataaca
      481 cgtgcatgat tattgctgac ccatttaagt tctctacaaa tttattacag aagtgtggca
      541 taagtttggt gtgaatataa aattgtattt taa
//
LOCUS       KCPA01003322             613 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 366216tic ultra-conserved element locus
            uce-2000, sequence.
ACCESSION   KCPA01003322
VERSION     KCPA01003322.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 613)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 613)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..613
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="366216tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>613
                     /note="ultra-conserved element locus uce-2000"
BASE COUNT          185 a          110 c          152 g          166 t
ORIGIN      
        1 agggcgatga gactaaataa cacagtgaag ttaagaagga gccaagggag gtggcggcga
       61 ggagaaactc tagaaaagca aaactggatt tcttctggaa agtgcagaat tctttagttc
      121 tttggttcca gagagagcgt gaagatgctt gtgccaggcg gcaccggagt ttgccaattg
      181 atccttctta ttctgtgtgt acatgcgaag tttggatcat gttacatgaa tagtgccagc
      241 tgggggttct ttgccagcac catgccaagt gaaataatat atttactctc tctatatttt
      301 acaccagtgt gtgcctgcag cagcctccac agccactata ggtttttttt gtttggggtg
      361 aggagcaggg ataaggagag caggtttcaa gttcctattt gcagaacagt ttgtttagct
      421 aggggaaaaa caagtccaaa gagcctatgg gcttttcctg tttctaaact ctcagtacta
      481 aaacagaaat ataaattatc aaatcccagt gcccagaagg gacaagtcta tcaaataagc
      541 agtatttact attgtttaga caggagatgt acaaaaggaa aggagatgga cttttcactg
      601 agtaaccagc aca
//
LOCUS       KCPA01003323             776 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 366328tic ultra-conserved element locus
            uce-16, sequence.
ACCESSION   KCPA01003323
VERSION     KCPA01003323.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 776)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 776)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..776
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="366328tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>776
                     /note="ultra-conserved element locus uce-16"
BASE COUNT          247 a          156 c          153 g          220 t
ORIGIN      
        1 tttagtcatg tccgcaattg attcagaaaa agacaatatt ttatccgtcc tctttggagt
       61 tcaagtatga atggtgaagc aaaagagagt gaaactgagg gaaacatgaa aagcttgatt
      121 tgttaggacc cctgctgtct gaaaagagat caaagctcag gaggaggctg taaaacagcc
      181 gaatgctctg cacagaaaca tggcctgtgg cagctgctct gggcacgctc tcacaacaca
      241 ggtgtacctc caagtctgct ctgccagctg aatcatggga ccaggctacc tcttctcctt
      301 cttcattatt tcaactgcag tcactgagga gatgtgagct ccatccatca caatgcacaa
      361 attcacagtg cgcagattca gcacaggcct aattaaagct tttcctttca tttgtggaga
      421 taattagact ttcatctcac caggaagctt cagaaagatc tatttctttc ttcaataaga
      481 gctacatcaa acaaaagcag attttaatcg ccttttcttt ggggcatgag tcaataatga
      541 aagatgtcat gggtaacaaa aattgtgtgc agagggaaaa aagaccaagc tatgttcttt
      601 aattaacacc atgtttgcaa acatcattaa tttgactcat taaaatgatt tttatctata
      661 actgattgtt gataaaacaa tcgatttgaa catctcatct gtttcatgcc atgcaggaac
      721 ccattgcaga ctgttaagca acatgtgaga acaataaaaa atgcatatgt gtgtgt
//
LOCUS       KCPA01003324             672 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 366440tic ultra-conserved element locus
            uce-556, sequence.
ACCESSION   KCPA01003324
VERSION     KCPA01003324.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 672)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 672)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="366440tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>672
                     /note="ultra-conserved element locus uce-556"
BASE COUNT          230 a          124 c          116 g          202 t
ORIGIN      
        1 gtagcaataa cgatgcggca gagccattaa catattggca gaccctagga tggattatcg
       61 acattgatta tttcatggac cactgatatc catttgttaa gagaagctcg aagatggcct
      121 ctctctgact gaaatctttt acgagcagac agcatttaag tattaggaac ctgggatttg
      181 ggcaacttct gccctagact ctaaccaaaa attaaagttc attcttcact atggtcttaa
      241 tttctcaact catcataacc atgtcttctt taaaaattaa tgattgccag catttagcca
      301 ccggttgttg ctatgaagat ctatgcaaaa agcaaggatc cctatagagt gcatgatata
      361 tggaattctc tttattacta caataaaact tactgacatt tcaatacttc tgcaaatagc
      421 attatagtat caatcttctg aattaggttg aaaattaagt tgtaaattaa aagaaagtgt
      481 actttggaat acaacatgat atgtcaccta gaaaaagacc tttgtgcata acagagctga
      541 gcagaaaaac tgaaagataa gcccaggtgc ctctaaagtg cctatttcat cataaaagat
      601 ctaggttata ttttacaaga agaatacagt ctgaaagccc ttatatttca cctcaggaga
      661 tcagattctg aa
//
LOCUS       KCPA01003325             572 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 366549tic ultra-conserved element locus
            uce-4840, sequence.
ACCESSION   KCPA01003325
VERSION     KCPA01003325.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 572)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 572)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..572
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="366549tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>572
                     /note="ultra-conserved element locus uce-4840"
BASE COUNT          148 a          156 c          135 g          133 t
ORIGIN      
        1 tcagaagttc ctgaaaccaa ggcagtgctg agggggcttt tcagtgcatc caaagtgcta
       61 atctaatcaa atttttttac cctccactga tagttctgtt ttgacttggt gcttagattc
      121 cacatctggt cactgtgaaa tcccaaggaa gctccttgtc tgggtctcag tcactgcatg
      181 aacagcctgc aaagggactg gctgggtttc aggaggctct gacggtgacc tctcaccgca
      241 ctgagatgcc aaggcagaac tcggacccca cctcagaaaa ccctcctctg ccccctcgca
      301 ttgaaaagtt tgaccgaagt tcttggttac ggcaggagga agacattcca ccaaaggtaa
      361 cacaatcact cctcactttc agcacctggc aaagcagagt gggcaggact gaggctctgc
      421 agcgggtgct gacctgcccc atttcctcag gcagtttgca ggacatgctg ggagctgctc
      481 ttggctgcag aaaaacagca ctgccctcca gcaaagaaag ttctcgagct cggacagagg
      541 ccaaaacaaa ttaatcttct ttccctaaaa aa
//
LOCUS       KCPA01003326             504 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 366655tic ultra-conserved element locus
            uce-1555, sequence.
ACCESSION   KCPA01003326
VERSION     KCPA01003326.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 504)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 504)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="366655tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>504
                     /note="ultra-conserved element locus uce-1555"
BASE COUNT          152 a           88 c           87 g          177 t
ORIGIN      
        1 tttcctaaca ggcaagatgc taattcttta aatggttgga catttactat tttctggcca
       61 ttgactaccc caagcaatca tatttgatgc tccttaatta gagtaccctt ttttatttcc
      121 aggttctttt ccacctcagc aatcgagaca atacatttgc ttaccatgct gctctcctaa
      181 gtgttctttt gcatgtaaat taatcttgat tcagtttaca ctgtcatgct gagtggtaca
      241 aattgcctat aacaataaaa cagcatgagt taaaaataaa ggggggtgaa aaagcagatt
      301 gaatgtgtgc ctcacttgat aggatgttac tttgctttat gccaatacat tagtcgacga
      361 taatgaatct tctgttctga aaagcatggt ttagttgatt tttttaattt tacttcaatg
      421 gagcagtacc ttgtctttta tagaacaagt tagacaaacc attaatgaca agagtgttaa
      481 ggttaaatat gaagcaatgc attc
//
LOCUS       KCPA01003327             600 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 366764tic ultra-conserved element locus
            uce-6517, sequence.
ACCESSION   KCPA01003327
VERSION     KCPA01003327.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 600)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 600)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..600
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="366764tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>600
                     /note="ultra-conserved element locus uce-6517"
BASE COUNT          183 a          127 c          123 g          167 t
ORIGIN      
        1 gaaagtttta catttagtca gtgacaagtt atccacatct gatagtgata aaacaaggtt
       61 ctgtgccgct cattgcccaa aggaaacatt tctggcacat aaaccagctg atagttccat
      121 gttaatggta cttcattgaa aaaatgccat cgtccttcat gtggtgtccc cagcagcaaa
      181 actagtgcca gttaagcttc taacaccaca tatgctcagc tcgtgctact ttctgttaga
      241 ttcagctatt gatgcagcag gtcacaatgc aatttagaag caattaaaag gtaatgaatg
      301 tgctgaactg aaaccactgc ctgggaggct ttttctgtgt acaagggaga tttgtgtcct
      361 tcagtgattt ctgttagtga aacagcaaag aaaaatgctt ctgaaatggg cctcagatgt
      421 ctgaaggaca gtctgaaatg tgagcactgc tgaagcgctg tgatacacca acttaaactc
      481 ctacacacaa aatcaaagaa acttcttaac tatccaagaa ttctccctcc gtattaaggc
      541 tttggggaaa aagactcttg ggataccatg cagtttccac atactgctgc atagctgtgg
//
LOCUS       KCPA01003328             622 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 366877tic ultra-conserved element locus
            uce-5589, sequence.
ACCESSION   KCPA01003328
VERSION     KCPA01003328.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 622)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 622)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="366877tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>622
                     /note="ultra-conserved element locus uce-5589"
BASE COUNT          219 a          123 c           95 g          185 t
ORIGIN      
        1 cttttcaatc tgaagatttc aaaaccaaac acatgccact ctccacactc aacttgtctt
       61 actgaagtcg acaaattaaa agcccatgtt tttcattatg ctgaagacag aataaaaata
      121 aagaaaagga agccacataa gaaagaaaaa cagaatgaca gtgatgtttt agtttacact
      181 agatatggca acacatacaa actgtcaaaa ctatggagtg aaaaaagctg ttatcaagca
      241 actgtcaaga gagtcctctg agatttggaa atcttgtgtt tattgtaact actgcacatt
      301 acacaaagaa agaaacatcc ctcttcttac cattgctgct aaatatcatg caagagaacc
      361 cagacttctc cctcactgtt tagattaatt tttttttcct gtgcaattct gtgcttgaca
      421 gcacagggcc cctccttttt caggtattgt ttggtcaaag ttcagagaga aacttgaggt
      481 tatataaagc attatttcat tttcaagaac tgtcaacacc cattttatgt tgttaacttg
      541 ttgtccatca tttttgacac caaaatacac acttaaaacc cgtatataga aagagcaaag
      601 ataatggaaa cagctatttt ac
//
LOCUS       KCPA01003329             782 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 366985tic ultra-conserved element locus
            uce-2102, sequence.
ACCESSION   KCPA01003329
VERSION     KCPA01003329.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 782)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 782)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..782
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="366985tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>782
                     /note="ultra-conserved element locus uce-2102"
BASE COUNT          272 a          134 c          117 g          259 t
ORIGIN      
        1 gatttggcaa accagactct tttagcaaca tctatagtaa aagttactag ttattataca
       61 gaactaatac ttatgcaagg catagtagta gaaactgtct tcatttctaa gatttcacac
      121 attccctaat taattcaagg ggacttacag ttttagataa cattctttct tttatcacct
      181 gccatctagc agttggtata atgtcaacac ttacattttt tttccaactg aaatcatttt
      241 taaaacattt ttatcctaaa atgttctcct cgatttttca aaaattatct taaagataag
      301 agatttcttt ccatttcagt cccacaacaa cgagaatgtc agcacagctt ttttgacaga
      361 caaattattg aatcaaagaa agaatatgcc attaagccca caggttagga agtgtcagga
      421 atggtttaaa gagatatccc atttatcttc aaaacatgca cggaatgtca ctaatgtgtg
      481 tttatcatgt ataatcagac aaagaaaata tcgaaataaa gtactcctgc atacaataga
      541 agtctccttc catctctcaa gatatcagtg ctattcaaat agaataataa tgatgaaacc
      601 tcctttcttg aaaatggaaa tcaagtgaaa tgtagataga aatgattttt ttgtagttga
      661 tgtacgtttc taaagtgcat taacaggaaa tccagaactt tttaggtcaa ttatattgtc
      721 agtattgtca atgccactga aatgaatacc taagcagtgc atattcttgc tggaacaggg
      781 tt
//
LOCUS       KCPA01003330             602 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 367093tic ultra-conserved element locus
            uce-3622, sequence.
ACCESSION   KCPA01003330
VERSION     KCPA01003330.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 602)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 602)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..602
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="367093tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>602
                     /note="ultra-conserved element locus uce-3622"
BASE COUNT          154 a          117 c          127 g          204 t
ORIGIN      
        1 aagtgacttg gattcacttt taaaaatatt atttgcagac ttgttgactg ggatttttag
       61 tttggaggat gacttgtttt gtccacataa atcccctttg tcaaattttc ccttgacttc
      121 catttcacag ttcttaaacc aaacaaattc cagactgaat tttctgcaag ccgccagctt
      181 tcccaagtgt ctcatcctct cccctctgtc atcctgaggc aatgtgcctg catttgtgtg
      241 tagatttata gtttatcttt atctatggct tcatctgtag gtagctatta tagccgcctt
      301 gcctggatat tgtttgggcc tgatagatct gtctgtagtt catcaaaggg gagctgagtg
      361 gctaaaagcc attgggtcca gctgaggatg aaatacgagc catcagcctt ggtaatggct
      421 gtaaaatttc ataattacac ggcctttatt acattgcata atgatcctga agcagtatgg
      481 aacaattaat taagattttc aaccgtggct ctttcagaaa ttggtgctag tggctgagaa
      541 atggggaagt gtcttgtcct aaaagcatta gggatgctta agaagtactt cctgggtact
      601 ta
//
LOCUS       KCPA01003331             842 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 367204tic ultra-conserved element locus
            uce-3150, sequence.
ACCESSION   KCPA01003331
VERSION     KCPA01003331.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 842)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 842)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..842
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="367204tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>842
                     /note="ultra-conserved element locus uce-3150"
BASE COUNT          219 a          180 c          198 g          245 t
ORIGIN      
        1 ttttacaaaa atgctatttc gtagttatca aacagtagca agcaaaatgt gatagagtat
       61 ctatattact atgtatctca tttaattttg tcttgttgga tggccgtatt aaatatggag
      121 ttttcctgct tatatcttcc aaagaactat tgcatgggct gtaaaccaca aatagcatgc
      181 gtgtgcaaag tatccatgtt tgcgtacttg tggacaagct cttgcagtgt tctaaaagtg
      241 taaagaggaa aacctgcctt tagtttccta ctctgctgga tagctacaag tagaaaatgt
      301 taaaagcaag acagtatgtt ttatatttta cttaagggtt atttttgtgg ttttatctga
      361 tccttttagg atctaaacag gggcccttat tctattgtac ctttttggct ttgtttagac
      421 cagtgatact caacctgtgg ctctagagcc ggatgtggct cttcatggcc ctacaggcgg
      481 ctctcgcaat gtaggcatct gatcggcgct ccactctatc aggcagcgcg gggagcactg
      541 agcaaatgga ccagcagtgt gggagtcgct gaagttcccc ctcccatagg gggaaagaaa
      601 aggagctgct gggatccccc cacaggtaag agtagagatc acctcccacc cagcagctgt
      661 ggggcagaat aaaaacttgc ccttttgccc cttccacccc tccaccccac tccttcctag
      721 cagccagaag gctttgaaga cagaatgctg ctgggagaga ggatgctgat gtgtcatgtc
      781 gtgatgtatc aatgtgtggt ggcattaagg cagcatcatc acacattgaa gtgtcatgat
      841 gg
//
LOCUS       KCPA01003332             886 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 367313tic ultra-conserved element locus
            uce-2028, sequence.
ACCESSION   KCPA01003332
VERSION     KCPA01003332.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 886)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 886)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..886
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="367313tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>886
                     /note="ultra-conserved element locus uce-2028"
BASE COUNT          273 a          170 c          161 g          282 t
ORIGIN      
        1 cattcttggc tgaaactgca cattctcatc tgcctgaaaa tactcagcag tcgttcatga
       61 aaaatgtttt tgaactaatg agctatattt gcattcccct tagaaaggat tcagaatttt
      121 tcatctacac tgcaccatga aaaatggatg tgtttttcac agaggtaatt tgaacataaa
      181 ccaccgcatc aatgggaaga caacctttgc agaaactttt taacttagca cattccattt
      241 gttttcactg gggaaggtca aacttatgtg agagatgtaa atttcatgca caaacctagg
      301 tgctgatgag atttgttttt gtagataatc tgcagcagag aaatttttca taatgtcacc
      361 gcaaaataaa ttaaaatgtt catcttcata tggctggttc cattgcatta aaataaatgt
      421 tgcaagctca tttaattagt atagttagga atgtctcttc cctgcttcac tgactctcca
      481 aatcacaagt taatttgtca aaatcagacc attgtttttc cttcattctt cattactgaa
      541 aagacagccc catttaaata aatgtttatg ctacagagag cagagcagtg aacaacccca
      601 aatattttcc taagcacatg ttggaaaagt ttggagtgca aagagctgga gtgtgcgcgt
      661 gcgtgtgtgc cgctattgga tatttgactg gctggaaagg tacaaaattg agcagcctgc
      721 tgtaactgat gatgtagtgc acaccatctc tcatgccagc ggctacatgc acttggaagc
      781 agttttcttc tgtgttttca atgatgacaa aagatacaat ctctataaat taccctaatc
      841 aaatcattct gttcaagaac tcttggttaa tcaattagtc agtgct
//
LOCUS       KCPA01003333             505 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 367421tic ultra-conserved element locus
            uce-1758, sequence.
ACCESSION   KCPA01003333
VERSION     KCPA01003333.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 505)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 505)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="367421tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>505
                     /note="ultra-conserved element locus uce-1758"
BASE COUNT          170 a           76 c           89 g          170 t
ORIGIN      
        1 aattgtaagg aaacagtagt tggtttaact tggtctcaca gcacaagctg tacattatct
       61 ttaggctttc ttagctttac atacagtcag ataagttttg gctccttctg tctaatgctg
      121 tttcctctaa tggttggaga aatggaacat tatactacct aacgtgtggg ggtcacatta
      181 atcacagaaa attcttttaa tgtctcagaa gtaactgtca aactggacat actgaatcta
      241 tttaaactaa agcatgccat tttttatcta cagtgatctt taattcacat aaaagggtca
      301 agaaaatgtg attaagtgac agttttaaaa tgtactataa tattaaatag cttgattaag
      361 tgacaactat aaaatgtaat acaatattaa gtatctggct gtgtcccaaa agaactttaa
      421 agtattttga atggtttggg aattctgtag cccatcgtgt gttacaaaag agcattttta
      481 ttaaacataa acaggtgaac tcagg
//
LOCUS       KCPA01003334             601 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 367530tic ultra-conserved element locus
            uce-838, sequence.
ACCESSION   KCPA01003334
VERSION     KCPA01003334.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 601)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 601)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="367530tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>601
                     /note="ultra-conserved element locus uce-838"
BASE COUNT          163 a          130 c          104 g          204 t
ORIGIN      
        1 atgacgtgtc cctgtcgcta taatatcaga ggattttata tacctaattt tcaagagatt
       61 cattcatttt ccctaaactt acacttttcc tgccagaaac tttcaaatct aatcagtcaa
      121 cagcattagt cagggctttt caccatttgc tcagcagttc gcagatatgt tttcttcata
      181 gacttttcca ctgtaccttc cacagcctag ctagccaact ctggacagca ggacagctag
      241 atccaataaa tctgagacct gtctaggtgc ttcatttatc aagaggccta atttacccag
      301 gccctttaga ctaattgcag atttgtaaaa aatgctgata atgtagaaca gtgcattgtg
      361 aatgtccctt gccatatttc tgctaatgtg tttcatctgg agtacataaa gagacaggga
      421 tgctgatttt agacacagca ctttggggct aatccagtta aatgattatc cctaaaaatc
      481 tgcagtgatg tcattttccc tatagaactc tgccagttgc cttgtttgct ttattgtgag
      541 aagtatgtga tcccggcttt agaattccct ttatattttt gttctaatgc actgtaactc
      601 t
//
LOCUS       KCPA01003335             709 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 367641tic ultra-conserved element locus
            uce-1677, sequence.
ACCESSION   KCPA01003335
VERSION     KCPA01003335.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 709)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 709)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="367641tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>709
                     /note="ultra-conserved element locus uce-1677"
BASE COUNT          221 a          115 c          133 g          240 t
ORIGIN      
        1 ttcaaaggtt tcttgaaatg atcaagtcaa gattcctcaa ctttaaatca tgctttggtc
       61 ttgcttttaa acgcacctaa tattttctgg tcataccccc tatgttattt aaatgctggt
      121 aatcttgttc atggcaattt caataagcca cagcagacat ataatgcttc ctcttttaat
      181 aggttcaaag tgagttattg tcacaaagca tatatatgaa aaaaagatgt gaaaagagaa
      241 tcctgcctaa tctctgtaat aagggcttgt gagggtgcta acatggtcac ctgaattatg
      301 catgtctatt gtgttcaaat atcataaatc gatgcatgaa taccctccaa atcattttca
      361 gttcatgaac atttatatac agagctcttg agcactgcaa agacaattag tcatatttgt
      421 atgccggaat taattgagag tgagatgcgg gaggcagaaa gagagaacaa agaatgcttt
      481 ttgtcagttc ttccaactga cagggataat tagatatatg aaattgaaat tcctcagcag
      541 ggggtttctg ttgacaatga attttctttt gattccattc tgttattctt ttatgctgtc
      601 atctgtggca atttgttatt cagcttgaag cttaaaaaag caaagcattc cgcttttatg
      661 agtagatgat gtcagtttgt acactgctgg gaaatagata ttaaatgta
//
LOCUS       KCPA01003336             700 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 367753tic ultra-conserved element locus
            uce-735, sequence.
ACCESSION   KCPA01003336
VERSION     KCPA01003336.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 700)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 700)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..700
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="367753tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>700
                     /note="ultra-conserved element locus uce-735"
BASE COUNT          262 a          128 c          130 g          180 t
ORIGIN      
        1 ttttaaattt acctaccacc caattaagca atgctggttt taaagtctta aaggacaact
       61 aaaccaaagc ataattctca ctgtggtaac attggcaatt cctataaaga aaccaaatgt
      121 ttatgaaagc gtgtaacaca ttcagaaaaa catgcactta aacattcttg gcaagtaaaa
      181 gaggaaggta ttgcttgaaa tccataacaa gggattagat gtccttaaag acagttgttg
      241 cttggaatgc ataaaatgtt taatgaagta aagtttaaaa acctgttgcc atgagccaaa
      301 aatactggat gtgaaagcca gtgatttagg ggagacaggg gaagaagtga tttgttcccc
      361 tgatctgcgt cttcgacgcc cagtacccac accactggtg taatgcagcc aggtaccaat
      421 acactctggg ctagacacac tcagggggct ctcttcctgg aagtgagaaa gggggcaaaa
      481 aacagcaaag catgcaaagt tagattcaac agagccaaat gaacagaaaa gaaaaaaacc
      541 caattttaca tactaccaaa actattaaac agcgaagaga gaagatatta gaaagttatc
      601 agtttcactt ttctcttcat ccaactacaa cacttcaatc aaatttcttg tggactaaat
      661 atgagagaaa acatttgtta ttaattcata attttaagaa
//
LOCUS       KCPA01003337             520 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 367863tic ultra-conserved element locus
            uce-6076, sequence.
ACCESSION   KCPA01003337
VERSION     KCPA01003337.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 520)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 520)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..520
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="367863tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>520
                     /note="ultra-conserved element locus uce-6076"
BASE COUNT          181 a           94 c           77 g          168 t
ORIGIN      
        1 tggccacaga aaattacaaa tatttcccta attccttttc ctaaaagtct ctgtgaaatt
       61 tgctttactc atttcaattc atagatagta cattaaagca gcaaagatat atccaactgt
      121 ttaaatatgg agctgaaaac cctaatcaca atttaatttg actaaatact tacatacttt
      181 atggtcaatc atccagatcc tttacaaggt tccttggctt tggaattagt aatctcaaaa
      241 catatgagcc ttgtctaaca tgacatatat tgaaacagac tgtggaacga tcacttagag
      301 atgagaacct tgctacagtt ttagtgaacc aaagctaaga ggaaaattat tcaattatag
      361 taaatttaca gtaacttcgt atttgataaa agtggttctt ctatcatcag agcatcgtat
      421 tgaaaaccct tgcgcagcaa aatagctcta gaaatgccaa ggatgtttta gccacttatt
      481 aagaaaattc atctgtcctg atttttatga acactatggc
//
LOCUS       KCPA01003338             731 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 368059tic ultra-conserved element locus
            uce-1135, sequence.
ACCESSION   KCPA01003338
VERSION     KCPA01003338.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 731)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 731)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..731
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="368059tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>731
                     /note="ultra-conserved element locus uce-1135"
BASE COUNT          219 a          149 c          144 g          219 t
ORIGIN      
        1 acgtcctttg tggtttaatt taaatggtga tttttaccgt gacacgtgat gttcatctgc
       61 taacctttcc ccaattttaa agaagcatcg aatctcggca gcctctatct atagacacgg
      121 tagtttacct acttaggttg gtacctagga gcttgtaaac aaattcataa atttgtcatg
      181 atgattatag tgttggcaaa cacaatggtt gatcatgtta taaatgttta tcaacacccg
      241 cactcaccca cctgctaaga ggtgctacgc tttaatgaaa ttgtttgaat atcaaggctg
      301 gttgctaaga tacaatgttc ttgttaccag ggatgtgatg cttacagatt tctgttatca
      361 aataatgatt agagatgtgc taacctcaag gtgctcggtg cagtggaagg cttactgagc
      421 cacaaattag taaactgtct gcctgagcag acacttacag aaggagcaca tgtgcatcaa
      481 acttactgag ctgacatttt taaagaagac aagatctggc agtgtaaatg ttcctataga
      541 tgatgaaaga ctgtcatagg aaatgtttac atgatctgtt gcctagcaca atgtcttcgt
      601 gccattttcc ctcccgacgc agaacagcgc tgaaatcacc aagtcaaata actgctttct
      661 tctttgccac tcacctcttg aaattacaca ttcacaaatt tctaagggcc acgcaaagat
      721 ggaaacaagg a
//
LOCUS       KCPA01003339             780 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 368171tic ultra-conserved element locus
            uce-146, sequence.
ACCESSION   KCPA01003339
VERSION     KCPA01003339.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 780)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 780)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..780
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="368171tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>780
                     /note="ultra-conserved element locus uce-146"
BASE COUNT          249 a          149 c          163 g          219 t
ORIGIN      
        1 gcagtgggaa ttctttttaa tgaagcttga tttaatccca ttattctaat aaagagtaat
       61 caattggcag aaaatctgaa ggtctacaga ttggagtcgg gttgttttta agacaggaga
      121 tgcaatggag gagaagtgag ttaatcagct tttggtccac taatccccac ttcctgcagc
      181 gagttggagt tttgaaggag ggcaatttgg aagctgtctt agcataaatc tccagcaagt
      241 ccgtggctgt ctggggggaa caagcccctc agcattcacc aagacacgct tcaaggagat
      301 tctactctta atccaattta ctcagccgaa taagtcccac tgcttcagct tgccaacaaa
      361 ttaaaatcca gcttcataaa aacaccttga atttggaagg tattggctgg cctgctagac
      421 ttgaaacttc atttattctg gctaacttct caattatctt cccagcagtg gagatgtgta
      481 aaagtgcaaa aatcaatagg attctattcc ctttctattg gaaagggaaa aattaatgag
      541 ataggacact ctcttaatca gaaataaatg ttttaattca gataatgaca tagttttccc
      601 tcgctgaagg atgacaaatg ctgggctgca cccccagcag aagcagtttc aattttattg
      661 taaatataaa aggtattgat cggtgagatg cacaaaccct attgcttaca aaagccattc
      721 agggggactg ggaaaactat taagcactgg gtcagaaatc aataaacaac actgaaatgt
//
LOCUS       KCPA01003340             405 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 368276tic ultra-conserved element locus
            uce-2007, sequence.
ACCESSION   KCPA01003340
VERSION     KCPA01003340.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 405)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 405)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="368276tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>405
                     /note="ultra-conserved element locus uce-2007"
BASE COUNT          141 a           71 c           73 g          120 t
ORIGIN      
        1 tttctcgatg tacttttgaa agctgtgggg aacggccaaa caaggtctta aaacttctgg
       61 catggtgcaa gaaagagtta agtctaacaa gcagaaaaaa agaaattaac taaagtaagg
      121 cccttgtgat acaatgacac ttgctctatg ctcttacaga gaaaaacacg atgataaaac
      181 accacaaaga ggagtgttat gaattttatt aatgactaga agacagtgtg caaaacatca
      241 aaggtctgtg gaaaagatta atgaccccgt gtgagactgt ttaattacct ccagctaatt
      301 agattcttga ccaaattttt aatatctgca ttccttctaa agcctaattg agattccaca
      361 ttatttatca atctttcaaa aagcccttag tgtgctgctt ttttt
//
LOCUS       KCPA01003341             397 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 368378tic ultra-conserved element locus
            uce-4440, sequence.
ACCESSION   KCPA01003341
VERSION     KCPA01003341.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 397)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 397)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="368378tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>397
                     /note="ultra-conserved element locus uce-4440"
BASE COUNT          139 a           55 c           78 g          125 t
ORIGIN      
        1 tcttcccact gaagcaagca ctgttaagct gctataactt ttagagcatg aaagcaaatg
       61 ttgtaaagag gtcactgtaa aggtcgcgca gcaggtttga tgtgtcagtg gataaatgat
      121 gggatcacat ctggaacagt ttggtgaata aataaaatgt gaaagctcat atatcactgc
      181 ccaccttcca atctgtaagg gaaagagaaa ataaattctc taataacctt gtaaagcaca
      241 taaaagatat tgaataaact cttgaaattt tgtgactaaa actgtctgta ttaaataatg
      301 attttaagag tggcaaaaag cttgaaatac agtatgagtc ttccttgtaa aatgttggtt
      361 tattttatgg tttatttatt agactatact tggatag
//
LOCUS       KCPA01003342             779 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 368491tic ultra-conserved element locus
            uce-5387, sequence.
ACCESSION   KCPA01003342
VERSION     KCPA01003342.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 779)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 779)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..779
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="368491tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>779
                     /note="ultra-conserved element locus uce-5387"
BASE COUNT          251 a          149 c          155 g          224 t
ORIGIN      
        1 aaagagcaaa taaaagcctg ggaaattctg tgttgatcat atggggcttt cccttaacat
       61 tcaatgttag aatattaatt tactgttgct tttatgctaa aagaagtgaa caaggaagga
      121 gttctattga aatagagcag ctctgaggat tttgagagca gtaagaaaat ataagtatca
      181 aaataattca gaaacagtac aaggcacagt ggcacattat caatttacaa catttaaatt
      241 gataaatgct tggtggtgaa ggcctacaag ggcactttga aaagcaaata gcgacctgct
      301 gaagaaattg atttttcccc cccgaaaatg actgcatgat gcatcatttg actgcatgct
      361 gtccaagtgc ttgacagaga taatctcagc aatcccacgg gtgaccttat cgttctcacc
      421 agggcaactt tgtctaggtt ctgactttgt gcatgtcaag gtttcttcag gcaggatcct
      481 tagggggaaa aagttcctct gttcgatcca gatattgaac cactcttgaa ggcgctccca
      541 aaaaggcaag ttttcttcat aattatgaat gaactgaaca agggaaaata tctatagaca
      601 cagtatcttt gctgaagcca ttattgcctt ctcagtgagt ttagctctta aaggagaaag
      661 ggtacctgcc attagaggtt atcagacaca attgaaagac tccaaaatat atggcactct
      721 tctacatagc agaaatatcc cacctgcttt ctttatcaca ctcactgttt acagcttta
//
LOCUS       KCPA01003343             482 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 368601tic ultra-conserved element locus
            uce-3053, sequence.
ACCESSION   KCPA01003343
VERSION     KCPA01003343.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 482)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 482)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="368601tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>482
                     /note="ultra-conserved element locus uce-3053"
BASE COUNT          141 a          106 c           90 g          145 t
ORIGIN      
        1 agaagtttct cttcaatatc ctttacctaa ggaagggctt gggagggagc agttgagatt
       61 ttttttcttc tgtgatggga ttaagtggga cctgctcctt taaaaagtgt ccccttcccc
      121 atcatcctct cttcttccaa ttacagcact aatttcagta atggagcatt aatggagtaa
      181 tggactgctg aagctggcct gaaggaactg tagagctcag cacaaattga gtaaataaac
      241 catatattag atttctaaac aatactttta gtctagtccc cagggaaaga gagttgtcaa
      301 gacttactta agtcaaccca gcaaaacgta tgcaaaagat ccacccattc atagcctgga
      361 aaatggcacc agtggcctga agcatgagca aatctctcac ataaatctct cctatcctga
      421 cagagagagc tttgtgttgt ttccttctcc caattcctct tctttgattt atttaccaat
      481 aa
//
LOCUS       KCPA01003344             520 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 368711tic ultra-conserved element locus
            uce-7923, sequence.
ACCESSION   KCPA01003344
VERSION     KCPA01003344.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 520)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 520)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..520
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="368711tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>520
                     /note="ultra-conserved element locus uce-7923"
BASE COUNT          176 a          114 c          134 g           96 t
ORIGIN      
        1 aataaccgag gtgacgatga agtgtttgag actaaatcaa gggatgatga ggctaagcca
       61 tttggtctgg cagtggaaga cagatctcaa gcaacaacac ctgacacaac accagccaga
      121 actccaacag atgagagtac gccaactagc gagcccaacc ccttcccatt tcatgagggg
      181 aagatgtttg agatgactcg cagtggtgca attgacatga gcaagaggga ttttgttgaa
      241 gaaagactcc aattttttca gattggtgag catacttctg aagggaagtc aggggacaag
      301 ggggaagggg ataaaagtac agtcactgcc atcacacagc cacaggcagg ggacagcact
      361 gtagaaacaa acctagagag accagcaaca gcagttgaaa ataagcccgt catccaggcc
      421 agtggagatt gcatggaaca aacacttggt agtaactcac tggagaaatc atcggcagca
      481 gtaaacgctt ccaaagttga tcccaaattg cgcacaccaa
//
LOCUS       KCPA01003345             628 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 368814tic ultra-conserved element locus
            uce-7192, sequence.
ACCESSION   KCPA01003345
VERSION     KCPA01003345.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 628)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 628)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="368814tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>628
                     /note="ultra-conserved element locus uce-7192"
BASE COUNT          205 a          116 c          117 g          190 t
ORIGIN      
        1 ctttccagca aaagtaacca catgcttaaa tataatgtct aaagctatta ataatgaatc
       61 atttgggcat ggcaagagtt cttcaaaaca gtttgtcagc gctggccaag caaagtcttt
      121 cagcaggaga tgagacatct atgccaccat gcaaatgaga caggcttgaa atatgatgaa
      181 tcttctatct ccttttccta ctcgactgac actcgctttg aggaaggttg taaatgcaag
      241 agagattgtg gtataattcc tcagactggc gtttctgccc cccagtcact attcgattat
      301 cttccaaatt gctgtgtttc agagagataa agatttttta tggcttgctg acttgaaaca
      361 accagaagag ccagaaaaga gatggctaac cggccatgca tagtaattcc attggtaaat
      421 gacaaaatct ttgtttgtat gacatttcca aagttactac agaagatgaa tctaaaatac
      481 aaaatgtcac atttggcatg caaaactatc acaatatatt tcagtataaa attcatagag
      541 gcgtttaatt tagaatgtgt ttaataacga aggctgcctg catcagtaat cctgccttga
      601 ggtttaaaaa gattgtctta tttattca
//
LOCUS       KCPA01003346             319 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 368923tic ultra-conserved element locus
            uce-3219, sequence.
ACCESSION   KCPA01003346
VERSION     KCPA01003346.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 319)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 319)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="368923tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>319
                     /note="ultra-conserved element locus uce-3219"
BASE COUNT           84 a           68 c           58 g          109 t
ORIGIN      
        1 agagctcctc agttcaatca tgctagctta gaaaacagca gtagcagttt tctctttaat
       61 tgttctatgc ataagcagtt ttcaaaatta tgagactatt cccaccaaat tacccctgat
      121 aattctattt tatgtttttc agaggaacag aacaatggac ctaatacctc aaatctctga
      181 ttgctgactt tctttccttt tttgttccag acaattttag gtcttggatc tcctgtggct
      241 tgacagatga atgaggcaac tcctcctgaa acccctgtct ggtcaacggg agttcttgta
      301 aactttggtg gtgctggaa
//
LOCUS       KCPA01003347             691 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 369028tic ultra-conserved element locus
            uce-1336, sequence.
ACCESSION   KCPA01003347
VERSION     KCPA01003347.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 691)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 691)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..691
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="369028tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>691
                     /note="ultra-conserved element locus uce-1336"
BASE COUNT          225 a          149 c          137 g          180 t
ORIGIN      
        1 tgcagtaatt catcccattc agaagacagg acttaaaaat gtttaaacaa gattgaggat
       61 aacaactaaa aggtgcccac aagagacata tttaaattcc tgctaaatat atttacctaa
      121 gtcaacagcg aagttttatt tggcaattct gcattttaaa gctattgtct caattaggcc
      181 agaaaggagg atactgctta tgactgcaag tctctgcctg cattcattta ttgttcagtt
      241 cacagtctct gaatacaaca caatcctcca acggagtcag ctttcataat tcagcagtac
      301 aaagtctgca aacacatgta acctagatcc atatttcaca gtgacagcat atgatagcag
      361 aatgtgaagt attaatgcta gtgtcactac agtcctacac tctactgcac tttaagagaa
      421 agcagctgct gagatgaaat gtgtgccaac tgtctgaaga cagaaacata agaaacattc
      481 cttctgttac aaagggagag acacacacaa acagactttc ttttagactc aacaagcaca
      541 aagtttctta ctttctccat ttatgtttct atttcagaac cactcgcgcg ggagagacgt
      601 gcctgggtgg gaggggcacg gagcagctcc cgaggcacag cagtgacaca tcagtacagg
      661 gaactgctgg aatggtgaca ccgatctggc a
//
LOCUS       KCPA01003348             404 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 369136tic ultra-conserved element locus
            uce-3318, sequence.
ACCESSION   KCPA01003348
VERSION     KCPA01003348.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 404)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 404)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="369136tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>404
                     /note="ultra-conserved element locus uce-3318"
BASE COUNT          119 a           99 c          109 g           77 t
ORIGIN      
        1 ggattagccc tgcaaacatg cgagtgccgg ccaaaggcga gagaaacccc actactgtaa
       61 ccaaaatgca tgcgctgaca ggagaccggg acgggcccgc ggctccccgg gagaaaatgt
      121 agctgtgatg agtgacaggg ctttcaggaa atatgttcac aatcacagac agtgaaggcc
      181 atgacctaga tcgtttaaga gcttgtcttg tcaaattatc aaaagcttct tcgtctctga
      241 ataaagagtg acataagtga gtgtcagaaa gctgcaggct gacaagccaa gcatacaata
      301 acagcatgca cgtcacatac ttggcgaaca ccgccacggc tagcggcaaa tcttaatgag
      361 agcgcggctg gcccaggaga cttgggtccc tgctggcata gcta
//
LOCUS       KCPA01003349             379 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 369242tic ultra-conserved element locus
            uce-4021, sequence.
ACCESSION   KCPA01003349
VERSION     KCPA01003349.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 379)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 379)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..379
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="369242tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>379
                     /note="ultra-conserved element locus uce-4021"
BASE COUNT          139 a           65 c           69 g          106 t
ORIGIN      
        1 ttcagcatta ctgaaatagt ctaggctact caattctctg tatttcactg catgtgagca
       61 tgcttcattg caacctataa tgaaatgctc aaatttacag gcactgctaa gcgtgtcagt
      121 caggcagcac aatctttaaa aaataacctt acagaaagtc aaggtttaaa aggatttatc
      181 aaaatggaat tgcttaaaat gaaatttcag ttcaggcact taaaatatga agctacatta
      241 aaaggagtca agaaagggaa agaaggggtt cattagaaat tcattccctg caatgccttt
      301 cactcctgca aggttgcctt ttttcaggaa gaaaaaagta aaaaaatcaa tactggttaa
      361 taaaacatca ggtgtgcag
//
LOCUS       KCPA01003350             709 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 369352tic ultra-conserved element locus
            uce-2578, sequence.
ACCESSION   KCPA01003350
VERSION     KCPA01003350.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 709)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 709)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="369352tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>709
                     /note="ultra-conserved element locus uce-2578"
BASE COUNT          223 a          156 c          128 g          202 t
ORIGIN      
        1 acagtagctc tgaataatat tatttcagtg aacaaagaat ataaggaatg tgaacatgac
       61 tatatgttaa tttttcttac tgatttccgt taaactttga atctttggcc aaaaaaaagg
      121 cagacttgcc cacatttaca caaataagct aatgtgcatt ttgtaaacat tctgaaacaa
      181 aacttcctgc aagtaacatt tatccaaatg aagtttaagc aaaagccttc ctggacacac
      241 tttgtaaaaa agccattatg gcatataaag ggttagcact caaaactaat tgggattttt
      301 tttttccccc agcaaatttg gaaatgaact gaagctgctc cctggtgtga aagctgaatc
      361 cagcagccac ctgcaggatc agcgaccagt gctgccagat gctacaaagc ctttgatttc
      421 cagtagcgat ttcagacaca tttaactcat gtgacatgaa ctaaccggaa tagcatattc
      481 aatcacttta caaactctgg cttttctgct ttctatatac gaaacagctg cagcagatag
      541 acacattcag actcacagct tgcgccctgg ttttcctaat gacttccatg atggcatcca
      601 tgttaaggta gcttttgctg gtgggagctg ggccaacaca gacagcttca tccgccattt
      661 tcacgtgaac ctgaagaggc aatattctgc attaacagat gctcccagc
//
LOCUS       KCPA01003351             468 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 369456tic ultra-conserved element locus
            uce-6508, sequence.
ACCESSION   KCPA01003351
VERSION     KCPA01003351.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 468)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 468)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="369456tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>468
                     /note="ultra-conserved element locus uce-6508"
BASE COUNT          171 a           69 c           81 g          147 t
ORIGIN      
        1 aacagagtta atcaagctca gtctgcaaaa tacagtgcag gtaaactaca gaaaagctta
       61 aatattggaa atctctacca aaagtgcaac cttcttctct gaaggtgtta tttgacattg
      121 ctgaaggttt catcttgatt actttcaata aaatccaaag taaggatgac tgccttggct
      181 cagtaagcaa caaggtttta tcactaatta caatccttta ttaccagtag tttaataggt
      241 ttatgatagg tcataaaaca attcagcatg ggagtacata aaaggaatag gttatacagc
      301 tgtgacatct taatatctat tcattgtaat cattttatga tctttaatgg tagcattttt
      361 ttaataagtt tgtacatgaa atagatggcc accaaaaatg ggaggtgaag gaaaaccaca
      421 taaatataga gtaaaatact taatgaggca ttttgaaaac ttctaatg
//
LOCUS       KCPA01003352             639 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 369566tic ultra-conserved element locus
            uce-3320, sequence.
ACCESSION   KCPA01003352
VERSION     KCPA01003352.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 639)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 639)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..639
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="369566tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>639
                     /note="ultra-conserved element locus uce-3320"
BASE COUNT          193 a          123 c          120 g          203 t
ORIGIN      
        1 tgcttctaca attatgcaca atgcacaatt atgctcttcc tgcacaaaga cttagcaacc
       61 accaaactcg ttttcttttt aaatacactg aaaagagtgt agatttcaat ccttcatctg
      121 ctcacagatg aaataacatt tccaaatcat cactgatagc atttttttcc tcccattcta
      181 aggatggcca actgttctca gcgatttcta ttacatttcc tacctattat ttcatgtaat
      241 ggcattcctt aaattttaaa ttagctttga agaataaaaa taattgaatt cctgctgttt
      301 tgtgtacata gagggtgaca ggagctaatg tgataattta aactgtaaat gagtcttcac
      361 tttgtgttca ttaattacag ctaattactg aattacaaac cttcttggtt aggcactgtt
      421 atgtattcat gtagcatgtt ggatttccag ctggtagaaa actgttttat agacttacaa
      481 gctgacacac caagctagct agaaacaatt ccgtgggaga aataaaggga gggcgggggg
      541 cacacgctcc tgctctttga atccaggcag cgaggagaaa caaacccaag tctcaggtga
      601 gccaggcgtg tggataatta ggatttgctg tatttggga
//
LOCUS       KCPA01003353             681 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 369674tic ultra-conserved element locus
            uce-421, sequence.
ACCESSION   KCPA01003353
VERSION     KCPA01003353.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 681)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 681)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="369674tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>681
                     /note="ultra-conserved element locus uce-421"
BASE COUNT          208 a          129 c          108 g          236 t
ORIGIN      
        1 ataaatacaa atgcacacag aaagttaacc agaatacatt ttcttatttt tcatggcagc
       61 acaagctctg tctgctaacc cctcagtcac taattcacat tcttttaaaa aaaaaatatg
      121 cttctgtgct ctagttttaa aatgcaaagg tatgatgtta tttgtcacca tgcccaaaaa
      181 agtccttact cggtaacttt gccagaagag ggagagagag aggcaaatgc tcccccagct
      241 gtttcctgtc tacagtgtct gtgtaatgta gataaatgtg aggattttct ctaaatccct
      301 cttctgtttg ctaaatctca ctgtcactgc taaaatcaga gcagatagag cctgcgcaat
      361 ggaataaagt cctcaatatt gaaatgtgac attgctctca acatctcaca tctctctgga
      421 tttctttttt ctcatcatta ctgctaacaa attcatttcc agactttgca ctttcaagaa
      481 gcaatggaaa aaatcaacag tctttcaaca caattagtta agtgctgctt gtgtgatttc
      541 ttgaaggtaa atctttatta ctatttcaaa taatttttta gttttatttt gctgtgtatt
      601 gtctgctgct ggcttgagga gtattgtgca cttttcaata acattatttt agaaatgaaa
      661 attatttata aattgctgaa c
//
LOCUS       KCPA01003354             419 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 369779tic ultra-conserved element locus
            uce-5173, sequence.
ACCESSION   KCPA01003354
VERSION     KCPA01003354.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 419)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 419)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="369779tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>419
                     /note="ultra-conserved element locus uce-5173"
BASE COUNT          145 a           75 c           69 g          130 t
ORIGIN      
        1 tttttaatac atgctttaca ttaaagaatt tcttggacag ttgtgctatt tctaatcagg
       61 cccatggcaa atactcacca accctcacag gaataaacta ttctcacttc aaacaattgt
      121 tacagtttga atccaattga ctctagacaa aagtactgag ataatcagca tattaaagcc
      181 aacactataa ccatatgtta attatgtaaa tgattcattt taatcagcta gaaccatgta
      241 aagagttaca aggaatgcaa atgtagggag ttattaaaaa tctcattatt attcatcttg
      301 gttccatgcg tgaatgtatc catccaaaca gatgaattaa tagttagatg aaagatgaaa
      361 gagctagagg ggaagtctgt gggaaaccat ctgtcttgct ttgtatccct cccaggctt
//
LOCUS       KCPA01003355             528 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 369889tic ultra-conserved element locus
            uce-5922, sequence.
ACCESSION   KCPA01003355
VERSION     KCPA01003355.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 528)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 528)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="369889tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>528
                     /note="ultra-conserved element locus uce-5922"
BASE COUNT          189 a           89 c           74 g          176 t
ORIGIN      
        1 tttggtgcat tagcacattt catgcaaatt tagtgagaaa atgactcctt tatgtgattt
       61 aatattcatc agtgataact cataatgtcc tcacacgaag aaagaaatta aaaattcatt
      121 agaaaactag aacactatat ggttaaaaat attaaagcat atttcagtgt tttgcttaca
      181 ctagtgttct catcatggtg ccaccatttc atggcaaaga acatagagga gaaaacattc
      241 aacttaaaat gtctgctggt acacatcact ggatttgtat gtcaccttga ataccaacta
      301 tttaattagc acttttgcca gtcatgcata ggagacagct catttacatg catcatggtt
      361 actgattatt cccaaaaaat ttacttcata ttctagtatc atccattatt acaaaaatca
      421 aattaaaaca tgtaaagtct ttatttctct tgtaggtata tttcattaat ttaaccttaa
      481 gtgtggcata gaagactgaa tacaactaat cattaagaac ttcaaagg
//
LOCUS       KCPA01003356             561 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 369997tic ultra-conserved element locus
            uce-3736, sequence.
ACCESSION   KCPA01003356
VERSION     KCPA01003356.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 561)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 561)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="369997tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>561
                     /note="ultra-conserved element locus uce-3736"
BASE COUNT          164 a          140 c          121 g          136 t
ORIGIN      
        1 ggaaggtgtg cggccgcccc cgcgccctgc cccacccagc ccggccggcc ctcctcgccc
       61 cggcacaaag cacactgccc ctattctttc ggcctttgta gccatatggc aaatccatgt
      121 agacacagcc aacatccatt tattcaggca cataatgtcc cgcaacaggg aacaattgga
      181 actttgtttg cttctattat tgatgcgaat gggcgacaga gagagagaga gaaaaaatca
      241 tttaactata agagatatcc agctaattat gaaccatatg tgcctatagt ttcaaagcaa
      301 tccaatgaag ttcattttaa atctagacta ctttattagt acggaagaca gatgtctcaa
      361 cagtacatgc atcagaggaa accatgtaaa gaagttcttg aaatatttaa ctaggactca
      421 ttcattgtca gaggggcttt aaagtgccct ttatcatgag aatgcatagg cagaagcgga
      481 gggaggctgc cggttgttac cgccaaccca cccccttagc gctaaatccc gaattccact
      541 ttggatttgg cgacaggaat a
//
LOCUS       KCPA01003357             736 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 370105tic ultra-conserved element locus
            uce-7559, sequence.
ACCESSION   KCPA01003357
VERSION     KCPA01003357.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 736)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 736)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..736
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="370105tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>736
                     /note="ultra-conserved element locus uce-7559"
BASE COUNT          205 a          169 c          156 g          206 t
ORIGIN      
        1 tataaaactc ccatttgtgt gatgcaagcg ggatagtctt tgaatacttc tgtctcgagg
       61 aattctttat tttgccatag aagaaaaatg ttttcatatt ctctcctgcc gtgcagacct
      121 gcagcccggc gagccctttt gcccttgaga gccataacat tatttgttaa catctttatg
      181 atgccaaatg gtctgtgcta gaacgggtgc cattctttag ctgggaaacc atatggcatg
      241 ccgagtaata aataaggtat tgtgatagtt aatgaaccta attgccagca aaggctttaa
      301 tacagggaat gtgctgctga gaatttagca ccacattaga gatgcagcag agctcctctg
      361 acttctgagg cttaatttaa gttctatatt gcaaactcca gaaaataatt ccaaaccctc
      421 ctgctggaaa agcaacctgc tggtagactg tgattatact gaattactaa aatcgcaatc
      481 aattttatac actctgttaa cccttgctgg ggaacttggc tctccaggag agtaagggat
      541 gccactctga agaggtacca gagccaagtc agttggagca tcatggccat gactggtcct
      601 ctcccctggc atctccctct tctgggagat tccctgcccc atctgcctac caactaatct
      661 ggctgtgggc aaagagggaa gaaaagccac aactgtgaat ggtcatcgct atttctctgt
      721 gaccaaccaa acaaat
//
LOCUS       KCPA01003358             418 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 370209tic ultra-conserved element locus
            uce-6721, sequence.
ACCESSION   KCPA01003358
VERSION     KCPA01003358.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 418)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 418)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="370209tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>418
                     /note="ultra-conserved element locus uce-6721"
BASE COUNT          102 a          108 c           89 g          119 t
ORIGIN      
        1 gaaaaagtga cggaaaagcc aggccggccc cacctcgaag ggtctggaat gtgtttgctc
       61 cggtgccggt gttgggtttg taacgtgaac cctctgcaaa tacctccggg gcagacaggt
      121 ccctttcggg ctgtgtttat ttaataaaga gccagtgaag taactgcaat ttcattgtca
      181 atttactaat gcgttacagt tatgtttctg aacctcattg tttgggctca ggagctccca
      241 gtgcctggcc aaaactttcc cccccttatt cctcccctca agtgtaaaac acgttttatt
      301 atgactagaa tgtcttctat ttatcaaaaa ctgggattaa aacccttgac tcccctccat
      361 gcacatatcc aacttggcag caggtcggtg attaacctcc tgaaagcctc acttgctc
//
LOCUS       KCPA01003359             520 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 370316tic ultra-conserved element locus
            uce-1454, sequence.
ACCESSION   KCPA01003359
VERSION     KCPA01003359.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 520)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 520)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..520
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="370316tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>520
                     /note="ultra-conserved element locus uce-1454"
BASE COUNT          184 a           78 c           78 g          180 t
ORIGIN      
        1 taccatgagg atagaacaaa agaaattaaa acactagata tgccacagtt gtcttatgca
       61 gctgttagaa atttaattat tttatctcat agaataatgt gcccttcaga aatcattttg
      121 gactagatgt ttcaaaccaa tgatctgtag ttaattatct ttaataactg ttgcacatta
      181 tggttagatc tatgtttttg ctaaaccaat taataatatc ttcattagta taaagacaag
      241 gtaactggat cctttcattt ttcacattga aagagtagat attttaaaca gtgtaattta
      301 ctttagccat acattcccaa tgatatgact aattaatgaa acttcaaaga catataactt
      361 ccaaaagcta cttatttaaa gtcattgttg agcacttaat gacattatgt tggggcattg
      421 cagaaaccat cactgcctga gtgttgaatt tgctaaacct ttttatggta ccaaactgaa
      481 ggaatcttga gttatattga aaagtaaatt gagccaatat
//
LOCUS       KCPA01003360             730 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 370421tic ultra-conserved element locus
            uce-5917, sequence.
ACCESSION   KCPA01003360
VERSION     KCPA01003360.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 730)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 730)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..730
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="370421tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>730
                     /note="ultra-conserved element locus uce-5917"
BASE COUNT          221 a          131 c          154 g          224 t
ORIGIN      
        1 gaaagggtca aatccagctg ctttggcttc gctgcaaact ttatttctca gagaagaaga
       61 agctaatatt caacgaggct tcaggaaaaa agggcttcca agatgttaca gattttggaa
      121 atatttgaca atgttagcag catcaactac tgacacaaaa ccctctctcc agaaaatctt
      181 tcacagttgt gccaagaaaa gcagcttcga tggaacattt tcataaacta tcatcagtta
      241 tgcagcagca gcttcacaaa tcagaaatga tatcttcagg cactgctgtc aagtgttatt
      301 caaataatac cagcctcaca tttgaataac agcagacatt ttgaattaat taatcagatg
      361 agatagtcta ggccttttct cattagtctc tgggtcaggc atggaaagat atatgcgttg
      421 gtgatgatat acttgtcttt aatcgtgatt tatgaagatt taggattgtg tgtgatttgt
      481 caaaggttct gggaaaaggc tggtgcatat ttcattacct aatctgagat tgattttgtg
      541 atgctgagag atagaaccct attgttgggg gggctgggaa gtgcaggtag acacagcatc
      601 ccagggtttt actggcttat ctttgtgact gtcaaacaat gctgtaaact tttactgcca
      661 gcagttaaca attcctactt taattatagg caaattcttc attccgttca acagggaagc
      721 tgcagtagtt
//
LOCUS       KCPA01003361             745 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 370535tic ultra-conserved element locus
            uce-6989, sequence.
ACCESSION   KCPA01003361
VERSION     KCPA01003361.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 745)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 745)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..745
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="370535tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>745
                     /note="ultra-conserved element locus uce-6989"
BASE COUNT          224 a          139 c          146 g          236 t
ORIGIN      
        1 tttagctaca gagtaaagtg agtggacaaa tcttttaatt aacctccgtc attatacatc
       61 atgccctctt cattaaatag atgtaacagg gagaaaagcc agttgtttct aataattttt
      121 tagtgctttt gtggtttgta tacttcagtg ttctgaaggt cggatagaac taccagacca
      181 taaaatccag ccagcgagag atctggagct aagagagctc aaggatttat taagtgatgt
      241 gaaactctat tgttttgtgc atgtgttaca taattgctgt cagtgcaagg ctgttaaaat
      301 tccctgctag taataacacg aataccattt tatagcttca agaggagata aaagaagttt
      361 cttagtcagc acttcaacaa tatcacagca catgtcagtt ttattattct ggggccttca
      421 gttttggcag atgctctcca ttctggctgt ggtgtggtaa ttaccatata aattaagcag
      481 tgaaagagtg cagccttatc cctgctgcct gtaaccaggt tgcaagtatc acagtgtgaa
      541 acaggcataa ttcaggctga ttatgtttag aaggccacat tttgaaatcc tggaccttta
      601 tcccaattcg agtcaatttt aaaagtaaat tgaagccgtt taatagctgt gcaaacagaa
      661 ggatcattct ttctccacaa ggtactctcc ataatagcat tccaggaatt agttcaatcc
      721 atcctggttt gattcatagc cacta
//
LOCUS       KCPA01003362             665 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 370644tic ultra-conserved element locus
            uce-248, sequence.
ACCESSION   KCPA01003362
VERSION     KCPA01003362.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 665)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 665)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..665
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="370644tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>665
                     /note="ultra-conserved element locus uce-248"
BASE COUNT          217 a          113 c          104 g          231 t
ORIGIN      
        1 gttttccaaa ccaattgtaa ataagcttct gtatattgaa acgtgtgcag accagggaac
       61 tctcctcctt ggttttctaa attggttttt agagcaatct gtctgttgcc attttatcta
      121 tttaaacaaa cacgataaca gaaaaatgca actatggact gcaatgttat gaaacatgaa
      181 ctgttagagt taacacaact gttaaatctt actaatgatt ctatcaccag taaaatacat
      241 tagcaccaat aattttatta aagtaggtca ttcatctaga ataaaaaggt agaagaatgt
      301 gaattaaatg ccaagcgtgc taactcccct gtacttgtta acattgaatg tgatgccctg
      361 taggccttcc tcagtatcgt taggaataga ttacctgtca ggaatatgta tggcatattc
      421 aaataagcac tgcgcatatt tttaaaactg atatgatatg aatccatgta gaccaatttt
      481 aatagttcaa aatgagtcat aattcttgtt aacaatacag ttatttttaa aatttgcagc
      541 aatagtggtc cttttttatt ttccttattg aaattaaatg atatgcctta ggtgagtcat
      601 tcatcactgt taaaggaact cgccttcttc cctaccatag ttttattttt ctacatgtaa
      661 gttgc
//
LOCUS       KCPA01003363             630 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 370754tic ultra-conserved element locus
            uce-615, sequence.
ACCESSION   KCPA01003363
VERSION     KCPA01003363.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 630)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 630)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..630
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="370754tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>630
                     /note="ultra-conserved element locus uce-615"
BASE COUNT          219 a          107 c          109 g          195 t
ORIGIN      
        1 aaaaaatcaa cagcacacat acgaggggtt cagacttaga atctccatat cttcacaaat
       61 gtgatgagat caagtaactt ttcttttaga aataacacaa gtaaaattca agtataatga
      121 aagcacatca agaaacaaac tgtacaattt ctgaactgca ctgtttattt tgctgcttga
      181 aacctaagtg acagtatgcc actataatta tggggtttct tctaaacctt tactacactg
      241 caggtacaga aatatatgga cacatttttg gagaattgac attttgcaaa atgcagcaaa
      301 catttcaatt tatacatgag aaaaggaagt gttcaaaagg gtatgcattt caagttattg
      361 caggttattt ctgtgagaga atttctgcag gtaaaacatg tttaaattta accaacagta
      421 acgtgtcagt atatttaaaa tcatgactct ctctggtcat taattgcccc ttgacaaatt
      481 actaggatgt tgtatgttta gggcaagatg tcaatacagc ataaatcccg tggcattttg
      541 gttttcttct ggagattaaa gctgtttttt tcttgggata aatgcagcag caaaacacaa
      601 accagctgat caaaaaagca cttctgccat
//
LOCUS       KCPA01003364             624 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 370862tic ultra-conserved element locus
            uce-6314, sequence.
ACCESSION   KCPA01003364
VERSION     KCPA01003364.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 624)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 624)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="370862tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>624
                     /note="ultra-conserved element locus uce-6314"
BASE COUNT          185 a          132 c          131 g          176 t
ORIGIN      
        1 aagccttcat cacctgcaga aatccctggc ccagactaca gatgccagtg cagttgcttc
       61 agttttgttt cactgccaaa gtataaattc aaaggaggat gggatgtgct ggcagcaatg
      121 taacacacca agcatctcca ctgagcacag aatctctccc aacccgctct aaatctgtct
      181 gctttcaaac tgaaagttaa gagttaatgc agcaccttcg ggttattaaa tggaacatgc
      241 agaacattac attattatgc tgcacatggc taaggaattt tagtattcac aggattatgg
      301 taattaagtc ttccttcact ttgggtgatg tgacacttgc ttgactataa tgtcactcca
      361 cttaaagtct gtgtaaacaa cattatctta gtcactctgc attacatttc caactgtgag
      421 caaaattaca aggtcaaagt ggacaagaat gtaggtaatc ccaaggaaac atcatgtaaa
      481 tgactcgctc aaggttcaag ctgggttttc aagggtggta aaaggcttat gtactacact
      541 ggtattttag tcctggtttg cagaaggcac cagtggcaaa ctgcagtgtg tagggacatt
      601 tacctgctca ggactctgcg taag
//
LOCUS       KCPA01003365             768 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 370971tic ultra-conserved element locus
            uce-7748, sequence.
ACCESSION   KCPA01003365
VERSION     KCPA01003365.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 768)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 768)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..768
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="370971tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>768
                     /note="ultra-conserved element locus uce-7748"
BASE COUNT          229 a          147 c          160 g          232 t
ORIGIN      
        1 aaataatcct gcccagaaga tggtatcgta ttcatgcaca gcagggtgtg caaatgccta
       61 taaatcataa cgtagaatct gaaatatcta ttaaaaaaaa tctgtgcaaa tttaaccatg
      121 accctttgcc agacaatagg ccttcatatg ctttgcagct tagcagacac caaggaattt
      181 tgtttggaag tgatagctac tgtctatgta atatttagga cctattcatg gagcatctgg
      241 cagaaaataa aagggtttcc tcctctaaca tatgctaaag aaggatgtgg tcctgtgcct
      301 gctcctcctc ttctgacttt ttgcaaatag cacaacataa gagacagttg tttctggctg
      361 ccctgctgcc tgtcatggct gtcaagtgaa atcccatgaa ttattgctct tccagatgta
      421 agagatttcc aggctgcctt aaactgcctg tggtttgtgg tagtggagag gagagaaacg
      481 agattaaact tcatctcatc agtgcaatct gaaaagatca cacagaggac taataatcac
      541 agctttttca ttccagagcc agacccgaga gctctgtgtt tttgtttcag ggctatgtca
      601 tattaagctt gttggaagac attgattaag gtcaaacaat gtttgaagat caaaattttt
      661 aactctgtgt tgctgcatac attttgcatt cttcggaaag tgtcaagcat tactttagct
      721 agctgaaaca gaagagactg tgaaaggagt tctctaattc tgagatgt
//
LOCUS       KCPA01003366             555 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 371080tic ultra-conserved element locus
            uce-4640, sequence.
ACCESSION   KCPA01003366
VERSION     KCPA01003366.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 555)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 555)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="371080tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>555
                     /note="ultra-conserved element locus uce-4640"
BASE COUNT          169 a           95 c          130 g          161 t
ORIGIN      
        1 aaaggatttg ctgcaagcct taggagaagt gcgctcagtg gcgatggatg ttttgaaaag
       61 cttggctgat ttcttggcat tcaggccaga agcccctgcc ctcgcacagg caagggcaga
      121 atttgggagc ctctggagtt gaagaaaagg tacagagaac atcctgatga ggtaataatt
      181 taattgtcta actccttctg tgctcgagaa tatcagacag atggggagga taaaacaagg
      241 agctcaataa ttaattttca tgttcctcac tagtgggacc tctttaatcc ctgttcctgt
      301 gattatagag aaaggttgga ttctgaagtt tcactcatta gctacgtgtt gtatgaaaat
      361 acctgtattt tcaaaaggaa tagtgacaaa aaaatttctg ctattagaaa tatcttggtg
      421 tcagggactt ttgtgaaaga actctgattc cctcagataa ataatgaaac agatggttgt
      481 tggggggtta aaggtcaaac cttccctgtt gactaaaaca caaggttgac ttaaaagatt
      541 tcccgaagtt attca
//
LOCUS       KCPA01003367             735 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 371191tic ultra-conserved element locus
            uce-7913, sequence.
ACCESSION   KCPA01003367
VERSION     KCPA01003367.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 735)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 735)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..735
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="371191tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>735
                     /note="ultra-conserved element locus uce-7913"
BASE COUNT          203 a          174 c          151 g          207 t
ORIGIN      
        1 gaaaggctgc acattaaaca gtttgtccga aagccatgtg catagcaaac ttttacacca
       61 gcttctatat aactatttgt tttaactctg cagctggaat gtttccagca taaggctttt
      121 agagtgactc cagcaataac agaagccttt ggatttttct tgctttgttt aaatccacta
      181 gccatactca aaaataatat ttcttcatgt tttattttta tacggtggct agcaggcacc
      241 ttagtaacca gccagagatc aatttcaacc accatcaatc cctaaactac agtaccagga
      301 cggctggcta aagaaaggaa actgattggc tgtagtctga aacttgccta gtacaaggtg
      361 tctggctgac tttgtcctaa ataaggctaa cattagtgaa ctaagagaac agcatttggt
      421 tgcagtcttg cactcaggaa catccttcgc caatgcgttg gcaagatctc cctactttcc
      481 gatccagttt caccattttc atgatggcct cctcgcgccc gcggcccatg tggtcgaacg
      541 tgcagtcgtg ctgttcgggc aggcggtgca acatgcagaa cacgtaacct gccagaggga
      601 gacggttagg gacttcgtac agaggtgcca tctcacccga actgcaagtg aaggacccct
      661 actggaactt tacccagttc tcaaaaatta atcaagcttt tacttatttt cttacaggga
      721 tcgaatattt gatca
//
LOCUS       KCPA01003368             517 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 371300tic ultra-conserved element locus
            uce-4827, sequence.
ACCESSION   KCPA01003368
VERSION     KCPA01003368.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 517)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 517)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="371300tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>517
                     /note="ultra-conserved element locus uce-4827"
BASE COUNT          179 a           86 c          103 g          149 t
ORIGIN      
        1 aaaaatggct tctctgttta aataagggtc caatgcagaa tgagaatgaa tgttgtcata
       61 tgaagtgcat ttcaaatgta ataaagcaga aaggagttcc tggcccctgt gtcagttgta
      121 agagggtgca taccgtgatc actatagctc agtggctgca aagcagaaaa tgaagattgt
      181 aaaaacgtca cataaagaaa aaatgcacag tggattcgtt ttgcgatgct cataattcag
      241 taatgccttt aagtagctag aagaaatata ataaatgttt ttccacaaca ttgatcatac
      301 tgtatcagag gaaatattag tgtgcaggga gccatgatta tgctggtagt atgcagaaaa
      361 ctcctagaag atgggaccct ttataggctg aacttttatt ggctgccgtt atttaccttt
      421 aagaatacgc ctaatacact gtcctatagc taaatatttt tgtgaaaact caaactagca
      481 actgtcagta aatcaaaaaa cctgctacca ctttata
//
LOCUS       KCPA01003369             879 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 371412tic ultra-conserved element locus
            uce-1094, sequence.
ACCESSION   KCPA01003369
VERSION     KCPA01003369.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 879)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 879)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..879
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="371412tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>879
                     /note="ultra-conserved element locus uce-1094"
BASE COUNT          270 a          142 c          161 g          306 t
ORIGIN      
        1 tattttaata atatttacac ttcacagaac taaagcaaga aaaattttac atcaccttgt
       61 gtgcctcata tatcgtggac aagttatcca tcaaaaacaa tggttgcaaa gtaggttgca
      121 aacaaatttt gcctaaggca tgaaccataa attaaagtaa taatcgtccc cgtaagagac
      181 aacttttttc cactgctctt taaaaaagaa agtaggtcag agaaatttag gatattttag
      241 agtatgtaca gtattgtatt gtttgccagc acctaattta caattacaga gctgcatgaa
      301 tattgaaatg attcagcttc ccattataaa tgtatgtggc agtttggttg ttgatcagtt
      361 tatgaagtta atgcaaatga aactgtcttc ctgtcagcat ttgaaatata taatgcagtc
      421 atgttgtata ttcagggaca ggccattgac agtcaattaa caagtttgat tggtatgtca
      481 actcattctt ttgaattgtt aatagtatgt taatagcatt catttctttg tgcagtccca
      541 tttgcagctt cacagttaca gctatttttt atgattctga gtaacctaaa atagtgcctt
      601 aataatagat tattaaacac ctgtctggtg tagcttaggg aggtttttct agactgggag
      661 tttgcagtgg atccctttga tattcaaatc aacaaatgat agccttttta ttcaaaacgt
      721 aagttctttt gatggttagc ttgttaagaa atattcagct ccagtctgac ctgatctggt
      781 ttcccatgga aaagatctga tgctgtttga aggttcataa atggaatgcc aatgacaatt
      841 tgttgttgac gttttgctgc ctcagccttc agatgctgc
//
LOCUS       KCPA01003370             655 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 371517tic ultra-conserved element locus
            uce-6383, sequence.
ACCESSION   KCPA01003370
VERSION     KCPA01003370.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 655)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 655)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..655
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="371517tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>655
                     /note="ultra-conserved element locus uce-6383"
BASE COUNT          158 a          141 c          160 g          196 t
ORIGIN      
        1 ttctcttagt ttgcagctat gtgaaagaat taccaactat ctccagagct attttaaata
       61 cctatgtgat ttgtagggat gtctatgcca tcctttttac accccaggag agagcttaca
      121 accactctga ccccttgccc atcctctccc actgatgttg tgcttccagt ctgccagtga
      181 gagatgattt aggtggttaa ggttgtggat atagcaggga attgtctgtc tattgttgaa
      241 cttagagaaa ttaaaagaag acctttcgac ctttgatcag gtcttgacaa gttcctgctt
      301 tttgcccgaa ggatggacat ccgtcggatc agctttgaca cagatgacct gtcagatgat
      361 gtcatccccc tcgctgatgt tcgcagtgct gtggctctag attgggactc aaaggatgac
      421 tatgtctact ggacagatgt tagcactgac tcaatcagcc gagcaaaatg ggatggatca
      481 aaccaggagg tacagtgttc actgtcatcc cgccaggagt ccttgagcat cagatttgtg
      541 ggatgcattg gcagctcatg gtggatcttt tgttcactgg gcaaactaat gagatctgga
      601 cgcttccaat tgggtagaac cttgaatggg gctgtggtca attcctttgt tgtag
//
LOCUS       KCPA01003371             755 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 371626tic ultra-conserved element locus
            uce-4426, sequence.
ACCESSION   KCPA01003371
VERSION     KCPA01003371.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 755)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 755)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..755
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="371626tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>755
                     /note="ultra-conserved element locus uce-4426"
BASE COUNT          251 a          132 c          173 g          199 t
ORIGIN      
        1 cagaagtgct gccacgttca cagcttttca agtattttta aatcacttac aaaagcagga
       61 ttaaatgatc aggaattcca tttaatagga caaataaaga aataacaatc tactccatca
      121 gccccgtgaa aagcaggttt gatttaagaa aaaaataaat taagtataaa agagggagag
      181 aaaaaaggaa agggaggtgg ggataatgtg tgtttactca agcaaagaaa aaaatattta
      241 agtgatgtag gggagaagat tgcggtaact agtgaagaat aacatcgtct gctttgctgt
      301 caaatcacac aagaatttca gtaatagatt ctcattctga cactcaattc aattcgaagg
      361 tgatcccgct ttatcccaac acatcaaata ttaaacactc gtattagcca gggtgccgtc
      421 gcctttcccg gcttagacgc ggcaggaagc ccccctactt tctctcactc gctataatat
      481 tctcaatgtt atctaaacat gccttcatac actggggttc cttatcaatc ccatttgggg
      541 agggagtgta cttaaaatgg tattagtttg gggggctttt attattatta tttccaaagc
      601 ttttcaattt tgtgtggaaa aagcttagaa aaaagaggtg gagggagggg aggcggcgag
      661 agagggagcg cgggagcgag agaaagtata aagaagggaa aagcagccag cagctcttgt
      721 ttgactgatg cctttcaaca agggcagtct agctt
//
LOCUS       KCPA01003372             571 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 371737tic ultra-conserved element locus
            uce-1271, sequence.
ACCESSION   KCPA01003372
VERSION     KCPA01003372.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 571)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 571)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..571
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="371737tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>571
                     /note="ultra-conserved element locus uce-1271"
BASE COUNT          159 a          132 c          134 g          146 t
ORIGIN      
        1 ctggagcgac ttttattgcc attgtttgtc tacaaatctc cccgtgccaa agttgtccaa
       61 ggctttgcta ttaatgactc atgagtacaa taatgctgcc agaacgtact taaaaaactg
      121 ttgctatttg tttccccagc actttgcgca aatgtctgtg gagtacccgg gctccccctt
      181 cactctcagc gctgaccttt gtgctctgga aacaattact cctggaaagc ctgtcaatat
      241 cattattttt acaagaaatc aatacgcttc acaaagttaa tgggggattc aggcagcgag
      301 cgtttacctt cttactgtca gtggtgcagc gggctgtgct ctggcacaga tgacagattc
      361 gcccagacac cgagcagaca gtaagcaatg gatgtaaagg aaaaatgggc tgcaagcagg
      421 cgtggaaaac gtcagcttct gcaggcatct atgctctaac gagccaaaga tgtcagcctc
      481 ttgtagtgtc cactctggag caagcaaaga atccggggag ctaatgaaag ggggattagg
      541 gaacggtttc cacttcacaa atagaaataa a
//
LOCUS       KCPA01003373             545 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 371847tic ultra-conserved element locus
            uce-7694, sequence.
ACCESSION   KCPA01003373
VERSION     KCPA01003373.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 545)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 545)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..545
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="371847tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>545
                     /note="ultra-conserved element locus uce-7694"
BASE COUNT          179 a          112 c          120 g          134 t
ORIGIN      
        1 ccaagacaga aagagaaatc aaaagagggg atgcttttta ttagcaagtc tcaagggaat
       61 taatttcatc agtgcagcag ggcatgagca aaccaccaat gaacttgaaa gtgcattata
      121 cccattaaaa ggcatgaatt ttctaaattg ctaatgggga tacattttac actcagagca
      181 ctaacctgaa cagctcttgt atggctggtt ccacgggaac tgcagagaga tggaaaacat
      241 ataaaaattt atcatctatt acaagcaccc ctcttctaca gaaaattacc agaaaggttg
      301 tgtaaaagca agggtcagag tgaatcgtgc aaagagattc tggagaatga aggtcaccct
      361 gagcaggggc cttgagtgat ttactgaagc aagagacata cctcgaacac ctttggagcg
      421 tgtgcgatgg cgcttctcgt ctgcatccac ctccatctgg gaatagatta gcaggcagtc
      481 aatgttctta tcctgcatgc acagactatc aatgtacaga ctgatacagt ctctcacacg
      541 attta
//
LOCUS       KCPA01003374             642 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 371957tic ultra-conserved element locus
            uce-2605, sequence.
ACCESSION   KCPA01003374
VERSION     KCPA01003374.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 642)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 642)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="371957tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>642
                     /note="ultra-conserved element locus uce-2605"
BASE COUNT          180 a          128 c          121 g          213 t
ORIGIN      
        1 acctatgcac acttgtatgt ataccaatct ctggccacta tttgtattta ctattataca
       61 aaatctccac tttgctccct cagcagtatt tatgctcttt aaaacccgaa ctctgttctg
      121 aagctgttcc ttgtttgttt tcaaaggctt cttgtaagat attggtgggt tgtgtgacag
      181 taaaaataag aaactacctt tccatttggg ttagaactga gatgaaatga ggaatggctg
      241 ccaccaagca gaaaattttc tcactttatg tgtgccagtt aattacgaca cttcagaggc
      301 gcttctgaaa ggataaggca agctgcataa atttagctgt aatccaggca ggcaaaacta
      361 atttgcaggg gatggcctta tctagctgct gcagctttct cagaaaatta accttggata
      421 tttgggccca attcagaaag tgtttgactc tttcctgctc tgcataagag aattttaaat
      481 tcaatacaat acctgacttt taagaggcac tgtgaatgct gtaggcagtt cagagttatt
      541 actgacaagc tatatttata catgtacata tatatgattg tccttcaggc ccattatcct
      601 gcctttttcc ctgtgcatca gagggtttat caccatatgt at
//
LOCUS       KCPA01003375             591 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 372062tic ultra-conserved element locus
            uce-7554, sequence.
ACCESSION   KCPA01003375
VERSION     KCPA01003375.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 591)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 591)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="372062tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>591
                     /note="ultra-conserved element locus uce-7554"
BASE COUNT          158 a          130 c          124 g          179 t
ORIGIN      
        1 ccttccacgt tgagatcttt cctgatagct atgtgtttgt tgttcccagg aagtagactt
       61 tagttttatc tcttggacaa cagcagccct tccccctctt tagcagtgaa aagaattctg
      121 gggttggagt atatctaatg caatggccat catctgagca cagatctatt tcatctcatt
      181 tgaattctgt gtggtttcaa aatgcaacag ggcctcagca tacaccgaaa attaattaaa
      241 atgaaatatg ctgtgctgtc ctttttcagc aagtgggatc ccaacgtttc agtgtcaaca
      301 tgcctcacaa gttcagcatt cacaattaca aagtgcccac cttctgtgac cactgtggtt
      361 cattgctctg gggtcttttg agacaaggtt tacaatgcaa aggtaaggca cttcagagca
      421 gtggcttgta ggcttatgta cggaaataaa tcatcatggt ttggtcctta ccctgtcggc
      481 agcaccagtc agtaacagat gcagaggtca gagcactcac tcctttattg ccaccaggat
      541 attagaagtt aacagatgag catgacaatt tacataccgt gttttcaggt t
//
LOCUS       KCPA01003376             463 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 372170tic ultra-conserved element locus
            uce-6855, sequence.
ACCESSION   KCPA01003376
VERSION     KCPA01003376.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 463)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 463)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="372170tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>463
                     /note="ultra-conserved element locus uce-6855"
BASE COUNT          156 a           67 c           99 g          141 t
ORIGIN      
        1 ttctatttca gggctttatc aggtaaagat aaaagaaaag tttcaggttc agaaaaaaaa
       61 tgtataggca tttgcatggc acagctttta tataagtgtg gtattatata acagatggaa
      121 gtttaatgga gtaaaacata gtttgtaaca ggttcattgt ttcatatgct ctggatcact
      181 aaattggcag gtagagatga aaggtgcatt aaaatggacg tcctgaaaat tatagaattc
      241 tctcaaagga atagtcttta attttgaatt atacagctaa ttttaatgaa ttggaagcca
      301 caatgcataa cctttctttc atgcagggag gaactgtgag ctgtgcaagg atttccatta
      361 cagacaagca ggtgcagatc tttcagccgt tgatgtttgc aaaccctgtg actgtaacgc
      421 aacaggcacc aaaaataaga gccttctgtg tgataatgta agt
//
LOCUS       KCPA01003377             434 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 372275tic ultra-conserved element locus
            uce-6619, sequence.
ACCESSION   KCPA01003377
VERSION     KCPA01003377.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 434)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 434)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="372275tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>434
                     /note="ultra-conserved element locus uce-6619"
BASE COUNT          152 a           79 c           77 g          126 t
ORIGIN      
        1 ggcacgacac cacgagctgc ctctgtctag aatacgtttc cttcatttaa gaaagtgcag
       61 taattcatca gtgatttaac ctatagacat ttgaaggttg gagagcacct cagaggggct
      121 gttgaccttc agcaaccgaa agaattgaag ctccagcctt agtcaatata tatttatctt
      181 tctgttggga ctattacaac tgttcaagta atgctgacct tgaaacttct gcacacgatg
      241 caccagaata atgatccctg aaggaagagt ataaaaatac ctaaatagga tatctaaatc
      301 caaaatgcac ataaagataa aaggaagcat ttcaaaatgt gaagtcgctt aagatgtggt
      361 aatattattg agggtcctat taattataat ttgaataaca ttgctaaata ccataattac
      421 ccatttctaa atat
//
LOCUS       KCPA01003378             547 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 372383tic ultra-conserved element locus
            uce-2383, sequence.
ACCESSION   KCPA01003378
VERSION     KCPA01003378.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 547)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 547)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="372383tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>547
                     /note="ultra-conserved element locus uce-2383"
BASE COUNT          164 a          106 c          100 g          177 t
ORIGIN      
        1 ttcagcttca gactgaccaa attctgacca aataattttc ttacagaaat atctgctgct
       61 ttcattaatt ttgggtacac tctctgcttt tcagcagtca tcctacaaaa ggtgggttat
      121 ttaagaaaca attaggtgcg tatacaaaac aatttgcagg cagtcttact ctttcagctt
      181 cctaagtgaa gtgcctttca aggctgattt ataacactgt cgtcttcaga aggcaaaata
      241 attaatagga gcacggactt ctaatttcag tgacttccag agaaagtgga tttcgtttga
      301 tttatgatgg ccggtgactt tgcattttat cagttcattc actcattatt tatgctgatg
      361 accaatttca atgggtcgct atcatctaac tcgctactaa tcaaagagaa ttagggttca
      421 ctgcattatt tagaagccac taatttatct tcagagcaag tatcaagaat agtttggggc
      481 cttctacact aagaagaggc acagctggca aagtcacagc atttgcctag tattacaaat
      541 gaatgtc
//
LOCUS       KCPA01003379             676 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 372496tic ultra-conserved element locus
            uce-5120, sequence.
ACCESSION   KCPA01003379
VERSION     KCPA01003379.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 676)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 676)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..676
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="372496tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>676
                     /note="ultra-conserved element locus uce-5120"
BASE COUNT          183 a          144 c          151 g          198 t
ORIGIN      
        1 ctgggatttc actaccttac ttttcgtttg gcttcacgct gaaaaaaggg atttcttata
       61 tttgctctcc gcgcttttgg ttctaatcca gtgttggtct agggggaaca accgttcagc
      121 ctggctgaaa aaaaagcatc cgttgaaaag tctcaaagaa atataccacg tgaggaaaaa
      181 aaactgggag aagatcggaa tataatcgtt ttttctatga taaaactggt gcccctcttc
      241 aggagaactg atctcaattt attattatgc aaccacaagg atctcttctt tctcagggtg
      301 tataagctgc tggattgctt ttcgcccaaa tcaatgtggt ttctttggaa cattttcagc
      361 aaaggatcgc atatgctgca gtgtctttgt ggcaagagtc ttaagaaaaa caagaaccca
      421 actggtaagc aatccattgc aatgcgttgt ttttctttaa tgctgccctg tctgttgctc
      481 gccgaggtag atctgcagtc ctgctgaggg gagtcgaggc cagcacggac acatacgtgt
      541 gtgaataagc aaggagcggt ttgtattagc ttcagcccac cgaaaagggg taaaatcaaa
      601 ggtgatcttc acccagccgg catctcctag ttcctatgtg ctatttccaa ggaggaaact
      661 tttatatcac taccct
//
LOCUS       KCPA01003380             542 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 372605tic ultra-conserved element locus
            uce-7997, sequence.
ACCESSION   KCPA01003380
VERSION     KCPA01003380.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 542)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 542)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="372605tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>542
                     /note="ultra-conserved element locus uce-7997"
BASE COUNT          151 a          134 c          117 g          140 t
ORIGIN      
        1 gaccaggccg agagtctaca attctccaac aaacagctcc tccacccagg attctatgga
       61 ggtgggccac agtcaccact ccatgacatc cctgtcttcc tcaactactt cttcctctac
      121 atcttcctcc tctactggta accaaggcaa tcaggcctat cagaaccgcc cagtggctgc
      181 taataccttg gactttggac agaacggagc tatggacatg aatttaacag tctactctaa
      241 tccgcgccaa gaaactggca tagctggaca tcccacgtac cagttttctg ctaatacagg
      301 tcctgctcat tacatgactg aaggacacct tgccatgagg caaggcattg atagagaaga
      361 gtctcccatg acaggagttt gtgttcagca aagtcctgtg gctagctcgt gactaaactg
      421 tttgtttctt gtgtgttttt atagaagtgg tgaaagtgca aagctgcttg aatcagaagg
      481 agataaaacc gctacaggag ggcaaagttg actatttttt taaacttgaa aagattgcaa
      541 ag
//
LOCUS       KCPA01003381             543 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 372713tic ultra-conserved element locus
            uce-1102, sequence.
ACCESSION   KCPA01003381
VERSION     KCPA01003381.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 543)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 543)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="372713tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>543
                     /note="ultra-conserved element locus uce-1102"
BASE COUNT          182 a          116 c          101 g          144 t
ORIGIN      
        1 aatgaaagct ctctattaat agtgaaggaa gaatttaact caaagctttt ctgtaggact
       61 tctcaacttc ccgctctact tatagcagac tgttgtgata cattgtgact tcacacagtg
      121 ggtattaagt gagttaattc aaaggagctg aaacctcatt gatcctaatt gaaagcaata
      181 cacccaacca aatagttttc taccccatct gctctggcct gccaccagct attcaataca
      241 agagaattaa tagtttcaga tattctaaca gacccaataa aagcactcat ttaagcagga
      301 ctgcattaac aaagtgaaaa accaagggca aaatgggttc aaatggagca ttttactcct
      361 agttggcttt aacaaagctg aataatgctt attctgactt tttatgtgca agacttgata
      421 aactgaatga gaaggcactc aatgatcagt caacgagcat tgatgaatgg tcattaggac
      481 ccccccaatc tcagggaagg ccattccaca aagtggcaca ccagcttgaa agggcggact
      541 cac
//
LOCUS       KCPA01003382             477 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 372823tic ultra-conserved element locus
            uce-5557, sequence.
ACCESSION   KCPA01003382
VERSION     KCPA01003382.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 477)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 477)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="372823tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>477
                     /note="ultra-conserved element locus uce-5557"
BASE COUNT          113 a          126 c          112 g          126 t
ORIGIN      
        1 gggcgcttac aaatattaat tgaccaagtt gcttcccctc cccgaattac ctgtttagct
       61 tctttctttc atggttcaaa ttggcacaag acccagagtc aggagagcac ggccacggga
      121 ggattttaat ttattgacgg ctcttgccct actgtacagt cagcgccgct atttgagcgt
      181 aatggatgga acagatgttt gacaccgcag cacctcttca taacttcact cttcaaaaac
      241 agttttacaa gtgctcgctc gcgttggttc ccattcagca caggaaactg aggtcatgct
      301 gaaacatgag gcccgggcag gagcttgaac tcatgtgcac tgcagctggg cccgcgccct
      361 ccgagcggcg atccgcggag ccgccgtcct ccaagggatc agactgtgga cactgtaacg
      421 tctgcacgaa aatttgagcc caattttgtt aatcatcttt ttaataattt cttcggg
//
LOCUS       KCPA01003383             392 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 372931tic ultra-conserved element locus
            uce-4452, sequence.
ACCESSION   KCPA01003383
VERSION     KCPA01003383.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 392)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 392)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="372931tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>392
                     /note="ultra-conserved element locus uce-4452"
BASE COUNT          115 a           75 c           82 g          120 t
ORIGIN      
        1 aagttattac ctgataaatc ctgggatttc ccagatactc tagcacgttt tgctcggtga
       61 ccaaagtttt cagtagctga agtagaggca cccaattagt tcagtcatta aaaataccaa
      121 catactcttg aaacataaaa tctccttaac aatttacctc catactgctc tttgtaggac
      181 aagctgttct tttaggtaga agagtttttc tgcggagttg gtatgggctg ttttgtgcac
      241 caggacctga ttcttctgca accatatctg caggtacatc atcatctgtt ggtaattgga
      301 attgtagttt tactttatac caggaaaatg caccagaaat ttacatagtc agaagggcgg
      361 ggaggaagtg ctagagaaca gagaacttct ag
//
LOCUS       KCPA01003384             613 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 373038tic ultra-conserved element locus
            uce-2577, sequence.
ACCESSION   KCPA01003384
VERSION     KCPA01003384.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 613)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 613)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..613
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="373038tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>613
                     /note="ultra-conserved element locus uce-2577"
BASE COUNT          178 a          130 c          121 g          184 t
ORIGIN      
        1 tatttctcct cagcaagagt aaaacttgag cttggccagg tgtttttact tcagaggctc
       61 caacggcaac aacaactcca gtgcttggaa gctaacaaat ttgttgtgtc acaattgata
      121 atcaactcta gtaaaagaat gtccaaatca attgagcttt agcaagggca aactgactgg
      181 acacagccag actcccagca aaagtaggcc aagcttgata aatttgccct tattatagct
      241 attgatgttt aaatttcttc agggatgttg ttacatgggt gcctagtggt gacagaagta
      301 cgatgacctc cttcgatcct taatctacac ctgttagttg gctccctagt tgcttgtgag
      361 tatactcaag cttaaaggtt aacaaaagaa aaacaggcca agtttacgcg actgcagcaa
      421 cggatcaatg cagagtaaat aaccttctct gtcttatttc cccaagcatt attgatccga
      481 gttctttgtt ctttgtcatg tttctgtctt ctaatcccag gggacgctaa acgatcggct
      541 catattggac atgttaactg gcacattatg acagctacca ttttgtcact caatgtggtg
      601 ctatatataa aga
//
LOCUS       KCPA01003385             675 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 373149tic ultra-conserved element locus
            uce-4195, sequence.
ACCESSION   KCPA01003385
VERSION     KCPA01003385.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 675)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 675)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..675
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="373149tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>675
                     /note="ultra-conserved element locus uce-4195"
BASE COUNT          179 a          132 c          125 g          239 t
ORIGIN      
        1 cttcccttta ttaagagcaa agcttgcttg tgaaacccaa agggttaatc attttctgct
       61 ttggaccagt aggtgatttc catcattttc agcatttgat tatggaacat gtatagagtt
      121 gttatacctc tctgtaattc attctgctgc caacttcatt cccttttctc tgcctgcatt
      181 ttaattgaaa caacatttgt atttttgagc caggatctgt cagaagtccc tgtggctagt
      241 ctgtggtaca agtagcagca gacgtggctt acccatatgg tgtggtgctt cttgtaaaat
      301 ccatatggcc ttgttgaagg gaatcccagc ggggatgtga agggtgttaa tacccttcag
      361 gccaggcctt tccctcctgg ggcttctatg gcattgtctt tgcaatctgc caaagcacaa
      421 acctaattcc tttttaataa tcaattattt cagtccagga acgttttttt gtaatcatat
      481 attccttgaa cttattattt gtttttggcc aaaatgtctc ttcaaaatcc cctaactttt
      541 gcttgtattt tcaggaagtg ctgaacagtg ttccaaagtt ctgttttcct tttgacattg
      601 aaaggtacgt gctacagtta tcatttaaaa aatattgcat agaaaacata attacaagaa
      661 aggatttaaa gaaaa
//
LOCUS       KCPA01003386             290 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 373253tic ultra-conserved element locus
            uce-3384, sequence.
ACCESSION   KCPA01003386
VERSION     KCPA01003386.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 290)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 290)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..290
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="373253tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>290
                     /note="ultra-conserved element locus uce-3384"
BASE COUNT           84 a           54 c           60 g           92 t
ORIGIN      
        1 gaagaagaaa atgactggta tagtactttc tcctctcagt tccttctcca ctaatgccct
       61 tacacctttc tttttctttt tgtagcatcc taaacagaag gatattgaag ggagctgatt
      121 ctgctttgat ccttatgctt gttgtcaaag cgcttgggat tgaagagact gttggctaca
      181 attgactgtg acaattagga gatgatcaga gccctagagt ggagcactta aagggtaatt
      241 tacatgtcag tttgtcgaat aaaaaaaaga tattcagcta agacccctta
//
LOCUS       KCPA01003387             535 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 373365tic ultra-conserved element locus
            uce-1036, sequence.
ACCESSION   KCPA01003387
VERSION     KCPA01003387.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 535)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 535)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="373365tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>535
                     /note="ultra-conserved element locus uce-1036"
BASE COUNT          141 a          125 c           95 g          174 t
ORIGIN      
        1 atctgtttaa atatttgttt ggtctgtctc tggatttttc attaaaaata tgtggttaac
       61 agcagccaac ctgatttgca tgtgtgtgtg tgtctgattt gttcaccgct atgcctcctg
      121 tgtcctacat cttaatcaca tccaggcacc cgccccatta cattaccaga agggaagtga
      181 tggacatccc ttgactctct tcatgaccct ctgataatcc tgtttcacac acaggctccc
      241 tgctgtatga aacacaaaag ctgccactgt agttctttac ttccagtcga tattctgaca
      301 gacttgatct agcaaattag tatgccgtgg taggggcacg acaaaagacc cttttgacac
      361 actctgaatc gatacaaagg ccaacagaga gccatttcac cgtagttctg ttatttttcc
      421 ccttttgatg acccttcttc ttcttctttt ttttagcttg tatgaccttg tcagatttaa
      481 aaacataatg ttagaaaagt catccttgga caggagaaga aaaatctaaa catgc
//
LOCUS       KCPA01003388             596 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 373477tic ultra-conserved element locus
            uce-5847, sequence.
ACCESSION   KCPA01003388
VERSION     KCPA01003388.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 596)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 596)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..596
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="373477tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>596
                     /note="ultra-conserved element locus uce-5847"
BASE COUNT          189 a           99 c          103 g          205 t
ORIGIN      
        1 agttgctatt acagcaaagc taaaggactc gttttcaaac atatgctgag atttaagtag
       61 aagcataatt gattgggtac tagctctcta tagtaggtaa ataaaaataa aaagacttgg
      121 cacttttaaa aggtaacttt accaaagaac aaagagccag taaccaataa ttctgatttg
      181 tctcagcatt gcgtcttctg tactctttat ttttgccgga ccagtttgcg gttaagagaa
      241 tgtgcctgta catttgcatt taggttttat aattttaatt gatgtatgga cacaaaagca
      301 tgaaggaaga cttggatcca agcagtgcca cactttacat catcactaca agtgttaagt
      361 gtaaagaaaa ccaattttga aactatgaaa ttcctgattc aagttatttg tacttcacat
      421 attagataat tcactgctac taaagctttt tattacaatt gcatatgttt taaattgaat
      481 gataaattaa gttgtcttcc aaaactgtgt acttctctgg tcagctgtat atgatcagtt
      541 atctacctca aagtttattt ccttttgtat tgggacaggt tgctggccct ccctgt
//
LOCUS       KCPA01003389             521 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 373588tic ultra-conserved element locus
            uce-7578, sequence.
ACCESSION   KCPA01003389
VERSION     KCPA01003389.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 521)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 521)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..521
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="373588tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>521
                     /note="ultra-conserved element locus uce-7578"
BASE COUNT          144 a          102 c          125 g          150 t
ORIGIN      
        1 acaaatacgc ttctgtatta acctagaaag taagttgtgc gatgaaaacc catctgaagc
       61 aaatctggta ttttcttttc agaatgcgcg aaatatttca aggaagtcag acatgatctg
      121 caaaaaagta acaggagtcc cttacctgcc gagagatgga gctgcttgta ggatctggca
      181 ccgcagaaat aaggttggca gtgctctttc tatgaacact attcatacca ggcattttag
      241 tgattttaca ggctttgcta ctagaactag agtttttacg tttttttcct tctgatttgt
      301 caaaagaaag gggtagagaa gacactgcat tatgtgctcc cagggagtgg tccccggagt
      361 ggtgcacgag agaagataca gacagactag aagagtcaat gctgctcact accatgctca
      421 tgtgtttcac tgagtctgtt gaactacttg acaatgaagt ccgtcctgag ggctccgatt
      481 tggcactgag tgggcttgtt ccgttattgg tattgtgcac a
//
LOCUS       KCPA01003390             772 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 373700tic ultra-conserved element locus
            uce-6472, sequence.
ACCESSION   KCPA01003390
VERSION     KCPA01003390.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 772)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 772)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..772
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="373700tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>772
                     /note="ultra-conserved element locus uce-6472"
BASE COUNT          248 a          125 c          144 g          255 t
ORIGIN      
        1 aagagcacta aggaagatga tggattaaag cagatgcaga ctgtttgtgg ttatataaga
       61 ctattaggta ccctgcttgt tctggctttt gtaatttgtc catgtcctac tttatataac
      121 tcaatccatt gtgagcaaaa acatgaaata ccagaatagt tcatatttca ttttgtcagc
      181 aaattagaag aaaacacaat agacatcata tttgctgagt atagaagtga gtattttttg
      241 atatcaaagg agtctgaaaa gaacagaagg ttaagaagat ttctttttac aatgagcaga
      301 tgtgcttgtt actgttgatg gacaggctta tccatttaca tcaattaata tcaacagcaa
      361 gcacatcaat atggaagctt gtcctgacgc cttgattttt tcccatctga caggtaatag
      421 tagggctggg aaaatgtcac aacaatttag tcatgcttca ctggctttaa ctagttcaat
      481 gacaatggga atgcatcatg ctaagattcc ttatgattca taatggtact gcattagtcg
      541 gctattgcag aggatttaaa ctagtctttg tcaattaaag gtttaaggtc aaatcctctt
      601 ttttcattcg tgcattaagt aaaagcaagt taaaatattt atgaatggca ctgaaatgtg
      661 gaaactttct ttaggaacct gtcttttcat attgagtcat aaatgaaacc aacaatgttt
      721 gacaaagaaa cgctatttca tcacatggcg tggcttatct ctcctgttct ct
//
LOCUS       KCPA01003391             283 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 373801tic ultra-conserved element locus
            uce-6032, sequence.
ACCESSION   KCPA01003391
VERSION     KCPA01003391.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 283)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 283)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="373801tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>283
                     /note="ultra-conserved element locus uce-6032"
BASE COUNT           82 a           59 c           53 g           89 t
ORIGIN      
        1 ccccatcccc cttccctcca actttgctat ggctgtctaa atagcccagg agagataaat
       61 caaagactga actgtaacct tacacttata tacttgttaa gtgacttttt tacggtctgt
      121 tattgctaga aattggattg cttttaaact aatgttctct ggcgggcaaa agtgagtgaa
      181 atcgcaaagc ctggaggaac actaattact tgttttaatt agcagcaact ttcactagag
      241 tataatctcc ctacaggcca ctttttggta ggtgtggaaa ata
//
LOCUS       KCPA01003392             741 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 373909tic ultra-conserved element locus
            uce-6692, sequence.
ACCESSION   KCPA01003392
VERSION     KCPA01003392.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 741)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 741)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..741
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="373909tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>741
                     /note="ultra-conserved element locus uce-6692"
BASE COUNT          204 a          119 c          161 g          257 t
ORIGIN      
        1 tctgtgtaag attgtgaagg cattcataac aaggttgggt aaaacatttt ttttaatagc
       61 agatgtaacc attgcttaac tctctttgtt ctttgcaaag aaattgttta aaccacagtg
      121 tagcttatgt actggggcaa aatccgtgta gttttagatc atttgtgatg ggataggatg
      181 tgctctgtgt tctgcttgat cattgaaaat ccagaggacc agcaggagtg agtgttttag
      241 gtttgcacac atttgtggga tactgcattg tgggaatagt gctgagttcc ctgttatcat
      301 gcaagcaatt gctaactgta gacctctgac tttgtaattt gttctttatg gactagcctg
      361 cagccaataa gcaaaatcaa tagtctttgc tgaaaagtaa gcaagtgcca gtgtgttatg
      421 tgacaggtga agatacatgt gcttaccagg ggtcaggggg ccacatcaaa tttctctctg
      481 acttcttttc aaaaagctaa atccatttag ggagcattcg tcattggaaa atgttgcagt
      541 ggggaattag acaggctcct gctcttcttt tctcatttaa cgatgtttgt tttcaacagt
      601 ctgttcaata atgtcactga gaagaaatta tgtgagaaga ataaagtgct tatagtctat
      661 ttatttattc attcttttct gtagaataac actagctgtt gcattctcat gtttattaat
      721 gctattgtgg cagtccaaat a
//
LOCUS       KCPA01003393             716 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 374017tic ultra-conserved element locus
            uce-3987, sequence.
ACCESSION   KCPA01003393
VERSION     KCPA01003393.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 716)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 716)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="374017tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>716
                     /note="ultra-conserved element locus uce-3987"
BASE COUNT          207 a          189 c          146 g          174 t
ORIGIN      
        1 gttcaagtct cggcagcctg catgccgctg acagttccaa gaaaaaatga acctatttgc
       61 ccttttcttg gtctgaaatg ccaaaataga aaagcacaac tagagtcatt aaaaagaaag
      121 aaaataagca ctggcttatt acactagctt cccaagcaga atccaaattc ggtttttcag
      181 ccttcacaaa ggagcaaatt ctgcgtctac ggttggctgc agtgaaactg tacatcttga
      241 ctttttacag cttttccata ctggggccca cttcctgccc agttgaagaa aaaaatctgg
      301 cctgaagatg aaatgactgc ttaacattac actaaaacat ctggtaccat tttatacaca
      361 gacccatgtc tgagagcagg caattctagc ggtctcacca gcggcacagt gcatacccaa
      421 acctccccag ggtgacatca tcccatatat ggactctcag gcccagccct cccccttttc
      481 ctggtcctaa attcattgcc agatccccag tctgctgcaa atgtgccacg tcaagactgg
      541 aaatcacagc acttcagtgt gtttcagtga gtgctgcaga gtgtgagcga gagccgagca
      601 caacccgtga tgcaggaagg cagtttttcc ccgagcctaa aagaggattt aaaataaata
      661 aatagacgcg tccggagatc ctgctccgtc gccccagtgt tcagactacc tgttca
//
LOCUS       KCPA01003394             718 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 374123tic ultra-conserved element locus
            uce-4435, sequence.
ACCESSION   KCPA01003394
VERSION     KCPA01003394.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 718)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 718)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..718
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="374123tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>718
                     /note="ultra-conserved element locus uce-4435"
BASE COUNT          199 a          153 c          151 g          215 t
ORIGIN      
        1 aaaggtttgt actacaaata atacaaaaca tgtcttttgt ttttaagtga accatttagg
       61 aggcaaccat ttctgagatg aatttttaaa ggtgttctgc ccaaagtgag ccgtatccga
      121 agaatcccgc tggggctgtg gagtagagaa gagcctatag atcacagcct acagctttta
      181 tcaccagctt atcagaggaa ggtgtcacct ggcctgtgat ttctaaccac tgttctatat
      241 tctgctttaa tgtaaacctc ttaagcgttc cttgcagcca gttacactgt gtgttctcat
      301 caaggctact gttataaatg gcacgcatgc atattgatgg gaatgagtca aagacatttg
      361 taagtcacat ccttgcatcc caaatgaatc ctgcataaac accacaacct tttagaactg
      421 ctgacgacac tcgagtgagc agaagcgctc ttcgttcttt attggtttaa gcagggatgg
      481 tttaggagag aaaattaaac ttttatatca ctgtaacgta catcccaata tggtgaggta
      541 cagatgggag gtttctgtct ccataaattg gagtcgtgga acaaggaagg tcattggaag
      601 cctcctgctc tcctgagctg acaagcagca aaactttact ggcccctagc ttcctttgct
      661 tccttcttgg tacaaaactg tcctgactct tcctttctaa tgatgtagca atagtctg
//
LOCUS       KCPA01003395             660 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 374228tic ultra-conserved element locus
            uce-460, sequence.
ACCESSION   KCPA01003395
VERSION     KCPA01003395.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 660)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 660)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="374228tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>660
                     /note="ultra-conserved element locus uce-460"
BASE COUNT          218 a          119 c           92 g          231 t
ORIGIN      
        1 ttcaagacat tataaaaaca caacaaaaat cataaaaatt ccttttgtct caaacacata
       61 ccttagcagt aagggatgta tccctaaata tttcctcagg aaaaattaat gaagtaaatt
      121 aaaagttctt tcaagctgtt ccaaacaaac tcatttcaca gccttttatc atacttcctt
      181 gccgtttggg aaatttattt aagttattaa aaaattccct aaaattctca gctgaaaagt
      241 tggcttctgt tttttctaca aagctaactc acctgatttg tcagaacagc tcgaaaatga
      301 agtgctaact ggtgggtttt attgaaagga aaccaagtgg aacaacatat gtattttctt
      361 aggaaactaa aaagctcaca gtcctgtggt gttccttggg gtaaattctt tgttatgaat
      421 tacaacctgc ttactgatga gttgttaata aaaagtagac ctgctgggcc attatttttt
      481 tccacacagt atacccagtt tagctttttt ttacgttttc attaatacac tgagtgtgaa
      541 taaatctgtt tccaatttgt aattgttttc ccttcatctg gacattaatt tattgccaaa
      601 tctaacactc ttctattttt aatatccctc caaactgaag agttctttta aaaagaaaaa
//
LOCUS       KCPA01003396             548 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 374332tic ultra-conserved element locus
            uce-3099, sequence.
ACCESSION   KCPA01003396
VERSION     KCPA01003396.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 548)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 548)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..548
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="374332tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>548
                     /note="ultra-conserved element locus uce-3099"
BASE COUNT          134 a          115 c          139 g          160 t
ORIGIN      
        1 tcctaaataa agcttctgtc ttgctgatct gtgcccagaa catgtgtaaa caatgtgtcc
       61 caatgtgtta tctgtcagtc caagaatttc tatgtttgcc tcaggagagg tgaggagatg
      121 ctcagtttga ccttgctttc tttgcacgtg cctctaattg atcttgaaaa gaagggacag
      181 ttaaagaaga cattaaggtg aaatgaagcc ataactgtga ctggagactt ttattcaaaa
      241 ttccctgggc tgcgtataaa ttgtttattg attttggtat ggctggatgc tctggagtaa
      301 tcgcctgcag aaccactaga gagtgagcaa gagggctttg ccaggtctct gctgcttcct
      361 gcccgttcct cctgcctgtg ctggtggtct cctctttaac ctgtaaatga gcagggatga
      421 ctccctcctg cagcccagag cgggcctgct gttccagaaa tggccggtga aaggatatag
      481 caagggaaga gatggttttg gagcatgtat catacaagtg actgagactt aaactgccct
      541 ttggctct
//
LOCUS       KCPA01003397             719 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 374442tic ultra-conserved element locus
            uce-3573, sequence.
ACCESSION   KCPA01003397
VERSION     KCPA01003397.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 719)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 719)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..719
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="374442tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>719
                     /note="ultra-conserved element locus uce-3573"
BASE COUNT          247 a          107 c          123 g          242 t
ORIGIN      
        1 cccccaaaac aatctgaata atgaatcaaa tggtctcagg agtaattgga tctttttctg
       61 tgtaattagc aatttttctc cttgcattat aatttaaagt actgtggttg aattgagcag
      121 ctcatgtaat gagtcattag actgaggctt ttaaggaagt tatttctgaa ggtctgtgga
      181 ggctaaaata tgtctaaatt aaaagaatga caggctgcaa tcatggctgt aaaataaagg
      241 tgctcagtaa gcagtcctat tacaatcaga aagaaaaaga agcagatctc tgtcttgtgc
      301 atggaagcag aggaaatgat gaatacctta ggtaactcat tctgtgcaaa atcaatcttt
      361 cactgtcaat tttaaatgaa ctaatttgtt cacaaatctg ctcagtcagt ttggaagcat
      421 actcagttca tccatattag caaatccttt aatcttgact agtccactga gtaagaaatc
      481 tagaaatgtg ttaatatgac tggacatatg tagtaggata agaattgatt cttttaatta
      541 gtgtctattc aagttatagt tccttctttt actgaactat tgacccactg atatataaag
      601 agattactgt tatgactaaa ataccttcca aagttatatt taactctttc tttattggtg
      661 aatatgagat agaaaaataa tctttgagtt atccaaaaat aaacaatgta atctaattt
//
LOCUS       KCPA01003398             665 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 374552tic ultra-conserved element locus
            uce-6478, sequence.
ACCESSION   KCPA01003398
VERSION     KCPA01003398.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 665)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 665)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..665
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="374552tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>665
                     /note="ultra-conserved element locus uce-6478"
BASE COUNT          170 a          163 c          141 g          191 t
ORIGIN      
        1 tcaggttctt ttcccctttg cacaatgtat gcagggacaa gaatgtgtaa gtgccaccgc
       61 caccccattc agactttcgc tgaattggtg taattggatt ttgcacctca atttgcaaga
      121 tacagttccc ctgaaaacca acccgttttg gtaagcataa aaataaaatg aaataaaaat
      181 aataataaag acagggcagg cattcataag gtaccaggtc tccacagtct tcagctgcga
      241 gaccccagat ttcaatgtac cctgaaaagg gtgattaatt taaagtgagt ggagtctgtt
      301 gctttaagac aagctcataa atcgtgaaag atcaccactt cttttcaaaa ggctctccac
      361 ggtctgagtt tcccttctgg gtcagtaaag gcattgaagt tttaatggca tgccatggca
      421 gattacacga tacagctgtc ccggcaccgt gaaaattaag ttatgccccg tgtcagcaag
      481 gtttttttcc ccttttcttt ccctaccctc cccccttcat tctctctctt tctttctctt
      541 tccctgtccc cttcttcatt ctcctttttg ctgggaagtg cgcatccagg gaggaggtgg
      601 gagcccggca ggagctgctg ccaccccagc tattgagact gagtaaatgg agctgatggg
      661 tgaag
//
LOCUS       KCPA01003399             797 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 374654tic ultra-conserved element locus
            uce-2177, sequence.
ACCESSION   KCPA01003399
VERSION     KCPA01003399.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 797)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 797)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..797
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="374654tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>797
                     /note="ultra-conserved element locus uce-2177"
BASE COUNT          273 a          174 c          140 g          210 t
ORIGIN      
        1 gaagagcaaa tgtcttttag ggtttcaagc tcctgtataa gtttcttgtt ctgaacttct
       61 agcactgcaa cacgactctc cagacatttt atgtattctt tcttccgacg tcgacattct
      121 ttagcagctt ccctgcaaaa agcagaagta aaaagtgcaa acaaaaaagc catttgcatg
      181 ccattagaaa gctcagcaga gtatggagac tatgacagaa ttccaaattt tggaatatct
      241 cccaaatcag tctgaaaaca ctaagcaaaa ctgggttcca caagggcctc aagagtctct
      301 ttctcaagtt catatggcaa tctgtagaat tgcttcctct catgccttga ttaaagttca
      361 taataaagga ggtccaaatg aaagacagtt attctgcttt atgacaataa agatctttga
      421 gggccttgag ttcctcaatg agagtcttgt tttggttttc aagcacagcc acacgatttt
      481 caagacattt gacatattct ttcttctttc tgcgacattc tctggcagct tccctggaac
      541 caatacaagg caaatgacta caggaacagc cacaatatgg caaagactgg ataaatgcat
      601 tacctgcaat ccctctaaca accaccacaa caactgctgg attgcacaaa cagaacatca
      661 gataacagcc atagaatcca aaacacctgg aaccagcatc accaaataca aagatggaac
      721 caatacacag aataactgag aaaaacaggg agtaaatgat aatgtattga ctagaattgt
      781 actaaacatt aggatgg
//
LOCUS       KCPA01003400             498 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 374751tic ultra-conserved element locus
            uce-767, sequence.
ACCESSION   KCPA01003400
VERSION     KCPA01003400.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 498)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 498)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="374751tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>498
                     /note="ultra-conserved element locus uce-767"
BASE COUNT          169 a          100 c           82 g          147 t
ORIGIN      
        1 cacgcacaaa taaacgatgt tcactaattc tagctatata aatagtgtcg gcaagtgttt
       61 ccattgccag atatgctcag aagaatatta ttagtttgta ttaatagatg caggcctcaa
      121 aagacgaaat cagctattga taattgcaag aagtatacag cagctactgt atcgatcggc
      181 ttgtccctta ttcccctggt ataggagaga taagaagaca cactctttag tgcaatataa
      241 tttcttttga cctatctgct tgctacagac ttatgatgaa tagccagagt ggttaaagtc
      301 ctttatcacg aaagttaccc cttgatataa tattgattct ttataactag ctccaaacac
      361 aaaaatcaaa ctgtccactt gaccatcatc atcatcaata tcatcacaaa ggctctggaa
      421 taaagatcag cacaggactg aaaacgcttt ctataatctg cccacctaat ctttatttgc
      481 tgatgatgaa aagagaag
//
LOCUS       KCPA01003401             589 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 374862tic ultra-conserved element locus
            uce-3512, sequence.
ACCESSION   KCPA01003401
VERSION     KCPA01003401.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 589)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 589)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="374862tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>589
                     /note="ultra-conserved element locus uce-3512"
BASE COUNT          193 a          119 c           80 g          197 t
ORIGIN      
        1 cagtttccta gcactccttt gaagggaagc taatgcttga agtgcatata cctttaagta
       61 tttctatttg aaaaacacaa agcattgcaa gaatcaattc ccggatttag gaaagaatgc
      121 aacactgaga taatctcact tttcccatca tcttcctttc attcttctct actccctccc
      181 ctccccagac acaaggtgac atatccaagt acttgtcctt taacagattc ttcagaaagc
      241 aacagagcag aaagccctaa tatctattca tttgtaatct gtcattctta aagtattaag
      301 gacaattgac gtcacatgtc tcaggtaatt agaatagtca gtctttgctc cacattttta
      361 aactaagtgt ctcaaactct taatcagtac atttattgat gtctttcaac atatctgttt
      421 cttgtcaagt gtgttattaa aaaatcgtgc atactgaatt gtgcaggaga attatattaa
      481 aaccttctct attgcttttg taattaaata atatatatcg tggtattttc cacattcaga
      541 gtaatcaatc tcatggaaaa ctgctcaaaa gcaaattaat aaacataaa
//
LOCUS       KCPA01003402             723 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 374971tic ultra-conserved element locus
            uce-6614, sequence.
ACCESSION   KCPA01003402
VERSION     KCPA01003402.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 723)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 723)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..723
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="374971tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>723
                     /note="ultra-conserved element locus uce-6614"
BASE COUNT          224 a          136 c          149 g          214 t
ORIGIN      
        1 tgatcttgca cttgcctcct gtagagctgg caggcagcct aagatgtaca ccaaattctg
       61 ggaaggaagc aacaccattt ctgtatagta ccactgtgaa agctagtctg ttggaccact
      121 tttatttcct cttttgttca aaaatctgag agacacgaga tacgacagga ggagatgaaa
      181 accctcagtt ttcagtttct ctttcctcct tgcatctaat attccttttc tagtcttgtt
      241 ctggtatcgg ctatttgaaa tagttatata taatttaaca ttatacaaaa gtattgtcat
      301 atcaaacata gtgaaacaga ttccaaaaac accatctggt atttgggaat gcactgtgag
      361 ttgggaacgt gagaagagat attctttgcc actttgcttg ggacccagcc attagcagtg
      421 taattgccaa gaaaaggtga caggcttcag gcttaatgca agtggttggg tttttttctc
      481 tctctctctc ccagtctgtt aactctatga gtcctaaact aaaagcaaaa ggcactataa
      541 ggacaacatc aggctccctt aaatttaaag gcatggcaga aaatgaaaac actccctata
      601 aggagactgg aataagtgaa agcaaaataa gcttgttgag aggaggaaag aaaacaagac
      661 acgtatgctt taaagctgca gtgtgctaca tggaattgtt ctcttaagta gtggatttgt
      721 aat
//
LOCUS       KCPA01003403             818 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 375081tic ultra-conserved element locus
            uce-7799, sequence.
ACCESSION   KCPA01003403
VERSION     KCPA01003403.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 818)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 818)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..818
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="375081tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>818
                     /note="ultra-conserved element locus uce-7799"
BASE COUNT          232 a          149 c          169 g          268 t
ORIGIN      
        1 gtcttgctgt ggcttttgat gccagtgtac atgccagtat tgctcaaagc attccatatt
       61 aatcacactg ctttacacaa ggctgaaaat atccagagca ttttcatact ttatatttct
      121 gtctgaaaag taagaaagaa aagacaaatc aaccctttat gggtttagtt gttgcctttt
      181 aactacttag tagctgtatt taatagctag gaacccctgg ttaaacttgt gctcacattg
      241 cccttctggc atagtcctat taaatccata tgaagccaga tatgattatg tgcagatgtg
      301 gtgtgcttca ctgtatggga ctgggccaaa gactttagat gtggtgtatc acatggtgac
      361 ttacattatg aatggatgta ctatacgaaa gttgctgctc cttatttatt gcggtgtgct
      421 gcatggaaca tatttatttg aaagcattaa aataaacgat cctaaagcat gtgcataatg
      481 agagaactgc attgtctgtg tgctgctgta gaggttacat taaagtccac gtaacaatta
      541 cagtacatca gctgtactta agatgctata aaggttggct tgagtggatg gaatgagttc
      601 cctttccaag atgcctatta tttctaggca ctttaactat atttcagata cagttggtca
      661 ctgatacttg tcatgcaagt taacactaac agtctaacaa agggttgtgg ttcccaggta
      721 ttacaccagt attgcaaata aaatggatca ggcctgtttt gcagtgtggt tgatctttcc
      781 ttgccagcag tgctcttcat taccagaaat gtgactgc
//
LOCUS       KCPA01003404             576 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 375191tic ultra-conserved element locus
            uce-2592, sequence.
ACCESSION   KCPA01003404
VERSION     KCPA01003404.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 576)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 576)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="375191tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>576
                     /note="ultra-conserved element locus uce-2592"
BASE COUNT          161 a          133 c          123 g          159 t
ORIGIN      
        1 aataatgtat ttattataga tttaactaag taaaatagtt ctgtgctttt ccaggtggtg
       61 gtgagtgttc tgcagaactg cctcagtcac ttgcattttg gagattccgt ggcaccaaac
      121 gcgcgtggac tttaaagtgc agacccctta acataaaagc cagcccaggc tataccttcc
      181 ctccacgcac ttggcacctt ttccagataa gttacagaat tccattatcc aaattgttac
      241 acgtgtgtga cagaggttga cctttaggca tgtcaatcct ttttacgtag gcctcgggct
      301 ccagcctaat ggctcaaagc ctgatttact cactgtaata agggcaggag gtcgagcaat
      361 tgtcagcttg cctgctcata ctcgtctcgg agcctggttg aaggctgtta acacaaagct
      421 tttcaaagtg aatttacaac caccaccact gacataggcc aatcagtaca ccataaatgt
      481 caggttagtg aaattgagca gtaagtaaag cactgccagc ccactattgg ctgaaatcaa
      541 ttgctcaagg tttaaccgag aatagcaatg cgtgtg
//
LOCUS       KCPA01003405             444 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 375293tic ultra-conserved element locus
            uce-4061, sequence.
ACCESSION   KCPA01003405
VERSION     KCPA01003405.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 444)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 444)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="375293tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>444
                     /note="ultra-conserved element locus uce-4061"
BASE COUNT          109 a           99 c           90 g          146 t
ORIGIN      
        1 gggcactaac tgccagtgtt ttacaagaaa gtacagcaat tatatcatct cataggcatt
       61 gttaatttaa ccctcagtaa tcttatttca cctcgccacc attgcagtct acagcctaaa
      121 ccagctgttg aaaataacct agtttaaaga gttcacggca acgtgaggga ttcatcatta
      181 tatatttact gtctgaggct gatatagctg taaggttttt cagatgccat tgatctattg
      241 cgcatgttcc ctccctgggt tgcaggacgt gcttctattt gcataaggcc ctgggcaagg
      301 ttctttcttg cattgattgg cctgtccaag ggagcctgat gtgctcctgc attgatcacc
      361 ctgtcttttc ttggaaggca gtgttgagtt catctcaaac ggaaaactct actgtcgcaa
      421 ttttattcag atatagtcct tttc
//
LOCUS       KCPA01003406             501 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 375400tic ultra-conserved element locus
            uce-2379, sequence.
ACCESSION   KCPA01003406
VERSION     KCPA01003406.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 501)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 501)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="375400tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>501
                     /note="ultra-conserved element locus uce-2379"
BASE COUNT          151 a           89 c           90 g          171 t
ORIGIN      
        1 atctcactta tggccaaatc aaaggaaaaa ctgttaagtc aattctacct aagtcaacct
       61 cggtggccaa actggcacag aatactaact aaaccaagtc taacttttca ctgcatacta
      121 tgtgcctgta atttaaaagc actctgtaga gggctgatga aactgaactg tgtgcactct
      181 gatcgtgtgt tagttgagtg cttattcaga cagcacaaac aagtgcagag agtgcatttc
      241 ctagccttaa tatgggaggg gtagtttcct gtagttcata ggcttttatt attgtgcata
      301 aacgttagaa aacatcattt actaatcaat tttatgtatt tgaatattgg caattggtgt
      361 tttttcatct gtaccttaga ctccagtgtc atgcttactc attagagatt tcattaaaat
      421 ttaaaaacaa aacttctgcc atagttttgt ttctttacgt aatctgcatt tggtattagt
      481 gcttgcaatg gtattaaaat c
//
LOCUS       KCPA01003407             406 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 375505tic ultra-conserved element locus
            uce-7015, sequence.
ACCESSION   KCPA01003407
VERSION     KCPA01003407.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 406)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 406)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="375505tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>406
                     /note="ultra-conserved element locus uce-7015"
BASE COUNT          147 a           60 c           71 g          128 t
ORIGIN      
        1 aaggagaaac atagaaaaat aaactggatt aagaaacaga tgaatataat gaccttcctt
       61 actctcaatc atatgctgcc agataagtgt ttgagtctga aaaattgcac taatgaagct
      121 atttgaaggc ttttgtggac aactgcttac tctttgaaga ttaaatgaat gatgttgatg
      181 tgattaatct tagtacaggg agtgatgcag cagccagaaa ataccttggt gattttcata
      241 attaaactga atcaacattt caaagaaatg ccagtgttat cacttgtata ttagaattac
      301 attcattaga cagaagaaac aaataatttg agcaaacaag attttccttt tggtgtactg
      361 agacttctgt catgtctcag agtatcttac tataaatcat cattac
//
LOCUS       KCPA01003408             531 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 375611tic ultra-conserved element locus
            uce-3852, sequence.
ACCESSION   KCPA01003408
VERSION     KCPA01003408.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 531)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 531)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="375611tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>531
                     /note="ultra-conserved element locus uce-3852"
BASE COUNT          161 a          125 c          132 g          113 t
ORIGIN      
        1 aaaaattaaa gctgaaatga aataatagaa aaacttttcg aataccaatg agtcaaaatg
       61 tttcagaatc cgaatcattt tcattgtacc catcctctgt tcctatgtta ttactcaagg
      121 gcttattgta agagttaatg ctacccatag cggagccatc gcagaggtgt gtcctgccca
      181 aattgtcttt tttaaaacaa gcgaagttga aagccgtcac tgaactggag ggagaaaaag
      241 gcatcatggt agccaaaatg agtgccaggc agtcagccac gtctttgtta ggagcacaag
      301 ccagggctgg cgtatgacct gggcacaaac gcagacaagg caatggttag tactgagggc
      361 acctggggca cccagcgttc ctcaggtaca tctctaggtg gggacatggg tcggacatgc
      421 tgggggagac actgactgca gtcaccggga ccacaacgag cactgaaacc gggcagcaaa
      481 cactgcaccg gttccatcaa agcactactc tgctacagca cagacagcac g
//
LOCUS       KCPA01003409             567 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 375719tic ultra-conserved element locus
            uce-7599, sequence.
ACCESSION   KCPA01003409
VERSION     KCPA01003409.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 567)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 567)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="375719tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>567
                     /note="ultra-conserved element locus uce-7599"
BASE COUNT          175 a          105 c           97 g          190 t
ORIGIN      
        1 tttcataagc tgtactcaaa gcagtctgac tatgagacct aactcgtgac acgtgtcagc
       61 ttcagaaaag actcaaacaa aacttttcac attaaaaaaa attgcatttg aagtcctttt
      121 tcacccaaca cataagagca cacaagtctt gacattattt cattttgtta tgcgcatctg
      181 tcaaggaaca gagatatgat acagctgcta aaaactgatg attgtggaac agtgaaactt
      241 gacagcattt catttccttt atgttctgat tatacattta tcaggaaacc tgtatctctt
      301 ctagttgagc tagaaattgg tagaattcag gaactcaaag gcttggcaaa gaactgtcct
      361 attatttggt atcatcttac attttagaga agttgcttgg ttgagtcatt gttaaagctt
      421 ttgcttcctc tttcattatt gtggttcact atccagagat cgcatttcta taggccctat
      481 aactgttctg cagcacaaat taaaggctgg gatatttcat acatatactt cgaagtttca
      541 atggttgtca atcacagttt gtaaaat
//
LOCUS       KCPA01003410             749 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 375828tic ultra-conserved element locus
            uce-1961, sequence.
ACCESSION   KCPA01003410
VERSION     KCPA01003410.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 749)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 749)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..749
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="375828tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>749
                     /note="ultra-conserved element locus uce-1961"
BASE COUNT          267 a          121 c          143 g          218 t
ORIGIN      
        1 agaataacac cattgaatca aaagagggga atataaatct acatagaatt cttgtatgct
       61 aatggaaatt aaataggaga aactgagctt tgctttcgag acagcagtta gacatttgag
      121 agctctatca aagtaaataa ccacatctca aataccgttt catcatttat agtttttatc
      181 acatcatata gcataacttt cacatgagaa caaaggtcat tttaaagcaa actgttgttc
      241 tagggtaact tttaatttga ggactaaatg taaattgcta tggtgaatgc acgttaggtc
      301 actaaaacaa cggtagctaa actcagatgt gacctagcaa cccaggtgtt caggaaaagt
      361 gctgttaaca gtaaggattg atgatctaat caaactgtca cactcagatc ctcagcaggg
      421 tggttggagg ggaggtggag gaggataata ttcagaaagc aagcacatgc ttagtgttac
      481 tttaaattga tgctgacatt ttcaattgta aaaagaaatt ttttcctaag taatatagga
      541 aacaactctc ctaaccttcc ggaggatatc agataatcag agagcttgtt ttgcaaaagc
      601 caacttctca gatgtgtgac tttatgaaat acgaactatc agaagagatt caagatgata
      661 gcaagtattt taatgctttt cttttactta gataggcata aatcagtatt aagcgaaccc
      721 cgtacaaatg cacttgtacc ataaagtaa
//
LOCUS       KCPA01003411             720 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 375939tic ultra-conserved element locus
            uce-6241, sequence.
ACCESSION   KCPA01003411
VERSION     KCPA01003411.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 720)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 720)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..720
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="375939tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>720
                     /note="ultra-conserved element locus uce-6241"
BASE COUNT          233 a          131 c          117 g          239 t
ORIGIN      
        1 atttgcaaac ttcacatggt ttatctacat taatacagct ttcactaaca ggacttaaag
       61 gaatagatgt atactctaaa gatgcacatt tttagtacct tgaattatca taacataaaa
      121 atggtgtgta ttgctctact ctaatcagag tcatttttat gtggttgttg aaagcccttt
      181 tgcattccat tctgtgtctg gaggtctgta taaaactgat tgagaaaaac caaagtgaag
      241 acacctgctg gcttataaca caaatacgaa aatatcttag agcctgctga aaggagaatt
      301 ggaacaatat gtcattactg aaggctcact tgcaagttct aatgtattat aatgaaaaca
      361 gtatgacaaa cctaatgaga cagtgaagat ttgggtaatt gttcctacaa tgtgtggtaa
      421 cttttccagc cgttattggc aaacataaaa cctaatgaga ttttattaat ttaaatgcag
      481 tacatctgca aaacatttcc ttagttgcag tctcctctgc taatctccct tcccacacgt
      541 acttgatcct tttaagttaa ttgttctgca tagtatactt tctaaacaaa acatacaaag
      601 cacttaccat aaatgtgcat taacttattt cgccaaggct tactttttgt gggtacactt
      661 tcacattggt tggacagatt acagattctt tcctctctgt gaaaatgtgc ataatgaaac
//
LOCUS       KCPA01003412             575 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 376050tic ultra-conserved element locus
            uce-3371, sequence.
ACCESSION   KCPA01003412
VERSION     KCPA01003412.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 575)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 575)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="376050tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>575
                     /note="ultra-conserved element locus uce-3371"
BASE COUNT          131 a          150 c          117 g          177 t
ORIGIN      
        1 gagaatggat ttctgttgtc cttgcacggc accagcatcc cttgatgcct agaaatgcta
       61 taaacatttt ctctctaaaa acagctagga gagtccataa aactgcgtgg aacatcagct
      121 attaggggct cattgaataa ttcatccctc attgcaagcc cataatgtct tttctcagcc
      181 ttttgtgggg ctgttttctc ttcttttctc cttgaattat aaaaaggttg ccttcttttg
      241 ttcacatcaa gctgctgcta gctgaagctt tgtctgtgca aagccaaagt gtgagtttca
      301 atggactccc ccctctttgt tttccaagtt catctccaag tgtagattgt gtatagaagg
      361 ccttctttgt aaaagctgga aaagttgtac aaatgtttga ccagctcatt tggtactttt
      421 gtctcgcctt ctccagagcc tgtgcatgtg ctgggcagcg acttgcacac acaagcctgc
      481 ccctgcaccc tgatggcttc aagcagcagc tgtgcagcag cccttcacct ccgccttgtt
      541 caggttgcaa cctcctcaca gtcccgggcc aaaca
//
LOCUS       KCPA01003413             585 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 376158tic ultra-conserved element locus
            uce-4106, sequence.
ACCESSION   KCPA01003413
VERSION     KCPA01003413.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 585)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 585)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="376158tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>585
                     /note="ultra-conserved element locus uce-4106"
BASE COUNT          196 a          126 c           88 g          175 t
ORIGIN      
        1 cagacttctg caaaatccta aatttaaagg aaaggaaaat caagtagcta gcagcaaatg
       61 tacctcatgt gataatcaat tacttaacgt aaaatgcttg aaataaatgc tcttactata
      121 gattaagtca gctcttcaat taggagtaaa ttcatggcca ctcagaaagc ttcttttaat
      181 tgtgttctct gtggcaactt cttttccccc gacactcatc atcaacccac cttatacaat
      241 cagtccccca atgatcaacc tgagaaatca atctgctaat gtataatttg taaagctccc
      301 ctgactaaca aatggataat tgattctttc acaaatgctg catctcaatg gatatgaagt
      361 ggatgaacat aagactggcc aattttgtga gaaatgcaat atttacaagc taggaatcta
      421 aacattttaa tagttgtctg acttcatgcc ttttagccat ggtttgcagg caagccacac
      481 gcactttagg agtgtgaaaa gcaaagctat catacttcaa agctcctttt acttcaaaag
      541 gttcccatca cttctacaac ctcctcttaa agaattttca gaaac
//
LOCUS       KCPA01003414             643 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 376268tic ultra-conserved element locus
            uce-3570, sequence.
ACCESSION   KCPA01003414
VERSION     KCPA01003414.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 643)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 643)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..643
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="376268tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>643
                     /note="ultra-conserved element locus uce-3570"
BASE COUNT          200 a          136 c          105 g          202 t
ORIGIN      
        1 attaatacca actttaagct aaacattaaa ataagaacat cacagttgtg ctctccgatc
       61 cgcaagtatc actttccaaa gcagaaacat tcacaatgca ctagcattag tggaaacttc
      121 tgtaactggg gagggtggga cttgatgtgc acaaacattt ccaagccagt tacccctttg
      181 catatttttc tgagggggca tccataagta taataaaaaa cagaaactca tacttacatc
      241 ctattccatg ttactttcca agctgtgagt ttcatcttgc attagtcacc atatgatctc
      301 tatcataatg gtgggggtca atgaatagat tagctttatg ggaatttaca gttcttccat
      361 gcatctaaag tttggtaagt ctggtaacca ctgacctagt tttaatcttc ccccactctt
      421 acgtttcatc tcttcaaaaa tcttggataa tgttacaaat ctacctaaac acactcaagt
      481 gtatgtctta tactgcagcc ccgtttagcc ttcacttata aatatcttga cttaatgtat
      541 gtgtagcaac ttaagctgtc cttattcatg ctgaagtgag aagactgaaa aatactcagt
      601 agcaatcaaa gtcttagcat aatgatgtca gggccacttt aac
//
LOCUS       KCPA01003415             717 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 376382tic ultra-conserved element locus
            uce-261, sequence.
ACCESSION   KCPA01003415
VERSION     KCPA01003415.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 717)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 717)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..717
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="376382tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>717
                     /note="ultra-conserved element locus uce-261"
BASE COUNT          235 a          159 c          113 g          210 t
ORIGIN      
        1 tttctcccgc aaatgcaatt gcacttatca tatattacca ccaatttcca ataatgcctg
       61 acttttatgc caattactct ccttctaatc aaagttaaat aaaagcgcat cttcatactt
      121 cctctggcta aaagtattca gaaacctata aaagcagctt gcagctaata ttgcacactg
      181 tgtctaggtc tgtcacacaa aagaaagatg acaagttcac tgcaataaaa attccatgct
      241 tagaagacta gagctgctac ctattagtct tcattacttt gcagtcttct gacaactgta
      301 gcaggctgct gagccccaaa tgggggccat aatgtgatct gatgatatat gaagagctgc
      361 taaagggaga gtgaaccatc ctagcctata cattttaaca gttccttttt actgagagcc
      421 cacttcacca caagacttca aaaatctgct gcctcagcta ttggtgcagt aaatctgcca
      481 actgtgcctg caaccacatc attttacact ggctacagca gccaatataa tgagtcaata
      541 ataaaccaag gaccttatag gccatgaata gctggtttat actggcagat gcaagcataa
      601 ctaaaacctc tgaccaaaca aaaacacaaa ggattatttc tgtgcttcct tgcagttaat
      661 tatcttagtg catatttaat gtgttttcta aaaataaagt aattattaat tgccata
//
LOCUS       KCPA01003416             455 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 376493tic ultra-conserved element locus
            uce-6333, sequence.
ACCESSION   KCPA01003416
VERSION     KCPA01003416.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 455)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 455)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="376493tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>455
                     /note="ultra-conserved element locus uce-6333"
BASE COUNT          111 a          120 c           89 g          135 t
ORIGIN      
        1 gggtttggct gaggatttta gtgaggtatc accgggatca ccttccctct acagcaaaac
       61 atctgcactt gctattccag atacagacac ccaggagagc ataaatttcc ctgaatagat
      121 gtattgtttt accatttatt tcctcacctc ctcagctcat ctgaatttcc aatatattag
      181 ctggtatgtg cacggttccc cttcactaca ccagagcaga ttagtgctcg ttcgcctctt
      241 tccttgcttc tcttcagatc gttacacatg acaaaacaac tgtcctaatt acagcaagtg
      301 ttcccagctc tgtcaccgtg acaattactg caatgagggc tcaatatctg cagcagacag
      361 taaagtatta ctgcagttgt gtttgatagt gctcaatcgt cccctggagg attctccgtg
      421 ctctgcccat tcgctaacag ggctcgaaag gtgcc
//
LOCUS       KCPA01003417             733 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 376601tic ultra-conserved element locus
            uce-4693, sequence.
ACCESSION   KCPA01003417
VERSION     KCPA01003417.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 733)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 733)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..733
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="376601tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>733
                     /note="ultra-conserved element locus uce-4693"
BASE COUNT          156 a          153 c          199 g          225 t
ORIGIN      
        1 catctgttac aggcttgcgg aactgtggct gtttgaaatt aaacgtgatc tttactgtac
       61 cagctggggt ctgtaatgta tctgataaat gaagtcttcc cgtcggtttc aggtcatgca
      121 aggaaaaggg caaatctggg gagggagctg ggcggggccc tttgcttttc acagtcaggc
      181 gagaggagtc tggttgatgt ctgcagcaga taaaggagac gaggatcatc aaaagacctc
      241 agagcccttt tatctttttc cctctaattt catttgtcgc tgctgtgttg tctgcctgct
      301 tgtttccccc gacggggtcg ggagcaccag ggccctggct gaggtagtag tttgtgctgt
      361 tggtcgggtt gtgacattgc ccgctgtgga gataactgcg caagctactg ccttgctagt
      421 gctggtgatg atcagctgcg gaggaagaca atgacaatgg gaatcccctt tgtattcccg
      481 ggattgcatg ctgctgaagt ggcaacaatt ccttctcctc ctagttctgc aggaggaatc
      541 tagccttgac cacgacccca tcagtaggat gctgtttctt agagctggat tttcacgctg
      601 ttttacctta atttgggctg aagagctgca tttcttctca tgcttagacc ttattattca
      661 aagaggtgga tttttgtttt tgtgaagatg gcaatgacag acttgtattt tcgtgttctg
      721 aatatgcaaa act
//
LOCUS       KCPA01003418             718 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 376711tic ultra-conserved element locus
            uce-6937, sequence.
ACCESSION   KCPA01003418
VERSION     KCPA01003418.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 718)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 718)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..718
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="376711tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>718
                     /note="ultra-conserved element locus uce-6937"
BASE COUNT          252 a          140 c          133 g          193 t
ORIGIN      
        1 gatttgacac atgcaggtat acctatgtga acagacacat aaagctggca ggttagaaac
       61 aaagctattt ggaatttgtc ctaaatcatt gacaaacctc cttaagaagt caccagtaag
      121 gcaagtaagc taatcagtcc actgctagta ttaagtctaa aacaatctcc agctgaaatg
      181 tgattaatcc atgcatgaca gcttaaaggt caaagctaga atgcagagct tcttgactgc
      241 aaagaaagaa ctgacttatt tttatctctt ctttaaaaat tacagcagcc atgaagtggc
      301 tcaaggagca gagtaatgaa cgtcataaac ctgcctcata aaaatggcat tcatgcagta
      361 atacagcagg tcagatgagc agggaacatt tcattaaaaa ttccccttct tgcctaccca
      421 agagagactt aaaactaatc atataaaatg gctgagtgac accattaacg agcattaata
      481 ttttaaagct ttaatagtac aacagagcta ggctgttaca tcaaaattat acaaccttat
      541 tagacagtgc acttggctgc attgtacttg aactgtcact atgattggaa atattaaggt
      601 ggccacacaa ataccttgtt gactgtccat acggcttggt agatgaacca aattctggat
      661 gattttgtga agaacaagct gatttacctt acccatacca aaggagggag acctttac
//
LOCUS       KCPA01003419             746 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 376819tic ultra-conserved element locus
            uce-7529, sequence.
ACCESSION   KCPA01003419
VERSION     KCPA01003419.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 746)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 746)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..746
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="376819tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>746
                     /note="ultra-conserved element locus uce-7529"
BASE COUNT          226 a          152 c          146 g          222 t
ORIGIN      
        1 aatttctaaa gtttctatgt agacaataac taatttaaat aacttttatg ctaatattca
       61 ccttacaaaa taaattgatt tgtttgtgtg tgggtgttct tgagggctac acacacacag
      121 aagtcattta tcagtctcta ataagaaaca gaagtgacat ctgtcatgca ttccagtaaa
      181 cacattaagc aaacacaata ggaccccaaa atgtttactc aagtactcta attaattttg
      241 acttgctgga actgagtttt ctatgaatta aacacaaaga tccatgctct ctcctccccc
      301 ttgctgtagc tttttgtgca gtgggaaaag atttaaacta aagacttccc ttctggctct
      361 gccaaggtgc attttttcct catagacttg acttgcagta gaagttgatg tgagagtttg
      421 tcatggctgt tttgacagtc cggtcatcct aatccaggga tctggtccct gtggtttgtc
      481 aattatccta ctaaccctac agcgagagga gcactcaagg cactgaactg tcatccaata
      541 accaagaaat aatgtcagca gccagtgagt agggggggat gattttgaca acagagaagt
      601 gaggatcatt tcagcattta ttttatttat aggcattcgt aacaaattaa ttacatctca
      661 ctgcaaggct tcgctaaaac ttgctggatc cagacctgcc tgcagggcga ggagcaaaac
      721 tgattgcagc acggcagatc caagca
//
LOCUS       KCPA01003420             559 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 376926tic ultra-conserved element locus
            uce-2915, sequence.
ACCESSION   KCPA01003420
VERSION     KCPA01003420.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 559)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 559)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="376926tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>559
                     /note="ultra-conserved element locus uce-2915"
BASE COUNT          185 a          101 c           91 g          182 t
ORIGIN      
        1 tgcagaagag aacagcaaca ggaatggagc acaatgagta caggataagc agaaactatg
       61 gactcctgct ctagtattat actattccgt gatcatttaa ttttactttt tgattgaaat
      121 tttttacaat tacatgtatc ttacgttcag tttgctgatc aatttaacct gtttgaacac
      181 aaacataact actgcagttt caaactttta aagctgataa aaatgataaa atgacaacac
      241 agttagtctt cagaagtgat gggttcctgg gttgctaatc cggaatacgt acactttcgt
      301 gcctttgtct ccatcagcag ttctgacttc aagcagcaga atagaagcct agaaaattat
      361 ctctttacca ttagtaacac tttggaaaga tatttataat caaaacatta ccttgtgtaa
      421 gctgttaaat cctacttggt atctgactat aaataactaa tacctaagta atgtttaaac
      481 tgtaaagacc catttatgtt tgacaaatct ggacatgtct cacagacctt ctagtgtcat
      541 attgtaacag ggcttcatt
//
LOCUS       KCPA01003421             628 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 377038tic ultra-conserved element locus
            uce-6663, sequence.
ACCESSION   KCPA01003421
VERSION     KCPA01003421.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 628)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 628)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="377038tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>628
                     /note="ultra-conserved element locus uce-6663"
BASE COUNT          204 a          116 c          135 g          173 t
ORIGIN      
        1 gcgattgcct ttaaaagcgg aaccaaacat tctgttttgt atcagtcaat gtctagcgga
       61 ggtattttaa gctagatttt taaatgttgt aatgaacttt aaaaacagta gaaagcaaag
      121 cagattgcta gatagttaag aaagagttaa tggaaaatga actacatata tcactttgac
      181 aagaatctac atgcccaatc tgttcttact gaactacaag caaaaggcat ctgggttttg
      241 tccacttaaa gctttttgca aattgaaagg agtttggagt gggtgggagg gcataattga
      301 ggtcactgaa cccattccaa gctgtgtcat tgaaatttcc cagtgcttgt agtatgtaga
      361 agggtggctg ggcaaacaca ggcaagagaa agttgcaata cttcagtggg cagtgactat
      421 taggtaccac tagatctcca acttcattac aaagaacccc tccctcgctg ccattgtttt
      481 gtgttactca tgtatgcaca tgcacacacc gtacacatgc catactcaca aacacatcca
      541 taaaagagat aaaaggcaag ggaaactttg ctttgatcca cagaatggag tggatgtaag
      601 gatgccaatt tagcatgtca gtttgaac
//
LOCUS       KCPA01003422             835 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 377146tic ultra-conserved element locus
            uce-1908, sequence.
ACCESSION   KCPA01003422
VERSION     KCPA01003422.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 835)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 835)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..835
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="377146tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>835
                     /note="ultra-conserved element locus uce-1908"
BASE COUNT          247 a          149 c          177 g          262 t
ORIGIN      
        1 acagggactt tctgttttct gaggtgaggg ggtagaaaag tcagaaaata gggtctttta
       61 gactatcaaa cactgtgcaa actgaagccc tgataggatt tgcataccat tttatggaga
      121 aatggtgaga gggcctgcaa gtttggtccc tctaagcttc ctgttttaac tataaacttg
      181 tcatcctcta acctttctaa caaagacata aacacttcag ctacatatat tttgattgtt
      241 tcatgacagt ttactggagg cttagcaatg acagatttct tcattgtctt tttgccaaaa
      301 tttgtccttt aagtcatttt tgttgactgc cccttttagc agctcacctc acaatgagag
      361 aggagacaat taatgggagg gtgatttatc actgccaaaa actgtcaagg acttctgttg
      421 tagctggaga aaaagcaatt tcacattatg gcatttcatt ccgaatacat tgtatttaca
      481 gctcacagtt ttattttcag agcctattat caggtgaaac agttgcatct gaaatgttgt
      541 ttgtgacata ggtgacctgt taggatttga taagtattta cgccagagca caaggggctc
      601 acacatctgc tgttggcaga agcaatggaa aaaaataacc tggaaatgag gcgtttgatt
      661 tttctggttc ctacactcga gcatctgttg ctataattaa gtggcattca gtaattgcag
      721 agcaatggtg aaataaacat atgcattctt gccagctttt aggatttggt gtccttacag
      781 taggagacac aagcaaagtg acttcagcaa gaacaaaggg ttctgtaaca aagtt
//
LOCUS       KCPA01003423             411 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 377252tic ultra-conserved element locus
            uce-4414, sequence.
ACCESSION   KCPA01003423
VERSION     KCPA01003423.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 411)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 411)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="377252tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>411
                     /note="ultra-conserved element locus uce-4414"
BASE COUNT          115 a           90 c          105 g          101 t
ORIGIN      
        1 caataactaa atctaaagcc tgtgaaaggg gatggctgta ctctgtcctt aagagtaaca
       61 tatatagctt ttaatattct aacggtggaa tgcagttaag gacattcttt atttgaggga
      121 ggggagagag agaggagaaa gatttcatta cattcagcac agtatgagac taagtcaaag
      181 tagttttgct aattaaattc aattgctatc cattagacca atggaatgag atgaatctac
      241 catatagctg acacagcaca ggtatgcaat ttggctaaat ggccattccg aagctgcagc
      301 acgccttcct ccgcccgctc gcgtttccag gctcaccatt tccgcgcgga gcggagacgc
      361 ctctcgggga gcgcggccgt gttgggatac gcaggctcag ggcccgagcg c
//
LOCUS       KCPA01003424             726 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 377361tic ultra-conserved element locus
            uce-1123, sequence.
ACCESSION   KCPA01003424
VERSION     KCPA01003424.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 726)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 726)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..726
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="377361tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>726
                     /note="ultra-conserved element locus uce-1123"
BASE COUNT          224 a          157 c          143 g          202 t
ORIGIN      
        1 tcagttgtgc tcaatattta gttctgttat gtgcattatc ctgctgaatg atcaaattaa
       61 atgcaaacta gaatttgaat gtctgcaaac attggcaaga atctgcagct aattttagat
      121 ggaagatttg cagtgtctgt tgtttttcct gttcatttta gatgagtaaa ttgtaaaaat
      181 gttgaggaat ctgacctgct ttttgtctag gtttgcaagg catgccaggg gactacgtat
      241 ctcagggtgg tcctatgggt atgagtatgg cacagccaag ttacactcct ccccagatga
      301 ccccacaccc aactcaatta agacatggac ccccaatcca ttcatatttg ccaagtcacc
      361 cccaccaccc agccatgatg atgcacggag gaccccctac ccaccctgga atgaccatgt
      421 cagcacagag ccccacaatg ttaaattctg tagaccccag tgttggtgga caggttatgg
      481 acgttcatgc ccaatagtat aagggaactc aagggacaaa cagaaactat tttaagactt
      541 ttgaactttg accagatgtt gacacttaat atgaaattcc agacagctgt gattattttt
      601 tactttttgt catttttcat caacaacaga ggaccaatga aacaagaaca caaatgtgaa
      661 aacatgggct cactgaaatg aatatgtcca tgtacagatc ctctggaaaa aaaaagactc
      721 caagag
//
LOCUS       KCPA01003425             886 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 377472tic ultra-conserved element locus
            uce-4964, sequence.
ACCESSION   KCPA01003425
VERSION     KCPA01003425.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 886)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 886)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..886
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="377472tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>886
                     /note="ultra-conserved element locus uce-4964"
BASE COUNT          295 a          168 c          152 g          271 t
ORIGIN      
        1 aaataataat aaaaatcaat aactattatt cagtattcat ttgatatttc acaatggacc
       61 actgtgaatt tgaactccag gaaaggttgc tgtttcaagc ctccaaaggg ttattatata
      121 cagcacagag aaatagtaat ttaaaaacat gcattttctt ttgaatctaa ctaaagatgt
      181 tagaagactg aaacacatta attaaaatta ccaacttaat aaaggcactg ataacaaaac
      241 agatatagac agagtctagt tacaacaggt aatagatgca ggaaagacta tccattaata
      301 ccatgggctc aaagcaacac gcctcacttt taggaaacat accagcagaa ataactagtg
      361 tattatcctg tggttgctta gagatgactt aacgagttcc tgagaacagg ccattagcta
      421 gcatttgctt ttgctattaa agctggatac tgttttcacc ccttctcttg tctcccgcag
      481 ctcagcacct gtctttgttt gggagtgaca tctatttctt tttttccacc aggaattcgg
      541 tgcattttta ggcttgagtg gcttaggagc aaaccagctg tgaaattgtt tcttgagata
      601 ctgccctctt cataacattt gcgcaagacc ttaataaaag aaatggcctg ttgccctccc
      661 tgtccctggc caattgcacc catgaaatat atttcagtaa tgcaattttt tggggctgtt
      721 gaaacaattg ccgctataac tgtaaaacac agctagattg cttctaaact actttcaaaa
      781 agtaagtgct cacaaaagag tcagttctca atctactttt atccttagaa gacagaggaa
      841 agtcatattg agtaaaaaaa taatttcaag gctgtataat ttatag
//
LOCUS       KCPA01003426             478 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 377582tic ultra-conserved element locus
            uce-3260, sequence.
ACCESSION   KCPA01003426
VERSION     KCPA01003426.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 478)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 478)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="377582tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>478
                     /note="ultra-conserved element locus uce-3260"
BASE COUNT          158 a          109 c           91 g          120 t
ORIGIN      
        1 tttagcaaat cgagcttttc agataaggta aaattagaag atctggcctt cccaaccatt
       61 gttatctttg aattaaggaa gccgttcctg gagccaccat gcagtcccta gctctgctca
      121 gctctttttc acaaacagaa aaagatcagg cttaactagg ctagtctcat ttaggcccac
      181 gcctacaagg gagggtttat taaaattcct tcagcttaag ctgacgcagg ttcaggaaat
      241 ctgcttaagc caagcctgac ctacataagg cttcagactg aagaaggcga gaagaaacaa
      301 gcaaaataca cttttgtatg aagagaccag acatatgcag gatttaaaaa cataaaggtt
      361 taaagattag cacgctaccc agctaaaaat tacctaattt agctggagta acaagctctg
      421 acacatctcc cagctccctc acacaatctc aaactgaaac cgtgctggag atgatttt
//
LOCUS       KCPA01003427             550 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 377691tic ultra-conserved element locus
            uce-6009, sequence.
ACCESSION   KCPA01003427
VERSION     KCPA01003427.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 550)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 550)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="377691tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>550
                     /note="ultra-conserved element locus uce-6009"
BASE COUNT          189 a          111 c          107 g          143 t
ORIGIN      
        1 aaagggcagg tgtacctata cttcagggct gctctgtgac tgacctagtt tctacgctct
       61 ttaaaggcta tttaaactaa aaaaggtaac acattcttac ttctttctga aaaatccaca
      121 gaatagaata ttggctgaaa agagaagagc ccagaagaaa gaggagtaca aaagcatgcc
      181 tgcttgtctg tgttcaacac aaagaacatt aaatgaaaac aactggcatg ctgccaaatt
      241 cctatacagg caaagagatt caaataaatt gatttcacgc atcacactga cctgggatca
      301 gtgagcagtg gtacaatata cttgctgctc catgtggggc aaagcccatt aacgttatca
      361 gagacatgag ggggagcagg gaacagagaa ggaacccaaa ctctgcaaat aatcactctg
      421 cttgaactgg agcgcttggt ttcagtttac taataaatac aacataatgc aagagcttgt
      481 cctctgctca cctcaaaggt ttctattttc aaattacaat aaataaattc tacttttaac
      541 acagttgttc
//
LOCUS       KCPA01003428             377 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 377793tic ultra-conserved element locus
            uce-6841, sequence.
ACCESSION   KCPA01003428
VERSION     KCPA01003428.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 377)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 377)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="377793tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>377
                     /note="ultra-conserved element locus uce-6841"
BASE COUNT          135 a           55 c           70 g          117 t
ORIGIN      
        1 agtataattt aatttttacc atcatatgtg cataaaacac tggaggcatt aaaatgatga
       61 aagaagtgtt atgctaagac cacaaaaaag gatgcaaaaa tgatttatgt tactttcgtc
      121 tcctatttgc agttcattaa gttactgtct tctttgacca agtgaaaatt aaagtacttc
      181 agagaagaac tttgggttca agcatcatta gaggaagaga aatgggttct ttgatggact
      241 tgactgcaga aatctataga gcacaactta atcagactgc acattgatct ctgatgctag
      301 aaggcagacc tatgattaaa caaatctttt taatgcatat ttttccttaa aaagcaggat
      361 atgatgcatg agaatga
//
LOCUS       KCPA01003429             776 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 377901tic ultra-conserved element locus
            uce-5649, sequence.
ACCESSION   KCPA01003429
VERSION     KCPA01003429.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 776)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 776)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..776
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="377901tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>776
                     /note="ultra-conserved element locus uce-5649"
BASE COUNT          198 a          201 c          176 g          201 t
ORIGIN      
        1 agatgctcat tactgaaaac catagggaaa acttaaagaa aacttgttaa agaaaataca
       61 ttcacacaaa gacatacaag atgcactgag acactgacag aatatagttc aaaacactgc
      121 attcagaagg aggaaataac agtgagtagg tggatcagag ccacatgttg ccaggttttg
      181 aatttcatac tcatattctc cccgcctcct tctccccagt caaattacgg aaagatcatt
      241 atgtttataa ttcagtgaac gactttaacg caagtctggt tactgcactg tactgtaaag
      301 atcactgcat gcataccttt tcctctgagt gccactgctg accagtaagt ttggttgctg
      361 tgggccctga ctatgcagga ggaaagtgtc tatgcttggc acggtggctg atgcctcctc
      421 acttacttta gggctgccga tcttgctctt tcccagcttg cctttgctgc ggcgggattg
      481 ctcgtggtcg aactctaaat cctccagtcg ctgggtcagg gcaagctttt gctggatagc
      541 catgcgcagc agagagttca gggtcttctt ctcatcctcc gcagccgcca gctgcctctg
      601 catctcatcc agctgtgtga cgtactcatc acacctagag acagggcaga aatctgggaa
      661 aacggcccaa gagcggactc tagcagcgag cacattcccg ggcttcagcc gaactcagag
      721 cccagctttt gctgacccta atcctggggc agcctgaatt cttctgttcc cacttt
//
LOCUS       KCPA01003430             472 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 378000tic ultra-conserved element locus
            uce-6575, sequence.
ACCESSION   KCPA01003430
VERSION     KCPA01003430.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 472)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 472)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="378000tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>472
                     /note="ultra-conserved element locus uce-6575"
BASE COUNT          158 a           92 c           81 g          141 t
ORIGIN      
        1 ttttcctgca gcatttaatc tctaattatt ttttccatga taagacatcc catgctgctg
       61 cagaacaagc taaatgattt ctatttgggg caataaaggt tttttcactt ctattaccaa
      121 agggaaatat tagggaggtc tttgagtgtc catgctatat gagcaaacac cacttaagcc
      181 agactctgct tcctaaacaa gtatttaatc tcctcattaa agatatatga aactagaaat
      241 caatgagcac tggtggctag agctttatag cggaactaat ggctacacct tgtctaacat
      301 aagaaacttc acttgtggtt tacagctgct acacatggag aaacaggaac ctaagaggaa
      361 aagttatgct aataattaca gtaatggata agcaggccac ataaatgtgt gactcaagca
      421 tattcacttc acatttcatt cccttaaaag acacagctct tactaaaagg tt
//
LOCUS       KCPA01003431             647 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 378104tic ultra-conserved element locus
            uce-547, sequence.
ACCESSION   KCPA01003431
VERSION     KCPA01003431.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 647)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 647)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..647
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="378104tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>647
                     /note="ultra-conserved element locus uce-547"
BASE COUNT          220 a          106 c          126 g          195 t
ORIGIN      
        1 gaaataggcc gtaaagttct attcctcaca aaggcaagat atattattgc tgtaacgcca
       61 ttattccgct ccatcacttt taaaccttgt tcccattatc tgcaagttaa atataaccct
      121 atgtaaaaac aggaaggaca gtgctaagtt gtccagctta acagcacaca cttaaagcat
      181 aatagagcac ttgttactgt attttatgga acggaaactc caaatgtaaa gatgtattaa
      241 ggaaatatct caaagttatt agggaaggat atttacaatt acagattgct ttatattatg
      301 cttttatgaa catctcagga aatgaaatag ccctcagctg tagagagtga agagggaggt
      361 aattttcctt aatacgggtg ataaaattaa tctgattgaa atcgctagcg attatttcgc
      421 agaatactga gtggcagtac aatcacttac actcttttat atttttttag tcaaagctcg
      481 tgtagatgaa agctaattac aaagtagtga tgtgaagcgc taaggaaata gtttgtatag
      541 catagaacag gcacagctaa ttggggtttg tgattacaca gattgttgtt agggagaatt
      601 aactaccagc agtctctcct gcaaagcttc tcatcaaggg aaagtaa
//
LOCUS       KCPA01003432             660 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 378215tic ultra-conserved element locus
            uce-3704, sequence.
ACCESSION   KCPA01003432
VERSION     KCPA01003432.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 660)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 660)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="378215tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>660
                     /note="ultra-conserved element locus uce-3704"
BASE COUNT          200 a          122 c           98 g          240 t
ORIGIN      
        1 tcaaaatgca cgtttttcat tattttcaca ctaatagctc tcttcaacgc tttaactttg
       61 attttttgtc ttttcaacat ttctcattta tgaaacagct gtcaaaggtt ttgacatatt
      121 cacattcagc aggtagaaag ttaaagttgg ttgcccccat tacagaaaat gatgcttaat
      181 gagaacttgt gagaaaaaat gtcttcgtgt tgcattacaa gattcagaat ctgcacttac
      241 tctttacccc tttcttcccc tttcgttcct tcttgtactg ttccttcagt ttacttatta
      301 gtccctggtc tacatcccaa acctcagcag ttggggacag gtcatctttg tctacatgca
      361 gcatattatt aaaagaaaaa aaatcagcaa ttggcaatgc aagctgttgg tgatttactg
      421 tcaaagttat taataatttt ttattttaaa ggtgcagtct cagttttaat tccataaaag
      481 accaagtttc atttcataca gttttccaag gcactgtatc agttacatat ttgaaaattg
      541 tatgttaatt tgttaccaag gagcttaagc ttcataagta actttttaag atacttcaaa
      601 atacacaaga attcattggt gttcagaaac aattactgca tctttagaaa gacagtgtta
//
LOCUS       KCPA01003433             732 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 378428tic ultra-conserved element locus
            uce-5684, sequence.
ACCESSION   KCPA01003433
VERSION     KCPA01003433.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 732)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 732)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="378428tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>732
                     /note="ultra-conserved element locus uce-5684"
BASE COUNT          207 a          144 c          155 g          226 t
ORIGIN      
        1 ttttgtttgc ggtggccttg cctttgaaga actaaatctg tagcaaacac acaatgaaaa
       61 aggagctact cctaccagag aaaggaaagg cttcagagaa aggggtgtag actatttcct
      121 ccctcagcta caaatcagca tcgaactgga gtgtgaggag tgaatattaa cattcagcag
      181 gctgttactg cgagccataa tagacatgag cattgactag acccaatatt agtgatggta
      241 ctgggaaacc atccttgctt ttggctgcct gaaggcagta gtgatcccct gcttgtccta
      301 tctgtcagtc tatttgatct ccaaatgaat tgcttttgat aacagctata taaatgcaga
      361 actgttccgc tgggccttct taaatgagac tcctctcttt catctcccag tcatttcaaa
      421 aagcagatag acttgttaga ggtttttaat gcaatgattt atgttttatc ttgcctggtt
      481 tgaggcagca tttatttagc actaaattct tctcaagcct atatgtgagg gagaaaggtt
      541 tcagcacaac atttgtgtct gtgtgcacat gtgcatgtgt ggtgtactct gcctcatcag
      601 agggaaataa gggatgtgct ttctttttag gaatttaatg ctccaattca cttggatcat
      661 tgcacctcca gctaaattaa acaggaagga aacaatattt gataatcctc atgttccatc
      721 tatggcaagt aa
//
LOCUS       KCPA01003434             619 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 378534tic ultra-conserved element locus
            uce-5475, sequence.
ACCESSION   KCPA01003434
VERSION     KCPA01003434.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 619)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 619)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="378534tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>619
                     /note="ultra-conserved element locus uce-5475"
BASE COUNT          227 a           98 c          105 g          189 t
ORIGIN      
        1 ctcatgtaca gtgcacctca ggtctaccaa gtttcaatca ggaaggtaaa atgtaaatcc
       61 agcgtgctac cttaaaatga gcaaaactaa aaggaatttt tttcaaagat tgcagaatgg
      121 gaactgcata gagcttgtag taaatgtcgt aataaaggtt cattgattaa aagaaattgg
      181 ttctattgct cataatagca tctcattgat tgaaaaacat tgcctggaat ggtttcctcc
      241 aaagcggcat ctgttatgta ttaacctttc agccttcaga atcatgggat atgaatttct
      301 tgctcaaact actggtcaga tgacccatcc atgacattta ataaattgca actctgcaca
      361 tagattcagg atttcataaa aacaggggaa aaaaagaagg tgcagtataa ttgagttctt
      421 tatgttccaa aattgtctaa actcagattg taaattctat tttattaaaa acatgaaaat
      481 catccagcct ttaatagtaa acagtaatgt aatgattgaa cattgaatga aagaaaatta
      541 gtcatgtcta atttgttaac aaactctaca aggacaagac agtatttgaa ctagttaaaa
      601 tgaatgtagt tacctatca
//
LOCUS       KCPA01003435             329 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 378639tic ultra-conserved element locus
            uce-5050, sequence.
ACCESSION   KCPA01003435
VERSION     KCPA01003435.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 329)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 329)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="378639tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>329
                     /note="ultra-conserved element locus uce-5050"
BASE COUNT           59 a           87 c          100 g           83 t
ORIGIN      
        1 aggggggctg gcagccctgc tggggggcgc ggggggaggc agcagatggc agatggcacc
       61 gctgacaccg cttgtgggct ccggcgctga ctgattaact ctgctgtcgg agagccctct
      121 gctagcgtca gggtcaaaca aattgttttc acgcttcgtc agaggtttac ttaattagtt
      181 catttgcaat tagatctctt tgtagccggg atttttagca aagacatcag aaggagctga
      241 cggcgggctc cggctgtctg ctgttttggg ctttcccaaa ctcgccctgt cctctgccac
      301 gctctcggaa catcccttgg actgtgcca
//
LOCUS       KCPA01003436             825 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 378752tic ultra-conserved element locus
            uce-7569, sequence.
ACCESSION   KCPA01003436
VERSION     KCPA01003436.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 825)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 825)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..825
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="378752tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>825
                     /note="ultra-conserved element locus uce-7569"
BASE COUNT          214 a          151 c          165 g          295 t
ORIGIN      
        1 gtcagtggct gttcaccttc cagcagcaag gattagctgt ttacttttgc agacaaaaga
       61 ggggcaccct gggaagccat ggctaagaac tttcaaagca gcttccatta tctactgttt
      121 aggtcaagcc aactagcact tctgagtaat ttataaagtg ctatactctg aggtattgca
      181 caatctcatt atcattagtt tttgcatatt taactacagt ttttaattag atggtatttt
      241 attattcatg cacataattt gactccaact caggcagttc tcttgtaaaa ggaaattcat
      301 ttgaatcaaa agtttgtact tcatggtgtt tagctggcaa gtggtgcaag tctgcagtct
      361 gtaatggctt tcttttaatt tagctaatag ctatcatgtt atgtaccttt ataaatttgt
      421 taaattcata gcactgggag ttgtctctct atgcggtaac tgtaagtagt ttgctgtgtt
      481 tggctttcac atacaaactg tttgctcagg ctccttgatg tattattaaa attggtaatg
      541 gactccaggg acgtcatcta gttatatgcc ttcatttgca gaataaacca tgcgttgttt
      601 tcatctttac tcatgattgt taatggcatt gatgatgaga ggggtgtttt tccactgcct
      661 ttatcagtgc tgctttatta tgcaggcaaa atagccaagc tgctgatttt gtttaaggtt
      721 ttcaattagt catttgactg aacacatctg ttactggcag gcttccagcc ctggactgga
      781 gctattacta gtttacacct gctgaaccat ggccataagc tgtga
//
LOCUS       KCPA01003437             423 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 378858tic ultra-conserved element locus
            uce-4284, sequence.
ACCESSION   KCPA01003437
VERSION     KCPA01003437.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 423)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 423)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="378858tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>423
                     /note="ultra-conserved element locus uce-4284"
BASE COUNT          129 a           64 c           71 g          159 t
ORIGIN      
        1 ctctgttgtt tcaagattcc ataaactgga gtcttatata gcagctgcta aagcaggagt
       61 tactgtctaa atgatattca caatgagtat ttggaaggtt tacaattata cccttgctaa
      121 taaattgtgc tattttcccc aacagtttta agtgctaatc ttcagaaggc attttaaaat
      181 tagctaaaat tctgtcaaga gatttacaaa aattgttagc atgaagataa ttatgtcaca
      241 gtccttggac tccatctctg attgtgtgta taaatcagaa aatgtcagct gtgttttccc
      301 ttaataatta tccttgcagc aatgtattcc agtttagatt actattatag tgttgcttta
      361 ggtttataaa acacaagttt tttctgctga tgaaataatt cagatttctg gtgattattt
      421 gtg
//
LOCUS       KCPA01003438             403 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 378961tic ultra-conserved element locus
            uce-6044, sequence.
ACCESSION   KCPA01003438
VERSION     KCPA01003438.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 403)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 403)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="378961tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>403
                     /note="ultra-conserved element locus uce-6044"
BASE COUNT          135 a           74 c           84 g          110 t
ORIGIN      
        1 gctcacatta gcccttggaa agactctgat gtgatgcttt gtctgctatg ttcaagccct
       61 cttctatagg caacctacca cttctaccaa aaacaagaat gaaagaaagc ctaaaaaggt
      121 gaagaaggat tttcattatg aagttaatta gcttctgagc caagctgcac cttttcaagg
      181 ggaggaatta gagggattta attgctttat cagccttctc tttgattttc agcaatcagg
      241 ccgattccat ttaatttaac tgccacagat gagaagaaaa ttgatgcact cacctgcctt
      301 ggagcagaaa gagagagtga gaaagaaaag ttggagaaat tggcaaatat agtgtctgca
      361 gattaatgaa aaccaacagc atttgctcac aattggaaat gat
//
LOCUS       KCPA01003439             862 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 379075tic ultra-conserved element locus
            uce-335, sequence.
ACCESSION   KCPA01003439
VERSION     KCPA01003439.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 862)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 862)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..862
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="379075tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>862
                     /note="ultra-conserved element locus uce-335"
BASE COUNT          328 a          176 c          145 g          213 t
ORIGIN      
        1 cttccttgat gataaagaca aaataaaaaa aagaagtaaa gaagtcaaaa atcaaatgga
       61 aagtaaaatc ttttaaaaac ctatgttaat ctattcttct gtgattgata gcaatggtct
      121 cccaaaccat ctaagcagat cgtgactctc caggctggca gatattattg aaaaaccctc
      181 atccctcgca aaccaagatg tactaaaact tacaacacaa cccctactat attctgtaaa
      241 ataccacagc tagagtaaag catgaagatt tacaatacaa tcactttaag tgccccacag
      301 ccaacatcaa tcctaatcct taagagggct aaaaataaag attggagggc agctcacaag
      361 gtagctgtga tcaaattagg aggctgaaag gacagagagg gacgaagaag gaagcttata
      421 aacatctgat ccagctgact gtggccatat ggcagctgct gcccagataa agagattaag
      481 aatagaggag tgcgattaca gctgtctggc caattcaggc agctcaaatc tacaagttct
      541 aaattagtcg caaatacaaa aactccttca aataattatt gttacgctaa ataaaagatt
      601 tcaaatgcta catgcaagga agaaacagtc aaaccattct cccgggtaca aaagttttta
      661 aacacataac tgatttctat ctttcagaag cactacagct gtatgctacc acatttctga
      721 gctgctggat atttaaccat gtaatgaaag acttccctac aaacacattt tagccaggaa
      781 ggtccttctg tcgcacactc ttgcatattt cattaaacct gtaaagtaat ttaaaagatg
      841 caagacaaga acataaaaca aa
//
LOCUS       KCPA01003440             546 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 379183tic ultra-conserved element locus
            uce-1297, sequence.
ACCESSION   KCPA01003440
VERSION     KCPA01003440.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 546)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 546)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="379183tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>546
                     /note="ultra-conserved element locus uce-1297"
BASE COUNT          177 a          122 c           93 g          154 t
ORIGIN      
        1 tcaaaatgct aaataaacaa tacataatgc atccctcatc agccaaaacc atgagggctc
       61 tgtgctcaaa taacaggaaa catattcaat tttcctaaca gaagacagtt cattaagctg
      121 tgccacatca aataaaactt taatttctcc agcatcagag tcgcaatgaa agcaattgag
      181 gaagatgagc catatggtac ttctatcagc aaacacatat tgctcattcc cccaaagttt
      241 tctaattctg ctccccagac ctgtgtaata tagataatgt gctctgagcg cagcaaccat
      301 gagctatctg gtgtacactt ctaatactgt atttaatggg aaataatgaa tcataaaagc
      361 ctgcagaaga cggcttttgc taacctaaat ctcagctgta atttcattgt tctgtgccta
      421 agatgctgtt tgcccttttc aaacagcagc agttgaacat aattatgctg ctacaaacct
      481 gggctgcgaa agccttccta atagaaccaa gttgaaatcc tgagcttagc tgcctgtcag
      541 gtttta
//
LOCUS       KCPA01003441             524 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 379288tic ultra-conserved element locus
            uce-5689, sequence.
ACCESSION   KCPA01003441
VERSION     KCPA01003441.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 524)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 524)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="379288tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>524
                     /note="ultra-conserved element locus uce-5689"
BASE COUNT          163 a          126 c          121 g          114 t
ORIGIN      
        1 caacaccaag agccagcgag gcacggtgac aaaccagaca aagttccagt cccagtttag
       61 caaggaatcc tgaagccagg gtgcctgcac tgattggcaa aggcagcagc aaagcctcag
      121 cccagctctc tgacaagggc taacgcctcg ccggcacccc cgtgtaatta cacacttgag
      181 tgactggact ctgaagaaaa ttgaaggcct gagctgtgaa cagctgccat tttctctctc
      241 catcacgcca gcgtgattac ttgagaaatg aacagccccg gctcaaagct actccagaat
      301 tctcagagga aatatggctc cgtgttcaaa taatgagatt cttaaggcaa gcgttactta
      361 caatcacacc acacaccaaa aagggaaaaa aaggagagcc gggaagaaag aacgccggga
      421 tcctaacaaa tgagaattta agaaacccgt ttaagaaaat tatggcactt tttttgcttt
      481 ggagagttat ttcgtggatg gctactttgg atgtattttt gact
//
LOCUS       KCPA01003442             533 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 379394tic ultra-conserved element locus
            uce-2877, sequence.
ACCESSION   KCPA01003442
VERSION     KCPA01003442.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 533)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 533)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..533
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="379394tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>533
                     /note="ultra-conserved element locus uce-2877"
BASE COUNT          181 a           86 c           94 g          172 t
ORIGIN      
        1 aaaagacttc catcgttatt ttcagaatga agatatgcta cttcagagct ctgggattga
       61 acagtgttgt tgtattaccc ttttctttgg ccattgctgt gtactatttt tgttgttgtt
      121 ttcctcctct tcgtcaaagt ggcgaaaact ttgtgatcac tatcttgcac atggtggaag
      181 atgtctcagg aaagccgggt ttcccgagga gcaactccac accatttcat gtatttttaa
      241 aacccaactc ctagcactga agatattatt aaaaaacaaa aaaaaagaca gtaagaaaga
      301 agaaaatacc taatctaatg tgtagcagtt acatatttac caaataatgg actcaaaaga
      361 aatagatgtt tgaagagtgc tttatatatt aaaaaatcgc tttatgttta aaaaaagatc
      421 aatgtttttg attgttttga aaggaagaaa gacaatggaa taacatacac ttcaagtatg
      481 ttttaaaaat tatatgaaca ttgtgctccc tgcctgcttg gatcaggaaa ctt
//
LOCUS       KCPA01003443             760 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 379499tic ultra-conserved element locus
            uce-3376, sequence.
ACCESSION   KCPA01003443
VERSION     KCPA01003443.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 760)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 760)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..760
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="379499tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>760
                     /note="ultra-conserved element locus uce-3376"
BASE COUNT          236 a          163 c          114 g          247 t
ORIGIN      
        1 aagcagaaat cctatccaaa ttattctgaa ataaagaatg ctagtttagg cacataagaa
       61 atgtattgat tccacttgct tatgataact tacagctgtg atctcatgtt gttattttcc
      121 aagattctct gaaacatcta atgctagatt taagttacac aagattcttg tggctttcag
      181 caacaccaac ttagcaccca tgtcacaagc atttgtttac ttttttccat ttaacttacc
      241 tttcctcatg cagttaaatc atagcatgca ctgtatgctg atttcctctc atagttaatt
      301 tgtatcttta gaaaaaagct ataggaaggt attaatctgc ttaacatttc taagtacatc
      361 atccaaggga ttttgttttt ttaatcttac atatgctcag cagagttact ggcaaaaact
      421 gtacattttc tccatttcat cctttcaaca tcaaatggta agcagcaaaa attggatcag
      481 acttcaaaga ctgtgctgtg ctccaagtca cagagcgact cctccatttc acatattgaa
      541 ttcgagcagg atatcaaagt gctaccaaag aacctcaggt ccttactaaa aaagagtctc
      601 taacatctgt agaaagtgaa gtgcacagac aaatcacctc agggagcagc tagcatttat
      661 tctcagcagc aaatttccag ccttttgatt ctcttattca ctgtacctcc ctgtctctct
      721 acagaactaa agttcttagc aagcaggctt ttgtctcaaa
//
LOCUS       KCPA01003444             587 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 379609tic ultra-conserved element locus
            uce-5964, sequence.
ACCESSION   KCPA01003444
VERSION     KCPA01003444.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 587)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 587)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..587
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="379609tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>587
                     /note="ultra-conserved element locus uce-5964"
BASE COUNT          142 a          156 c          129 g          160 t
ORIGIN      
        1 atcagtttgc agtcccttcg tggagctctt gcgatccacg cgctccctga tggagaaccc
       61 cgggagaacc ggctctcccc caagtgccac atccaagtat ttcctatttg cctcttctcc
      121 aacctgttta gaaattacta gtagaggata agtaaattgc aagtaaacct agtgaattag
      181 gatgattctc tatcagttta atttatgttt tatagttagt ttagccttct gatttgattg
      241 ccttagtaat gtgaattgcc tacagctgct gatgatacag ctttaattct gttttaaagg
      301 tcatgtaaac atgtgcctgt agcataagga atgcaaattc aattcccttt taatgcttcc
      361 tcacattcac ttcacagcct tcacctagaa aattagcagg atttaatagg gaaccgagtg
      421 gctgttgtga ttccattaaa atcccctctc ccccccaggc gtggctctcc cgggccaccc
      481 catgcccgtg acgcggacac ggaggcgctt cccacgcccg ggcggaaatc gaggcgggac
      541 ggactcatcc cctcacctga gagctcccag agcgggaggc accggga
//
LOCUS       KCPA01003445             811 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 379718tic ultra-conserved element locus
            uce-1038, sequence.
ACCESSION   KCPA01003445
VERSION     KCPA01003445.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 811)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 811)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..811
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="379718tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>811
                     /note="ultra-conserved element locus uce-1038"
BASE COUNT          250 a          188 c          151 g          222 t
ORIGIN      
        1 ctgttcggag gtaccacctt tcctcacccc tgtataaatc caccatctgt gctcacacgc
       61 acacatgtgc cgtcgcgcag caaatgcgcc gagacccgac cgagcgcggg agccaaaaaa
      121 gcaccaggca cacaaaagct ccccaggctg ccccaggtct gcgggagcaa ggcggggaag
      181 aaaagatcct ttgctcattg cccaggtgag atagcctggt gcgtcctctc agcctcgaca
      241 cgcgtcaagt aaaagaaagg ttaaaattag aaaattcaat ttatttgata atttcccaga
      301 ataattagag ttaatatggg ttaattaata tgcaaatctc tcagcagatg ttctgcagca
      361 gggcctgtgt gagaaaacag cctttgcttt ctcctacgtg attttggctg tcagttattg
      421 ggtataatta ctgtaactaa ccgaatacac acaaaacctt tggaatataa aattgttaca
      481 gttctagttc tgcacaagct gctacttttc tgcaataaaa gcgaacaatt tctttcagaa
      541 aataggagcc tttttgttcc tttcttgatt taaaaagaag aaatgaatca agtaaatggc
      601 ttatcttttt tctatgcata attaggtcag tattatatga acattccaat gagcagtggt
      661 acaaacgtac atataaaatg atagctcaaa ccacctgcaa aatcacataa aattgtttta
      721 ttcagaatcc tttccttcat accagaactt tgaaatgctc catgcctctc ctgccaacac
      781 tgccaacatt tgcccaattc aaagggatcc t
//
LOCUS       KCPA01003446             670 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 379825tic ultra-conserved element locus
            uce-469, sequence.
ACCESSION   KCPA01003446
VERSION     KCPA01003446.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 670)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 670)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..670
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="379825tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>670
                     /note="ultra-conserved element locus uce-469"
BASE COUNT          222 a          112 c          153 g          183 t
ORIGIN      
        1 gcagatgcct gagaaatgga gtgcacccta aagaggatga gtgtaagtga aggaaacatg
       61 ccataaattc agaagatgtg ctacttagca atgagtcaaa gctgtaagga gggcaaaagt
      121 taattagggt actgtgctgc tgttcgtcag tggaaagtgg ccaccaccag aaacaagatg
      181 gctgctcagc agtgccctaa tgcagccaaa agatcatctc cttctctgca agggcttatg
      241 ggttagggga aatcatacac agatgattaa tttttttatg gttcacagac gatcaaagtg
      301 aaattcagca gctgttcagg acaagtgacc actctaacgg ctgtaatata acctgctaaa
      361 tagagaggga attgcatgag agcaagaggt tagctgtgat tatcggcagg tgagtgcttt
      421 attgaagttg aaagaccatt aacattgatg gagtaattat ttcaacttga aagtaattac
      481 cttgatgggt gataacttct ccagtgttct cagatttgat tggaccaaac aattgtgaac
      541 tcttgaagcc tagaaaaata ttacaacaat actgcaatgt ttaaattact gaaaccactg
      601 ttagagtatt ttaattatgc ctaacagtga aaagatttta atgtacaaca actggtgacc
      661 tctcatgtat
//
LOCUS       KCPA01003447             589 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 379935tic ultra-conserved element locus
            uce-14, sequence.
ACCESSION   KCPA01003447
VERSION     KCPA01003447.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 589)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 589)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="379935tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>589
                     /note="ultra-conserved element locus uce-14"
BASE COUNT          177 a          116 c          136 g          160 t
ORIGIN      
        1 ggacctgaaa ataacaaaaa atgctaaaca tcccaaaaca aacattcggc tgctgccaaa
       61 ttccacaaga agagagctgc aggccgagac agctctcgtc tcgctgggga ataacgggta
      121 aagtttggcc agctgcccct tccagccctt cggggaccca caatccaatt gcagtgtctt
      181 agcggatgtg aatttcaagg ttacacctgg gtgttcaagg gcagggccaa gtgtaatcgg
      241 cacttagatc atagattaat cttatttgcc atctattagg tttgattcct gcttcccgct
      301 ctccctccct aaagccagga ttattgtgat agtttaagat aatggattct aacggaagaa
      361 aggtcacgca ggcattgaga tttggaacct taagataata tgattaatct aaaagcttct
      421 ttctaaaagg ggagggtata ctctcatagg tttaattgag gggagagaga gggagggaat
      481 tagcaacatg aaaggaggag tgaaggatcc tacttttgtc aactgcaatt aattaacata
      541 gtgagggaac actcttcatt tccaagctga aaactgtttt ttttttttt
//
LOCUS       KCPA01003448             404 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 380047tic ultra-conserved element locus
            uce-6763, sequence.
ACCESSION   KCPA01003448
VERSION     KCPA01003448.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 404)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 404)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="380047tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>404
                     /note="ultra-conserved element locus uce-6763"
BASE COUNT          129 a           62 c           70 g          143 t
ORIGIN      
        1 ttagctgtca tagtagctac aaatgaacaa agataaaaaa atgtgaaact tactctattt
       61 cagttttttt cacctttttg tctatgcatg ttttaatata tgtccttttc aactgtctcc
      121 tacttgatta atctcaggct gtttttcagg aaaaaatgtt attacactga ctggaggagc
      181 aaaaccatgg gcaggttggt gggtgatgtg tagcttctag ttttgtcaga tagtcaccct
      241 gctaaagaaa agtaaattta tccatgaaac ttggaaaatt agattatttt cctgcaaact
      301 caaaatatgt cagctcaaag tgttaaaata ttcatctgta acaaggtgta gtactttaaa
      361 gctttgccag ttgtcatttt agaaatgtaa aaatgtttat gcca
//
LOCUS       KCPA01003449             565 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 380159tic ultra-conserved element locus
            uce-4438, sequence.
ACCESSION   KCPA01003449
VERSION     KCPA01003449.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 565)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 565)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..565
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="380159tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>565
                     /note="ultra-conserved element locus uce-4438"
BASE COUNT          170 a          104 c          108 g          183 t
ORIGIN      
        1 gcagtgtgtt tttgaacatt ctcagaagca tttactattt acttcaggaa acagcttaca
       61 agtcaaaaca cgctggagat tttcattttg ttttgcttca agctgccaat tgttagtcaa
      121 gattactatt cattttacag gagtgttaag aatgcaaatg gttaacagta gtataaacta
      181 tatacttggt ttaagtttga atgtctaaaa ctattacata ctgcattcat ctgcattccc
      241 tgtttatggg aatgaaatat gtagtcattt gaagtccaca atatgtatac tgtgtttgta
      301 ataactgcag attttacaag cacattattc tttccattag gattaaaacc tcaccgaata
      361 gcaatttgtg aaagaattct agcagggccc tgagcccaga actctgacct ctgatgagat
      421 gcttggcagc aacaaactct aggtctaagc aaaacatctg gtttgagtta gacttcctga
      481 aaaaatagcc cctgtactgg ggaaactggt attcactcag ctttgtctat acactttgac
      541 tgactgcaac actgttgcgg ggggg
//
LOCUS       KCPA01003450             488 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 380266tic ultra-conserved element locus
            uce-2036, sequence.
ACCESSION   KCPA01003450
VERSION     KCPA01003450.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 488)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 488)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..488
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="380266tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>488
                     /note="ultra-conserved element locus uce-2036"
BASE COUNT          155 a          119 c           80 g          134 t
ORIGIN      
        1 aaaaaaaagg cagaaggcct ctctatccac ctaatcacca tatcaatgac acatgccaca
       61 acagagaagc actagtttat ttgattgatc atggtagata aactccaaat aacagagaaa
      121 ttaacaaatg cttgacattt gctcaacatc cattattctg acactgcttt caggatttca
      181 aagcctggga gtatgcttaa tcaacattca tattccctag tgagctacag gcaccatatt
      241 gcgccccgcc ttagtactga tgaaaactgc atattggcca tttccaaaat gttctgggac
      301 tccacacagg gccccttctc tcccttgttc ctgttctgca gttttctttt aaacacttcc
      361 aagacaaaag catctgccag tttttctctc tagggatgta tgcaaaatga acttaacagt
      421 tttaaggcaa gagaaaccct cacatctaaa ttcattcata ggacagaaaa gggcctaaga
      481 ggcctctc
//
LOCUS       KCPA01003451             699 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 380377tic ultra-conserved element locus
            uce-6074, sequence.
ACCESSION   KCPA01003451
VERSION     KCPA01003451.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 699)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 699)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..699
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="380377tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>699
                     /note="ultra-conserved element locus uce-6074"
BASE COUNT          201 a          113 c          156 g          229 t
ORIGIN      
        1 agctttggaa tttagccttt aaaaagcagt gccgttcagt ggaaatgctg aagttctggg
       61 ttcattggta acgtgagctt ttgtctcctg gcagatttcc acaagacagc cccgtacgtg
      121 gtgactggga gtgtagatca aacagtaaaa gtgtgggagt gccgctgatg gagttcacac
      181 tttcctctgg atgcactcag ataccatggt tacccattga gctctgttta aataaatatt
      241 gtcctttcat gtaaattatt ctggatgtag attgagctta ttaaatgtta cacacaaagt
      301 attcatgcat ggtgaatcca aattgtatac tgtaaattta catacgttgt ctagaagtac
      361 cataggttta agaacatggg ctggcattgg tcacatcaga cctgagaagg cagaagaggg
      421 atgattggaa tagggcactt aactgaatag atgacagtgt cgttatgtcg gataattata
      481 cctgtttttc tttctgctgt ctgttggtgc ctgaattggt gacctcattt gggaaaagtt
      541 ttgtagggct ctttcagaaa tgtgtatcta tgtaacatca cttaagtgtg cttaataaat
      601 cttctctaag aatactagat aataaggctg caattcagaa tcttctgaac cttatatgta
      661 attaatggaa attaattaaa ctctggaata tttgtcatg
//
LOCUS       KCPA01003452             579 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 380488tic ultra-conserved element locus
            uce-8033, sequence.
ACCESSION   KCPA01003452
VERSION     KCPA01003452.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 579)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 579)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="380488tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>579
                     /note="ultra-conserved element locus uce-8033"
BASE COUNT          184 a          112 c          125 g          158 t
ORIGIN      
        1 aaattgctgt aggaacacga gattttaaac tcaaaaaata actcaacgtt gcccttttaa
       61 attgtttcca ctgacaacca gagtcacggt ggcatttgtt cctgcgcaca cacatgtatc
      121 cataatgatc catcgctcgg atggcacagt tcttctgtgc ttgctacctg tcaggcttgt
      181 actccagaac cttgaatatc agtgactcac taatgtttta tgatatttta cctcacttta
      241 tggtagtcat ttatgacagg accagaatga cataaactgc cataaagcaa agcaatgcaa
      301 tcacacaaat gaccataaat caagatagca acagaaaaag gtcataaaaa gggaagaaaa
      361 ttggagaaaa caacattttc ccgaagtctg gagttagcag cagcgaactt caggacagat
      421 ggatgtgagc aggcagagaa ttcagtgttc cactgatacc aatcattttg ggaggcactg
      481 acagtgatgc atggatgggc cttttaaggc tgtttgatgt ataaagagtt tattgcgagt
      541 gtgtgaatgg ggtcgaagtt atctgagctt tgtcctaca
//
LOCUS       KCPA01003453             343 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 380589tic ultra-conserved element locus
            uce-6445, sequence.
ACCESSION   KCPA01003453
VERSION     KCPA01003453.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 343)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 343)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="380589tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>343
                     /note="ultra-conserved element locus uce-6445"
BASE COUNT          116 a           62 c           72 g           93 t
ORIGIN      
        1 ggcctcacac gctgcctctt tttgtgacaa gtagcttgat ccaggctgat ctccactagc
       61 tgtttgaaga gtatttcagg actatttgca tcattttatc tctaatgtat aatatatggc
      121 tctaaagtga gcacaagtac tgtcttgtta ccaagcataa aaaagtaaga gcaataaaga
      181 tacattagtt ctctcaagca caacggctat aatgcaagca agaaaggttg ctacttagag
      241 ttaagaggta acctttctgc ctgactaaga caatggaaga gtaaagaaaa tgtcaaatca
      301 agaaaagctg gatttagaga tgaggcagcc cagaatgacg ttg
//
LOCUS       KCPA01003454             522 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 380699tic ultra-conserved element locus
            uce-3326, sequence.
ACCESSION   KCPA01003454
VERSION     KCPA01003454.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 522)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 522)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="380699tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>522
                     /note="ultra-conserved element locus uce-3326"
BASE COUNT          165 a          104 c           76 g          177 t
ORIGIN      
        1 actctgttca gctgaagtga gcactccagc gtgaactact gattcagtga tggcagaaga
       61 tctctttaat gcaagagtgc tctaatatat tatcattcct gatgatgcac cttctatcca
      121 gtaagtcttt ttcttcccta aaatatactg ttgttttgac acaaacagct tgctatactt
      181 aaggatttta ctaataaaac ataatgttgt gttagatatt acgactgttg ccacagctga
      241 actgccttgt caaatcaatc ctaatatggc tcccacaggc acataaaaac cttatttagc
      301 tatcagttat cctaatcact ttgttcagtt taagggtgca atacttcaag acccattcca
      361 atttatacat atatgcccag ccatttaata aagtcttgat ttatataata aattcttgtt
      421 tggtacttta aagcagcagt gttttatcaa gtgtgttaca tgtctcctca tacccctaaa
      481 taaatatgtt aatatacaca aacaggatac ttgcatgaaa aa
//
LOCUS       KCPA01003455             445 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 380805tic ultra-conserved element locus
            uce-5031, sequence.
ACCESSION   KCPA01003455
VERSION     KCPA01003455.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 445)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 445)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="380805tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>445
                     /note="ultra-conserved element locus uce-5031"
BASE COUNT          140 a           88 c           68 g          149 t
ORIGIN      
        1 acttagatat ggtctaagtg gctgaaaata tccatgaaat ggagatatac ctcttcattt
       61 aaaaacagaa cctttctcat gattacatta acacccaggc tgccgtggac acctgagaca
      121 tccttggtcc taagcagtgc agcctgaaga gcctgctagt caataaaata aaatacccat
      181 tctctttaat taacatatga aataaacaca atctgtgaca cctagtgtgc agcagcaatt
      241 aagaggcatt gcttagttaa acctcctaat acctcattta aatatgcaat taagggataa
      301 ttgccttcaa tcaattgaaa tgttttacct caattatttt ttgtgaagct ttctactttg
      361 tactttgtct ggcctaagtc ttcttatacc acttgttaaa gaaacattat tctttccagg
      421 attgcattga tttatggctt ttatt
//
LOCUS       KCPA01003456             832 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 380918tic ultra-conserved element locus
            uce-5313, sequence.
ACCESSION   KCPA01003456
VERSION     KCPA01003456.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 832)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 832)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..832
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="380918tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>832
                     /note="ultra-conserved element locus uce-5313"
BASE COUNT          242 a          126 c          194 g          270 t
ORIGIN      
        1 atttgcagca ttattgtagt caatcatgag aggattaatt gcagtttgct tctatcattt
       61 ttcttgacag ctgctgaaaa aaataatgtg gtagatttgg atttatactg actttcaagg
      121 aggagatatt tgttcaaaag cagtcaggga gtgcaaagat ccatgccaat attcagaatt
      181 cgtatttccc ttgaatggaa ggttgtgata aaatggtaca tggtgtgttt tcattgcctg
      241 ttgaaagact ttcatgcagt taaaataagc attttgatgg tggttgaatt aagagttttt
      301 gtcagtctct tctcatcatg gatgattaga ctaaaacgtc tgcttgtctt gacttgagat
      361 caccacagct tcagataaca tgctttgtga ttgaaggtcg aaatattttg aattctaata
      421 ggctgccaga tgaattgctt gaaatagact gtaaaatttc aaggcttcct tttccatctg
      481 ctgtgaaaag aaccattggg aatggttgag cttgatgatc atagaattac gggatggtga
      541 ttctaaaacc ctcaaaggga agttgctatg gagatctagt tccaaactgt gaaatgattc
      601 acctctgaaa ggcttcaggg tctgagaagc tgaacacatc attgttcagg tggtcattgg
      661 ttaggaaatt gctggtgcct gtgtaatcag cactcctgtg gtagttaacg atctaaaaag
      721 gtttgttctg aatgatgtgg gacaacagca atgtgcataa gatggcttct ctcaatcata
      781 gtttgctcag cctggtgctt gtaaaaatat agtgagctaa atggcaggga ga
//
LOCUS       KCPA01003457             654 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 381028tic ultra-conserved element locus
            uce-326, sequence.
ACCESSION   KCPA01003457
VERSION     KCPA01003457.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 654)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 654)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..654
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="381028tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>654
                     /note="ultra-conserved element locus uce-326"
BASE COUNT          244 a           95 c          108 g          207 t
ORIGIN      
        1 ataatttgta taaacatcct aacaaaattt taaagcgtat taaacaccct gttttataaa
       61 cataacactt aatttggaaa catttagaag gtaacgcatt taggataagt gcacaacaca
      121 tgaaaataat aaatgaaatt ttcccagttt agaaaatgaa tgtaattaat taacatttaa
      181 attacatttt taattgcaat cataccctcc caagggactc ataagggacc ataattgcaa
      241 ttaaaagcat gtggattaga taataaaaca atgcagagtg tctgaaatgt gcgatttaaa
      301 atggaaagca gacattgtta tcggcacatc taacttaatt gtagccataa agcaaatgtg
      361 ctgtacaaaa taaaattcac atacgggaac atttaattct tgaatctctt aaaggggaca
      421 cgcttgagag cacattttat gacaggttct gtttgaaacg gccctttaag gctttagtat
      481 tcagggatag tgctttaatg tttttgcatt aataaaagca tagctgaatg ttcctattaa
      541 aatacacaga tacatttaag taagagatga gaccgagtgc ctggaattta agttgcagaa
      601 agcataatta tatcaggaac acatttttct ttgttctgct ttgttttaaa attg
//
LOCUS       KCPA01003458             340 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 381131tic ultra-conserved element locus
            uce-3117, sequence.
ACCESSION   KCPA01003458
VERSION     KCPA01003458.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 340)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 340)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="381131tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>340
                     /note="ultra-conserved element locus uce-3117"
BASE COUNT          117 a           52 c           52 g          119 t
ORIGIN      
        1 tagtgataat tggcatttaa aacaaatttc catagctcta gaaacaggaa accaggtatc
       61 tctagaaatt gatgaacact tccaaaacat tgagaaaagt gtagtgaatc tttcaatgat
      121 tgattccatc atgattggcc ttattttttg agtaattgat gtttctttag ttcagtccgt
      181 tagtgcaaat aattattaat caatatgcac tcagctctta ctttagaaga taattttaac
      241 acatgattta ttctgaacat ttcaattgaa ctacctttac aaggagaaaa tcaattggct
      301 agtggtctaa agcactttaa ttatctgaag agctatattc
//
LOCUS       KCPA01003459             528 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 381241tic ultra-conserved element locus
            uce-5681, sequence.
ACCESSION   KCPA01003459
VERSION     KCPA01003459.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 528)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 528)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="381241tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>528
                     /note="ultra-conserved element locus uce-5681"
BASE COUNT          136 a          125 c          103 g          164 t
ORIGIN      
        1 aaaaatggga cacactctaa gccaggccta ctgagcactc tgcctttttg gcagatgggt
       61 tgtgctttcc ttggccaagg agaatttgtg cttttcagta gtcgggaaag ttgtttatta
      121 ttcaaccatc tcttccaaag caaggcaaac actgtttata agaagcttca aaagcctctg
      181 tcacagctat caaggctcta cactctgtgc ctttgccaag tcaaattagg ttattttact
      241 tgatattaag tttgacaagc caagagcctg tgaaaaccag aatcccaact gggcgtgcct
      301 cccacaactc actccatttt tgagggcata aattcctaca gtagccctat tcttcactct
      361 cttattgtct gtatttatct tgcctggaaa ttactgtgtc ctgggcatct tctaatattc
      421 agattctcta agaatgtgac caacgcaaac cggtctcggg gatgtctctg tgggctctgg
      481 cctccacaga tgataaattt attatcatgc taatttgcag gtccactg
//
LOCUS       KCPA01003460             601 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 381346tic ultra-conserved element locus
            uce-5713, sequence.
ACCESSION   KCPA01003460
VERSION     KCPA01003460.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 601)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 601)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="381346tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>601
                     /note="ultra-conserved element locus uce-5713"
BASE COUNT          125 a          176 c          143 g          157 t
ORIGIN      
        1 gatgagtcct ggctctgcag cctgaatagt cacaggcaag caggaaaggg gcaggggatg
       61 gcttggacct gtcctgaaac ccactgcctg cctgggcacc cagtggctcc acacttttcc
      121 atgctgttgg cactgccaaa gcgaaggggt ccaatggctg cactcccctg tgcctgcttt
      181 ctgtctgccc agatccgtct gcctttgtgc accttccctt gcaagcagca atttctgaca
      241 gctaatattt cacagaaacc agagccagct ctctccctcc tctctctctc ttctgtttat
      301 gaagctgagg gtaagtgttt aattagttgc ctaattgcct gggtaattgg tagacatact
      361 cagctctcca agtaatcagt ctgaacaggc cttgaaaata tctggcccaa tattcattag
      421 tgcagttaaa tcgttaaaca gttactgtgt ttggttcccg acaaagcccg gctgtgctgg
      481 ctgcagctct cccgggacac cccccaggga aagctgctca gggaaaaccc tctgtcccct
      541 aggcagggtg gcaatgggag atgcctcctt ttctctgctt gacctcttgc tccagcctcc
      601 c
//
LOCUS       KCPA01003461             519 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 381456tic ultra-conserved element locus
            uce-1044, sequence.
ACCESSION   KCPA01003461
VERSION     KCPA01003461.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 519)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 519)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="381456tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>519
                     /note="ultra-conserved element locus uce-1044"
BASE COUNT          149 a          100 c           88 g          182 t
ORIGIN      
        1 tcttcttccc tagtacagtg aagcagattt ctgaatgagg ctgatgagat ttgtaatata
       61 ccccaagtta atttagacag caggttagcc cctcaacaaa actgtggccc atatacaagt
      121 caaatctgct tttttctttg ggcaatgatt tatttccctc ttaaattggc tggaccagtt
      181 agttttttat ttttattaag tcacactatt cttaaatgaa actattgatt taaagtcagc
      241 ttagtgagga tttaatttgt tttcagggga ttagagcagg taacatggga taattttaca
      301 ataaagtgga atagaagcat tccttcacat taccctcacc tttttttctt gccaggctgc
      361 acagacatta caaattttca agtgaattgt ggaaatacat tcataaatca ggcctaattc
      421 ctctgcctgc ttaaaggcta ttctaaagaa tattttcctt tgaccttgtc catgtttgtc
      481 cttccatggg ctggtgcatc tgataattcc acacaaaca
//
LOCUS       KCPA01003462             505 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 381565tic ultra-conserved element locus
            uce-3664, sequence.
ACCESSION   KCPA01003462
VERSION     KCPA01003462.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 505)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 505)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="381565tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>505
                     /note="ultra-conserved element locus uce-3664"
BASE COUNT          154 a           92 c          108 g          151 t
ORIGIN      
        1 aaagtaacgt cttgctgtct gcggcgagta caaacaggac cccctaatgg cagccatttt
       61 tatttgtttc ttaagatcca aaggctgctg aaagaacaat tggataaagt tgaggattgg
      121 agaagcttga ttttcttgtt ccagtgaaat gaaactcccg tccttttttt tcttcccctt
      181 tcccttaaaa gccggagtca gctagggggt tgtagctgtg tcaaagccgt tgggatgcca
      241 ctgctgatca ctttaattac taggactaag gaggataaaa ttaaaagtag caccattgaa
      301 gcagtggaag aaagcttgcc gagatgtcag tgaactgtga aatataaaaa ttgcatacca
      361 atacattttt ataggaaaca aggaattaca ttacttattc tcgaagagtt tgtccttaaa
      421 tttttcctca ctgtgcatct gcatggcaga tctttaaagg ggcaaataac aaagaaaact
      481 gtaatgtctc tttggcatgt cagat
//
LOCUS       KCPA01003463             812 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 381676tic ultra-conserved element locus
            uce-5092, sequence.
ACCESSION   KCPA01003463
VERSION     KCPA01003463.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 812)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 812)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..812
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="381676tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>812
                     /note="ultra-conserved element locus uce-5092"
BASE COUNT          247 a          158 c          157 g          250 t
ORIGIN      
        1 tagcaaatta ccctgtaaac agcccacaag agctggtctg taattgaatt gtaactgttg
       61 actttagaca tttggtatat ttgctgcaag aagtaaattt tcaaaacttc atcttgatgc
      121 agtcagacaa aatgaaaggt aatattcttt atctgcctca gattgctgca gatgaactgc
      181 tttcatatga gcttaaataa gatttagtgt attccatcct tcagctggcc acaattgaaa
      241 gtgatcagga tcaatatagc tgcccctgaa tgcagcccag tattgtgcat tacaatagag
      301 gaaatggctg tattcaaaat tttcctgtgt caaattaatt tccatgttat ctccaaattc
      361 aattagatgg gaaccccgtg taactaaaaa agtgtccgac atcccttagt gacaaattac
      421 ggtgcttagt gtgcatatca aggtgaagtg ttgagccttg ctaatcttct cactaattct
      481 caattaccgt aaaatgaagc cataaatcac acagacaggg gatcgatgga aatgttgttt
      541 tcagggtgat tggcagcctc cccaaaggtt ttctgtaagt tggtttaagg ttaccattct
      601 ctaaggggag ggatgaggta gtcttgctca atctctatga tataggccca caggcctttt
      661 ggggatagtg gggagggaca gcaccaattt cagcccatca gacatccaat ttttctcctt
      721 ttcatacctg ctgtagtaaa tgagaaacaa attaaatttc actccactat ctccacagaa
      781 accatttaaa tttttcatgg aaactaaatt gt
//
LOCUS       KCPA01003464             666 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 381787tic ultra-conserved element locus
            uce-1563, sequence.
ACCESSION   KCPA01003464
VERSION     KCPA01003464.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 666)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 666)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="381787tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>666
                     /note="ultra-conserved element locus uce-1563"
BASE COUNT          153 a          146 c          175 g          192 t
ORIGIN      
        1 ttccctaacc ggaagctggg cttgggagga agttgctttg cagctttggg gaacagggag
       61 ggaggagcag caaagttgct tgacaatctg ctgtcccaca agtatttttt ccatttcctg
      121 gtaggtggat taaaagccgg ttaacgagct cagaagctgc atgcgcgctc ttcacaggaa
      181 gtatccattg caatttttgc caagttatct gaaacccctg cttgaaccct tggtctgccc
      241 ctaatactgt tcatcatcct gttttgtgtc acaacaccct gctaccttga ttcactcttc
      301 gtcgttggct aggttttgga tttattactt tcgaggacga acaatcagtg gaccaggctg
      361 tcaacatgca ttttcacgac atcatgggca aaaaagtgtg tagttgtagt tttattttac
      421 cttaagaaag aaccaagtct tgggcaacga gcgattgcac tctttatcca tggaggtggg
      481 gaaagtcggg gcagccttgt gggctctgcg aggccttgtg tgtacagacc tggggtggct
      541 gagcacactg ggatgaactg gtgctcatcc gctttgagca cggtgcaagg agattttcag
      601 ctgttggaat cccagtgaaa tccgagttgt tcaaggcttg gtttaagata ccactccttc
      661 agatgt
//
LOCUS       KCPA01003465             693 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 381884tic ultra-conserved element locus
            uce-2149, sequence.
ACCESSION   KCPA01003465
VERSION     KCPA01003465.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 693)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 693)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="381884tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>693
                     /note="ultra-conserved element locus uce-2149"
BASE COUNT          212 a          130 c          130 g          221 t
ORIGIN      
        1 tctgcataaa ataaagagag aaaataaaat tccagcagct acaagctggc aacattatac
       61 tgtcataatc cagaaatgaa cattgattct gaagaagtcg cttcttcaaa ctttaacgca
      121 acaattaagt attccattgt catggctcaa ttaaatggta tggcctgaga aaattgggga
      181 ttgtaaagtg aggatggaat gtgctttgat cctctttcca gggttattgt ttcattaata
      241 aatgaacatg tcatttgtct caccagaggg agctcctgcc ctccaggctt tttccctttt
      301 ttgttcaggt tttataaaga tgaatttcca gtgctctgaa ataccatgga ttagtagtta
      361 agcctgacag cacttcgggg agtagtgggc ttaaagtgcc tcacacaggt ctccaaagca
      421 cttgtttact aatagaggaa atcagcgacc gtctgcagct gctgatatcg cattaccatt
      481 tggaaagaca gtagctgaga taacaaatca cacagtttta ataattactc ctgcattcca
      541 gttttttgtt tcctgcgtaa ctgcaaaggc tggatttctt ccaaataaac agataaaaac
      601 agtatggaac ttttatcttt taatgataat gacaacacat catgtttcgc taaaagtttc
      661 ctgctgaatt tttttctgat ttctagagtt tca
//
LOCUS       KCPA01003466             358 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 381988tic ultra-conserved element locus
            uce-4011, sequence.
ACCESSION   KCPA01003466
VERSION     KCPA01003466.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 358)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 358)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="381988tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>358
                     /note="ultra-conserved element locus uce-4011"
BASE COUNT          117 a           61 c           59 g          121 t
ORIGIN      
        1 ttggaccttt aattgctaat ctttttactt tttaaaacat tgaccagaat ataactttta
       61 cagcctctgt cttgtcatta ataatcagaa atgttgaata cagaagggca agttaaatcc
      121 tgtcattgaa acagcaaaca gctttagtca aatgtattgg cacagaatta aaaatgcatc
      181 aagcatgtat ttgtcttctc gatgggaagc ccttattaat agtttgaaga gtagaaagct
      241 tagccttatg caataagcac tgtagtagaa atatatttta atgtgtgaaa ttgcaggatg
      301 ccaaggttgc cattaaagct cctctctatt ccagtaattt tcccacttag attcattc
//
LOCUS       KCPA01003467             680 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 382100tic ultra-conserved element locus
            uce-395, sequence.
ACCESSION   KCPA01003467
VERSION     KCPA01003467.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 680)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 680)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..680
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="382100tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>680
                     /note="ultra-conserved element locus uce-395"
BASE COUNT          188 a          117 c          162 g          213 t
ORIGIN      
        1 ggttaaggat tagtaccagc atttcttttc tgtgtatcag agctgcttag cagtaattaa
       61 ttaggacatt gggttttgta ctcttggttc aggtcatttg cctatgagca gctcaagcct
      121 tttacaaagg cacgctgcat atgtttctgg gtaccttttt gagagaagat ttaaattggc
      181 cagatgaata atactttgct acaagtgttt tgccctaggc aaaaaaggtt ttcttcatat
      241 tatcatcgcc tggagctgga atcctcaagc ttgatgtgac tggtgttata ctgtcacatg
      301 gcaatgatgt aagaacagga gctctctgtg tcagacaaat ctggatttag gggaattata
      361 gcagatgttg caaaatggca acagtttagc aagttccttt catcccttgg ttgggaggca
      421 ggtccacgaa gtacacccag acagagaaga atgttatctt tgatcccccg gggcgaggag
      481 actccacccg atgagggatg caacgaggct ggaaataaaa ttaaatttat tctcgtggca
      541 gtatggaaat tggccattat ttattcatgc tgtttgccca gacatgtata aaagattttt
      601 tgtgtattgt gcgctataaa cagattagga cactcagtat taagattaat ggcacggaat
      661 ttgtgtgtgg ttagattaca
//
LOCUS       KCPA01003468             542 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 382207tic ultra-conserved element locus
            uce-3018, sequence.
ACCESSION   KCPA01003468
VERSION     KCPA01003468.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 542)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 542)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="382207tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>542
                     /note="ultra-conserved element locus uce-3018"
BASE COUNT          163 a           97 c           99 g          183 t
ORIGIN      
        1 aatggaaaag gaggtgaatc tatttatggt ggctatttta aaggtaagag catgtctttg
       61 cagattcttt gttcagttct gagataaaca agccttgatt cccttaatga aaacaggtcc
      121 actcatagat caccttttgc atgaaactaa tgttgcatga gaattccttt tatatgcatg
      181 actttcggat agttaatatt taacaaattg acaattaatt aaggctaaca taattggtct
      241 ttcagcatgg aggctaggca actttattca tgaataaact cctatcttcc tgcctaaaac
      301 tgtcaacata ttcttttgtt tatagagaat gtggtctttt gcaaaatgaa aaggtaagag
      361 acaaaagctc agtaacacaa attcaaactc tgttcccttg tcccctccct atatatagac
      421 aactgctaag tccctttgta gatggatatc tgtgttgctt ggagaaatga agagttctgt
      481 ggggttaatg actttaaaca gtgaatgtcc cttttcctcc ctttccctgc tcaaggtttg
      541 ta
//
LOCUS       KCPA01003469             718 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 382317tic ultra-conserved element locus
            uce-1051, sequence.
ACCESSION   KCPA01003469
VERSION     KCPA01003469.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 718)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 718)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..718
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="382317tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>718
                     /note="ultra-conserved element locus uce-1051"
BASE COUNT          237 a          115 c          166 g          200 t
ORIGIN      
        1 caataaagtg cacctgtaaa gcagaagctt tactgttctc gattctgttc taattatcaa
       61 gccttagagc aaaaactagg tttcaaagaa aactttctgt acgggcctca atagagttaa
      121 aggagaaaca ttttaagttg atgagctgac acttgtagaa gcaaatatat taaataaatc
      181 atgattcgtt ttggggctaa atctgactta catcaactct ggaaaaacta gatcctaatg
      241 agtgacagtt tggtgttttc tgtcacttcc tacagtaatg gccccaagct gacactgctc
      301 tgtgggagtc taatacttct gaacaaaagt ttttttggag tgagatagac aaggtagaaa
      361 tcccaaggtg actggaagga atgtctaatg actggaaaga catatttact ggcagactgt
      421 atgtaagctg tgacagttga cagggcttga ttgtaataaa tatagttgat gaagagaagg
      481 ctgacaggtg aggacagaga gagaaaaaga gtcaaaagat ctgcattggc tgaaccctat
      541 taagggtaag ttggtaacaa agcccagagt catgaaagaa aacaggaatc gcaaactgat
      601 gtctaaacag tgaaatgtgc aggacttgca ggttactgta acaagctcag atttgttgac
      661 ctttcttcta gcgattttgt aagtgtgttt tcagttcagc aggcaggcac ctgatatt
//
LOCUS       KCPA01003470             453 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 382426tic ultra-conserved element locus
            uce-4280, sequence.
ACCESSION   KCPA01003470
VERSION     KCPA01003470.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 453)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 453)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="382426tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>453
                     /note="ultra-conserved element locus uce-4280"
BASE COUNT          130 a           80 c           97 g          146 t
ORIGIN      
        1 taagcagcaa ttcacaagca ttgcagagca ccatctactg ctaataaaga gaatgcgtta
       61 aggcttcaag gttaatggaa atgtagccaa taaatgctga ttttttttta aggctgcacc
      121 gaattattga cattgttagt gcagctgcct ttgttttgat ttggagttat tgttcagtgt
      181 agctgagaga gtgaactgag acactgacag tgtggagaga tatcaagtga gctatttgag
      241 ctgcttatca attgttaatt gtctactgat ccttaaacca gatacctaaa ctgaaaagac
      301 cactttcagc aacacatgca aattatatgg atcctgtagg tgtgcaagcc ctacaactta
      361 agtgctaaat ttttttttgt agctttccta tctgggcagg tgtgggcctc caaacttaaa
      421 gttgctctga attcatttgt cagctgcatg ttg
//
LOCUS       KCPA01003471             595 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 382530tic ultra-conserved element locus
            uce-5903, sequence.
ACCESSION   KCPA01003471
VERSION     KCPA01003471.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 595)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 595)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="382530tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>595
                     /note="ultra-conserved element locus uce-5903"
BASE COUNT          168 a          126 c          115 g          186 t
ORIGIN      
        1 ttactgtcct aaaaagcata tgtaatatgc agagggaaaa cctgcttaca cagagcacac
       61 atatttctgg gcatctccat agtgagcaga gggaggatgt tcaattagtc tctttaccac
      121 aagctcccca gttagtctcc ctctggaaaa taggtgagaa attcttatat tcctctcaat
      181 atgttaatca gacaactggt atcacagttc tctaactgtg taataccagt cccccttggc
      241 agatatattt tatttggata atgatgtgaa atttaagatc tacgtttcaa ttgtagagag
      301 ccataggcag ttgtcaattt tagtgacaga catgaacctg gagctaaatt cctgagcaca
      361 agcaaaaatt ccaacaggcg tagagcaatt ctggtccctt aatagaaata cgttttctcc
      421 cattgagggg cagtattttt aaactgcgtg ttgcttctcc tagtgctgca aatcccaaat
      481 gttcccagat gcttcctttt atctggacag tttggtggcc tcagctacca aagaatttcc
      541 tgtgaaatct aatggttatc tttttcctgc ctaaagtggc cattgctttg gtacc
//
LOCUS       KCPA01003472             709 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 382643tic ultra-conserved element locus
            uce-4673, sequence.
ACCESSION   KCPA01003472
VERSION     KCPA01003472.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 709)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 709)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="382643tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>709
                     /note="ultra-conserved element locus uce-4673"
BASE COUNT          202 a          162 c          141 g          204 t
ORIGIN      
        1 tgtgtttcat caccacttct cttgtgctat gcaccagttt tcactgccat taaaaaggca
       61 actagtattt gtacagaact cagcaaataa aaatgggtcc ctgataaaag gtgtgtcctt
      121 tctagtaaag cacaaaaaaa tcttaatctt tggtccagaa gcagtagatt gccacaaaca
      181 gtcggcagct aaaatcatta atctttgctg cttgcccaac tggtactagt agtaaagaag
      241 ataatacact agcagaatca gtgacccact acaaattggt cttgaaaggt ccaccagcct
      301 aaatagactt ttgctgatcc aacacttgtt aggaatccca acaaagagac tattggctca
      361 tctgatgagc cgctcactat tgggcctttt gcaatggctg gtgatggatg accataccct
      421 ctttgagggg gaagatgcag ctcctggtat ggggcctttt ctcatcttaa atttgtactc
      481 aataaatcac aggtgcagaa gagacagcat cagtttcatt acacctacat gctccagtat
      541 caatcatgcc aacacaacgg gctgcgtaca gttcatttcg ggaggctctt tctgttccaa
      601 taccatttcc attccgttgt gctttagcat tcctaaagtg ttgaacctct gcagcggatg
      661 ggatgtgctg taattgcact ccttcgacac gagacattca gtttatgat
//
LOCUS       KCPA01003473             640 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 382750tic ultra-conserved element locus
            uce-7321, sequence.
ACCESSION   KCPA01003473
VERSION     KCPA01003473.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 640)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 640)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..640
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="382750tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>640
                     /note="ultra-conserved element locus uce-7321"
BASE COUNT          199 a          129 c          108 g          204 t
ORIGIN      
        1 cgctctaatc ccctattcag tctcaatctc attaacatac caggcttaat tggcatttca
       61 tccctgcatt gtgtctccaa aatgaacaag gtgtaattat gttaaaaaga gcacttcaac
      121 ggttttagtt taattcatgt cattcatccg cgtcagaatg aacgcagatg ttctattgcg
      181 ggatacagca agagatgagc agctttgaaa ccacacttct gagttgaaaa ctttatgtta
      241 aagaagttat ttaagtgaaa acacagtatt ttcttccttt gtttccgtgg ctatacaaca
      301 ttaactttca aaagctggtt ctgcttaatt tgatttttca ttttcaaatg aacagctgtg
      361 tttaagtcta aaagcccttt gtttaaacat acagagcccc agaaaaggtt tgaacaaagc
      421 atctttctgt aaacacttga ttaccaggaa aggcctggct tccaaagtgt ggttttgctc
      481 taggttctct tttaaagaaa aacaattgca tcacttctca gatgtcaaac aacaaaagca
      541 acaaatgtct tactaattgc atgagcttct tgtagtcaag gtaaatgagg gaagacagaa
      601 aaggattttc caaatggcca tcttccatcc ttttctcccc
//
LOCUS       KCPA01003474             726 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 382858tic ultra-conserved element locus
            uce-6238, sequence.
ACCESSION   KCPA01003474
VERSION     KCPA01003474.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 726)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 726)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..726
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="382858tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>726
                     /note="ultra-conserved element locus uce-6238"
BASE COUNT          186 a          141 c          134 g          265 t
ORIGIN      
        1 attattcatg ttgcattagc atatgcgctg tttatttccc taattgtaac aagcacttaa
       61 ttaattacac tataacctct tgaatctata ggccaactgt tgcatcttta gttaatattt
      121 taaagtctca tctttttttt ttctgtatgt ctttgatgct ttgtttctta tccttcttgt
      181 ttgggttctc tgtggaatag tctcagaata attctgcagt tctcttttat ggctgaaact
      241 ttgcatttta acagttgtct ggagatagtt tcttccttgt gaaatatcag ttttaataac
      301 aagaaaagaa aaatgccata aatctgcact aactacataa agctgaagtc tctgagagac
      361 tgattaacat tgagactcta cacaggtttt tcaataatta gaggatgtgc ttgcatggag
      421 ccatgactgc tctggccttg atgccgtttc ccagggcagg cagcaattat tatagcccac
      481 agtaaacttc ctacgctcat tgcctccagc cactgaagat ctttttggag taaagggctc
      541 ttaatttttt cttctcatca gcttggatta gcaacatttt ctacttattt tcttcagttg
      601 ttttaaattg acagctgctt ttctgctgca tgaggttgaa gggatctgat cacagcagtc
      661 ctggagtttt ggcagggcag ccagaaccaa actgttatca ctggctttgg gctcaagtga
      721 gtaacc
//
LOCUS       KCPA01003475             730 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 382970tic ultra-conserved element locus
            uce-2830, sequence.
ACCESSION   KCPA01003475
VERSION     KCPA01003475.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 730)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 730)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..730
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="382970tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>730
                     /note="ultra-conserved element locus uce-2830"
BASE COUNT          263 a          127 c          151 g          189 t
ORIGIN      
        1 atagtgccat tgcaaaacaa gaaatgcttc atattagtaa atgtacatgg aaacgaatat
       61 aagaccaaag tgtcaccaag atgaaaaata atttttaagg ccaaatctgt cccatataac
      121 accttttctc tttgggaatt actgtaagaa taagcatggt tgacatcaca aaatgtaata
      181 agtttgcatg catgctgaat gtgtttaaaa cacattacaa agcacaaaca catgggttta
      241 agtcaggcat aatccaatca tgataaagct ttttgcctga cctttataga acttactctg
      301 ataggaagta cggatccgtt tcgttaaatc tggataaaag ttagacaggc cacgcatgca
      361 aaagttgtct ttggaacatg ccagtacacc agcatcagca gcaggcagag gaaagagaga
      421 aaaaacagtc taaagtgaaa ggaagtgatc ataaccagca tctagaacag ccaaggtgaa
      481 gaaatttcag cagatgctta ccttccaatt gggagatata acaaaaataa tcaaagtaaa
      541 ggatgtggga tggatggtga gaaagcagct gaggcttttt tagatgcata gtttctatga
      601 gcaatctaga agttgcagtc cttcttagtt ttatccccag tgggctccat tctggcagca
      661 ctagatagct ggaatgataa atgattggcc tagacgacag agaaaaaccc tctgtgatac
      721 attgctaata
//
LOCUS       KCPA01003476             654 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 383081tic ultra-conserved element locus
            uce-4173, sequence.
ACCESSION   KCPA01003476
VERSION     KCPA01003476.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 654)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 654)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..654
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="383081tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>654
                     /note="ultra-conserved element locus uce-4173"
BASE COUNT          191 a          131 c          112 g          220 t
ORIGIN      
        1 actagtcctc atcttcatgt ttgaattaaa ataaatcctt ccttttaagc ccctaatgga
       61 atggaagaag caaatctggt tccctatgcc attatgaatt tcagagtcta ttcttgctga
      121 tgaaatttgt atgctgtatt tgaacaaact gtcatgctaa tgacattcct cagtctgctg
      181 tcttcaataa taagcaaact gagtttttaa atgtagttga tgggattttt tctctctcag
      241 acaccctatg aggaaaacca gaatttccca tttactttca tgacctctga tttaaaagca
      301 aagattgcac attatttact agtggatgat tttcctgaaa tttaatgagg actaagtaca
      361 aatatgacag aagtaattat cacagtttta ttctgcacag tcagggtctc cttgtgctgt
      421 aattgcaagc ctttcattca gctgccgata ccagagttat tatcatagta ctttatgtta
      481 tttcagagag gagagaaaca gatttctacc tcacttttac cctgcagatt tatcctaagg
      541 actcattttg cctggcctca cactcctgca aaataaggga agaacctgga ctaaatcttt
      601 cctgattctc tttacccatt cccagctgca gtgaggacag aggtattgag gtat
//
LOCUS       KCPA01003477             261 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 383184tic ultra-conserved element locus
            uce-4935, sequence.
ACCESSION   KCPA01003477
VERSION     KCPA01003477.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 261)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 261)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="383184tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>261
                     /note="ultra-conserved element locus uce-4935"
BASE COUNT           58 a           64 c           62 g           77 t
ORIGIN      
        1 tttctgttta gccctaaaga agaataatat cactaaattt cccaatgttc actcgagggt
       61 aaggatttct tctagcacag ccgtggtgga ggattcccag agctggcaag catcactttt
      121 tacttggctt cctcctctct ctctgtgcca ggcagctggt ggtagatgtg gctgagctaa
      181 tactggtgag acccagatcc ttgattttca cctctggagg tgcagggcca caggatgttc
      241 catcatcaca gttttggcca c
//
LOCUS       KCPA01003478             717 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 383292tic ultra-conserved element locus
            uce-374, sequence.
ACCESSION   KCPA01003478
VERSION     KCPA01003478.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 717)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 717)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..717
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="383292tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>717
                     /note="ultra-conserved element locus uce-374"
BASE COUNT          212 a          143 c          125 g          237 t
ORIGIN      
        1 aaaaaaccaa ctccctttgc taaatcaacc tcagtttcaa tatgaatcat caaatttaat
       61 attgccatga tcagtattca tggaaaataa atgatgccaa atatgcttta agaaaaaaga
      121 aatctgttta aatggtatta atggtaaggc atactacagc aaggtgaaca acactgataa
      181 tattaaatta acccaagagg ctccctaatc aggatcccta tgcagaaatc tgcttgccaa
      241 ctgtcgttct ttttcccatt ggtttagtta agggttgaag ttcttcttga agtttctttt
      301 ttaatcatta gatcccgacc ttacagtttt ctctgactac tttccttcag gctgtctttg
      361 ctcctgtcaa tttaggattt ccagggaatt attcttcttt gaaatgcata ttccaggctt
      421 gaaatactgg catatgtaca ctgtagagta attgtggagg ccaaatgttt aattacacat
      481 gacagctgga gctgtaggag tccgaggcat gcttgaaaac aacttatgcc ctatgcagtc
      541 ttaacgaaaa ggaacaaaat aatatatatt taggttttgt gccacatggt agccgctgtt
      601 ctctctcttt tcacaactga gggtggtttg caagaagttc agctgctttc acttctgtgt
      661 actgtctctc tgaatatata ccctccttct tacagtctag gcacaaactt ttagacc
//
LOCUS       KCPA01003479             694 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 383404tic ultra-conserved element locus
            uce-3786, sequence.
ACCESSION   KCPA01003479
VERSION     KCPA01003479.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 694)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 694)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..694
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="383404tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>694
                     /note="ultra-conserved element locus uce-3786"
BASE COUNT          168 a          157 c          175 g          194 t
ORIGIN      
        1 gcagagaggc agatagtttt tgactgaaat tttgtgagcc ccaaaatagt gctctgagtg
       61 tttaatgctt ttctccatta gacagcaaat tagccctagg ctcacaaacc aaatgaagtt
      121 tcatctcgac gatcggagcc tgctcaccag gcagttttat cccaagttcc tgcacgctgg
      181 ttggtcagtg aaatggagac tgcaacttct atttattggt gcaatacagt atttgatact
      241 gctaattaca cttaattagt ccttccacca tttaattaaa atggcttcta atgattgtgc
      301 ttctttggca ggctctttgg taccaccggg aattgtgctg cctgcagtaa actgatccct
      361 gcctttgaga tggtgatgag ggccagagat aatgtttacc atttggactg ctttgcctgt
      421 cagctctgca accagcggtg aggacgcagt tattgtacac acagactaat ttataccgaa
      481 acgtttgatg cacgcggggc tcgcagcctg gtgggctggg gctccaggct gacctgggca
      541 cctgtagccc ttttactgca aatccccttg gagctggtgg gagttggagg ggcaaggggg
      601 aggacacatg cagctgctgc tgaataaaac aaactgctcc taccctcttt gcagagggcg
      661 atggagaatg gacttcctct gaaactgacg ttat
//
LOCUS       KCPA01003480             593 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 383515tic ultra-conserved element locus
            uce-7456, sequence.
ACCESSION   KCPA01003480
VERSION     KCPA01003480.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 593)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 593)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..593
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="383515tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>593
                     /note="ultra-conserved element locus uce-7456"
BASE COUNT          183 a          120 c          130 g          160 t
ORIGIN      
        1 aaaaaaaaca actgctttag ctgagctggg aagagaggtt gtgcatgcag tcaaagccat
       61 aaacgctagc cttggtctga aaaaaggtaa ttgtgctgcg aatgctgaca ggtctgacag
      121 aaagtgtctt cattgagaaa ttgcattttg aagttcttcc cgttccttca gaaataaatg
      181 gactaaagca acagggctgg ctctgacagg aagcggggat tcgggacttc aaatacaaac
      241 attatgaaaa acaagcaaca tctgcaaaca gtaagtactt atttatattt tatggagtgt
      301 gtgcttggga ttttgacagg tttttaaaca gaacctatat taggcccata caaaggcgag
      361 aatgtccctt tttaaaaata cattatgctg ctgaaaagca gtctaagtcc gcagtccaag
      421 cctcaggtga gctctgaccc ctcctaacct ggtctaacaa aacacacatg tggtgcttgc
      481 aatagaacag tttactgcta ctttctcaag gtcaggacaa gacagacact tgagggttag
      541 tattcagcaa gcttttccct cagctgccag agtggctttg aacttttccc ttt
//
LOCUS       KCPA01003481             448 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 383626tic ultra-conserved element locus
            uce-3157, sequence.
ACCESSION   KCPA01003481
VERSION     KCPA01003481.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 448)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 448)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="383626tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>448
                     /note="ultra-conserved element locus uce-3157"
BASE COUNT          140 a           79 c           90 g          139 t
ORIGIN      
        1 gtctttgtat gtagaatctg ctgggtgcta atttgacatg gcaatgagat gaaagttgga
       61 ttcatgctag tttcaacatc agaggattgg aatgcagcct acttagcata gaagtcaaac
      121 aattcactgg caatagattg ctttccactt ctagatctgc taagtaaata gaaaactaat
      181 taacagtgta gtatggcaga tgtagcaggc tagaatttca ttagagcact ggctgagaac
      241 tgaaaggatc acgaagtcat tatatgtcct agagtgtgat gaatttttct tactgtcctt
      301 tccatggggc agacaagata ctatttgtgt gccccctgca taaaaatttc ctgataaaaa
      361 gtcaaagtat aagccctaga aattacattt cccaaaaaat agctttggtt ctaacagcag
      421 catcacattt ctttgccttg tgcatttt
//
LOCUS       KCPA01003482             588 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 383733tic ultra-conserved element locus
            uce-6548, sequence.
ACCESSION   KCPA01003482
VERSION     KCPA01003482.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 588)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 588)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..588
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="383733tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>588
                     /note="ultra-conserved element locus uce-6548"
BASE COUNT          173 a           91 c          112 g          212 t
ORIGIN      
        1 aaaatggaag aatggctgtg atttgcttgg catgggaagt tttgcagctt agttaaaatc
       61 aagtccagat taataattac aaaatgattc tttaactgaa ggggagggct gaatcatggg
      121 aagtgcagtt tccatgaaga ggtgcaggaa gatggtcact gtttcctttt ttttgtattc
      181 tactgctttg aattgttttc tgtttcttca ttgcatttgc atccatttat tccagcagga
      241 ttctcatttg cacccattct aatagtgctg ctgatctcta cataaaggat tatttacatc
      301 catatgtaga agcaggcaat ccccaggcaa gacctctcag gtatttttta aggcttttta
      361 cgtatctata aaatactgtt cttaagaaaa ggtgtcacca gcagtgcgcc taaaaggaat
      421 gtgaaatatt gtttttcggt catttgttaa ataaaaataa agacatcctt ttttaagctt
      481 tggttattct gttgataaat gtgtcttttc tattgagcaa gcttttggta tgctcctcta
      541 aaagctacta tgataaaata aaatagactg tattttaatt tctgaaaa
//
LOCUS       KCPA01003483             505 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 383843tic ultra-conserved element locus
            uce-4820, sequence.
ACCESSION   KCPA01003483
VERSION     KCPA01003483.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 505)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 505)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="383843tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>505
                     /note="ultra-conserved element locus uce-4820"
BASE COUNT          133 a          135 c          108 g          129 t
ORIGIN      
        1 ggaaattaag tttaaaatca tgagccaaca gtctttttcc aagtggagct gcaaaagctc
       61 cacataattt ccaaccagct gtgcctgttg tgtatcatct gtatgagacg gatcacacaa
      121 gaagctacgc aatagcctcg catccctggg agcttacctg gcttgtaagt tattcctggg
      181 gggaagagga atccctgctg ggctgcagca gccgctgcca gtgtccgctg gtcgtgtgga
      241 aaaattggga tcatgagcgg aggcatgtga ccctgaacct gctaaacaga agagagcctc
      301 tgatcagaaa cagcacaaat ttgtcttgac aggtatttct ccagcactga tactgttcct
      361 gcgttcacac agtcccacag aaccttcgcc ttaatgcaat ccctgccaac ttcacattat
      421 cacatcaaag tcctcacaaa cattgttttc cctcaaaagg tgtaacagtc ccggtgaact
      481 gcccccactt ctcccttctt tgtta
//
LOCUS       KCPA01003484             604 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 383953tic ultra-conserved element locus
            uce-1545, sequence.
ACCESSION   KCPA01003484
VERSION     KCPA01003484.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 604)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 604)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..604
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="383953tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>604
                     /note="ultra-conserved element locus uce-1545"
BASE COUNT          154 a          127 c          123 g          200 t
ORIGIN      
        1 tcattcattt tcagctgcaa taccacgctg aaaacatact tttgctggtc tgcagttgat
       61 tgatgtacat tactcatatc aggctaatgg cactttattt tccaacagta gcaagtaatg
      121 agtgaccttg agtgcatact gttttgctga gaggttttgt tgctccgtgt actctatgag
      181 cacccccaag gaaatgaggg ccccgtattg gtgtttttca gcaaacctca tttctttcat
      241 ggctttctgt aaaagaattt gatacaggga tagaagctaa cctaagtgag taaatgaaat
      301 attgatccac actactctgg ccttgccttc accttgtccc agggctgtga gttactgact
      361 tttccgtttt ggctgtaata ggaattatta caacaggcct gtgcaagtaa ttacttggca
      421 tggcaaaaag gagggtccat catatatttc tgtagagacg ttagtttcca tcaggccagc
      481 aggctgcttt tttggccctg tctttcctac tcttgattca attcctttaa ccatcattaa
      541 tcaagttcct tgtcagtaga agtttatcaa aagtattaag tgagcaaggt tgcacggcct
      601 cctt
//
LOCUS       KCPA01003485             302 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 384058tic ultra-conserved element locus
            uce-4309, sequence.
ACCESSION   KCPA01003485
VERSION     KCPA01003485.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 302)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 302)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="384058tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>302
                     /note="ultra-conserved element locus uce-4309"
BASE COUNT           88 a           72 c           70 g           72 t
ORIGIN      
        1 ttgcaaggtc tacattctcc agaaagcaca tgaatttggg gttgaggttg gaataggaga
       61 cagttcagac ctggtttaat cctgagaaag atgggtcctg agaagtacta acagtcatgc
      121 ttcttttcct cttccccact ggagattcta aacactgaac aaacaataga gggtggcagt
      181 gcatcaaaca gtcttgctta cattgcaaca ttggccggcg cagacaggca acaccgaggc
      241 gttcgagaaa gaacagggta gccaaatgcc atccttcttc caccaagcac gatctttcca
      301 tc
//
LOCUS       KCPA01003486             558 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 384169tic ultra-conserved element locus
            uce-4618, sequence.
ACCESSION   KCPA01003486
VERSION     KCPA01003486.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 558)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 558)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="384169tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>558
                     /note="ultra-conserved element locus uce-4618"
BASE COUNT          118 a          153 c          169 g          118 t
ORIGIN      
        1 tcgccccttg gtgagttacc ttggccgtta gttttaggtc gggacctcag aactgtagca
       61 tccctagaaa tgcagctccg ttcagaactg gtggaaatct ggcagtgtcc cctcttctcg
      121 gggcagtgac tcctgggcgt gtccagtaca ggtggggatg tgggagggct gtgctgggcg
      181 aagagcattg gcactaggcc ctgactaaga caagtgcccc agaagaagtg aatatgtcta
      241 ttgaccgatt gtaaaggtga gagaggatct ccaaagccca ttgtcactgc tgccatctga
      301 aagacagtaa agacagagtt cagtctgttg gagctgagca tgtttgtaca aactcaagca
      361 gagcggcggc acaggggcac ctgcggaggc ctctccttcc tcggccctca ctccaggact
      421 gtccggcgcc aggacctgcc gagtccggtc ccaccaggcc aggatggggc tgtgctgctg
      481 ccgctggggt gggatcccct ctgcaaccac tgtcgttgat tttaaaagga gcccctagag
      541 cagacccggc acagcccc
//
LOCUS       KCPA01003487             644 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 384279tic ultra-conserved element locus
            uce-7063, sequence.
ACCESSION   KCPA01003487
VERSION     KCPA01003487.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 644)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 644)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..644
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="384279tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>644
                     /note="ultra-conserved element locus uce-7063"
BASE COUNT          175 a          123 c          148 g          198 t
ORIGIN      
        1 tagctgtgga acccacagaa cttttaggga cttggcttca tttctttttt ttccttaacc
       61 ctctttcttt gtaccctgga ggctgtgaag gagggggaag agaaagcaag caaggagacc
      121 gacagacaag tcatgcttgt ttccagaccc tcaacaacag aactgagagg cagaaaggag
      181 ccagttgtaa ttcataccga gttgtaggct ttgtgtgatg aaagcgacag agcgctgcct
      241 gggagattgc tttgctgcac tccacgaagc agatttgaaa ctgtcgtgga ccactttaga
      301 tgagagttgg attatggaat gacctgctat gtctgtgtca tattgttctg cacagggtgc
      361 attatactct gctaactagg tgctcagtac caaataagag aggtatccta gatgtgatct
      421 gtcagctgtg tctcatattt ttatattggt taaaatataa aactgaaaca gtgatgaaag
      481 aggacagagc agttggatgc cttgtatgtt tacaatacat ctcatgctga gttttattta
      541 attactttga gagctgtagt attacctata attgacctcc taaaaatttg tctatgcgcg
      601 tatgtgcctg taacccatac cgcttctttt ctttccttaa agac
//
LOCUS       KCPA01003488             857 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 384387tic ultra-conserved element locus
            uce-4837, sequence.
ACCESSION   KCPA01003488
VERSION     KCPA01003488.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 857)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 857)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..857
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="384387tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>857
                     /note="ultra-conserved element locus uce-4837"
BASE COUNT          277 a          156 c          170 g          254 t
ORIGIN      
        1 gaggctctga agagttccag ggtagtatgg ctttttaaca tcctgctcag tagttaaagg
       61 gtattcagcc tgatctgctt ttgttgatag ctgatattat ttgacatttt aacaaggttc
      121 tgtatttgca gaagcatctt atggcaccac tttcaacatc agagtctatc acaaaaaaca
      181 tttcaactgt tttgcaaaca aactttcttc cagttaataa ttaaacagag gaacagcttg
      241 cagtatatgc ttggaactaa ttttactata tatagttgga aatgacaaga gcacatgaag
      301 atgtgactga agcctggtag catttaaata ctcagtactt cctctgttac cttgactagt
      361 gtaaagttgg ttcccaaggt aaaaactaag tggtctgctg gcatatggta taacctccat
      421 ttgagcgcta aaagctggat actgtttttg tgaaacagat gttgttgagt gcagcaatgc
      481 acaactgact ctatctaaca gctgggaatc cttcgtgacc catatagcta gaaataaaca
      541 tggtcctatg cttggcaaaa gtgtaaggaa gcaaattttc atttgttaag ggcttatcaa
      601 aatgaagaat aaatgttttt agccataaac tgattttatt cacaagagta atctttccag
      661 cagcttatgc gatggcctca taatattaca ggcacccttt gccagatgaa ggctgcagtt
      721 gcactgacat atagtgcaga tggaaaataa acatctgcct caatcaagag agaagaccaa
      781 agacaaggtt gacgaatatt atctggcatg actatctttg caggaaagca tataaatgct
      841 acaggaccaa aaccact
//
LOCUS       KCPA01003489             783 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 384501tic ultra-conserved element locus
            uce-1281, sequence.
ACCESSION   KCPA01003489
VERSION     KCPA01003489.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 783)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 783)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..783
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="384501tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>783
                     /note="ultra-conserved element locus uce-1281"
BASE COUNT          229 a          167 c          117 g          270 t
ORIGIN      
        1 ttacattttg gtcttttaaa tattattcta aatattcatt taattagaga ccaccgtgca
       61 ctgggattct cttctgacag aggctcatct caaggagaca tggaaaatgc tctcagagtg
      121 catcagctga gaattttgac tcatgtgaaa agtattccag ctctctcatt gctagatata
      181 attttagtat actgtataga gcagtggtgt atcaccagga atttaacaat acctggaata
      241 aataatgtcg cctggggcaa catctgccac ttatgcatta attccgcccc tgtttgaaca
      301 ctctacaaca tatgcacttc tcttttgtct gttatcctag agttgtgtta ttcccaaata
      361 ttgacatcat ctacttttat cagcactaac tgctctgaag cttcctagtc tcatgctcag
      421 ctctatttct ttctattgat tatcttcctc actccagcag gtagctagcc agcgaggctg
      481 tcctgagaaa tagcttccaa tgactttata cgcacaattt acacggaatt gtttaaagaa
      541 gatattagcc tcaatacaaa tcagtgaacc tcatttagtc aatactgcac aattcagctg
      601 ttggcaccct gtcacatgtt agtctttaaa gtcaactacc atacccaatc tgcacattag
      661 ccatagtatt tagtttcata ttaaaatgag gctagttttt cacttttctt tttgaaatct
      721 attcaatata ttttctacat cacctcattg aaccatatga tagcaatata attttaagta
      781 taa
//
LOCUS       KCPA01003490             455 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 384613tic ultra-conserved element locus
            uce-6226, sequence.
ACCESSION   KCPA01003490
VERSION     KCPA01003490.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 455)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 455)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="384613tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>455
                     /note="ultra-conserved element locus uce-6226"
BASE COUNT          168 a          102 c           81 g          104 t
ORIGIN      
        1 cttcccaggt atacttgctg cctgaaatat gaactgagga ggaaactcaa gctggcacat
       61 tagcaaaagc agaagacacc agtttcttcc aagcaccgct cagggaacag ttatgcacaa
      121 aagtctctct gatacataat ccagtgcaag ccaatggcac acaagccagc ccatcccatc
      181 gtgtctggac ataaaaaaat gaatatgaaa tgactactat gtgtctctga atgtagacca
      241 gcacagcagt gactacacag cactttctat attcctactg tgtaccaggc aaagattttt
      301 cgttcataca tcattcacaa cagggattcc acaaagccag tacatatcct ttacacaaag
      361 aaaaaagaat agatttagaa aagattctga aactatgtct gctggatgag cagtacaata
      421 cacaaagctt agcaagaagc aaaataaata agtaa
//
LOCUS       KCPA01003491             519 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 384722tic ultra-conserved element locus
            uce-3223, sequence.
ACCESSION   KCPA01003491
VERSION     KCPA01003491.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 519)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 519)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="384722tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>519
                     /note="ultra-conserved element locus uce-3223"
BASE COUNT          187 a          102 c           75 g          155 t
ORIGIN      
        1 agatgctgca aaaatatgtg aaccagttat ctgtacacaa aagcacatga aaagatacta
       61 cagagtggca tgattgtatc cgggtgcctc tgctataaaa agcatttgta ttacccttac
      121 ttctctgaat aaattcaaat gacagcccca tttcatttct tcattcagtc tggaggccag
      181 atggcattag aatcatttac ttcaccttgt tgtgcttaat tactacaatc aacacactat
      241 tttccaaatt aatcataaca aagtaatttc attagtaaca cagcaggctg ttgaattatt
      301 agcatcataa cagtttgcaa acaattaaac tttatttgaa ccttaaaaat ttgcagagta
      361 gaacattatt ataagatcta atggcagtac catacaaatc cagaacacag caaataaagt
      421 aaaacgcatg tgagagttaa aatctgctct ctcaccgttc acacgtgaac aaagaaaatt
      481 agcatcttcc agcgtattaa ctgagatttt cttatccaa
//
LOCUS       KCPA01003492             626 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 384831tic ultra-conserved element locus
            uce-6214, sequence.
ACCESSION   KCPA01003492
VERSION     KCPA01003492.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 626)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 626)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..626
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="384831tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>626
                     /note="ultra-conserved element locus uce-6214"
BASE COUNT          187 a          105 c          138 g          196 t
ORIGIN      
        1 acaaccagag ggcagctgta cctgtaggca aggatagcaa caaatgctgg catgtctatc
       61 catgcagcta aaaagaagca actacagtgg aaatgcacct actgtatgtg aattcttttt
      121 ttctatcagt ctaaccttct gtgttgatac atgaatgctg gtacccactt agagggatgc
      181 cagatgatca gtgcagaatg aaggtcccag gagaaaggct cacgtggttt tctctgcccc
      241 gtgacgtcat tagcagatgg catgggtacc agctctggca gttggcatca atgtcacttt
      301 ttagagatca atgagatagt gcagatatac acacatctag actccagcag acgatgcgac
      361 attcagactg aaaagatttg gaaggagaac tgattgttga atgaaataaa aagctaaggt
      421 aatacaaata aagatttcaa ttggtgttgg gtgtgcatgc aagtgtttaa agatacagta
      481 tcgtcttgta ttttgtgtat gctattgctt ctaataattc ctaacatttt attcttctaa
      541 tgtaatttca aactttcatt gtttttatgt aatactgcaa gtgtgtaata ttgatagagt
      601 tagtctttaa ctggggtttt tgttta
//
LOCUS       KCPA01003493             740 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 384937tic ultra-conserved element locus
            uce-1192, sequence.
ACCESSION   KCPA01003493
VERSION     KCPA01003493.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 740)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 740)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..740
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="384937tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>740
                     /note="ultra-conserved element locus uce-1192"
BASE COUNT          216 a          170 c          129 g          225 t
ORIGIN      
        1 ccctcgaaaa cttaatggct ctgtagtata aacatcctca ttgtagaact aatggcctaa
       61 aacctgttgt aattacttcc tacctatatc agcaggtagc tgaaaaatgt aaaattaaca
      121 cagagaacac aatctgatta ttttaccaca actaaataaa atgcaaaatg taattactat
      181 tatcttccgc ttccatagcc tatgctttca tcactcggtt ttttgtttgt ttgtttataa
      241 aattaatcac agctagcagg gtggaaatca ctttgagcct catgaatgac atccaagaga
      301 tgggaaagga ttagttctca gttgctgcca gttatagcgc caggtggctt tttctgcagt
      361 gaaggtgtta ctgataatcc cattacactg gtactaaatc ttgcagacat caaaattatc
      421 accaaggttc cttttcatcc catcctttcc aaatgactgg aagtcgcttc acctgaaaga
      481 agtcaaatcc acatgcagct gctgttttag cagccagcgg actccctgag aatgccaatt
      541 gtgatccaat ttcgctgtgc tggtggcccc ctattccctg tccaataata catctgttaa
      601 aaaatcctac agctacaaat caagtttaat cctaccaggg acctcatgtt ggtcttgtct
      661 tccaaaaagg cagcaggttt tgccgtctat ctctgccagt gtctggggaa tactctttaa
      721 atcccagctc tacttagaag
//
LOCUS       KCPA01003494             476 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 385042tic ultra-conserved element locus
            uce-1374, sequence.
ACCESSION   KCPA01003494
VERSION     KCPA01003494.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 476)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 476)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="385042tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>476
                     /note="ultra-conserved element locus uce-1374"
BASE COUNT          150 a           71 c           99 g          156 t
ORIGIN      
        1 ttaagaaata tgaacaaaat atgagtggct ttaaaataat acaactctga gctttaaaat
       61 attctttggg tgctctggag ctggagatag tcatgtcttt gtgatatttc agtgacaatt
      121 tctattttaa gtgtcaaaaa caactctgct atctggagca agtagtgtag tattctcttc
      181 ttttaatatt ctaatcgtga ggtgtaaagt gaaatggttg cacagtgtaa tggtggtaaa
      241 gaagctgagt gtcaatgaga cgggaaaggt gacagacatg gaatgagtcc ccaaggtgct
      301 ctccaagtgc attggataaa gattcccctg ggaaattttt ctcattagtt ctcagacaca
      361 gttcagtaat tcaatagcac caggttacca ttagtcacaa gaccaaaata tgttactttc
      421 catgctttag ctctttgatt tgtatatgtc attttatgag agaaaatgat gaaatt
//
LOCUS       KCPA01003495             643 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 385152tic ultra-conserved element locus
            uce-545, sequence.
ACCESSION   KCPA01003495
VERSION     KCPA01003495.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 643)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 643)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..643
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="385152tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>643
                     /note="ultra-conserved element locus uce-545"
BASE COUNT          222 a          117 c          106 g          198 t
ORIGIN      
        1 ccccattccc gtggtgagaa aggtgatggt atgtttatca cacagccagg aaataaatgg
       61 gagccattac aaaggtgtat aattcagcaa ttacagttat ttgttttttc tgacaccccc
      121 tgcaaacagt tatcgcttca gtcaaacata atcaaattat ttttcctggt actgtacatt
      181 aacagggcaa ataaaaggga aaatagtgca gtcccttgta ataaagaaaa cagcagcaaa
      241 ctattaatgc tctttgaaaa gagtagtttt aacaaagtaa gcaagaatca ttttctttgg
      301 ttgagtgttg attccccagt gtgctctcag taagtaatta gaatggccca gtgaatgtca
      361 gcatcagctt gtttattctc attattttat cattttaaaa accctctagg tgatgagaca
      421 tgcagtatag aacataatta ccattattag catactaatt ggacacaaaa ataggccaac
      481 tacaaggtag ccaactgaat aatttcacat taatcaaaca ccatagtgaa taagcctatt
      541 gttaaattga cagctacaat aattggcaat atttcgctgc gcaatataag aaattccttg
      601 taatatctct gccacgttat ataatttagt aatttcccac att
//
LOCUS       KCPA01003496             481 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 385258tic ultra-conserved element locus
            uce-7164, sequence.
ACCESSION   KCPA01003496
VERSION     KCPA01003496.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 481)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 481)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="385258tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>481
                     /note="ultra-conserved element locus uce-7164"
BASE COUNT          159 a           87 c          122 g          113 t
ORIGIN      
        1 atgcaatgag aaatacatta atttactcag cgcagcaagg cacatttggt ggattagcta
       61 aaataacaga ggggaaaagc tggggtaagc aggctgaagc cctgtgtgtg gccaaggcag
      121 cgggaagcaa ggcagagaga aagagaatga acccaacaac acaacagtgg aacaggcagc
      181 tggcctgaga tgctaattca gcgctttaac aaatcaatgc cacttgaaaa gtacaatgcg
      241 agccctcact gggtagatgt caggggacca agaaaatgca ttctcaagta tttcacatta
      301 agagggaata atgtgttaat ttataactct tcaccctata cacttggatt atccatctgt
      361 gtcagtgatt tgacttctta aatttatcaa aaacatgcgc aaagggaggc atcttctgct
      421 aaagcattgg gaaatagcga ttcaggaaca gtattttgtt gttgagtgga cggctggagg
      481 g
//
LOCUS       KCPA01003497             508 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 385365tic ultra-conserved element locus
            uce-3940, sequence.
ACCESSION   KCPA01003497
VERSION     KCPA01003497.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 508)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 508)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="385365tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>508
                     /note="ultra-conserved element locus uce-3940"
BASE COUNT          151 a          119 c          113 g          125 t
ORIGIN      
        1 aaaagaaagg gagagagaca ttttctttca cacaagccct cagaattaca gttcatgaac
       61 tattcagtaa actgaccggc atgaacctcc cttcaacggc ctaatctaag gggtggatct
      121 atgtgttttg ttgcttgtca aaaacaatca ctgctcggcc cattacattt acagcacgtc
      181 gtcctttaat tggtgtaaca cactgagggc tgaaaggaag aaagtcctac aaaagcccca
      241 gagtgaatga accctgactc acacaaaaat actcttcaga agttcagagc tgggcactaa
      301 caagggaggt agagagttag tttgaaaagg ggttaagttc agaaatgtgc caccttgaag
      361 accctcccat caaagccatg atagcattga caagatgcag ggaaaaaagt taatattccg
      421 gcctttcggg tttgaaggga acaggagatt cctcccggct ccccttcccg gccttaccct
      481 tttcacttcg gggccgttct cattgtgt
//
LOCUS       KCPA01003498             453 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 385470tic ultra-conserved element locus
            uce-6406, sequence.
ACCESSION   KCPA01003498
VERSION     KCPA01003498.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 453)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 453)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="385470tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>453
                     /note="ultra-conserved element locus uce-6406"
BASE COUNT          166 a           86 c           80 g          121 t
ORIGIN      
        1 tattgcttcc tacatcaata aaaagtgtac tttacacaaa gaaaggaaac ctgcttaaga
       61 aaatgctagc taaagttact aaacattcta acaattatca taaaaatgct agaaaagaaa
      121 atatagatat gttaagcaat cctaaaatct tcttaaaccg cacattgtgc ttgcctacag
      181 agaattttta agatgaaaaa tagaccttga gggtcttaga caagcctgag gcaatataaa
      241 gaaaaggtca aacactctgc taaaaaggac tgttatcttc agaacaacaa cttatcagcc
      301 agcttgcagc cctgcttatt tacagttatt ggtcccagag gaagtgcact tcagcgcagg
      361 gcgcgattac tttgtaatga gtttgccaga aatggtaaag gaaactaatt tgtaacaatg
      421 tgctgttccc ggcacatgaa ctttctcaga cac
//
LOCUS       KCPA01003499             992 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 385568tic ultra-conserved element locus
            uce-864, sequence.
ACCESSION   KCPA01003499
VERSION     KCPA01003499.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 992)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 992)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..992
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="385568tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>992
                     /note="ultra-conserved element locus uce-864"
BASE COUNT          346 a          184 c          188 g          274 t
ORIGIN      
        1 ttgaagtggt agcaaactga gtttgccctt tgctttaaca tacctaggta tctggatcta
       61 tattcctgat tgctattgaa ttttctagat ttcattataa aatcaataac cgttgcacat
      121 ggtaaaatag tttacaagaa ctgcaacata ttgcggaccc ctgaaaacat actgagctca
      181 ctgaagccac ccaggcagcc aattaggaga aaacatctat taaggaaaaa cagggcagtc
      241 ccattgactg ctattgattt tctcagccct gtgaaaagac aatcaattag ataaagaagg
      301 ctaatgttac agctgcaatt taataacccc taaagaaagg aggagggcta ttgattcctg
      361 acatggaatg cggagcttat tgaaatatac tgaacttcac ctgtcttata atcaggcctc
      421 gaggaaagaa ctcaatgtaa cttgtggcat agaatctcaa ctattaaact ggcttggtga
      481 tgtcagacct aagagatgca aatgaaacaa aagtttagag gaaacacaag tccagggttg
      541 aatactaaat cacaggagct attgagagac actgctttgg tgaaggttgt ttctctcata
      601 cagaaagcac cagagtacca cctgtcattt tcaaaagcaa agtcagtttt gccaaccacc
      661 cgtgaatgac aaataaagct ttatatgaaa cacaagggca tattatgtgc tattgtgtgt
      721 tctgctaagt gctaatttat ctggcttgtt ctcttcagca aacacacgca cagacacatg
      781 aaataatcca tctaattatg tagctattta ggagaaaaac aaagcaaggt gtttttgtct
      841 gaaacagaag gtacatgata caacaaaggt ttcatcaaaa cctaacacag ttaatgaaaa
      901 taaatgaagt ggggtagctg taacaatttt cgaacaaata aacattttcc agttttatat
      961 ttagggtaga cccagctgcc tttcataaat ac
//
LOCUS       KCPA01003500             600 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 385678tic ultra-conserved element locus
            uce-2259, sequence.
ACCESSION   KCPA01003500
VERSION     KCPA01003500.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 600)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 600)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..600
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="385678tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>600
                     /note="ultra-conserved element locus uce-2259"
BASE COUNT          191 a          109 c          119 g          181 t
ORIGIN      
        1 aactctagta aaatgtgtta gttacaaaga catgatttga gaggaacaga gatgtaaacc
       61 gcttttatca tctatgcaaa aaaaaacaga aacagaaagg tacagatcat tatgtttttt
      121 accttttaaa gtggaatgaa gtcatgttat taacctcaaa taatgttctg aaaggctatc
      181 ctagcagaat gtacatcagc tgttagatta cttcattcct ccacagcagt tgttcatctg
      241 aaaatagctt tcaaatgaaa agaggcaact acaaaaggat tagttaccat aggcagcatg
      301 atactcccac aagattattt atggcaaaac acccagagac aaagctgtaa gagagttaaa
      361 ctctgtgtat tagggagggc tagaggacat tgcatatgca gtaagctggg ttcagtgctg
      421 taccatttct gtgtatttcg tccataatgg ctgatgcttg ctctttcctc tctttgacca
      481 gggcagaatc tgataacatt ttctgatatg attttccttg ctgcttttca tattattgag
      541 gcagcatgca cagttggcca actttcattt ccagcagcct gtagaatggc tgaacagtga
//
LOCUS       KCPA01003501             547 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 385786tic ultra-conserved element locus
            uce-7055, sequence.
ACCESSION   KCPA01003501
VERSION     KCPA01003501.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 547)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 547)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="385786tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>547
                     /note="ultra-conserved element locus uce-7055"
BASE COUNT          160 a          146 c          142 g           99 t
ORIGIN      
        1 ggacactcag ccaggactgc gtcatactgc acagccatgg gggtctggag cacgcagctg
       61 atgggacagg aacgccagga atgcacaggg gagctatgga gaaaaatcat caccgaggcc
      121 acgccagctt gggccggagg gacccggcaa gcagccagga caggaaagcc accattccat
      181 tcccagcgtt cacagacact cctactgcca gcaagtacct taatgaatgt ttccatattg
      241 ccgttaaaga gtttatgatt atagactgag agaggcctag gtctcctcat tttctgtggc
      301 ttagggggaa gacatggggg cctgggagaa aatggaacaa aataaatcaa caaaacacca
      361 aatgcaatga cagggtgaga tctcacaggt tgcaactgag aataaacagg caagtgcctc
      421 tgtgaggatt tgatgtgtca cacaccctgc agccactccc actgctgtgt cccacacgga
      481 caccactcca gcaggaaacc aatggtttaa cacctgcctc actccctcag cctgaagagg
      541 caccaag
//
LOCUS       KCPA01003502             429 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 385985tic ultra-conserved element locus
            uce-3183, sequence.
ACCESSION   KCPA01003502
VERSION     KCPA01003502.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 429)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 429)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="385985tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>429
                     /note="ultra-conserved element locus uce-3183"
BASE COUNT          121 a           82 c           79 g          147 t
ORIGIN      
        1 ttaatttgct gttaaaagag gagagagtga actgcaatta tgacaaacca acaatttcta
       61 ttcagacctt taagtgacat ttttagatgt taaaagtaca aactttacca cactcttttt
      121 ttggcctaac attgaggcct taaaccttga ggcttctgtg cctgatggaa ttcttgtaac
      181 atacacttgt gtatcatata aagataccac cctgtttctc ttatgtattc ttactctagt
      241 tgtttattaa gaatgacgag cacgtctttt caacatgcca ttgaacaatg tgtctttatt
      301 tggggaagag tgagctgaga gggtgggggg tcattataca aagatcagta tgcaaactgg
      361 ttgtcttcat ccctgttcat gctttccagc tcaactctgc tggatttcta ttacccctac
      421 aacttaaga
//
LOCUS       KCPA01003503             674 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 386093tic ultra-conserved element locus
            uce-6774, sequence.
ACCESSION   KCPA01003503
VERSION     KCPA01003503.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 674)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 674)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="386093tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>674
                     /note="ultra-conserved element locus uce-6774"
BASE COUNT          209 a          117 c          117 g          231 t
ORIGIN      
        1 gtgactgtag gagacctcag ctgtgttttt caccttttga tcaaaagccc agtacaacag
       61 agataaagaa cttgcacgac atttttgaaa tggaagcaaa acatgtggta ttgcctggca
      121 atgttgaaaa gaaatatgta agattaaaac aagcaagtcc aagcatgttt tttcagtaga
      181 taatacatat atacttaatt taatgcagca gctttggttg gtctatttct cattcttttt
      241 ttaaagcata taaattccaa ccatgttttg tgtgaagggt ctcagtgcat actgacattg
      301 tgagtgtcag ctccagatca ctttaatcag agagtggata tgcatgataa aacggataag
      361 ggactttaat caaaaaatcc gctggtctgg aaacgtgacg cactccgcca aacacacttc
      421 atcccacttt tcttgtgcca ctgccaagat ttttatttca tgaatatgca ttggacatga
      481 tattacatta aaatgtgaca ttgttgtgta gtggtaggga tttagaatta gaataaataa
      541 ataaatactt ctgtaaagtt tttgtaattg aacattagta tcatgttgtg attttacata
      601 tatttattca cctaccccct ccttctctcc aaatttattt ttgaatcgca tattgcattc
      661 attcctttct gctt
//
LOCUS       KCPA01003504             525 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 386202tic ultra-conserved element locus
            uce-2060, sequence.
ACCESSION   KCPA01003504
VERSION     KCPA01003504.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 525)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 525)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="386202tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>525
                     /note="ultra-conserved element locus uce-2060"
BASE COUNT          147 a          101 c          110 g          167 t
ORIGIN      
        1 cttatgcact ttaatgaaac agtttgtcct tattaagttg aaaatagaaa tacacctttc
       61 ccccattgga gacgtaaccg gaatggcaca aggctgtgga gttttattat cttggtctca
      121 gcttaaaata ctaagaggtg cttctttaag aaagtttaag agaagttcta taaaccatgt
      181 ctatatataa tcccttttgt aagcatctag gaaactgcag gacggaaagg ttgcctgcca
      241 gacctcagaa agcaaatact aattcagcag tctagtcact ctgtcaaaca tttagtgtat
      301 cagggttgat tgttccctgg taggtatagc tctggtatat ccgccaggcc ttttgtcatg
      361 ttaactgcaa ccgatcaatg gattgaggtc aggacttctg atgtaggtgc aagcttagag
      421 ggaaaaaagt ctcaaagatt cattttttct cgtctggtag cactccggtc acttattttt
      481 tctcagttag cctctgctgc tctaaagtgg atattgatca gtgct
//
LOCUS       KCPA01003505             579 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 386310tic ultra-conserved element locus
            uce-7888, sequence.
ACCESSION   KCPA01003505
VERSION     KCPA01003505.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 579)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 579)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="386310tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>579
                     /note="ultra-conserved element locus uce-7888"
BASE COUNT          164 a          139 c          124 g          152 t
ORIGIN      
        1 agggaaagaa agcgcaaaat aaatgtaaac actctcctca cgaaacggtt aaaagcacaa
       61 aattaaaaga taaagccttt aaacgacttt acagtgattg ataagacagt ggtcactcca
      121 gtgcttcctc gcagtccctg ctaattactg gcaggccatt gaaggcagcg ggcacagctg
      181 cgcgggcggg cgcgccgggc catcagtcgc tcccggtatt gattactgag caattccagc
      241 cgatcgggtg ctggcgcttt agagacaatg tgcttccctc agaaaacctg taatgagcag
      301 ttcctataca agactacatt ctgctgacat cagatctctg cactaagata gtacacaggt
      361 caatacatat tggatttcca aaatgctggg gtcttaatgt cagggcctct ctttttctcc
      421 cactcctgcc attagctatt actgggttca cattctttaa tgccatacag gagggggaaa
      481 aaatctcctc cattagtctg atttattctt caaatatgcc atgacaaatt gctttaacac
      541 cagacttatt aaattcttgt acactcggag ttgcggggc
//
LOCUS       KCPA01003506             567 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 386420tic ultra-conserved element locus
            uce-5419, sequence.
ACCESSION   KCPA01003506
VERSION     KCPA01003506.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 567)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 567)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="386420tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>567
                     /note="ultra-conserved element locus uce-5419"
BASE COUNT          163 a          100 c          129 g          175 t
ORIGIN      
        1 gctttttgtc aggaacaaag agagggagac atgagagtgg gtgggggtta ggaatccttt
       61 cttatgtgtt ttaactcaaa ttctaggtgg cgtttcagct attcaacctt tcttaacacc
      121 tgtgtgaaca tttccctgtt gatcatccct cctaatctct gtcatttcag ttctgttttt
      181 aaagttaaat gactgaaagt actgaactaa aacttgctgg tgacactgac tttttaccac
      241 ctaaaattgg cagtgatcac cagaccagaa atggaaattg gcaggtacca ctggatgtac
      301 aggagttcaa ggccacaccg gtaccatcat gtgccagcat tgagaggcaa tattagtcct
      361 ttggggattc aaggtaaata aagggctggg tgaaagggaa atgaagagtt cagaaatggt
      421 agtagcataa acttaatgct ttgcagtagt cctaacaatt ttgtttgtta aggcggagtc
      481 tacttcactt gacataaatt tgaatttctt tttaatgctt gaaaaacaat aatgggtgat
      541 gtgagggacc cttttaactg tgctccc
//
LOCUS       KCPA01003507             650 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 386530tic ultra-conserved element locus
            uce-7409, sequence.
ACCESSION   KCPA01003507
VERSION     KCPA01003507.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 650)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 650)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..650
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="386530tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>650
                     /note="ultra-conserved element locus uce-7409"
BASE COUNT          185 a          136 c          133 g          196 t
ORIGIN      
        1 aggctgtgtg ccgtgttcgg ggggatctac tgcctccgtc acgccgtgcg ctgcctggtg
       61 ctggacagag cctcgggacg gtaaggctga caccgggaac cttctgttta tacactaaac
      121 acaggtgaaa aatgtcttaa gtcaattctg attcttccga gatcctcctt ggtattaata
      181 acacatcagc cttgattaaa agtaatttgt gtataggtcc tccagaacaa ggaaagtggg
      241 tctagaatat agaaactaaa ttaatttccc tgtgatatta ctacagctcc tgatcaccca
      301 agcttggaag acaaatcatt tcagctgccg gggggctggt gatgagtgat gttagttttc
      361 cttgtggcct tacctactct aattgatttt catcagatga caacaaagcc ctctgttatt
      421 gcatttttaa aaatggagct cacctaaaga ctcatcagat taatctttgc tgataatgca
      481 tgtcactcca agagaaaaga ctttaatgag tttttaggta gattgttgtc ataaactgtg
      541 ctgctctctt attccagaat aaattctttt acaacactat caggcctgtt ttaaagttga
      601 gctaagaaaa atcaacacca aaagtggtat cacacctctg taaattgtcc
//
LOCUS       KCPA01003508             572 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 386644tic ultra-conserved element locus
            uce-5996, sequence.
ACCESSION   KCPA01003508
VERSION     KCPA01003508.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 572)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 572)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..572
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="386644tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>572
                     /note="ultra-conserved element locus uce-5996"
BASE COUNT          185 a          103 c          145 g          139 t
ORIGIN      
        1 cagtggtctc ctgcttcctg tctccagctg ataggactgg gatggtggag ggtcagggag
       61 aaggggaggg gtggggggcc ggcagcgtct gacgactgaa acagatgatg ccacacacca
      121 cctatgtaaa cagaaatagg cgctggggct gatggagcac agagatatga ccctgcccat
      181 agagccgctg agtctagact ccagatgtgt tctcactgtt accaggccaa ttcagatcca
      241 actggtaaat atttctacca gatgacagtg ggctcagtta cagaaatgag gacaaaggac
      301 aaaaataggc agaaaatgag tactgggcat tattgctgct tagaaaaata ttctgcatag
      361 ttctggagat gttaaggggc aattatttaa atagatcata tacattcttt ttaccatgtt
      421 cagctgaaaa agatccaagt caaactgaag gctatttagg caaattagtc acttaaaatg
      481 aactgaaacc gaggtctgta aaggataaaa taaaatttat tttaccatac ggaataaaga
      541 aatgaggtgt tgataacctc aggctggtaa at
//
LOCUS       KCPA01003509             605 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 386747tic ultra-conserved element locus
            uce-1830, sequence.
ACCESSION   KCPA01003509
VERSION     KCPA01003509.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 605)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 605)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..605
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="386747tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>605
                     /note="ultra-conserved element locus uce-1830"
BASE COUNT          200 a          107 c          123 g          175 t
ORIGIN      
        1 accgagtaga tttaattgtg aagtttccat taaggaagga gcaggcagac acacttgcag
       61 aacatgtgca gggtgtacta catagctaca cagccataaa ttgctcgtgg atcaaagatc
      121 agggcttaaa tctgagctag gctacagtac acagaaaatg aacgatggaa ccatcttgct
      181 actgcctgtt tcacttaaag atgataagga aatattatca cattatttta aggtaaatcc
      241 agcatttcca gagctgattg aggcaagaat tagacagtgt ttaggggatt atgaaaaaca
      301 gcttcctcta caggtcaaca gctaatcaga attctcatga gattttccaa agatgcctta
      361 tgaataattt caccaaaggc acaaaaacgg gcacattatt tagagagagc cttttgatgt
      421 attttctctg aataagcacg ggtattcgag gatttctgct agttcagagc aacagggacc
      481 aacttattaa atgttcctgc tgcaatgcct gcaagctagc tgagattaat atcagcataa
      541 cctgttactt aattcattat ggggatacag gctaatttga tttgatatta ttttaataaa
      601 gttct
//
LOCUS       KCPA01003510             705 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 386855tic ultra-conserved element locus
            uce-2274, sequence.
ACCESSION   KCPA01003510
VERSION     KCPA01003510.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 705)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 705)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="386855tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>705
                     /note="ultra-conserved element locus uce-2274"
BASE COUNT          219 a          124 c          127 g          235 t
ORIGIN      
        1 ttaataaaag gatatcgccc cctctcttat tgataaagtt atgactgttt aaattcatct
       61 caattatatt agaaggaact ctccattctt tgagagaaac caattatttc cattcttttg
      121 aaatattaaa actgaagagt ttcaaatggg agtaatacaa attacatgct ttaagactag
      181 tcatagtctg tagtaacaat tctgaatttg gaaggaaatg tgaggtatga tatccaatta
      241 ctattcttgc ctcatcccct atttttgggc atatgactac attagtattg ggcaggtata
      301 gaaaatggga aagttagcat ttatgagaga ttaccatcag ggtaatattg ctggttcatg
      361 ccttctggag gaccttgtcc accatgactg tattggtccc cataatagtc ttcctggcct
      421 gagtactgct gtggtgggcc tgaaaaacca caaccagtca atacgtaaat aacttggcct
      481 gctaatttct gattttagta tcagaaatat ttctcaaatg tactccccac ccatactgtt
      541 gcattagagt gtaatctggt ttagttgtaa atgtatctat ctacatatac aaacacacgt
      601 ttggctgcac tagactgaga ccaaacttca gttttgagct cattttagga atatgtgtat
      661 aacagactag gatgttaata aaattattcc ttgttgaaaa ggact
//
LOCUS       KCPA01003511             583 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 386965tic ultra-conserved element locus
            uce-7709, sequence.
ACCESSION   KCPA01003511
VERSION     KCPA01003511.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 583)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 583)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..583
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="386965tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>583
                     /note="ultra-conserved element locus uce-7709"
BASE COUNT          188 a          107 c           92 g          196 t
ORIGIN      
        1 cccaaagcca tctgcagttt aactcttgtg aaagttagga acacacatca gactgatcga
       61 ttttctctct ctaaacagtg aagcttattt taaaaatact gaatatgata cttaacacac
      121 tctattcaca tgactttaca gcattattca ttactaatga aaaacatggg aatttgctaa
      181 agttcaggtt agccaaaaac aaaataacaa tcaacacaga atattccaag tagtctcctt
      241 accttgttct tttatctgac gaatttgctt cacagtttct ttcaagattg cacatttgtc
      301 aggtttgaag ttaaagttgt caatatcatt aaaatttgca aaaatcagct ctgcaagttc
      361 ttcaatgtat ttattctctt gctcacgatt acgtttctca gtgcttcttt tagggctgaa
      421 aaatgctgtc tttaatgtca gtttgcttgt cttcttgcca gctcaaagat gaaaaaggtt
      481 tgacagtagt tcgacgagag agaacaaaat ataagttttt ctcaagctct ggaacaaggt
      541 tagaaaagat gttacccagc agtcatgttt ttgtttcaaa aga
//
LOCUS       KCPA01003512             489 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 387065tic ultra-conserved element locus
            uce-1846, sequence.
ACCESSION   KCPA01003512
VERSION     KCPA01003512.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 489)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 489)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="387065tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>489
                     /note="ultra-conserved element locus uce-1846"
BASE COUNT          158 a           70 c           96 g          165 t
ORIGIN      
        1 taatgcagaa tttctacctt acatgttaat taatgtgtgc aatcaattac tgatgttaca
       61 atatgagaaa gaaactggtg gggaatgggg taataaaaaa tacctataga tttatctgct
      121 tcttttttct atttaaacaa atagtcttca agtctgtgaa tgctgtgttg agacatgctc
      181 tgaataataa gcatcataaa atctaatcag atttataaga ggaattgatt gttgtggcag
      241 gaggagaggg tggaaaataa gctgaaattt aagtgttaat ttttatgcta atccacagtg
      301 gcttcatatg aagcaatttt gttctgtgcc acaaatataa aattgtccct tgcagagaaa
      361 tgtcagcttg ctagacctga aagcagtaat ttattaggta tgtttctatt agtatgtgtc
      421 acagttgtta gcaggctata cacacaatgg tgcttcatac ttatcctcca agtctcagaa
      481 tgtttcagc
//
LOCUS       KCPA01003513             460 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 387175tic ultra-conserved element locus
            uce-5048, sequence.
ACCESSION   KCPA01003513
VERSION     KCPA01003513.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 460)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 460)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..460
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="387175tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>460
                     /note="ultra-conserved element locus uce-5048"
BASE COUNT          164 a           74 c           82 g          140 t
ORIGIN      
        1 tctgctttac tactgaatgt aaataagctc ttccatgctt gtcatcttac actgatagta
       61 tcataagaca agtaatgaca gattaagacc tgcctagcag agggaaaact aaattacaag
      121 acttttatta aggcataaat aaacctatta actgttatct ggaataccaa ttagtggaag
      181 gagcactgac aattttattt atcaacatta aacacaatta ttaattacag acctgacgaa
      241 tctagcagta agcaggacat gttgggtgtg ctggggcctt aagtccatta tatgagaagg
      301 atgattacca aaatcctgtg gggaaatacg taattgtagc tgtaaaattt taattgccaa
      361 taaggtaaat tatattctct tgtctcagaa tataaatagt atggcattaa ggtaccaagc
      421 ctcactaatt ttgaacagca aatgatttag acatctgtag
//
LOCUS       KCPA01003514             820 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 387286tic ultra-conserved element locus
            uce-2008, sequence.
ACCESSION   KCPA01003514
VERSION     KCPA01003514.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 820)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 820)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..820
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="387286tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>820
                     /note="ultra-conserved element locus uce-2008"
BASE COUNT          229 a          152 c          177 g          262 t
ORIGIN      
        1 tgtagcatca aggttatggg tgagttctgc tgcaggccct tgaggatctt tttgggaaga
       61 gacatcttaa atcgctagtc atacacaaaa tattattgca atgaaaaata gtgaagtgaa
      121 taaacagcag ctcacagtac aggatgcttg atgtatcagg aatcctagtg ttcactgtat
      181 tttgcaattt aatgcacaat aattttttag ttctgtattt ctgtatgctc cactcactga
      241 tctgtattct caggatgtga ggttccatta aaaaataaat aataatcgca gcccccgctc
      301 cccccacgta cactcatttt ctgtaatatg gtaatgatat caccgtagca gtaattacgg
      361 gtcatcttca tttctttcat ctctgctggt tctgatggct tcattccttt gacagagaag
      421 atttggctgt gggtgctgtg attattttgt taagcattat tcgaatagac aggagtgaga
      481 gaaattaatc aatccaaatg caattagcat catgtttaac ccagtgatgg acgtctcaag
      541 gtgaaacagc caggggagtt tcagacatta ttattcaatc cagtggctct tatctaaatt
      601 ataatcaaga ggtttttatt ggctttgctg agagaagatg taactctttc cctgctttgg
      661 gggtcaaagg gatcagatct ttggccctac aagatattgg ctgcaggcag ctcctagaat
      721 tgggagggag tttactgtaa tatcagggtc actcaggata aaatacctgc acgtcctagt
      781 atctgacata agtttagtag ctccctggtc attggcagtg
//
LOCUS       KCPA01003515             771 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 387388tic ultra-conserved element locus
            uce-6813, sequence.
ACCESSION   KCPA01003515
VERSION     KCPA01003515.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 771)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 771)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..771
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="387388tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>771
                     /note="ultra-conserved element locus uce-6813"
BASE COUNT          180 a          179 c          172 g          240 t
ORIGIN      
        1 ggtcctcttt tgaaatgagc gtgttacaat tctcccattc tctttataaa attggaagtc
       61 tcaaggtatg tgaccagttg gaacctgttg catcttgcag caagtgattt atgttcacag
      121 ttttgatttg cctcaatgaa aagattttca ttcatagccc ccagctctcc agacggatgg
      181 aattgctgct ccatttagga aaaggggtga ctcgccttgt taggaaaaag cgctgcagcg
      241 cctatatgcc tgctttgtcc tcccttcagg gtggctggca ttcttctctc tcctctctct
      301 ccctctctct ctttttaaca acgctgaagt tgtttattct ttttggatga agtctcagat
      361 aggctactgg ggatgtgtgc ttcaattgat ggggccccct accccattgt ggctgtgtca
      421 ggtctaattc atctcaccga agcccccttg ttcctgagcg ctcaatagcg caagatgagg
      481 cgatggaggc tgacaatgat gccacactct tcacttgggg gcatccaatt acaggcaaga
      541 ggggccccct gattaatatg ctgaaattag tggcctctgc cacaaataat tccttgttga
      601 gttgcaacaa aaaggcagtc catgctgctt gtctggagtg gttataggga cagacacaaa
      661 ctggtcattt aaacttcatt atcacttttc caccttggaa agaatgaggg tgtgactatg
      721 aattcatgtt cttgtttact ctgtcatgac gggctcatta aagacacatt t
//
LOCUS       KCPA01003516             668 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 387497tic ultra-conserved element locus
            uce-1424, sequence.
ACCESSION   KCPA01003516
VERSION     KCPA01003516.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 668)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 668)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="387497tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>668
                     /note="ultra-conserved element locus uce-1424"
BASE COUNT          226 a          125 c          102 g          215 t
ORIGIN      
        1 tttttcaata tcacctaatt gtgataagaa atttaggttc ttgaacacat tgaagtatga
       61 ttgtgatttg tctgcaaacc tcaaaatgcc ccatgtgaaa agcaaagatt aattgtacag
      121 tatttacacc ttttcattga taactaacac cataaaactg tacaaattgc agtttgtttc
      181 tttttcccac aatccctttg gcttttaagg gatgttcctc aattagttga actgtgtttc
      241 ctcttgcttg ctaagcactt ttggtcaaac aaggaatggc agaggtccac aattagatca
      301 aaagatcaat cctaatgtac cattttctcc tcaccctcct gctttaataa agtgactgca
      361 gttctccagg ggacaactca aaatccaagt actgatattt ctaaattagc tgactctatg
      421 accttgctag taattgcgtt agtttatcaa tgttcaacac aatttattac tctccaatat
      481 gtaccaaaac gtttatctct caacactaac aatattaaaa acctaaacaa tctgttgaga
      541 aacaaaggac tattcaatat gcataataaa ctggaagaga ctacactgat gggtaaaagg
      601 attaatctag gaagtagtca taagtgaaat aaggaaagat gctgtattac atttagggca
      661 cttttaaa
//
LOCUS       KCPA01003517             390 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 387604tic ultra-conserved element locus
            uce-3473, sequence.
ACCESSION   KCPA01003517
VERSION     KCPA01003517.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 390)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 390)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="387604tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>390
                     /note="ultra-conserved element locus uce-3473"
BASE COUNT          114 a           73 c           76 g          127 t
ORIGIN      
        1 ctcttgatga ctgaagtaca cactctgtgc ggccctatgc tccagccaca ttggtaatag
       61 taacaaagct ttgatgtccc cctcattcaa cagaatgttg tttagttcaa agcgaagaac
      121 agaggcaatt ctttgctttt aaattattag ctccctaagt cttctgtaat gatatagttt
      181 gactgaagtg tgcagtttat taactacata aagacgatat tattagagcg gagaaaggca
      241 gccgaaagtt ttgcctttca gctcagcagc aggggttttt gatactttga tctcaatcaa
      301 tgctaaatgt ctttgtgaga tagagggagc agcagaaatt acctttggca ccatgactac
      361 atcaattatt tagttctttt tcttataaat
//
LOCUS       KCPA01003518             671 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 387714tic ultra-conserved element locus
            uce-2265, sequence.
ACCESSION   KCPA01003518
VERSION     KCPA01003518.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 671)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 671)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..671
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="387714tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>671
                     /note="ultra-conserved element locus uce-2265"
BASE COUNT          203 a          126 c          113 g          229 t
ORIGIN      
        1 tgctgtttaa aaaaaaggct tgcaaaagca gccctctctt aaatcatcca acaatcctaa
       61 attgccaaga cagacatgga tactgctgtg cttaaaacta tttatttaat tcactgccgt
      121 ttggattact acaaatgatt ttaaggtttc tttctcatac attggaaagt tcccctgcca
      181 tttacttcct agccatttgc gtgcaaattc tgcctgtact gggatccctg ccattaaatt
      241 ttcttcacac tgaagggttt tctctgctcc tggcggggcg aagtcatgac ccagaaaaaa
      301 attgattcat gaattctcag ggtgcaacta aagaagagag gaaatatgcc ttggctgagc
      361 tcctactagt gacaatttaa aacctgtaat tagtttggat tcaagctgca aaaggaatct
      421 gaatttaaaa tgcattaatt caaactgata tattaacttt aacaaagtag atcaattatt
      481 atgtagaatc attattacag tctgttttgc taactgttgg attccagact ttattaactt
      541 agattttatt agaaaatgca agtaattgct tgcgaacact tttcttggtg ttttattggg
      601 gttagttagc tttaacacct cagttatgga ttctattttt gtaaattccc atcatccaca
      661 tgctgcacaa t
//
LOCUS       KCPA01003519             386 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 387817tic ultra-conserved element locus
            uce-3346, sequence.
ACCESSION   KCPA01003519
VERSION     KCPA01003519.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 386)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 386)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="387817tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>386
                     /note="ultra-conserved element locus uce-3346"
BASE COUNT          123 a           57 c           62 g          144 t
ORIGIN      
        1 taacaaaacc tgtttcaatt tattatacgt gtctaaccat acaattatca atgcagcatc
       61 ccataactaa tgctgaccca ctttcccaga aaaagatgtt cattgtgcat ttgaaaggtt
      121 aaaaaggttt ttgtggttta aatgttgtta catattttac agcattagga tctatggaat
      181 attttgacaa ctgcaacagt tcaatgaagt tggtaatttc ttcttttaat tatttttcat
      241 tgaacagatt tggagttaaa tttttaagat ttgtgttctg gtatattata caggaacatt
      301 ttgatgaaat gtatcatgca aaactagcta gggattattg ccttattagc ctttaaccat
      361 aaggtaacca ctggcgcata attttg
//
LOCUS       KCPA01003520             458 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 387926tic ultra-conserved element locus
            uce-1826, sequence.
ACCESSION   KCPA01003520
VERSION     KCPA01003520.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 458)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 458)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..458
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="387926tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>458
                     /note="ultra-conserved element locus uce-1826"
BASE COUNT          180 a           86 c           80 g          112 t
ORIGIN      
        1 aatggaaaag agtctctaca ctaaacatac agcaataaaa ccctttgaac taaccaaaac
       61 gtgaatagct tttataatta acaaaaatat agttctggcc cctcaaacta gggtaaccta
      121 atcaaggcaa aaaaattaag aaatggctta ctgttaagca caacacttgt acagtactac
      181 aaaatgcact gtcactaaca aagacattag cggcatgcag aagtgtcacc ttcagaaaca
      241 aaataataca ataaaagaac tgcaaaaagg catttacata tggggaaagg agagagaaaa
      301 agctcatgat ccagtactgt ctgatagttt tggagtctat ttatccacat ttttaatggg
      361 agcaggcaca taaaatggct ctgaaccatc agctgctgtg taattgcagt tcatagaaag
      421 agttcttcct ttccagagaa cttgaagctc aatgaaac
//
LOCUS       KCPA01003521             542 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 388031tic ultra-conserved element locus
            uce-2847, sequence.
ACCESSION   KCPA01003521
VERSION     KCPA01003521.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 542)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 542)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="388031tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>542
                     /note="ultra-conserved element locus uce-2847"
BASE COUNT          177 a          102 c           80 g          183 t
ORIGIN      
        1 gtcacaaaat gcacaaaatt acaaatcagt tttaaggcat acatgacagc aaaatataag
       61 tacacaaaaa ctacattaaa tatcagtttt catttgtccc taccacttca acttacctct
      121 cagttccaaa ctccttgctg cagtgcacag cttgagatag tctaagatcc attttagagt
      181 ggactgaaat ataaatgaca gttcgcacta cacatgaaca tagacaactg tataaaatat
      241 ttaaataaag acagaaaaga acagaggaaa ccaacagagc ctttggcaga cccagccttt
      301 gggaatttag cagcttgaga ttcattgcaa atttcatctt taatgttatt tttagttcaa
      361 tattttgtag cactcagaag taaatctttg tgtgctgtct ctcctcctgc ttgtgttgct
      421 cccttttctg atcttttctt ttaaagaaac ttaatatatt ttcaatacaa ttgatttgtg
      481 acatgttttg tgatatttgt taaagttatc ctgtttcttc atacggttca gtgaaaacca
      541 tt
//
LOCUS       KCPA01003522             675 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 388143tic ultra-conserved element locus
            uce-3718, sequence.
ACCESSION   KCPA01003522
VERSION     KCPA01003522.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 675)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 675)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..675
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="388143tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>675
                     /note="ultra-conserved element locus uce-3718"
BASE COUNT          197 a          138 c          149 g          191 t
ORIGIN      
        1 gaggcacaac gggataaagc gattagccca aactcacaca gaagatcagt ggccaagcca
       61 aaaaacgagc ccagggtttc tggggcagag ctgacgggat catgtgctgc acaaatccat
      121 tacagagaga tgtagtagct ttgtggtctg agctgtaagt tcaatgttca tccactccaa
      181 aaatataatg tgtggagagt tgagtgtatt ttaagagttg ttcctttatc ctcacagcaa
      241 ctagaaagga tggcagcctg ccctgaaata gtaactatca atatatgatg ccttttgcag
      301 ctttccttcc tgatcaaata aataatttgt aaggttttga tgacaaaagg atgtatcctc
      361 tgctcagcta tcacctgcca gcactactct gtgcaatctg atttagagat ttaagcatag
      421 aaatcgtcct ttctgctgtt tcccctggaa acagggagcc cagcggagag gttaatcatt
      481 tgggtttgca attcagagtc ggcaaaatcc aaaataattc cccatcttct gagttttaaa
      541 agatgctgct agacttcaaa ctttcaaagg cagtggtgtt gcttgctccc tgatattgtt
      601 taaaaataag taatttatac acccagaagg tagagtgaag ctccctttgc tctgctgtgg
      661 tacagtcatg catgg
//
LOCUS       KCPA01003523             622 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 388254tic ultra-conserved element locus
            uce-5411, sequence.
ACCESSION   KCPA01003523
VERSION     KCPA01003523.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 622)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 622)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="388254tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>622
                     /note="ultra-conserved element locus uce-5411"
BASE COUNT          207 a          120 c           93 g          202 t
ORIGIN      
        1 cagtcattca caactttgcc tttaattttt ggctaaacag gcaaacaaac agtagatgaa
       61 actaatggag agcttaatta tatctatcca tcaagcccta aatttgtttc ctttccaaat
      121 agcaggcact gtctttaaat ccaaaaggac ttatgcaagg tacccagttt aaaattctcc
      181 cactgtcata gactgtttta ctaattatcc agattccaag gcaatcatac aaccgtaatc
      241 attcacctca cgcctggaaa cataagtctt gttcttttga tgaatattta taagaagtgt
      301 aaagcagtct actttctttt cccttcaggc aagacaattt ggagttcatc aatatgtatt
      361 accaaggact tttataaaag gcacttcaaa ggaaattcat caggcattcc ttttgtcttg
      421 atttctgtta gactgatatt tccttttgac aagtatcaat aaattatcct ctgatggcta
      481 gaaacttgat gtcttattca gaaacttcct cacacagcaa agtctgttct taagtttcca
      541 atgaaatttt tagcatctag cttctaattt aaagatgaag gaggacagaa gaagtaaatg
      601 aagcacaaaa gaatcaatgt at
//
LOCUS       KCPA01003524             502 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 388361tic ultra-conserved element locus
            uce-3243, sequence.
ACCESSION   KCPA01003524
VERSION     KCPA01003524.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 502)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 502)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="388361tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>502
                     /note="ultra-conserved element locus uce-3243"
BASE COUNT          184 a           91 c          113 g          114 t
ORIGIN      
        1 acaaagggag aaaatagaac acatatacct gatagatcat aagacctcac agacgaagtg
       61 agggaataca gaacagcaca attcagatac aggaacgatt aatccaagat taaggaaaac
      121 tgtctaaaca gtttatctcc cagtaataag aaggcgtcac agtttaggaa ccccgtgaat
      181 ggagcaattg tttaaacaca acgaaaaaat gccggcatcc agtagagatg aaatgagcat
      241 ttgagtaaaa tgaaggagca atttaaaagc ttttgagaaa aatcaataga atgccaggga
      301 agagcaggct ttttgagcat tgatgggccc ctaaagctct tcatacattg ttactgagtt
      361 tagcagcagg gaaaagaaaa ttacacagtt tgcaagggta ggcgggaatc aatactgtag
      421 ttagtaaaga gatgctattt cacatctcag tggccagcgg cctgccttca ccagcctgtc
      481 ctgatacctg tttgttaaca ag
//
LOCUS       KCPA01003525             763 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 388472tic ultra-conserved element locus
            uce-3287, sequence.
ACCESSION   KCPA01003525
VERSION     KCPA01003525.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 763)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 763)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..763
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="388472tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>763
                     /note="ultra-conserved element locus uce-3287"
BASE COUNT          224 a          167 c          160 g          212 t
ORIGIN      
        1 ctaggactga tggcctttat gcacggagta gctgcttgta caagacagaa aatcaagacc
       61 ttaatacccc tccttgcccg acacgagctc tcttccccaa tgacaaacca tgcaaagcac
      121 aataggagga aagtgcacga tttctcgagg aggcacacaa agggcaaccg tatatcagca
      181 tgttgatgta tttaaagcaa actattaaat gttttataaa gcaaaggcca agcagcagaa
      241 cactggtgag caaggaaaaa ctggcttgat gtagcaaatt gtatgtcagg gcaaatatgg
      301 ctattacaaa tgattaagca tcgcatgcat gtggcatgtc gatttatctg ctttgctgta
      361 cagatctaag cagagtcaat caaaaggttg ttgagggaga tggaagagca aatgctctga
      421 atttcgattc ctcataagca gctaattggg ttgggctttt tcatccgcga actttgcctt
      481 ttggttcaaa acttcatttt cctctgtcac tccgtaatta ctacttttca cttttcatca
      541 ggaaaaaatc aaaagcacta tattaatact tttgtcaaag gtacacattt tacatctaat
      601 attgtttgtc gacatgaatc cctgagccat ttacttgacc tccctttgtc tctagagtct
      661 tcacatttgc atgagttatt acaatggtgc tgtggagcag aggtaggcag cagccagcac
      721 cgggctctcc atcctcccaa cagccagtta gctgcggcga ggc
//
LOCUS       KCPA01003526             678 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 388586tic ultra-conserved element locus
            uce-7505, sequence.
ACCESSION   KCPA01003526
VERSION     KCPA01003526.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 678)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 678)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..678
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="388586tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>678
                     /note="ultra-conserved element locus uce-7505"
BASE COUNT          168 a          138 c          133 g          239 t
ORIGIN      
        1 aatcagtttg gaaagtttca gttggaggtt tgagattttt atagaatact gttgacagtt
       61 tctcaggtcc tcagctattt tgcttccact tggttataaa tatcctgcca atttgaatat
      121 tcagcctttg gtttctaaag ggggcataat tagctgtgga atttcctgca aactgcttaa
      181 agttgtagag aaaccttggt ccaaactact cggtatattt gctagaaaag cttgtgactg
      241 agtgctctgt atgcttgcct ttttgcttcc acctagaatc cagggccatt actttctgta
      301 accatttcag tgagctgcca tagttttcag tctgtactgt cacctgatcc aagcatgcgc
      361 caaaataccc accgtttctg gctcctgtct gctgaatctg ctttgcaaac ccttagttct
      421 taagcttttg ccgtagccat ggagtgtgct ggacacatgc catcctgctt ccctaactcc
      481 tctattgttt atgtttacta aacttgtaaa tgctacgaca gcatccccat gtgaaattgt
      541 gtggctcatg tgtcaaaaaa ggctgcttgt gaaaatattt gtcagaagaa tatgaatgct
      601 acacattgca ctgcattcag tgttttgtat caacaatgtc atggtgtttt aattgtagac
      661 aattattttg tgttttaa
//
LOCUS       KCPA01003527             647 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 388695tic ultra-conserved element locus
            uce-7550, sequence.
ACCESSION   KCPA01003527
VERSION     KCPA01003527.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 647)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 647)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..647
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="388695tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>647
                     /note="ultra-conserved element locus uce-7550"
BASE COUNT          154 a          132 c          171 g          190 t
ORIGIN      
        1 gtgtttattg atatccacat tcctccattt tagtgcttta gcaatcatgg tgataaacaa
       61 caccataaca atgtcctgtg ggcaccccct gtgctgcaag gtgctgctta aggagtatct
      121 ccagatggaa gctggtttgg ggcccagcac agggtaccct ggaggtcatg gtccaaggag
      181 gcaggtgggc agcaggcatg aagttctgcc tctcatcttt cactctaccc acagagtgct
      241 ggaaagcaca aattctgttg agattaagtt ataatttaag gcagtgaaca tgtgctctgc
      301 tggcagctat aaagattcaa atcataaagt tttacagtgg aatggtttct gtaaaagcat
      361 cgttagaaag gcggaatcgt gcctttaatt cttacgactt atggggctgc ctggtttgtt
      421 ttggttttag tggtgcttag tgggacatga ggtggggtcc caaccccatc tttccactta
      481 aaatcaggcc tttcttcccc agggcctgct gttccgagaa ggactggaga tgatgcacag
      541 ttttctgtgt tcactccatc tatgtgagtt ttgggacccc tatgtgcaga gcttttgaac
      601 tagcaggaag aaagatgaca ggtgtgtgct gcatagttgt ggtgtgg
//
LOCUS       KCPA01003528             561 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 388801tic ultra-conserved element locus
            uce-2506, sequence.
ACCESSION   KCPA01003528
VERSION     KCPA01003528.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 561)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 561)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="388801tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>561
                     /note="ultra-conserved element locus uce-2506"
BASE COUNT          156 a          108 c          146 g          151 t
ORIGIN      
        1 gaaatcttgc tgttgctccg gaactgtctc ttctgaggga gtggtagcgc tgcagtgtca
       61 ctagaaaata ttaatgcatg taaacatttt tcaaaaggca ttacatcttc ctgcacgtac
      121 tttattatat tcccacaaat ctgactagat ttgatagata ggtaaccagg gagcaaggat
      181 gggagaagca tgctagagag ggaaggaggg aaaagggagt gaaataaaca caaacctgct
      241 gtaattcaaa acaaggtaaa atcagattgt gtgctttggc taattttctt attcaggtat
      301 cgatccagtg gctgctccag agtctattag cagtcagcca gtgaaaatat ttcccatcgg
      361 gggctctgac ctgagacggg ggtgaatcta tagcaatttg ttcaaacaga ggaaagcttt
      421 ttcctctgat ttgtattcca atttgcacag cctacagagg ggggtttgca gggtggtgct
      481 tctcaagcgg gaatcaagct tgagccagga aagcctgatt aaactctgag ctgggccatg
      541 tgcctccctg ggccgtctgg g
//
LOCUS       KCPA01003529             731 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 388912tic ultra-conserved element locus
            uce-5291, sequence.
ACCESSION   KCPA01003529
VERSION     KCPA01003529.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 731)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 731)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..731
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="388912tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>731
                     /note="ultra-conserved element locus uce-5291"
BASE COUNT          223 a          121 c          142 g          245 t
ORIGIN      
        1 ttttttgtgt gagaaatagt ttaagactgt tttcttttta ttgcagctgt ttaaggatga
       61 tctaaaagta attacagtga ttgaggcata atgcaattca aaataattac agcccactgc
      121 atataaaact aacaaaactt tctgccttga tttatgggtc ctcttggcaa ggcataaacc
      181 tcaaatgatg cctctgggag caacactcta gataatgtta ggccatttaa aaaaagcaga
      241 tttgtgtagt ctatcaggcc tgagtaactc atagtgagaa attggttgtt atcatagatc
      301 acagatactg ctcaaagctc ttatgaaaga tgaattaatt tcactaatgc tttaatgcaa
      361 acctttcatg gaggaggctg tatggtgata accttactgc ggtctctcct ttctcaatta
      421 tgatttatgt tgtcttttag tagatgaaac tgcctgtatt cacaatccat ctgctggcta
      481 aaggaatcct attaacagag gatctgagaa gagacttaat aatgtaaggt gaaagatgtg
      541 gtatcccctt tctgggatgt gaagtaggat cctgttttaa aatgtagatc actgtgagag
      601 aatatatgtc atctccacct ggttttatgc tggcttacag atgatgtagc agctagtgac
      661 tatttgttaa agttaaagat tgttgctttg aaatctgcaa taaaaagcaa atttctcttt
      721 cctccttccc a
//
LOCUS       KCPA01003530             237 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 389007tic ultra-conserved element locus
            uce-7146, sequence.
ACCESSION   KCPA01003530
VERSION     KCPA01003530.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 237)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 237)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="389007tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>237
                     /note="ultra-conserved element locus uce-7146"
BASE COUNT           63 a           62 c           44 g           68 t
ORIGIN      
        1 cacacaaaca cacccttcaa atatttccac tcccggattc tggaaactca ccttgtgtgt
       61 tctggaagta gtgacgccag aggggtctga tcttgtcctg accgcccacg tcccacactg
      121 tgaagctgat gttcttgtat tctactgttt ccacattgaa acctagagat cgtggcacag
      181 atctcactta aacataactg ggtatttagc aagtagtcat cattgttcac ttaaaac
//
LOCUS       KCPA01003531             812 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 389117tic ultra-conserved element locus
            uce-1591, sequence.
ACCESSION   KCPA01003531
VERSION     KCPA01003531.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 812)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 812)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..812
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="389117tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>812
                     /note="ultra-conserved element locus uce-1591"
BASE COUNT          265 a          163 c          132 g          252 t
ORIGIN      
        1 ttttgatata aattcaattt tatttacgat tgcataagcc cagtattctt caaagcattt
       61 atgttgtgcc ggactgaatt cagtgttgag accaaattag gatgttcgtt cttcactgca
      121 aagctgaagg gatgaagcct gctaatagtt catcttgcta aaaaatactt tatatgatgc
      181 atggtttcct tatatccact gactgtagaa atatttatat gagtttacac agcaagtaca
      241 gaagtttcat ataaaactac tgatccaagc gaaaccctat caaatggtgt tctcttttat
      301 tctctttctg atcctaatgc agcttttaga taatgcaaat agatcacagg ccaaaatgat
      361 ctgacaagat aatggagctt tcattgctgc ctgattaact tggctgtagg gttccacctc
      421 gaccctttcg gcatgatggt cctaattaat aatgattact cccaaaatgt gcaaatggaa
      481 cgataaacga agaaccaact aattaactgc aaccatttct actaatcatt agttaacatc
      541 ccattttgtc atcattacac tgaagcgcat gcaaggacag ataaaacagg gtcagccttt
      601 ttgcccccat aaacctgaca gccatatttt ctttcccaat aaaagacaaa caagtaatta
      661 aactgagagc tgaagtaagg gccacaaaat tcgattactt caatattcca ccggtgggtg
      721 aaacagaacc atttttcaaa ataagtgctg aaatcatccc attcctcagg catacttcaa
      781 aggtgaaatt gttttctttt ctatcagaat at
//
LOCUS       KCPA01003532             535 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 389224tic ultra-conserved element locus
            uce-7757, sequence.
ACCESSION   KCPA01003532
VERSION     KCPA01003532.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 535)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 535)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="389224tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>535
                     /note="ultra-conserved element locus uce-7757"
BASE COUNT          163 a           97 c          117 g          158 t
ORIGIN      
        1 ttcagagaaa gaattggaat gtttgtccat gcagaaaaga ctcgatgtaa ggcgattctg
       61 tcactcacct catcttcata atctttcctt agctccgtct gccttctaac cctgctattg
      121 atcgtgtcat aggctacagt agtccaaggc agggggctga aaacctttcc gagcagcagt
      181 tgccagtctg cctgttgcag cttgaagaaa aaaagcatgc tgtgaaaaca atcagtgcat
      241 ttgctttaga tctaagtgat tccaactagg tcgatgcttc atgctgatgt gttgaaaaca
      301 tttaaaaaat ttctcagagt ttgatttcag ctgaaacatt tcagcatgtg tctgactctc
      361 tgaagttgtt atttctcact aatatagcag acaacaaaag cagtagggaa actggacgtt
      421 tacttgaatg aaggtgggtt gataagctga ggctcttgca aattgagagg agtaccagtt
      481 tatttcagga aaggaaaaag taatcacatt tttatagagt gcaaatgaaa gtata
//
LOCUS       KCPA01003533             588 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 389333tic ultra-conserved element locus
            uce-2009, sequence.
ACCESSION   KCPA01003533
VERSION     KCPA01003533.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 588)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 588)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..588
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="389333tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>588
                     /note="ultra-conserved element locus uce-2009"
BASE COUNT          146 a          133 c          104 g          205 t
ORIGIN      
        1 tgaagtgggg aaagtttaat tgtgctgctg atttccttgt gttccctcca ctctccggca
       61 gaaaccttcc ctagattgct gtcatttcta agtttggaaa caataacctc tccctcaccc
      121 ggccagttca aagagaaggc cacgttctat caaacactcc ttgtatttaa tagaagtctt
      181 tgaaaattgt caagcaattt tggcttctcc ttttactctt cagctacttt tgatttaatt
      241 gtattttcca gcagtttcgg attggaaact taataagagt tctagttaat tttctctctt
      301 gtaattaccg atctcatttt tctgataatt ggccacagca attatatgta tatttactaa
      361 tcacacagga ggctctgcag tcgtgtctat ctgccaccat tgataatggc acacacattg
      421 cagaggtgct tttatcatct tcttttttcc actacatcaa agctatttcg ttccccataa
      481 tgaatacatg catgcatttg acacagttgt gtgctagaga aattgtttgg ctcccaccaa
      541 atgctgcacg ctccgagttt cttgcctgca gcgctggaag gttgtatg
//
LOCUS       KCPA01003534             354 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 389444tic ultra-conserved element locus
            uce-6562, sequence.
ACCESSION   KCPA01003534
VERSION     KCPA01003534.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 354)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 354)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="389444tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>354
                     /note="ultra-conserved element locus uce-6562"
BASE COUNT          115 a           75 c           63 g          101 t
ORIGIN      
        1 tgaaaaaaga acaaacaacc tcttcttaag ttcagtatca aaattcacat ttgcataata
       61 atacatttca aggccattag agaggaatga gagcgaagca aagaaaactg cagagtctct
      121 cctctctttg tcttcctgaa tagagctgag ggatcccact ggagtttctt ttcagggtgg
      181 gaattacaaa gcgctacaac aacagctctt gatcttgtac acctcatgtt ttgggtggga
      241 caattattag gcaaatggaa ggagacactg cagattccca tgtttagcta caaacagctt
      301 tgaacaaact tacttcagat tttcctttta aacacttcta cctcaccatt tcaa
//
LOCUS       KCPA01003535             950 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 389555tic ultra-conserved element locus
            uce-834, sequence.
ACCESSION   KCPA01003535
VERSION     KCPA01003535.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 950)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 950)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..950
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="389555tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>950
                     /note="ultra-conserved element locus uce-834"
BASE COUNT          325 a          162 c          150 g          313 t
ORIGIN      
        1 agaactctcc ccaaaagtct ttaattatat gtctgtgtat caatatgtaa tactttatgt
       61 ttccccagac ttcttttagc tgacacaggc agactttgaa aggagtaaaa tcagcaacgt
      121 aacaatgaaa tgcatacaaa cttcttaaat gtgatggcaa aataaaaagc ttcagtcagt
      181 atgatcagtt aaaaaaaaaa agatagccag caaactgtct atcatgtgat gaaatttgac
      241 agtagggatt atggctttga tggaccagaa cagctaatag aagaagctga catttttgaa
      301 accctgctaa ttaagggttc cttccttaat attaaaataa agtctttgtc tgggttttat
      361 ggttggagaa tcaggtgttt tcattaatat atgccagtca gtcttaataa gcttggaggg
      421 cagaggaagt tattattgag tgaccttcta caaaataagc atgttgctaa gggctctaac
      481 cctgccctgt tcagactgat gaatctcatt tccaatgcaa aagcttcaca agaaatccaa
      541 gtattctctg tgcaatcaca gaaaataatc cttgtgtctc ttgtaatgtc cagaattgcc
      601 acttactata ctactactgt acaatgaata ttacaataca cattattttt ctagcacaat
      661 tgtctacatt tctgaattgt caggaataga aaaacttatt gtccagacac ttgtattgaa
      721 aagtcagctc attttaatac ttctcaaata gtcatctacc ctgttcatga attataatgc
      781 acagaataca tctgacaata cttgctttga aaaagagata tgcctgtatt attacatatt
      841 cattttcaaa tagattttga acagatttta aaccattcat tgaaattcat tgaaacgata
      901 aattcacagt tggattttga ttgactctta atctaatttt acatttgata
//
LOCUS       KCPA01003536             388 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 389665tic ultra-conserved element locus
            uce-4969, sequence.
ACCESSION   KCPA01003536
VERSION     KCPA01003536.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 388)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 388)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="389665tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>388
                     /note="ultra-conserved element locus uce-4969"
BASE COUNT          103 a           94 c           63 g          128 t
ORIGIN      
        1 agaagctggc agaagagaga cctctatagt ccctaagcta tataaattgt gatttcaagc
       61 gttgttccct cccctttctt gcagtagtca ttccatcaat gcaaagtgcc taaactggac
      121 acctggagtg ctttacccaa ctcgttcctt ttaccatttc ttgtgcaaca tcatcaggag
      181 tttccttctc cagatcaaaa gtaaactcaa tggctccatt atctttgggt tttcctttca
      241 gtttcttagg atcttctacc cagagtctta aggcaataga ggatttccta ccatggtctt
      301 cttctgcaag ttccactctt accccagtat cttcagcaaa aaaggcatgg cttaataaat
      361 ctttaatttc atatctgcag tttaaaga
//
LOCUS       KCPA01003537             766 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 389775tic ultra-conserved element locus
            uce-5345, sequence.
ACCESSION   KCPA01003537
VERSION     KCPA01003537.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 766)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 766)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..766
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="389775tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>766
                     /note="ultra-conserved element locus uce-5345"
BASE COUNT          219 a          138 c          158 g          251 t
ORIGIN      
        1 aatttgctca tattaatgct ggaagagagg gttaagtgct atgtggcaga aactgtgtta
       61 gctgttgcaa atcactttgt tcaacagcaa aacgtttgcc tttgaatctc cagtcccagt
      121 tggagcagca acctttcccc tataattaat ttttgtgtgc tgtagtccat tagagaagag
      181 agtgacagcc tctggacaca gattactgtc tttggtatgg cccaaaggaa cattatggtc
      241 ttaattaaag gtggctcaat atgtcagcca ttgtgatagt ttgagcattt ttaatacggt
      301 gtcagtatct aaccacctta aaagaactct ggtagcaaga aaactaagta atttaaaggc
      361 agctcatgtt ctctgtaagt tttgcaggac tgctattggg aatacttgat aatttatgaa
      421 ggcttacacc accaaattaa ttacattttc ctgatgccac atgtcttttt catacaagct
      481 agctctgaat tataagtaac aatattgtcc ttgttcattc cttcagtaca ggagacagct
      541 tactaataac actggtagaa ttcagttgct gtgtgtcatt tattaaacag tgctgcagtt
      601 aaggtggtat atgctcctct aacattgacc ctgatttctg ctgtactgca tctcagttct
      661 gagcctttgg catgggtttt atttgagagc attttttgta gaaaaagtaa gttctgagga
      721 aattaccgat gcagagactt gctgtgatat gcaggagata caacac
//
LOCUS       KCPA01003538             488 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 389886tic ultra-conserved element locus
            uce-7716, sequence.
ACCESSION   KCPA01003538
VERSION     KCPA01003538.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 488)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 488)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..488
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="389886tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>488
                     /note="ultra-conserved element locus uce-7716"
BASE COUNT          133 a          113 c           96 g          146 t
ORIGIN      
        1 gagaattgtt aataaaatca cacttctgcc aggatggaat gtaaatgctg cactaattta
       61 attacacttt ggcgctggga gacactaatg taaatattct ggtgagtagg cctaagacac
      121 ttgaagtaat tacttaaagg cttcctttca aagaatctcc ccctttttat taaatgcctt
      181 ttaacattag cactttcttc ctgacaaatt aaatgaaatt tcattactct ccctgactta
      241 atggcatgag gctgcctgct gcaagtgaga gttaaccctc tctggatgga agacacagag
      301 tttgtgcact ctggttgggt cttggtgtca ccagcatccc cctggatccc catcatcatc
      361 ctcaaatgtg cctctaactt ccgcctcatg tcccagagca tcccatgtat tttcctccag
      421 gtttagggga gcacaggctg aagctgggac ctgatgctag gatcattaag agatataccc
      481 ataaagtt
//
LOCUS       KCPA01003539             898 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 389995tic ultra-conserved element locus
            uce-1127, sequence.
ACCESSION   KCPA01003539
VERSION     KCPA01003539.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 898)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 898)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..898
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="389995tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>898
                     /note="ultra-conserved element locus uce-1127"
BASE COUNT          253 a          199 c          173 g          273 t
ORIGIN      
        1 aaaacatggc aaggttttat gctttcatct ctgcatattt tccattccag tatcccagat
       61 ttactgtgtt ccaagagtta aactgtacaa tagttagaag ttaatttgct ttcctgaaaa
      121 aacaaacaag agaagaagga atttaacctc atatcctcat tctgaaatta gctctattgt
      181 caaaagatga cagctgtatc ctgatttcaa gaatttcatg ttggaattaa gcagcatttt
      241 tgaaaccatt gtgttacttc aaacagatcc ataatggtcc ctcagcaaac cattttcaga
      301 agacttgtgt aagtaagata aaaagacacc atttctgaag agatgctttt atgggctagg
      361 tcagagtgct ctttccatgt tgttcattcc cagtcgaatt tcctaatagc ctatctcctc
      421 agctaacaga tgcccagcct catgtcggaa ccagatcgag ccaccactga gatgatatcc
      481 agctcctttc ttattgagcc gtttccctag cagatggtgc aatgctgcag gcacactcct
      541 tcctgttaat taccagcctt cgctacagat ggaaatgtca gtcagcctca caggtcctgg
      601 ttcctgccat tgcctcagtc catagccctc tacctaggca agatgctgcc aacacacacc
      661 atgtgttttg tgactgctga ctaggcaggc aacaaaaaac aacttagttc atgaatattc
      721 atggaggaat gtttagagtt ctgttcatct gcaatgctta tagatctgct taaaggatat
      781 tgcactttcc gaggagccct gtgccccttg ttttactatg gtgtgggcag atgagttatc
      841 aaagtgcgtt gctatagtaa catataaagg gctattaaat gcctgtcgtt tggagact
//
LOCUS       KCPA01003540             468 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 390211tic ultra-conserved element locus
            uce-3660, sequence.
ACCESSION   KCPA01003540
VERSION     KCPA01003540.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 468)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 468)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="390211tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>468
                     /note="ultra-conserved element locus uce-3660"
BASE COUNT          151 a           99 c           73 g          145 t
ORIGIN      
        1 aaaacctgag gaaccagcct ctaaattatc cgtttgtaat gtttcttcat ttcagctgaa
       61 acaatgatcc cggtacattt tcttttaaac tttgtctccc agtccaagtg gccacctact
      121 ttgttgtcca aatttctcgt gcagttcgaa tcttacaatg tgtaatctca gtagggttat
      181 cagttatgtc atgcattata cagcctccaa tcagcgtagt gggaaacaac attttcattt
      241 aataccagga gaaacagtgg aagtcagcga ttgataccaa cacaatgatg ggaaaaagtg
      301 tccagaggtg ctactcacat aatctcactt tacaacatct tgaaaattca atagaaagga
      361 ctttgctaac aataccagaa tgacatacca ctgattattg ttcctaaagc tcttaacaat
      421 aagaaagctc tctaaatata tctcaaccat ataacagttt gtttcttt
//
LOCUS       KCPA01003541             374 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 390318tic ultra-conserved element locus
            uce-6665, sequence.
ACCESSION   KCPA01003541
VERSION     KCPA01003541.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 374)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 374)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="390318tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>374
                     /note="ultra-conserved element locus uce-6665"
BASE COUNT          119 a           64 c           56 g          135 t
ORIGIN      
        1 tttttttgaa cagcaagatt aaaagtcttt tgaagaataa tgttttccta agttttagct
       61 gacattcaat tttaatgact ttttaaacaa agtaactatt aactgtgcat cgttttatag
      121 tttcctgatg tctgacaggt gtttttgccc atgtgggaaa cagatgctaa taacattttc
      181 cctaatagct cataaataat aagcatttag cattttcctt tgtatactgc tctgtcaata
      241 gacaatttac ttttcagaag ccacaacatt ttcctgtcaa tcagttttag cctcgggcac
      301 ttttcggtga ttagaaaccc ctcagagagc gagaactcca aattagtttt aaataaaaaa
      361 taagaatatt catg
//
LOCUS       KCPA01003542             497 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 390430tic ultra-conserved element locus
            uce-6013, sequence.
ACCESSION   KCPA01003542
VERSION     KCPA01003542.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 497)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 497)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="390430tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>497
                     /note="ultra-conserved element locus uce-6013"
BASE COUNT          150 a          100 c           88 g          159 t
ORIGIN      
        1 aattataact gtatttaaaa catagctact tttactttaa aggtaattct gtgaacagta
       61 ttagacaaaa actacatcag tctgcatata cactgaaaat gatcaaagag aaaaccccag
      121 cccagaggtg ttacagactt acaatggagc tttctgtcag tttaatttgt agacaacaaa
      181 acaggtcaca taaagttcaa gaaatgtgtc aggtcagaag ctgtccccca aagcagaatg
      241 aaactggtga tgttataggt attacttacg gtagatcagg cagcactttg acttggttct
      301 gcttatcgcc atttagcatc tgtaatgtcc tttgagactc agggcatggc tgttgcccta
      361 ttttcttttt ctttgctttc tgtatctttg tctcacgcat ccctatctct cgcaaagcaa
      421 gtgaatagga acagacctgt tgcaattttc ttttgttgca cttgctatga cccacactaa
      481 gtttttaaaa acctaat
//
LOCUS       KCPA01003543             622 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 390538tic ultra-conserved element locus
            uce-5322, sequence.
ACCESSION   KCPA01003543
VERSION     KCPA01003543.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 622)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 622)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="390538tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>622
                     /note="ultra-conserved element locus uce-5322"
BASE COUNT          202 a           73 c          113 g          234 t
ORIGIN      
        1 ggggagggag taattttctc tataatccat gttattatat caaaagtgat agttgaggac
       61 taagagctga aacaatattt tatgaaagta tcatgttgaa gtttttgcag gtttcaaaat
      121 atttaaatat gtaaatttca atgaagagac ttcagatttt ttgatagcct aatgatttta
      181 agcatctcat ttctagtcaa acactgacaa aagatgttca gattgcagtg tgagatggtt
      241 tctatggtta cagttgtttc ctagcatttt agtgacatct tttgtgagca ttggctgctt
      301 cacttatttg tcactaatgt atgtgtagaa ctatagttaa tagccttggg cggacaattt
      361 ttttttctct gaatggtggt attgtttttt agcagcattt ttcaataagg tgacaatgca
      421 ctagaatact aatggtatgt atggtatttt aagatgtcaa gttttcaata aaatggtaat
      481 gaaaattttg catttcattt aatagctaaa tattcatgaa tttttcacag catgatcaag
      541 tgagcaaaaa aataaaggag ctgtataatg tgtaatacta aacatcataa atttaacttc
      601 tttttataga atctattcag ga
//
LOCUS       KCPA01003544             613 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 390644tic ultra-conserved element locus
            uce-3771, sequence.
ACCESSION   KCPA01003544
VERSION     KCPA01003544.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 613)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 613)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..613
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="390644tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>613
                     /note="ultra-conserved element locus uce-3771"
BASE COUNT          195 a          131 c          111 g          176 t
ORIGIN      
        1 cttttccagc ttgctaaacc tttttgctat tcaagtagcc tgatttgcga ggggtagaca
       61 gccactgaac tgcttctgct ttcaaagcct actttacttt ccataacctt cccttccatc
      121 caatgaaaag caactgtggc cttttactaa gtaaatgagc aaatattttc ccagtgttca
      181 ccaggttaga tccccattta attaaactgg ctcattatgt ccctatctga ttagcagagt
      241 agaatcaatt attcaatgca caaacatggc tgcaggagct agaggtgtat acagagctgt
      301 tcatttaatt ccaaggacac taattaggta caaagcaagc aataacttta acaattgcag
      361 gcacaagcat acatgcagta caggacaagg ggcaggcctt cattttctta ataagctgga
      421 ttctcttccc cctaacaggg tcaagaaaaa acagaaagcc agagaggatg aaatgtagat
      481 caagaaagct aagcatccag gaaataaccc ttgggatttg catatgtaat agtgtgctgc
      541 tacttttgta ctttataatc aaacagtagg caattatcca aattattgac agcagatttc
      601 tcatttcaac tgc
//
LOCUS       KCPA01003545             276 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 390745tic ultra-conserved element locus
            uce-5683, sequence.
ACCESSION   KCPA01003545
VERSION     KCPA01003545.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 276)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 276)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="390745tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>276
                     /note="ultra-conserved element locus uce-5683"
BASE COUNT           87 a           49 c           39 g          101 t
ORIGIN      
        1 ttttaatcac atctttcaga cacacattta gtaataacac caccattata tcccataacg
       61 gatttaagat atttttaagg gaaatatgag tttgaatgac taatagttac cttatcatga
      121 agtaggctta taattttgct atctgagtct gcagcgtctt cagttcagtc tcttcgcgca
      181 ttagcacgct gagtatgatt tattatagaa atgttatcat gtgagctaaa caatatatta
      241 ttcaatttca caaaaactcg cctagatttt tctttc
//
LOCUS       KCPA01003546             574 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 390848tic ultra-conserved element locus
            uce-1203, sequence.
ACCESSION   KCPA01003546
VERSION     KCPA01003546.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 574)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 574)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..574
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="390848tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>574
                     /note="ultra-conserved element locus uce-1203"
BASE COUNT          198 a          101 c          130 g          145 t
ORIGIN      
        1 attttgatga ccgcagaaga ccctgggaaa gacagaggga tagggatgac agagatttta
       61 atttttgcag agaaattaat ggaaacaggt ttggaagaga cagaatgcca aacaactgga
      121 tcccgcctcc acatccacgg gtttttgaat attttgatgg ggccacttct caacggaaag
      181 ctgataatat gccccaggta aatggtgaaa atacagagac agaaagtcaa ccaccaactg
      241 cacaggtgca ggatgatcca gaactttatg agaaactgac atcttccgtc gagataaaca
      301 aagagaagag tgacacagaa gctgatatag agagtgaacc agtggtagaa agcacagaaa
      361 ctgaggggac ataatcatca ctcagtaggt aaaagatacc ttttgtaaag ttgtcatctc
      421 tctgtaatag ataaatggct gactggaccg tagcagttca cttttgtctg ccagaattaa
      481 gttaatctga tgttcatgtt catctttcac ttaaataact gtacaactga cttgtataga
      541 acactgttct taatttgaac atggtaggta aatg
//
LOCUS       KCPA01003547             608 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 390961tic ultra-conserved element locus
            uce-2511, sequence.
ACCESSION   KCPA01003547
VERSION     KCPA01003547.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 608)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 608)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="390961tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>608
                     /note="ultra-conserved element locus uce-2511"
BASE COUNT          169 a          107 c          139 g          193 t
ORIGIN      
        1 aggtcaaatt gctttaattc tctataaggc cctgtttttc ttgtatttca gccagcattt
       61 tccagtgcac agtatttttt gctcagtgta aacagttcct tgctgtggtt acacagacaa
      121 atatagcagt tttctcggag aagattctcc ctgtgcattt tttaaccatt tttgggaaga
      181 attgatctat ttgtgcatgc aggcagtagc tgtaaattga agtgacatca tatatattac
      241 tcccattgat ccacttttag actagagcca ggataaaagg aaatggcatc agggaggaag
      301 tatgctcatt taggcacaga tcccagtgtg ataatggagt aataatagaa atcacgccac
      361 tgtcaatcgg ttgctgcatt agtctgaggc aaatttcccc tccaaggagg ctttcaatga
      421 cttcattcaa gtgcaggcag gagcaaatgg gatattcaac ataccagctg tacaacgtga
      481 tttgtgtcct ggtggagggg tgcagtgcaa tgctgtggat actcaagtag atatagctgt
      541 gaaaggtcag tagtcaaatg ctttagtata atgggtgaat ctggcattta ttgcgttttt
      601 taatgtag
//
LOCUS       KCPA01003548             647 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 391067tic ultra-conserved element locus
            uce-7504, sequence.
ACCESSION   KCPA01003548
VERSION     KCPA01003548.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 647)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 647)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..647
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="391067tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>647
                     /note="ultra-conserved element locus uce-7504"
BASE COUNT          222 a          104 c          120 g          201 t
ORIGIN      
        1 aacaaaatca ggtacaactc tgctaaagtt aaatggattg tccctgctta catcaatgat
       61 aaaattagtt tttatgttgt aaaaagaaaa aagaaacgct aacaatttat cttaaaacat
      121 ctacttttgt ttttaattgt ggtagtgttc tgtaaagaaa cacgacctta cagggcattt
      181 tcaggaatag aacagtctat atattaaaag gcagcaaatg attcataact gcttagcggt
      241 caggcctgtg gggccatgct tcccatgtga aatttttttc tgcattgcaa actcttacat
      301 taaattgtga taaatgaaga gcggaggcta ttcatacaaa tcaatgactt tagtgtatgt
      361 gtcattagcc tgagagatgc aggcagcggt cactactata aatcatgtga tgatctgctg
      421 tctgcgactc gatgcaagca agcagatgca ttaggaaggt taaagaatga aattaatctg
      481 tgcatttcct cccctttagt cacctggtca ttaaaatcac atgatccaaa gttaaactag
      541 ctacagaaga gtaagttggc taagttagat gtcacctttc gttaattaaa tattaatggg
      601 attaatttat tcatcatcac atgaaagtaa aatatataga ataggta
//
LOCUS       KCPA01003549             629 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 391179tic ultra-conserved element locus
            uce-3856, sequence.
ACCESSION   KCPA01003549
VERSION     KCPA01003549.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 629)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 629)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..629
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="391179tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>629
                     /note="ultra-conserved element locus uce-3856"
BASE COUNT          195 a          134 c          119 g          181 t
ORIGIN      
        1 aatgatttcc caaattttgc atgaaaaatc acattgctcc ctgtcttcat gttatttaat
       61 gactattacc ataatgagag caatgggagc aattcatact gtagacgaga ctgtattgat
      121 taacagctaa aatggtagct gtaaatattg ccaaatacac tacgtccagc tacaatcaca
      181 ctcgttctgt gtcaatccag ctgtgagatg atggatagaa agtaaaaata aaatcaccaa
      241 cctcagaatg ctttcgccaa atgtctatgt tctttcgctg ggctttcgag aaatggtccc
      301 aagctttttg tctggtagaa gcgttgaaaa cggcgacaat ctgctcaact ttggtgaaca
      361 aggaagtcaa acaagacaag caatttatgt tgtgatcact atagagaagc aaagcaaaga
      421 cactaggagt ctatggatga tgtcattact gaaacaacat catcaatatc catccaatga
      481 tgtgtctttt gtacttacat tgtatcaatg ttggagatgt ctcccttcaa gtctgcctcc
      541 ataactttca ccaagaacca gctgcttccc cgtgatgtct gctaccactc cctgtgctgg
      601 cacacgcatg tgtgtgtgac catagaaat
//
LOCUS       KCPA01003550             702 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 391289tic ultra-conserved element locus
            uce-3783, sequence.
ACCESSION   KCPA01003550
VERSION     KCPA01003550.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 702)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 702)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="391289tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>702
                     /note="ultra-conserved element locus uce-3783"
BASE COUNT          224 a          120 c          120 g          238 t
ORIGIN      
        1 cttaattttt atgttctgaa gtcactgaaa atgaggaaaa tattgtcact ttcattggat
       61 gactttcttg ggttttaaca cattaatatt tatgctgctc aattgtctat gttataaata
      121 gcctctcaga aatctctgtg ggtccctttt tagttcagat atttaaaaca taagtagcct
      181 gaaagcagct aaatatcagt gctacatgca acttcatcaa aagacagaaa gaaggtgctc
      241 aagcactgga tcttctcttc ctttcaggaa agagttaaca caaagaaata aaatcagata
      301 tgtgtagcct ccagacgtcc attaaagtgc agaatgctgt tttctatcac agattatatg
      361 ccagatgttc aaactatctc taatcattgc agatgtaatg gagtagaatg ttgcagtttg
      421 tgagtttact ggcattaatt ctgtatactg cacaagggaa aagattttaa atatataatt
      481 atatctcatt aatactcagg ttttatttcc tttcaatgga acaggactta ttaaagcaac
      541 catttaccgc atgttttctt ttagtgtttg gccccagcat aatcctgtgt gcattgtacg
      601 tgtaaatatg tactaacctg agtatgtgga aacacactat ataattccac tggtataacc
      661 ccccatatgc atgagatgtt tttataatgt aaattgacaa gg
//
LOCUS       KCPA01003551             454 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 391394tic ultra-conserved element locus
            uce-826, sequence.
ACCESSION   KCPA01003551
VERSION     KCPA01003551.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 454)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 454)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="391394tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>454
                     /note="ultra-conserved element locus uce-826"
BASE COUNT          107 a          107 c          102 g          138 t
ORIGIN      
        1 aaaattgagc agataattca gtcttccatg cgcccaactt cagcctctgc ctctgcgcat
       61 gaccccagca aagcagccct catggcttag ccctacctat ctgtgtatgc ctgtgttttt
      121 ttttttccgg agtgacttgt ttgtgctgtc atcagccgtt gttttggtaa atggtgagtt
      181 aaacagatat atccaagcgt aaaatctaaa aaatgttccc tgtgggcgcc tggggggtgt
      241 tgtttgaaat caactacata tcaattgagc ggcggcgagc ggatccgatg ataaattcca
      301 gtccacagac gccttataaa ttacattttt ttgttcacga tctagcctca tctcagctcc
      361 ccagaggccc ttagactgag aactatgatt gtgttggaga aatgtttgct cagcttgagc
      421 gatgccatta gtgttacatg tgccaggccg ctct
//
LOCUS       KCPA01003552             642 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 391500tic ultra-conserved element locus
            uce-6635, sequence.
ACCESSION   KCPA01003552
VERSION     KCPA01003552.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 642)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 642)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="391500tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>642
                     /note="ultra-conserved element locus uce-6635"
BASE COUNT          170 a          161 c          132 g          179 t
ORIGIN      
        1 tggctctcag cccccgcttt ttaatcataa tagatcattt tccgatgtca gaggaaagca
       61 cgtttttatt tggcgcacct attttcacat catgggcacc ccctgctcat tattaataaa
      121 tacacttcga tttatcacaa tttgagtgcc acggggagcc tggggcaaaa ggagacaaat
      181 tcttttctta agttgttctg aaaggtgctg ggcttgccga ccctcacccc cattaacccc
      241 gcacagctag tgcgctccta ctgggagctc cgcggcctgt gcagcggcaa actcggactg
      301 atcttgtgcc atctcaatat atttgttcat tatcttgcgc acacacagaa gcatttggaa
      361 atgtactcgg ggcacaggcc aaattgaatc atctgccttc attttccaca cgatctgaag
      421 ctacagctgc tacaacaggc tgtgggattt ttattttcct tccttaacag ctcgctctta
      481 aagtcacagc agtctcattt taaagcttgg gtttgtatct gtgttgtaca aaacgggtgc
      541 atacacacaa agaaattccc agcaactgca cagttctgaa ggaaagacaa agcagaagcc
      601 tcagggagag acataattaa gctattcatc tcagagatgc ct
//
LOCUS       KCPA01003553             623 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 391607tic ultra-conserved element locus
            uce-7596, sequence.
ACCESSION   KCPA01003553
VERSION     KCPA01003553.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 623)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 623)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..623
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="391607tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>623
                     /note="ultra-conserved element locus uce-7596"
BASE COUNT          214 a           91 c          111 g          207 t
ORIGIN      
        1 tgtgttcaag aaaattagtg cagctattta atgtcaactt ttaaatatta agtcttctat
       61 cctgctaact ctttgtttta tttcatctgt cagtgagaag aagaaagaga aggagcgtga
      121 agaactgtgg aaaaaactgg aggatttgga attaaagaga ggtcttagac gtgatggaat
      181 aattccaact taacaacaaa acagcattat taacctgtgg agtcacacat ttatgtagta
      241 gaagatggag caacagtttt ctgtattgtg caactttaca gtagatttca catttgtttc
      301 attattacaa cagcactgta tatacctgtc tctaagtaaa ggaaaaaaat aaggacttta
      361 atccaaagtt tggacaacag atggacttct cagaactttg caaacataat cattgtttta
      421 acccttcttt aaaaaaagat ctgttgatga aaattgcaat gtcagattct attgtcagga
      481 cctgttcctt atttatcgtt agcagagagt ataatacaac tttcaaatgt gaacaatctt
      541 aagatttagc ttgtctttct gctaaactgt tacgtgtatt tatagtaaaa gagaaaaaag
      601 actgtcattt ccttatgagt ttg
//
LOCUS       KCPA01003554             681 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 391700tic ultra-conserved element locus
            uce-4841, sequence.
ACCESSION   KCPA01003554
VERSION     KCPA01003554.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 681)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 681)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="391700tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>681
                     /note="ultra-conserved element locus uce-4841"
BASE COUNT          228 a           84 c          122 g          247 t
ORIGIN      
        1 actgaaagat ataaatcagt tcataaatat gaaattgctt gcatgcttgg ctttttgcag
       61 agtcgagatc taattagtga aaggcatgtt cttgtgaaat accagggtgg gagttgtact
      121 tgcaccttct aggactgggg cctaccttga aatgattata actatatgtc tatttatagc
      181 taaggagaca tttgaaagaa atatttgttt tatttgtata gcattttcat tggtttaccc
      241 taaagatata tgctagatga taataaagta ataaaagatt gttttcacag ctgtttgtct
      301 ttgattacat atttctttga agtattgcag taagacagac tttgaacctg gaaagagatc
      361 aaataatgaa ttgttctgct ttgtgaagct taagaaggga ttttattgtt gaaacatata
      421 gtgcaacata ttttttttct tctaacagtt aaataatggt tgaaagtact atgagatcat
      481 tacagatgga ctagattaaa gacctcaggg ccaaacatta ggaactgtgt tagtactaac
      541 taaaataatt tcttaagttc tgtcattacc aatttatttt tgttttttga accaaaatag
      601 tatttcaaag aaagtgtttt aaatctttta aatattcatt tacttaaagc tagggatgac
      661 aggaaacttt aataactgca t
//
LOCUS       KCPA01003555             699 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 391806tic ultra-conserved element locus
            uce-4114, sequence.
ACCESSION   KCPA01003555
VERSION     KCPA01003555.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 699)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 699)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..699
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="391806tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>699
                     /note="ultra-conserved element locus uce-4114"
BASE COUNT          217 a          146 c          132 g          204 t
ORIGIN      
        1 ccactgccat ggcagagctc atcttttcag gaaagacata attagaaaat cctggcattc
       61 attcagttaa catttgttct aaatgtactt taacaataag gcccattttc ctctagaaca
      121 agacccaggc ttgaggaatg ttcctcctac cctgaccacg aaagcatttg aaagctccca
      181 agtaaattgc tggacacgag acccctgatt gctgtgccta catgactcgg gattgatggc
      241 tctaacaaaa ttacagtttt cctttctatt tctggcatta gtcaaggcta catgtccaaa
      301 gattattcca ccagacatgt tctgcggatg tgatgggatt agccaaattt caaagcttat
      361 ttttgacctc cagcagaaaa ttgagcacat acgctattga agccaactgg gactatagaa
      421 catcaagttg attcatcaaa ttagctcaaa ctgcatgact ggctatggaa gttgtcagct
      481 ataaacctgt caaaaagcca tcagctttaa tgttaaatag agacacaaag taatgttgtt
      541 cagaatttga catttgttgg acttatgcct gctaaaggat gctatctgct ttgtttcctc
      601 ttaaaaaatg tgtagtctga aatacagcct tgagagattg ctggagacaa aaaaaccctg
      661 gttggtagaa atcccagctt taacaaagca gttatgtct
//
LOCUS       KCPA01003556             609 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 391919tic ultra-conserved element locus
            uce-90, sequence.
ACCESSION   KCPA01003556
VERSION     KCPA01003556.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 609)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 609)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="391919tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>609
                     /note="ultra-conserved element locus uce-90"
BASE COUNT          188 a          133 c          112 g          176 t
ORIGIN      
        1 tcactcttct tggtttaaat ttagtgtcag aaataaaatt attaatgagt tgcatattgc
       61 tctatggcat cgagatttcc tgttttaact cccctccctc cgaaagccaa gtatttggaa
      121 ttggggttac tacttcagct gtcactacaa aatacccttc cttttattcc cagcatctga
      181 agttacagaa cgaattgccc ttagcagcag ctcaaagtct gaggtcaaag aaaagacaaa
      241 acctaacaaa gaaattgatc ctggggcacc tatggaattc tataatcaga cccatattct
      301 agacacaagc atcctcagca aatcgcctct gaaatgtaaa aatttaattt gtcaacatgt
      361 ttacatcata tcttcaatca ctgtccaggc agtggcactg tgtggggaca cagggctgga
      421 gacgccaggc acactgaaat gagaagacgt ggactgatta gagttcactc tggctagaat
      481 tgtctcggac agctcagcaa tcagattatt aactctgata ccagatactc tatctcttcc
      541 ctgggattag catgaaaatt ttgatatgga tcgataagca atctttcctt tataaagaat
      601 ctctgcaag
//
LOCUS       KCPA01003557             459 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 392025tic ultra-conserved element locus
            uce-1394, sequence.
ACCESSION   KCPA01003557
VERSION     KCPA01003557.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 459)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 459)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="392025tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>459
                     /note="ultra-conserved element locus uce-1394"
BASE COUNT          148 a           92 c           71 g          148 t
ORIGIN      
        1 aaaagtgaaa gaaaagactg gtatttcagc cattgtgctc cctgctaaag cactgtgcca
       61 actcatcttc caacccatta tatgaaattt aatttaacct gctatgcaat taattcagat
      121 gttcagccta tttttctcat ggcagaatcc ctcacacaat gccttattta aatattaatc
      181 agtcctcttt caattaggac taatttgctt cacagggttt ctctcatctt ctgattgcag
      241 gaaaatggag gtaacttgca acgtttgagg ataattaaca tggtattttt ataatactga
      301 tacatcaaat gggaccttaa tgaaccccgc tgattccatt tagtaaagca tgcctcaaag
      361 ttataatcaa gaggaaagcc attgccatct gtttaaaata ctaaggacca caatttaaac
      421 acagaatagt tatttcttta aactgtccat tgtagggtc
//
LOCUS       KCPA01003558             667 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 392137tic ultra-conserved element locus
            uce-784, sequence.
ACCESSION   KCPA01003558
VERSION     KCPA01003558.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 667)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 667)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..667
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="392137tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>667
                     /note="ultra-conserved element locus uce-784"
BASE COUNT          181 a          160 c          129 g          197 t
ORIGIN      
        1 aggctgaggg caaaattaaa gactcgagtc agaagtttaa tgcctgagtg ctcgttttga
       61 actgtgacct acggtttggc tgggcactaa ccacagcatg cctcatcagc tcctgtcacg
      121 ggtaccccag ggcatacctc cagcagggag ccagctccag agccgcatcc tcaaccacca
      181 gctcgctcac acactactga gaccctgccg agaaatcagc atgcaacccg agaaagcatc
      241 ctttcctctg gaataaaaat taatattact tgtcatattt catgtctgag ctcttttcat
      301 gctttatcct ctgtaatgag ggctaaatta ccaatattag tagattttca tggctagcac
      361 agaaagagct gttaccagaa taaatgtttg cattgcttct gttggacaca ggctttgcta
      421 atgcagcttt gctaattatt tctaaatagg caataatctg catcccctag tgctgggtag
      481 tggattggcc acgtacctgc tatttccctt atttacatgt tttacaactt tatcaactac
      541 actaattaca ctctgaacac tgtttaaaat tttctgttaa tagagataca atgatgcacc
      601 agaggatgtg tatttatgcc ataattacgc ctctgttcct gcgatgcagt ctccaattag
      661 ctgtcga
//
LOCUS       KCPA01003559             550 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 392249tic ultra-conserved element locus
            uce-6270, sequence.
ACCESSION   KCPA01003559
VERSION     KCPA01003559.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 550)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 550)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="392249tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>550
                     /note="ultra-conserved element locus uce-6270"
BASE COUNT          168 a           89 c          105 g          188 t
ORIGIN      
        1 aaagaaaagc ttaaagaaag attattgaag gccatcacat acgccaaagg atttggcatg
       61 ctgtaataag aaaagggatt aaaaaataat ggtgatgatg tccctgtcca aaaaggccat
      121 aagatagtga gctacagtag tcacctgtgt ttgtgcctcc cttctttact ggggacattg
      181 ggctggaaca gcagatttca gctgcttata tgaacaaaat ctttattttt tcttttagcg
      241 tgaaagtgtt acatattctt tcacttgtat gtacagagag gttttcctga atatttattt
      301 taagggttaa atcacttttg cttgtgttta ttactgcttg aagttgagcc tttttgagta
      361 tttacaagaa aacaaactgt actctcccaa ggaaaatatt gccatcattt gtagaccatg
      421 taaccttcaa gtatgtgcta tatttttgtc cctgtatcta atcaaatcaa gaactgtact
      481 ttttgaagag tttgcttttg aaacttgaag tcttgaaaaa cagtgtgatg caattactgc
      541 tgttctagcc
//
LOCUS       KCPA01003560             649 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 392354tic ultra-conserved element locus
            uce-3250, sequence.
ACCESSION   KCPA01003560
VERSION     KCPA01003560.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 649)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 649)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..649
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="392354tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>649
                     /note="ultra-conserved element locus uce-3250"
BASE COUNT          186 a          133 c          151 g          179 t
ORIGIN      
        1 gagtacatat gaccatctcc tgatgtgatt tacatgcaga ggagaaagag attacttaca
       61 agacaatgag aagaaatgca aggcctcttt tggcccaaac tccctgcgca cagtgggttc
      121 ctattttccg tcaaacccat ccagagctct gctgaagaca aagtttcatc cgcatgtgcg
      181 tgagcatgtg tacgcgtgtg ttctaagtgt tttgcattat gtgagctctg accttcagag
      241 gggaacagaa ggaatatttt cccccctgag gctagagttg tcagtgaaat gtctgtcttc
      301 cttaataatt tcaatccggg tgacagggga cagggcattt tgctctgaac gaacgtactg
      361 taaaaactgt cagatagaat ttgtctcaag aagcaacatt tctatccatt cggggtcata
      421 attacagtca tcttatgacc tgtggagcag tttttctcaa ctgaaaaaaa ggagccctaa
      481 aatagctggt ttggtcttct gcagagcttt ggattgaacc taaatggaat ctaacaaact
      541 ctgcagcaga atgctttctt ctgtttgctg gctgcatcca gaaaaaactg tgcactgaag
      601 tgacgtagca gaaaagatag aaattgccat gcactgggct ggagtaacg
//
LOCUS       KCPA01003561             510 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 392468tic ultra-conserved element locus
            uce-6079, sequence.
ACCESSION   KCPA01003561
VERSION     KCPA01003561.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 510)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 510)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="392468tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>510
                     /note="ultra-conserved element locus uce-6079"
BASE COUNT          139 a          115 c          107 g          149 t
ORIGIN      
        1 tgcattaatt aggctgaata ctgacttaaa aaagtaaata attcaaggcc attcctttaa
       61 tgattgaaag ttactgagtg tcagccaaca ttaatttata tatgggcata tgcataagaa
      121 cttaccattt tcactgtcgg acttgttttc atgttcggta tcagtcagag tgagggctga
      181 gttggaacgg ctcgacagac aggaactgcg ccctgatttg acccccctgc cccaaagtct
      241 catggcatgc tcgggagaca tcactccttc attttcagta tcagcatctg accctgcact
      301 gatagagtaa cctctgtggg ggagccccat ttccgcacaa aatgccagtc ctcgacgagc
      361 tgctggttca caaactccta actgccttag ggtaaaattc tgtcctgatt aggggaaaag
      421 atgagaaaat tttaattaaa ttgtctcagg tgtgttttgt caaaactcca cctgtgtcac
      481 aatcaagggg attcttttgt ctccagctct
//
LOCUS       KCPA01003562             473 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 392575tic ultra-conserved element locus
            uce-3060, sequence.
ACCESSION   KCPA01003562
VERSION     KCPA01003562.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 473)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 473)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="392575tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>473
                     /note="ultra-conserved element locus uce-3060"
BASE COUNT           91 a          140 c          124 g          118 t
ORIGIN      
        1 gcgctcgcac aggtatcagc tgacgctgct gtgacacgct ttatttcaaa gaagtagcgg
       61 taacaatggc tcacagtaat aacagcgctg ccgcttcccc cgggggaagg cacagaatgc
      121 tatctcgcca catgatctca tttcttttaa gctctgcact aaccgctgac atatcgcata
      181 aatgcctcct ttattacctg ccagtgattg tcttctgtgc tgggaatggc ccccggaacc
      241 cacgtcctca tgccagccaa gctgcctgcc tgtgaatttg tctgtgtctg gcgctccggg
      301 aggcacctga gcatcctcgg ttacggcagt ctgagacgcc tttgttcagg tgcctcgccg
      361 ggggccggca actggcaccg accggggctc tgtggctcta tttgccaggt cggtaatttg
      421 ccattttagt cagcggtgtc cagcaggtaa tgtagcctgg ccacacatcc ctg
//
LOCUS       KCPA01003563             757 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 392683tic ultra-conserved element locus
            uce-7027, sequence.
ACCESSION   KCPA01003563
VERSION     KCPA01003563.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 757)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 757)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..757
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="392683tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>757
                     /note="ultra-conserved element locus uce-7027"
BASE COUNT          234 a          147 c          158 g          218 t
ORIGIN      
        1 tgatgctaca agaggaataa cttccagctt ccagtcaccc acagaaggtg cattgtctgg
       61 tttatgtgct ctgtgtacat gttgattata tattatttac caacatacta actacaaagg
      121 cagatagtta tcatgtttga tagattaatt ttaaagggtt tttgttagca aacaagtctt
      181 agaaataaag cagcccaaat ttggttttgg ctttcccagg gaggagctgc ttgcctcttc
      241 aaaaagaatt caaatgaatt gaaaattcct ttagaactga cagcccaagt gtaagaatga
      301 taaacggctt tggccttgat gatttttatt aagcactaaa tgtcacattt aacctgcatt
      361 actgaaagca attacccatg tatcaacagt caagcagtgc agagctagac gcctgaagca
      421 gtagcattat gctccatctg ggaataagga ttttcaatta gaaggcaaat agctggagag
      481 gggatcaagt cctccagtgg ctcccaaagg aggtctatga gaagcaaagt cttcatatcc
      541 aagtaatcgc aggcaatgtc aacagagcat tccaaaccat ctgctgccag agtagcgttt
      601 actttatcaa atctcaatat ttacagaaca ctgatcagct tgtgggacca ggatggctca
      661 ctgccagggt gttctgggaa attcatttta aggtgtgttt cagtaggcta attaatttac
      721 aagcacctgt ttcatcactg ggagctgtta gcacacc
//
LOCUS       KCPA01003564             517 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 392779tic ultra-conserved element locus
            uce-3527, sequence.
ACCESSION   KCPA01003564
VERSION     KCPA01003564.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 517)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 517)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="392779tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>517
                     /note="ultra-conserved element locus uce-3527"
BASE COUNT          192 a          112 c           77 g          136 t
ORIGIN      
        1 atagatgctg ggtagcttat gtgctataca taaatatgaa ctatctgtac atgtttgcat
       61 atctagtaac tcagaagaac aaagtaaaac ctgacgcttt taataatgaa gtaaaaacca
      121 agactgaaca ctggcaacaa ccttgtgtac aaactattta cagagaacag gcaccacaac
      181 actagtctaa accgtatttc acaagtttca tacatcacaa aaaccccttc cattataaca
      241 cagaagtgat attaccagac aagcatcagt gaagaatact gccttttcta aagttgttat
      301 tgtacaatgc cgtagataat gcagcccatg caatacaccc aagaacacta cagtcctata
      361 cccaagtaca attaaagcag ccctccaaga gtggttccag ctaccattta agtctacagc
      421 agccatgtta ggtatggttt tccatgcaga atggttacat ttaaaactaa aaattaattc
      481 ctaatattct tctgaacttg gaacacacag aacataa
//
LOCUS       KCPA01003565             678 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 392889tic ultra-conserved element locus
            uce-3662, sequence.
ACCESSION   KCPA01003565
VERSION     KCPA01003565.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 678)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 678)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..678
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="392889tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>678
                     /note="ultra-conserved element locus uce-3662"
BASE COUNT          238 a          122 c          116 g          202 t
ORIGIN      
        1 gcactttagc ccatagaaat tagagatatt aaacctcaat cattgcctag gattttgcaa
       61 tgcagattca cttctgggca caattttaaa tggcatatag tatttcctcc aaattgtatt
      121 agataaagtc atggactatt acactgttgt cattcatctc attttgatga aaaagcaatt
      181 acttatggca gattaatgca aagactggcc ataatcacag taggttaggt tgagagttta
      241 ttagaaaaac acaagccatt taaattaacc caaatgacca gcatgtcagt tcaaaagaaa
      301 catgtgcttt aatttgttaa actgtaacct ttgctatatt agaaaaatac tttgacacaa
      361 acactttaca aatgtcagca gaaaatccat actccatttc ttcacattgg ttttgtgaca
      421 cagtgtttgc tgatattcgt caagggataa gttacgattg atttccttcc acccttactc
      481 ttctcttgta ttatggggaa ttaaagggca aaaatgacct gcccagacta ttcatatgga
      541 tatgatacca taggtaaact taactgctgc ctggaactta aaggtcaaca tttcaacggt
      601 aacagagaag gccagagcat cccaagactg aagagcaaaa gtaatgaaga aaacaggaga
      661 atacttgatt taaagaat
//
LOCUS       KCPA01003566             751 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 392995tic ultra-conserved element locus
            uce-2655, sequence.
ACCESSION   KCPA01003566
VERSION     KCPA01003566.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 751)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 751)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..751
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="392995tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>751
                     /note="ultra-conserved element locus uce-2655"
BASE COUNT          224 a          132 c          177 g          218 t
ORIGIN      
        1 acccccaggc ttcccaacag ctctttccag caggagctgt ctcggagctc ttagcatcac
       61 caaataattg aggttgtcac atctcttgtt cattgttttt tccaggcctg gaaaaaatgc
      121 aaatatttca ttgtagtcat taattttccc atccttttct tcaagcatct cattggtttg
      181 atctgatgaa aagggctgaa ggcattattg caaacacagt ggcatccagg ttctgcctat
      241 agtggggaag aatctcatca gataaagtct cagggaggtc atcaatcaca gttgctgaca
      301 accattttgc cttcgtttgt tacagatgtg aacatgctta attatttgta gtgtaattag
      361 ttcatgaaat gtcaggaaat gtcaaactgt gttcacagca cagatttttg cagcaaagag
      421 caatgagagc aagtgtcagt gggagacatg gaggactgat ggggggaact gtgtctgcag
      481 gcaaatgagg gaaatggctt gggggacaaa tgagggtcaa aatattaaga ttaaaatttt
      541 gaaagggaga ccttcaaggg agccgagtaa agtgggacgt gaatgatgtt actatgcagc
      601 agcatttcaa gcacatgtct ggagtgggaa gagggaagtt aaatcaatat ttactcttgt
      661 tttaatttga tttgtgtaaa cattggcttt tgacggcaga tctttagaag aaattcagca
      721 aaattctacc cacaagtctc tgacactgaa a
//
LOCUS       KCPA01003567             707 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 393101tic ultra-conserved element locus
            uce-6110, sequence.
ACCESSION   KCPA01003567
VERSION     KCPA01003567.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 707)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 707)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..707
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="393101tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>707
                     /note="ultra-conserved element locus uce-6110"
BASE COUNT          218 a          138 c          128 g          223 t
ORIGIN      
        1 ctgttccctt cctcatatca atttcaaaga gccaggaaat aagactagat acgcatcatt
       61 ctagctacaa aataaccaaa gtaaaagcaa tcaagcaaca ataagaccac attacacaaa
      121 tggaacatca tgctctcatc tggtttaact attacaccaa gttttaactg ggatgttggt
      181 caactttaaa aaccgtggta aatgtgaata tgtagttgaa atagtttttt cctaattttt
      241 tttcctctct atgctggata ttagaactta gagctatact tgttacaata cagtgttgca
      301 catctttcta ctagaaaaaa ttaataaaga tcctttaccc gtctctttaa gttaaacgtg
      361 tgacatcata aagggtgtca aatggctgga tggttttaca gtgcacactt attatatact
      421 gtaatatgga gttttgtcct tgacagatct gatggtgttt tctacattat ttcctttctt
      481 cacctcttct tcggtggatt agctgtgcga ggtggagtga ctggacgccc agaattcagt
      541 ccaccatact ggtacttggc tttcttttca gatggtttca atatcttaga gaaaatagag
      601 aagttccttt gagtcagcaa caagcccaca tgaaaccttg ttcagcagga acaagaggac
      661 gaggacgggg gggaaatcac atcacaaccc tattattagc tctacat
//
LOCUS       KCPA01003568             732 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 393214tic ultra-conserved element locus
            uce-1561, sequence.
ACCESSION   KCPA01003568
VERSION     KCPA01003568.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 732)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 732)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="393214tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>732
                     /note="ultra-conserved element locus uce-1561"
BASE COUNT          208 a          124 c          157 g          243 t
ORIGIN      
        1 agatgttgat gcaccaaatg gttacaaaga ggtttttttc tcacagcatt ctgtacactt
       61 aatgttttta aaaatttgtc tcattccaac ttgagttatg atgtgttatc acacctttaa
      121 atttaatggg gcttgcaaga tcatttagct ttcctttcat gcacacatta atgtttcata
      181 tttatttttt cctcttcagg tgcaatctag ctcctgtggt ggagtttgct gccgatgtgg
      241 gaactaaatc tgattttatt accatgaacc catcagttgt acaaagagca tttggaggct
      301 ttcggaatga gagtgacaga gaaaaatttg tgcatagact atctatgctg aatgacagtg
      361 tcctttggat cccagctttc atggtcaaag gtggagagaa gcatgtggag tgggttaatg
      421 cattaatcct taagaataaa ttgaaagtgc gaaccgccta tccgtcactg agacttattc
      481 atgctgtcag agggtaagtg tatggaaaag actggtctgt cctcagcaca gtggtaagca
      541 gaattcctag caggcagatg gtatttcccg atgtaatgga ttgcatttat gacaagtttg
      601 tttggtagta aatgctgtca tttagccagc tctgcagctg aaatgcgcac agtaaatttt
      661 cctgtatcat cattgtgata agataatctt aaaaatagtc tgaattcagt acaatgaaag
      721 tgttacatgt ct
//
LOCUS       KCPA01003569             334 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 393320tic ultra-conserved element locus
            uce-6174, sequence.
ACCESSION   KCPA01003569
VERSION     KCPA01003569.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 334)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 334)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="393320tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>334
                     /note="ultra-conserved element locus uce-6174"
BASE COUNT          105 a           57 c           66 g          106 t
ORIGIN      
        1 aaaaaatgat aagtaaaaat tcctgagtca attgattgtc ttatgacata atgtactata
       61 catccactat gtcgtatgaa aatgttaacc caatattttt aggctggtgc atggcctcta
      121 actcaggctc cttcttctac atttgcaatt cctcaggaac tggaaaaaag tgtacagatg
      181 gtaggttagt aggaggcttc ctgtaaagat gtggaaaatg taaaataact ccaaatgcat
      241 gagctgcttc attttgattg taaatgatgg ctatcatgtt tccagtcagt gtggaagggt
      301 catccaaata ccttactgca tgtatttgca tagc
//
LOCUS       KCPA01003570             720 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 393431tic ultra-conserved element locus
            uce-6482, sequence.
ACCESSION   KCPA01003570
VERSION     KCPA01003570.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 720)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 720)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..720
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="393431tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>720
                     /note="ultra-conserved element locus uce-6482"
BASE COUNT          212 a          152 c          124 g          232 t
ORIGIN      
        1 ttacaagctg agacagaaaa caatgtttcc attcttcaag caattaatta ttgtgattaa
       61 tgtattcccc cttctctaag cacaattctg ccagacagag tcagcccatt gacatattgt
      121 agaattataa tgcatatcta attaaaggtg acctgaaaag gcaaggtgtt tagccttccc
      181 tgtcaggacc aagaaactgt taatcagaaa gtgcttgccc accccacctc ccttttttta
      241 tttttgtgct aatttcaaat cttctccctg catcagtgag cagatgagat cttcagccag
      301 ctttcatctt tcagaaaaat gaatagtgca gaaagaacat tatcaaatga gctgttgaag
      361 aagtcagtga atatgtcatt gagtgtgact gcttccagaa tgaatttaga tttatctctg
      421 ttatctcccc tctcccgact cactctccac actctgcttg ctctcagtcc acatgtcaag
      481 cagggtgggt cataatgaat cataagggac agttacttgt agaatggtga caggtccaat
      541 tgtgatacaa cttgttctgg aattaagttt gttaacatta taaattgtct cattcgacca
      601 gaggtttaaa cacctagaag cttttatgca tgcaatttct taaagtattt ctttcccatt
      661 aggcagctgc tgctttacag tattccacaa atgaaattgt tttatcacat caatagctgc
//
LOCUS       KCPA01003571             579 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 393540tic ultra-conserved element locus
            uce-178, sequence.
ACCESSION   KCPA01003571
VERSION     KCPA01003571.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 579)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 579)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="393540tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>579
                     /note="ultra-conserved element locus uce-178"
BASE COUNT          175 a          134 c          119 g          151 t
ORIGIN      
        1 tctctaaaat gcctttccct gtggcttaaa gtaaagattt tttaaataaa ttaatacagt
       61 ttatgttggg catctaccac ttgaagggct aatgattatt gactaccctc cagcagacat
      121 cagggagtct agcctcaggc ccttcccgct cgcccccaaa catgccgaat gttaacacat
      181 gtttctagat cctggctggg attggacaca aacaaggcag tcagaatgga ccatttagtg
      241 tacaagccaa gatgacagat ctctgcttaa tacaaggaag acaaaaattc gtatcttatt
      301 gaaaaaggca gaagagcccc gggtgctttc gctttgtgat tctgcagcaa aaagtgggtt
      361 gtgtcaatat aagtctatgt cacccgctcg cagctgccac actgaattga ccctgctagc
      421 tgcagacaga aaggccttcc atttccaaac tctctctaat gctcatctgc gagagtgagc
      481 atgaggtgga acaacaagtt actcataagt atgggagaga aaaacaaaaa tgtcttaacg
      541 ctgtgagatt ctccccactc actgtttcta atgaaacac
//
LOCUS       KCPA01003572             645 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 393647tic ultra-conserved element locus
            uce-6940, sequence.
ACCESSION   KCPA01003572
VERSION     KCPA01003572.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 645)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 645)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..645
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="393647tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>645
                     /note="ultra-conserved element locus uce-6940"
BASE COUNT          208 a          117 c          126 g          194 t
ORIGIN      
        1 gaagctgctc agggagaagg tgtccataga attggtcaaa gataaattaa aattaataac
       61 tttcagtgta ggtcaccttg tgtccttggt aacccttttg gtggtggtga catcagactt
      121 tggtttaccc ggctaaataa accatttttt ctgtattccc atacccatcc ttcatatttt
      181 attggctata cagtccgcag aagacaccaa agccttagca acaagatctt ctgatgtaca
      241 aacaaaattc atttaatttg actcagtgta ttacaagcat tataatccct cttctgattt
      301 caacatgatc gactaatctc atctgctcag agggataagc cttgtctcag ccatgatgac
      361 aggcttagag aatgataaaa attagggcat tctcacagat tatatactgt aacaacagat
      421 aaggcttatg aataaaggat tgactacagg tggctatttg tagaaatgta ctagattaag
      481 gggttaatgt tagagaagta caatgtcatt tgtagttaaa tcatagatac acacaagtgt
      541 gggaaaatct ttctcgcctg tgtaaacatc aggggagatg aagcaaattt catagctcgt
      601 ttcacaagca gtcagaatga gcaagtacat tttcgggata accct
//
LOCUS       KCPA01003573             568 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 393759tic ultra-conserved element locus
            uce-136, sequence.
ACCESSION   KCPA01003573
VERSION     KCPA01003573.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 568)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 568)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="393759tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>568
                     /note="ultra-conserved element locus uce-136"
BASE COUNT          163 a          124 c          129 g          152 t
ORIGIN      
        1 gctaaattgg cctcttgtag attctgcgag tcaacaactg gctaagcagt ttaaacctct
       61 aagtaaggca taaacgttat aggcaaatct aatttaagct tttaaaaata ttatgggcag
      121 gtgtttaagt ggcaggcaca ctgggagggg gctgggcgcc gcttcccagg cgggttttgt
      181 tcagccagga gaggccaaat aaacagcatc tggggatttt caattacaga ccttcaccca
      241 gcatgcctgc actgtaatct ctaccagatg aggctcaggc ctcactattt tcaataattc
      301 acacactgtg tacacataac atgacaataa gggcattcat gcaaccgcct gattcgcaca
      361 tcaaagctcc caaatggcca gctgtaagca tgcttactgc tgaataattc attcttttca
      421 caggcttgaa aaaacgctca gcgggagttg gcaagcttgt gttctttcct gtgtggtatg
      481 ctaaactcaa attttgaaag aggtacagag agtcagagat acaactattt aaatgtgcat
      541 ttgcgagcat tcggatggct gctcacag
//
LOCUS       KCPA01003574             653 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 393870tic ultra-conserved element locus
            uce-4754, sequence.
ACCESSION   KCPA01003574
VERSION     KCPA01003574.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 653)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 653)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..653
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="393870tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>653
                     /note="ultra-conserved element locus uce-4754"
BASE COUNT          188 a          124 c          158 g          183 t
ORIGIN      
        1 gaagtcaact gctaccgctg cggcgagtca gggcaccttg cacgggaatg cacaattgaa
       61 gctacagcct aattattttc ctttgtcgcc cctccttttt ctgattgatg gttgtattat
      121 ttttctctga atcctcttca ctggccaaag gttggcagat agaggctact cccaggccag
      181 tgagctttac ttgccgtgta aaaggaggaa aggggtggaa aaatcaactt tctgcattta
      241 actacaaaaa tgtttatgtt tagtttggta gaggtgttat gtataatgct ttgttaaaga
      301 accccctttc cgtgccactg gtgaataggg attgatgagt gggaagagtt gagtcagacc
      361 agcaaaaacc ctctctgggt tacagggaag tgatcctatg caggaggtgg aagtgtctaa
      421 acttcctcat ttttatttta ttacaaaggc cttggattgt ctgacctcag tagctgttaa
      481 caccatctgc atcaggccct acctagagca tatagctgag tgggagtaaa caaacaagat
      541 gcacatgcct gttaatggcc atgagagaga gagagaaatc tgaaataaat ctaaaagaac
      601 agtaattcag tcagtgaatg ttaatgttgg agatacagaa cgcaatggga agc
//
LOCUS       KCPA01003575             687 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 393981tic ultra-conserved element locus
            uce-3845, sequence.
ACCESSION   KCPA01003575
VERSION     KCPA01003575.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 687)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 687)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..687
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="393981tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>687
                     /note="ultra-conserved element locus uce-3845"
BASE COUNT          248 a          137 c          112 g          190 t
ORIGIN      
        1 tttttaaggg tcttagtgcc accttttcag cccatttgct cttttcattt accaagaaca
       61 cagaggaaat aaaaaacaga acattcctaa acaagacatt cttacacatt acggaaatga
      121 cataacaaac accaccacag ttcaacaaag cagttatgag ccctgtagct ttttaagaca
      181 ttaaaaagaa gtaaagaaaa ctcagatatt gcatgatctc aagctgtata aaataaaagc
      241 tgctaatcta ctttccaagt gaaacattgt aggtgattgc tctaacctgg ggcacagtac
      301 attctctcta tggcatcgtt gtcacaggaa tcttcaacct ccctccacct gctaaaatac
      361 gttagctgaa tgtgtcctaa aaacaaaacg acaggagaaa tcaaaacatt tttcccttcc
      421 attttctgca gaagtgaact gtaattactc cttttgtagc taaaaacagt atcattaaga
      481 ataatggcat cattaagtac tagaagctat tactgggggt gaatttgctg cactgataat
      541 gaagctctag acaggaaatg aagatactaa ttacaagata aaacgcctac tcagttaatt
      601 ggaagcaaca gcgaataaaa agaaatgcat ttgcaaaagt tcctgacctc tatcattcaa
      661 taagatgttg tttgggttca aatcacg
//
LOCUS       KCPA01003576             500 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 394090tic ultra-conserved element locus
            uce-4005, sequence.
ACCESSION   KCPA01003576
VERSION     KCPA01003576.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 500)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 500)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..500
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="394090tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>500
                     /note="ultra-conserved element locus uce-4005"
BASE COUNT          153 a           86 c           78 g          183 t
ORIGIN      
        1 tttgaataga aaagtgcatg gttttagaca agtgcccatc ttatttttca gtctcctttt
       61 cctttgctgc tgagaatcac acaatgtact tccctgccag ttactaaaat gcttctaaaa
      121 acttgaagaa ttttttgaaa aagggcattc ctattcctta tgcataaaac atgcatgcat
      181 attcatataa aacatttaga aaaatttgta ccagttataa ttagcatgtt ttgtgcatct
      241 attttctttg ctattaaata acaaatttgt ggtaaccata gcaactggaa catcacatga
      301 tactggtgct attttgggga taacataagt acctttctta aagaagcatt cacacctctg
      361 agctatggat tttaataatt ttcacaataa agtatttcat gggtagattg tattcattcc
      421 tcactttaat gttgatttaa cgtggaatgc acttgcagtg cctatgacca cttaaaagct
      481 gtgatgagtt ctcttgtttt
//
LOCUS       KCPA01003577             783 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 394200tic ultra-conserved element locus
            uce-287, sequence.
ACCESSION   KCPA01003577
VERSION     KCPA01003577.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 783)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 783)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..783
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="394200tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>783
                     /note="ultra-conserved element locus uce-287"
BASE COUNT          247 a          153 c          143 g          240 t
ORIGIN      
        1 tttttcatct ttcacacatg aacttctctg ccttggtttt attaaatgga aatgctacat
       61 aactattgca aggagactct ctggaccaga agcattaact agctcaaatg agaaatacaa
      121 gctaaaaagc tgtctgtcca ttttggaaac atgcagataa tgtgtgtgtc acttgaaatt
      181 cacatgcatt tgggatcggc aaagaaaagt aatatacagc aatgatatct ttgatcatcg
      241 aaagaactca gaaacatagg aactgtgtcg agtgtggtta tcatcaaccc attttctatt
      301 cccagtgtac aaatcatttc atgcattcta caacccaagc cacgatgctg ggcttcaaaa
      361 gcaatttcag cagcaaaata aggtgctttt cttcaatttt caagccattt gtacgaggtt
      421 agtgttgttt acccacctgg tacactgata tttacatacc cctttaaaga aaattggtag
      481 gtatgattta tggagtactg taagagcaca attttccatg tagtgcacct aatctgaaag
      541 ggcacttgca aaggtcactc tggccataca aataccaagt cttctctttg gaataagtta
      601 ggatattcat ttttcttgga aaatgtcagc agtaccctac tccaggggtt agtttatgca
      661 gataaatgcg taagccttta atcttaaggc aaaaatactc tgcacaaatg taagagaagt
      721 ccatctatca ctgttaagac ctgtaatttg tttttattta aatcccaagc cagggcagcc
      781 tgg
//
LOCUS       KCPA01003578            1189 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 394291tic ultra-conserved element locus
            uce-2053, sequence.
ACCESSION   KCPA01003578
VERSION     KCPA01003578.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 1189)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1189)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1189
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="394291tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>1189
                     /note="ultra-conserved element locus uce-2053"
BASE COUNT          372 a          242 c          229 g          346 t
ORIGIN      
        1 taccagagag ctgcagtgac actatgccaa aaaagtatta aggtacttga acttcccatt
       61 tcatatagtt atctgcatcc agtcgactct atttttaaag ctgtatacac acgcacattg
      121 ccaaaacaat tgttttaagc agcttcataa ggcaattggt taaattaggc acaccacagc
      181 atttcaacaa aagacagagt tgcaaaagct attttcctac agcatgtgaa gaattcaaag
      241 tgagttcttg atttaccttc tataactgct gctatagcct ttacctcgtg gtgaagggcc
      301 atgtacgaat ctacatgtgt tcccatagag gcagttgcca gtcttcagcc agttacggca
      361 ctgtgtctaa gagacagaca ttactgggtg aatttcacac tcctttctgg aaataccatt
      421 gggtgtggca gaacaaacaa atgactccac attaagtccc atttatctgt aatccaccag
      481 taatataatc gattaaagag catcaggtct ggcagaaaaa atttaggttg gtggaaatat
      541 tatgaatagg tacagtacta ctgctccatc cagaagctgg cacaacacac agtatttgaa
      601 aactctaata ttagcatgtt gaacatcctt gctcagtaac atctgagcat ttggtgcttg
      661 tgagctagtc tttcccgcca cataaatcct ggaaaagaag atgctggggt ggggaggaaa
      721 agaagaacgc ttttacaact cacctctgca gtacttccag tgctgggtcc aagcctttca
      781 aacacactgg gtcttcggga tgtgctatcg gatatggtct tggtattttc cactgtgacc
      841 ttccttctaa tttttgacat tttgtactac ttcaaccaaa aaaaaagcaa aactgtaaaa
      901 tccttcagtt tggggctatt gacactgaac tcatatgaat aaaatacaag agttgctgca
      961 aaggtgatga agaaagaaaa aagtcataaa tgagtgaaat gtatctaata acacagaatg
     1021 cttctgactt gaactagtca gctgaacgcc agtaatgata atttcatttt attttgcttt
     1081 ggattcttca gcttcccttc gggaaagatc atatgacatg ttattcattt acgcagcaaa
     1141 caccacacag gacagatgct ttctttcatg aggtattttt ggtgcacca
//
LOCUS       KCPA01003579             546 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 394404tic ultra-conserved element locus
            uce-4143, sequence.
ACCESSION   KCPA01003579
VERSION     KCPA01003579.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 546)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 546)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="394404tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>546
                     /note="ultra-conserved element locus uce-4143"
BASE COUNT          156 a          104 c           99 g          187 t
ORIGIN      
        1 tcaaatttac tcgcagcttg ctttctaaaa ccaaaataac attactcaat tgctatcaag
       61 cttcataacc atatttaaag gttcagtttc tcctcaagtc taaaatattc attattatct
      121 gctcttgaga caaagaattt attactgcct ccacagttct gcttcacatt tgttacacca
      181 ctcctacaac ttatatgtta ctcgatttaa aaataataca atgctgccat cacctgccgt
      241 tgctgggctg ctgtggagaa tgtctggaat ggtctgaagg ctctgacctc tggtcaggag
      301 atcgtgaacg actgcggcgg ggcctgtcat gtgatcggtt ggaatgatct gatgccagcg
      361 actgaatttc tgaaatgtct gttaaataaa agttgtttca tgaaatgatt ttaattcaaa
      421 tggtggcatg acctgcttaa atgggaataa gctttttttt atgaagatgt taaatctatg
      481 tttattatta catattcctg aaaaaatggc cactttttga acgtgtggat ttcattacag
      541 tcttac
//
LOCUS       KCPA01003580             707 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 394515tic ultra-conserved element locus
            uce-5401, sequence.
ACCESSION   KCPA01003580
VERSION     KCPA01003580.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 707)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 707)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..707
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="394515tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>707
                     /note="ultra-conserved element locus uce-5401"
BASE COUNT          200 a          135 c          153 g          219 t
ORIGIN      
        1 agtcacttaa gaggttatct gggaggaggg aaatcctgag ccagagaaac cggtggtggt
       61 caccttccat ttcaggctgt ggagactaaa atatttcctg ttctgtctca aatgaatatg
      121 tttcaatgtt caattcctgc tttgtggtat gcaactaaca gctgttgtga gtagcgttgt
      181 tactgtattt gtttcatgtc acactttttt ttctttcctc tcctttgctg ttggcttcac
      241 ttctggctcc atcagagaga gctgcaggtc tttgctgccg cttagtagtc ccctgtcata
      301 aaggaatgcc aaggcttact gatctgtctg tcaaaaccaa agatgtctgg gaaattccac
      361 gagaatccct acagttgatc aagagactgg gaaatgggca gtttggggaa gtatggatgg
      421 gtatggagca aaataattac tctaaaatag ctctctgtgt ggggattaca agatggaagg
      481 tgaaaaacat tgtgacccac aagaagcaaa gctcaaactg ttaggaatcc ttggaatcat
      541 gtctttgact ttgaaattct ttaatcttca actttcacaa taattgatgg caaaagaaaa
      601 ctgaaaatcc atgtttcctt ggaaggtctt gattttgaca aattaccact gtcttaataa
      661 taaatcaagg ctcacatagt aatctcttgg ctataccaag aagccct
//
LOCUS       KCPA01003581             542 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 394622tic ultra-conserved element locus
            uce-5672, sequence.
ACCESSION   KCPA01003581
VERSION     KCPA01003581.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 542)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 542)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="394622tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>542
                     /note="ultra-conserved element locus uce-5672"
BASE COUNT          171 a           93 c           92 g          186 t
ORIGIN      
        1 ttaagcagac taaacattcc cacttgcagt cttatttaca ttattaattt gcttagcaaa
       61 tattttttta atagctagtg ccaatagaag gagtggaagc cttgtttgga gagctcttgt
      121 gaagagtgtt attttctcca gttcaagcag atgagcagac tgaaatgtga gttttcaggc
      181 acataataga cccttggctt atcaaagcct cttatctgat tggaaaaaaa atcaaaggta
      241 aacttcacag ctcatggaat taaaagacaa atgagatgtc ataattatca aagtggctaa
      301 tttagaaaat taagccattc acataggtga cataattgct tgtcacaatc actctttttc
      361 tcattagcct tctcttcagt acctaccgta cagtggaaca ttctttagtc ttggaaaata
      421 ttgcctatac tgtaattcct taatagccta gcccctgaaa ttagtgcaaa aatatactta
      481 atagcttcat tgatgtgata tgtttgtgtg attctctgtt cttatgttat aaaatctggt
      541 at
//
LOCUS       KCPA01003582             784 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 394736tic ultra-conserved element locus
            uce-3302, sequence.
ACCESSION   KCPA01003582
VERSION     KCPA01003582.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 784)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 784)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..784
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="394736tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>784
                     /note="ultra-conserved element locus uce-3302"
BASE COUNT          256 a          164 c          175 g          189 t
ORIGIN      
        1 aactttgaac aaacggacac acaggaaatt aaaagtgatt tgaagaagcc cctagttaat
       61 ggaatctgtg attttgataa aggagattgt tctcatttga gcaaaaacat tccaaatcac
      121 aaaacttcca atcatgtagg aaatggtgag atatcttcag tggaacaaca agggaatttg
      181 gatgccacgc agcaagatac tgccaaaggt gatcaagggg aaagaatttc taatgggcct
      241 gtattaactt tgagtagttc acctgttgta agcggtacac aggaggctgc aaaactgtta
      301 acccagcaac ttagtggtac caacactgat ttacctaatg gacctctagt ttcaagtttg
      361 aattcagatg tgcctcagca acgcccaagt gtagttgtct caccacaatc tacagcctct
      421 gttatacagg ggcatcaaat catagcagtt ccacactcag gacctagagt gtcccagtct
      481 accctgtcct ccgaagttcg gtctactaat ggcacagcag aatgcaaaac tgcaaagagg
      541 ccagcagagg ataatgacag ggaaactgtt ccaggaattc caaataaagt aggagttaga
      601 attgttacaa tcagtgaccc caacaatgct ggttgcagtg caactatggt tgctgtgcca
      661 gctggagcgg atccaagcac tgtagcgaaa gtagcaatag aaagtgctgt tcaacaaaag
      721 cagcagcatc caaccacgta tatacaaagc atggtcacac aggtatgttg cagtgttctg
      781 ttta
//
LOCUS       KCPA01003583             580 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 394841tic ultra-conserved element locus
            uce-1702, sequence.
ACCESSION   KCPA01003583
VERSION     KCPA01003583.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 580)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 580)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="394841tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>580
                     /note="ultra-conserved element locus uce-1702"
BASE COUNT          155 a          146 c          109 g          170 t
ORIGIN      
        1 gactgtgttt gcaagccctc cccccagaca ctacagtccc ccgcggtaca gaatggacta
       61 aacatctcag ctctgacttc tgtgattttc aattaaactt ccttttctgc tggaacatgg
      121 atcacctgct ccaccacgct tctgtattat taatttgtta gcttgctgga atcacagttg
      181 aaaacctttc agccttggtt tgtggcgata aattcaactg acagctgaaa tttggaacgc
      241 tcacttaata ttgattctga atgtaataac aagcgacatg accttttgga gggtgtaaaa
      301 tatggctgcc acaacatctg tgccacattt cttgctgtgt agtaatatgc tgtaacagca
      361 cggagctggc actgaagtta agctttatta tcaagcagat ctctccatct ctctggcttc
      421 attcccacag aaccttactc ctcatcccca aaacacttcc cacattgaga actcgtgcat
      481 acgtcactgt ttctgagact taatttgtcc tgcagtaagg aaagagattt gggtggctaa
      541 aagagtcccc ctgtgtcaaa cacaacagtt ccagcagact
//
LOCUS       KCPA01003584             407 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 394944tic ultra-conserved element locus
            uce-7867, sequence.
ACCESSION   KCPA01003584
VERSION     KCPA01003584.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 407)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 407)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="394944tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>407
                     /note="ultra-conserved element locus uce-7867"
BASE COUNT          105 a           96 c          112 g           94 t
ORIGIN      
        1 tccatctgct gggatatttt ccatccctgg caatcatttt ccaagggaaa gcaggcatct
       61 ccaaggaggt gttcggcggc agacggacag actccctaaa tgctacccct ctgaatggaa
      121 gcccttcatt tgtgcatatg caattaagca gccttagaag gaagaaagct ccaaacggga
      181 taaaaggaac ctttaatcaa gaagctgaac ggtctaattc aggataatag aggggtcctt
      241 actgtttgac acaggagggg tgggggtgct ttttgtctct tcgagcgttg gcttcatgat
      301 ctaacgaccc ggagcaaaag agcaggaatg ctggacactg ctacttgacc tccccgtgcc
      361 acggcccagg ggtcgggaag cagaggcagg agtttgtgtc ccttagc
//
LOCUS       KCPA01003585             513 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 395052tic ultra-conserved element locus
            uce-4739, sequence.
ACCESSION   KCPA01003585
VERSION     KCPA01003585.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 513)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 513)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="395052tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>513
                     /note="ultra-conserved element locus uce-4739"
BASE COUNT          169 a           99 c          101 g          144 t
ORIGIN      
        1 tcataatcat ctctaaatct aatgggacac tttcatcaca gatgaaaatc ttcagcgccg
       61 ctcaaatgag aatcaaggaa ttattacaat cccgtggttt ggcttgcagc aggcattaat
      121 cagaaatcac aataaatcca cacagcacac agcacattag tcaggcagtt ttgcatgata
      181 acgacgttga ctaatgggct ccgagttgga agggtcaatc ataaactcat caaatgcttc
      241 atttaatttc ttaatttgga caaacacgat ttgtttatgg gaaagatatc aggtgttctt
      301 gaatgaataa tggctgtgaa accaaagtcc attaatcagc gcttgattac aaatgactcg
      361 gagattgttt gttctaattt cattcatttg gggcaacaaa gagaacacga gcgagcgaaa
      421 gcacttggcc aaaatggcac acttagttct ccgtgtttgc tgtgataaat gggctttcaa
      481 taactaaaac aagggggtta ttacccacat taa
//
LOCUS       KCPA01003586             562 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 395159tic ultra-conserved element locus
            uce-6777, sequence.
ACCESSION   KCPA01003586
VERSION     KCPA01003586.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 562)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 562)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="395159tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>562
                     /note="ultra-conserved element locus uce-6777"
BASE COUNT          179 a          101 c          110 g          172 t
ORIGIN      
        1 caaaagctaa aatgttccag aggacagctt ttgtctccta cacagctcaa agaaactgct
       61 tccctctctt tgctaccttt tgacatgctt aaagcatgga atgattgaat atctgattaa
      121 cttcacataa gaagcatttt tgcccagttt tctgacgaga tacagaacca gtccaaatcc
      181 tttgagtctt atgtaggagg taatcccacg atccaatgtc agaataatcc ccccaagaca
      241 gcttaaatat ttgtagttct ttcttaaatc aaaaaatccc ttggggttta taccaatccc
      301 aatttaaaaa atgacttgac ctgaaaaccc tggaggaatg tttgaatgag gttgtcttgc
      361 ctctggcttc ctggtactct aataagacgt gaataagata tacaaggtcc taatttataa
      421 tgtgatatta aaattataca ttcagtgaaa ggctaggggg aaaaataagg gatggcaatg
      481 gtgatagaga cagcatttat tgtgattact acaagggggc cttagtgggc tgggattatt
      541 gtactttaag tgaaattgat tt
//
LOCUS       KCPA01003587             594 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 395268tic ultra-conserved element locus
            uce-1913, sequence.
ACCESSION   KCPA01003587
VERSION     KCPA01003587.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 594)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 594)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="395268tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>594
                     /note="ultra-conserved element locus uce-1913"
BASE COUNT          116 a          170 c          117 g          191 t
ORIGIN      
        1 ttttgcttct ctcttctttg aaaaatccct taatttttac tctgatctca gggcctaagg
       61 tgccacccca aaataaaaat gtatcctccc ttccccaggt cctgggaagt tgttttcctc
      121 tgccttttgc agtgcaggtt aagccaatgc cagctctggt ctcaggagat gcaaccccca
      181 cttgcctcgc tccgtcgccg gcagcttttt cattatttat ttaatgtctt gtaccgtaaa
      241 taatggtgac tttatggtta ttaggaacgg gttaaggtac atgcgggcag caccaggctg
      301 ccttcaaaag gaacaggccc ggcataaaat gttgcgataa ttgctttact gctgagtgct
      361 tggtctttat tttgtgtccg atttgtctct taagccagcg taacattctc cccgctgcag
      421 gagaatgcag agagcaaatt gaaggtctga gcgtgaacaa tgcaacatgg tgcactgctg
      481 ggtttttctt ttctttcctc tttcttcgtt cctctctcga cctccctcca gtcatctctg
      541 ctccccctcc ccctccagcc tcctctccct ctctgctgct ctgactcttc cacc
//
LOCUS       KCPA01003588             481 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 395372tic ultra-conserved element locus
            uce-3950, sequence.
ACCESSION   KCPA01003588
VERSION     KCPA01003588.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 481)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 481)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="395372tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>481
                     /note="ultra-conserved element locus uce-3950"
BASE COUNT          145 a           89 c           79 g          168 t
ORIGIN      
        1 tcttgatccc ctacacaaca gctccataaa tctgtacttt ccttgcttct ctttcctttc
       61 catcttaaga gttcattatc tcagctattt tcagatggaa taatccaacg tacttctcat
      121 ttgcatgtaa agtgcagtca atgtgaattg atcaaaacca aattaacagc aattggttcc
      181 aatattttcc ctgtttacac attagcttgc tacctttaac atatagatgt attgaattca
      241 gcttagcaac ctgagcatga atgctgtggc ctttaaagag aaacttatct gtaattaaaa
      301 tcatgcacaa gttttagtgg gaatctgttt actagctaga aagaaagctg actctaaaat
      361 ggaatagaat ttagcttagt agttcatgtg tttgattctg aattaaatcc cctaaaatta
      421 cgggacacta ggtttattaa gcttcagatt atatgaaggt tatgtccagt tctgggtggt
      481 t
//
LOCUS       KCPA01003589             752 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 395481tic ultra-conserved element locus
            uce-3050, sequence.
ACCESSION   KCPA01003589
VERSION     KCPA01003589.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 752)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 752)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..752
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="395481tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>752
                     /note="ultra-conserved element locus uce-3050"
BASE COUNT          140 a          238 c          199 g          175 t
ORIGIN      
        1 ggctgcttct cgttacccag gagtaagtgg atagctgacc agcactggtg cccagctcat
       61 gtgagagccc tgccttaagc acttacttgg ttgttgtctt gttcctccca ctccatgggg
      121 cactgaattg gggtttgatg gggtttcagc tctcctttta ggaggctgct atgtcctatt
      181 cccagaccaa aatgcccata agcccagccc tctttcccac atcacgctgg ggacgcgttt
      241 cactggggca gggaggtcac ttgctcgggg cgccagagga aagagaaaat ctctccctct
      301 gcacctctcc tgctgaccct ccctctcttc tttctctccc agttgctccc cagcggatct
      361 gggctgggcc agactctcca tgctccgatc cgggtgagtc ccggcaaata ctggggatgg
      421 aatgggccct ccccagaggt tgttttgatg agaatttctt acaactttca atgcaggtga
      481 gcccatccgg cccatcgacc cggcagcctg ggtgtctcac acggcagcga tgactggcac
      541 ctacccagcg tacggtatga gtccatccat gagcacaatc acttccacca gctcctccat
      601 caccagctcc atcccagaga ccgaacgtaa gtccttgtgc ctccgtgctg cacctgccgc
      661 acggcctcct cactgtgctg tgaagggagc aatacatctg cctggggaca gctggggtgg
      721 gccagatctg ccctgccaag ggactgggag gg
//
LOCUS       KCPA01003590             757 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 395594tic ultra-conserved element locus
            uce-1470, sequence.
ACCESSION   KCPA01003590
VERSION     KCPA01003590.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 757)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 757)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..757
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="395594tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>757
                     /note="ultra-conserved element locus uce-1470"
BASE COUNT          183 a          212 c          138 g          224 t
ORIGIN      
        1 tgcggccggc gggcacacca ctgcacacat cgcgcacggc tgcggctacc ccgccgctcg
       61 cctggcggtg gtcagtcctc ccagctgccc tatccgttac tgtctgatta gctctgcgaa
      121 ggagcccctc cccggccagc tttccccgcc atctgttcca cacgcgatgg ctgccgccca
      181 gcagcctcgc gctgccctcc tacctggcac ccggctcccg gccttacccc aaagtgctaa
      241 cacaggttct cgctgctggc agagtcagga tttcattact actactttga caagtgcagg
      301 gttgtttgta atttctcttt tatcctgatt ttgattgtac aaccacctcc cactgattca
      361 gtttgcttca gttttgttgc tcacagattt tactctccac attaatctcc ctctggcatg
      421 ttactgcatc tgttcccttt tttattatta attttcaaat tcccaccatt tttgacaaaa
      481 aggaggtaat ctacactctg cttctgccca tttcattttc tttaatttgg aagataagta
      541 tgaaagcgtg ccaaagaagt taattctccg ttaacagttt attttctggc atcctgatgc
      601 ctttgtatat gaaaaccaga tagaaataaa tgttgactga atcacaacaa catagtcgca
      661 accgtcccta aatttaatga aaagtaaaca tacgaagcag aatctaaaaa gtttattagt
      721 tatcagagtc ctttcacatt atcacacaaa agaatgc
//
LOCUS       KCPA01003591             716 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 395706tic ultra-conserved element locus
            uce-4220, sequence.
ACCESSION   KCPA01003591
VERSION     KCPA01003591.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 716)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 716)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="395706tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>716
                     /note="ultra-conserved element locus uce-4220"
BASE COUNT          160 a          173 c          184 g          199 t
ORIGIN      
        1 gtcttttttg atcagcagca aaaagacaaa gaccagccct ttaagtcaga tgctgtaaac
       61 tgacctttgg agaaaaacga gaggtttgag cggttttcca caaatgctaa tggcctagaa
      121 aacatgttta cccagggctg ggggaaggct gctgtgctgc taccagctca aaatgtccgg
      181 aatgacactt tcattcacag atgtctttcg tctgtgcctc agaggtccgg ggtcaaagca
      241 gcaccggcag gcaggtaggc aggggcgaaa ggtttgatca gtctgcaatg gctccgctcg
      301 ctctgcgttt gtctctgagg tattgccgcc tgggggggac agtcgggctc tggtcctact
      361 cacttcctat tatccatgtg acttgtctcc gccacgctgg agtcactttg atttgcctga
      421 tgtactgctt gacaaagctg ggtgatggct gagaagtgga tccagctgct ctgaaaagcg
      481 cacacctgac atgccagtcc tggtgcgggc acatcacggg gagcattttt taattcaatg
      541 taatttatgc attcttgcag tcctgtgtgt gcctggcctg tcagccagtg cctagatgaa
      601 ggctgacagt tgtcatccag ggcctgaagg tagcctcaca taatgacaca ttagacatac
      661 taatgatgtt ttcttctggc ataatgtttt cttctcaact ttcctctctc ctctct
//
LOCUS       KCPA01003592             354 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 395806tic ultra-conserved element locus
            uce-2052, sequence.
ACCESSION   KCPA01003592
VERSION     KCPA01003592.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 354)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 354)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="395806tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>354
                     /note="ultra-conserved element locus uce-2052"
BASE COUNT          113 a           71 c           61 g          109 t
ORIGIN      
        1 ctggctttca aatgcatttc aatctctcaa cacagactgc tttcactgca tttagagtcc
       61 caccaaggcc cagctttaaa agctactgat tctttttttc tttagccttc ctcacaaagg
      121 aagggtattt tgtaaattac cagctcgttc agatcaacaa aaggtacttt catagaaagc
      181 cccatttgat tttgctcaaa tttgattaca aggatggaga aaaggaaagg aagtcaaaaa
      241 gaaaaacccc agatggcttt ttcattcatc tcagtgaatg agctttatct gtgccttttg
      301 aaactgtagc agtggaaaag catttctgtt ggcttaaaaa acttgacaaa aatt
//
LOCUS       KCPA01003593             575 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 395912tic ultra-conserved element locus
            uce-1880, sequence.
ACCESSION   KCPA01003593
VERSION     KCPA01003593.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 575)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 575)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="395912tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>575
                     /note="ultra-conserved element locus uce-1880"
BASE COUNT          204 a           99 c          105 g          167 t
ORIGIN      
        1 taacagcata gcaactgcaa gttagaacag aacaagttgg ttaatggact gttaggatac
       61 ttttgctgtg taacacattt agacgcatgt atttaaaaaa caggtggata atccaaatgt
      121 tcagttacta ggacactaac agttatgtcc acggcaattt tgtttctgtt ctttaaacaa
      181 atcatcactt gcaagcacta atgttaaaac cagaaagcca ctctagtaca cagtggctat
      241 aaatgccaaa tcaattttca gcagataata aagtccttta caatcagcaa tacactgttt
      301 tactacccaa aatgtaagct aataatatat agctctgcta aatggaaaat gcagatatgc
      361 tgttaagaaa tgggctggct gtgagatgat ggatcatttc tgccgggacc ttcttaaagc
      421 tatgtgcaaa tgttttgaaa atatcacatg atgtggccat gtgttaaaaa ttacagccag
      481 ttaagttctc tgctaagaaa aatatgtggg caatttatga aatgcactcc aggatggaga
      541 tatcttaagt aaaaccagat tttgaaaaca aaccc
//
LOCUS       KCPA01003594             529 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 396019tic ultra-conserved element locus
            uce-2657, sequence.
ACCESSION   KCPA01003594
VERSION     KCPA01003594.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 529)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 529)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="396019tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>529
                     /note="ultra-conserved element locus uce-2657"
BASE COUNT          129 a          115 c          113 g          172 t
ORIGIN      
        1 tttttggaat gaagagtcct cttctttcag tcatgagatg cacgtgaact gcacaaaatg
       61 cacataactt tttttattcc acaccacctt ctttctgctg atttttatta attgcacaga
      121 aacagagctc cattttcttc ttgtctcctg cttccaacaa agttttatgt ttgccctgct
      181 ataaagatga aaaaaaaaca atatttgctt ttaaggttct cagatacagc acctcactca
      241 ggtgggaatt gctagcagga tcggaggcca accagtggag atcccctcag gcagagcagg
      301 gcatggccag ccgggggggc cagggtggcc ccagtatcgt ggagaggatg aatgtgctag
      361 gcgagatgca gtgagtactg ttacacattt gcaaagtttc caaagtagat atgtttgggt
      421 aattactgtt tggaacatac ttttagttgc ttctctgaca ttctttgctt tgctcttcaa
      481 accgttgtta gctcttctga cttctgcttg ctattctttc acctttgct
//
LOCUS       KCPA01003595             269 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 396122tic ultra-conserved element locus
            uce-7050, sequence.
ACCESSION   KCPA01003595
VERSION     KCPA01003595.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 269)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 269)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="396122tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>269
                     /note="ultra-conserved element locus uce-7050"
BASE COUNT           78 a           64 c           87 g           40 t
ORIGIN      
        1 aaagggcatc aggcagcccc gacccggctg acaggtgtgg ggctcggcag cgcccgccgc
       61 cgcggcggga acggagccgt aattagagca aggaacagaa tgaacgtcag atgaattacc
      121 aggcagcaga tcatatttgt caggaaggat tgcatacata aaaattaagt gacagtacat
      181 gccgaggtaa tgaaagaaaa atgaaagatt tgcctgtaca cagctcgcga gatgccggcg
      241 agcgccgtgc tgcgagcgcc ggcgggagc
//
LOCUS       KCPA01003596             572 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 396229tic ultra-conserved element locus
            uce-5064, sequence.
ACCESSION   KCPA01003596
VERSION     KCPA01003596.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 572)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 572)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..572
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="396229tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>572
                     /note="ultra-conserved element locus uce-5064"
BASE COUNT          162 a          114 c           81 g          215 t
ORIGIN      
        1 tccccaacaa ataactgctg catttccagt cactcaaatt tggacagaat tttacttcct
       61 gtttcaaagg tcaaggaaag ctgacctcaa cagcagtgtt gaggctgctg aattattcat
      121 atcattgact ttgtgtcagc ttccacattt gtgcagaggg atgttttatt catttatctc
      181 atttagggac ctgctctgca cctgtttcta ccattaagta ccctgtaatt tgcatttgat
      241 gctaatttag tttcatatca gcctggtccc ctcttgttaa tttaattttc taagaccctt
      301 ttcattacag tagaaatgtt tccctcttta aagcaaacat ctatacaagt aattgtataa
      361 actgcctttt aaataatatc ttttagaaga ttccatcgtt taattcctta attcctataa
      421 ttagccatgg tttgattaat gtttcaaagg gttaaattaa aatgcagaat tactcaaatg
      481 catacttgaa taattttccc tctgctgata acagtttctg cattactgct tttattctcc
      541 tcgtgattct gaatattaca tgtactaaca ag
//
LOCUS       KCPA01003597             739 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 396339tic ultra-conserved element locus
            uce-195, sequence.
ACCESSION   KCPA01003597
VERSION     KCPA01003597.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 739)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 739)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..739
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="396339tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>739
                     /note="ultra-conserved element locus uce-195"
BASE COUNT          208 a          168 c          159 g          204 t
ORIGIN      
        1 aagcaggtgg tgacagaaaa ggaactccac acatattgca caaatggggg ctgtggacta
       61 caatctctgc ctttgtgcca gctgtcaaaa aggggtgcat gcttgtatac aaaaagcagc
      121 aatatctctt aaatcaaaac tgcaatgcaa ttcagctccc ccattacttt aaagatagta
      181 ttctgtttga ataataaacc cccagttagc attatgaaat actgaatagc ttttaaaaga
      241 atttagaaaa tacgtacaag gatgaaaagg tcacttgcat aaaagagggt atgcacaagg
      301 tgaaagccta atgaaacatt atgcggtatc ttttttggta ctcagaatag ctccaaggtt
      361 aagagagtcc gagtcagtct tctgcagatc catttcctct ctccaggctt ctcatgttaa
      421 cccagtgatt tagtactctg cattaagagc aattcacctg cctctggtgt ccctgtggcc
      481 catccctctg gggagcgagg tggagaataa aaagttccac atatggtaaa gtcaagctgc
      541 ttggagcctg ctgagtgtct gctgtgggga tagcggctcc tgaaagcccc agctggtact
      601 tggaagagat tctgcattac tacacctcag tgcctgcttg gttcccttcg gaaactgttg
      661 gctccacata cgacagccat tttagatctc ttcaaccctt ttctcccggt tctgtatcca
      721 actgaacagt tggtcctct
//
LOCUS       KCPA01003598             570 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 396451tic ultra-conserved element locus
            uce-4377, sequence.
ACCESSION   KCPA01003598
VERSION     KCPA01003598.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 570)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 570)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="396451tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>570
                     /note="ultra-conserved element locus uce-4377"
BASE COUNT          163 a          102 c          116 g          189 t
ORIGIN      
        1 ttttactgtc aaataaatat cttttaagta taaggatttc tttctcccca ccatcaccgt
       61 ttaatttatc ttttgcttaa atctttcctc tccagaaata atacaaatca agcctctggg
      121 gcctgtttat ataatgggga tttatgtcat ttcaagacaa atggcttttg ctaagtttca
      181 gggaagcacc tgtattaatt gtatttcctg ctcatgcatt gcttttgttt gcaacagaag
      241 aattcatctc aggtgagtta accttgcttt tagagagggc acctgcagtt atcttagtgc
      301 ttattgtaaa tgaaaacatg ttgagccttt aaagcagtga aataaagagg tgctgacaag
      361 agggtatgcc aataggatta gaagcttttc tcaccacttg tattatcggg atggagaatt
      421 gagtcacgtt aaattacagg gagaagagat attcccagaa gttccacaga tcagagattg
      481 acttgctcct ttagtaaacc tgtggatagg aggggcatcc tgtgcttggt gagattagaa
      541 aaagaccttt cccttttagc cttaggcatc
//
LOCUS       KCPA01003599             698 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 396561tic ultra-conserved element locus
            uce-3586, sequence.
ACCESSION   KCPA01003599
VERSION     KCPA01003599.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 698)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 698)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..698
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="396561tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>698
                     /note="ultra-conserved element locus uce-3586"
BASE COUNT          181 a          170 c          147 g          200 t
ORIGIN      
        1 aaggagttat taaatgccaa gcggatatgc aataaatccc attgatttta caaactccag
       61 cttgtcttca atctccttcc gttctttatc ctgggggcat tgcaacaaaa ccctatttta
      121 aatacctttt ctttcccttc ccccccccct cctctcactc ccaaaaaagt gtcaatattt
      181 tatttggatt tttaacttcg ctccataaca gttgtttgac ctcctgactc atgtgagtca
      241 cataaattct gggactttat tcaggagcca tgttccttct attgaataag caatttggga
      301 gggtgaatta atgacttgtg ctgttgctgg aaagtccctg aagaaatatt aaaattgctt
      361 gcagaccaaa tcaatactca ctgaacaccc agcatgagga cctgggcttt ttaatggcta
      421 caagcagcgg cactgggtag aggaagggga attcctgtac acacaacgca cgcaggcaca
      481 cacagccaac agtagtcagc cttgctggct gtttcaacag catatccttg tgcacgcaac
      541 ctgctacgaa ctgctgccag ctgtgccagg gaaaggactt ccccatctct ctcccaagaa
      601 gatcatgcag gatttgctgg ctgtttgggc ttgttaagcg cttgggttag catggtctgg
      661 cacaatctgc gaggcacagg gaaggttgat tatttgtg
//
LOCUS       KCPA01003600             626 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 396671tic ultra-conserved element locus
            uce-4042, sequence.
ACCESSION   KCPA01003600
VERSION     KCPA01003600.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 626)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 626)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..626
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="396671tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>626
                     /note="ultra-conserved element locus uce-4042"
BASE COUNT          197 a          107 c          119 g          203 t
ORIGIN      
        1 ttgttatgtt aatttaaaaa tttaacaggt ttattaatcc tgcagaattt attatagtca
       61 aacatgagat attattaagt tgctattgta cagagcattt accttcgctg ttggaatgac
      121 ttgtcctctg cattggcaga cacagaaaca ttcattttgt ttcctaatta ggagagctgc
      181 aatcaggaac catgacaggg ttcagctcct ccgtgtacag catgccaggt tccatagtgc
      241 aggctttata aaattctctt taattcaaga acagaatatc attaactttg taagtggatg
      301 aatacaatgg acaagcaatt taattaactt ctaacattgg atgttggaca ggagacaaaa
      361 tgaaattatg cacatatttc ttatgcaggc agtcaacctt gaaaggggct tgattgtgat
      421 gggtcagaca aggggacagc tttgtccaat tatttgatgt ttagtcctag aatatgaaat
      481 ttgaaatttg gtactttgta aatcaatcat ctcttatttt gaagcagcta cgaaggttct
      541 ctgagataca aaacaaccac cagtgactgt gacacgctaa atacaacctt ttaccacatg
      601 gtagtttcct atttgtagat gacccg
//
LOCUS       KCPA01003601             329 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 396774tic ultra-conserved element locus
            uce-1134, sequence.
ACCESSION   KCPA01003601
VERSION     KCPA01003601.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 329)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 329)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="396774tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>329
                     /note="ultra-conserved element locus uce-1134"
BASE COUNT          107 a           49 c           49 g          124 t
ORIGIN      
        1 tttgtgacga tgtgaagagc aggtcgaaag ttttgagggg ttttttttct ctcattatac
       61 tctgtaaatg gtatgtcagt taaagcaaat agaaaaaaaa aaaaaccttg catacgcctt
      121 ttctatcaag tgctttaaaa tatagaataa atacacacat cctgccagtt ttttcttaca
      181 gtgagagtat ccttacctgc catttaatat tagcctcgta tttttctcac gtatatttac
      241 ctgtgacttg tatttgttat ttaaaacagg taaaaaaaga aaattaactg tagcgcttca
      301 ttatactata ttattattat tattattgt
//
LOCUS       KCPA01003602             610 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 396886tic ultra-conserved element locus
            uce-4925, sequence.
ACCESSION   KCPA01003602
VERSION     KCPA01003602.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 610)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 610)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..610
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="396886tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>610
                     /note="ultra-conserved element locus uce-4925"
BASE COUNT          195 a          113 c          114 g          188 t
ORIGIN      
        1 aatcacaatc aaccagggag aagaattatc tgctgaacag ctttgaagca aagttttccc
       61 agcaggcttt ttctgtattg aagtttcaat gtaaacgcat caccatagct gaaatactta
      121 aagatgattt acttaaaaag agagagagga gctgataaga aaatatatcc ccaattacca
      181 cccctcctct tcccgatttg taactgctcc taataaactt tcatggtcta tgtaaaatgc
      241 tttagtgcgg tgacaaattt ctgctggaat ttgagatgtc ttgttcagag taatagctat
      301 ctcacacagg tgcccagctg ctattgtaaa atcagtaagc atttaattga aacaaatgac
      361 tataataata gtacattatc cctgcaggct catagccata acagttttaa ttattgagtt
      421 aagagtcaaa ctaatttatc ctttaaagta acagccacat ctttggttcc accgatcatc
      481 ctgttaggaa cacgagggga acagttggaa aggatttaaa aaggaagtaa tttattttgg
      541 tagaggtgca tttatcacat ggcagaggat ttctctgtgc actggtgttc ctaactgtgt
      601 ttgtcacttc
//
LOCUS       KCPA01003603             386 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 396991tic ultra-conserved element locus
            uce-1744, sequence.
ACCESSION   KCPA01003603
VERSION     KCPA01003603.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 386)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 386)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="396991tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>386
                     /note="ultra-conserved element locus uce-1744"
BASE COUNT          125 a           87 c           54 g          120 t
ORIGIN      
        1 atttaatttt ctgcacttcc tattcgtcct ccagcaaccc cttcctggaa ctaccacact
       61 actgatgcac actagttcaa aacagaggta aagaagtttt ctttgtcaac agcctgacaa
      121 aattgaacct gttcttttat ctgcctatgt tcatttagcc caccaagcag tctttattaa
      181 agctgaggca tcaggcagtc aaagttcatt aataccattt atataatctc tgcagtttca
      241 attaactcag caagacattc tactacatga taacagtctc attaattcaa taaaatccca
      301 taactattaa caatatggtc tatgttaaac ggggtgtcac ctagtagaaa ataatagctt
      361 taacagcttg tgatgaaaca cagtgc
//
LOCUS       KCPA01003604             316 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 397100tic ultra-conserved element locus
            uce-5032, sequence.
ACCESSION   KCPA01003604
VERSION     KCPA01003604.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 316)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 316)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="397100tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>316
                     /note="ultra-conserved element locus uce-5032"
BASE COUNT           89 a           58 c           57 g          112 t
ORIGIN      
        1 tatgactttt gaagttgcga gagggaaatc catttccagc ttcttctagt tatgttcaat
       61 cctttcagtc tctatctgaa attaaaaaaa tcaataccgc atttcgaatt gtgttttgat
      121 aacctttcta caagtactgt tctagacatc cttcaccact tgcttggctg cattatctgt
      181 aattgtcttt taatagactg agactaaatt attagaaaag aattgcatca ccagggagta
      241 agggttgtca gataccggtg agatgtaata catcaaatgc tgctgtgtac agccttatct
      301 catatgctgt ttgttg
//
LOCUS       KCPA01003605             615 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 397208tic ultra-conserved element locus
            uce-3924, sequence.
ACCESSION   KCPA01003605
VERSION     KCPA01003605.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 615)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 615)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="397208tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>615
                     /note="ultra-conserved element locus uce-3924"
BASE COUNT          188 a          127 c          110 g          190 t
ORIGIN      
        1 aatatttaat cttgattgat aactgaaagc tttggaacat gtattagata taaagtatta
       61 tatcaataaa gacattacaa cgtcacatat gtacaaccat cttcccttag tatcatgtaa
      121 aaattgacct gtgttggttt ccaagagctt tgctcaaggt ggctgatgtc aaaaatgcag
      181 caaagactca ggctgttcag ctttaatttc tggagcaaaa cttcagcaaa cagtaaaaca
      241 cttttgtgga gctgtgaaag ttcagcctag ctgtttgata aatgagcaga caggcaagca
      301 gcccttcttt ctttttttgt atggattcaa tgaagcctgc ctaaagaaca ccacatgctg
      361 ttccagctac tgatctaaca ttccgcaaca tctcagcctt ccaaattccc tttaattaca
      421 cattaatccc acccctctct ctttcatttt ctgcagacag ggttgggggc tccacaaggc
      481 tgtgggaaaa aaggcagtgt tgaagaacta ctttctgagg atgtttgtca ttctgaaaat
      541 accatagctg ctcttacagc cgttgattaa tattagatgg aacagcatca aaacatatta
      601 ctttctttct agtag
//
LOCUS       KCPA01003606             491 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 397311tic ultra-conserved element locus
            uce-1025, sequence.
ACCESSION   KCPA01003606
VERSION     KCPA01003606.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 491)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 491)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="397311tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>491
                     /note="ultra-conserved element locus uce-1025"
BASE COUNT          158 a           89 c           84 g          160 t
ORIGIN      
        1 ggttacagta attgctgtct gagcctcaaa ggctaaaaat cgtttttcat ctcatgcatg
       61 aagaatttta gtctgattga tgacagctat ggaacctttc cttagtcact aagctgcact
      121 aatttgcaag ctaaaacaat attagcaaat tgttaatgat ccatgaaact gcagcagcag
      181 ccttaaatgt tatgctcaga actttcttac aactaaagca gcttacctaa attcccacaa
      241 tggacacaaa atgagatgac atttactaaa taatcgtgaa agtgaaaggc ttggctaatt
      301 acattagtgt gaataatttg tattgagggc atgtgaacaa ttaacattaa aacccagacc
      361 tagtttgtag cagtttggat ttaattttca cattgagcta aagcacacat ttcctgtctg
      421 cacttaatgg ctgtgatttt cctctatttc tatcaatgtc tgtctggctt ttaaaatgaa
      481 ctggaaatct t
//
LOCUS       KCPA01003607             428 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 397417tic ultra-conserved element locus
            uce-1100, sequence.
ACCESSION   KCPA01003607
VERSION     KCPA01003607.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 428)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 428)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="397417tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>428
                     /note="ultra-conserved element locus uce-1100"
BASE COUNT          137 a           78 c           93 g          120 t
ORIGIN      
        1 gtgtgtgtgt ctgaaaagga ccccaatgaa aggaaggcat gagagatgct aaacaatgct
       61 gtgcaaagtt gcagactgtt cggctacagg ccagaaaatg aatccaattt ttcattctgt
      121 cattataaat atttcagtgc aaatggtact gattttctgc aactgtggtt aagcaaaggg
      181 cctccgagtg aatatttaag ggggaaaaag aggaaaatta aggctagcaa ccaattaatt
      241 tcaaactttc agtgtaaaaa ttctacagtg atgcagcgtg tgactcgaag gagaaaaaaa
      301 catttactct gctcttcttc tgacagtttc tcataaaata tctgcagtcc atctatcttt
      361 tagtactcca ggctcctctg gagagcagaa aatagtagtt taaagctcac ttcagtgcca
      421 gtctgcgg
//
LOCUS       KCPA01003608             757 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 397526tic ultra-conserved element locus
            uce-2131, sequence.
ACCESSION   KCPA01003608
VERSION     KCPA01003608.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 757)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 757)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..757
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="397526tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>757
                     /note="ultra-conserved element locus uce-2131"
BASE COUNT          274 a          115 c          130 g          238 t
ORIGIN      
        1 tgattgagaa aactcatagg aagttaaata agtgaaacaa catttcccaa gtcttccaga
       61 actagtttct gtgtgtatat aaaaaatctt acaaaaacat atccaaataa tcatgtcaaa
      121 tataatttct cattagcctt atataggtaa aaatgtttag caacactaaa caataaggta
      181 ttcaaaatat agaacatcta gtttaatgca gattaatttt taacaagaat tcctatgcag
      241 taggcagata gttcccacat tccattgtga ttgacaagcc tgacatatgg aatagttcac
      301 aaattcccag gtgactgaca gatggagaat agaaaggcgg ataaagttgc ctagagagct
      361 gaggacgatt tcatattcag cggttttgat caaaaggatt ccagatctca cactaaattt
      421 agcaccgctg gcaattagtg catgatttat tcagtccttt catttgctgg ttgacaaatg
      481 gaaaacaagc acaaaattaa aaataagttt atttccagca tttcggatat ttaaaatgtg
      541 tgtgtctttg tttgcacata aattaacatg agatgaattt atagtgagat taaatctgaa
      601 atggagatgc aagcaataaa taagagcttt tttatgtatc tttcaggcag aacaggtgtt
      661 tgaattaaga aatactaata tgtttagcag catgactcca cctttagcat tagggagttg
      721 atgtttccct aaatttagaa taatctttcc acaattt
//
LOCUS       KCPA01003609             456 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 397631tic ultra-conserved element locus
            uce-6808, sequence.
ACCESSION   KCPA01003609
VERSION     KCPA01003609.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 456)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 456)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="397631tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>456
                     /note="ultra-conserved element locus uce-6808"
BASE COUNT          144 a           64 c           80 g          168 t
ORIGIN      
        1 aaagaaatct tcctgtaaat atatatattc agaatccatg tatacaaaca ttcctttaga
       61 gttcagattg tgaagagtgt ccttattggc tagagaccgc tgcctcccgt ggcagaggtt
      121 acatgtgcta tagtaaagaa cacagtgtgt gaagtatttg atgtactgca gtaccatagt
      181 tattttggtc tgttaagtaa gttgcaattt gtgatgaaat gaagttgaaa gtagtgcttc
      241 atactaacaa atttccttgg ttacaacttg atttttcttg taaaacttaa aagggaaact
      301 tgaaaatttt atatatttcg attttgtaga ttttttttat tttattgcaa cacaaggtac
      361 caaaatcatt aaataaagta cactgtggtc attttaccct gtctcttgag ttctttttaa
      421 aactttttta ttctagtgaa tcaggaaaag gatact
//
LOCUS       KCPA01003610             357 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 397734tic ultra-conserved element locus
            uce-7843, sequence.
ACCESSION   KCPA01003610
VERSION     KCPA01003610.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 357)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 357)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="397734tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>357
                     /note="ultra-conserved element locus uce-7843"
BASE COUNT          106 a           63 c           72 g          116 t
ORIGIN      
        1 tgaaattcaa gtatgctgtt tgctttgtgt ttttcttttt agcatttatt tattttattt
       61 ccagagctgg aaaatactac tttgatgaat ctgttcctca ccctaaagct gtctgtctgt
      121 tattcatcag aaagcaggtc gcagttcagt gagcagaaga aaagatttta atagaagctg
      181 tgccaagggc tgtaatgcat cattttaggg ccctaattac attacaatga caaatatcaa
      241 tggtgacaac agcaataacc tacatccttt aatggctatg ctggaaaagg agtttgggca
      301 ctgtgccatc agattagact tggtttcaaa acataggcca ttagaagtgt gcacagc
//
LOCUS       KCPA01003611             566 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 397845tic ultra-conserved element locus
            uce-7632, sequence.
ACCESSION   KCPA01003611
VERSION     KCPA01003611.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 566)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 566)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..566
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="397845tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>566
                     /note="ultra-conserved element locus uce-7632"
BASE COUNT          161 a          114 c          113 g          178 t
ORIGIN      
        1 acaaggctta ttaatatcca ggcctgcaga agacaactgt cagacaattg gtcaacaagg
       61 tacatggtat ctgttagata ctgactaacc cattatgatc tttatgaagt gtccttttgg
      121 gggtctagat cttcaaatat gagttggaag acccttttct tttattagtt gctaagctct
      181 ttatactttt accatattgc ggcaggttag aagtctgagc tttattgtct tatgttattg
      241 aaaatccaga ttcccgcagc cttctccctc aggtcaagat ttgtctgaga atacattctc
      301 atttctccat gtacaaaggc tgtctggaga gaggcagaaa aagattatga ctgtaatata
      361 cttaaatcca atttatttgc ctgactagaa acttccacac ttcacaattg cttcctacag
      421 aagattttgt atttaattcc ttcatcgcag cgaggagcgg gagcgatctg agtcctccaa
      481 caggtctcac acacacctga gccagaggag agggatgaaa gcagcaaata ttttgcaggc
      541 ttgcatttat ttctgcttga ggataa
//
LOCUS       KCPA01003612             340 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 397952tic ultra-conserved element locus
            uce-5751, sequence.
ACCESSION   KCPA01003612
VERSION     KCPA01003612.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 340)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 340)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="397952tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>340
                     /note="ultra-conserved element locus uce-5751"
BASE COUNT          126 a           66 c           50 g           98 t
ORIGIN      
        1 ccaaacaatt acaatttcaa tttctaacac aaaaaaacca aagcctctat ttactaatca
       61 tgtttcctct acttcttgaa atctgaggaa caattaacat tgcagcggtt aaaaattatc
      121 cattaattag agctggaagc aagcagccat gaaatacagg tgataaccat aaatcagaac
      181 aattagtctg tctaaaaagg caacatgatc aaatcagaaa ctctctacca cctgctcatt
      241 taatcttagg ttgcagtttg ttctgaggag acaaatctga acaggatgat gtgaaatttt
      301 acagctatgc atccatcaag gttattcttt gaaagcaatt
//
LOCUS       KCPA01003613             560 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 398056tic ultra-conserved element locus
            uce-6602, sequence.
ACCESSION   KCPA01003613
VERSION     KCPA01003613.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 560)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 560)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..560
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="398056tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>560
                     /note="ultra-conserved element locus uce-6602"
BASE COUNT          165 a          103 c          116 g          176 t
ORIGIN      
        1 ggcagccgct gaccaaggaa aggctcgttt ctaagtggaa ggaaggcacc cagaattaat
       61 tgttgcactt tcgtcacatg tttatagtaa atacaataac tgggtacttc cccttcagca
      121 gaatgtttgc gagactaaac tgcaaatgtg tttattgctg agatgaggct tacatttgaa
      181 accagttcct gaatttgcag cttctttcat gcagccagta tcagtccaag tgtggtgggg
      241 ttgagtctag tgaaggcccc ttcctgtcat aaataagatt actttcattt cacttgtgga
      301 gtgtgttatt cctcagagta atgaatttcc tctgtgcctt tgagcacata aacatggttt
      361 tcattaggtt tctattgact attaactcca taaatgcgga tgtattttcc catgttggaa
      421 gtaaacggct tcttcactga agactccaaa ttgctgaaaa tgctgcaaac ctgaattttg
      481 ctatgaagga acaaaaatac tggaaaaatt agtttattaa aaatagacta aatgtagaca
      541 gacaaatagc ttcgggcttt
//
LOCUS       KCPA01003614             620 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 398168tic ultra-conserved element locus
            uce-6584, sequence.
ACCESSION   KCPA01003614
VERSION     KCPA01003614.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 620)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 620)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..620
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="398168tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>620
                     /note="ultra-conserved element locus uce-6584"
BASE COUNT          188 a          108 c          112 g          212 t
ORIGIN      
        1 aaaatctgtc aacagatctt ttaggtgctt ttggggaaac taagctcaat ttgtcaataa
       61 aaactagaaa ttaactagcc ttgctgctaa tttattgaaa gagagagatc tattctttct
      121 ttttaacaaa ctttgaccac actcggtctg gggagctcca tacaaaagat atacaggact
      181 ggaaaaaaat aactgattaa attttaacca gctgctgggc agatagtttg cctgaggcac
      241 ttttgtcagt ttcaaagggt ccttttatta attttgcatt ttgtattttg ttagtggaaa
      301 gagctggctc tgttgggact gccaaaagct ataggcagcg aatcttacag cagcaaagag
      361 gaagctgtag agcatgccaa gtagatttag cacactgagc actctaaatt acatttgttt
      421 tatcagttct aaaaatatat taacttcagg tgtaagttct ttgaataaag ccttaaagct
      481 aatacattca gttcctcctc tgtttatata aggcttttac tttgtctata aaaataaacc
      541 actgtagtct ttgccacata actacccatg taatttaaat ctttccttcc tatgattgtt
      601 ggtgcttctt tgttggtctg
//
LOCUS       KCPA01003615             651 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 398279tic ultra-conserved element locus
            uce-6127, sequence.
ACCESSION   KCPA01003615
VERSION     KCPA01003615.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 651)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 651)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="398279tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>651
                     /note="ultra-conserved element locus uce-6127"
BASE COUNT          198 a          146 c          121 g          186 t
ORIGIN      
        1 aggaggcttg ttaggttcaa agtaagactt caaaaactat gctgctggat ttatgaagtc
       61 cagttcattg caaaaaaaag cccaataaat ttcacttagg cccagcaagc ttgaggaaaa
      121 tgacacaggt ctatcggcta aagagagatt tccatttctt ggcgcagtaa caaatcctca
      181 agcagagtag gggtgagatt ttcccctgta agtaacttaa tgaatgaagt actaattaac
      241 atcatggcat tgataaatgg agagagagat tagggatgta ctcgatattc aggccttccc
      301 agatggaccg tcaaagccac attaattcct atctcattgg agcatctgct tctcccataa
      361 tccattgccc cttggtacaa acaacacaaa ctgttgtgac tcaattcgat ttatatcaat
      421 ctaatttctt ttaatccaat ttgtattcca atctactacc ttctaatcac ttaaatcttc
      481 agcctccatc tggtaaattt tctctcaaaa ttaaccgagc agatgcctct gcaattgtct
      541 tccacagtca ggctaatcat gccctggcag tggcctacag agctcgctga ataggtacgt
      601 gacttacagc attgcccttc ttattacaag catggcgatg caggaaggcc a
//
LOCUS       KCPA01003616             659 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 398390tic ultra-conserved element locus
            uce-5135, sequence.
ACCESSION   KCPA01003616
VERSION     KCPA01003616.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 659)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 659)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..659
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="398390tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>659
                     /note="ultra-conserved element locus uce-5135"
BASE COUNT          214 a          115 c          129 g          201 t
ORIGIN      
        1 aatagcaatt acagttcaac agatttcatc cataggtgta atatttgcat agtgcatggt
       61 gagtgccttt aatacagtca ctcctcagtg gaagcagcag tggtggtggc agtattaaag
      121 tggttagtac ggatgcctct gcccaggcca ccacatagca accactatgt ttctaaggac
      181 aaatagctcc tgcctgccct aagcaactcg gtgagaacat caaaacatgc cttgtcccat
      241 tagtgatagc aactgttacc tcaatcatga atgacacagc cctaattatt aaggtaatta
      301 gaagttataa cactggcaat attaaaggga gaacttctaa agcccattaa caatgttact
      361 ttaagtgatc tggctgtgaa ctattcaaat ctctaattac attatatgtc tgtcttaagg
      421 ggtgatgtaa ttaagtgatg ggagagggaa tgaatgtata gtgactacta cactatactt
      481 cgtaagtact attttcacag aaatcaacct cagtaatgtc attatgtcgt ttagaggtag
      541 ggatttttgt tcgactctat accacatgta gctaaaaaat acttaaaaat tatatatcat
      601 ggtttagtat agtgatatta tcaaaatgaa gttggattgg atacattatt caggcatga
//
LOCUS       KCPA01003617             465 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 398497tic ultra-conserved element locus
            uce-683, sequence.
ACCESSION   KCPA01003617
VERSION     KCPA01003617.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 465)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 465)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="398497tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>465
                     /note="ultra-conserved element locus uce-683"
BASE COUNT          130 a          123 c           64 g          148 t
ORIGIN      
        1 cacctagaag tatctgccat tctttccatc tcagcctaac accaccatca ttttcacttt
       61 gaggatgtat atttgtatat attttccttt aaaactgatt ttgctcatat gaaaagcatc
      121 cctgagccat gcacagcttt cacaaaaagc tgcctttaaa gctatctagt tcttttccac
      181 ctgatcctat aaacactgct ggcaatttct cccccatgcc tctaacatat tttcacttag
      241 caccagtttg atgtataaga tctgacagcc aggcagttat aggccacctg catcactgtc
      301 gccatgacaa cagtgaaaga caatccatga tcccatgccc tggtcacacg tttcaataca
      361 gcttatctgt ccaaagccac tgagtctaat ggaagagagt aattacaatc ttccactcaa
      421 attctcacca taaatgctct tcttatttta ttcattgctg ctttg
//
LOCUS       KCPA01003618             476 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 398605tic ultra-conserved element locus
            uce-4293, sequence.
ACCESSION   KCPA01003618
VERSION     KCPA01003618.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 476)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 476)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="398605tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>476
                     /note="ultra-conserved element locus uce-4293"
BASE COUNT          151 a           95 c          112 g          118 t
ORIGIN      
        1 tttttgagtg gcaaagtagc cccacttgtc aatcagctac ctcgcagctc taatggattc
       61 tccccgaatt taatttaaca tcttacaata cgcccacatg gccagaaaat gtggccagct
      121 tgatagggtt cactgagcca aaggagtggg accaaaacag ggcattaatg tataggggaa
      181 gaatggctgc aatcagttcc cttgtgaatt ggacagagaa cttggagctg aggcaattat
      241 cagccatcgg ggattaatag ggaagtgtga atgccaagct gtatatgtta ggggcagaat
      301 atgttgccta tagaaaacaa caaagagcgt ttcttactat taagtgagat taaacgtaat
      361 ggcctgattt aatcacaaag gcagaattaa attcagatgg caacttcaaa gtggacacat
      421 gcacagagcc cactgcatac atttacatat agctggcata gcttggctcg cagcac
//
LOCUS       KCPA01003619             913 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 398718tic ultra-conserved element locus
            uce-191, sequence.
ACCESSION   KCPA01003619
VERSION     KCPA01003619.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 913)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 913)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..913
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="398718tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>913
                     /note="ultra-conserved element locus uce-191"
BASE COUNT          287 a          169 c          206 g          251 t
ORIGIN      
        1 aggctcacag gtagcaatcc tgagagggca cacctgggac ttgctcagta cagagctgcc
       61 agatgttccc tcaactctct gctcctcagc ctggtccagg gccttcctgg ttgtgttgac
      121 aggctgtata aacaaccctt gaggcacagg agctgcagag gtaatgaagc gccttgaggt
      181 taactatcaa gggatggatc cactccctgc cacaaaccag gggtcacgtg gctgaggaat
      241 gtgtatccac agatagtgct accttcagag aactctactt acaggtaagt aactcttctt
      301 taaaggaggt atctttgtgt ggcagactgt ttatgggagc aatttgaatt gaactttaaa
      361 tgaaaaaggc atatctctgt aagtggtaat aattttagtc aactcgctgt ggctaggggt
      421 tgtggaattc attagcacag attaacatat aaagtgggtg agatatctaa tagcaaacgt
      481 agaggtttag ggaccttaat tcatcactga atgaacagcg tgtacagtat tagggactat
      541 gaaattttta atttacacaa agtgtccaag aatataggga ataaatttaa acccaaaaca
      601 gataatggag ctgtgccctg cctagctggc aagttgaatt gtttttacac tgagtgaaga
      661 aagctaatta tcccaagcac aaggagactg ctaaaaataa taagattata aagaataatt
      721 tgctgatata attacaacaa aattgggtac acacaatcgt cagatacatg tattgcttga
      781 cctgggcgag aaagtgaaat aaatccttcc tctatagcct tcgtaaattt gtttttatca
      841 tctccaagtg gtgtttgcac aggcagcaca atttgcatgt gtaatgtggc tgtacaaatt
      901 gacaacaagt aaa
//
LOCUS       KCPA01003620             621 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 398828tic ultra-conserved element locus
            uce-7849, sequence.
ACCESSION   KCPA01003620
VERSION     KCPA01003620.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 621)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 621)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..621
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="398828tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>621
                     /note="ultra-conserved element locus uce-7849"
BASE COUNT          211 a          126 c          114 g          170 t
ORIGIN      
        1 tgtcaataaa tatcatgaga catttttaaa atagttgaaa ggttaaggaa atgtaaaaat
       61 atgaatggaa atgagaaatc catctacttt cctacaagaa aacatgcatt acttcaataa
      121 cttcacttaa tcacaaaatc tagtcgtgaa taggctgcta ccataaggta agacaggttg
      181 cagacagtcc tttatgtaaa agcaaatgtc agaagaaaag ctctgatatt tagttgtggg
      241 ctcccacttt tcacataggc atttcctaaa tccatgtttg atgagcttct ccagctataa
      301 attctgtaaa ttccctctgg agcagtgcag agtgtgcttc atgaaaatgt catctgccag
      361 cactgcaatt actcacactc cagcaatcat gtgcacaatg cagaatgggt cgaattcagg
      421 tgagaacgag aaccagcaat caagcctctg gaattgagaa caaagccatt ttctttcatt
      481 tgccatcaac acaaccatca aggccttaat tacaaggcaa gtgtcaagcc tggctgctga
      541 aaggcttatt attatacagc tcagcttcaa atcagttttg tattgatgaa ctgcaaaaat
      601 gaggaagcca gcttagcccc a
//
LOCUS       KCPA01003621             348 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 398926tic ultra-conserved element locus
            uce-4901, sequence.
ACCESSION   KCPA01003621
VERSION     KCPA01003621.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 348)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 348)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="398926tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>348
                     /note="ultra-conserved element locus uce-4901"
BASE COUNT          107 a           54 c           68 g          119 t
ORIGIN      
        1 ttttgttgcg tagtttttga atgagtgtca ttgttttctt gtgtatttat actgtatgta
       61 tgatttgcat gtttcaaaga taaagggatt aaaaacggta tactgacaac tgtttacaag
      121 aaagtggaga aaaatgtaca tacatttttg tatgtttaga tataccataa atactcagga
      181 ttggagctgc ttgtaagtat aacaaaatac acataacttt attttatctt gccagagtcc
      241 atcagttacc caaaccaaga tggcactttg tcttgtttat ctttaaactg taggccttat
      301 cggaagccgc ttaaaaggga cacttcactg gaggaggcat ccaggacc
//
LOCUS       KCPA01003622             549 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 399035tic ultra-conserved element locus
            uce-1765, sequence.
ACCESSION   KCPA01003622
VERSION     KCPA01003622.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 549)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 549)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="399035tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>549
                     /note="ultra-conserved element locus uce-1765"
BASE COUNT          207 a          102 c           80 g          160 t
ORIGIN      
        1 gctataaaaa tgaaaacatt taaatttctt taaaattaca tttgacttaa ttacagccaa
       61 tccctaatac cagcaaacaa cccattttgc ctacttttca gcataaatag ccaccagcct
      121 catcatttca taaagagttg ttttcctaca tgatgttctc tatgtgcaga atgttaatag
      181 ctactatagc tgaatacgaa taggctttgt agctccactt gaaatataga aaaatggccc
      241 agacattaaa aaagataaaa gggaaaaggg cagtaatgaa tttagaggaa aatgaacatt
      301 aatggtacta gcattacctc atgttccaca taacaaatta ttggaaatct gtcaagcaca
      361 ccaaattatc tactcatctg ctgttgtggg gccctttgga gccatccaaa accagcaaaa
      421 gcaagacaat ttaagctaat tttactattt ataacaatag aacagaccat taagataaat
      481 taatgtcatt atcaagtttc tatgaaaatg acaaataccg ctatttcaag cagctttaga
      541 agctgttga
//
LOCUS       KCPA01003623             680 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 399149tic ultra-conserved element locus
            uce-1963, sequence.
ACCESSION   KCPA01003623
VERSION     KCPA01003623.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 680)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 680)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..680
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="399149tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>680
                     /note="ultra-conserved element locus uce-1963"
BASE COUNT          204 a          120 c          117 g          239 t
ORIGIN      
        1 aataatgagc tgttttgtgc aaagcagctc attattatga atgcaagggc atgtttggac
       61 tagtaaagca aatcataaaa attgctgccc ttgtcacatt ttttctttgt caataaaaga
      121 ttttcctcca ggtcagaaac aattattgac cagaaaaaat ctcagattct atttggaaat
      181 tttacctgat gatggcgaac attacctgca aggtctttgg tgttaaagaa atcacgacat
      241 ctgccaatct ttcaaattcc aaagggtaaa gaatgaggtc tgttaggctg tcatcgaaca
      301 tgacaggctt aatgtaaagt ttataacaga aaaagggcaa tcttattgtg gtttattcag
      361 ttttatgttg cttgttcagt agaaaagctc attttttatc taatttatag catttgaaat
      421 accaaacaga gtttttacat atctcctgag ctctcagctc ttcttggcta ccccttagtc
      481 attcctttag ggagcagtct taaatccttc caatttagca tctatgtgag accagacaat
      541 tgttttactt tagcatatcc ttcagttgtt atagagctgt ttctaactcc aaacatttta
      601 gtttaattac tgcttagaat atttgctata tttttatcta ggttgcctct cacttgagcc
      661 cattgggctg aagaaagaat
//
LOCUS       KCPA01003624             436 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 399257tic ultra-conserved element locus
            uce-6702, sequence.
ACCESSION   KCPA01003624
VERSION     KCPA01003624.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 436)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 436)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="399257tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>436
                     /note="ultra-conserved element locus uce-6702"
BASE COUNT          141 a           83 c           73 g          139 t
ORIGIN      
        1 tatcacatgc ttctggcaat ttaggcagga gagacaagaa agcatgtgat tgcatgttta
       61 acaagtcttc aaactttgtt ttgaatttca ccaaaagcat tgaagtaggc ctattgtttg
      121 aattactctc ctccattaag tacatgagtc tttacccctc caggctatgt tcatttgcat
      181 tttatctctg ccactcttcc acacttttat ttcactcttg accctgtttc taggagatgt
      241 gcgagtaaga agtcgggcag gatttgaaac agagagaaga ggttctcatc catacattga
      301 tttccgtatt tttcactgta agtatttaaa agcagataaa ttacaaataa acaaaggctt
      361 ccatcaattt taactactaa gcctctaaaa agttagcagt ataacaagac taatacttct
      421 taggaaaaaa aaagag
//
LOCUS       KCPA01003625             436 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 399358tic ultra-conserved element locus
            uce-144, sequence.
ACCESSION   KCPA01003625
VERSION     KCPA01003625.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 436)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 436)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="399358tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>436
                     /note="ultra-conserved element locus uce-144"
BASE COUNT          142 a           89 c           76 g          129 t
ORIGIN      
        1 tgcatgaaac aaaatggatt atgaatttta aaattgccaa ttatgttgca tcacacagct
       61 cagagcactg gcacaatgat gaaccccaat ccagattttt cagcttaaat ggctttacat
      121 tcaagcaagc aaattaacca taaaataaag ttttacaaaa tatcccaaga aagaataaac
      181 tgcagataat aagcaccaat ctggtgttga atgctgccca agataccaat tgttttaagt
      241 cacgacaaag acagctgaat gctcatcttg tgggtataga gcatggatga ttgcttgcca
      301 tgagtatctt ctctcacaaa taacagtttt ttcgctctta attttctgct aaattggaag
      361 ctaactgctt cccacattgt cgtcggagca cctgcagctg tgctggattt ctgcgcacca
      421 tttcttttag gtaaaa
//
LOCUS       KCPA01003626             612 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 399467tic ultra-conserved element locus
            uce-5085, sequence.
ACCESSION   KCPA01003626
VERSION     KCPA01003626.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 612)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 612)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="399467tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>612
                     /note="ultra-conserved element locus uce-5085"
BASE COUNT          157 a          120 c          130 g          205 t
ORIGIN      
        1 tgtggcttgc atagggagca ttatatccct ttaaccttaa aaggttgtat gaatttgtaa
       61 ctgagtgagt ctttcctaat attgtttgta agtgtttgcg tgctgttttt ataatgtttt
      121 cattgatgtc aagaccttgg tataaaaaca agactagcac tgtactaatt taccccatgg
      181 tctcctgtgt cttcctttgc ctcactcctt gagcaactgg catagctgca ggactgttta
      241 ctccacagct tatttcccct ttatctttga tgtcccagga tgtcaaaggc tgtgaattta
      301 atattgattt tataaagtac ttttactgta acatgtcagt taggattagc ttcaacctcg
      361 aggaagctca ggcagtgagc tggatttgca cgcaatgtgg ctctccagct ctcagactct
      421 tttcccaagc gaatgcttta tttataagag tgacagtgtg ctgtgaaagc agggatagca
      481 cacagccccc agctatctct gtgtcttgta tacacaacgt cagtgccctg tgtatacatt
      541 aggcttgaaa atgtaagtgg atcagagaga cgtatcattt gctggtatgt aaacagacag
      601 atgagtttat ag
//
LOCUS       KCPA01003627             640 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 399578tic ultra-conserved element locus
            uce-6081, sequence.
ACCESSION   KCPA01003627
VERSION     KCPA01003627.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 640)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 640)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..640
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="399578tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>640
                     /note="ultra-conserved element locus uce-6081"
BASE COUNT          140 a          178 c          133 g          189 t
ORIGIN      
        1 ggcaccaggt gtgccatttc atggtcatta gcaatttggg tcagagctgt ctttacctgg
       61 ttgtgttagt actactaggg acaaactcta ttcttcctgg ttttattttg ttctttttct
      121 tccgtttctt ctgtggtgtt ctccaccagc tgtaggcctg gagacattct cttttttttg
      181 ccatcaagtc ctgtaatcgc ctttatagta tttagcctca tttacattcc tccctcccac
      241 tccccatcac cacaggtgat ttccccatat tcaccttgcc cttgaaagaa gcctggggtc
      301 ccatttctcc ctccgcctcc catgagggaa agcagcctct ggggaaaacg cctggcaaaa
      361 ataacagagc caaaggattg tatgaacagc catattcccc tgacttgtca agctggctaa
      421 aggattgaca gcttcctctg ggaattagac aaaccagata gccctttgat gctggccaat
      481 cctttaatta gcttcaggac cggactgtgt tccgcttgag ctccaggatg cgtgatgaag
      541 aggcagggaa atctcttgcc tagacgccac tgtcccatct cccctcacct aggaacttct
      601 ctgagatgcc tctcctcact ccagcagtga aggccaggaa
//
LOCUS       KCPA01003628             702 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 399687tic ultra-conserved element locus
            uce-3059, sequence.
ACCESSION   KCPA01003628
VERSION     KCPA01003628.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 702)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 702)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="399687tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>702
                     /note="ultra-conserved element locus uce-3059"
BASE COUNT          234 a          165 c          112 g          191 t
ORIGIN      
        1 ccagtttcca tctgaagtta ttataatgac taataaatca ctattacagg caatcactgc
       61 attacatttc tgatgtgatg ccacacagaa caatgtattt aaaagtgaac ttgcctcttc
      121 ttttaacctc tctctctatt accaaacatt aaaaaggagc agctatcatt tcagtcacca
      181 ccagaaactg caaggaagac cacatatgtc gggaacataa gaggtagaag tgacagaaat
      241 tgataaaaac ttcatcacat ggctgacacc ccatatatca aagccctaaa tctcattctc
      301 tgcttgcctc caatttccat caaagcctgc cagctgcaca tttattgaga agtttgtgat
      361 ctgacagcta ctgtattacc aacattaatg atgcatcagt ctccagaatt actggggaaa
      421 cagtccaatt gattttatta ttatacagag ttcctcacat ttcatttcag gcagcttcct
      481 accacaaatt ttagcaataa ctaaaaatgc tacacagctg atgcacaaaa tgctagggcg
      541 aaagatggtt accacagcat catgccactc cattttccct ccaggagagc tccaaatcac
      601 tcagacacca ctgtgtaacc catgagttat tggtccatag ctaaaagggc ttgggtgata
      661 aacagttcag cactaatgtt cactgaagaa agctacaaac ag
//
LOCUS       KCPA01003629             793 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 399800tic ultra-conserved element locus
            uce-5991, sequence.
ACCESSION   KCPA01003629
VERSION     KCPA01003629.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 793)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 793)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..793
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="399800tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>793
                     /note="ultra-conserved element locus uce-5991"
BASE COUNT          218 a          146 c          206 g          223 t
ORIGIN      
        1 tgcaaatggt ttttctgttg acttgtctgt cattctctgg tgtctgcaga tatttgatca
       61 gctattctgt gcatggcatg gcccttctct ggcagctaca cgcatgggaa aaaaaaatgt
      121 tatcaataag ttcagaggag cctcagcaga ctcggagaaa tttcacacaa acataaaaca
      181 aaacctaacc cctgtgacgg ggaaagttta cattgcgcca gattttagca gctttcttgt
      241 gcctttggtg agatgtcaga agcgcaggtg attttaattt tcttgtacag agaggaatgg
      301 agaagtttgg aatttgcatg catgatcagg acctgtgttt gggaaaatgt aaactcatca
      361 cagtggaaaa tgtgttgttt ggagtctgag ggtgaaaaca aagctgagga ttttggagag
      421 actgcctgag ccagatggcc tggtgcattc ccagtctggc agcccaactg ctccctcctg
      481 tataatatac agccatttgt tctgggatat ttacgctaga gctgtttcca tgtgaatgtt
      541 tgaaaaccat taaaaatgaa catattagga gagataaatt tatttaattt gtgtgaatac
      601 atcgataagc aggctgtgaa tcaaaggcag ggagagactg gataaaataa ttagatgctt
      661 ctgaattgtg tgtggagagg cagagcaaga actcgctgtc ctcgcctcgg gaccagctcc
      721 gcgctgcttg tccgggataa acctccctgg gatgagtcga ggttttgcct ggggaagggg
      781 taaaacctcg ggt
//
LOCUS       KCPA01003630             497 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 399909tic ultra-conserved element locus
            uce-6176, sequence.
ACCESSION   KCPA01003630
VERSION     KCPA01003630.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 497)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 497)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="399909tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>497
                     /note="ultra-conserved element locus uce-6176"
BASE COUNT          157 a           84 c           98 g          158 t
ORIGIN      
        1 gagcaggcaa gagtgggtta attcaataaa ataaatataa aatactctcc aggctgttgg
       61 acagagctgg aaggggtcag aggttgctga gctgcttcac tagcacacta atcgatttgc
      121 tgtcaaggta gtggtgctgg ggtttcaagt aagagaagaa ttgagtgccg ctcgggccca
      181 atttccataa ttgctcactg cctttagtgt acaacctttt atgaaacaca aaaaatatat
      241 cactgaattg tattgattac ccattggtct gaataattca cttagtattt attacctgac
      301 cctcagaggt taaataaatc cactatctaa ctttggcttg tgagaaatat tacttattca
      361 ttgaaatgtg gactgattat tacacaataa gagtgtatct ttgttgttct ttttatcttc
      421 tcctggaaaa cttagtccct gcgagttaaa acaaatattt atggatagtg aagagcattt
      481 tccaaaataa acatgaa
//
LOCUS       KCPA01003631             851 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 400022tic ultra-conserved element locus
            uce-223, sequence.
ACCESSION   KCPA01003631
VERSION     KCPA01003631.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 851)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 851)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..851
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="400022tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>851
                     /note="ultra-conserved element locus uce-223"
BASE COUNT          206 a          174 c          233 g          238 t
ORIGIN      
        1 ccaagaatga actgagcaaa agcacacact ccctggaatg taaatatttc cagcacttac
       61 cgacatgctt ttagaacttc tgctgagctg gggtatatgg acaccgacat tgatggtatg
      121 atctgaggac taggtttgtg gctaattgga ggaggatctg ctttcatggg gctctgagag
      181 tcctccaacc cctctccatt aactgtatgt ccactgtgag ggctgttaag gctggtaaca
      241 ctgtttgtgg tagtctgttc agtagatttt ggagaaggtg ttgctgtgga aatggctgaa
      301 gatggtgagg aggcaacaga attctcagtc tttgtatgaa cagctggatg aatgttattg
      361 actttgtcac aggttccagt actcacattg ttattggctt ttcccatcaa caaggcagag
      421 agctgaggat tgtctgaact aagtaaacct ggtgacttag aatctccatg gctagggcta
      481 gaaacagcat ctgccgtcac ctgatggaca tgattaggaa gtccctctac actggcagtg
      541 ctgtttggtg tctctccaga atgcctgctt gtttcaggca ctgctgatgt gtttcctgaa
      601 ggcttgctct ctttggttaa ggtaatgcct tgttgtccac ctgaggtagc agtgtgagag
      661 gagaggtgat tgagagcagc cccctgtgtc actgaattgc taggcgtggc aggatgtcca
      721 ttctgattct gaataccagt gccagctgcc tggagatgct gggaaggccc agtggaagag
      781 agaggtcgtt caccattagg acctgccaaa tgtgaactct gacctttgtg aagcccctat
      841 gaaagaagga a
//
LOCUS       KCPA01003632             599 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 400127tic ultra-conserved element locus
            uce-3973, sequence.
ACCESSION   KCPA01003632
VERSION     KCPA01003632.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 599)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 599)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..599
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="400127tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>599
                     /note="ultra-conserved element locus uce-3973"
BASE COUNT          189 a          106 c          133 g          171 t
ORIGIN      
        1 aggaaagttt ggaaacacca gctgccgctg ctctccgatt tccagctgct tgaggcctaa
       61 ggctggagga ggatgccctc ctctggctac gcgcgttccc atttcatcaa gcctgggagg
      121 ctgagaagaa atcactttga acactgaggc ggggagctgg aggcaattac ttgtgattga
      181 tagcactaaa tatgaaaccg catgtacctc atccatgaag catggaatca gcagcatatt
      241 gttagtgggg gagatgaatg gggcttgaga taaccttggc aaattaggca tatgttagca
      301 ttaagctttg tcagtaagca ggctataaat tacagacata ttgtaactcc ataaactcat
      361 ctaatgaatt gaatgacagt ggtaatttaa ggcagaatgg aactgtttaa cccttttaag
      421 aatttagctt tatttctata ttacacaaca atccaaactg tattaaaaag ttgttatttc
      481 atatagggaa acaattctcc catatttcat gtacatttta acaaactgtt ggcagcctgc
      541 aaattatttt atttgtaagc tgattaaaag aatggaaaaa gaatggaata gctggagtg
//
LOCUS       KCPA01003633             474 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 400232tic ultra-conserved element locus
            uce-7159, sequence.
ACCESSION   KCPA01003633
VERSION     KCPA01003633.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 474)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 474)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="400232tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>474
                     /note="ultra-conserved element locus uce-7159"
BASE COUNT          155 a           86 c           82 g          151 t
ORIGIN      
        1 acacactgaa tggagcttca ttgtaaaaag ttattccagg atattggctt ctgtccaaaa
       61 ggtaagagta acggaggtaa tttaaatatg cttgagcaca ggaacaaatc cctaagctcc
      121 gctgctctct ttgtcaaaat ccattctttc agaaaatcat tttctttact cattggacaa
      181 caaaatgcat tgtcaagaaa ttttatagca ataattataa aagatgtcca tttgaaccca
      241 ttgaggtctt actgatttta taatacccag cagacctccc tgcaggagaa cgttatattt
      301 atgttagcaa tatatgcgag aattgagatc gtaaaattaa atgaccacat agaattgtca
      361 tttatatgat gagcacctac aaatgtgaag gctggtttat cttgcaagat agggtagaac
      421 taaatggtcc actctctgtg aatgctttta atcacgcatt tcttcactgt ttct
//
LOCUS       KCPA01003634             647 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 400342tic ultra-conserved element locus
            uce-3071, sequence.
ACCESSION   KCPA01003634
VERSION     KCPA01003634.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 647)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 647)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..647
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="400342tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>647
                     /note="ultra-conserved element locus uce-3071"
BASE COUNT          180 a          110 c          183 g          174 t
ORIGIN      
        1 aagagagact ttgaaggtgg aggtgttgtt gtgagctggg tttgggcgtg tgaaattcaa
       61 tcaaagtgaa aataattcca tcgccttctt caaagccctg caaagggaag tcgggcagaa
      121 gctgggacag gaaattgaaa tctgaattat tttaaactga tcgggttaaa ggcctctctt
      181 ttacaccagc acacttgttc ttttatttga tacttgaact ctgaaaattt tctgtgactt
      241 tctagggaga aggaggagca gctgaggcgg gtgacggagg tacagaggct gcaggcccag
      301 caggcaggcg ctgccctgga ggagtttaag cggcaggtgg agctgaactc agagaaagac
      361 tctgctgaaa tgaaacagcg ggtgaggagg tcacaatgcc agcctttctg aaactctggc
      421 gcagtgggat agcggattct gatcttataa tgccagaaac atgctccact tgagagtgct
      481 acatcaaaat ctttcacaat gtagtgtctt tgcagcgagt cagaaaggga tggtggcggg
      541 tgtttcatct ttctgacaaa gccagaattg tcattgttat aaagatatct gcagttatga
      601 tactgattag ggatttttca ggagtgagag tataaagtgt tagttta
//
LOCUS       KCPA01003635             311 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 400438tic ultra-conserved element locus
            uce-5399, sequence.
ACCESSION   KCPA01003635
VERSION     KCPA01003635.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 311)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 311)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="400438tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>311
                     /note="ultra-conserved element locus uce-5399"
BASE COUNT          103 a           56 c           61 g           91 t
ORIGIN      
        1 aactgccagg cctccgggac acaggcatct gctccaaaat gggtcattta ttccataccc
       61 ttgttatttg cagcaaagta taatggaaaa aattgactgt ttgcttggtg caatagggca
      121 tgactcttta cacagaaata atagctaaac agtgatggat tctaaatctc cattacagtg
      181 aaagatttga aggagtaaag cagttagaaa aataattggt tttcttgttt agctttaaaa
      241 agcctttaca caccgccaaa tggagaagac ttctcacttt attttgatta acaaagggaa
      301 cctacttagg g
//
LOCUS       KCPA01003636             637 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 400544tic ultra-conserved element locus
            uce-2445, sequence.
ACCESSION   KCPA01003636
VERSION     KCPA01003636.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 637)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 637)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..637
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="400544tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>637
                     /note="ultra-conserved element locus uce-2445"
BASE COUNT          205 a          156 c          110 g          166 t
ORIGIN      
        1 acttttcaaa ctcactttta gaaggaagag attgccagct tcaaatctct ccagtggtga
       61 aaataagaaa taataaaaga catcccaata gtcttatact aaggaacgac tatctggact
      121 tgtaaaacaa accttgtaat tatttcatta ctaaatgctt taatctgtca caaatgcaaa
      181 aacccaaaaa gcgtttcata gttctgacca ggctcctggg ttttttcttc tccctatagg
      241 acaagctttt tgcaaaaact gaatgcaaga cccctgagga gcatacggga acagaaccac
      301 caaatgtctg gttgccatct gttctaccca tttactctcc caatatgtaa ataaacgtca
      361 gtgagcgcag ggaccagtga aacacacagt cgctctgtaa agcccacatt tctgcctctc
      421 ctcctgatga gcagagcagt ggcctcacaa gcacgctgag aatacaccat gaaaggctct
      481 tttgggactt gacagcctcc cctttgaacc cccctcataa ataaagccct cactgtctaa
      541 tggatgcacc cagtgtacaa ctcctgaacg aataaactaa tggctgaatg aaaaaataaa
      601 ctaccctaga accttagcag aagtgtgtgt ttttctt
//
LOCUS       KCPA01003637             508 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 400653tic ultra-conserved element locus
            uce-7113, sequence.
ACCESSION   KCPA01003637
VERSION     KCPA01003637.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 508)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 508)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="400653tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>508
                     /note="ultra-conserved element locus uce-7113"
BASE COUNT          129 a          102 c          108 g          169 t
ORIGIN      
        1 tgagggagag ctgtgaaaga tcatttcttt cctaatgtga ctgttagatt tggctggttt
       61 agcaattaaa cttttccttt atttgttacc cctacagacc cctggttaga acaggatcct
      121 gaagttgagt ccgccagagc attgggctta catgattcaa ttaaccttta aggtagctct
      181 ggaagttggt actctaggag atccttttgt taattggcag cctgacacag acaattaagt
      241 ttgatcagat gaagagggca tcagggacat cattagcata ctgtactgaa gactacgtgg
      301 tgtgtaaaag ttgtttaatt tctgccaagg aagaaagtgg ggggctgggg gagccctcct
      361 tgcacataca gcattttgct tattaaatat ttcatttccc ttgccataag ctgcaaatgt
      421 tcccattttt tacccctcct ttttggtttc ttccactgca gtgaaatcca ctgaatgatt
      481 gttcttccct tactaaaact tctgcatt
//
LOCUS       KCPA01003638             576 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 400763tic ultra-conserved element locus
            uce-4631, sequence.
ACCESSION   KCPA01003638
VERSION     KCPA01003638.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 576)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 576)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="400763tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>576
                     /note="ultra-conserved element locus uce-4631"
BASE COUNT          163 a          123 c          113 g          177 t
ORIGIN      
        1 tgagggtcag gcctaaacct ttccaaagtt gaataaatgt gaagcctgga gctgtcattt
       61 tagtttttca tctctagaat aatgacctct tccggaaaca ggactctggg tagggtctgc
      121 aattgttccc ttgtagctgt tggtctgttc cgctattttc cagcaagtaa attttcttct
      181 cagcgggtga actgcacgac aaaccatagg caaacttctg aaaaactgca aacacttaca
      241 ctttactgca aatgtaacca taacaattca aagtactaat tttctacctc atataatatg
      301 tgtaagtatg ccttagtaac actcacggga aacataattt aacagtgcct tcgtcttcct
      361 tacctcaaga tgggaaattt ctctcacatg cttaacagaa ggctggctgt ctgagcttcc
      421 catttccagg aacatcttga gggaggtttg tttttcttta acccttccct agtgatgtgt
      481 cagcttcact cagctgaaga aaatatggta ttttggttct caagctctcc tgaaagagag
      541 gaatgaaaat gtactctgag tgctcacaag ggaaga
//
LOCUS       KCPA01003639             720 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 400875tic ultra-conserved element locus
            uce-1298, sequence.
ACCESSION   KCPA01003639
VERSION     KCPA01003639.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 720)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 720)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..720
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="400875tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>720
                     /note="ultra-conserved element locus uce-1298"
BASE COUNT          265 a          112 c          107 g          236 t
ORIGIN      
        1 gaaaattgtc ccctttcaat gatgtgctca acttcccctg caaaatactt tgtaatacct
       61 ttgttgtatt tttatgctgt gtattacaca tcaaattata tttggatgac acagtaatgg
      121 agcagggaca ggttctaata ttaaattctt tcctagactt aaacatttaa atgcaagtaa
      181 cttcctccat tcacaagaaa acacagcatt aaaaaattaa ccataagctg ttagatgctt
      241 tacagagccc ccttataaca aaggcagttt taaaaaaaga actgtagtac tgttttcagc
      301 aatttcttta tctctgttct tctaagtaag aaagcttatt aacaagcttt gaacttaaaa
      361 tcacatttac aataatgtgc catcaacagt tttataagct aattagaaaa aaagattaat
      421 taatgactgg ctgctaataa aatggcaatc atgaagaaag aaaccaaggg tgctaagctt
      481 caactaccac caattaagag ctaattacaa acaaattata tatgtgtttt gctgtgggct
      541 ttaatttact aaaatggttt taattaaaag agaaaacatg ctgattaatt gaactgcaga
      601 aaaaatctac agtataaact gtgctttgtc tgtctcttta attagacttg taacatctga
      661 aatctttttt taaggtttgt taaggaaaag atatacataa ttaagggagc ataagaatgt
//
LOCUS       KCPA01003640             523 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 400985tic ultra-conserved element locus
            uce-5443, sequence.
ACCESSION   KCPA01003640
VERSION     KCPA01003640.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 523)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 523)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="400985tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>523
                     /note="ultra-conserved element locus uce-5443"
BASE COUNT          157 a          123 c          113 g          130 t
ORIGIN      
        1 gttcccgccg ggaacggccc gcagcagagg gtgctgtctg cccgcggtag cgccggctgc
       61 acgggaaggt cactcagcct attgataaat cactgtgccg tgattcctaa ctgacagctc
      121 aaactaacat caagctggat gagagagaac aaaaggccat caagcagcca ttttcttgac
      181 acttttattc aatcaccagc agattgctta cgacagcaat agcagctgtt ttgtcttcat
      241 ctttccacat ttgataaaag gtgtcaactc aaatttttgt aaataattca cttaccccta
      301 ctgcacacac cagcactgtt cagcatatgt attctgcgcg agcagatcac tgaggcaggt
      361 cagggctcaa tgatatcagc tgaaggtcat ctgtgatcta aacggaagca ctgataaagc
      421 tacagtccct caaggtcaaa gataagaact acactgagat atttgtaatg tggacgaaag
      481 gttaaacaat agaaaagtat ggcattgttt cagttaacac act
//
LOCUS       KCPA01003641             479 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 401093tic ultra-conserved element locus
            uce-6371, sequence.
ACCESSION   KCPA01003641
VERSION     KCPA01003641.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 479)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 479)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="401093tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>479
                     /note="ultra-conserved element locus uce-6371"
BASE COUNT          115 a          143 c          107 g          114 t
ORIGIN      
        1 aatgccaggg ttgtgccaaa tttccatcaa tgaaatccca gcggagcccc gtcactttgg
       61 tgctaaaagg gatcctccag caaaagggtt aagccaagct ttcagtcccc tggttcaaac
      121 cgcccagcaa gcactccctg cccaaattac agcagcgcgc acatccaaca gatgccgttc
      181 agacaggggc tttccttgcc ctgaggtaca gttcagtttg tccattctac tgtgcaatta
      241 cagaatcaat agaacatccc tttgaaactc cctggactag tgccgacacg cagacagtag
      301 tcaagctgac attttttgct gtttccgtta ttaccaccgc ccgggcgctg cagagctgag
      361 gttttgttcc ttccccaggc gataaaacgg gcaataacgc agcgcttccg aagagcacgt
      421 gtgccccacc ctcctcctct tggaaggaat tgctgagatc acctggcctg ctctgattt
//
LOCUS       KCPA01003642             625 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 401201tic ultra-conserved element locus
            uce-1689, sequence.
ACCESSION   KCPA01003642
VERSION     KCPA01003642.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 625)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 625)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..625
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="401201tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>625
                     /note="ultra-conserved element locus uce-1689"
BASE COUNT          211 a          110 c          112 g          192 t
ORIGIN      
        1 tactttctat tttctcttcc aaaagagaca aagggaataa atacttaaaa cccagtggtg
       61 acgacagtga agcaatcatg cagtcgctgg atacctttgt ctcagggagg catgtagtca
      121 tttttacatg tctgccactg ggtgtcaaac ctttcttttc ttcccctttc cattctggat
      181 ggccaaactg attatctaaa atagaaaatt agcacacaat ggctttactc tgtgataccc
      241 cttatgcaac taatgggcaa agcttgttaa ttggttgtaa atgccagcag gttgccaaga
      301 taatacttca gaaataagcg ggtattctga taattacagc aatcttcatc tataaaagct
      361 taagtagatg aagtactggc tggcttaaaa ccaagattta tcccgctgca ctcgcattaa
      421 aagaaaaaat aagatgaaaa caataatgta gcaaaacaat tatatagcag gaagcattgt
      481 aggttttaga gattgtgaaa actcagaaag taaaacagtg ctgtaataac cagttatgga
      541 aaaataggcc atttacattt gtgtataatt aaatagtagg ctatgcaatt tcacttttta
      601 aagtaaactg ccttttcctt ttttt
//
LOCUS       KCPA01003643             603 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 401314tic ultra-conserved element locus
            uce-6080, sequence.
ACCESSION   KCPA01003643
VERSION     KCPA01003643.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 603)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 603)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="401314tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>603
                     /note="ultra-conserved element locus uce-6080"
BASE COUNT          167 a          121 c          104 g          211 t
ORIGIN      
        1 tgcttttaat cctttacgta accttattaa aaatttcaag atggatacgt tctcccaccg
       61 aatctgacaa acatctggtt tacaacagtc atgtgatgaa attccatcag aatcacattt
      121 gctcttcagt atgttttctc ctagtatcat tcataacaca gaacttctgt gttttgtctg
      181 tgatataaga cagtacaagg atatgttttt attaggaata atgcacagtc gtttccctta
      241 cagaatctaa atctgccatc tctgcgtggg tatagtcaaa tatattgata gcctcccttg
      301 tgggttctgc tgacacttgg gtttaattgt agtgaacttt gaattcctat cttaaggtca
      361 gttattaact attgatggat tctccttttc tccatttaat gctaaagtat tcatactaac
      421 caagatagat gggaatgctg aagaaatttt tcaacgccat ggctgagcaa gataccttcc
      481 tctgtggctt ttctaaaagt ggtgatcact catgttcagc ttgtgctcgg ctgacccctc
      541 gccacttttt gctctgccag tactatccta tatgctgcta ttaggagaaa agaaaataaa
      601 att
//
LOCUS       KCPA01003644             699 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 401424tic ultra-conserved element locus
            uce-2441, sequence.
ACCESSION   KCPA01003644
VERSION     KCPA01003644.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 699)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 699)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..699
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="401424tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>699
                     /note="ultra-conserved element locus uce-2441"
BASE COUNT          210 a          117 c          168 g          204 t
ORIGIN      
        1 ttctttgata atttagtaaa ttaaattcct taaccatatt acgaattaaa gctaacatta
       61 tagctgaaat ttctttgttt gaccttctac tcctagagta aagaaagtct tggctagaag
      121 acagttcaat aaatgatata tattgaccct tgttatgtaa tatgatttcc cttcccttgc
      181 aagggttgcc gctgtacagg atagggctgg gatcatggtc gtggaagcgt atgggaatgt
      241 gtagactaag gaaggctgtc acagcagtca ataagatctg agaggtgttg actaattgcc
      301 tgctaattac acagtaaatt gtctaattaa gctgatggtt aattagggta cgctcgcaca
      361 gcagtcttat ggaatttttg tctgatgtct gggaagcagc ttgtgtaatt ggcaaactgg
      421 taaggactgg cagagaacac gactgggaag cgcgctgcca gtagatgaca gaataaggat
      481 gcgtttgcac aaaggttgtc atgtgaacac gcaggggttt gttagccttc tccagctacg
      541 tggcagccag cacaacgagg aatcgagctg agagctgctg gaagctgtaa ataaaataag
      601 gcttaagcat gtaatattag aaaagcagtg acatgtgctc tttgttttag tcagtttgaa
      661 ctaaacacag ggtatcaaaa ttctcatgta tagaacttc
//
LOCUS       KCPA01003645             320 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 401521tic ultra-conserved element locus
            uce-1597, sequence.
ACCESSION   KCPA01003645
VERSION     KCPA01003645.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 320)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 320)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="401521tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>320
                     /note="ultra-conserved element locus uce-1597"
BASE COUNT          110 a           68 c           50 g           92 t
ORIGIN      
        1 tctttttttt attttatgag ttgttaaaaa gatgcagcct attctaacag gataaatatt
       61 ttaaccattt cacttcgagt taatgaaggc tcacaaatga gcaacactcc tcattgagga
      121 aaacaaaaag ctgttgtcga caaagcgaca gcacacacac aaaagaactg tgtaaaaata
      181 actaactgta ctgtgttccc atactcttta gaacttgctt tacaatggga tgatatgcac
      241 atgatcttgc tgcaaacttg ccatacaact tgcaaataca cgtagcctat agccttacca
      301 ctcagtccag aaagctgcta
//
LOCUS       KCPA01003646             544 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 401632tic ultra-conserved element locus
            uce-7819, sequence.
ACCESSION   KCPA01003646
VERSION     KCPA01003646.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 544)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 544)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..544
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="401632tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>544
                     /note="ultra-conserved element locus uce-7819"
BASE COUNT          153 a          108 c          116 g          167 t
ORIGIN      
        1 cccagtccct gtagcagtca ttgtgtatca attggttatt cttctcacct ccctcatatt
       61 ttattgtgac gaaggagggg gagttgttgc tattgttgca aggaagattc tggaatctgt
      121 gaacacaaag tattagtatt ttaaataatg agaaaaaatt ccacatggaa agctcatctg
      181 gctgtggcag tttgtgactg aatgagagaa aagtgcccta gaagctattc attagtaatt
      241 cactggaagc tctcaaagaa gcctggcaga agctgaaatt gaagtggtct ctgacctaat
      301 tttcttctgc atgaaacatc tgcatcaagg cactctttga tgtattccac ttggctctgt
      361 ctacagtatt gtatcacatg gcttcagcgt tgcctcagtt ttaaaagaca tttccagcct
      421 gtagaaggta atgtgatgtt actgttaccc aaactaatca ctcaatgtgc tcccgaaata
      481 gaaacaatag aggttcagac aacagtgtct gctttgcagt cgttgttgct gcctaagctc
      541 acag
//
LOCUS       KCPA01003647             661 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 401744tic ultra-conserved element locus
            uce-1263, sequence.
ACCESSION   KCPA01003647
VERSION     KCPA01003647.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 661)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 661)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..661
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="401744tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>661
                     /note="ultra-conserved element locus uce-1263"
BASE COUNT          205 a          159 c          135 g          162 t
ORIGIN      
        1 gaaaataatg atgtctccta atgacagctg ccgaagggat ttgtaaaaag ctttctggag
       61 aacctagtat acaaaatgct tggcccagtt gtcattaatt ctgcctggcc cagtcactcc
      121 ctcctgtacc aggagcccac tcctgtgctg gctgatgcaa aggcagtgtg ggacaggcag
      181 tgagagagag cagggcagct gcaaaccaaa atcaccctgg ggaaactaga taaagttttc
      241 aacaataaga ttccagagac tgctgactgg agaaaagctc aatattttag tctcagtaca
      301 aatttgcttc aatcttatac aactcccatg cagcagcatc cacagctgca tgctgtaaac
      361 aacaaacaaa tctatttcca tcagccctgc tgatgctatg agaaaagtgc ctgagcataa
      421 gacatgcaca gatgtagagt ctcacctgag cctagtgctg ccctccattt ggcccctcta
      481 acttaatatc gttgttacaa agctattggt ctcctggtag cgagctggct caatgcagag
      541 cctcttcttc cagctaatct gacaactccg atccaagaag catcaagggc ccaattaaga
      601 agacacatct tatcaaggag cttattttgc ataacagaat acaaatgacg aataaaaatt
      661 t
//
LOCUS       KCPA01003648             735 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 401852tic ultra-conserved element locus
            uce-1631, sequence.
ACCESSION   KCPA01003648
VERSION     KCPA01003648.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 735)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 735)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..735
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="401852tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>735
                     /note="ultra-conserved element locus uce-1631"
BASE COUNT          224 a          128 c          131 g          252 t
ORIGIN      
        1 ttcaattaat gaaaaatggg aactgcttgg ggtatttgca tttttattac tgtttgtggg
       61 ttatgtgtac atttttgtgt gttgaagtac actgtctgtc tgatttctaa tttggagcac
      121 aaatatctct ctttcaatcc accacgtaca tttcaaacaa gctactcatt ctattataaa
      181 actccatagg cttttcctct tctgttgatt ttttttattc tatgcttgtc tcctgtctga
      241 ctttaataat tttagttctt taatacataa aaaatgtaag taaaatatgc catgtattac
      301 gggtatgcac caagtcaact ataatgcagt atatctgata tacactgact gtcatgcttg
      361 agtgaatgtt aatagaattt attctgaagg tacatgttag agacatctac tgtttaacta
      421 tttactatac ctttaagatg aaaagtgggg ttgtcactgc atatttcagg tcacactgat
      481 ggctcaaaaa caaatataca gattcagtac aaatctgcat acctgaagct gagaatacag
      541 ccaggatatg tttcatgctg ctgtattcat ctcactttta acaaaagcca aaaaagtttc
      601 atgtaattca tttcacgcta tgatgggctg ggtctcagcc aaagagtgag atagaagaat
      661 ctggcaaaaa agcaatatag ggactctgtt acccagagac cagtgatggc actgtgcagg
      721 agacactatt gtcct
//
LOCUS       KCPA01003649             857 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 401960tic ultra-conserved element locus
            uce-5019, sequence.
ACCESSION   KCPA01003649
VERSION     KCPA01003649.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 857)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 857)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..857
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="401960tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>857
                     /note="ultra-conserved element locus uce-5019"
BASE COUNT          219 a          146 c          168 g          324 t
ORIGIN      
        1 gtggcatttt gctttcatta tccctcatag atgtttaaaa cagtgcctgg tgttttaaat
       61 tacttctgct ttactttaaa atgagaactt ctgtttgaat agcctattgt tctgttagct
      121 actacattgc acttcaaacc gcagagtgtt attttttggg atcatataaa atatttgttc
      181 tttctctgct cccaacgtat aaacttctta tctcgataag gactttctaa cccttggaaa
      241 tactgcttta caaattcagc taatgaccca aatacagctt gtttgttgtg tatgagttgt
      301 attaaaataa catactctat gtgtattgtc attaatgata tgctcatttt gataatggag
      361 ctgcagtctc ttagtatgta gtccttgggg agatgctgca tttttttaac taagtattgt
      421 tctggctcct ttccttgatt ggcccagaaa tagcaatcag ctggggagca ggatgacatg
      481 cctcttagca atccctttta tctttgagat gagtatcaac attgtatgct tcctaatgga
      541 agtgtaattt aatgaaatct attgggtaaa catacttcag atgttcaaag gaggtgacaa
      601 aatttttgct ggcagccagg acctggctgg tttccagctt gcctttagct gctatgcata
      661 tagcattgag agaggcactt aaaataggaa cacagagtat tgtttctatt gtgtttttgg
      721 ttgtggattt tttttttcac tgttttcaat tttattttct ggtatttgta ctagtgccct
      781 atgacttcca ggcttttcta gtaaaatgct gcctgaggtc aggtttcata gatgacagtg
      841 tttaactcag gggagat
//
LOCUS       KCPA01003650             709 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 402068tic ultra-conserved element locus
            uce-2773, sequence.
ACCESSION   KCPA01003650
VERSION     KCPA01003650.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 709)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 709)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="402068tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>709
                     /note="ultra-conserved element locus uce-2773"
BASE COUNT          193 a           97 c          156 g          263 t
ORIGIN      
        1 tttatattat tgttaatgca ccttggattt aaatgctttt cttttgtgcc attatatttg
       61 attccacggc gagactttct aagaatatga ttaaccctct gggtcatctt ataatgtaat
      121 tattaatgat tgattctgtt tatccttggg atcaatatga gaagcggggt tgatttctga
      181 cattcagtaa acatgatctg gtgacaagac tggtattggt ttattactcg gaacgtgtta
      241 gatgaatctg aagtgtgtaa ttagttttat ataatgatgg tgatatgtgg ggttttttac
      301 atgacttatg ttaatatggc caatagtgtt aacatctcct gccactaata gttagggtgg
      361 ggatgtatag taattgatct tcctgggagt gctgtaatgt aaaaacaatt ccggctgttt
      421 gaagtatatt ttacaagtgt gcattgggcc tttgggatgt tatactgaaa aacccaattg
      481 tacagttacc atgggaaccc aattagaata gattgctgga caggctttca tcttgaccaa
      541 aaatctaatg tactttaaat gttttcatat ggaattttgt tcgtatagtc acttggtgta
      601 atggctgggt tttaatttta gtgctgaaca agagtgttct gttgagggtc ccgaggactt
      661 acccttcaag gagaatcttc ctttagtgtt taaaagttga tgaactgag
//
LOCUS       KCPA01003651             366 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 402172tic ultra-conserved element locus
            uce-4602, sequence.
ACCESSION   KCPA01003651
VERSION     KCPA01003651.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 366)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 366)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="402172tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>366
                     /note="ultra-conserved element locus uce-4602"
BASE COUNT           99 a           71 c           95 g          101 t
ORIGIN      
        1 ggcagggaat gctctgaaat gctcaaaaca gccctttggg aggcctgtgc tctattgttc
       61 ttccatcgag ctgctgagcc cctataaaac acttaccttt cactagtatg attaagaaaa
      121 ggccaatgca gctttcccgc tcactggagc atgaagcgtg tttaatttaa taatgctgat
      181 aaatcttaaa gccaggagca tttggctaac acatgaccca ctttttcaat caattggaag
      241 catttacata acggccttgc agggttcctc ctgtgaggga tgtggagctg ggggggaaat
      301 ggctttaggc tgaaagaggg gaggattaga tgagatttta ggaagaaatt cttccttgtg
      361 agggtg
//
LOCUS       KCPA01003652             658 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 402283tic ultra-conserved element locus
            uce-3262, sequence.
ACCESSION   KCPA01003652
VERSION     KCPA01003652.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 658)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 658)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..658
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="402283tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>658
                     /note="ultra-conserved element locus uce-3262"
BASE COUNT          214 a          145 c          118 g          181 t
ORIGIN      
        1 tacaaggaat aaaacattct tatacttctc cctaaactta tttgcttttt ggaaatattt
       61 atacagcaca aagacgtaag tttagtgaga aatacagcca gttcctcttg cttaattgaa
      121 acatttatgc tttttgttct gcaaaaacaa tgaacagtaa tattgcaaga taaatacaca
      181 agaaacttat agatatgatt gtaaaacaac atcatcctaa tgtttccact taattaccct
      241 gaaatgtatt ctatttaata ttcattactc aaaagccaat ttaaaagaga atgaggtgaa
      301 gggacttatt cagaaagaca gactgtcatt cactgcaata gttatctaat atacagaagt
      361 taataaagca gattaatcta caagtccctt taagccatca ctgagtttag aacaactgcc
      421 tctttgaccc ctaaccctcc cgctgcgcac cagtagcagg tgccagctgc actgaaatga
      481 tggctgaggc gttttaaggc aaagcctttt cttgctttgc ttctgaccag cagctgaccc
      541 tgtagaagcg attgtttcat gtgctggcct aaaggctaca caaaccagca agggataaac
      601 aaaagcagac acggagcagc tgcctcgcct ggggccctgc ggcgccgaca cctcgcgc
//
LOCUS       KCPA01003653             526 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 402390tic ultra-conserved element locus
            uce-6557, sequence.
ACCESSION   KCPA01003653
VERSION     KCPA01003653.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 526)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 526)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..526
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="402390tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>526
                     /note="ultra-conserved element locus uce-6557"
BASE COUNT          177 a          107 c           96 g          146 t
ORIGIN      
        1 tatcaatggg aagctgcaga agcaaccaga gaaaaagtct tcagtgcaag ccaaatattt
       61 ggggaaggcg ggtcaagtga tggatgaaca ggttacaaat aattgtgctg gttctactca
      121 tctcaagccc gccctacact tacacgggac attttagtgc tctaatctgt tgttacagat
      181 ctcttccacg ctcagaaatc aatcacttgg aaagctgatg tggctctgtt acactaatta
      241 aactttgttt tgcaccagag tcctgcattt gcagtgtgtg tacagtatgt aaattacaca
      301 aattacaaga aaagttgatt agcataattc aaatctcagc gcagttacta aaattaacag
      361 tgaatacaaa ttatacagaa tcacttcagt gctgctgaga agctcctaaa gcatgttacc
      421 aaattcacag aagtggacac caaaacaatg aaaaacaagc ttacagacaa ctgttcaccc
      481 aaccttatta attcttcata gctgttattc agggttaaac atttct
//
LOCUS       KCPA01003654             479 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 402496tic ultra-conserved element locus
            uce-3194, sequence.
ACCESSION   KCPA01003654
VERSION     KCPA01003654.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 479)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 479)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="402496tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>479
                     /note="ultra-conserved element locus uce-3194"
BASE COUNT          141 a           79 c           94 g          165 t
ORIGIN      
        1 ctgctcctac ctgtgacaca tgacataaac gcaattttga tttcagtagt agagggaatt
       61 ctctgaaatt tgtgaaagat ataacatttg attgggggta gttaatcagt gttaaccctg
      121 agcagctctt gggctttatg gattcaagca ttatatgtgg ttgcactgct ccagcaaaag
      181 gttaagtatt aatggaaaat gttcacagct cttttactca aagaaaacat gttacttgta
      241 agttttcttt tgattttact tttacagtta cattgaatgt cttcattcat ttagccatcc
      301 ataaagcaaa tattgttgca catgcagtgg ataataagtc tttttaggac tacttgtgtg
      361 gtatgtcaca gatcattaac tgcaactaac cacctgactt gagggaagtc tggaagcatc
      421 attacagtga agtaagcttt tatttctgta tcactgcagc acattgattt gtaggaatg
//
LOCUS       KCPA01003655             724 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 402605tic ultra-conserved element locus
            uce-5494, sequence.
ACCESSION   KCPA01003655
VERSION     KCPA01003655.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 724)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 724)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..724
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="402605tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>724
                     /note="ultra-conserved element locus uce-5494"
BASE COUNT          238 a          145 c          153 g          188 t
ORIGIN      
        1 ctgctgtcat attggtgaca tgacacagat attgtcaaga aaaagtaaac tggggctggc
       61 actcaaaggc agctcgtgaa gagatgagca gtcgaacagc catattcaat aaaaaagagg
      121 aacaggattc ctttacaaaa tgtattgctg ttgtggcaac gtgctgctgc cactgaaggg
      181 actgatttgt tatttagcat gtagtcttgg actgtctgtc attctgggtg ctaatgctct
      241 gctaaaataa ctcattggga gctgtcagtg ggatgtttac ataggccccc aatcttttct
      301 tcatacaagg aaatttttta ctggaattca tcttcttttg atctcacatt caaagcaaca
      361 gcagcttgat agacatgcaa gtctgaaagc aaatccagac gctgaagata aaccgccaga
      421 gtatgacagg caggagcatc taaagcttat aaaaatgaag agaacagcat gtcgtctgag
      481 tattacaata gcagaaatca agagacatat taggtggaac tgatcagcca caaaaacagt
      541 tcaaaaggca gatcatagaa acagaagact aagctagaat aaaattggaa agatctgctt
      601 tacagaggca tcacctcctt tctgagcacc gcagcgtttc cgctccagca tgtaaactta
      661 aaaaagaaca gggctggtgc tgtctctact aactttctta ccttcaactc accaattaat
      721 ttgc
//
LOCUS       KCPA01003656             540 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 402717tic ultra-conserved element locus
            uce-4917, sequence.
ACCESSION   KCPA01003656
VERSION     KCPA01003656.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 540)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 540)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="402717tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>540
                     /note="ultra-conserved element locus uce-4917"
BASE COUNT          188 a           81 c           87 g          184 t
ORIGIN      
        1 aaagcttctg atgatgctca tattttcaaa gttctaaatt ttataaagaa gtattgttac
       61 gagttttctt ttgatttcca aggtgaatgt tcaaaaaatt cttagacaag tgtgtgtatg
      121 cccttcaaag taattagcaa gtttcaacag tgattggtac aaaacaatta ttgtcattga
      181 tcagcactga acagataatt ttaaacaaag tcattgtgtg ctcagcagat tacagcttgt
      241 taacgggcaa gttctaaatg acctcttaag ctagtcaaat caatgatgca tattcctcat
      301 taagtaacat caaaatgtaa gtggtcttat aaataatgtt tattttaagc actaaaacaa
      361 atggcaaaac cttgatatat caaaagccat ctgctcgtgg tttttttttg caataggatt
      421 acttttgttg ctgaaaattt acagcaattt taagagggag aaccatatct tgcctcaaac
      481 tgaaactgat ttaaacaaga tctctgattt aattttaaca ggtaaaattg atagctcaga
//
LOCUS       KCPA01003657             679 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 402826tic ultra-conserved element locus
            uce-3492, sequence.
ACCESSION   KCPA01003657
VERSION     KCPA01003657.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 679)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 679)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..679
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="402826tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>679
                     /note="ultra-conserved element locus uce-3492"
BASE COUNT          229 a           98 c          137 g          215 t
ORIGIN      
        1 caggatgttg cataaaaata atcacaggat tcatagcggg gagaaacatc ttggcttcag
       61 ataacaacag tgctagttcc cacgtaagtc atgctatact tgttatgttt aggagaaagg
      121 aatgagtaag tggttttgca tgcaaagttt tactaaaatt actcctactc tcagaataaa
      181 ctacagagtg caaatgccag ggtgattttt ttgttgctgt tgttgaagac atggtagatt
      241 ggttaaggta gagaaacaaa tgtagttgct ttgatttatc acttgtgaca ttagcgtgta
      301 ctatactgtt ctcctggaaa caaaatggtt gcacctgagg acagtgatat aaacactact
      361 ttgattattt gaaacaaacc attaggcttt gatgaaagaa ccattacttt agtagacctt
      421 gtacagagag cgcatttgga gataatggat gagcagccta caaattgctt gctttgaatt
      481 taaagaagtc acatgtttgt ttgaacttca tggcataaac agatatcagc aagacaagct
      541 aatggcatac ttaaaatgtg gttgaaaaac actgttgcaa agtttacttg caatacttta
      601 attttagagt gcatactgaa gaaaatcaat tcaatgtttg atgtgtatac aagatacaca
      661 tttatatatt tgtattaaa
//
LOCUS       KCPA01003658             571 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 402938tic ultra-conserved element locus
            uce-5346, sequence.
ACCESSION   KCPA01003658
VERSION     KCPA01003658.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 571)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 571)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..571
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="402938tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>571
                     /note="ultra-conserved element locus uce-5346"
BASE COUNT          127 a          134 c          172 g          138 t
ORIGIN      
        1 ccctgttcta ctcccgagct acctgcacct ctgcttaggg catgtctgga ggcacagctc
       61 tctttgtgtc cctgagctta atgctccttg gagagacttt gatggcacag gaggcaccgc
      121 cgcggtcctg gctcctgtaa agcccagctg gaggccggtg atctcagctc agcccatttg
      181 ccccgctgag gagtagagat tataatggtg tgttgtatat tttttaattt cctaaaggta
      241 actgttcagt ccccacctaa ttttacacag catgtgaggg agcagagcct ggtgacggat
      301 cagctcagcc ggcggcttgt ccgtacctac cagctgtaca gccggaccag cgggaaacat
      361 gtgcagatct tggacaacaa gaaaatcaat gcgatggcag aggatgggga tgtgcacggt
      421 aaggacacat gatgtgggca ggcgggggga gctggggagg tgttcgcagc ccagctggcg
      481 attgatgatt tccgtcctgt ttgttagcca gaaatcgtta aaatcgttcg gcttgtgggg
      541 gcttgtaaaa ggagaacata ggggtcagta a
//
LOCUS       KCPA01003659             461 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 403039tic ultra-conserved element locus
            uce-6427, sequence.
ACCESSION   KCPA01003659
VERSION     KCPA01003659.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 461)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 461)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="403039tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>461
                     /note="ultra-conserved element locus uce-6427"
BASE COUNT          148 a           87 c           68 g          158 t
ORIGIN      
        1 tgcccatctt catgtacctt ttccatgtca gttctgttta ctaagtgata ttcaacagat
       61 ttcctatagt gcaatgaact taacaggcag cttttaattg ccttgcatag gaaaccacat
      121 cactattaat tccacagcaa cagtataaaa taaaactatt gcttctcaga ctctagagca
      181 attagacctc tcggctattt ggctaactct gcttcatgat acccagtgca gttaattata
      241 ttttttgatg ttaatagtct ctgtcagttt caagcataac tcctctttga tgaatattta
      301 aattatattt gaataaaaaa ataatcttgg ttacatttca tattcagcag tcatcacagc
      361 ttaataaagg tctcctcaga aagggttgag ataaatggct atatgaacac atgtatgaag
      421 tcctaaatca acttatcaga taatgtagct gttttggcaa a
//
LOCUS       KCPA01003660             486 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 403149tic ultra-conserved element locus
            uce-309, sequence.
ACCESSION   KCPA01003660
VERSION     KCPA01003660.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 486)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 486)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="403149tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>486
                     /note="ultra-conserved element locus uce-309"
BASE COUNT          159 a           94 c           78 g          155 t
ORIGIN      
        1 ttttatagac ctctcattaa aagtcacctt cagaaaacac tgctgcacct tacttataat
       61 caaatgacac ctcataacca cctaaccatt tttaatatcc cctagaatct attgtattat
      121 accaaggctc agacactgtc taggtagtca aggaaaggag tataccatca tatttaaaag
      181 cagttattgg gacagctttt acaggcagtg ggctaagaca attcagaaac aattgcttat
      241 gtgatagttt gaggatttgt ccctgtcaaa cagttaatat tgctttaata catgaagtag
      301 gctgtataag acagcaataa tgaaaaatgt caggaaagac aatatcaatt gttattcaac
      361 atccacatca aagattactt ttttgtcagt agctttcaga aaatgtattt tccatcagat
      421 ctgattgcgt tcctctttga agtgctccat cctcctggta gatttaatgt gacatctagg
      481 cacttt
//
LOCUS       KCPA01003661             417 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 403255tic ultra-conserved element locus
            uce-6353, sequence.
ACCESSION   KCPA01003661
VERSION     KCPA01003661.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 417)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 417)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="403255tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>417
                     /note="ultra-conserved element locus uce-6353"
BASE COUNT          119 a           81 c           93 g          124 t
ORIGIN      
        1 cgcatataaa tcattattgg cgaacatctc agctcttgag ccaggctgtc gcttgctgct
       61 gctcgtggtg cagcccagac ataaatcata attcccctac aatagatcct tttgcagccg
      121 ccatcaggaa aagtgtgttg gttttatcga ttttttgaca ccagggccct ggcaacggcc
      181 gctctgaatc attatgaaat gaaactgatt aggaattcat ggaatactaa ataaacttta
      241 cgagcccgtt gtaagttttt tgatgcatgg ggagcggaaa atgaaaacta atgatataaa
      301 aattacacag cgtgctgagt attattatac tgctattgat ttgtttcaaa ctgtacatca
      361 aaatcgaagt gtgctgggtg tgcttggctg caaggctgat gctcaaaagc ttttgag
//
LOCUS       KCPA01003662             651 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 403363tic ultra-conserved element locus
            uce-2937, sequence.
ACCESSION   KCPA01003662
VERSION     KCPA01003662.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 651)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 651)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="403363tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>651
                     /note="ultra-conserved element locus uce-2937"
BASE COUNT          215 a          132 c          115 g          189 t
ORIGIN      
        1 ccaagttcat tgtactacat ttcattactg ctcttcttcc ttctacgtga agactaatgt
       61 aaagacaatc actaaagaag cagcaatcat aataccctat actaactaaa ttcagactta
      121 cggctaccca caggagaaat acatgacaga tccattgttc tgtattagca ggatattgtc
      181 ccactatatg aacacatgca aactttgaag gctttgaata tttaaggcaa gacactagtg
      241 gctcatccca gtgggaacca cagaaaaggg gaacctgatt aaatttaatg tcattgtcac
      301 ttttttttcc attgctaaga attatatagg tagccatagc taccacactg ttcagacacc
      361 atgaccacaa tattctccct cagaggttgg cgtcaagggc tgaattattc actccaagaa
      421 tgcgattcat tactagatgt gattctctcc gattaaatga tttgtcagta cataaaatac
      481 gtgtacatat aaaatcgctg ctatgcgaaa ggaaccaatt tttattggta ttggagcaca
      541 tccccattga gaaagttctg aagtaactga gcagcttttt actgtttact gtacaacaaa
      601 ttatgaagtt gaaaactagg gcaggaatat gcaggaggct acttacagac a
//
LOCUS       KCPA01003663             542 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 403471tic ultra-conserved element locus
            uce-4070, sequence.
ACCESSION   KCPA01003663
VERSION     KCPA01003663.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 542)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 542)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="403471tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>542
                     /note="ultra-conserved element locus uce-4070"
BASE COUNT          193 a           97 c           82 g          170 t
ORIGIN      
        1 taaaataata ataataaaaa tatttgaagg tatttttaag ataatttaaa tataggactc
       61 ttttcatcta gctatcactg cagtaatata aatgaagcaa attaatttta atgctccaag
      121 gtactaattc tgtgtcactg tcactgacag gatccaacta gactttatga gatggcattt
      181 gactttatgg aagtgagcac tatgcacgca tttacaattt tacagggact ttaagctgtc
      241 atgctgaaaa atgtttataa aacattaatc aaaaaatgcc tctttaatac aatgcattgt
      301 ctgaaagatg ttagaaggca catattgtaa atggattctt tttctgacta aagtaatttc
      361 taccaaaagc ctttccccac tgctatacaa gtacacagtg tggagagata aagagcactt
      421 tctcagcaca ttactacctg atccaaacac ttgggaaatc actaatgtac agcatgccat
      481 atttccatgt cacacatgac acatttgtct aaaattaccc aacagagttt gacattgcag
      541 ca
//
LOCUS       KCPA01003664             514 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 403578tic ultra-conserved element locus
            uce-5918, sequence.
ACCESSION   KCPA01003664
VERSION     KCPA01003664.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 514)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 514)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="403578tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>514
                     /note="ultra-conserved element locus uce-5918"
BASE COUNT          183 a          100 c           89 g          142 t
ORIGIN      
        1 tgactggcat caagaagagc agggtcactt tgggaaaatc cattctcagc aatgtaaatt
       61 acagagttat cctagaacaa gagagagcag aagttttatt cagaacagat gtaagaaagc
      121 ccataaaatc agatgcatta ccctctatct tttctaagct acaaactaaa actagttttc
      181 atcaaattgc actgacccta ttaacttaat tttccatgaa gtgacctttt atgactaaca
      241 atggaaaagc aaaactgtgc aaatatccat gaagacagtg aaatgactta ttttaatgag
      301 aagactaaaa tatctttcct gcattagcat ctgcttattg tcactgctcc ttaacccctt
      361 gatactggca gtcactacac gtctccttgc caggagtagc tgtatgccag gaaagcctta
      421 ctgctggcat cagaaagata atttctggag ttcaaaagac atgtgtcatt tcaaatagta
      481 aaacagatat caagaaaggt aataggaaaa cact
//
LOCUS       KCPA01003665             776 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 403690tic ultra-conserved element locus
            uce-4068, sequence.
ACCESSION   KCPA01003665
VERSION     KCPA01003665.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 776)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 776)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..776
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="403690tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>776
                     /note="ultra-conserved element locus uce-4068"
BASE COUNT          223 a          142 c          159 g          252 t
ORIGIN      
        1 tttgtttagg atgcaaattg ataaagagta atgactgtat tctcatatct gagcattcag
       61 gctatttgcc agaatctgcc agagtctact gttgcagaaa ttgttaattg tgctagtcct
      121 tttgaatata gatgttttcc tgaagtcacc aacaatataa taagccagta aatataagtt
      181 tgacctgctt gttattattg tgagccctgg gtatgtcaaa ggcttttcac caagtcaggg
      241 ttattaatca aacgtgactc ctctttattg attagacctc aaatggttgg gttatatgcc
      301 accctgttta tatattgcta tttaatttgc agccaccctt cgcgcactct atctaagtga
      361 caacgatttt gaaatcctgc cgccagatat tgggaagctc acaaagttgc agatagtaag
      421 taatttatct aaattcttgg aaaatcaatt cacttttgca acacttgtag gaattgaatc
      481 cagtcaattt ttgcaggaat agaccactac acctggcact gtttcttctt tactagaaga
      541 cacttgtaaa tagattggaa gaattgaaca ttcgggagaa agttgggggc agagggagta
      601 gagttctctt tcggggtgct ttatggtaac tgaaaatcgt tgtgactgaa tttattttgc
      661 tcttagctga gtcttagaga taatgacctg atatcactgc ctaaagaaat tggtgagctc
      721 acccagctta aggaactgca tatccaggga aatcgtctta ctgtgctgcc cccaga
//
LOCUS       KCPA01003666             752 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 403906tic ultra-conserved element locus
            uce-333, sequence.
ACCESSION   KCPA01003666
VERSION     KCPA01003666.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 752)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 752)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..752
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="403906tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>752
                     /note="ultra-conserved element locus uce-333"
BASE COUNT          219 a          133 c          138 g          262 t
ORIGIN      
        1 catcctagga ttctgtcctt cactggagtt ttaggtacag tttaataaaa gctaaacctt
       61 gtgaagtttt aaaacaggaa aataagttga cttacttgga tgttatggaa gcagaattgc
      121 ctcttgcttt tatttaggaa tgaaaagtta agctgtgcat tacaacagta tttctggagg
      181 agatccagca aattgatata taactctgca caagtctacc aattgctttt taattggtat
      241 tatagacctc actctgaagc taggatgttt tattctccta tgtgtgaata tgtgctatga
      301 agtttttcta attgatttgc tttgcccatt ccatttgatg tatcattttt cacaatattt
      361 cataatttgt gctcatttct aatgaacaga gtcgttagga caggcatgtc taagtacaac
      421 tgacagctaa cattaggtgc cagatgcagt ttataaagct atgtagaact gcagagaaca
      481 gtttaaataa attagcacct gtacattagt ctcacttgct ggtaatttat aagcgaatca
      541 gtagagatga catttaggta agtcattgat caagttaaca gctgcatacc cactgcccag
      601 ctggggtacc taattaatag agattgcagt cctgacctag tgcttttccc cgtttgagac
      661 tgtaatcctt ttattttgtg atttaacttt caacttacag ttgtagtaaa cagcccagtc
      721 attttccact gtcagttctg tgatattcca ct
//
LOCUS       KCPA01003667             687 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 404017tic ultra-conserved element locus
            uce-4146, sequence.
ACCESSION   KCPA01003667
VERSION     KCPA01003667.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 687)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 687)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..687
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="404017tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>687
                     /note="ultra-conserved element locus uce-4146"
BASE COUNT          214 a          153 c          133 g          187 t
ORIGIN      
        1 aagtgtgcta atcttacatc aacaaccagt ttgcttcaga aaataacgta ccctgtgttc
       61 cttcaaacct tcctgagttc aggccttctt tcttggaatc tgtggcaaaa ggtttgcatc
      121 cccctgtaac tgtgacactt ggaaagacat ttgatgggga aagaaaggcg cttatcagat
      181 tagaactggc agagcaaggc gctgtcggtg atgtggaaga ggtaccactc acgtgtcagc
      241 tgtgctccat ggaaattaaa gctctggcaa aagggtctga agcaaactct tgaaaaccac
      301 aatgtcgatc atattaaaaa cagcaggaga ggagaattaa gaaagaaaag catttctaat
      361 tctctttcaa acatgctgat gctgccaagc ttttgtcata acagagtgct cacattacac
      421 aaacagccat catattctac agccattaat aaatagttat tgtccttacg ggtacagcct
      481 cactacccat ctcccctggg cttgggtatt ctaaataaag ggcccaggca aaccttcacg
      541 gaattctgct ctaaagccat ttgtgggttc gagataaaca tctgacattt ggatcacaaa
      601 gtgcatctgc agccaattaa aatactacta aattaacagc taactttctc ttgttttgtt
      661 cctttaaagc ctttcagaac aaccaaa
//
LOCUS       KCPA01003668             520 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 404127tic ultra-conserved element locus
            uce-2321, sequence.
ACCESSION   KCPA01003668
VERSION     KCPA01003668.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 520)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 520)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..520
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="404127tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>520
                     /note="ultra-conserved element locus uce-2321"
BASE COUNT          171 a          106 c           98 g          145 t
ORIGIN      
        1 aatgctaaga attaatatgt gaacaacacc taagtaagaa aaaatgtgca tgcaaccagt
       61 gccatgtttc aaagcaactg tcctcggtag tgctgaggta catatttcta tacctcccca
      121 acagactaga aaagacaaag catataataa agccaagcac aatgaaagag ctctgaagag
      181 agagctgaaa agtagctatc atgttggcag ataaattcta cacacaatta ttcattccta
      241 gcctcttgac atgtagatta atgagtttga taacccaggc ttctaagaag tagattcaac
      301 tgtttcacta gctttcttct cctcttctaa ctacaaacaa cactttggtc tacaaatcaa
      361 tacatttgct ctggtcatca acatttttgc aattgaagtc ctatgtcaaa atatgatatc
      421 tgctggggga caaggctctt tagtggccct gtcaggaatt cacaggggct catgtgatca
      481 ctggagggag gtgcttccat gctgagttca aagtcatata
//
LOCUS       KCPA01003669             722 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 404236tic ultra-conserved element locus
            uce-526, sequence.
ACCESSION   KCPA01003669
VERSION     KCPA01003669.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 722)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 722)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..722
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="404236tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>722
                     /note="ultra-conserved element locus uce-526"
BASE COUNT          240 a          124 c          148 g          210 t
ORIGIN      
        1 atctcacagc aggctgtttg aatgtgatcg tgactatggt aattctggaa aaagtataga
       61 ggcctctcca gtgcagcaca tgctgaacag aattaagcac aggttagcac atatgcttgt
      121 gtggtcccag attgagtcgg ttgctgtggt ttctgatgta taaaactatt aatgctctag
      181 actgtcgcca aacataatat gaagaaccac ttattcaggc acctgatctt tagaatgcag
      241 catcgtttgt aacaatttta acgctaacta agtacacttt gatgagacag catttaataa
      301 aatgctcatt aatttcatca ttagcaaggg tatgctaaga agtaagccag tttcttatgt
      361 cacgcccaat tagcatccca tgctagtaat cccattagta ttgttgaatt cactaatgga
      421 aaaactaatg ggcatgctac cagggcacat taattgggca tgacaccagt tctggtttta
      481 attattaaac tacgataatg aaatgtgtgt gtttgtaaaa tattaaaatg ttgaaatagg
      541 agagaagaca ataaaaaata gtataagaaa cattagtatg tgaatagctt tgtattctta
      601 tggggcagag gctccaaacc tcctcagtag caggacattg gctgattgga gctggaaaca
      661 tgctgtaaat attcacagga aataaaactg cgtacatatg tgcacatcag atacacagtg
      721 ac
//
LOCUS       KCPA01003670             562 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 404342tic ultra-conserved element locus
            uce-4697, sequence.
ACCESSION   KCPA01003670
VERSION     KCPA01003670.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 562)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 562)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="404342tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>562
                     /note="ultra-conserved element locus uce-4697"
BASE COUNT          163 a          126 c          135 g          138 t
ORIGIN      
        1 gtgcaatgac tggattgggc aacccaggtg caacagtaat agctgcacag aatagaaaca
       61 tttcctttag acaaactatc ccaaaggggt tataaatagg aaatggacat taccatgaaa
      121 agtaaagctt ccaatgtgac tgcatcttgt gtagcgcact tggacattaa actatgaaga
      181 attttttttc ctgtcaagtg ttacaaattg acgaaataag tacatcctca gtcattatct
      241 tacttcagtg gcactttgtt ttagtgagac agcggagacc agacagcccc agtgcagttt
      301 atcaatgaaa atctaatatc gtccataagc aggggagtgg aaatcaatac ttcattacca
      361 aattgttagt gaggatgaag aagaatagca ggagtttttt ggcagcctcc tcggtccggg
      421 ttgctgggag ttcaatgtca gggcctcggt ggcgcgcggg gccgtggact aaggcattcg
      481 tcctgcacaa caacaacaac acggccacag ttaccccgcc agcgagacgt ctgcgaagct
      541 cggctttgct ccgcgcgccc ac
//
LOCUS       KCPA01003671             619 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 404453tic ultra-conserved element locus
            uce-3722, sequence.
ACCESSION   KCPA01003671
VERSION     KCPA01003671.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 619)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 619)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="404453tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>619
                     /note="ultra-conserved element locus uce-3722"
BASE COUNT          197 a          122 c           92 g          208 t
ORIGIN      
        1 ttttagataa taatcaacat ttattatttc tccttccaaa ataacaagcc atgtatagac
       61 tgatgctgaa taggagggga ggacagacat ttttttatct tgccccctat aatagatttt
      121 tccttttgct caattctctc agtgaataac aagagtggca gccattttct ctcagctcaa
      181 catcaaaacc cctttcatct gctgtctaaa tgcaaacaaa gcaaaccttc caccaggcct
      241 ttctttccag ataaattaaa actctcatgt cctggggcct aaatcaagcc tacaggcctt
      301 ccctagataa atcctttctc aacctgaaat cttcttgcta cacgtgctcc ttgtaagata
      361 attttgcagt agctaatcaa taatgcaaca gtaaattgca tttaaataaa cattagcggt
      421 cctcttaatg aataaaacct catttgcaat ttgtcaaagt cacaaatgct ggactctttt
      481 gatattcatt agaatattgg aaattggagc tttgacagtt tttatgtatg ttgcaattat
      541 gatttttgtg aataaaagaa gtgctttatt ttcacaagaa ttcttgaata aaaacagtga
      601 tatatgctat ggacgtgat
//
LOCUS       KCPA01003672             690 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 404561tic ultra-conserved element locus
            uce-1814, sequence.
ACCESSION   KCPA01003672
VERSION     KCPA01003672.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 690)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 690)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..690
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="404561tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>690
                     /note="ultra-conserved element locus uce-1814"
BASE COUNT          220 a          149 c          135 g          186 t
ORIGIN      
        1 tcgcattgcc aatgtgcccg gccgcattct cagcctccgt gcaatgctcc atgacaacaa
       61 ggtgagacgg cagaggttac ccgaacagct gcttcctaag ccagaaattc caggcattga
      121 aaaccatctg tctatacatt cacaaatgta tataagggca atctatcagg ctgcggcact
      181 gcagctgcca ctccatcagg cctgcttcct ttctccaggc tgaacaataa gagctagttc
      241 ttcactttgt gtcacacaga atggctgatt tgattaagtc cccaactctc attatgctag
      301 gtaggggtgt agaatttcaa tgataatcca taatgcatga ccagtttgtc gccatggtaa
      361 cataaattca aggttactag ctcagacgca taattgggtg tgcattgagt gctgaagaag
      421 ggctgttaaa attcttgtca tagaagagta gcatccatca tacaaattgc aaagtactca
      481 taatcagaaa gaaaaatcct tggagaaaaa tgttaataaa ataatgatta catctaatat
      541 aattgccaaa gtgtttaaag tattttagtt aataagaatg gaaaaggcaa ctcattaact
      601 gcagaagact tcgtttgaac attccccacc ccccaatatt tgcattgtaa gatggaccca
      661 aagcagttca gctctgaaac tgactgatta
//
LOCUS       KCPA01003673             387 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 404659tic ultra-conserved element locus
            uce-5611, sequence.
ACCESSION   KCPA01003673
VERSION     KCPA01003673.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 387)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 387)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="404659tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>387
                     /note="ultra-conserved element locus uce-5611"
BASE COUNT          119 a           68 c           61 g          139 t
ORIGIN      
        1 ttttgtgaac ttgtttaaaa gggtcaaaaa tgtgtttgag ctgtacaaga ttaaccttta
       61 ctcgtttggg aaaatgcaga cttcaacagc attcctctgc agtggttgca cttgctaaaa
      121 gtttaaaaca gtaatttttt cccaagaaag gtcatcttga gctaaaatgt caaataaatt
      181 atttagatta ctgaattaga aaagtgagga tctgacaggc tgaatttttt atgcacatta
      241 gccacagtca gggtctctat atgctctttc tattaagtgc aacctctctt ccctattaag
      301 aatctctcaa tttattacaa tatattctcc ttatgatgta tctttgcatc taaatagctg
      361 gtccaatttg cttcttactt atacaaa
//
LOCUS       KCPA01003674             322 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 404764tic ultra-conserved element locus
            uce-4210, sequence.
ACCESSION   KCPA01003674
VERSION     KCPA01003674.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 322)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 322)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="404764tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>322
                     /note="ultra-conserved element locus uce-4210"
BASE COUNT           90 a           54 c           58 g          120 t
ORIGIN      
        1 agtctaattt tctttgatct tgttagttcc ttacaagtct ccccgagaca ttctgcagtc
       61 attatcacct ttttttttta acattggtgc atatatgctt gggatagagc tcatgtaatt
      121 atccaatcgt attgattgta tgtgattgtg ccctgcagag gtatatttaa caaaggatag
      181 tctaggtaat aaaggagacc atgaaatttg ttgagtcagg ttatgaacta tttctaaatt
      241 tatttaggat catagataag tgaaaatcca tccgctgttc tcacgaatca gtgcttaaca
      301 aaatgttcat tctctccttg tg
//
LOCUS       KCPA01003675             621 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 404872tic ultra-conserved element locus
            uce-2055, sequence.
ACCESSION   KCPA01003675
VERSION     KCPA01003675.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 621)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 621)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..621
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="404872tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>621
                     /note="ultra-conserved element locus uce-2055"
BASE COUNT          214 a          108 c          128 g          171 t
ORIGIN      
        1 acctctaaaa tcccttgttg ttctcagtcc acccttgtac aaaaaaaaga tcaaatataa
       61 ccatttgttt atcaattgcc agacttgtcc atacaataaa tgaaggggga gctgtaattt
      121 agatgttaat ttgcactgtg cgttctttaa tgaattaaac aatgaaggct tataatacat
      181 ggaaatacaa ccaaatcttt gaaacacaca ggcattggct cacaagacag ctgtgcagtt
      241 gacaagtaac atgagcctta tgtgagaaga aggggaaatc gtaagatttg catataatta
      301 ttgagatcat gcaaatgtca gttatgagga ggggaaaaaa acacaggcat ctcactgtta
      361 aatcctgaca gttggcatca ccgaagaact caaatacact tgagcactgg ttggcagagg
      421 gtcattaaaa cagaatttgc agagacatta gctccctcac ttttctttga gtgacgtttt
      481 actattaata gtttgcagag gctttgcaga aaacatatta ataagagaaa ctgtaatggg
      541 ggtatctaca gcaagtgcaa atgtataaag gggtgcccaa gaagctagcc tctaattgat
      601 cagctagtgc tatcagtgtg a
//
LOCUS       KCPA01003676             498 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 404979tic ultra-conserved element locus
            uce-5029, sequence.
ACCESSION   KCPA01003676
VERSION     KCPA01003676.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 498)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 498)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="404979tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>498
                     /note="ultra-conserved element locus uce-5029"
BASE COUNT          139 a           85 c           85 g          189 t
ORIGIN      
        1 tcttcctgtt acctgttagt gtgtgctctg attctctgtt tttatgtaaa tttgcttttt
       61 ctagttaaaa tattctttta aatgttgcca aagctcatta tgtctttgga aagtagaaga
      121 tatatgaagg tgttgaagaa ctaactctca gatttatcat acctttgatt gactggggaa
      181 atgactttca gttgacatct gagccaacaa gttagctgaa ataaaatttt gtttaatacc
      241 tttgcatcaa taatctaggc acagcatcat tgattgagaa agtctgatca atagagtatt
      301 actgactgcc taactgtaac tttgccagat tttttgttaa ttctgctgat gaccttcgca
      361 ccaccgcttt tcaggttcac tgcctttgaa attcaatttg ctccatttgc tattatttaa
      421 ggaatttaca cattcaattg atttcactct acctgataca ttgagtttag cacacaagag
      481 attgtgaatg tttgggat
//
LOCUS       KCPA01003677             568 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 405089tic ultra-conserved element locus
            uce-4457, sequence.
ACCESSION   KCPA01003677
VERSION     KCPA01003677.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 568)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 568)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="405089tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>568
                     /note="ultra-conserved element locus uce-4457"
BASE COUNT          167 a           99 c          106 g          196 t
ORIGIN      
        1 ctctagtata accttagctg tctggaaatg agctaattaa attttttggt gtgtctttta
       61 gagaatacat ttgcatctga cataattagt ggtaggcaga tccagttata tccaggggga
      121 atctcaagac aactgctttg ctgactatta gtgcctaatt tctgaatgtc aaatcctgca
      181 catcttaatt tctagagaat aagctcaatt gaacttgctc cccagttatg caaaaactgt
      241 tcagataaaa ccaagtggac acgaatgtaa tgaatgtggt tattaaattg tttcaattga
      301 aagaacccta ttcttatacc atcataatgg gaacaattta tccccactga tcagcctgtc
      361 tcttttttct gagctctctt tgatcttgaa gcatattgca gtggtgtgtc ctattgaaaa
      421 gcaaaactgg ggcaatttta atgcttttgt accttaccag tgctctattt tttcgttgtt
      481 taaaaatagc tgttaattat aagtgcagtt taaatgtctc aagtgaccca gaaatgcagg
      541 ttggaatgag acagattgtg tgtctcat
//
LOCUS       KCPA01003678             498 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 405200tic ultra-conserved element locus
            uce-3702, sequence.
ACCESSION   KCPA01003678
VERSION     KCPA01003678.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 498)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 498)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="405200tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>498
                     /note="ultra-conserved element locus uce-3702"
BASE COUNT          137 a           97 c          101 g          163 t
ORIGIN      
        1 aataaatata tcttaaaatc aaaaccattt tgcgttgctt aactgagtgc ataactagtc
       61 ctttgtacac atatttgtac aaagtgttgc ctgtaatttt aaagatgctt gcctcgggga
      121 ggtttcgttt ttccattgaa gtccccttga tttactgtac gcaatatgtt acagcttcct
      181 tatttgctcc tttgggacag ttactgacag taaatctcta ttaaaatatt cttccatatg
      241 gttgcatgaa aattttattg cagtgagcct gaggctgaag gtcacagctg agtagctgca
      301 gttaagtatt gcagtctatg gactctgagg tacatctgtt ctgggagctg gagcaaaatt
      361 agaattttac tgtcaatagc agttctccaa aactggttcc atttgtttac tgtcgcaggc
      421 ccacagcaag gcaataccca ccactaggca ttacaggccg tggtggctgc atgatttaga
      481 tcaaaaatta cagagtct
//
LOCUS       KCPA01003679             441 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 405309tic ultra-conserved element locus
            uce-7091, sequence.
ACCESSION   KCPA01003679
VERSION     KCPA01003679.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 441)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 441)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="405309tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>441
                     /note="ultra-conserved element locus uce-7091"
BASE COUNT          150 a           81 c           90 g          120 t
ORIGIN      
        1 tcagtttcaa tcagcagaga gcacatgtgt atacctgata aacttgtcaa tgccttttta
       61 aaacaggatt ccccaatcta ttctgttcaa tttttcacca tttcaagtag aatcttgata
      121 agacagagag cagctgtgta tagcaagctc aggctacaac taatttgtgc agaaaaaatt
      181 aaatcaggag gtaaattatt tcatgattgc tcattcccaa cagagttggg catcattctg
      241 aagaaaatat caaataattg gtttcagacc atgtcagaca catgcaattc ccttctctaa
      301 tggctatgtg aggtaggact aggcctcagg ggtcaccaaa gaactgaaaa tagcttagtg
      361 ccaggcagag caatagagag acagagcaca taggaaatga aagtgcaatc tataggggaa
      421 atgtgcttca cttggaattt a
//
LOCUS       KCPA01003680             447 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 405408tic ultra-conserved element locus
            uce-406, sequence.
ACCESSION   KCPA01003680
VERSION     KCPA01003680.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 447)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 447)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="405408tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>447
                     /note="ultra-conserved element locus uce-406"
BASE COUNT          135 a          104 c           78 g          130 t
ORIGIN      
        1 tgtggcctgg aaatacagta agtttttaag aaaaggctcc attattctcc cattaaagcc
       61 tctgtcagtc tctccttcgc tcgctctctc cgaagacaga tcgttccctt aatcattctg
      121 gaaaagaacc ccaagctgat ataatattat aattaattaa ttcactaaaa aggtattaaa
      181 tttcttttcc cccctgtgga tattatctga attcattgac ctttagaaaa atcaccctct
      241 aattgtaacc aggttcaagt gcatttccag cctgtccctt ttacattaat aatatcttcc
      301 aggactccac tatgctgctt aaatattgta taaatttcac tgccccctcg ggagaaaggc
      361 atgaaatgaa aactgggagc tgattaaagc tccagagctg ggagatggac aaaccacagc
      421 agggccctga agggtgagga atcccac
//
LOCUS       KCPA01003681             566 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 405516tic ultra-conserved element locus
            uce-2256, sequence.
ACCESSION   KCPA01003681
VERSION     KCPA01003681.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 566)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 566)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..566
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="405516tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>566
                     /note="ultra-conserved element locus uce-2256"
BASE COUNT          183 a          120 c           97 g          166 t
ORIGIN      
        1 acagagtcac agtaaatgcg ctgacacaca gaaccatgct gttttccaga caacactctg
       61 acatctgctc catcatgtaa aaacccaact tcaattcatt ttaaagcctc acttgaagat
      121 accattttag actctcttgc tgtagatttc actttgccag ctgcttaaca tgcacatcgg
      181 accctccaac actgagccat atagatctgt ctttgtcttt tgtgttaatt attagctgct
      241 gcagagctgt ctctgtgggt gaacgcacac agaaacaaag gcggtaaggt tgtaaaacct
      301 tttatctcta tcagggcaca ttatttgata aggtgctaag ctaatagcaa tgcatgtcaa
      361 attgtgttta gacagatcag tgtgctggga attggaggtt atatttgtct ctgcaaaaca
      421 gcacctgcag aagcaaagag aaattcatac taatattcac tacgtaaacc ataaagcatt
      481 acaaatggct ctaagataac aaacctctaa tcattcatat tctcataaaa taggaaactg
      541 aatttatatg gcctatcatt taaaag
//
LOCUS       KCPA01003682             524 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 405625tic ultra-conserved element locus
            uce-7083, sequence.
ACCESSION   KCPA01003682
VERSION     KCPA01003682.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 524)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 524)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="405625tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>524
                     /note="ultra-conserved element locus uce-7083"
BASE COUNT          117 a          151 c          147 g          109 t
ORIGIN      
        1 tgctgaggac tcagagagag cagctttcct cacagactgc ttttcccagt gtccatctcg
       61 caaggacaca ggtcaaatag gtcccacact gccagcctca gacacccaca gcaggtgtcg
      121 aggaggatga gcagagagcg tctcgggagc gtggagccgt agtacttgcc agtagcaggc
      181 tgcatgcgag tccatttgac tgtgcaaccc ttgtgctgct ttgtcctctg ctgtcgttgt
      241 caccaacgac tttcggaaag cactaatgaa caagtgcaat ttcttttctc tattgttggg
      301 ttttttgtaa agttgctcaa atgctctcag gtatggcggc cctgaacgga ggactcggcg
      361 caacaggcct gacgaacggc acggccggca cgatggacgc gctcacccag gcctactcag
      421 gaatccagca gtacgcggcc gccgcgctgc ccaccctcta cagccagagc ttgctgcagc
      481 agcagagcgc cgcgggcagc cagaaggaag gtaactaatc tgtg
//
LOCUS       KCPA01003683             382 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 405723tic ultra-conserved element locus
            uce-1069, sequence.
ACCESSION   KCPA01003683
VERSION     KCPA01003683.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 382)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 382)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="405723tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>382
                     /note="ultra-conserved element locus uce-1069"
BASE COUNT          124 a           70 c           73 g          115 t
ORIGIN      
        1 ctgcttgggc cgtgcacagt agcttgtgtt gatgtgtaat gaagcaccac tagacagaac
       61 agtcacttgt ggcaggtagc taagaaattt caataaagta aactctcagt attatcaaaa
      121 ttatacattt ggggctgtta gcatggccta gaaaaagatg aggacaggct catctcatta
      181 aatgagaaga aatagtggaa ttagcttgaa tctaattaca agccacacta tctaatgtaa
      241 aaacatgact gttttttcac tcccattcat tttggctagt aattagtttt ggcctctaaa
      301 atgccaccct ttaatcatcc aaacacagat gtgatttgcc gtgcaattta atcttgcttt
      361 aatgaagaac taatggacgc at
//
LOCUS       KCPA01003684             430 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 405829tic ultra-conserved element locus
            uce-7350, sequence.
ACCESSION   KCPA01003684
VERSION     KCPA01003684.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 430)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 430)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="405829tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>430
                     /note="ultra-conserved element locus uce-7350"
BASE COUNT          142 a           83 c           75 g          130 t
ORIGIN      
        1 gccgtaatgt ctggaaacca ccagctgcta agtgtgtctg aaactatggg ggctgactta
       61 tgaacattaa actgaaacct gatattttta aagctttcaa ggcaatccat tttaaaagca
      121 cccaggtcag aacttaatac ataagaaatg ttcatacctg gttcatttat gtccgataat
      181 aaaacaaaat cctctttaaa agtcttcagt acctagtaac agccccatga agaataaggg
      241 ggctggcagg ggaagttgtc agaaaattta atttcctttc attagctagt ctgctccaca
      301 aatcggtgct tgttaagttc aaagcagtcc tgaaagcaac atcagtttta agtcttttta
      361 ctccagtcac atctgttaat gagatttttc caaataacaa ttgtttttaa ctcaagagat
      421 aaatctagca
//
LOCUS       KCPA01003685             545 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 405934tic ultra-conserved element locus
            uce-6294, sequence.
ACCESSION   KCPA01003685
VERSION     KCPA01003685.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 545)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 545)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..545
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="405934tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>545
                     /note="ultra-conserved element locus uce-6294"
BASE COUNT          198 a           92 c           84 g          171 t
ORIGIN      
        1 taacattaaa gaaaacatgt aattatggaa tatataatca aaaacagttg tattttttca
       61 aaaaataatt aaggttttta ataagcaata ttcagctttt gaagcaatga atatataaag
      121 ctttatttgt tgacctcaaa ttactttact acagttatat tgataacatc taggtttctc
      181 aaaaacctgc tggcacaaaa tcttttcagc tttattaatg attcagatgg cagtttctga
      241 agagacaagt tcccacagag aaggagcact tgattaatga cctggaaaca cttttccttt
      301 tcagctgatt aaataaaatt gactagattt ttacattttt ataataaaat gacctgcagg
      361 gctgagatga cacagtgaaa gcagcatgtt cactcttcaa cagattttta ttttgtcact
      421 tgtaaaaatg aaagggctaa ccacccaagc agaaaaatgc actttatcac tgtccactgc
      481 cgacatgctg acaattgctg catacaaata caaaaacacg gaggaaacta ggctgtgttt
      541 acact
//
LOCUS       KCPA01003686             560 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 406040tic ultra-conserved element locus
            uce-3767, sequence.
ACCESSION   KCPA01003686
VERSION     KCPA01003686.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 560)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 560)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..560
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="406040tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>560
                     /note="ultra-conserved element locus uce-3767"
BASE COUNT          169 a          125 c          114 g          152 t
ORIGIN      
        1 aagaattgta tttatggttt caagtatttc agaagcactg gcaaggatag aagtgttagc
       61 attttagaat gctcatttaa tttataaaat gaataggaat gcacaaggtt tttccaaggg
      121 tcacacagaa cacgttccaa attcttgcat catgaggctg tgactgtacc accggcctct
      181 tagattggac agatcatgga tcaaacatca attaatttaa caatttccat ttcattgttt
      241 gcacattact gaaacaagac ctcttcaata tccaccggtt tgctgaagat gttaaagcgt
      301 ttgtctgtgg ccagcctctt ggtgacatcc ctgagaaaca agcgcagctc ccgcagggtg
      361 ttctcctcct ggtcctccat ccgctgcttc tccgcttccg acagctcccg ggcaggacat
      421 ggcagtgcaa gaggaagaac ttccagggca cgaagagcta gggaaaaaaa caagaaatca
      481 gacaatggaa acattaacag tacagtttat gccactccaa atttcatttt taacatgcat
      541 cgtggatcta caacaactgt
//
LOCUS       KCPA01003687             597 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 406149tic ultra-conserved element locus
            uce-1264, sequence.
ACCESSION   KCPA01003687
VERSION     KCPA01003687.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 597)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 597)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..597
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="406149tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>597
                     /note="ultra-conserved element locus uce-1264"
BASE COUNT          186 a          110 c           99 g          202 t
ORIGIN      
        1 gtaggttttg tgtttttcag atttgaactt gagatctata attaagaaaa ctcttggaca
       61 atttttaaac aggctaagtt tccttcacaa acaacctgct gctgctgttt ctgaggttcc
      121 tgttaaaaag tagtaatgtt ctatccacac attaatgatt ccaaaattct ccattatgaa
      181 caatatttat caaaaacagc ccactatcag atgaaagatg tgccttatct tttcttgtca
      241 actaaagcat tattcactga aagtttcttt catatctgtt tcaggggttt cagtgtcatt
      301 ttaaattgca aatcaatcat agatcatgca agccctactt ctgtaggaga gattaacgct
      361 ctggctaaaa ttgtttacaa agccatttgt aaaccttctg ctgatgcaga tgaggcaagt
      421 ttaccagttt aacattgttg atcccagaga aagccttaag caatgacttc agagggcaaa
      481 aaaatttgtt catttatcat tattgtcatg ggctttcgca aatgataaca atttgtcttc
      541 atcctatttt tagacaatga gccacaatag agtccagaaa gccattttgc cagatgg
//
LOCUS       KCPA01003688             785 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 406263tic ultra-conserved element locus
            uce-5459, sequence.
ACCESSION   KCPA01003688
VERSION     KCPA01003688.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 785)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 785)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..785
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="406263tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>785
                     /note="ultra-conserved element locus uce-5459"
BASE COUNT          239 a          136 c          146 g          264 t
ORIGIN      
        1 tggccatctc tgtcaagagc tagtcctggg ttttaatttc ctgaagtgtc tcgtttctcc
       61 aaagggagct ggaaaaaaat cctctttcct cccctcctca cagttgctct ttgagtaagg
      121 ccatacctaa caattattca ggaaaacatt atgttgacat tactgtttag aaaataaaaa
      181 agggttttta aagctagaga gtaacatcgt gaccatatag cactagtgaa tgattaaaaa
      241 tttagatgac tgcctttgaa acaataaaaa gctttcgaag cttcttaatg agcagctatc
      301 agaaataaag catttaaaac ttcagaaagt gcctctgtgg aaatttcatt gtctttgatg
      361 ctgtaaaata actgcagggt ggattcattt caagttcttt ttagcatact ggtcgtttag
      421 aaatattggg agatatcttt cttagcaata tgtggggaaa acaatgtctt ggtcgctttc
      481 atttatctgc aatttgacag gagtgcagtt tattaacttg aaaagagaca gatacattat
      541 ctgaaacaca gagagtatag tgggtattgc ctccttttta taccagtggg agtccatgac
      601 actttgaact tgctcaccat taaacgcctt cctgagttgt tgaagaggcc tttaaaaagg
      661 gagcctgtgc atttatgatg taaattcgtt attttgacag tctttgaaat ctgtcatatt
      721 cacgtccaat ttaatgcacc gcaaattctt ttcttttaaa atacttttct tttaagattt
      781 caaag
//
LOCUS       KCPA01003689             575 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 406372tic ultra-conserved element locus
            uce-2461, sequence.
ACCESSION   KCPA01003689
VERSION     KCPA01003689.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 575)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 575)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="406372tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>575
                     /note="ultra-conserved element locus uce-2461"
BASE COUNT          183 a           84 c          110 g          198 t
ORIGIN      
        1 cccctcagtt cagtgggatc agatggtaat aaattcacat aattacatac ttgttaagga
       61 ggttaaggtt attttgtttg gataacgtga ctataattta ttttgtctgt aaggtttgag
      121 tttaaacaat attaatggtt agttaatggc ctaatgagtc agctacaagc catttaggca
      181 tgcaatgaac ctttgatttt cagtgactcc tctaatgaaa gatctatatg agcgcctgtc
      241 tactgtcaca atagagatag caagagagtc atctaatcga ttgtgatggt aaatcaattg
      301 atctgtaacc ctgttttcat acagtgaaaa agatatggag gaaacatttt actgttctct
      361 tatttccaga tgaatatcta taaataaaag agacagttcc ctatttgaaa atattccctt
      421 tataactgtg attcaaaagc agggagaatc tgattgatgt cctattttat agatgtgtcg
      481 gttacttttg tcatttcagg agatttaaag ttcttagaaa ttaaatatat gatgcagaac
      541 atcagagagg cttgcacttc actgtcatgt gtaag
//
LOCUS       KCPA01003690             839 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 406483tic ultra-conserved element locus
            uce-6355, sequence.
ACCESSION   KCPA01003690
VERSION     KCPA01003690.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 839)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 839)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..839
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="406483tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>839
                     /note="ultra-conserved element locus uce-6355"
BASE COUNT          257 a          154 c          142 g          286 t
ORIGIN      
        1 ttatcttcca ttctgcattt actattttta tctttattaa tagctactgc tcagtggcct
       61 taaagaattt ctccattcaa cagaaacttt tctttccaga gacttatgct aattggtacc
      121 ttgtttgtgg cttcagtgtg atttatgagc tactctgagc cctgaataac aaaatatcag
      181 gctatctcca taactgtcta ttaatttgtt tatctttcta tctgtctacc tatctgcaga
      241 aatttaaaac agtgcaataa ctttcagatc agtgacatta atgcagcatt agattaaaag
      301 aatgttactt tatacaggca taaatgtaat ttagaggcac ttagaggaag ctatatactt
      361 aacatgattc ttggccagtg aagacaggtt gatcccactc attttgggat tgctaatttg
      421 cagttaatta ggaagattga ttctgttctc tgaggcccaa ccctaaatgc atttttccgg
      481 tttccgtggc accatgctag ttatcattgt caaggtgcaa gcataactga atgacacggt
      541 ccttcataaa acacgatact tcgggagttc aggaaagtaa atctagtaac cttcagcaaa
      601 cactggttta cgctgtagac caaaatctgg tgtcatctgc atttaaaaca actttcaagt
      661 cacattcctt tgagaaggtt tattgcaatt aacaaataga gacttgcttt aatgctcaac
      721 taaaataaca tcgtttcata gtttgaagga aataaaatat tgacattttg cttgaaggaa
      781 cttgtatcct taaataaatg cagtgggcat ggcatactta agcttgtacc ttttataga
//
LOCUS       KCPA01003691             765 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 406593tic ultra-conserved element locus
            uce-2376, sequence.
ACCESSION   KCPA01003691
VERSION     KCPA01003691.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 765)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 765)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..765
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="406593tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>765
                     /note="ultra-conserved element locus uce-2376"
BASE COUNT          233 a          150 c          131 g          251 t
ORIGIN      
        1 tgtgtgagaa agtgtaataa gcctgcattg atctatggac cttattcttt ggggaaatat
       61 gagtcacaga tgcatagttt ggagacagtc ttaaaaatat tatctctcaa gtgttgtgtg
      121 aagctttaca gacttcttcc tgcaaatctt ctatgtcact gttagaacca agtccaaaat
      181 atttacatct aaacaactta tggcatctgt caatatctgt ctgctccaaa acatatctaa
      241 gtgcaacatt taaaactgca taaacaggag tgaactagta gcagtctaaa gttgtcatca
      301 ttgacagtta tgatttatct taactctccc tagccatttg gctaaagttt taagtaaaca
      361 ctttcagtct tcctcatgtt ctctttactg ccacctccca ctaataagag atgttgccaa
      421 gaaaagcagc cagacagttc atttacctcc caaacttgcc tgaaagtagc ttgcctggtt
      481 tagacaaggg tcgaaactac tactgcacat tttcaacaga tggaacaatg cttcacaaat
      541 tatttacatt ggagttattt gctttcagga tgtgtgttta acgaatggtt agttgaatga
      601 aatattgcag ctcagacaga gaatgcaagc aattcaagca agccatttat ggtgatagat
      661 gtagctatga tccttaattt tctacaaagc atagcagcat tttgtcctca ttcttcaata
      721 gctccttgaa tctgacaaat gtatggtttt tattttcacc ctctt
//
LOCUS       KCPA01003692             628 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 406700tic ultra-conserved element locus
            uce-4121, sequence.
ACCESSION   KCPA01003692
VERSION     KCPA01003692.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 628)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 628)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="406700tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>628
                     /note="ultra-conserved element locus uce-4121"
BASE COUNT          153 a          136 c          137 g          202 t
ORIGIN      
        1 tacatgagca tgccgctctg aacccttata caatgagaat aatgccttct tttacactct
       61 ttgtgcttat tgtgggcaac ccaagaagct ccatctgcaa accctgtcta gaacctgctt
      121 gtgtggggtt gggggacaga caaagcgttt tgcgctgcat gtcttgctgt tggagtaatt
      181 acattcatgt tgtataaggg gatctacctg tgcaatttaa cttggttctt ttactatttt
      241 ctgttcttaa actgcaccca agatgccttt gcagcttctc ctggggaagc ccctgcagca
      301 gctgaagggg cagcagcacc agctacccca acccctgtag cagcagctct tgatgcatgt
      361 tcaggaaatg gtgggtctta tgtcattaga tagtctctaa actacatggc agtgtggaaa
      421 atttcatact gtttgcaatt aaaaacaaac cttagactga agagcatgct taacaaaact
      481 gcctgtttcc gagtactatg gctttgtgtt tgtttgggag tgctaatgaa tgtcagtgct
      541 gagttgtaac ctttgtcata ttttttggcc tcgtcaaaag cctttgaaag ttctcccttc
      601 tagtaactag tttcagacag tctttatt
//
LOCUS       KCPA01003693             641 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 406809tic ultra-conserved element locus
            uce-3054, sequence.
ACCESSION   KCPA01003693
VERSION     KCPA01003693.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 641)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 641)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..641
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="406809tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>641
                     /note="ultra-conserved element locus uce-3054"
BASE COUNT          194 a          133 c          122 g          192 t
ORIGIN      
        1 cacaatacaa aaccccgcat atatatctga tgtattttat acatattcat cctcataact
       61 tgacagatgg gaggaatctt gcagtcattt ctgaaagcag acaaaaggcc gttggttctg
      121 ctccacatga tgatttgtga agacagaata tcacccgctt ccgttgatga ttatatagtt
      181 ctatccatct gtctgccact ggaggttgtg agagtgagat acagctcaca ccgtcttcat
      241 aaacaaaagt agactgtgct gtcagtagtc agacacgcca actaattgga gctgtcgaca
      301 gacacaatat tctgtgtcaa cagctctggt aacagtttga aacagcaatg atatgttggg
      361 tgatggtgag gatgacacat atgtctctaa tagcatgcta gaaatctgac ataactagaa
      421 aagaattact aaaatgtaat tccctgcctc tagttctgct gttcagactt cccagtcagc
      481 acagagagga aagagatgtg ttcatgttct tgtgatcgta cttgtacaca tcttcttctg
      541 tatcacttca tatgctgaca gcttaatttg atgctcataa tgcctaacac taagctttct
      601 gctgaatttc aaggaattca tcaaaattcc tacgcaaatt t
//
LOCUS       KCPA01003694             702 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 406920tic ultra-conserved element locus
            uce-4870, sequence.
ACCESSION   KCPA01003694
VERSION     KCPA01003694.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 702)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 702)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="406920tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>702
                     /note="ultra-conserved element locus uce-4870"
BASE COUNT          210 a          128 c          136 g          228 t
ORIGIN      
        1 aagtatatct gcagcagact actgagacct ttctaatttc tttcaaaatg tgtttcaaac
       61 ttggtgtctg ccataatcaa aaggataaat tttgccgaca ttatgaacat atccatttga
      121 gaagtcaaaa caagtatgat ttagatctgg cttttgtcat agataaatag ttctttttgt
      181 agtgagcctg gagtacttaa agcaacccag caaagtccaa tgaagtgcca actcaagcca
      241 ggaacattat tatttattgt cagttaggac cttcatcact tatggatgtc actggaaata
      301 ttactggtga ttgatactga tggcaatgat gattactctt gcaataagct taattaaaat
      361 aatgaagtac tcttgcacag aacttggttg ttgcccaggc aggataatgt ataagcagca
      421 caaggaagtc atcagctcag agtgcttcat atttcaagtg tgacattgct agggaagcaa
      481 aaaggcattg tgtgccattt ctccactatt tctgttccac ctcctatgtg tatgcatata
      541 caaataattg ctggaataga cactgcagag attgcctttc agatattaat cctgactctc
      601 tcccttaatg aagtgtacac tggtcatagt ggtgggattg ctgtttttat aacatgctgc
      661 aagtctctga gaagtttttc cattattctt cagggagctc tt
//
LOCUS       KCPA01003695             444 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 407027tic ultra-conserved element locus
            uce-5205, sequence.
ACCESSION   KCPA01003695
VERSION     KCPA01003695.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 444)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 444)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="407027tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>444
                     /note="ultra-conserved element locus uce-5205"
BASE COUNT          103 a          120 c           98 g          123 t
ORIGIN      
        1 catttctctt tccactcttt ccttggcata atctttctta tcagcagctg ttcatgatgc
       61 tgaagcttat atctgtactt tttctttcat gcttgcaggc atggatctct tctccaattg
      121 cacagaggaa tgtaaagcac tgggccactc agatcggtgc tggatgcctt cctttgttcc
      181 atccgatgga cgccaagctg cagattaccg cagcaatctg cacgtgcctg gcatggactc
      241 cgttccagac actgaagtgt ttgaaacacc agaagcccag cccggggcag aaaggtcctt
      301 ctccaccttc ggcaaagaga aggccctgca caacagtctg gaaaggaagg agttcgatgg
      361 actgctgtct aatacacgag cgccttacaa accaccatat ttgagtaagt accgttccat
      421 tccctttgcg ggattttcgt gcta
//
LOCUS       KCPA01003696             281 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 407127tic ultra-conserved element locus
            uce-7917, sequence.
ACCESSION   KCPA01003696
VERSION     KCPA01003696.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 281)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 281)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="407127tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>281
                     /note="ultra-conserved element locus uce-7917"
BASE COUNT           55 a           64 c           88 g           74 t
ORIGIN      
        1 gggggcggcg gcgggcgcgg ccgcggagag ctgccagtca gccgctgatt tattattcat
       61 ttgtgttata ggtggggtgt gcagacagtt actgtaataa ttacccggac tggagcgttt
      121 ccttggcaac cctccattca tgctgttgcg gagagtacgc ctgtaaagca tgacattgct
      181 gtattcgggg gtttgttgcc ctcccgctgc tccgggtttg aggttagtta cagcatcaca
      241 aggtgctctc gagcataaaa agctcaggct gggattaaag c
//
LOCUS       KCPA01003697             381 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 407236tic ultra-conserved element locus
            uce-6786, sequence.
ACCESSION   KCPA01003697
VERSION     KCPA01003697.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 381)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 381)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="407236tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>381
                     /note="ultra-conserved element locus uce-6786"
BASE COUNT          106 a           84 c           83 g          108 t
ORIGIN      
        1 gcacataaga acaaaaggaa gagaggttga tcctaagggt ttccttccca ccaagctgta
       61 agaaaatcac ctgtgatgtg aagtcatgct gttgtagctg tctcccttct ctcaagtccc
      121 aggatctgac agtgttatcc aaacctcctg tccagagctt ggtaccatca ttagaaatgt
      181 caatacagct ggctccatct gtgtggccct ggaattgcct gataaaacaa accagattga
      241 ataatgattt cctgccagag ctcaaggtaa acactgttgt ggtgttagtt ttggactctc
      301 atctgttctg tgtctgacga tgagcaagaa tccaggtgct agaattgcat tatggctagc
      361 tgaataaagt ctttcctaac a
//
LOCUS       KCPA01003698             626 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 407344tic ultra-conserved element locus
            uce-6454, sequence.
ACCESSION   KCPA01003698
VERSION     KCPA01003698.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 626)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 626)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..626
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="407344tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>626
                     /note="ultra-conserved element locus uce-6454"
BASE COUNT          155 a          151 c          141 g          179 t
ORIGIN      
        1 tcttttctta cagggagaaa aggtaagttc tccttagtat ttggtttgca gcctatggct
       61 agttcttatc ccctcccctc ccgtttgatt ttctgttctg ataattgatc aactaacata
      121 cctaaaccag gaacatcaga tctacatgcc attgttaaaa ggccttgcaa tggaagactc
      181 acaaagtaca ttggtgcaac agagtcacta agggtttcct ccctcttctt tctcttgtct
      241 cacaggtctg cccagccgct tgcccctgcg gtgagtaacg ccagcagcct ctgctcgctt
      301 tgagacattt agagtctgaa tcgttctttt aatttaaggt accccagagt tcatggcccc
      361 cgagatgtat gaggagaaat atgatgagtc cgttgatgta tatgcttttg ggatgtgtat
      421 gctagagatg gccacgtctg agtatcctta ttccgagtgc caaaatgccg cgcagatcta
      481 ccgtcgagtg accagtgtaa gcctcactac cgagtctaca gctcctgctg ttagcagcaa
      541 aggagcacca ctgcagctgg caagagttac ggggcggttg aactcactaa acatctgtca
      601 gacacttgta aagtatgtga atggaa
//
LOCUS       KCPA01003699             518 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 407451tic ultra-conserved element locus
            uce-4862, sequence.
ACCESSION   KCPA01003699
VERSION     KCPA01003699.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 518)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 518)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="407451tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>518
                     /note="ultra-conserved element locus uce-4862"
BASE COUNT          166 a           91 c           91 g          170 t
ORIGIN      
        1 aaaaaattga aaaatccaaa gttcatgtat ttccccaatt ttttttaaaa aaatctctac
       61 agacagagag aatttgcaat gtatctgcat agatcagatc tctcgctttt ccatgcacct
      121 ccttaaaaac ctgtaggaac aaaattttcc ctctgcacaa aagctgctcc ctggatcaga
      181 ttttgtactt gctgggtatt tctttggctg atgtcgtagg tcccttggta atatagaagt
      241 tttgaaaatt aagcatcagc actgagaact gggaggacaa tagatagagg agcttcatcc
      301 caggagacaa ggaataaata ttgtatcttc gcctaataag gaactgtagg ttctttcaac
      361 atttttatac attttttcct ccactcttta gaatgtttac ccaggctaat atgggaacta
      421 atctgatcga agggggtatt ttgtgtgcat tttattggga agacataaag ctaatatata
      481 taatatatat tattaaacca tccttttcaa taggtaag
//
LOCUS       KCPA01003700             787 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 407562tic ultra-conserved element locus
            uce-11, sequence.
ACCESSION   KCPA01003700
VERSION     KCPA01003700.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 787)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 787)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..787
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="407562tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>787
                     /note="ultra-conserved element locus uce-11"
BASE COUNT          221 a          164 c          144 g          258 t
ORIGIN      
        1 aataaactat acatgagaat tcatttgctc ccttctgtgg acacagatac acttttcttt
       61 ggcattacat cacttctctg ccaaactgta ttttgaaatt taatgagggg ctaaaggatg
      121 ttattaattg cttttcactt atccactagg ctgcaatttc atcttttaca agaagatatt
      181 caaaaggttg tagctaccct gactcacagg gaaatttaac atgtgcctcg agtagggaca
      241 aataaacaac tgaattcact aaacatcact ccacgcaact ttctcttgcc actagttagg
      301 ccttaatata cttagaaggt tgctcttcta atttgaactg tgtgagactt tggctggagg
      361 ctacttctgt gtcccagtga taaaagaaga cataaaacaa cccagtgcct gatcatgctc
      421 cctggctgtc agtgaatcat gtttaatagc atctccattg cagtcttggc caatttgctt
      481 gcaatggcat ccttttccat gggcttgctg ctcagcaggc cctgaagcaa tctatgaata
      541 acttcccaac agatgctgtt tatgaattga agcaaatggc ttccctgttt ctcttttttc
      601 tcacttcaat aattttcagt tacattacga tgaatattta tagtcctata gcagtgcata
      661 aaaatgggaa caagcagacc tgtgcattgt ttcatacgtg agtgctgttc taatggcttt
      721 tgcctcgatg gttttaatgt tctgctgatg gactgaaaag agaatgcaaa ttgtacatca
      781 gtcactt
//
LOCUS       KCPA01003701             720 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 407673tic ultra-conserved element locus
            uce-2357, sequence.
ACCESSION   KCPA01003701
VERSION     KCPA01003701.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 720)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 720)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..720
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="407673tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>720
                     /note="ultra-conserved element locus uce-2357"
BASE COUNT          213 a          151 c          146 g          210 t
ORIGIN      
        1 tagtcagtga aaagtatttt catcccaaat gtgccgtagt tcaggaggca tctcccttcc
       61 accctgtccc attccagcta ccaagcactt tcctttcatg agtataatgg ttatcaactt
      121 atttttcagc taaggagggg gaatttaaac tgcctgcctg acaatgcttt caaatggtga
      181 tgaaatgtct tcttcgtatc tgaagagaac atgattatta gcactgaatc tgacagacac
      241 gatttctgaa tatttttgtg gcattaattt aaatcaatgt aatgtttgaa aacatttcag
      301 cccctcaaac agctgatgca gcttagattc aattataaca aattgcaaca cactgtcaag
      361 tctttttacc aagtcattag tcagggattt tgaatgcacg gcctctgaac ggagttcgac
      421 tggctgacag ctctaattgt tgggaaccgc taaaggattg ctaatgaact gggggatctg
      481 ttgggcctgt agctttcttc aaggatgaaa tttttgaaaa ctttcacaag atcaaagcgg
      541 cataacatgg accatttgct aaattgtcag cagtggagtg aagcagtctg agtcccagct
      601 ttaaagctca agcttcagta gaaaacacca tgtgcctcct gcccctgagc ttttttcatg
      661 tgtcagtaaa accatagtga gaaacaatga cttgaagaaa gaaccccaga gccaccatgg
//
LOCUS       KCPA01003702             511 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 407856tic ultra-conserved element locus
            uce-4888, sequence.
ACCESSION   KCPA01003702
VERSION     KCPA01003702.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 511)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 511)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="407856tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>511
                     /note="ultra-conserved element locus uce-4888"
BASE COUNT          147 a           96 c           94 g          174 t
ORIGIN      
        1 tcctattaac agcactatga ataataatca gtttactttc tggcttgtat ctaaatatac
       61 tttctatatg atttcatctt ttattcagct gtttaaaagc agaacatcta attacagttc
      121 atattagtct acattaattt ccacagagca tgtgtgatgg ctgattttct aaaaacagac
      181 agaatttttt agcatatgga aaaatcatgt tattattaat acattcccac atgactctac
      241 atttcaattc ccttaattat ttagtcattg ctgattatgt cttttcacaa ttcattatcc
      301 catttcctgc aacgcgggca ttttattcat taagtgtcaa aacgaagggc ctgacctcca
      361 ggaagataat caggaaataa gtggcagaca taaaaggtct gggtttccct taagtgctcc
      421 cttatttcgg taactgtgcc gtgttttcag taagcggtgg caggagcgca gcgttgttgg
      481 taattgcagg agggcgcggg aatgccaggc t
//
LOCUS       KCPA01003703             370 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 407961tic ultra-conserved element locus
            uce-5840, sequence.
ACCESSION   KCPA01003703
VERSION     KCPA01003703.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 370)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 370)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="407961tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>370
                     /note="ultra-conserved element locus uce-5840"
BASE COUNT          117 a           75 c           74 g          104 t
ORIGIN      
        1 acctgcactt catgtccttc agcaggtact gcagtcttat gtaaatcagc aagattgatg
       61 ctgttgtatt ggtcagcatg taaaataacc tgtcatcagt acagaacgtg atgtgcagaa
      121 tatcagtgta acttgaaatt catagcattt taacacctgt ttccatagct acagtgtaat
      181 ctagacatct gagaagccag cctgcctttg ccagccctgt catttcaagg gaaataaatt
      241 aaggaagctg atcacaagcc tggattatgc ggcttcttta aagtatagca accagacctg
      301 aaaactaacc aggaatgaac atcattggga cagaatggat taacctttgt aggagaactt
      361 gaatctctta
//
LOCUS       KCPA01003704             563 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 408065tic ultra-conserved element locus
            uce-4704, sequence.
ACCESSION   KCPA01003704
VERSION     KCPA01003704.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 563)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 563)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="408065tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>563
                     /note="ultra-conserved element locus uce-4704"
BASE COUNT          157 a          119 c          113 g          174 t
ORIGIN      
        1 tccagtaata attcatattt catggggact tggttttcat gaaatcatct cgttgtcatc
       61 tttcatacat aatacaatat cagtattaaa attctcaatg cagcactgaa cttggtcata
      121 ctgaaatggg gctgacaaac ctcatgtctg atgatgaagg tgaaactggt tttcagtatc
      181 tgtactgttc acttgattga ttccatctta ggcttaacgt ttcctgcatg gcctgccact
      241 gtcatgcaaa catgacctga taacacattg tcaggagcac ttcagagagc ttacagcaat
      301 ctaaaaggag cgtgaagttc catctgaaat gtgcatattt gataaccgtc tttcattttc
      361 agaaagttaa tcttctgtgc tccactgaat cttgaaaatg atctggctca aatgcatcag
      421 gtggcccaat atcactgagc ccctgggaac agacaggttt ccttttccat ccctggacag
      481 cagcatgaat gggagtatgt tgtgctggtt ggtccctttc aaggagacat gctttcagga
      541 ccaggacaaa aatccttttg aat
//
LOCUS       KCPA01003705             638 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 408175tic ultra-conserved element locus
            uce-2762, sequence.
ACCESSION   KCPA01003705
VERSION     KCPA01003705.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 638)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 638)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..638
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="408175tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>638
                     /note="ultra-conserved element locus uce-2762"
BASE COUNT          207 a          116 c          114 g          201 t
ORIGIN      
        1 gggtcctgct ggcctctctg tttaaaggaa cattattcct ttttaaatac aaagcccaca
       61 gtttcttcag taggaaaagg tcttgccacc caatttcaga tgcaaagtta ctgcaagcac
      121 tatagcagga gccctgctca gggtttttag tgtatagttt atggatttaa tttctttttg
      181 gaaataaaag ataacttcca aagaaatgac atgagtgtgt aatctccttt tgcagtgatt
      241 tttctttgat tgatgtgcca ttaatacttt aattggtaac aggtgcagct gattgttggt
      301 tcctaagctg aaaaatctga aattgaacat aaggctctga taaattaata aactcctctt
      361 ctctaaacag ttgttgctat gaaggaacta actttccatg aagcgccgct ccatcaagca
      421 cactgaatac tttatgttaa aaagcaaaat gttacttaat gataaattaa aattacacta
      481 acaggcaaag ataaaacata ataatgacac ccccttaagg aaaagaaatc actggaaagc
      541 actgagaaag ttatcttgtg aaatgtgttg tttctgttgg cacatcaggg tggccatttg
      601 gattccctat cacattatta aagacatctc catccatg
//
LOCUS       KCPA01003706             560 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 408284tic ultra-conserved element locus
            uce-7557, sequence.
ACCESSION   KCPA01003706
VERSION     KCPA01003706.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 560)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 560)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..560
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="408284tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>560
                     /note="ultra-conserved element locus uce-7557"
BASE COUNT          181 a           96 c           80 g          203 t
ORIGIN      
        1 gtttctactt tattgtttcc ttttacgtta atctgtttat ttatatgagg tgttttcttc
       61 ttaatcatat tatattgaaa tgccaactag tactagggag ctttccatat tcttttgaaa
      121 tttagaaata gcatggctct tacatgatac tttcataatg ttgccagtcc tctgataagt
      181 tgttcgcatc agatatttag ccccaatacc tactgcttga gaatctacac tgattctctt
      241 cacgttttgc ctctgcattt caagatttat gaatattaag ttgtgcttgc cccaaagcaa
      301 aagtatactc actaagatat ttgctgagat caggagtctc ttttttaaaa caaaggcatt
      361 aataaggaag cactataaaa tgtatgacat tgaaaaaata aggaaaattc agtattttta
      421 ataaagtgag aatcctctag ttcaaagcac cctatctcag ctaccctaaa taatgcaaaa
      481 gagtaacatt ttatggaatt atttctgcta agtgtgaata taccctgatt tctaaaacta
      541 tgaccattat tttcaaaaaa
//
LOCUS       KCPA01003707             711 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 408391tic ultra-conserved element locus
            uce-7595, sequence.
ACCESSION   KCPA01003707
VERSION     KCPA01003707.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 711)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 711)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..711
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="408391tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>711
                     /note="ultra-conserved element locus uce-7595"
BASE COUNT          222 a          151 c          134 g          204 t
ORIGIN      
        1 ctaataatgc ccctgaaaga actcaagctt catagtgccc atctttagat acgaaaacct
       61 tctgggtcca cccttttttg agtgttgtag tccacaagta gctcaggaaa caggcattgt
      121 tgatccaatt agataatagg agtactttgg ttctcattat tctgatgaga gggtacacat
      181 ttgctctttg agcttcttga tggtaaacgg tgctaatgag gcctgatgga ttccctgctc
      241 ctaacaagcc tctcagcagt gcaagtgatt acaatggaga tagatttgat gggatgcgct
      301 cccttttgta gtgtctcagc tgctgacact ctccgacata atcaggtcac agagccggtc
      361 acagccatca gcaaaagcca tagctctatt cctcattatt aaagtgcatt attcagttcc
      421 aggccttcac aatactgcca aaggccgtta agcatcagtt ctcaaataca agagttaata
      481 aaatcatcag ctaaagaact agtaaattaa acaaatggaa ataaagtgct ccctttcaaa
      541 ttcattgaag gatcacaatt aaataagcag ggaatttctc atcaccacac acggtactaa
      601 taagtcatgt gcaataacaa aaaaaataac attgtcctca ttgtggactg gcttggaaag
      661 tgctaaagta tcttttatgg taaaggaaac ttctttcttc ccaacttgta g
//
LOCUS       KCPA01003708             388 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 408494tic ultra-conserved element locus
            uce-2464, sequence.
ACCESSION   KCPA01003708
VERSION     KCPA01003708.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 388)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 388)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="408494tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>388
                     /note="ultra-conserved element locus uce-2464"
BASE COUNT          131 a           73 c           72 g          112 t
ORIGIN      
        1 aatgaaggaa aaggaagggg gtagaaaaga aaatcccaaa gatcctcgga taataagcac
       61 cattaaggtt agtctgtctc atgattgttt cttattaaaa agagactgta ctttatctgt
      121 gcaggatatg ctgtttggat gagggaatta gcagagtgac tgcctccata tcatctaatt
      181 agcaaaaatg ttgataagca gatacaatca catatgatta ggatcctttt aaaaagccac
      241 tccattaatt aaatagacag aaaggctgcc tccagccctc gcgtgccact gattagaata
      301 caaatattta cactaatctc acctccatca gccatgggac acttttgagt atttttagtg
      361 acatcagatt actattgatt ttcatccc
//
LOCUS       KCPA01003709             338 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 408591tic ultra-conserved element locus
            uce-3241, sequence.
ACCESSION   KCPA01003709
VERSION     KCPA01003709.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 338)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 338)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="408591tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>338
                     /note="ultra-conserved element locus uce-3241"
BASE COUNT          119 a           66 c           46 g          107 t
ORIGIN      
        1 cgtgaatgac tacaattatt ctacagcaag aaaaggcccc gaactactta aagatttaac
       61 ctttacttcc acctaactga tgccataaca atagtgctta gtatgtctca aggacaaatg
      121 atcactctaa gctgtataca atccaagacg tgttatcgct cccgcaaact gttgtcctaa
      181 aaattatatt cattgttttt caaaatgtta tcaacttaat aaataaatac ctttcagggt
      241 gaaaaatgtg gcagtacttt attttgtttg taagggcatt ctttatcaac agtattgata
      301 aaagcaaaac aaaaccaaaa attacctgtt tctactct
//
LOCUS       KCPA01003710             532 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 408700tic ultra-conserved element locus
            uce-5987, sequence.
ACCESSION   KCPA01003710
VERSION     KCPA01003710.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 532)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 532)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="408700tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>532
                     /note="ultra-conserved element locus uce-5987"
BASE COUNT          170 a           81 c          101 g          180 t
ORIGIN      
        1 tgcatttcat cactgaaatc acccaggcta aagaggttaa tatcaattat aaactcacaa
       61 ctcattatat acttctcaaa ctagtacaga tacaacatga tttaagatag gagactgtgg
      121 ctaaaggaat tagttgtctc ggcatgaaac acggtttatt taatcaatgt tgtttctact
      181 agaaaagtgg attagttttt ctttaagaca gagttagaag ttttgcagct aatttatttt
      241 aataagcatt cagtcactga ctgctgcaga aaaaggctaa actgtaatga agagccagga
      301 aagaaagcat gacttaatta tttttctggg gtggataatg aataaattag ctacgctgta
      361 ggcttgctgt ttctatagaa tttattactt ttgctttaag aaccatatca tgacaaagtc
      421 aatttttctc ctgactgcaa actgattgat ggggtaatgt ctggttgtga aagacttcct
      481 cttcatcatt gtgttgccaa tgttggtatc acaaagtgag tttgaagttt tc
//
LOCUS       KCPA01003711             475 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 408804tic ultra-conserved element locus
            uce-6060, sequence.
ACCESSION   KCPA01003711
VERSION     KCPA01003711.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 475)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 475)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="408804tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>475
                     /note="ultra-conserved element locus uce-6060"
BASE COUNT          138 a          102 c           77 g          158 t
ORIGIN      
        1 ctctgaaggt actgtatctt cattataaaa ttcagataac aattccagaa tctcagactg
       61 aaatagaaat actcccaagt gaagtactct cctgtgcaaa tatagttctt tccagtgcaa
      121 cctctacttt gctaaatctc ctcagtgatc catcttcctc atcatgctga cttctctcct
      181 ctgtctgttc agcagtggga gacatttagc gaacgctctt caagctcaca aactctgacc
      241 caatttgatt ctaacattgc accagctgat cctgtaagtc aatcacttag cttgcttgtt
      301 tgaaattaat tttattaaca ctgaatttcc agtgtttagc tattttgcat gattcatgga
      361 ctgcggaatg gtggcaaatt attttcagga attttctaga ttgcaaagaa tgattttgac
      421 ctaatacaac actctgtcat acgcaaagaa tttaaatgta agttgatgca tgggc
//
LOCUS       KCPA01003712             634 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 408913tic ultra-conserved element locus
            uce-1345, sequence.
ACCESSION   KCPA01003712
VERSION     KCPA01003712.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 634)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 634)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="408913tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>634
                     /note="ultra-conserved element locus uce-1345"
BASE COUNT          214 a          110 c           91 g          219 t
ORIGIN      
        1 tataatttct aaaaaagcac aaatccatgt agctgtttat aaaactctta tttaatgaaa
       61 atctttatcc cctgaactag aatccaatat aatttgccat taatttattg aatctgattt
      121 tggacaatgc ttctgtagtg tagatgcacg tcccggtatc ttatttttat gtataaagaa
      181 agcaaacaat gaaatctgaa aaacagttga gattatgctt gcataaactc taatttgcac
      241 agttcacagc tactccttgt gcagtaattg ctttatgcgg ctgtaatcga taacctgtga
      301 agacagcaca tcatctaaac cccattccaa ataatatttc tgtgtagtgt tagctgtgaa
      361 tttaccttgt acagctctat ctctataaat ataattccat gtattaatag tcacagaaag
      421 gctgtaagtg agcaactatt tttatgaaac gcaccactat ggataaatta acttttacag
      481 aaatcttgtt tactgtatga tattctaaac cactgtcaaa taaaatatat atccaaaaat
      541 ctttctcaac tgtatatcgt ttgtgttaat tttgagtaaa aggcttcagt gttaccctaa
      601 gaaacaatag tgcatatgag tgctactgcc ttat
//
LOCUS       KCPA01003713             506 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 409025tic ultra-conserved element locus
            uce-4071, sequence.
ACCESSION   KCPA01003713
VERSION     KCPA01003713.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 506)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 506)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="409025tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>506
                     /note="ultra-conserved element locus uce-4071"
BASE COUNT          125 a          112 c          101 g          168 t
ORIGIN      
        1 tcccgtccct gtctcctaag ccacgttttc tcctggagtt cttttgccag gccaaagcag
       61 aggtcacatc aacacgacct ctttgctggt acaggaggct gctaaataat tcacgtggcc
      121 ggggtccaca tttgtttttt ccactcttct aatcaagatg ctcatttaat tctattccag
      181 cacctgttca gcaattaaca ccctacaatt tgcatcttac cctgacattt gctatctttc
      241 caattagttt ttatatcagt ataattaggt agggttatta cagtgcatca agcagggtcg
      301 aggatattcc caagccttta agctctttcc cagatttgtt tagggaagcc actaagggta
      361 aatggttgat taggatcact gtttttcttc ttcattcaga tcaggaaact gtttccccat
      421 gtggcccatg aaagatcagg gaaatatgtc agtctgtaag aactaatatt atgtagttcg
      481 tgactttttg ggtgagttta cagggg
//
LOCUS       KCPA01003714             731 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 409136tic ultra-conserved element locus
            uce-3873, sequence.
ACCESSION   KCPA01003714
VERSION     KCPA01003714.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 731)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 731)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..731
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="409136tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>731
                     /note="ultra-conserved element locus uce-3873"
BASE COUNT          236 a          121 c          143 g          231 t
ORIGIN      
        1 tatggagcac gtcaacagag acggcttttg ggtgaataca cattttttga tataacagga
       61 caagaacttt tataatcatt agtagccatg tttaccactt gcttgctttc caatctgcat
      121 ggtattataa tttgaaaaga ttatgttacc agggtaatga acaataaaaa atttgcaatt
      181 catcctaata agcttgaatg gtaacccaca tgccttggac atttctagcc aggcataatt
      241 tatccacatc tttggctgtg aaacagtgtg gatcttctta actgagtccc tgacagatgg
      301 tttaagcttt ttcaggacta catttccaat cactttgccc atattgcaaa attggccttg
      361 aaaaagggta aagagctgtt atgctgcatt aacatctctt ctgaattgct tgctgtgaag
      421 gacatgaaaa agaaggaaat cagaaaagca gtgttttaaa aatacacgtt gcaaatgttg
      481 gataggatga tgatcttaat tcatgtccct cacctcaatt agaatgtgaa tgtggtgata
      541 atgaaaacaa atgattcaga tggcattcat ggtataagaa gtgttaaaag aactgtaatt
      601 agaaagactt atagtcttaa accctgctga tggatagcac aattgactgc tattagatga
      661 actgggattt ctgtgttttt gctactctga gtggaaaggc tcaaatatct gcattcattt
      721 ctgcatgaaa c
//
LOCUS       KCPA01003715             596 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 409243tic ultra-conserved element locus
            uce-6652, sequence.
ACCESSION   KCPA01003715
VERSION     KCPA01003715.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 596)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 596)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..596
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="409243tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>596
                     /note="ultra-conserved element locus uce-6652"
BASE COUNT          193 a           95 c          127 g          181 t
ORIGIN      
        1 ggggtacaga atctctcttt cggatggttt aattacccca acaggatgcc aggccagacg
       61 agatggaggt tcactgtact gtatacattt ctgataaatg ggaaaagaat agatgacctg
      121 gcagaaggct cagacaataa catgtgattt acaggacatg aatgcagcta ctatgagatt
      181 tatctgacag ccctctctga tagtggactg ttgagtatcc gatggaatga tttctagtct
      241 ggaaagtctg ctactgagta gccatacaca ttatttattt attagatgtt ttgggttgaa
      301 accattttta aatgatgcac ttcacaatgc tcagccataa atttagtttt aaaccctaga
      361 agggaggtag tgttattgga atgtgtgtca ggctgaatta ggatgagcaa cacaacgctt
      421 ttataaagtg gccttgaatg caacgtcgat tccttcaaaa atgatattaa tgtcaaataa
      481 gcaggaacac tttgcagtaa tattaaatga aggattcttt agttttgata gatttataga
      541 aatgtaagac acacacattt caaaatgtag cgtgtctatc aaaaaacaac tggttt
//
LOCUS       KCPA01003716             732 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 409355tic ultra-conserved element locus
            uce-4531, sequence.
ACCESSION   KCPA01003716
VERSION     KCPA01003716.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 732)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 732)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="409355tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>732
                     /note="ultra-conserved element locus uce-4531"
BASE COUNT          192 a          158 c          177 g          205 t
ORIGIN      
        1 cggcggccgg gcgcgccttg cctgcagccg gagccattca tcccccgccc ctttgttcgc
       61 cctgagagta acgctgtgaa ttaaaagaaa tgacaatatt tcgtatctgc tcgcccggcc
      121 aggagaaggg cccttgagcc tggcaaaaat caggcggatc attcatcgtg ccaccccgca
      181 cctgtgggct tggcattgaa aaccccgcgg acctcttcct attcaaccta attattcccc
      241 taaggcgcac aatggttgaa atggagcagg ttggagtctg tttattggtc gtaaatgttt
      301 ttctgaagat cttctgaatc tcattgttag ctcgttgttt gaggctgccc tctttctttc
      361 agacgagagt agccttggac ttttcaattt tcaatcgtaa catctgctta atcgtacgga
      421 tcaaaatatg gagacacaaa acatatgtaa tggttgattt gttaaatcct ggtaatgagt
      481 tattaacaag ggaaaacaat agggcaggat ggtgagagcc ttatggtaac agagtcactt
      541 tatgcaacgc ctgacgtttc ccttcttgat aaatggaact aaggtctgag cgccaggtga
      601 tagcaagaaa atcaatgtct ttaggggccg gcaccgagac tttttttcta tgtgaaaaat
      661 taggagacat aaaatttaat tggctgatca ggggaaagca gtggtcttaa gtttaattgc
      721 cagtaggctt ag
//
LOCUS       KCPA01003717             588 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 409466tic ultra-conserved element locus
            uce-4353, sequence.
ACCESSION   KCPA01003717
VERSION     KCPA01003717.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 588)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 588)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..588
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="409466tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>588
                     /note="ultra-conserved element locus uce-4353"
BASE COUNT          182 a          142 c          112 g          152 t
ORIGIN      
        1 caagattggc tgtacaacca aatgactgca aactgccata tcttgcagtt tatgtaaata
       61 ccgggctgtt gaggctccta aattaaccac ctatgctgca aagaactgtc ttctaaaatg
      121 ttctgaccta caattttgat taagacatag taagtttcat acaacccagg ggaacatgca
      181 attataatac tcactagatg agaaccgtcc ttaacttctt gtacttgctg cacctgcggt
      241 tcagccacaa ctttagtgtc ctgatcagaa gtcatgagct gtctgctttt tggctgctca
      301 gagagaactt tactggtcac ctttgtaagc tgcagaaata agaagacaaa agattctaag
      361 tggttgttga aagtcccaag aacccacagc cactccaccc tgattcagac caaaggtcca
      421 aagaacttcc acacaatacg gttgggatta tgcgtccaga gaaaacataa aaagaacctc
      481 gcagatacac tcagctccca ctcactggct gccttggaat tatagatgaa cacttgccac
      541 agcaccgggc agggaaattc cattgggaaa atctctcttg attctcac
//
LOCUS       KCPA01003718             669 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 409575tic ultra-conserved element locus
            uce-6882, sequence.
ACCESSION   KCPA01003718
VERSION     KCPA01003718.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 669)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 669)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..669
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="409575tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>669
                     /note="ultra-conserved element locus uce-6882"
BASE COUNT          202 a          108 c          153 g          206 t
ORIGIN      
        1 ttagtaatgg gtctgttaat tttccttgta cttcttctct gcaacctctg taaaagaatg
       61 ggcagtttgt actaagttgg tgcagggtat ccagacagaa ctgaaaggac agattctaat
      121 gtcagcaaaa ccaatttgaa agaagtattg attccatgtt gtattttata tccgaagcag
      181 ccaatggcaa atgttgtcaa aatggaatca gatgtttgta acttaatact taagaaaaat
      241 gatgagtgca tgtttttgac tttaagtatt ctctatgctg cctggcttaa gacataaact
      301 gatgtaaaaa taaatgactg cctgcataat ttatgtaatg tcttgctccc tgatcctgtt
      361 tgtattgatt tttctaaaag gcttttgtgg ccacaggaac caatctgtct ctccagtttt
      421 ttccggccag ctggcagggg gagcagcggc agacaccgac ccgggaatat gtcgactttg
      481 aaagagaagg aggcaaggta aggaggaaat tgttgaaact tggtatggac cacgaatgat
      541 gtgagatttc tagtatttca catctccgtg agtacaagtg aaaacaagat aaaactttag
      601 gcaaatggaa gaattgggaa ctggtggctt tgtattttga agaacagaaa tttctactgt
      661 cgtgctatg
//
LOCUS       KCPA01003719            1002 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 409688tic ultra-conserved element locus
            uce-1964, sequence.
ACCESSION   KCPA01003719
VERSION     KCPA01003719.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 1002)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1002)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1002
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="409688tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>1002
                     /note="ultra-conserved element locus uce-1964"
BASE COUNT          296 a          180 c          223 g          303 t
ORIGIN      
        1 ttttttatgc aatgaaggct ttgatgtatt ctgctgtgaa gcacttgtaa gattatgagg
       61 agaaggagtg atgatcgata tgggagcaac attttggctg gacccgtgac agcagagcca
      121 tttccgccaa ggcagcgggg tgaataatgc aaaagccata ttccccttgt gtttaatctt
      181 gcattgtttt tgcaaagaaa atttctactt gctttctaag tcatgtcatc ctcggttgtc
      241 atcccgtctc tcaaaccatc aaaacggtat taaatgttgc aaagctgtgc agctagagaa
      301 ctttcaaaag tcagaaccca tttgcagagc agcccttgta gaaaatgtat tctgttctcg
      361 gcagaatttt ccttcagttc tttccactga gaagtttact gatttctccc agtggaatct
      421 gctggaattt atcggttcat ggttggcagt cacagattaa ggtaaatgtc gatccgtaat
      481 gaccctctac atgttagtat tgcagtaaag ctgggctttt atgtcaaaga tatcggagag
      541 ggagctatta cacatgacag gggtgatcaa gggactccag accaaggcaa gcattattaa
      601 atattgacta gttctgtgat ttatgtagag ctggaggaaa aaagtgactt tttaaccatt
      661 atatattctt cagcaacgaa aaccagccat ttatctcctg ctggtaataa agaacagagt
      721 gcctgcatat tttagtcggg gaaaacctgg tcttataaat gaggtggact ctttcatgat
      781 aacatttcag tttgctaatt gccaaaagca aaacaggcaa attggaagca attataagag
      841 ttgacttaaa gtgcctgcta tgttagttca actcaggaga actgggtggt ggtggaagaa
      901 tcattgggga atagaaccca gaaaatttca ttacatttgt tcattgttgc tgaaactttg
      961 cttttcaccg ctaaagaagt aaacagtgtg ttccagaagt ca
//
LOCUS       KCPA01003720             731 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 409801tic ultra-conserved element locus
            uce-1533, sequence.
ACCESSION   KCPA01003720
VERSION     KCPA01003720.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 731)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 731)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..731
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="409801tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>731
                     /note="ultra-conserved element locus uce-1533"
BASE COUNT          237 a          141 c          144 g          209 t
ORIGIN      
        1 ttattttaaa tttcattatg ctgggtaagg aagaagagtt ggacaggttt cggagaacat
       61 caaatgggtg agtagccaag caaccaaaga aagaaatata aagatgtaca taggttctca
      121 ccttggggct ttttattcct ataggaaatt atacaccagt gcctgttaag atccagtagt
      181 tgcagcggct tattaaatct acagcatatc tgttttattt aacttcttgg tggaattggg
      241 ccaggaaaac aaaatgtact taaatgctga attttttttc caggctgaat gcctttcatc
      301 cagtaagaca ttcaaagcag tgacccagca aatggattga aaaagcaatc ttccgtctca
      361 gtgccacatt atcattccta ttcagtattc tcggtgagat atctcaatca gctggatgtg
      421 tgtgtaagtg acagcgcagc ccattgctgg gttaattaaa catttgactt taacaccctc
      481 cccatcatta agcaaataaa aacagataat tcaaactgca cttcatccac ggggtacaca
      541 acatacatgt caaaattaag agagtccaag gccctcgggg agttctactc agggaggtaa
      601 tcagtttaaa tcttatctgg tttatcaatt attctattga ttaaagcagg gtgattatac
      661 aaaactccct cttgccacat gggatacatg taagcagagc aggacaacac acagaggctc
      721 aaaaacgatt t
//
LOCUS       KCPA01003721             496 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 409910tic ultra-conserved element locus
            uce-5736, sequence.
ACCESSION   KCPA01003721
VERSION     KCPA01003721.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 496)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 496)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="409910tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>496
                     /note="ultra-conserved element locus uce-5736"
BASE COUNT          139 a           96 c           97 g          164 t
ORIGIN      
        1 atggggactg tgagaaaaca ctaaaatgca caccagaagg aaaaacctcc tctaccatcc
       61 agtatactgt acatctcttg gctggaaaac atattctgga acatggtagt gtgcatggat
      121 gtgatgtgct actttcctta ctgtaatgaa ttttatgcct gtctgtttct gttcctttgt
      181 ctatttttaa ttcaaatatg taaaagcttt tcttaataca gagtcccagg tgtcagttgc
      241 tgcctggagt cccttttctt tcctctattg ttctcttaat tgttacttca aaacaattag
      301 ctgggcattc atatgcaaat gaatgcaaat gtacagggga ttgggtgtga gtgaatacca
      361 ccactcctta atttccactt caaggtctgc tggtatgaac aacaaaatta acaaaatatt
      421 tttcctgggc cataaagggt gaactcacaa ggattccagg gcaattgtta agattctgct
      481 ggctcttggt aagatt
//
LOCUS       KCPA01003722             508 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 410020tic ultra-conserved element locus
            uce-2289, sequence.
ACCESSION   KCPA01003722
VERSION     KCPA01003722.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 508)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 508)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="410020tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>508
                     /note="ultra-conserved element locus uce-2289"
BASE COUNT          158 a           96 c          113 g          141 t
ORIGIN      
        1 caaaactatg atggccagga tatgaaagat tcactgtgat gcccctgtcc ttaatgagaa
       61 atcacaagga agattactgc cactgcttgc ctatacactc tgacttatca gttggtctgg
      121 gagtttaggc tcctgtgata ttgaatgaag attataagcc agatgggcca caaattctgt
      181 caagccttct tggcagctgc tctcattaca aaagccagac agccttttcc aaaaataaga
      241 atgtgaagca aattgggctt atagaccctt ataatgcaat tgcacgcaga gatggggacc
      301 tgagcgggca ggcagaaata ttattgatgg ctgctgaaaa cagggaataa gatgttatta
      361 agccaagtca gagatagata tcgatagcta atataaagcc tttattggtt tacaggctcc
      421 aggaaagagg gttcagagct tcgacccttt gctttgcttt taatttcact agagatgtag
      481 ggtttatgaa taaaacatat cttcactc
//
LOCUS       KCPA01003723             337 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 410128tic ultra-conserved element locus
            uce-2336, sequence.
ACCESSION   KCPA01003723
VERSION     KCPA01003723.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 337)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 337)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="410128tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>337
                     /note="ultra-conserved element locus uce-2336"
BASE COUNT           95 a           65 c           75 g          102 t
ORIGIN      
        1 taactgggag tatctgaaag gggttctttg ctttttttta tttgcctgac tgacagagga
       61 tttaaatgca aagtggatct aatgcacacc ctgaagtcgg ctggcagtat gcaaatgacc
      121 tgtcagatta aaatctgaat gaaagagata acaagcttat cttcataaca aaagactctt
      181 agggcaaact atttgacgca gtgttgatgt ttgttttaac ccgtggactt tggacagtgc
      241 aatatttcag gagcttcgct ctcctcactc cccagcgctt gcacgcctgt gtatttgtat
      301 ttgcactggc aacaaaaggc aagtgctgtg ataataa
//
LOCUS       KCPA01003724             882 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 410242tic ultra-conserved element locus
            uce-1052, sequence.
ACCESSION   KCPA01003724
VERSION     KCPA01003724.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 882)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 882)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..882
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="410242tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>882
                     /note="ultra-conserved element locus uce-1052"
BASE COUNT          266 a          177 c          151 g          288 t
ORIGIN      
        1 ggtaattcca cagaagatct cacgccgcag aaacatcatc tcctcataat ttctgaacac
       61 taatacaaac agatttctgt ctgaacatct taatgcaaat atactgcagt tgtctagtgg
      121 aaaacagcac tgtaatgact tccactatta aatttgtgtt gcatttgaaa aggcaatgac
      181 tgcatatgaa gcgctaaccc tggttcattg tttctctcat ctctccgaac atccctattc
      241 tggatccttt atttatcaag attaatcact gtaggcatca ctttttgtgc atgccatacg
      301 ttcataggaa cagcacttaa tccagaaagt tgccggatgg atggctctta caatgggcat
      361 ttacctctga aattggtgtc tatgcttgat gttgcatgca tctagtttgc atacaaataa
      421 agaattatac ttgtcatgaa gcaggtataa tcaatgaaag gcacagctgt cttaatcagg
      481 tttcgttagc ccgagcagct ctctgtgagc aagataaagt gtttttcaga ggtgttaata
      541 attactcata atctctccta tcatatcgca agacttttta catgcctttc aattttaagc
      601 aacgattaaa gcaattaaga ttgctgcatt tacaagctat ttttcattcc cagaaaatat
      661 cctacaccta cttgtccata tggtactttg caattggaac ataaggatag tttaggaaaa
      721 ttacgtatgc tcttatccct aatctgccta ttactggata gtatcttaac taatgaacct
      781 gactttcaaa gctgctctta agtggtggtc ttgtcatatc agagagacac aaaatgtgta
      841 acccaatcag tcaaggatgc tttgaacaag tttgttttgt ta
//
LOCUS       KCPA01003725             543 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 410351tic ultra-conserved element locus
            uce-3377, sequence.
ACCESSION   KCPA01003725
VERSION     KCPA01003725.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 543)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 543)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="410351tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>543
                     /note="ultra-conserved element locus uce-3377"
BASE COUNT          179 a          107 c          109 g          148 t
ORIGIN      
        1 aatcaaaagt gagcagacaa aggtcaaaat accaaaagcc acaagaacat ttacacttag
       61 gatataaaga tttcctaaga aactaatgcg tgctcttccc ccagataaag cagacacctt
      121 atcttcagga gtttacaaaa tggagccaag ctatacaagt aaccacttaa ctaaacgaag
      181 gcctggatct tttagcagtc tgcagtcatt aaagctctcg gaaagtctcc caggagccaa
      241 tatgcttgct taagtatatg ctgtaaaagg tccctgagat ttacaaggaa ctgctccatg
      301 ctaagctagg caccatctga taaacaagca attttagctt caggctaaac gatgctcttt
      361 gaggctttga tttacaatgc tgcagatgat atatttgtag ttctaggata ggttctgctg
      421 tggacctgct gtgattactc atccatgaac taagttaggg ctcagatctt caactaggag
      481 gtcagaaaat tgtcagtgga gcaagaaatg tttgataagg tttatttaga tgctaaccac
      541 att
//
LOCUS       KCPA01003726             295 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 410445tic ultra-conserved element locus
            uce-5042, sequence.
ACCESSION   KCPA01003726
VERSION     KCPA01003726.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 295)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 295)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="410445tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>295
                     /note="ultra-conserved element locus uce-5042"
BASE COUNT           68 a           77 c           72 g           78 t
ORIGIN      
        1 aatatttcat gcttggaatg tttgagccga gatgatcccc gatggctctt tttattatct
       61 tgccctgccg gctttgcagt tctctgtcag gaatgaagtg atggcgacca gtcacggcac
      121 ggatgaatgg atgacccaga tggagatcag tggcctcaac agttacattg tcaggcgtta
      181 catagcaacc cccaatgggg tgctccgcat ctaccccggc tccctcatgg acaaagcatt
      241 tgatcccacc aggagacaat ggtgattttt agggtccctt cagcaatcat ctccg
//
LOCUS       KCPA01003727             454 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 410660tic ultra-conserved element locus
            uce-7056, sequence.
ACCESSION   KCPA01003727
VERSION     KCPA01003727.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 454)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 454)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="410660tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>454
                     /note="ultra-conserved element locus uce-7056"
BASE COUNT          123 a           98 c           89 g          144 t
ORIGIN      
        1 aaaactgcaa ctttcattcg ctgctaattg tttggaattc tttgaactca cgtcttgcct
       61 ctgcctggta cacctcataa acagatggag tgtttgttga cgtttccgtg acagcttgaa
      121 aacttgtttc ctacctctga gctgagccct ttctgccttg tcctccatct gccatctcat
      181 tttaaaacta gcagaacaac tcgagtgaag caattccgac tttttccatc tgtgcacagt
      241 taattaagag ggtaatgaga gctccgaatg aacaagccct gcattaattc aagatatgat
      301 taagggaaac atccatatat atgtgcctac atgtgttttt aaaaagccgt gagtcccttt
      361 tgtctgtccc tgtacttgcc agaattatgg ttagggatga tttaggaagg atgactacgg
      421 aaaactgaat ctgtattccg aacatgaaat ctgt
//
LOCUS       KCPA01003728             703 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 410868tic ultra-conserved element locus
            uce-5012, sequence.
ACCESSION   KCPA01003728
VERSION     KCPA01003728.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 703)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 703)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..703
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="410868tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>703
                     /note="ultra-conserved element locus uce-5012"
BASE COUNT          195 a          132 c          139 g          237 t
ORIGIN      
        1 tgtctactac taaagtcaat ttctggaata aggctctgtt tcttaataat taatcatcct
       61 tctatatgga attagtattc ttttgttaac caagtgaaga caaaaggtat attcaatgta
      121 tttccaaaga ccttttaagt agcttaacaa agcacataat gcaggccttg tcttacaagt
      181 ccgtgatgat acagtttaat agtgttataa ggctatggtg gtgtgtagtt gtcacgatgg
      241 tagattgtgc tggtctgtat agatttactg tcattcttta ggcttttcat acatgacaga
      301 ggttgtctga agcacagcag ggacatgaag cttgcagggg ttaagtgtta cttgcctcct
      361 ggcttgctac atggtcctcc ctgcacacat acagagatga ggtgcagggt acatccgtca
      421 ccgggccgat gacatgatgg attactcatg tcattgtcag tacagtcaaa atcactctgt
      481 tgccgataag gtggcccctt ttctttactg tggttgagtg atgctatttt ccctctggtt
      541 ttaaaactgt agcttgcaca aacatccctt aaatcaaaga tggaaaagac tacttttaat
      601 tgtgcatgga ccatcaagtc caaattcctt tgaaaattac tttcagaata gacagatgca
      661 tatcaaatgt ttttcatctc tttatttttt ctcatcctga aaa
//
LOCUS       KCPA01003729             809 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 410978tic ultra-conserved element locus
            uce-4523, sequence.
ACCESSION   KCPA01003729
VERSION     KCPA01003729.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 809)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 809)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..809
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="410978tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>809
                     /note="ultra-conserved element locus uce-4523"
BASE COUNT          237 a          134 c          150 g          288 t
ORIGIN      
        1 ttttgagtat aatttacatt gacaaataat ggatcaatat ttaagttttg tcagtttgta
       61 tctgattccc tgaaacataa agttttttag aacatcaaag caagtaaaga gcactctcaa
      121 gttcaaaaca gttttgttgg tggaagagtt gaaaaaaaaa aagttttggg ttcatataat
      181 ccaggttgaa tctgtacttt tgtaaaggct attttatcac tcagagaatg tcacatcaat
      241 tgtaaagcca tcagcctcaa ggcttgttgg tgattgcttc atatttactg ttagtccagc
      301 aatggagatg gtacttttac agtctttgga cagactagtg agtgtgacat ttaaagtgtt
      361 gatttttgca gcacttatgt taattgttgt aattttcctg atgaaccacc attctggttc
      421 cctgatgcag ccaagatagt tttacatttt ctatgcaggc ctctttgcca tttggtctgt
      481 gtagtgtcag cttcgagtgc tactgaaagc agacaaaatt gcaagcaaat tgcatcagat
      541 tgccaacatt gtgaaaaggt aaattgcttg caaatctatt taaaccactg ccctattttc
      601 atcagcttca gtacttggta ttcatgattg cttaattggc gacctttcct attgtgtagt
      661 gctttatggt gtaatggaaa gcgatcttta ccaaaccaat tacccttttt ttctcagcac
      721 tacattattg ctgtgattgc aactgccagt cctttgtaaa tgaactttct gatttcaatg
      781 atgtttttaa aatgtaagat agaaaaaag
//
LOCUS       KCPA01003730             299 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 411087tic ultra-conserved element locus
            uce-6622, sequence.
ACCESSION   KCPA01003730
VERSION     KCPA01003730.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 299)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 299)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="411087tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>299
                     /note="ultra-conserved element locus uce-6622"
BASE COUNT          104 a           57 c           48 g           90 t
ORIGIN      
        1 attacagagc aagaaagctc ttttttaatc ttacagggct ggaatattgc aataactgtt
       61 ccatctgatt ttaaaaataa gatttgctaa aggtcaacgt atctcctggc cacatatgca
      121 gcaacattga aatttccttg gccagggaat aaaaagattc tatcattaaa aataaaagtg
      181 caaggacatc ttgcaagcct atagggtttt tagaaagaga aggagacatt tcgttatcaa
      241 ctagcaatca taagattttt aagcaatatc tctaatctgc ttctcttctc cccacaacc
//
LOCUS       KCPA01003731             596 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 411197tic ultra-conserved element locus
            uce-3695, sequence.
ACCESSION   KCPA01003731
VERSION     KCPA01003731.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 596)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 596)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..596
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="411197tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>596
                     /note="ultra-conserved element locus uce-3695"
BASE COUNT          205 a           89 c          103 g          199 t
ORIGIN      
        1 tccaaactat gcagtatggt ttgtgttgca gccgaaccaa aatacaaagt ttttgattaa
       61 tcaagcaagt ggtgttattg agcaaagcaa atctgtaatc tgagtaaata ttacacagta
      121 ttattaaaca agcttaaaaa agaattgtac tagacttaat taaggcttca agtaaagctt
      181 gcttttattg gcaatttttt tgttgcaaca agaaaactaa aaattaagag gatggttggc
      241 agcaatattg atatgctaat ggataaacat gctaatttag aaaaaaacta atcagcaaag
      301 acattactaa tggaaatgta ctggaaaatg gctaatgctg tatgcagacc tggtatctcc
      361 caaattaaga ggaactcatt ttgtgtttat aattgtaact tggaagctaa gccttgatct
      421 tctctatgct ttgctttggt taatatttaa agatatttca gatgacctgt cctggtacca
      481 tgacacctgt tcagcttctc tataattatg ctgctgaaat tacatcttct gtttattgaa
      541 aggagagcta aaagtcttac ttttttctat ttaatttacc agacacttaa agagac
//
LOCUS       KCPA01003732             639 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 411306tic ultra-conserved element locus
            uce-4039, sequence.
ACCESSION   KCPA01003732
VERSION     KCPA01003732.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 639)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 639)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..639
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="411306tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>639
                     /note="ultra-conserved element locus uce-4039"
BASE COUNT          213 a          112 c           90 g          224 t
ORIGIN      
        1 cacatccttc atgaattata cattaaactt tgtctcacgg tgactgttgc taaaagactc
       61 tttcatcact cttatgttaa acaaaccaca atggttttta aataagtctg atcaaaggag
      121 attatgataa agtgctagga atgacttcca aaatagtgta catttcatat tgatgtgttt
      181 cagtgcaatt tgggtcatgt tcctctgctc ttagttgtta gcagaatgat gggcagacca
      241 ttgcattcac tttcaaatac aacattgata gctggattta catttctttt taagactcag
      301 ctttagcaaa cacgccttag atttcagaca taattctgtt attcaaatgg gagaagagtt
      361 tgatagctat gctaatcact tttatctgag aaaacataac taatagcttg gtttacattt
      421 gcctgcattt atgagcataa ttttagcaca taattttatt gcaccataaa acataatact
      481 gcattagcct gctcttaaaa aaagttacct tagagtgatt tgtacttaaa ccttcaccct
      541 acatttaaat aacagtatcg ttttaaaatt ttaacctttt aaaatcaatt taaaaacaaa
      601 cttgtataac aatttaacct acaaggctat tatctgcag
//
LOCUS       KCPA01003733             659 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 411417tic ultra-conserved element locus
            uce-1193, sequence.
ACCESSION   KCPA01003733
VERSION     KCPA01003733.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 659)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 659)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..659
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="411417tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>659
                     /note="ultra-conserved element locus uce-1193"
BASE COUNT          206 a          116 c          124 g          213 t
ORIGIN      
        1 tgttaccaaa gacaaaaatt agggtgggag caacaaggct tcctccataa tagtgttttc
       61 ttcatttcaa gctgatcagt aggaagtgga tttagaagtg ctttaaatca tttcacatca
      121 tttactggta atctaaccag catgaactgc atgtacccta agtgctgatt ttttaaaaag
      181 cataagagga agagcaaaag aactttttat tctaagtcat tctgtaattt acacattttt
      241 gtatcagccc acttactagt gccatacata agtgtttcct ctgaacagat ttaattttta
      301 attttcctga atcagtgtta accaggaaaa aggtaattgt tgtcaagagt attcaaactg
      361 tcagaatatc attcaatcta aaagctgtta gaatctgtgc aaaagtaatt actgaaactc
      421 tattcaactg taataataac ctgccactga tgacagcaat tactggggaa agtgtaatag
      481 aaatcaaagg cgcatttttc tctgacaagt acatttctaa ctaaggttta cattggttga
      541 atagtgttga caatgatgat gtgctgtatc actcttaatc acggctggca tgatgttaca
      601 gttcgagctg ctcgggggga ctaattgcct gtttcagctg acactgtccg tgctctctg
//
LOCUS       KCPA01003734             643 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 411528tic ultra-conserved element locus
            uce-4436, sequence.
ACCESSION   KCPA01003734
VERSION     KCPA01003734.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 643)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 643)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..643
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="411528tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>643
                     /note="ultra-conserved element locus uce-4436"
BASE COUNT          231 a          113 c          141 g          158 t
ORIGIN      
        1 ttgaaagaga aagcaaatga attctgccac attcccatca ctgtacttgg aacataatgt
       61 aggccaagga aaattgctgc agaagcacct tttggaaata tggaccgcaa atgcttggta
      121 agaagtgagc tcatacgtag cacaattaca tttctgaaca gagattagat taggctcttc
      181 tggagtagca aattaagaaa aatttacctg attgttacaa gcaacaatga tgtgctccgg
      241 ttctggcatt acgttgcttt tctgggacac gagagtatct ttggtacgtc ctggaagacg
      301 ataggaagaa aaaagtccat agtattgctt catacacaga ggatgaccag acagctgtcc
      361 acgagaaaaa tcagcaggta aagcatggct gcagagaagg aaaaaacaaa gccagaggga
      421 gagagacaga aaggaaaaga aatctaatct gtcctttgtt ctgttacaat tagatcaggt
      481 ataacacaaa ttgaataata aaatgagata taagggaaat agatgaattc ccataccaaa
      541 gttaaataca tcattcctgg cagctccatg catattcatt aagcaattgc attattagtg
      601 gaaatggaaa tagtttgcca tgagccctgc ctagatggga ccc
//
LOCUS       KCPA01003735             453 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 411736tic ultra-conserved element locus
            uce-3348, sequence.
ACCESSION   KCPA01003735
VERSION     KCPA01003735.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 453)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 453)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="411736tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>453
                     /note="ultra-conserved element locus uce-3348"
BASE COUNT          139 a           77 c          113 g          124 t
ORIGIN      
        1 attataatcg ttgcaaggaa gcgtatacac agatgttgtg ggagtttgga aaaaaaagaa
       61 aaaacccctt acgtagctga cagcctgaca actttgcata tgtgtgttaa caggagaatg
      121 tgctgtgttt aggatgaatg gagaagcggg cctaaatgac tttcagatta gctggaacag
      181 atggaagggt cacagttgaa caactttaca caggaacata aaggcaatgt tcaagtggag
      241 ttcattgcct ctgacagata ctgtcaatcg gggactctca gttaaccagc agcctgtcct
      301 tttaaagatt aaatttattg tgaggcgctg atgggagttt atctggtcta tgataacctc
      361 caccctcagt gactagcatt ttcaaatcaa gcacaagggg atgttttgaa gagaagtgag
      421 ttacaggctg ctttgggaga tatcatttct gca
//
LOCUS       KCPA01003736             559 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 411837tic ultra-conserved element locus
            uce-2478, sequence.
ACCESSION   KCPA01003736
VERSION     KCPA01003736.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 559)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 559)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="411837tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>559
                     /note="ultra-conserved element locus uce-2478"
BASE COUNT          195 a          108 c          106 g          150 t
ORIGIN      
        1 acatatacag gaagaattaa cttagaaaga atgattagta atacaaacca acccttggct
       61 cattgagtga aaaagaaatc atcatgcaaa ccatcagcaa gcaaaggtca gaggtcgtta
      121 gaggctcaga aaaggggttt cccacattgt ccctgcagca gagtcacagt ttccaatgat
      181 cacttttgtg actatgcaac tgggctcata ttactagctg caacatcaca aaaatgacac
      241 tggcaaccgc taattagctg gcaaaataag aatttgtcca tttttaaagt gagcagtgtt
      301 agtaaatgcc attgcacaca gcgagaagtg atagcataat agatatatat tttaagcaaa
      361 gccctcacat gtgatgctaa ttatctttta gcttagcagt ccctctttaa agtgtaaatg
      421 tgctccctct gggctcaaga aatatttaat gacacatatc agtgcatgac taacaagcta
      481 gtccagagca ataatgattg gtctattgtt caaaatgaaa ttaggactcc agaagcattt
      541 aaaactgacc agtggtttc
//
LOCUS       KCPA01003737             521 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 411944tic ultra-conserved element locus
            uce-1558, sequence.
ACCESSION   KCPA01003737
VERSION     KCPA01003737.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 521)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 521)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..521
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="411944tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>521
                     /note="ultra-conserved element locus uce-1558"
BASE COUNT          152 a          116 c          118 g          135 t
ORIGIN      
        1 ctataaatct gttttctcat gcccaagtag tcgttgatga gacatgtgag gaaacgcaga
       61 acagagcaat aatcataaaa taaaagaatg agacagaata aagctttttt tttagaagac
      121 acacgcaaaa catttgttct gctccagctc tttgtgaact aattggctct cctggaggga
      181 caggtaattg tacttgacta cacaagctgt cctgaagctc ccttggaaag ctccagtaag
      241 cttccagtgt tagcagccat caaggatttc acaggtcagg catcggatcg atacagctaa
      301 aagcagcagg gactgtaatg tcgacagcag gtttcagaaa acgctgcaag tgccagtttg
      361 ttccccttca tgcagaagct cgagacagct taattaaccc ttggaaaata caatttatcc
      421 agagggtctg caggtccgta ctgggcctta ttggtgagct gctagcggag atactatagc
      481 tggcagctct gattcccatt tcccccgtac tcagttagga c
//
LOCUS       KCPA01003738             805 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 412056tic ultra-conserved element locus
            uce-7610, sequence.
ACCESSION   KCPA01003738
VERSION     KCPA01003738.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 805)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 805)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..805
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="412056tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>805
                     /note="ultra-conserved element locus uce-7610"
BASE COUNT          243 a          153 c          165 g          244 t
ORIGIN      
        1 gctagcactt tgcatgtatg aatgacaaag ggacaccact ttcatattga ttcaagcaag
       61 ccagtggaag aatgtttaaa catcaagtgc ttgatgtccc agtttgccag agcacctgga
      121 aatattaaat taattccagg tgttctgcca gcttgctgct tttacagcca cacatacaaa
      181 atgtggctcc cagttccaca aataaaaacg gaatggtttc tgctcctaat gcctcgataa
      241 ctctgacata ttgcaagttc tggaaagaat tttaatctac atagaatggg gaggggagta
      301 agattttaaa tatgctgcat acaatttgtg atggtcatct ctaaaatgca gctccattat
      361 ccttttccat ttggaatgaa tgaggctaat taatttcagg ccatacttga tgaggtcagc
      421 accatacgaa gggtgcgtgc tagacattgc taatctcttt cagctgagag tgatgaatta
      481 aagatgaagc attcctttgc aggcctaatt tagaatgtat atcaaaaacc tacagcaaat
      541 aatactatac cctacaacaa aggaaaactt gttctctcag gctcccatct agggttgatt
      601 ttaaaggcat tttcatttcg ctttggaatt ccagctgtgg atgggtgaaa cagttcagaa
      661 aattcaagct ttctctcttt ctattgcttt tatggacaaa agtaggcaag ttaaggggag
      721 agagaaactg gttcgtgttt gatcctgtat atcctgtgat tctgactgta cactcggcat
      781 tcagtaaagt acctgtgatg tgaca
//
LOCUS       KCPA01003739             777 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 412168tic ultra-conserved element locus
            uce-1601, sequence.
ACCESSION   KCPA01003739
VERSION     KCPA01003739.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 777)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 777)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..777
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="412168tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>777
                     /note="ultra-conserved element locus uce-1601"
BASE COUNT          174 a          198 c          173 g          232 t
ORIGIN      
        1 tggaagctga cgatggatgc acaggtcctg tgcccctatc cagtcttccc atccccaggg
       61 tactggggac tggacagcag gagcaaaact tcttcagctg aggcagtgag tgctggctag
      121 catacaggct gctgcagctc tgtgccatca gtgcacacca agggcagctc ttctgctctc
      181 ctctttctcc agctctaggt tttactgtgc ttttaagtaa ttgtcactcc ttagggacaa
      241 gcctttgaga aggcagaggg ctcatgtaac tctggatcag taaaggaagc agctcaatta
      301 gcatttcaca cgccttttct tccctctctt cttaccttcc ctgcagcggg catgctttcc
      361 ccttaaagga ttgtcctgtt tctgctcctt gccagcgttg gcagggtgac agtagtcgag
      421 tgtgcaaact tgtgctattg tccccaggcc agggggagtc atggagaccc actaatatga
      481 cacaggaaaa tgtttgctga tggcaattct atgggctttg tctaactctt tctccatcat
      541 gacgactcga tttaagtctc taactgtttg actacagatg caagagtact atccaactcc
      601 atccttttgt tcgggtagtt tgaatgggta attcagcttt tgtgtaactc aattgagggg
      661 gcaaacataa agacaagatt cttgagcgct caagctccct ttccatggat atctgcacat
      721 ctctttagag atttgttcct ttcctacctt tttctgacat catcctcccc ttaaaaa
//
LOCUS       KCPA01003740             502 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 412278tic ultra-conserved element locus
            uce-2599, sequence.
ACCESSION   KCPA01003740
VERSION     KCPA01003740.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 502)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 502)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="412278tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>502
                     /note="ultra-conserved element locus uce-2599"
BASE COUNT          182 a           96 c           74 g          150 t
ORIGIN      
        1 gttttataga agacgaactt ttaaaatatt tataaattta catgaatatc atccatatat
       61 accatgacgc atttcaataa ttattctaca atacaatagg agtgcatgct caaacaaaac
      121 acctcagcag tattttaaag cagtaaacca cctagccaat ttctgtacgt tctgtagttt
      181 ttctaatcca ctctccctgt ggttgagcaa aatcgaattg cctctcacat ttgcagacag
      241 ctctgtgaag gtgataatag agctgctccc tgctgtcatg aggcaggaaa taggaaaatg
      301 gcatatgggg ctagaaagaa ataaaaagag aactaaacaa gaacaaaaga gatttcaaca
      361 aaggacaact ataacccaat atgctttgca agttaatctc ttttcataat aatttaatgt
      421 acctaatcat ttatctgcac acttctcaaa aattcaaatg cttgatatca acttctcggt
      481 aaagttttat tgcccaaaca tt
//
LOCUS       KCPA01003741            1004 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 412390tic ultra-conserved element locus
            uce-61, sequence.
ACCESSION   KCPA01003741
VERSION     KCPA01003741.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 1004)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1004)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1004
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="412390tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>1004
                     /note="ultra-conserved element locus uce-61"
BASE COUNT          322 a          226 c          155 g          301 t
ORIGIN      
        1 tatttactaa catttcccca tgtgtttctc cttttcagag ctgtgattat ttttttttcc
       61 cctaaagtat ctgatcagag attgtccggt aagagcactt tattagatca tcagtcagag
      121 ggttttacaa gcaccaagag ctatgggctc aaatgcagca catcagtttt aatagccgaa
      181 ggtctaatag taaactgcag atactgctga gaactttcca tgcactgaac tcttgaaaaa
      241 gcaccatctc tcaagcttaa atgcagctgc ctctttcaat gccgcaaatg ggtaaatttg
      301 acaaaaaagc caccattaag actacatgaa aggctcaaga caacatcctt tcaatgcttt
      361 gtacttcagt aatcagatgt acttactcac cccctccccc aaacccgatc aagaactatt
      421 tctgaatggt aggaaataat tccactttgt acatctttta gttaatcaag actttctatt
      481 cagcaatttg accttttgtt caaaacagga ttatcagttt tttcgccagt taccaagggc
      541 gactcgcatg gtgaacataa ttgcaataat ttgcaaaaca ccatggcaac ccacattaca
      601 actaggtaaa tactggtctt ttgtgctaca ttgttatttt cagagatgct gaagtcaaag
      661 aacgaatgac aaatgaacac aaaatttata tttgctttgt ctcaaaagag aagaaaattg
      721 ataacaagaa ttggggggaa accgactaca gctgtaattt ctaacttgat taattaggat
      781 ggtaacagtc cttaacagta tattcaacaa acagccctga cttagtctct ccacccacct
      841 ctctctcttt ctacactact accactaacc cccaccccag acaaattttt tcagctagga
      901 gaacaaacaa ctccatttgc tcttttcttc aacttaatgg aatccttaat tacagaatat
      961 tgttctcctg ctcttcatta cacagaaaac tgaaagtgag agag
//
LOCUS       KCPA01003742             731 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 412499tic ultra-conserved element locus
            uce-7105, sequence.
ACCESSION   KCPA01003742
VERSION     KCPA01003742.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 731)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 731)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..731
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="412499tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>731
                     /note="ultra-conserved element locus uce-7105"
BASE COUNT          215 a          127 c          152 g          237 t
ORIGIN      
        1 gcactcacag gatggaaatg cagcctgaca agtctgaagc tgtgtacaga aagagacaga
       61 taaactctgt taaccacaga agcaggtttt aaatacatta aaatatttta tcccattatt
      121 tgttttgacc aattgaccac aatattaaaa attcaatcat ggagcagctg acaagtgcag
      181 ttgcctaatt ttatttaagg gttctttcca tttttccatc ctgttaacac tgctgcctgt
      241 gcccagacag taatgggctt cttgtatgcc cacgactgtt atgatcatgt aaatttattg
      301 gtgcttagaa gaagcgagct attaaaacat tacaacaacc attacagcca ggctcgtgtt
      361 ggctttcgct cccaatgaac atatgcttcc gagtgaatgc ctaaactctt atttatggat
      421 ttaatttaat atgcggaaag aattcaaaat taaattttgt gtctgcctcc agagagtgtc
      481 agtgtataat aacatggtaa tttttacaca tctttatgag aaatgggaaa attaattctt
      541 tctgacaagt tgtaattatt cgacttggaa cagttgcagc tgagcagttt gcatgcctgt
      601 tgtctgttat tgcacagtgt aaggggaaaa cgtggggatg gagatatatt gtgtgtctga
      661 gagtttctaa tagcttctga cattttagcc ctgcatgtta tcagggtgct ctttaaagga
      721 gtggggactg t
//
LOCUS       KCPA01003743             737 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 412614tic ultra-conserved element locus
            uce-5404, sequence.
ACCESSION   KCPA01003743
VERSION     KCPA01003743.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 737)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 737)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..737
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="412614tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>737
                     /note="ultra-conserved element locus uce-5404"
BASE COUNT          204 a          160 c          152 g          221 t
ORIGIN      
        1 tttctcacaa aggagctgca agtgttcctc tgcaccacaa aaaggacctg ccaatgggtc
       61 taggacagaa agagttaaac tcagccgagc actagctcca acacagttaa tccatataaa
      121 gctcatggat ttctctgcag tgatctttgt ggttgtcatt tgcattttcc ttttgtgaaa
      181 tcttttcttc tttcctttta cactcgtatg catgcagaaa ttagcatatt gtaccgagag
      241 tgggagatgt aagaagccga ccccctgctg ttcagcggat tgtgcaatct gcaggcggca
      301 tcaatttttc agcagttttc tcatttctca ttacagtcag ggcaccgcac agctcccgat
      361 tcaatacaat ccctagtggt cctacagaca agcatatggg ctgtcgaata gccgtactgc
      421 tacttttata gcattaatat ccttgtttat gcttccaccg taattaatcc tggtattaat
      481 atagtttggg cttagcttta ctaattatgt atgggctagc aggataatta tgtcagcaga
      541 ctctggcgct gatacttgac agcagtttgc taaccttagg agctgcacat aaacactttg
      601 gctgatcctg ccttggaagg aaggcaagga gaggaggagg ctgtatatgg cgactcaata
      661 tctgatacgt ataaatactg ttcttaaaaa aaggaaattt cacaatcaca ataaagttgt
      721 cctcaggtat caaactc
//
LOCUS       KCPA01003744             659 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 412717tic ultra-conserved element locus
            uce-6748, sequence.
ACCESSION   KCPA01003744
VERSION     KCPA01003744.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 659)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 659)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..659
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="412717tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>659
                     /note="ultra-conserved element locus uce-6748"
BASE COUNT          201 a          117 c          133 g          208 t
ORIGIN      
        1 ccctcaggta cctgtgccag gtggtggatg gagcaaccag agatgcaaac gcggttcgga
       61 aactgatggc gatgatcgac cggctttctc acacgggttt ctcaagaagg tgggagcaga
      121 caacgttatg atctaataaa ctttattttt taaaaatgac catttttcca ttgtctttcc
      181 taggaaatta aaccctttaa ttcataccta ccctctacat aatggttatt gagtactcca
      241 caatatatta agtctagatg ttatggtaca tgcatacact ttcaggctgt tgattaccca
      301 ctgtcaccaa tacacataaa tggaaaaaag ctatgaaact gtatagggct gtatatatac
      361 ttgtctcagc ttcattagag caggaaattg ctgtgatttc cagcaggtta cgtaagtaat
      421 gtccaaaaaa aactatgaac agagtaaagt acaagactgt tttgaggaga ctttctactg
      481 tgtactttaa aacatagtaa aatttctttc acaaaactta gttacatggg tactttgttt
      541 tatagtgcat tatagtctag gaagtctcat taaaacactc ttttctttct tttgttaggg
      601 tggtttgagt agagactatt gctggggcag gggaagagat tattctaact tcagaggac
//
LOCUS       KCPA01003745             270 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 412819tic ultra-conserved element locus
            uce-7100, sequence.
ACCESSION   KCPA01003745
VERSION     KCPA01003745.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 270)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 270)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="412819tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>270
                     /note="ultra-conserved element locus uce-7100"
BASE COUNT           99 a           50 c           45 g           76 t
ORIGIN      
        1 caagatcatc cagaatcaac ccagtaaaaa gaattgtcat aaaatctcac accattgact
       61 tgtaaatgga attgaatctg tggagtctac ataatgatcc tatcaaaaag ggaaagagct
      121 atcacattca tataacagat gagatatgaa atgactacta tggcagatga acaccccaga
      181 ggtattttgc tttattctac tcactgcgtt tatatctcca gtttctctaa ttttagttat
      241 cctgaggtct aaagacaaga agagaaagac
//
LOCUS       KCPA01003746             598 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 412926tic ultra-conserved element locus
            uce-930, sequence.
ACCESSION   KCPA01003746
VERSION     KCPA01003746.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 598)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 598)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..598
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="412926tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>598
                     /note="ultra-conserved element locus uce-930"
BASE COUNT          192 a          129 c          113 g          164 t
ORIGIN      
        1 ctacttcaca ttcccacact ggagttttct ttgcaggaag ttttaaacat tgcaaacaga
       61 aataataaag acagtgcgac tggagaagaa cagcagtcag ttcactgcag gcagcctctc
      121 atacctctgg gccaaattca aacctggtga aaacagaagt caatcttcca gcaacagggg
      181 gattagcccc cagtcgcact agctttgact ttgctgcttg atgtttatat cactagagac
      241 caaagaatat acttgccaga caagaatagg aatcattaag tctgtggtcc aaagtgaggc
      301 gctgaaccat ctcaaagagt gaagcgtggt caaagttaca gggattggaa gagataaatt
      361 catccatgcc atgcttttga gctctatctg catctgttca tttatacata tagagaaaga
      421 caccatttag agagatataa gacattttag ttgacaaata aaaaatacac agtatgaagc
      481 atgaaagcca agtatctcct cttccctcca ttgccattaa gttttctctt tgcaggctat
      541 acagtacact tcacctccca ttgtcaactt gcatcagtta tggactatat tattgcat
//
LOCUS       KCPA01003747             498 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 413030tic ultra-conserved element locus
            uce-2111, sequence.
ACCESSION   KCPA01003747
VERSION     KCPA01003747.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 498)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 498)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="413030tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>498
                     /note="ultra-conserved element locus uce-2111"
BASE COUNT          161 a           91 c           97 g          149 t
ORIGIN      
        1 tttttgcaaa gctgtcatat ggctggctta gatgaaactg gaaggcttta tgtgggtaac
       61 atttaacttt aaacattctt catggaaact tacatggcac ataatttaca tattcaatac
      121 cagtgacaat ttacttctcc catctgagca gggctttcaa ctatgccact tgaactaaat
      181 taataaacag taattagaga atgttgtgcg agcgagctgt tgatgttgag aagattctaa
      241 tcaacacctt cttttaaggg ccaattaaag ctgaatgtat gcaatataaa catcttcttg
      301 tatttagaca tgaactggtg aacaaggtaa aaatcagaac aattacagca ggttagagat
      361 gatccaatgg caagatgaag ctttgaaaac tgcagtaatt tctgaaaacc aatggccacc
      421 ttccatggag aagcactgac aacttgtgcg agttacctca atgcttttac tgtcaggctt
      481 ttctcgggaa gcagctct
//
LOCUS       KCPA01003748             702 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 413139tic ultra-conserved element locus
            uce-2043, sequence.
ACCESSION   KCPA01003748
VERSION     KCPA01003748.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 702)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 702)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="413139tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>702
                     /note="ultra-conserved element locus uce-2043"
BASE COUNT          239 a          108 c          121 g          234 t
ORIGIN      
        1 cttctgaatt aatttctgta ggagacaata tggatgcaat gtttttaaag cttaatttag
       61 attcaaatta atgtgaagac aagctccttg agtcacctag tctttctctg tggaatcatt
      121 tctaattgaa tgttaagatc aaagtttaag tttataagaa agaaaaacaa gtgcagataa
      181 atagttatta tctgacatcc ttatgaaaat tcatgacctg ccgctttatc agagaccttt
      241 taagaattct aattgtgaag tatgcataac tattaaatgg ctagagcgct tcagtctctt
      301 gataagaagc gagttaaata attgtcctgt ttaacttgtg cttgttaacc tttaaggtca
      361 actagtttga acatacgttt aatgaaatcc tggagccaga atttatgata ctgctgctga
      421 atgttaaatt ggacaattta cataagcagg acattaacct tctgagcact aaatagcatt
      481 ttagcactta gccactgggg acaataaggg acatgttcta tatatttgtg attagcttgc
      541 ctggaaactc tcatgatgac caattggcct accaagttta gcagcataat taaatgaatg
      601 gactcagcct aagtaaatta tcagtgctgt gtacagtata tcattatagt cccatggaaa
      661 aaaaaagata tgaataattt aatattacat tactaattta tc
//
LOCUS       KCPA01003749             434 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 413243tic ultra-conserved element locus
            uce-2300, sequence.
ACCESSION   KCPA01003749
VERSION     KCPA01003749.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 434)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 434)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="413243tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>434
                     /note="ultra-conserved element locus uce-2300"
BASE COUNT          129 a           83 c           84 g          138 t
ORIGIN      
        1 tttaaaattt gggctgatct catattaatt ttcactgcac ttaaaagatt gtttcaacat
       61 ccaagtgaaa atgattcttt tttcagtgca tactagactg acttccccga tcgcagcaga
      121 ccgaattgta tttttgtgag tctcttcaac aggcagccaa attttttccc tcctgcacgg
      181 tttgctgttt gcttaagcaa aaatccaatt tctggagaag actccacaag ggctaaattc
      241 cctgccattt acaagtgtcc cattagagta gctttctata tggaaataac agtccaagag
      301 aaggagagaa ggagtaggtc tgaggtccac tcttactgat gtgttttact atttctttga
      361 agactagagc tgtgctccca tgagagtaat attggaatac aaatggctca aaatggaggt
      421 tctttaaaag taaa
//
LOCUS       KCPA01003750             636 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 413347tic ultra-conserved element locus
            uce-5531, sequence.
ACCESSION   KCPA01003750
VERSION     KCPA01003750.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 636)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 636)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="413347tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>636
                     /note="ultra-conserved element locus uce-5531"
BASE COUNT          186 a          119 c          115 g          216 t
ORIGIN      
        1 tttttcatca tggatgtagc ctgaatatcc taatttatga ccatctggtc tccagtcaag
       61 cagcccatat gaccattccc taggtcagct aatagtcctc tgtagaaagc cataaacacc
      121 tccaagggaa ctgcccttcc ccagcccttt gtacagcaca cccagcaggg ccagtcattg
      181 tatctgttta tcctttggtg tttggtaatg gtaacgttca tttcatttag gatttgattt
      241 gtttacgaac taataaatat gatttataaa aagtgcgtgt ggttcactaa ttactgcaca
      301 tatggcgttt tcattttgta aaactggcat ttgctttcta ttatgattat gtctctgttc
      361 accagtgcta attagtttga ttagacagat aactttaacc attattagga ctagattagg
      421 ggaactttgc atgcagggga atgcagggag aaagggttca tcaccagtga agataggtca
      481 gcaacacaaa gattgttcct cattaaatat tttaaaatta gtttttgttt tgttttccac
      541 atagaagaac tgagaagcat tcacatttag ctacttacaa aaatccaatt aaacacagtt
      601 gtttagcatg aatttgttaa tcagagttaa tctttc
//
LOCUS       KCPA01003751             568 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 413452tic ultra-conserved element locus
            uce-5982, sequence.
ACCESSION   KCPA01003751
VERSION     KCPA01003751.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 568)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 568)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="413452tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>568
                     /note="ultra-conserved element locus uce-5982"
BASE COUNT          191 a          116 c          106 g          155 t
ORIGIN      
        1 ttcaactttt acagatataa aagggagttt agaatgtcag ttttcactgc acctagtaca
       61 aggcaggata acatcatcta gcaccttttc cttcctgtat tacctagatc ttaattccag
      121 agatattgca tgtcacacgc gtttccaaag caagagaatc tcttgatgat acactgatca
      181 attaaaaatg ccttgttttc aagtttccta aggtaacaaa catgaatttc agtagatatc
      241 agatgaatgc atgacaacca tctaaccagc ctgcagattt aggaatccac atgtaggctg
      301 agaagatgcc tgctcacaca cacacgatgc taaagaaatt actagagcag cactgatata
      361 gtgctcaatc tgttttggca gaagcttggt aaatacctta aatatgagtg attaatttac
      421 tcagcagaca ttgtaggaac caggctgtgt taacatggac acatgccagg caacacaggc
      481 ctcaatgaca gatctgagac acagaaagct cagagattac ataatggaat tctgcagtga
      541 ctattcacaa ttttaggctc agatgcaa
//
LOCUS       KCPA01003752             757 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 413562tic ultra-conserved element locus
            uce-518, sequence.
ACCESSION   KCPA01003752
VERSION     KCPA01003752.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 757)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 757)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..757
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="413562tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>757
                     /note="ultra-conserved element locus uce-518"
BASE COUNT          232 a          160 c          125 g          240 t
ORIGIN      
        1 tgggacaaga gaggtcatca gtagctgtgc atcatctgct ttgcatccac ttagcaatga
       61 gattcctaaa ctcattacca gtaacttctg ctggaaaata tctataaata caataaaagt
      121 acagctatct gtaaaatgta tttgccataa aaacagataa aacaaaaagc ttagtaaaaa
      181 atgaacagta aatatgccag ctcccataaa atattatata ccacagcttg cttaatccta
      241 ttctcttact ccaaagacag cagtgcattt ttttccatgg ggtcttcctt atccccaaaa
      301 cacatctgtc ttgagtttct ctcagatttg tcaggtggat cagtgctccc cagggcctgc
      361 tccatctgaa gtattttaat ttgactaaac acctgattta ttttatctct ccgatgagaa
      421 aggcagtttg tcttaataga gcctgtcagc ccacagtccc attcacagca atttacaggc
      481 agccagggat gctggaaaag aagagtgctg tgattctgta ttttatcctc ctccagaaag
      541 cacctaaaag cagctattca ctgctactgc atgtggcatt ttagaactga attagctttt
      601 tattcaagta actacacttg ttgtgaatag cttatctgta aaattgctac attcactact
      661 gattttatta acctttggct ctatcacaaa atggtcttca gttaggaaag acctttaaaa
      721 ttgacacatt tttcttaggg gcctttattt cagtgac
//
LOCUS       KCPA01003753             636 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 413671tic ultra-conserved element locus
            uce-1417, sequence.
ACCESSION   KCPA01003753
VERSION     KCPA01003753.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 636)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 636)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="413671tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>636
                     /note="ultra-conserved element locus uce-1417"
BASE COUNT          214 a          113 c          134 g          175 t
ORIGIN      
        1 ctactgcagg atcacagcgc atcatcagaa gagcagaacg ctgcaatcca aacaaagaag
       61 aaaaaaggaa aaaaatgaac aaccggaaga gttagaagct tttactatta actatctcca
      121 attatttctt tttttaattt acttttactt tatttctttg aaagaatttg tggctaatag
      181 tataaaatat tcttacatta cttgcttgta attaaatatt ttaagctgtt tctgaagcca
      241 caagacagaa gattcaggca tggaggcaaa tggttttgct gtggcagtta caaacccgtt
      301 accatatttc tcatcatgtg acttttcggt gcgttccttg ctggaagagg aggaggaggt
      361 gtgtgtctgc cctagatcca ggcctcgagc tcccttcagc gaggcacctt acgcatggaa
      421 taggaggttt cacccacctg aaaccttcta aatacaatat cagtggtgaa aaaccaaaaa
      481 caagagagaa aataaaacaa gatcattagt aagagttcaa caaagcaatt gcattttttt
      541 ggatatgtct taacacatgg gaatgaggat aatctgtctg taacaaggga gacatgcaga
      601 agggagaggg ttaatcgggc aattgcatac agcagg
//
LOCUS       KCPA01003754             632 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 413777tic ultra-conserved element locus
            uce-2869, sequence.
ACCESSION   KCPA01003754
VERSION     KCPA01003754.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 632)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 632)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..632
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="413777tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>632
                     /note="ultra-conserved element locus uce-2869"
BASE COUNT          170 a          146 c          128 g          188 t
ORIGIN      
        1 tttcctgctc tgccctccct aagaccattt agagggatgg ctgttctgcc aaaccagaga
       61 gcctcagaaa tgcctcttaa gggagaatca tgcacctgta aaatgaccta tgtgcagatg
      121 cccccaaagg tgatgagaag cactagcttt ctctggtgct ttgaagcagg ttcccaaaga
      181 gagatattta atcaaattta tgtttatttc aggcttaccc tctctagatc catccaacag
      241 ctctacaact tcttcttcag gtcctttgac aggcttttca gcaaacatac aaggagcacg
      301 ggtttacctt caagggccag cgcctgttgg gactcccagc tttaacagac agcatttttc
      361 accacatcct tggacaagcg caacaaattc atgtaggaac ttcatgggtc tgtcttagtt
      421 aactataaat tcatagctat ttagtagatt tctaacttga aatgcacaaa atgctttcca
      481 attgctttta gcagctgtga ggatggcgtg caaatcccaa gctgtgctat ttcgtccact
      541 agttctggtt gtaggctctg tgattacacc aagctaaaga ttccccttgt agtatgagtg
      601 caatattagg tgaaaatgtc atgtttgcca tg
//
LOCUS       KCPA01003755             793 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 413891tic ultra-conserved element locus
            uce-511, sequence.
ACCESSION   KCPA01003755
VERSION     KCPA01003755.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 793)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 793)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..793
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="413891tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>793
                     /note="ultra-conserved element locus uce-511"
BASE COUNT          245 a          158 c          160 g          230 t
ORIGIN      
        1 tgtatttcac atactttaat ttggctggca cataaaactc atttgacatt ttgcaggtat
       61 ttctttgaaa ggatatttgg ttcttgttga gcgttaaggt atggaggtgg ggtaacctgg
      121 gtaacagaag gtcatttccg agtagattgt tgtccaagat cagttcttcc aagtaactga
      181 atgttttcag tccttctagt gacctgcaaa cgacaaaggc aacaggaaaa atgatactcc
      241 actaaatcag ggaggccatg atgagctgaa ataaatattt taaccttccc tttcaggagt
      301 gggaatagtt ttggtttggg cctgtcagaa gagtgaatga caagcattag tggcaagggg
      361 agtgctggca ctgcaacaca tccttcacat gctggcagga tgaaggatgc gggtcactta
      421 gtgagtagcc aggatccaaa acaaaaggct tcagatatgg ggcctgcagg atgaatttgt
      481 caatgtcttg tgccttcagg cacccagcct cgcctgaccc taacctccat tcccaagata
      541 aataactctg tcacagttca ccttcattcc ctggacacaa atttaagttg tcatccatca
      601 tttctgccaa gaaatatcat accctgctaa caataataaa tacaacttca agtatcattt
      661 cttagtagtt accttaatag gaaatgtaga cattttttat taacctctta attaacttct
      721 tgagttcctg caaacaaaat aaaacagtct ctgcaaaata aaatgcagca ttacttcaga
      781 gagaaaagac att
//
LOCUS       KCPA01003756             504 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 413992tic ultra-conserved element locus
            uce-2968, sequence.
ACCESSION   KCPA01003756
VERSION     KCPA01003756.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 504)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 504)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="413992tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>504
                     /note="ultra-conserved element locus uce-2968"
BASE COUNT          117 a          151 c          116 g          120 t
ORIGIN      
        1 gggatgtgtc actggagcca agcagccccc aggaaagttc cattagggat gttctccaaa
       61 gcgtgacgga gccgggctgg ggtcaggctg gctctcagcc ttgcccagca agaagttggc
      121 tccttctttc ctctcccaac ccatgtttga ttaataaatc atgcagtttg cccaagactc
      181 cctctgtccc cacccaaata caaacattcc ccgtcaccac caccttgcga ctggcaaagc
      241 tgctccctct gacaatcaat taccctccgg agatgaaatt attgtttaat ggcttttgga
      301 acaggctcct gctctgacat tcatcacaat caataatgca tcagcgggga caaaagaaat
      361 tacctgcctc ctgctaagtg aaagagtcca tttgtattcc acgcggcccc ttcacgccca
      421 ctgagccggc tggatcgtgc tggcggcacg gagggcgcct gaactctgag aagttggctg
      481 caacttcatc accggtgctg cttt
//
LOCUS       KCPA01003757             677 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 414102tic ultra-conserved element locus
            uce-4871, sequence.
ACCESSION   KCPA01003757
VERSION     KCPA01003757.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 677)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 677)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..677
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="414102tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>677
                     /note="ultra-conserved element locus uce-4871"
BASE COUNT          134 a          146 c          228 g          169 t
ORIGIN      
        1 taagaaagat tcaaaaaaat ttgtcttcag tacaaaaagt cttgcgaaaa taaggctccc
       61 aaaatgctac aacgtgtcta gtgtatgtct agtgtactct gtgaaaggtt tgaattcaag
      121 tctgagttct cagagctgag ccctagttcc gtggcgcttg taccatggag gcctgccatg
      181 ccaggattgc tagcaagctg ggaaagcatt gcactctggt ccgggctggc aaagtgccct
      241 tgatccatgg ggttagcctg ggcagctacc agtcctggat gtggggagct ggtctgcggg
      301 gagacgtggt gtggagaagg ctgaggctgc atccgagggg atgggctgga atgaggtggc
      361 tgggactggg gccgcggtga gggtacaggc tgcggagaac gcacttgatt ggtgagcgat
      421 gaagggagct gctggccctg gaggtgcggg gactgggcct gattggggag catgtgttgt
      481 tgggggctca taggattggg ctgagctggg gaccccatct gctgctgaag cagcctttgc
      541 tggaaagcct gttgcaaact ggctcctgtc tctgcactca tggcctgtgg aagctggctt
      601 atttgtccca tgtttccttg ctgcatctgc tgcatgtgat gctgcattct ctgctgctgc
      661 tgctggggat acccaac
//
LOCUS       KCPA01003758             627 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 414212tic ultra-conserved element locus
            uce-487, sequence.
ACCESSION   KCPA01003758
VERSION     KCPA01003758.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 627)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 627)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="414212tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>627
                     /note="ultra-conserved element locus uce-487"
BASE COUNT          215 a          104 c          104 g          204 t
ORIGIN      
        1 agagaaggta gaatgaatgg tcttttttct agttaagttt aagtgctaac tagtatttca
       61 aacatttacc atgagatatc aaacagcatg tgctttctat ttatattggt taccaatctc
      121 aatattcaga ggaagagtgt ataaagttaa caagcaatta tttggcaaat tagtactcaa
      181 caaccctgag taaataggaa gtttgaaacc tatctgttat acagctactt taatttgcat
      241 agcacactgg tgtgtttgct ttgcaaatac tttgcaatga atcatcattt gtactataca
      301 gtccaaagaa aagcaatcaa aattcacagc aagacaatga aattaattat aactgttgaa
      361 ttctgtggtg gtaattcctc ctcatgcagg aagattaatt gcattgcact ttccttgcac
      421 tccactaaat gatctgatga atgtataatc atttacagat ttttcaaatg ctgaaaattg
      481 attacctttg attagctctg atctgcacaa agagctctga cagagtatca gtgaaacatt
      541 acaacattac agacaaagta acaaatgatt taattaccag tgtgcttatt aatgttagat
      601 tccctgcagt gatcctggca aatcagg
//
LOCUS       KCPA01003759             616 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 414321tic ultra-conserved element locus
            uce-2302, sequence.
ACCESSION   KCPA01003759
VERSION     KCPA01003759.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 616)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 616)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="414321tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>616
                     /note="ultra-conserved element locus uce-2302"
BASE COUNT          181 a          107 c          116 g          212 t
ORIGIN      
        1 tggggtttgg acgtaaatag atgttattta atttttttta caacactaaa attattccgt
       61 tttctttaag aacttacatc ccaggtctac atgggatttc tattcataaa tttgcctcct
      121 taggccaaag atcaaaaatt agtgatggtc cacaacatgc agagcttttg tcacattctt
      181 tcattttcgg cataagaaat gggcaacttg ttcagggcaa atacttgttt gaactgagga
      241 ttttattatt aatctctgaa gactgctgaa tttagggtca cagtaagggt tgattaggta
      301 caaggtgcac aaagctctcc tctgtcaatg ctattgaatg aagcaagtaa tttagattca
      361 gaattggtct tggattgaag ctcactccat taccgaccat tttcaatttc agctatacaa
      421 taaacatcaa gctcagcaag gaaattagta catttggtaa tgtattggga gagatgggtg
      481 ggtctctgac aagatgacac ttatcaccaa agcttcagtt aatgaaaccc ttgagtggtt
      541 tctgcgtttg acatattttg acattttttg aaatcacatc cagctttttt taccccacaa
      601 tgttgttctt tatgag
//
LOCUS       KCPA01003760             631 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 414430tic ultra-conserved element locus
            uce-5766, sequence.
ACCESSION   KCPA01003760
VERSION     KCPA01003760.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 631)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 631)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="414430tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>631
                     /note="ultra-conserved element locus uce-5766"
BASE COUNT          165 a          137 c          136 g          193 t
ORIGIN      
        1 caaggtccat ttgcagccat ataattgctg tcagctaatg cctgataaac cctgcctaaa
       61 ttgggatata tctattttat tatatatcta tatttactct gacaaaagtt ggacaaactt
      121 gtccaaaaga ctaggggtcc attttatgtg cttgggtgtc caagcacctg ccagctgttt
      181 gtcccttgaa ttgaggacat catgttttca atttccttca ataaagctat gaatctggca
      241 atttgctggc ctgcttcagc taaacagaaa ggacaatttg agaaagatca tagttcaggc
      301 tcagtcagac ggaaacgatt gaaaacagag agctggctgc tatgtttccc caatgcagct
      361 tgctgtcgca gtttgactga caaactgact tttttgaggt gctcatgccc atttcagtca
      421 gagtttattg aaggtgattt tgatcttctc catgaggcca cagcagcggc catgccatct
      481 gtcaccttga ttgcatcgtg gattctctgg agagagtgcg atggctcctg atcatttaca
      541 gattgtgctg ctttcgcctc cataaggacc acatgcacag agccagatgg tgaacataca
      601 cgcttattat aagtctttat ctctgtgcag g
//
LOCUS       KCPA01003761             694 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 414542tic ultra-conserved element locus
            uce-1816, sequence.
ACCESSION   KCPA01003761
VERSION     KCPA01003761.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 694)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 694)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..694
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="414542tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>694
                     /note="ultra-conserved element locus uce-1816"
BASE COUNT          164 a          194 c          142 g          194 t
ORIGIN      
        1 ttagaaacca gcaagctttt gtcaccaatt tctgcctcat tctcccctga gagccctcag
       61 agaggaaaca gggagcaaca aggtcctggt ccaaggggct ctccatcctc aaaatggatt
      121 ttacctgtct ctgaaagctg cctccatccc ccacagctct ctccctaggg aaatcaacct
      181 aaaaggggct aatggaacaa tgtccctttc tctccctctc attttctctc ttttttttat
      241 tagcatttgt ggaatttatt cccaaactct cctaatcttt cgtacacaac catttgattt
      301 gcataaccca gccccctctc ataaaaactg gctgctagtt taattaaaaa atgtaaattt
      361 gctgtcatct cggggcctag tgaattagga cgacatcggc attttttatt gctgaagacg
      421 tccaaattga tccagtccgc attgaaccag aggggaggag atggtgccgc gtgggacttt
      481 tggctggagg ttctgcccct cccctgcttc cagccaagcc tcctctgccc cctctttgct
      541 ttgcaaagtg aagctgagga tgaggacatt ggttctccca aacctcagct ggattggcta
      601 gcatggcctc tacaatatca gcacttctgg gagctgagcc ctgggtggca cctgagctct
      661 ccaaaccttg ggaatggcta catcttcaaa ccct
//
LOCUS       KCPA01003762             811 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 414652tic ultra-conserved element locus
            uce-5638, sequence.
ACCESSION   KCPA01003762
VERSION     KCPA01003762.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 811)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 811)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..811
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="414652tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>811
                     /note="ultra-conserved element locus uce-5638"
BASE COUNT          238 a          146 c          166 g          261 t
ORIGIN      
        1 aattgggagg gaggtggagt ggaatcacat ctcccaaatg tctgcatcag acaatgctat
       61 tgagtcatga aactactaga gcacaagaca cggtgtaact tcaatcacag ctttttagtt
      121 tattcaaatg aaggaccctc aaatggttta gttaggaatt aagttaattg ggtttggtgt
      181 aaggttggtc tacttcctgc tggaaagttt cccatatttc ctcagtataa gtagcggctg
      241 gactcccatg tcaccctgtt agcccagact ttaattagtt ctggcattcg cctcataatg
      301 ataaatgctg agatgatgaa tggaaatgca aatgagtgtg aagtggctca gccatcagtg
      361 ctgaatatca ttaatacctt cctactgtta aatcgatcaa tgtcatccca ggatccctct
      421 gttcagcggg tgcagatggc tgtccgccag aatgccttcc attatattgg cagtgaaaac
      481 tttgtgggtt tttcctcccc atatgctttt attcatcttt tgctgaatat ttgtttggca
      541 actagaactc taatatattt ccagctgaga tgataactat ttagggtcaa taagcgagta
      601 gctaatttag agcaaaataa atatgaatat ggatctcttc tcacatcagg agataaatat
      661 caagtgcata ttcaataaat tggagagcag tagaattttt cagggtgcaa aatttcatgt
      721 tgtagcaaca aaattattaa tttctcaggt gtgttgctct ttgtatttta caaggtttgt
      781 cagcatgtcc acagaactaa tttcataaga a
//
LOCUS       KCPA01003763             431 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 414759tic ultra-conserved element locus
            uce-4778, sequence.
ACCESSION   KCPA01003763
VERSION     KCPA01003763.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 431)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 431)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="414759tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>431
                     /note="ultra-conserved element locus uce-4778"
BASE COUNT          122 a          112 c           87 g          110 t
ORIGIN      
        1 ggcagagccg gggttcgcag ccgtggccgt gagccttaaa caaacttcca gcagcatttc
       61 cgcctgacat ttttctttat gtttcgtcag tcatatctga gcgatcagac agccgccaca
      121 cgtggtacac ccaccaggat tattatctcg agcagaggcc cagagctcat tgtagcaggc
      181 atgtaattct ttacaatgta tgccacgtta agtgtgttgg gttatctatt caacagctga
      241 ctgagccagc tctcctcaac aaccatgtaa gaagcgatga caattgtact acttcataag
      301 ggctgcatgc aactctgaca cacacttcac agcaaccagt catctatata aaccaatttc
      361 aagagcaaaa ttgcatggtg cctccactct gttataaaca caatgatatc cactcagagc
      421 tgataaatgc g
//
LOCUS       KCPA01003764             614 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 414868tic ultra-conserved element locus
            uce-7587, sequence.
ACCESSION   KCPA01003764
VERSION     KCPA01003764.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 614)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 614)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..614
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="414868tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>614
                     /note="ultra-conserved element locus uce-7587"
BASE COUNT          151 a          157 c          159 g          147 t
ORIGIN      
        1 tctctcccgt ggcttttttt ggaaaacggg gctgatggag tcagcatctc atgggcgagt
       61 cggcagcaga acatcgggct caggctgcac atgaagagca ggcgccgtgc agccttcccc
      121 tcagcaaata tttatgcttt aagctttctt gcttaaagtc ctaattggag tctaggtgag
      181 ctggcacact agaagagagc ctaatagaga cattgcagtg ctattagcac agatggttgt
      241 catatgtatg caaatgagga gcaaattgaa tttggtgtcc cctctcacca gctgtcctat
      301 cagcactggc tcctgcagca gcaaaaggca ctgccactgc tctgctaatc tgtcatcgca
      361 gattaattac aactaacaca ttaatcttca tttgtttccc catacaaagg aagcctgttc
      421 tttcaagtac actctgatgg gatgggtgct ccaacctggg aaaagaaaaa agaaaggaag
      481 gagggccagc cagcttcatt agtgccagcc ccgggggctg gggctgctgg agccttagcg
      541 gggctttcgt gctccttctg gcaaaccaga ccccactact gggagcctca gccacctgcc
      601 gggagctcct ggga
//
LOCUS       KCPA01003765             383 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 414970tic ultra-conserved element locus
            uce-2715, sequence.
ACCESSION   KCPA01003765
VERSION     KCPA01003765.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 383)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 383)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="414970tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>383
                     /note="ultra-conserved element locus uce-2715"
BASE COUNT          118 a           73 c           61 g          131 t
ORIGIN      
        1 cattacccca gcataaaaaa gtgagctggc aacagagatt tagctttaac tctgaatttc
       61 ctgggttttt caagctcaaa caagaccctt aatgttgctt taatgcagtt tttggtggta
      121 taattcttct taattctgtc cattgcagtc ctttgatact ttatgaatta cttatctcac
      181 attaataagg cttaacatgg agtattaacc tcctatacat tcctaattag tttttaatga
      241 attttagttt ccttgttaga aaaagagcta gctagctagc taccacaaat ttaatctcca
      301 ttactggagc ataagacaac cacccctggg gatgcatgtc cttgagattt tcaagaagct
      361 ttataaaaga gtcaaagaag ctt
//
LOCUS       KCPA01003766             385 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 415075tic ultra-conserved element locus
            uce-2154, sequence.
ACCESSION   KCPA01003766
VERSION     KCPA01003766.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 385)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 385)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="415075tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>385
                     /note="ultra-conserved element locus uce-2154"
BASE COUNT          131 a           77 c           53 g          124 t
ORIGIN      
        1 ttaactttct gctcatctgg cactgctttt cagctactgc tttaaacctc tgcatttgca
       61 ttctgctaac gctgatgcca ttacagtcac aaataaatta agctgattta ctccttctga
      121 attatgttat gtttattgat gcttgtataa tttaatttca cacaaattcc attaaagatt
      181 atgccctcta tcacaaaatg cttccagtgg ggaaatataa tcaggttata atagatttgt
      241 gtgttacatt aagatgacaa tagtctagta ggtccactgt aataataaaa cagaacacaa
      301 acaagggata aaatcaatgt cacacaagaa ccactgccta gctaaccagc agcttctatt
      361 atcatagatt aaataaaaac ctcac
//
LOCUS       KCPA01003767             678 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 415187tic ultra-conserved element locus
            uce-2387, sequence.
ACCESSION   KCPA01003767
VERSION     KCPA01003767.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 678)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 678)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..678
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="415187tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>678
                     /note="ultra-conserved element locus uce-2387"
BASE COUNT          211 a          131 c          127 g          209 t
ORIGIN      
        1 aagtcctggc acttctagat ggcaactacg caaagcttac tctgcctgaa tataacaagt
       61 atcacaagaa gtcttgtttg tattaccact ttctaaaatt aagaagaaag gtgtctgctt
      121 acctgaagga ggatttttgt cctacgaatt taccaatttc caaagcttct tgtgtcctct
      181 ggagtccata gtaacgtgaa ttgtctttat ccaagtacct agcaaatcat tgtcacatag
      241 cagcagtcga cctttctttt caatcttttc aggagttata aatcagttga ctttcaagct
      301 cgatgagatg gcatatgccc tggtttgaag aacagatgga ggcttggggg aaaattgttt
      361 ctgcaggctt actacaagca gcattgctcc ataaaagtga gccattcaca ctaatttctc
      421 acatacatta tacagaccat tcagcagctt tcatctagct ttcggaggtc atttagcaaa
      481 tttagattga agttatttct gacacatggc tgagttttca ttccatacac cttcaagaga
      541 aggcaaatta tatcaaataa aggaatggct ttaattgcgt attcagggga aacagtaaag
      601 taactgccac aaaattactg ttttctagaa tcttgggata agttgcaact attaattagc
      661 cacagaggag tcaataaa
//
LOCUS       KCPA01003768             612 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 415298tic ultra-conserved element locus
            uce-419, sequence.
ACCESSION   KCPA01003768
VERSION     KCPA01003768.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 612)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 612)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="415298tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>612
                     /note="ultra-conserved element locus uce-419"
BASE COUNT          171 a          128 c          115 g          198 t
ORIGIN      
        1 tatactgtta tccatattac gttgtttctt atagattttt taaaaaaaat gtgaaatttt
       61 tccacactat gtgtgttgtt tccatagctc ttcacttcct ccagaagcct ccttacatta
      121 aaaaagaagc cttacactta tcctgcaaat gacagaaagg gcttatttgc aggattttta
      181 gagcattaaa ataactatgt caggcagaag aatctttctt ctatcctagg atttcagcca
      241 tgcgcagtct ttcttccctt tctctccccc gtctctcttt ctagcctggg gcgtgaattt
      301 gcatgtctaa ttcatttact caccatattt gaattggcct gaacagatgt aaatcgggaa
      361 ggatgggaaa aactgaagtc atcaacaatg attaatcagc tgttgcaggc agtgtcttaa
      421 ggagactggt aggaggaagc atggaaacgg aaaggcagtg tatttgaagc ctaattgtca
      481 catcagagca tccttgtccc catgcaacca ccaccttgta catcacttcc tgttttatgc
      541 agctcaaaac atggactgaa gatttttaat atgttgactt tctttctggg caagacatcg
      601 gtcatgtgtg ca
//
LOCUS       KCPA01003769             753 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 415410tic ultra-conserved element locus
            uce-183, sequence.
ACCESSION   KCPA01003769
VERSION     KCPA01003769.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 753)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 753)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..753
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="415410tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>753
                     /note="ultra-conserved element locus uce-183"
BASE COUNT          244 a          141 c          140 g          228 t
ORIGIN      
        1 tttgaaagtg caattttcca tctgtcaatc agcccctcaa ggtccccagc caccaacccg
       61 ggaggctcga ggcgaggtca cccctgtctc ctgccttcca tttgatgggg cacccggcct
      121 cattaatcaa gatcctgctc aaagtttggg ttggggaggg tggctgcagg aatattttat
      181 cgtctttcgg gtgctatcga taatttatat tctgaattaa aataaatagt ctccttttaa
      241 atagaatttg attagatgac tacaaaatct atttctcttg ttatggtaca tagcagatca
      301 tttcctagag cctgcctcag aagaaaatgt gtggtatttc tggcattaat aatgtatggt
      361 caccaaaacc cattctggcc atagcttcga gatgcttcaa aatacagcca attaaggttt
      421 atttaattat taaggttgaa taaataacag cgaaacatgt taaaaatctt tcagtttcag
      481 tcaatcataa taaaaaatta atgagactgg atagagagcc ataaaaactg atagactgca
      541 atcgtgaatt ataaattggt attgattttt tcctttgcaa taacactctc aggtaatcgt
      601 atgttgccac atgtaaagtg cactttcctg gttgagacta atattaacta tcaaatatat
      661 atgagatgga ggcatttatg acacttcaga tttcacaaac aaaaagaaaa aaaacacaat
      721 ttgtggaata atagcggcgc tgaacacaga atc
//
LOCUS       KCPA01003770             363 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 415514tic ultra-conserved element locus
            uce-2818, sequence.
ACCESSION   KCPA01003770
VERSION     KCPA01003770.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 363)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 363)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="415514tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>363
                     /note="ultra-conserved element locus uce-2818"
BASE COUNT           90 a           76 c           89 g          108 t
ORIGIN      
        1 cccatgctcc caccgtggag ttgcagctgt gttcaccagt ccgtagtgtg tgatgatgaa
       61 attgttcatt gtgaatagaa tcaggattat aaactaattt ttaatagaag agaagaaaag
      121 tatatactta aaatgtattt atggctcaga tgtactgtaa ttcagattta ttgtaccgct
      181 tccttgattt ttaactatgc actgtaatga ggcacttgcc actcagcaaa tggggggtca
      241 gagcagtcac agagctgaca ttgcctcccc tgctggcaaa ccggggtgct cggtgcttgc
      301 cccggggtca cccactttgc tgtcgaagcc attccttgtt ggtgggtgat ggacagcttt
      361 gca
//
LOCUS       KCPA01003771             369 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 415620tic ultra-conserved element locus
            uce-1742, sequence.
ACCESSION   KCPA01003771
VERSION     KCPA01003771.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 369)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 369)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="415620tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>369
                     /note="ultra-conserved element locus uce-1742"
BASE COUNT          103 a           66 c           79 g          121 t
ORIGIN      
        1 tttaattttg aagcaagttg cattgcacct aattattttt tccatccctc ccgacattac
       61 cttaactgca gagctctgta gtttgcctgt catttttaat caggttgttt taggtaattt
      121 ttgttatgcc cctcattact gaattgttta tcaataggtg caccaagtgt cactagcttt
      181 tctcatcaag ccaggtctga caaagagctg cagtgcatgg gaaagaggca gctaggtgaa
      241 actaatgcca tagatgtttg attcattagg agcttattgt taacggggat gtctgattgt
      301 aaaggctcag tcaagcaaaa gagtgcagag taatcagtcg gatttatagt ttgcagggct
      361 caaaaaaaa
//
LOCUS       KCPA01003772             614 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 415729tic ultra-conserved element locus
            uce-1909, sequence.
ACCESSION   KCPA01003772
VERSION     KCPA01003772.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 614)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 614)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..614
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="415729tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>614
                     /note="ultra-conserved element locus uce-1909"
BASE COUNT          176 a          120 c          139 g          179 t
ORIGIN      
        1 aattcatttc atctcttttt caagcctgag tctttcatac ataacatcag gcatgtcata
       61 tctgaggaat tattaaaata agacggagcc tgctgcatct gagcagaaaa gcttctttga
      121 gctggcgtcc tcaggagaga agcaagctca atctcattag ttggtgctga gaaggcgtcc
      181 tagtcactag gttcaaggtg atgaaagatt agggcgtttg gcctcagctc attctgtatg
      241 cagctcacat cactccctgc ccgtgaacac gaaattacat tgaacctggg gagtctaact
      301 ccattaattt taaatggaag attaatttaa caatatgcgg cagatatttg ttacaaacct
      361 atcatgtaaa agtgacggtt agcaataaat tgtggtgact cacactggcc ggtggccctg
      421 gctcaaataa atcagaaggc atttacacat aattgctgtt tttaaagaca gggatatggg
      481 agatatgttt ctttgatgaa agattgggta actccattca aggaagcagc agcccgtgtt
      541 aaagcgacag catctctttt atgggagatg ttttccaggg cctgcaggac tggcatgcag
      601 ttattatctg tctt
//
LOCUS       KCPA01003773             425 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 415839tic ultra-conserved element locus
            uce-4025, sequence.
ACCESSION   KCPA01003773
VERSION     KCPA01003773.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 425)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 425)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="415839tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>425
                     /note="ultra-conserved element locus uce-4025"
BASE COUNT          146 a           65 c           89 g          125 t
ORIGIN      
        1 aaaaaaaatc agggtacggc ttattagttt tctcttcgct gcttcttata aaggtttatt
       61 tgacagagca taagatagtg gtaaaatcct aaggtaaagg ttaaactctg ttttattatg
      121 tttacaggat ttaaagggta aatcaggaag tgcttattta acatcaagtg aaagtggtgg
      181 attagtaacc agaccgagac ttaaaagcat ccttaatcct taagatctct gagggtgaaa
      241 ggtcactctt taacaccagg ttgtgtaaag aatgaagcag acagaagctt ctgtttcatc
      301 attgcccagt taatccactg aggaaatgag cagcattggt tttttgctag gtaaactcct
      361 cctaaaacca aggaaacaga ggaaagcctg aacaggaaat aattaaagta ggtttatttc
      421 atgaa
//
LOCUS       KCPA01003774            1094 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 415950tic ultra-conserved element locus
            uce-436, sequence.
ACCESSION   KCPA01003774
VERSION     KCPA01003774.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 1094)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1094)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1094
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="415950tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>1094
                     /note="ultra-conserved element locus uce-436"
BASE COUNT          358 a          198 c          165 g          373 t
ORIGIN      
        1 agcccttgtc tacatgcggc tccataacac atttgaaatg tgtaaggcat aaagactgag
       61 ggtttaaacc ctcagtttat cagctctaca ggcccaattt tgcaatcaac taaacctaca
      121 gtacattttc atcaagtgct gcaaatcagc aaaatattaa atgaatcttg aaaaaatgat
      181 tatgaatcca cagttctgtt tgactgtata attctattta agattaaaat tactatcata
      241 aaaaggccac tttctgaatg taattccaca aaaacatcat cacaaaagct tttactgcta
      301 tttatgtcag aatgtatttt aaacagttct aatcatttac ctttgtggac acttaattaa
      361 aattacaaaa ccaattttaa tctgtagtcc aattaatatg caaatatatg caaatgtggt
      421 aaatcaaggt ggtgattaag ttaaggacac tctatttcat gtctgcttta agtgtgaaaa
      481 caaacaatct tttttgtaat tgtactgatg gattgtgatg tttatagggt tagtatgggg
      541 tacaaatgtt tatgcatcaa cattatgcca aaacaaagat tttatactct ggagtgattt
      601 agcatccagc atacattcag atgtaacaaa gtcattttgc agtcatcttg tgaattagaa
      661 taaggtcaaa gcaaagttaa atttctatgt catccatttg tatggctatt taaaattcaa
      721 caatcacttt ctgatgtgtt aggtaagagc caagaagtct caagaatggc atattatcac
      781 cctttatcat ttagtgttca taatacactg gtttatcttt gataccatta cagaaatagt
      841 tctcccatta aggtgcaaag atattcatcc tttttaaccc tttatcctcc acaagttcca
      901 attcttgata aaggttgctc caccagcgag ggtttctcta cagatatgta tattcactaa
      961 gaattggcaa agatttttgc agacactttt caccccttcc tcactgctga tttagacaga
     1021 tgctccttcc catttgccta tagagaagtc tatccattgc tctttgtggg aataaatatg
     1081 aattcctcca ttta
//
LOCUS       KCPA01003775             781 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 416063tic ultra-conserved element locus
            uce-3959, sequence.
ACCESSION   KCPA01003775
VERSION     KCPA01003775.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 781)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 781)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..781
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="416063tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>781
                     /note="ultra-conserved element locus uce-3959"
BASE COUNT          258 a          117 c          139 g          267 t
ORIGIN      
        1 atcaacataa tgtattggta gttgcagggt ttataaataa aatgcttata catcctgaaa
       61 tgcaaatatt tattctgtgc atgtataatt ataatatgcc catgatagct gataattttc
      121 tgattctcta tagtctcatt taagtcatat ttattctctt gcattcatgg tattcattca
      181 acactggaca tcgtagtgag ctgtagtaca gggggttttt tggttttaac cttcaaagga
      241 atttagttga gcagatgcta cattgaacta gtcagagtag aaaggaaatt atatggcttt
      301 taaagggcac atctagcata tctgctgggc taaagtaatt ctggcaatgc ttcaaaggat
      361 ataacttttg atagtaaagt aggtaggcta cagaatgaaa tcacatatgg caagctgtca
      421 aagtcttcct acacattcag tacatttata taagtgcaaa tggatgctgc ttagatggag
      481 tccctagcaa tttcctctta aatctgctct aagattatct gatattattt aactaaatta
      541 tctgtaaaag cggaggacaa cttttatgat caaatattta gaaattagct ttttggcaga
      601 ttatctgaaa aatgaactgc aattgtatta acacttgaaa gcaaagggct ttcagtaata
      661 gcaattatat caaaacaggg ataatgaatt gctgtatatc aacttgaaga ggacgtattt
      721 ataggtcaat gatgtcaata gctatagttc acatagacac ctcatttctt acccttttat
      781 t
//
LOCUS       KCPA01003776             732 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 416174tic ultra-conserved element locus
            uce-853, sequence.
ACCESSION   KCPA01003776
VERSION     KCPA01003776.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 732)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 732)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="416174tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>732
                     /note="ultra-conserved element locus uce-853"
BASE COUNT          235 a          117 c          119 g          261 t
ORIGIN      
        1 taacaaacta aatttggaat tacttgtttt ctagctttaa atgcctgctt tatttctttt
       61 tcaagagatg cctaaaatgt tttttatata aaaatgaacc caagcctgtt ttaagatttt
      121 ttgtgtaaga ctttaaaagt tgtattaata acttctggtt gttaaataat ataaaagtta
      181 acaaactaaa ctgttacatg aatcatggtt agtatccact aatgatgtta atggaaaaaa
      241 atgctttaga acaataaatg gattttaaac tatcctttaa gcttgatctt gctaaacaca
      301 aactctgatt gacttgtttg tattagcatg tctctcgtga gaatgtaatg gagtttaaag
      361 aggtaagatt accacttacc actgttagac tgtctaaatg ctagttcttc aacctttgag
      421 tttccccgca cattaaatat cccattaagc attgcataga ttcacctatt tgttttcact
      481 cagaagagtg cgttgactgc atttttcgta gtatataaca atttgtcttg ataaacaaat
      541 catcagtgtc actgcccagc tgttggtact caacttcaaa aactttattt gtaattttca
      601 gtgctaaata tcaccgccct tgaaggcagt ttagagggct gatatttctt ttgagactat
      661 cagacttgat ggctgatgat tattaaggaa atatgtcgca ggactcaaag gatgactaaa
      721 cgttaaacag gt
//
LOCUS       KCPA01003777             650 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 416281tic ultra-conserved element locus
            uce-181, sequence.
ACCESSION   KCPA01003777
VERSION     KCPA01003777.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 650)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 650)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..650
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="416281tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>650
                     /note="ultra-conserved element locus uce-181"
BASE COUNT          175 a          140 c          160 g          175 t
ORIGIN      
        1 tttttccagc cattccatca gtggacagta attctctagc tgcaatgggt ggcagtgcct
       61 actctgaaga gcgtctgagg ttctggcatg ctggggtcac catttaccag gtgaagttgc
      121 tgtccaggtt gcctggtgct tccctgttag aatgtgtgcc agacccacgg cacccctgtg
      181 tttcatgaat ggaattcaaa aagacactta tatttccata aataaattag gaattcagtg
      241 gcttcttacg gctaatcagg gcaggctgat aaaccttgct agctgtttaa taaatgaatt
      301 gtgactgatt acctattaat atggacgcct caggaattca ccctggggga agcagagcag
      361 tgaaatagag aggggcatgg ccccctggga aatcagggct tcatgtttgc agcttaaata
      421 tctctgtgaa gtatcaataa ggaggtaatt gaattttgaa cacaaacatg agcgccggat
      481 ggatgaagga gaggggggcc ctgatcatct cttcatgccc cttcatactc ccctcccctt
      541 ccccttagag accactctag tgaagataga tgctaaatcc attaaataaa gattagactg
      601 tgtcgtggta gaaaatggca gcttagctag atccctgggc aaattgggac
//
LOCUS       KCPA01003778             618 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 416390tic ultra-conserved element locus
            uce-1484, sequence.
ACCESSION   KCPA01003778
VERSION     KCPA01003778.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 618)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 618)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..618
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="416390tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>618
                     /note="ultra-conserved element locus uce-1484"
BASE COUNT          185 a          130 c          108 g          195 t
ORIGIN      
        1 cataggatat gacacatgtc tgcaaaccat aactgaagtc cagacttccc agtctgggta
       61 tgaaaaggtg atttgagtga gttactgaaa aatatttcat caatatccta cttttacatt
      121 ctgaggcact gaaatgtaat tatgagaaat aaaataagga ttttcttagt tacaattcct
      181 ggcctttcac tgattgcagt aaattataaa ttatgcagtc aatgtaggcc aacaaaagaa
      241 gacatcttca aatctcagtc aaaggtaatt acttaagtcg gctgaatgtt cccttttcat
      301 agagtgtgat ctctctttga cagctcacac tgacagatga ccttctcagc gactttctta
      361 tccttcggat catgagcagt gtgcctctct ccctgaatat ctctatatat ttgtgacact
      421 aagctttcaa atacagctat tgacaaatca gaacatcagt ctaagtgctg gtcttcctat
      481 cactcacaat aaagtagcta tcacttgtgg tgttgtagag caagcacatc tctgaaaaat
      541 gagttctcac caagtgctaa tttgacacag ctcgcttgcc ttcccataat tgctctgtca
      601 ttgtcagttg gcagttcg
//
LOCUS       KCPA01003779             515 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 416498tic ultra-conserved element locus
            uce-2579, sequence.
ACCESSION   KCPA01003779
VERSION     KCPA01003779.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 515)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 515)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="416498tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>515
                     /note="ultra-conserved element locus uce-2579"
BASE COUNT          169 a           96 c           85 g          165 t
ORIGIN      
        1 caggcatagc cctgaacttc cctttctgac ctgagcaatg ttgggagcat ggcatgggaa
       61 tgatggggaa gagagaatat gacacagaaa ggaatatatg tttcaacatt ttgtgaagct
      121 taagcatgaa ggtctagaca taatgctcat atcagaaata ccacctgcat ctaactttct
      181 ctgaaatttt tgtttataat tccagtttga aatcaagaac atctacaacc ccaagcatca
      241 atgcccttca atatctaatt tcacagtttt cttaacacat atctcatgtt atttattata
      301 gtcagtgtca tgccaacacc tttgtctgtt cttgctacat tttaaatggc ttagctggca
      361 agccatcaat cataaatcat gagacatatt ttaacttcaa ctaagatcag tttagaaaga
      421 aaacaagtct tctatggctt aaatgtgtac attactcaca tctataagtg ataaatgcct
      481 gttctgaaaa gagagtttgg ttatatatct ataga
//
LOCUS       KCPA01003780             378 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 416602tic ultra-conserved element locus
            uce-2395, sequence.
ACCESSION   KCPA01003780
VERSION     KCPA01003780.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 378)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 378)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="416602tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>378
                     /note="ultra-conserved element locus uce-2395"
BASE COUNT          131 a           65 c           44 g          138 t
ORIGIN      
        1 aatatcttgt aaacctatac tagttttcaa tgtgtctagt agcacctacc tggttctctc
       61 aaactaccat attatattaa catattattg catttttcca cagatgggta tggagtgaac
      121 tgtaaaaaca agcatgcaat cacatcaatg cagacttatt tctttaaaat gtcatactgt
      181 atatgattta ttatgttaac actcaaccac atcatattat ttatgtctgt atattttgaa
      241 aaaaagtgtt gctttgattg acgtcacctt ttttcttaga aattaacaag ataaatgctt
      301 caacaaaaac aattaaaata ctctaatatt gtccttaaaa ggtttatatt cttctgataa
      361 ataatctgtc acagcacc
//
LOCUS       KCPA01003781             895 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 416717tic ultra-conserved element locus
            uce-255, sequence.
ACCESSION   KCPA01003781
VERSION     KCPA01003781.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 895)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 895)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..895
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="416717tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>895
                     /note="ultra-conserved element locus uce-255"
BASE COUNT          296 a          172 c          173 g          254 t
ORIGIN      
        1 aagactccaa atattgattt taattggaat gaagtgctgc aacattatgc ataaagcttt
       61 agtgaagtgg caatttacct aaggggttta ctgattgaaa agctctcaaa cctgaaatca
      121 ctagagaggt agaaagaagg gactctctgg ggtggggtgg agggtagcct ggtaaaacaa
      181 atccctctca aatctgaagc agatgttagt gtagagggaa gtcaattcag caaggtacaa
      241 tcagctttac aaaaattatt ctgttaaaag agaacgggct cttgaaagag ctaagtgtgt
      301 ttctgttcat ttgctgtact aaggaatctt caaggagact ggtgttgcaa ttacaactaa
      361 tcctccccaa aaaattaact gtgttgaagg ctttgtaatt tccctaggta caatttagct
      421 gtcacttact ttaaaattta ctcaaacatg cgttccgaac agcactaact tcacatgtca
      481 agtgctttcc agccaattga gtctaaactg gaagtcggtg ttaaacaact gaatgattag
      541 acaagatagc tcatttccct gctcttttgt tcagaataaa atgccacatt tacattatca
      601 gactcaacag gattttctga cagagggaga aaaaacccta gtgaacactg tccatagcaa
      661 gcacatgaag cctgtcattt accaatcatc cttcaaaaag caatagccat gaatgtaact
      721 taattacgac ccaatgatcc ttgacgaaaa atcatcttat cactgtcctg tccccatagg
      781 gcaaatgaga cacttttgtc ctttggcact gatgatgcta aattcctaat tgcaataatg
      841 gagtaagaga gccaaacatt tttcattgca actaaggagt tttaataaag ccgct
//
LOCUS       KCPA01003782             779 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 416826tic ultra-conserved element locus
            uce-3897, sequence.
ACCESSION   KCPA01003782
VERSION     KCPA01003782.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 779)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 779)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..779
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="416826tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>779
                     /note="ultra-conserved element locus uce-3897"
BASE COUNT          258 a          167 c          119 g          235 t
ORIGIN      
        1 tagaagagaa attttattta cctattcagt gctacaggag cagaatatac ttacctcagt
       61 attctgaaac acagcttcaa atgaaacagt ccacagctgc tgatgagtta gctgagtttt
      121 taaaggcggt atagtagttt aggtaaacaa gcatctgctt actctgaagt gcaaagacct
      181 tgttttgctt gctaggtgtg atccagacat tgccagtaca aaccaatcca cattgcccta
      241 ccgttcacct caaccttgac ctggagatta aactcacttt tattgcacac aaaggtcatc
      301 tgtgttaggt caaaattcaa agtcccttgt cagccaaggt tgatatattc caacctttcc
      361 tactctaatg catcaaattt ttcatggtga ggtcatattc agcagacagt gtattcagca
      421 atttatcgtg ccattgtaat atagcacaga atatgattgt ccaaaaaaca atgcatgaat
      481 aaaatatttt ccattctgat gtagcaaatc ccttacactc ataaaactcg aacctagact
      541 tgtttgcagg cttcagaaga gtgatacact ttctaaaata caatcaagta ttgccataat
      601 attccttaaa cacaagcaac atgaatataa tggtatccta aaatccacaa gtcaattaaa
      661 aagcacatat ggtcagtgta aaaacttcta cttcatcctt ccttaacaac caccataatc
      721 ttgcccttaa atctacagac atctgttggt ctatctgatg acactaagct tactttaga
//
LOCUS       KCPA01003783             331 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 417040tic ultra-conserved element locus
            uce-2384, sequence.
ACCESSION   KCPA01003783
VERSION     KCPA01003783.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 331)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 331)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="417040tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>331
                     /note="ultra-conserved element locus uce-2384"
BASE COUNT           89 a           74 c           70 g           98 t
ORIGIN      
        1 cagggcagga cctcccgggg tgacagagcc agagaggtca ccccgggaac atgctgggct
       61 ccctctcctc agctcttgta atggcattag caatgactgt ttcttactca atcatactcc
      121 caaaggattt tcaataaact ttttatgtgc cataactgtt acattaaata aagctgaaag
      181 tattgagtaa actgactgta aatcacttta gatgccttgg aattacatta agtgtgagaa
      241 ttatggatct tttgctgctt gcagaaacag agacgacaga gccagaaatt tttatgctcc
      301 ctttccttgt gtcctcctgt cagtggcctg t
//
LOCUS       KCPA01003784             816 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 417151tic ultra-conserved element locus
            uce-52, sequence.
ACCESSION   KCPA01003784
VERSION     KCPA01003784.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 816)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 816)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..816
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="417151tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>816
                     /note="ultra-conserved element locus uce-52"
BASE COUNT          243 a          154 c          173 g          246 t
ORIGIN      
        1 cctctcctgg actggacatg ggcaaagcta aaccaactgg gaatgcctcc acagaagtgc
       61 tggtgactct tgctgcagat attctagaaa tgttatgtta tccatctgct atcttaataa
      121 catcaaatcg tttaggtgca aaacatatga aaagttgtga gtgcaagaaa cagtcccaaa
      181 gtaccttaat cctcctatcg atagcaccac tattgggtta cacggttcta atcccagagg
      241 agttgttgcc tgacattaag ctgtccaaat agtatttata tctgctgctg ccctgcaaga
      301 tcacttaacc ctgcacagca gtttaaaagt agttaatgac agacccagca tgacttgccc
      361 cttatgaatg atcacataag ttcgacctgt gctgtcatgg tttatggagg aaggcagttt
      421 gtccatagcc tgcttcagcc acagcaggta atttgaaatg aaatgagaca gtttctacaa
      481 gcagattgat ttgggaatct tgcctgttct tccctttgac ccttgacaag ttgacactac
      541 aaagattgtg actttaaaaa atgattgggt gcaaatacat ttaggtagat gatttactat
      601 gtgttaaagc aaggacagtg catttagaat ggagctgtga gggaaggtaa ttgtaaactt
      661 taacaactcg tgttttatgt ttctgtatct tattaattgt ctgagtaggt gaatcttctg
      721 atagcaggag accaagtact gtatctaata aactgtgggt gagagtccac agactctgca
      781 taccagtatt cagtatttta gtatgtagaa ataagt
//
LOCUS       KCPA01003785             691 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 417260tic ultra-conserved element locus
            uce-7004, sequence.
ACCESSION   KCPA01003785
VERSION     KCPA01003785.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 691)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 691)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..691
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="417260tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>691
                     /note="ultra-conserved element locus uce-7004"
BASE COUNT          204 a          128 c          124 g          235 t
ORIGIN      
        1 gtgcttgaaa agtcagcaag taaggaagat aggatcatat tctgacactc agaatatttg
       61 gaagtttcag ctgctgtact ttctgaatgt atgttttcct tagctttgga gttgccattc
      121 tgaattgagt actaaaataa atacagtttt actgccagca gagacaacgg aagaaaagac
      181 aatacagcaa catggcaact ttcaatcact tcctgacttg ttaatgaacc ctttttctaa
      241 ctgagacttt gcttttgagc gagggtgttt tccccaagcc attttataca atgagatggt
      301 aacagttgtt tatcggataa agcacgtact acttagaaca cagatgtttg attattattt
      361 atttctctct gaagcctgct aattcagtcc caaatgatct ttttttttct ttctgcttaa
      421 atttaatttg gaatgtatgt tgttggtaag tgacagatag tttaattatt aataggatcc
      481 cgcaatgcaa tgcaccatag ttttaaaatc atctggggcc aaaacaacac tacttccttc
      541 cttccttatg cttctgggat tcctcgaaga atgcaaaggt aattacaaaa ctcatgacaa
      601 atctgcatgt attatgtcct ttcctcaaca tttgtgcttg cctatggttt tacaaagtgc
      661 cgctcttact atgaaatggc aatgaatcag g
//
LOCUS       KCPA01003786             666 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 417367tic ultra-conserved element locus
            uce-2385, sequence.
ACCESSION   KCPA01003786
VERSION     KCPA01003786.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 666)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 666)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="417367tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>666
                     /note="ultra-conserved element locus uce-2385"
BASE COUNT          156 a          135 c          127 g          248 t
ORIGIN      
        1 ttcaacaaac attttcattc atgtttgtgc tttgctgtta agatctgtat atggtggtga
       61 tgccgaaatg taacctttaa attctgcaca gctgtagttg taccctttct tccccagtgt
      121 acctcctctc cttactcatt caaatgtacc ttttattcct aaatctctct cttgattgtg
      181 gcacagtcct aatgtgcacc tgatttgatg agatttcaac tcctgtcctt ctgtgtgttt
      241 tcgcagccat gcccggttac gctgtatgtg cgcctgcaac aggtgtacat tttgcatctg
      301 tcagaacttc ctcaactcag acttgctgca atctgtaaag aacaaactct tcactgcagt
      361 tcttaacagg tccttaactt tatttactag gtaccaggtg tgctaagggt gtcagaaagc
      421 aattggtaac catatactgc aggtttttca cccatatcct ctaaataggc cgatagtttt
      481 ttagaattat caaacttggt ttaacttgag tttagttcag tcatttttct gatttggttg
      541 ttgattcagg ctcttgtgat tgcagaaata ctgtgcagga atttggtgtt tttagggaac
      601 tgagtgtcta caaatctgtg taatgtttca cattacaggt ttatttagtg gtagtgcctt
      661 ttagat
//
LOCUS       KCPA01003787             647 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 417475tic ultra-conserved element locus
            uce-7183, sequence.
ACCESSION   KCPA01003787
VERSION     KCPA01003787.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 647)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 647)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..647
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="417475tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>647
                     /note="ultra-conserved element locus uce-7183"
BASE COUNT          188 a          103 c          118 g          238 t
ORIGIN      
        1 cattcactaa aatcaaatga tatgttcttt ctgtttgttt ctttaattgg gttgcctttt
       61 agtctttggt agaagtttca ctgtatatta agtgtatcac actgtatact gtattggcat
      121 gtgcgtgtgg tatatacaga attagcactt gagatcagac tggagaaaat atacacatgt
      181 gtgttgtatg ttctgcaaat ggcacactat acagacctaa ttaaaaactc acattttttt
      241 cctattgcag ttgaatgcac atttgtcaga atgtattaat gccccaagta cctgtagttt
      301 taagcgttat ggctgcactt ttcaggtcag tatataacaa ttatacttcc caattgatga
      361 aagtctttga catgaaagtt ctggacttct ctagtttcag ttaagaaatc atccagttgc
      421 accaagtaca ggagatgttt gattttgcat tttaaaaatc aacaacatgg aaagcccaca
      481 cattcctgca gtggtttgcg agttcagtta ttaggtgtat cttgttgaaa taggaatatg
      541 acacatttga agaacttgtt aacttaggat aagaggaaag tctctttagt tcttcagtaa
      601 cttcagttgt ttctataaag tatgtttata ttttctctca tttgcgt
//
LOCUS       KCPA01003788             574 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 417586tic ultra-conserved element locus
            uce-2656, sequence.
ACCESSION   KCPA01003788
VERSION     KCPA01003788.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 574)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 574)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..574
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="417586tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>574
                     /note="ultra-conserved element locus uce-2656"
BASE COUNT          186 a          102 c           93 g          193 t
ORIGIN      
        1 tcattcttaa ttagaaatga gtaatgacat accttatata agattttgtt cccaacttca
       61 aaaggagcta cctaggtttc cttggtgtct ttactttgaa gaaaatgtct tttattactt
      121 attttagtac aacacattaa aatcaaatat ctcctgtagc aaaacgattc aagtctctgg
      181 aactcaaata attttctaat aaaaaatgca tgagacaaat aaatgcactt tatgttccac
      241 aagaaaaggc agtttcaaca ggctaatgct cagagaaaat tcattttatc aaccagccat
      301 ttcattcttt ggtgctgtta caagctcccc gcggttgcta agcaaccata attcatcgta
      361 ccttttaatg gatactctgc tactgctgag aacattaagg tgaagagaat aaatgccttg
      421 ggtgaatctt gaaatctttc attatgcatg tcattctatt tctgtaatgc tataatgctg
      481 aaatgtttct gtggcaggaa actgagttgt ggtaattgca tattccactc atatatgttt
      541 tgtaagcaaa gcagcacgta cttgtctaaa atga
//
LOCUS       KCPA01003789             508 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 417693tic ultra-conserved element locus
            uce-4170, sequence.
ACCESSION   KCPA01003789
VERSION     KCPA01003789.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 508)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 508)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="417693tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>508
                     /note="ultra-conserved element locus uce-4170"
BASE COUNT          164 a           89 c           91 g          164 t
ORIGIN      
        1 tgcagcatcg tatctttcaa gacagttcat aaaaacacgt gtctttcatt catcacatat
       61 atgcagttgc atcctatata ttgttattat ccataaacat ttctcttcgt ccatttctca
      121 gctgcaatgt gctatagaca aatgccagca gtacattata gaagatatga ctaatctaga
      181 gaatttccat ttgaaagaga aatgagtaat aattgattgg cctagatcca aagtcacagt
      241 ggggttcaaa aagcttgtaa gtgccctcat aaaaatagaa gctgtatcaa ccaattgaat
      301 ttaattatat gtgaaggtga tgagggagct aaacagcctg taattggagt ccaattactc
      361 agctggtctt ccataaaatt aattcatctg aaagtttgcc attgtcccat gctcgaggcc
      421 tgctgctggt ttaattagct aatacagagg aatcttgaaa cattacatta ttttgtcttt
      481 attgccaatt atgggttaag gaaaattg
//
LOCUS       KCPA01003790             748 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 417792tic ultra-conserved element locus
            uce-6887, sequence.
ACCESSION   KCPA01003790
VERSION     KCPA01003790.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 748)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 748)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..748
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="417792tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>748
                     /note="ultra-conserved element locus uce-6887"
BASE COUNT          222 a          151 c          146 g          229 t
ORIGIN      
        1 atgctcaaat atttagaaga gtccttttgt ttatttttcc tctctccagt gggctgtttg
       61 cttgagtcaa gactgccaga tttggtccca tggaacatga tctaaataaa ctgcaggaag
      121 tgaacgaaag aaatcttgta ttgttccctc attgcttgaa ttgcctgaac tgcattcagg
      181 tagcctgacc tctgcaaaca tctgttaaca tgcacggggc tcgcctccct ccagtttgca
      241 aacctgatat taaaagcata aatattctgc aagtaagttt ccaccttaaa taaattaaat
      301 tgtgttgcag cagtagctaa ggtggtcaat gcaattaaat tcaaaacctg aatgtattga
      361 actttctgca attatacatg ggtcatctct ggacaatatg ttggccatct ggtagcatct
      421 gtgctgttcc cactaataga gttcctgctg tggctccagg ccatgacagg cagcactaag
      481 caggtcacat gttgtgtctt tcagccatat ttaggtcaca gttttggggg atgcaggaat
      541 aatctcattg cacaaaggca atgaaaatga ataacccctc tcaggtattt tgagcattac
      601 aaaaagttaa aggaatagtt ttcaggattt taccccagga ttaagagcaa attattgcat
      661 ttaaaactgc aaagctaaca cagatatgtc ttctctcatc ttttaaataa ggctctcaca
      721 acatagtttg ttggcctgca agaataag
//
LOCUS       KCPA01003791             575 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 417897tic ultra-conserved element locus
            uce-3338, sequence.
ACCESSION   KCPA01003791
VERSION     KCPA01003791.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 575)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 575)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="417897tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>575
                     /note="ultra-conserved element locus uce-3338"
BASE COUNT          179 a          113 c          104 g          179 t
ORIGIN      
        1 aagtatttat aagctttcct cccacacaat ttccatatgc ccttatttac acctctctca
       61 aggcgaccac agttaaataa tctgtcacag aaagactgta aacaaaaagt tctggttatt
      121 ataatatttc tgcatttata ttccatcaca tcagtattaa aggctttcag ttacagtgct
      181 tctggggata aaaagctaaa atgcctttgc tcacaggtgc attaaatcct attaaagaat
      241 cttccttata gcacatacct cattactgca tacaaaggct taaaatgaag gtgaagtgta
      301 caaagtaaga tttgatatta ctcggtgtgc atatgctgaa gtcattaggt tttacagtgt
      361 actcgaatga tagtaggttt catattccta ttgagttgct tccagcagtc aatgcttctg
      421 ggtcaagtag tctgacatgg ggtgatgtgt ctcaatacag gggatgagca aacttctcta
      481 agcagcttta cacaatgaca agtgcacttc cctccatagc tttattatgc aatataagca
      541 tcaggtcata gaacagtcca cagtgtgggg atcaa
//
LOCUS       KCPA01003792             562 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 418006tic ultra-conserved element locus
            uce-2796, sequence.
ACCESSION   KCPA01003792
VERSION     KCPA01003792.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 562)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 562)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="418006tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>562
                     /note="ultra-conserved element locus uce-2796"
BASE COUNT          164 a          113 c           94 g          191 t
ORIGIN      
        1 tgctgctttg tccaccctct atctgtttat ctgttaccat cacagtggta acgtgcagta
       61 tcaattggat tttaaaagac atagatctct tatactagct gtcctttttt ataatacctt
      121 ttacaaattt aatcaatgcg ttttaatata caatatagtt taagtgcaat atacgataaa
      181 tattcaagct tcatcttaaa cgtgctctag cctttaaatt gttaaaactg cagtgccctt
      241 tcaatctact tacataatgt cataaaatat acatttcaag gtaaatgaag tcagctactt
      301 caatttagtc cctcaaactg gtagtaaatg agaggttaac actatggtgc caaacccatt
      361 attgagtaaa tttagcacct tggacagctc tgtaaaatct ttattgcttt cctgacctgc
      421 tcgtcatgtt ctgtctatgt gttcagtggc tctcagctct gattgaaagg caatatatta
      481 gatcccgaac acaaacatgc tcgggggctg cttcactgtg agcgtaatga catggaggtg
      541 agaacaattt tctggtcacc gc
//
LOCUS       KCPA01003793             677 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 418114tic ultra-conserved element locus
            uce-5244, sequence.
ACCESSION   KCPA01003793
VERSION     KCPA01003793.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 677)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 677)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..677
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="418114tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>677
                     /note="ultra-conserved element locus uce-5244"
BASE COUNT          180 a          174 c          154 g          169 t
ORIGIN      
        1 ccttatagct agagtgggaa cagtgaataa gattacagaa tagagagagc aagatcacca
       61 tatgggcaga ccatacctga atggtggatg ttattaaaac aggctccaag tctttacctt
      121 accaccttac ttctgccatt ccactgctgc ccactttgct ttacctctgc tgcctgtctg
      181 cctgactcat gaaatgctaa acaattttga tatttacctg tttgtgatta aattgcaaaa
      241 tgatccgttt agttctgttc taaattaagg tctacattaa atgtcatagc atttatcttt
      301 cataaaacga gacagcaagg acactaattt cccaggcact caatcactgc ccgtgccacc
      361 ggagagaatg gctgtggagg cgcgtgcccg ccattcacag ccggcttgac agcacccagg
      421 cagaatcata aaagtcaatt aatcattaaa agctgttacc agcccgtatt gagctgctgt
      481 ggcacaaaat gttaatcagc cccacatcaa taccataaat tcctgcaaat tggagcagtc
      541 gataacgccg aggcccggca ggtcgatggg agggcgcaag gcctctccgc caacatggtg
      601 gctgggcagc cgccctgtcc tgtgctggcc cgctggggct gagcaggtgc cgatgcatca
      661 ctgcccctga tgggtct
//
LOCUS       KCPA01003794             315 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 418220tic ultra-conserved element locus
            uce-7892, sequence.
ACCESSION   KCPA01003794
VERSION     KCPA01003794.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 315)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 315)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="418220tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>315
                     /note="ultra-conserved element locus uce-7892"
BASE COUNT          110 a           62 c           87 g           56 t
ORIGIN      
        1 aggaagagta cctaaataat cagatgtaaa ggtcatccac ttgggaaccg gtgaactgtc
       61 ggacccaaga gtaaagcagc cagaaagaat aataaaaggt aacagattca gcattgtcca
      121 aaagttccag accagtgatt aatgtgtgag ataatggact tgggaaatga gtaaacactc
      181 ccgtgctccc tgctttgtgc ttgaatgact tgatgacaag ggcagagcaa ggtgagaatt
      241 taaacagggc tacaggaaaa gagacaaagc cctgcgacag cagcccaggc gggagcccga
      301 aaggagcgca cggag
//
LOCUS       KCPA01003795             576 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 418328tic ultra-conserved element locus
            uce-7897, sequence.
ACCESSION   KCPA01003795
VERSION     KCPA01003795.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 576)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 576)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="418328tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>576
                     /note="ultra-conserved element locus uce-7897"
BASE COUNT          162 a          108 c          119 g          187 t
ORIGIN      
        1 agtaatggat ttcatgataa attttttgct atagcaagtg gaagtaggat cagcagaagg
       61 cagctatacc ataatcactt tgagctcaat aaggagatct ttaccggcaa ctttgttcct
      121 atttcttaac gggattaaga agctcagctc tttaaattct tgcatataac actgacattt
      181 cgagggtgtg tttggaccaa ggagttcaaa gaggaaaagc caatatgact ttgtttttta
      241 ccttgctgca ggagcagttt gtgcaaatcg cctataagct tattgacctg aatctttgac
      301 tccttgtttt ctctggattt ggctggagtg tagacactga tagagcactg atagaggtga
      361 ttgcacagcc ctcggctttg cttggcacca gtgacattat ctttccctgg cagtcatatt
      421 ccttttaatt cattgcattt tatttatgta gactttctga ctaaatgaag gatacattgg
      481 taatcagaga cagaggataa ctagaatatg cataagaact cacagtactc cttccaataa
      541 tgcaattgtg tgcgtgattc tcatattccc cagagc
//
LOCUS       KCPA01003796             334 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 418435tic ultra-conserved element locus
            uce-950, sequence.
ACCESSION   KCPA01003796
VERSION     KCPA01003796.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 334)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 334)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="418435tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>334
                     /note="ultra-conserved element locus uce-950"
BASE COUNT          129 a           53 c           68 g           84 t
ORIGIN      
        1 aaaaaaaaaa aaaaaggcag aaacaaaggc aagcagatgg ctaaagatga aggtcacatc
       61 agattgagaa gtttgtcaaa atgtgatgac ataggtaatc tgtaaactgt tattgcacct
      121 agctggaggt gctgaaaaac attttgaaat tacaaaaaac actggagtca ccagcacaca
      181 ggcaggaatg atagcctgga gtggttctgc tcgaatgcca gatgtggaaa gcgacatatc
      241 tggaattaat gatattaaac atgcttttct tttatgctca ataataactc tattatgatt
      301 gatacaaacc gcagacactt tatctagtac aaat
//
LOCUS       KCPA01003797             598 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 418542tic ultra-conserved element locus
            uce-3186, sequence.
ACCESSION   KCPA01003797
VERSION     KCPA01003797.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 598)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 598)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..598
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="418542tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>598
                     /note="ultra-conserved element locus uce-3186"
BASE COUNT          158 a          122 c          163 g          155 t
ORIGIN      
        1 atcacgtaag ctcagcattg ggccaggctg ctgcaggagt gggacaaagg actgatgcta
       61 cagtccggtt tccatggcaa cagaggagtg gtagtgagac cagaaatatt gcaaacaccc
      121 cttcttctca ctgcagccca acgcactgta ttgcaaaaga cagtgctgtg gagagtgggc
      181 aggaagagtc caaatgtctt taccttccag gctgcagagt ttccaaaata aaaagaaatg
      241 gcaaaaggga aaggaaacgc gccacgcagg ccccgttttc tgcgtgtaaa acgcgtgtgt
      301 tctttaaaag gcagtggttg gctgcttatc cggacatgat gtggttgaag ctgtcatcgt
      361 aatggaaatt cattgctgta gctatggtaa attgagtttt ctgcctgtgc tgaatgcatt
      421 agtctaatga gatgtttgca gctggagagc tgagctgctg gagacttaca ctgtgctaaa
      481 agacagggag aagatggctt ttgcttcctt gtgactgtgc tgaaagtctt ctgtttgggt
      541 cccaatgccc aggctctcta aagattctgc tcagtgtctt agcctaagca ataggtaa
//
LOCUS       KCPA01003798             431 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 418644tic ultra-conserved element locus
            uce-6717, sequence.
ACCESSION   KCPA01003798
VERSION     KCPA01003798.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 431)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 431)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="418644tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>431
                     /note="ultra-conserved element locus uce-6717"
BASE COUNT          134 a           74 c           83 g          140 t
ORIGIN      
        1 tgtgagattt cctttcttaa tggcaaagtt ttccagcaat aaatcacaat tcagtccatg
       61 ccattagttt ggggggcatt atatcccctc attaaagtgc ataaacaatt atatttattg
      121 aaggtaatgt actgtgtagt gcattataac gacactcatt aacatatgta atcatcattt
      181 gaatgggctt tactacaatg taaactgata atggcatgat tacccactgg gttattaact
      241 tttcagtcct aagataataa aaggtgatac aagaaacaaa aagcacatgt gcattgccct
      301 tcacatgtga tttatgtgct tcactgtgga gctatgaaca caggtaccca tcattgggga
      361 gactggctct ttattgcaca ttgtatttga cagaataata aatgtagctg aatggttctt
      421 gggtgggcat c
//
LOCUS       KCPA01003799             833 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 418756tic ultra-conserved element locus
            uce-1970, sequence.
ACCESSION   KCPA01003799
VERSION     KCPA01003799.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 833)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 833)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..833
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="418756tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>833
                     /note="ultra-conserved element locus uce-1970"
BASE COUNT          279 a          136 c          153 g          265 t
ORIGIN      
        1 ttgcatccgt gatgcatttg tgtgactcca tatacagttt tttcttttac atcacaacat
       61 gcccaagtgc tctgtaggca tcaaagcagg caagaataac acaggaccct ctaggtagca
      121 gggtaagcag aagcagcaag ctattaagat cttcctgtta tttcattgat gattttgtag
      181 gtatcatctt ctaatctcat taaaaagact gaatgtgcat ttgaatattt ctgaggagca
      241 aattgctgag caaaatatat atataatcct aacattttgg taggaatagg gtgagttatt
      301 attgattcac agagcacgac aaaacatcac tgcatgaatt agcaaacagc tgtttctaat
      361 ttgagtttag aactgtacac agaggaactt gttttagtgt tcactccttt catttataat
      421 gaattttaat taccgctaca ggtgagaaaa atgtagaaac aagcttgtat cttgtggaag
      481 aaacaaagga gagacagatg ctaacagatt tacagtctgt gataaaagga atgttttggt
      541 acactttaca tgtaattaga gtgcagctgt tttcagtccc aagtccatga tgcacagcag
      601 aatatagtat ctgctgcttt tccaaaggga gtaaagaaaa acagtgattc aactctgaaa
      661 gcatttagtt tattcctaga tctaacataa aactttctcc tctagcccta ttatgccatt
      721 tatcgaagtg tgaaataact tatttaatga tatgttaatt gttaccagca aaatacagac
      781 tgtttgacat aaggaaatat aatgttaaaa attgtcatct gctcagaatt atg
//
LOCUS       KCPA01003800             721 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 418865tic ultra-conserved element locus
            uce-2998, sequence.
ACCESSION   KCPA01003800
VERSION     KCPA01003800.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 721)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 721)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="418865tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>721
                     /note="ultra-conserved element locus uce-2998"
BASE COUNT          202 a          147 c          142 g          230 t
ORIGIN      
        1 gcttataact ccataaattg tgttaagttt tttatggtaa ttgctaaact ccataatcgc
       61 tatttttctt ggaaaggaag agaaaggggg gatttcatat gtctcagatc tgttggtcta
      121 ttctccaaat gacaggttcc tgactgatca actatgccac ctgctactaa agctcagtaa
      181 tattagtctg tgcaatggct tcactctcat ctcacacctc agagatcttg agctcaaccc
      241 caggcatccc ctgtgtgttt aaatcagctt aacggctcat acagtgtgct gatttccttg
      301 tgggcctctg ttttctcaaa aagtgatcac cttttgccaa tgccctcagg attaaacagg
      361 gcagtctggt tttccttttc tgcattggct atacctttgt agtcaataaa agactaacta
      421 gaaaagaatc agctgatgag agaatcaatc ttctggaagc ctccccacag ttttctcatc
      481 atttttgtgc cgtctgtcat ctcagattgt aaaatggaaa ccaaaactca gtatgtggga
      541 agacttttag tgctccttgt taacaaaaac agtaagacca ggggttttga tcttacgagt
      601 gtataggtaa acagtaagct gtaagtgtgc actcttgaag tagcttttcc atgtttctaa
      661 tggaggtctg cgaaaaatta tcaaagaagt atcacaaagg tctcatgaca tactgtagtg
      721 t
//
LOCUS       KCPA01003801             486 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 418971tic ultra-conserved element locus
            uce-5214, sequence.
ACCESSION   KCPA01003801
VERSION     KCPA01003801.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 486)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 486)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="418971tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>486
                     /note="ultra-conserved element locus uce-5214"
BASE COUNT          163 a           64 c          100 g          159 t
ORIGIN      
        1 gaaagaaact ttatgggcac aaagtcttat aaaagtttaa actcagattt tttaaaaggc
       61 aataaagaaa acttcctaga gctctgctaa actgcagatt tatttacaat aaatgtatag
      121 agtcttacat atactgtaag ttaatgacta atattttaac tttggttggt taatgtttgc
      181 agggcactta cagatgctag aataatctct aatgtttttg ctcaatctgc tctggagatg
      241 gatgaaataa atagtttaaa ctaattaatg taacaccagc tgttacaagt gcttggcaga
      301 cgtctgtgag ttttgatggg cagagagcgg ctgttgtact tgactttatt ttagtacaat
      361 gttgatcaca gtgtaagctg gaataaatga cgagccaaag gaaggaacag aggatgaatt
      421 ctgtgtaatg caaaataaat attgcccttt tcctgaaaat attttttgag gtcgagggag
      481 atttat
//
LOCUS       KCPA01003802             498 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 419080tic ultra-conserved element locus
            uce-7421, sequence.
ACCESSION   KCPA01003802
VERSION     KCPA01003802.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 498)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 498)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="419080tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>498
                     /note="ultra-conserved element locus uce-7421"
BASE COUNT          160 a           92 c          110 g          136 t
ORIGIN      
        1 ctccttccag cagctggagc atacacagga gcaccatcta atctgtagct agccagaagc
       61 agcaacttta tctaaacttg gacagcacaa gattaatgct taaacttgct tgcaggagtt
      121 gaaaaccggt ttctgttgcc attagttggt tggaagggaa aacagagttg ccgttatttt
      181 tggatatgca aaacagtttt gattttattt cttgcaaact ataggactcc aagccccctg
      241 atacttgatc agaactacat aaacaccaaa aatcaagtaa tcaaagcaga aaggagggta
      301 ctgaaggagt tgggattttg tgttcatgtc aagcatcctc ataaggtgag ttctcaataa
      361 taatgtaatt gtaattctta ctctaccttg gtggcatcac tgggagctgt ggagaaacag
      421 aatgacctgt tctgccagag cactaaaagt cacgtggctg gtttgaaaac agtgcaaaag
      481 tagtgaaata aagaattg
//
LOCUS       KCPA01003803             696 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 419192tic ultra-conserved element locus
            uce-5176, sequence.
ACCESSION   KCPA01003803
VERSION     KCPA01003803.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 696)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 696)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..696
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="419192tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>696
                     /note="ultra-conserved element locus uce-5176"
BASE COUNT          198 a          152 c          136 g          210 t
ORIGIN      
        1 cagaactctg gctcttaggg gataaatgtg gggctctccc agttttagag gctgaatatg
       61 ctctaacttt gcacaaagcc cggcccgagg aacaaagcct gtggcccacc accgggaagt
      121 ggtattagtc ctctccgcag ccctcccact gtggatgcat gctcaattcc cagataaatg
      181 cgccttttaa actatattaa tgtaaaagtt ttatttgaaa gatgccagct gtggtcctag
      241 cccaggttta ttcatgtggg acatttactg ggtcaactta atacttgact actgcttatt
      301 atcccatcag tcttcgggga caacccatga tctaattgcc cggcatttat gttgccctgg
      361 caactataaa tacagagtaa taatccttaa aggggcagtg tagaatttca tgcccctgca
      421 gtgaactaca cttcatttcc cagagcaccc tgtgtttttt aattcagtga ataaaaatgt
      481 gtaatgaata attaattatg tgcttggagg cacaatagct gcctactttt gaatattcat
      541 cagtgacatt attaattcac tagaaatccc aaggagcagt gggataggct tttagcctag
      601 ctggaggact tacagataat actctgcaac atgaacaaac tttttcaccc agacttttct
      661 ttctcagagt tagatttaat ttacatctta ataaaa
//
LOCUS       KCPA01003804             623 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 419300tic ultra-conserved element locus
            uce-3913, sequence.
ACCESSION   KCPA01003804
VERSION     KCPA01003804.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 623)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 623)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..623
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="419300tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>623
                     /note="ultra-conserved element locus uce-3913"
BASE COUNT          215 a          111 c          119 g          178 t
ORIGIN      
        1 aatcccttaa attgggaaac tgaaggaagt cccaaaaggc agcaaagttt tctatcaact
       61 caactgaaaa tgagttagcg aaccagacga caaagttcca cttgacctaa actttcagca
      121 acaatgaaag ctgtgtactc acattataga ttatgccctt acgcacaata ttctgtatgg
      181 aagatactgt cacattgtaa aagacctaga tcaacttaaa aaaataaaac ccaatagaat
      241 gattacagcc gctgcataga atgacaagta ttatcaacaa aaattaatca ggcgcatctt
      301 ttagtgaact caattaataa tgtgcaacaa cagggtctct tttcttaaga tgaaaattaa
      361 ttagtggagg gaaggtcact tggagatgct gacatcactc atcagaatgc tctggcagct
      421 ctaattattt gtcttccagg cttgggtgat cagaaattat tgcaatacct gagcaacatt
      481 ttgaaaaagc tttgtgcatg gctcttttaa ttagacctgg tatttgatta atgcagtgga
      541 agcatttaga tcagcctctt atcattgagt gacttagaag ttttagggta ttatagtgtg
      601 caagacaggg tcactacagt aga
//
LOCUS       KCPA01003805             617 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 419413tic ultra-conserved element locus
            uce-6593, sequence.
ACCESSION   KCPA01003805
VERSION     KCPA01003805.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 617)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 617)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..617
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="419413tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>617
                     /note="ultra-conserved element locus uce-6593"
BASE COUNT          183 a          117 c          113 g          204 t
ORIGIN      
        1 atctgtgtgc attatcctca gtaaatatta cttttacatt tggatctctg ctcatttccc
       61 ttatgacccc tgacagtctt ctcctagggt ctgattataa gtcactatgt actggagtct
      121 cgtaaggctt cgattaatcc accgcacctt agcattgctg tgactataaa aggaaaagtt
      181 atgattctga ataagcatca gaaagaagca aaagcataaa gtattaaact ttcatccagc
      241 accataggag agatgtagtt attaaatttc agctgcttat caaactgata tgaaagtcat
      301 tttgcatgat tgctttgcat cctcgaatct tctgctttta tttgcagtgc atctctgtgc
      361 tttcttatta gaaaaatact caaaggataa aaaagctgat aatattattc agttttgaca
      421 attaggtaga aacattttaa gaagcgcttt ttttattgca gctagtaata atagtggtgg
      481 tcctcctggt agcactctct tctgatgcta cccagggtga tgctagcttt accctataat
      541 ggccaaagcc ctgatggtta tactggtaaa gctgctaagg agtgtgagcc aggatgtcat
      601 tcaatatcac aaacaat
//
LOCUS       KCPA01003806             516 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 419516tic ultra-conserved element locus
            uce-213, sequence.
ACCESSION   KCPA01003806
VERSION     KCPA01003806.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 516)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 516)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="419516tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>516
                     /note="ultra-conserved element locus uce-213"
BASE COUNT          167 a          104 c           93 g          152 t
ORIGIN      
        1 aataactctc ctgtgcgctg tacattgtaa ttgtcagact gcaatttaca gtaatcctcc
       61 aatgcaaaaa cttaaatagc tgcagctgat ttgaaattca tacaaccagt tgaaagagag
      121 aaaaacaaga tgcacgggtt aaaaggccaa attgtgcaag tgtgtgcgct gagtgacaga
      181 cattttagta ctagcctggg accatatttt aaaaggtcac tgaaaacttt tggcttgggc
      241 cctctgacaa acaatgaact ttccatatat ttatttgcca tctctttgtt tttacagcaa
      301 gcagaataaa tgagttaaat gacgttgtgc gggtctgcac attgtcagca caggttataa
      361 gtcattatta aactccatca aatcagacca aacccggtct aggcaatgag actaaaagtt
      421 atttgcattc cttctgtcat aaaaaatcat atccccttac ccaagacttt cgtttcttta
      481 ttaaatgcag ccacaagagt atttcaggtc tggcaa
//
LOCUS       KCPA01003807             356 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 419623tic ultra-conserved element locus
            uce-7076, sequence.
ACCESSION   KCPA01003807
VERSION     KCPA01003807.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 356)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 356)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="419623tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>356
                     /note="ultra-conserved element locus uce-7076"
BASE COUNT          149 a           53 c           67 g           87 t
ORIGIN      
        1 ttaagtcttt aacaaaagtt agcagaaaga aaaacaacct attgattttc ttttgggaaa
       61 atgtattttt gtatatccaa acagaaaggg taagcagaga aaaactgcga aataattaaa
      121 agccaaagat tagaaaataa ccttaagtaa gaggaagagg ttgttgagac agcttagcag
      181 agacaaaagg cactgaagaa cagaatcatc catattctca cactgtaaaa taaggtagat
      241 aaaaagccaa ttaatctttg cactgtattt tgaaaaacat attttaggga aaactgaact
      301 gtggatgcag ccactgaaca cagcaagcca tgcttgcatg aagccactta tagaaa
//
LOCUS       KCPA01003808             803 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 419733tic ultra-conserved element locus
            uce-5016, sequence.
ACCESSION   KCPA01003808
VERSION     KCPA01003808.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 803)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 803)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..803
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="419733tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>803
                     /note="ultra-conserved element locus uce-5016"
BASE COUNT          264 a          147 c          138 g          254 t
ORIGIN      
        1 atatatgttt gaacattata atcaatcaaa atacctattt gaaggagaac acaaacattt
       61 gaaatgaact tgaagaagtg taattctaga acacaggtta gtgatgtctg aaatgaaaat
      121 ataaactgat ggaaatgcac atcaaagcca gacaattata ccttttctct gtttaaatat
      181 acatctgata ttgattatta gcaggaaaaa catgaggggc ttctgtttat gtagtggggc
      241 tgatggcagc ctttacttgt tactatcctt aaaagctgga gaatgagttt ttgcaatgtg
      301 actgcaatgg taatgggaaa catggctctg ttctctgatg ctgagttgtg attgaaggca
      361 ctgacctgcc atagacttat aataggggag caggtgtggc aatgatggac tttaatttcc
      421 tttaataaac cttttatgtg ccacactttt actgccattc tatgctctcc aaggtcctgc
      481 acataatagg ttcattactt ttgattacta tagtctattg agacaaacaa ctccagaaca
      541 cactatatat tatgttcagt taaaccaata tagactattt atccactgtg cattatttca
      601 cctgcaactc tacagacaaa attaacaaca gctcctgtaa gctaaaacta ttaaaaccac
      661 tggtactcct ttgtcatcat ttcataataa ataccacacc aatcacagtg ttgctctttt
      721 aattatgaaa caaaaagtgc ccactgcctc tactgaacag cagttacttt ggtctaaaca
      781 gcaggttgca ttgtgatgaa tat
//
LOCUS       KCPA01003809             779 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 419841tic ultra-conserved element locus
            uce-7393, sequence.
ACCESSION   KCPA01003809
VERSION     KCPA01003809.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 779)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 779)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..779
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="419841tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>779
                     /note="ultra-conserved element locus uce-7393"
BASE COUNT          239 a          160 c          121 g          259 t
ORIGIN      
        1 aaatcattca tggacaatgt gctttcccag tttccagatt ttataaacct cacacctgtt
       61 tttcttaggt ttttgtgcaa cgtcagccta taaatcctcc tgtatttccc agtgtagttt
      121 cttatgaaat aaaacttttt tccctccatt tgctcaactg ttttcaatac ttgcagtcaa
      181 gcctgaagtt gtcaatcaag gaacagctta tcagtctgag cttttccttt tcaagcttat
      241 actcagtgac ttttgagacc tgtcaacacc cagttgattt tagccttaac aataaagtca
      301 cactctatct cccacctagt agctttagat taaattctga tgtcatatac gtcatattta
      361 catagttaaa actcataaca aagcaaccca caggcaatag gatgtaataa ccatgcaaca
      421 gagccatttc ctgtcccctt ttttctctca cactatgttt cgtgtagttt attggatgtg
      481 aatgttttga aaatgaaaat cgtctgggag aaaactgcta gccaggcgtg aggtttagaa
      541 gaattcaact aaaagaatat atggagttgt aaatgcatgg ccacctctgg tattgtaaaa
      601 tagaaactct ttcaatattc ctttcatttc cacaagaaga atagatggga ggccacaatt
      661 atgtgctcca gcagtcgact tttaatatct ttaattctgc tcatattaaa ggaaaacaat
      721 taacttggag tcagaaagcc ttaaacacca aaagttttac agttttcatt ttaaagcac
//
LOCUS       KCPA01003810             537 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 419951tic ultra-conserved element locus
            uce-3564, sequence.
ACCESSION   KCPA01003810
VERSION     KCPA01003810.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 537)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 537)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="419951tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>537
                     /note="ultra-conserved element locus uce-3564"
BASE COUNT          155 a           87 c          112 g          183 t
ORIGIN      
        1 ctttcattta ttttattgat gatgtagctg aaaacagctt cgtggggaaa gggcagtgag
       61 actctttgtt ctcgcctgag tgatatgatg cactaggtct tcatcggagg agtgcagaat
      121 aaaagaagat ttatgttcaa atcacatgct ttaaatattt ctgctaagtg ctagtttgct
      181 ctttggtgtt tagcctgaaa tttaaagcac tgaggattaa aaggattaca acataatctt
      241 aaataatcct aagtgtcatt tacagagaga tggttgtaat aactaaataa aaccatgtta
      301 agggatggca gcgttgtcag tcagcaactg gaacagaaac agtgcctgtg tcactttgtt
      361 gatctcctct tgccagctta gtttgatatt gggtttgatg tgagttatca aatagcttaa
      421 tgggctgttt ttcagtcagt actgatatgt ctgttgaaac accagtaact aggctaattt
      481 gcaggccaat attccatatt tcctacttct agtaaacttt tcaactggat cttattc
//
LOCUS       KCPA01003811             553 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 420062tic ultra-conserved element locus
            uce-1246, sequence.
ACCESSION   KCPA01003811
VERSION     KCPA01003811.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 553)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 553)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..553
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="420062tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>553
                     /note="ultra-conserved element locus uce-1246"
BASE COUNT          173 a          104 c           86 g          190 t
ORIGIN      
        1 tcctattaca tctagagact tctttttgtt attcaaatac atgaataaaa tgtatatgat
       61 tttaatgcct taaaccagaa agctaccttg attcccatta aaattggaat atttaatgtt
      121 tttgcttctt ctttggcact gtttttgata ttgtgaagaa gaacaaaaaa aatttctgag
      181 aacatataaa acaaaaaact gtgtttgaag tattataata aaacaacctt cttcttttaa
      241 tgctaagtcc ctttttaatg aagatcctct ggcagctctt gaatgtataa ctagtttata
      301 tcatgggatg aagctgtctg ttctgatgat tgacatgagc ccacattaca atgtgattct
      361 gaaaattagt ccatagaggt ccttttcagg tactactcag actgagagct gccctccaac
      421 tacagtagag cctttttaac cccactcatt ggtattctaa tctggaagtg ctgtcctgct
      481 ttttaaataa cccaggcatt caggctagta ccccccttga cacattactt agccaaagga
      541 ttcaaatgag att
//
LOCUS       KCPA01003812             685 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 420174tic ultra-conserved element locus
            uce-1154, sequence.
ACCESSION   KCPA01003812
VERSION     KCPA01003812.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 685)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 685)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="420174tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>685
                     /note="ultra-conserved element locus uce-1154"
BASE COUNT          197 a          173 c          135 g          180 t
ORIGIN      
        1 aacttgtagg gaaactgaga catcaaccca tgctgtacct tcttctaatg aatctaggaa
       61 gacaaaaact gccaagaact tccagaatct cttttcactc agcactcctt aagaaaggaa
      121 ggacaggttg ctctgcagaa ggacagaaag ggctgctcct ttaaggcctc tcctggatgc
      181 cctttcccgt tgagatgact atcctcaact ccctcctcat ctccctccct taagagttcc
      241 tctcctggcc ctgacagtaa ggtatttctg tcccacagat tataactcac tctgggctat
      301 tattcaactc ccaagccctg gccctgctgc atttagtcca aacataatat ccttcatgca
      361 tatattatct gtctccctat tatctggaat catttcggaa ttaaatttca gtcccgcaat
      421 attggcttga agagcggctc gctttatggg ctagtcaaag gttagaatac caatcaaaat
      481 aacactgccg atgcagagag acattttaat attccaaaac ccggtaattg taaaaggaca
      541 taatattttt tccctgatta ccccaaaggc aacacatgtt aacaaggcga gggagagagt
      601 gaaagaaatt tcagagttcg ctgcacgaca gatttaaagg agaagtcgtg gatggctgct
      661 gcgctccagc cccgaccagg agggc
//
LOCUS       KCPA01003813             313 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 420367tic ultra-conserved element locus
            uce-4238, sequence.
ACCESSION   KCPA01003813
VERSION     KCPA01003813.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 313)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 313)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="420367tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>313
                     /note="ultra-conserved element locus uce-4238"
BASE COUNT          106 a           60 c           59 g           88 t
ORIGIN      
        1 atgataaaag ttttttatgg aaatttctca cagcaagaca atcaatcata tttccaacac
       61 attcactgtc tcgagcctct gagcctcaaa gacttttttt ctatggagct tacttgttaa
      121 tttaacaatg atcaaaggct aaaacattta tcatgcttat tagtgaataa acctagcagc
      181 aggtatccca agtgaggaag caaatcctca tttcctgcaa gaatgaactg gaaattatcc
      241 aaaacatttt tcaggagtga cgagctgtca aaaggaggca actggcagct gtggcagctc
      301 taggaggaat gaa
//
LOCUS       KCPA01003814             571 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 420471tic ultra-conserved element locus
            uce-7126, sequence.
ACCESSION   KCPA01003814
VERSION     KCPA01003814.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 571)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 571)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..571
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="420471tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>571
                     /note="ultra-conserved element locus uce-7126"
BASE COUNT          187 a          110 c          110 g          164 t
ORIGIN      
        1 tttaagttaa cagcccattc tgaaaaagag atttaatatt ccttaacatt tttcttctca
       61 aaacaaatga aattagcaac agtagagatt agttttttct gtgcaaacta ccaacagcac
      121 ctttcacatg cagggatttt gccgtctttg attagcgctg agctcttgga aggcatacat
      181 tttattccca tcaccaaagc tccctatata ttagctactt acagagaaaa tgggcagggt
      241 gaaccccact gtgtagagga cagtggatgt gatggtactg tcatggaacg gatacttgat
      301 gctgtcatca ttacagaaaa agcctctctg atacggtttt attttggcca agtttagaac
      361 accaaggggt aagccagctg ttgggggaag gaaaacaaca aaaacaagaa atacatgtgg
      421 ttaaataatt tctaatcatg catggaggaa gctaccaaat ttcctaagta tcatgcaagg
      481 caccaaattc tgtttctttc aagactattt cagaaagatt cccaggttcc catcaggtac
      541 tacaaagttc aaagtcttta cataaggtga a
//
LOCUS       KCPA01003815             535 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 420683tic ultra-conserved element locus
            uce-6366, sequence.
ACCESSION   KCPA01003815
VERSION     KCPA01003815.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 535)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 535)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="420683tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>535
                     /note="ultra-conserved element locus uce-6366"
BASE COUNT          140 a          138 c          138 g          119 t
ORIGIN      
        1 ccctggagcc ctgcactgcc cggacagccg ggctggggga ggaaacccac cctccagcag
       61 tgccggcaaa gccagtctga cccgagcaaa tgaaaataat caaaagtaat tagaagcgtg
      121 ctggactgct cctcagagat ctgtgtgaga gaataaacat gccggagccc tccgagccac
      181 tgcaaaggcc catgtctgag ctgttaggtg ccctgacctt gtccacataa agacgtgatt
      241 tatgaagtgc agggcacagc agcagggctt ctgtcttctc caggagaacc aaattactga
      301 ggtggagatt aacatgcttt cagttgggcc catttccaga ccaagggaaa tttcttattt
      361 acatttttta ccttttctcc tcctctccct cacttttggc tgggagggat gagccgaggg
      421 caggaggggc agcagggaca gggcaccgac gtccactcct tcataagaaa aaaattatct
      481 gaccccctga aatcagcagt gttttcactg gaagttgata tccgaggaat tgaca
//
LOCUS       KCPA01003816             723 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 420792tic ultra-conserved element locus
            uce-4515, sequence.
ACCESSION   KCPA01003816
VERSION     KCPA01003816.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 723)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 723)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..723
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="420792tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>723
                     /note="ultra-conserved element locus uce-4515"
BASE COUNT          226 a          127 c          127 g          243 t
ORIGIN      
        1 attatattac cttctagctg gaaagccact tcctttaaag atctgatatc agaagcctgc
       61 ttggagccta acgcacatct aattatctct ctcagtctta attatttagc aagtgctaat
      121 aaactgcaca tatcatgaca ctcatgtgta ataagcatat aaatttaatt taactctctt
      181 tgaagactaa cagacatgga attcaatcac aaggcaatgg cattatagcc tccaatataa
      241 catgaggttt taataagcct cctgtttgct gcacacatgt gcttaagact gcctggaaac
      301 caaatcagta gaaaaaaggg attactttag attactttga aatgtgcatt gtttgaaatg
      361 gcctctggtg accagctttc atgaatggct gattttactt gtggggcatg tcatctggct
      421 caattatacc aggctccttt gtatgacaag tgcgcgtgtt gaaatatgaa attctaaaac
      481 aaagtaaatc aaatggtgag taggtaactg tatattatta gaagtttgta acttagcagc
      541 gggcattctt cttactgggg aattttcttt cgaaacttcc acagatttga agttaatata
      601 aaaacattac ttttaatctt cttgttcagc tatataaggt agatcatttc tcctacactg
      661 gtatattttt aaaatgttac tggagtttgt tgtttcaccc taacagatga agtgttagaa
      721 act
//
LOCUS       KCPA01003817             711 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 420901tic ultra-conserved element locus
            uce-4324, sequence.
ACCESSION   KCPA01003817
VERSION     KCPA01003817.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 711)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 711)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..711
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="420901tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>711
                     /note="ultra-conserved element locus uce-4324"
BASE COUNT          229 a          101 c          156 g          225 t
ORIGIN      
        1 ttatcaccat tggtaaattt actgtcaaag tgattataat gtgaacattt aaatgtgttg
       61 cagaggagct gtggtttgct tacttaatag ctgggtagct tgcgagatct gaaaatagga
      121 attgctacca attttaaatg tgtagttcca tcttaaagaa tgttcccaca aatttctgag
      181 caaataaaaa tattcaaaac tacagtacta gagagtgtat ccttgtggtg aatgttaaac
      241 tgtcagcagg attttcaggt catttgacaa aaaggataca ggtgctgtag ctagcagtga
      301 aggtgactgc tggtttcatc aatcactttg cctttcttta agttgataca taatggaccc
      361 cttcaatcag cttccttgtt ctttgtcact tgtttaggaa gaagaaagaa gagggtggaa
      421 gggctggact ttaaagtcaa ggttataaaa tgaatcgtta cttatttaca caggataaag
      481 aggataagtc agagtgagaa ggggctcttc ataaaatgtc gggtttgtca atgggtgata
      541 atatgtagtt tgaagctttg tacagacctt gaacagtgac agtagttgtc aaagcagtga
      601 ttctgaacca gaatttaaaa taagacattg tttagtgaca aaacgtgcta atcagtgttc
      661 acattatttt cagagtatca cagtaaatgg tgatccaata acaaagtttg t
//
LOCUS       KCPA01003818             489 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 421008tic ultra-conserved element locus
            uce-4254, sequence.
ACCESSION   KCPA01003818
VERSION     KCPA01003818.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 489)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 489)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="421008tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>489
                     /note="ultra-conserved element locus uce-4254"
BASE COUNT          189 a           82 c           69 g          149 t
ORIGIN      
        1 atttaaatag caagtcactt tgatattata cttcaaaagt aaactaattt agtcaactaa
       61 tcttgtttat ttcctaaata ttgttagttt ctatcagtcc gatgaacact tacataacaa
      121 gcattaaaaa gatacattta gcagctacaa ctgttaacaa aggctacaga atccagaggt
      181 tattgcattc tcccaaaagt acttaaataa tagcctaaaa tctgaagaat tactttaata
      241 cttcaataaa aataacccaa ttcaaaacat tttcaaggaa acatagctcc ttgctctagg
      301 ctaccgaata atggctgaaa gaaagtatat agcttgtcac ttctgattag agaactgtgc
      361 ctctgtgctt tgaatgagag gcatgtctgg taataggaag tgcagatatt aaatttaata
      421 aaataacatg gaatacgata tatatgaaac ttgaccaagt atagcacaaa atgtaacata
      481 cattaccct
//
LOCUS       KCPA01003819             658 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 421117tic ultra-conserved element locus
            uce-7530, sequence.
ACCESSION   KCPA01003819
VERSION     KCPA01003819.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 658)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 658)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..658
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="421117tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>658
                     /note="ultra-conserved element locus uce-7530"
BASE COUNT          206 a          125 c          120 g          207 t
ORIGIN      
        1 tttgtgttat aaccatttta acatattcaa atcaaaggtt ttttggtttt gaagatgtga
       61 ttgccaatta tttttgcact agtgcacata aacaggaagg acagattctt aggtatgagt
      121 tatatattcc tgtacaaaat aattgtatat tctatgaaga gtgattcttt ttctagagaa
      181 atatacaaca acacaaggga aatcttgtac cagcagcata actgaagtgg caagacacaa
      241 tattagaaaa acagagctac tttcattact gtgatgctgt gtgtcagaat gtctctcctt
      301 aatgaacctg tttgcaataa gactccgggt gcaaagaggc tatttagaga gcctattgtg
      361 tctgtagtga gtctttcaaa tatcttccta ccattagaca tgccgcattg accaattctg
      421 tcctgattgc tgttcttttt agtatcaagg gacattcttg cccagacaga ccgatggatc
      481 agaaactgca cttcataaaa tgtttacact gtacacacat tcacacagtg atacaagcaa
      541 cagagtccca gatcacacag catgttgaat gtgccagtgt catctctagg cttatgactt
      601 tccaatatct acaaaaggat ttgggttaaa ctgctgcttg cctgtcactc taacaaaa
//
LOCUS       KCPA01003820             779 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 421232tic ultra-conserved element locus
            uce-389, sequence.
ACCESSION   KCPA01003820
VERSION     KCPA01003820.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 779)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 779)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..779
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="421232tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>779
                     /note="ultra-conserved element locus uce-389"
BASE COUNT          222 a          148 c          171 g          238 t
ORIGIN      
        1 tcctcgcagt ttgggattaa acacaatcaa agtgaggagt tgttttgcat gaatcgcata
       61 ctggacagca tttctatggc tgctttccaa aggcagaatt ttctagtctc attttaccca
      121 ttttacattc aggataaaga accccccctc cacccagaag gggaaggctc agaagtgatt
      181 gtctcgaaga ctgcaaatgg aagacgggat ttcttttctt tcaacctgtg ttttcagtca
      241 attaaaattt gtactcaggg cttttcggtt tgaagccacc cctgtgtctg tgatgagcaa
      301 tccttcttgt ttgtgcagtc attcattatc tccattacca agaggagaat agaggacaat
      361 tacattgttt ggacgaatca gagtgttagg aggaatattt atcatggtgg cagagtgcag
      421 cacctgacag cgcacgattg atggccagga atgagtgtga gtggccaaag cagtctcata
      481 tgatgcaaat tactgactgt ggattccaat ttatcctgtt catttttctt gcctttgctg
      541 aagactatta gtggtttttg aagcagtgaa ggggtcatta ctaatgtggg ctagaagcag
      601 gagggggaag gaggggaaaa gccttctgta attacacagc cttcaagaaa aggctgcagg
      661 cctagccaaa aaagtgtcaa cacttagcaa tcagaaaaat ttattttctt tttatcctta
      721 acccatatta actcaacatt atcatctttc tttgttaata tttgcagaat attaaaagc
//
LOCUS       KCPA01003821             552 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 421339tic ultra-conserved element locus
            uce-4889, sequence.
ACCESSION   KCPA01003821
VERSION     KCPA01003821.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 552)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 552)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="421339tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>552
                     /note="ultra-conserved element locus uce-4889"
BASE COUNT          170 a          116 c          108 g          158 t
ORIGIN      
        1 gtaggtctag gaaacataac aacgacagga ggatcattgc gagacagcca atgtgaagaa
       61 ttgtagccaa aatctgaatt caccaaagct gaaatagcca caaccaactg tccatagcct
      121 tgtctacaat ggctttaaac aaaaaatata aagagccatg gacagtttcc ttacccctgt
      181 ccagaatctg atgtaaacaa catccataga aactgggatt gttaagaaag tttatccata
      241 tatctggata gcaataaaaa gcgtttccta ggaaactgta aaaacctgta ccaagcagtg
      301 tacagccaag ccgagaggaa cattaggttg atttatatat tcaaggtaca attttgcatg
      361 atctctttct gatcctgtga taatgtacaa ggagagcacg tgtgaaggtc agggctttgt
      421 ttgcttgctt tcttctctga aacatctctt gtgtaactca ttggtctttt cgattctcgt
      481 ttccaataac agggcattac cactccctgc gtctgtcctt cctggtcatg ccaaggctgc
      541 tttagtaatt tc
//
LOCUS       KCPA01003822             721 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 421452tic ultra-conserved element locus
            uce-2485, sequence.
ACCESSION   KCPA01003822
VERSION     KCPA01003822.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 721)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 721)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="421452tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>721
                     /note="ultra-conserved element locus uce-2485"
BASE COUNT          258 a          131 c          136 g          196 t
ORIGIN      
        1 taccttaaac taacaaacta aagagagatg agtgaccttt tgaccaactc agggttctta
       61 aagactgact caatttccca tatattgtag tgttaagcga aagactagtg gtgtcctaaa
      121 cgaaagccaa agtcatcaca aaatagcttt tcaaaataaa gcctaggaga agagagagga
      181 agtgatatcg gacttgcata tgcaagacac tctgtatatt tcaaagtttt agcaagtcta
      241 gcacaagatg tccaaatgtt ttctctggct atatcttcag aggctaaact gtgattaata
      301 gcattgaaag aaccctttga agcaggattg gtgacatcaa agccctaatc catgggtggc
      361 aggattttta taatgagtgg gaagcatttt aacacatttc aaaggattta cagcatgaat
      421 aaacaatagg cctctgcaga tgtaccacac acctttcaga accagaacac ataaataagt
      481 gtctatttta atttaaatgt aaataaagtg ttaacacttc tttcagatgc taaatgactt
      541 gtttgcatca actccgcgtt ttgctgttag ctttacagaa aggcagaaac tctaaacagt
      601 cttcagagtt ttgctgtatt acataactag taaggcaaga taggaaaaac aaagaccaag
      661 cacaccaaat cgctggtaaa gcaaatgctg gcaataattc ccttagagag cagagcaaat
      721 t
//
LOCUS       KCPA01003823             575 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 421558tic ultra-conserved element locus
            uce-4699, sequence.
ACCESSION   KCPA01003823
VERSION     KCPA01003823.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 575)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 575)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="421558tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>575
                     /note="ultra-conserved element locus uce-4699"
BASE COUNT          168 a          134 c          103 g          170 t
ORIGIN      
        1 atcaatcatc actgattaag taattatagt accctacatg ttatcactta ccctttatct
       61 gtgtacatta cagaccattt ttttgcattc aaaaataaaa atgcacccca ctgcactgca
      121 atccagctcc aggttgtaaa acagaactct acattactat caacctttaa gcgctacaac
      181 ttttttttaa caaaagcaat tggtttccaa caggctggat aataagtctt ttgacctgca
      241 ttcttctttg acctattaag gtcacccctg tgcttgggca tatagctgac ttaggaaatg
      301 cctgcaagtc ctgcatttca tctcctgccc actcaaaata aagctttctt taaatgtgtc
      361 tgtacgggtc cccgaagacc agggaggcat ccctgtagtg ggcaatggag ggacagaagc
      421 ttctgccttt attaatgaat gcagaccatt atgagtctgg ctggctcctg cactgttccc
      481 agaagcatat actgtacgtg acttaaaatg ctagaatatt gacacaaagc gagctgggca
      541 cccctaagga aaattactcc ttggatataa tgtag
//
LOCUS       KCPA01003824             374 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 421665tic ultra-conserved element locus
            uce-2437, sequence.
ACCESSION   KCPA01003824
VERSION     KCPA01003824.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 374)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 374)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="421665tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>374
                     /note="ultra-conserved element locus uce-2437"
BASE COUNT           86 a          108 c          100 g           80 t
ORIGIN      
        1 tctgcctcag gcaagagaga cccctccagg gagatctggg ctaacccaga ggtaaagttt
       61 tacgaaaggt ggctgtacat cgctcttgaa gccaatcgcc gatcctgcac accaggtgac
      121 cttccttgtc atcttccacg ctcctgctgc gcttactgct ctgttggctt ctctgcactc
      181 accgcccccc ggtcattcaa aggttggaga gacgacgggg tggattttcc agatcccagc
      241 atttcataag gcacacagca acgataggga tattgcaagg gacacgtcaa gacacagggc
      301 agggaaacct ctgttcccca ctgcagccag aggcccgaga aggaggcctt tgggtttgga
      361 caggttgccc agta
//
LOCUS       KCPA01003825             557 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 421771tic ultra-conserved element locus
            uce-463, sequence.
ACCESSION   KCPA01003825
VERSION     KCPA01003825.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 557)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 557)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..557
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="421771tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>557
                     /note="ultra-conserved element locus uce-463"
BASE COUNT          140 a          133 c          127 g          157 t
ORIGIN      
        1 cgtggctctc cgggctgcag gctgctttat aaggatgaat gaagacgaga gggaagacaa
       61 atagaagtga atgaggcgct gctggccgtg attcatggga gcccgcaaag cctgttagcc
      121 tccgcctggc tcccttcgcc gggaataatg gataggtaca gtgcggatgg tgacattgtc
      181 aaaccatcag gaattgctga ttacggtgct aaatattgat ctctgcttca catgtgtcaa
      241 aattctttct tcccttaatt agaacttccc taagcaccct ccaagaacaa accgaataga
      301 tcagatctcc gtgaaaggga gtgtgatacc agaatataat tgtgacctct tgtcttcctc
      361 ctctctctgg agttttgaga tggcttcagc tgtctatcct gcccttccca gcacatgtga
      421 taatcatact catttttccc aatctaacca taggaagatt tttccaaggc tgtgcttttc
      481 atcatttcaa cccaccgggg ctgcagtcag atggcagcga aacttaaagt gccagaaggt
      541 gcctttttct atttgtt
//
LOCUS       KCPA01003826             767 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 421881tic ultra-conserved element locus
            uce-4659, sequence.
ACCESSION   KCPA01003826
VERSION     KCPA01003826.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 767)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 767)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..767
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="421881tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>767
                     /note="ultra-conserved element locus uce-4659"
BASE COUNT          276 a          142 c          128 g          221 t
ORIGIN      
        1 aaaacttggg taaagaaata tatccactta cacacggtgc atgtggttaa acgaagaaaa
       61 ctgtcacttt tcccctttaa aagttctaag tgttcattta agaactggac tgcagaatgg
      121 aatcttaact tccaccactg caagacggag acagttggtt ggaaatagct cttttgaaac
      181 atagaaacta aaggttacct gctacagttt tactaaaaat tgtacaaaat tgccactttt
      241 tttcatatag aaacagttct tatgaccaga attcctataa gacaatagaa aatacatcaa
      301 cagaatgata gataaatcca tccttggaag caattgttat gtgttaactt acagatgctg
      361 tgctaggaca tggaccgcca acactggatt aaccttgcct attagctatg tttctgggag
      421 gaagagcaag tacacggttc acaaatatac caaataacaa ccaaatatac caaatttcaa
      481 cctgatggat gcaagaatac cactttttga acaaatattg agcagaataa acaggtttat
      541 cccctttggc tccacgactg aaatgaaatt aaaaactaga acaatgaaac agcattttct
      601 ctgtttgtgt tttttgttct tttcttttaa acaaagcatt taagacaact ttaaaaagca
      661 atcttacctg attagtgttc ttctgcctta ggcacaggga ccagagaacc gacaaaggat
      721 tacagaaata aagctaattc actagtgatt aatgtatcca gtgaaac
//
LOCUS       KCPA01003827             534 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 421988tic ultra-conserved element locus
            uce-6907, sequence.
ACCESSION   KCPA01003827
VERSION     KCPA01003827.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 534)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 534)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="421988tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>534
                     /note="ultra-conserved element locus uce-6907"
BASE COUNT          164 a           95 c          100 g          175 t
ORIGIN      
        1 gcaccttgta gctgatttta cagcatgaca gcagtcccta gcagagtttc cttgcaaaag
       61 atgtgttgct atttttgata tgcagcccaa atgaagtctc cgaaggagta tctgtctttt
      121 gctaacagcc atcattttta tataaattca gaggtattca tattatgtct tcatcttcta
      181 tatctcaact agtaacaata tcacaactac tccctcctga caactatatt catttctcat
      241 taaagatatt tcatgtttta ttcaggaatt taaatgaagc tatcagagcc tgtaatagca
      301 acagtttggg ataattgtat ctcattgatg gcagcctcaa gagttctaat taatatatat
      361 ttagctccct ggttgtcttt agaccaaacg cctcaatatg aaagactggg agaggcgata
      421 aggagagggg gaagggaaca gactccaaaa tttttgaaat ttggatagga aaatctgtgt
      481 tgtgagaagg aactgtgtgc tctgggattc tttcattcaa tcaaaaataa cttt
//
LOCUS       KCPA01003828             613 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 422097tic ultra-conserved element locus
            uce-2864, sequence.
ACCESSION   KCPA01003828
VERSION     KCPA01003828.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 613)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 613)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..613
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="422097tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>613
                     /note="ultra-conserved element locus uce-2864"
BASE COUNT          215 a           98 c          133 g          167 t
ORIGIN      
        1 gaaatatgaa aatacaaacc aaaccattta actgaaagtg aatgaaaaat aaattagagc
       61 aagcaggata tgttcaggac ctgtctttcc tgtgacctac aggattttaa gagaaaagct
      121 tcagaatttt attggcattg ccactattag acaaactttt ctttcccttc tccccagact
      181 ggggtcagct tcaaagagag cattaagtga atggctaatg gaattaaggg tataataata
      241 gaaggatata gtgagacaat tgtattaaca agaaataaat catgttgagt gtaaggtaag
      301 tgttttttaa ttgattgatg ggaaggatgc tccataggga ggactaacag ccacttgcct
      361 tcccatctac agtaaaaagc caaaaggaaa gaagagataa gaaaattatg cagtgaggag
      421 ataaattatt cagagaagat ggccattttg tgctgacatc actaatgtga aaaagcatta
      481 aatctttgat actagctgca ttcctcagag gttgtagtgg ctgcataagg cattagagat
      541 tacagcttca gcttccctgg atgccttaag tggcttccca aggtgatcca gtaagtgaag
      601 actcagcaat gtc
//
LOCUS       KCPA01003829             544 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 422209tic ultra-conserved element locus
            uce-4261, sequence.
ACCESSION   KCPA01003829
VERSION     KCPA01003829.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 544)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 544)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..544
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="422209tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>544
                     /note="ultra-conserved element locus uce-4261"
BASE COUNT          191 a          112 c          100 g          141 t
ORIGIN      
        1 tctaattgac attagaagaa aggcaagcca ctgcagtgac aggagatccc attttacaga
       61 gtgtgctcta ggctcttaca gaataggaac acaacctgca gccaatgaaa catatagagt
      121 tagcattcca aatggaatga aagactttgg tatggcctca gcacacaaaa gtagcctaca
      181 gaatttaaga aaagtcccac agaccccagt ccaaggctct gctgcccacg aaccacttct
      241 aagcagagaa gccacatcac acagtctgac tgccatgtta gtttggagtt gccgtctgca
      301 atatggacac aaaaagtact gtatgttaga ttagcaagat aatgcaacaa atcagtttgt
      361 acaaatttac agtaattgca tttatattcc cagcacgtcc atgcagtgtg gcttaattgg
      421 atttgaggca attccaatct aaactgtaca aattaagttg taaaattttt cttatgtgaa
      481 aagatgctta tttttaagaa aatttaaaag accctagaaa ctacctccag taccatgact
      541 aaaa
//
LOCUS       KCPA01003830             740 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 422319tic ultra-conserved element locus
            uce-1823, sequence.
ACCESSION   KCPA01003830
VERSION     KCPA01003830.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 740)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 740)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..740
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="422319tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>740
                     /note="ultra-conserved element locus uce-1823"
BASE COUNT          224 a          142 c          151 g          223 t
ORIGIN      
        1 tggaatgtgt tttcagcact gataaaatct gtggtgattt ttctttatag cctaaggaga
       61 aaagttgtat aagtctattg tgtgaagcaa atattttgct gttcaaaata aatgaggact
      121 gaaaaaacat gccactgaaa attaatactt ggcaattatt tctctactca gttgctgagg
      181 tgtaaaatgg ttaaaagaca agaaccagaa ctgctctata ctttttttga ataaggttcc
      241 ttgcaatgat ggtctctccc agctttttgc aaggtacagt agctgcagct ttgtttatct
      301 ggcccctaca caatattgtc aggatgcatt tccattttcc aagtgactgc tgccactgtg
      361 ccacaatctg tgctcatttc tcgagcagct aaaccctttg acactgtggt ttttaattaa
      421 aattacatta aacttaatca gccagaaaga ggctgctgta gaaggcaggt ttgattgcaa
      481 cctgcaaagg gcgctggggc tgccaactcg ctaaagatgt gccggcagat gccaagctgc
      541 tcgtgtgagc cccatggtca caaaaatgct atgagaggtc agttctgtct tcactttttt
      601 ctagcactgt caccagacta taatgcgtga caactcttga taaagctcaa ggaagagaaa
      661 gaaatacatt gctaatacag acaatgtact ctattcattt ctcaagaatt gagggtcaca
      721 gaaaagatat ttgaaaaact
//
LOCUS       KCPA01003831             464 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 422424tic ultra-conserved element locus
            uce-4356, sequence.
ACCESSION   KCPA01003831
VERSION     KCPA01003831.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 464)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 464)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="422424tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>464
                     /note="ultra-conserved element locus uce-4356"
BASE COUNT          155 a           91 c           98 g          120 t
ORIGIN      
        1 aagatatctt ctcaaactaa aacttacctt gaaaaaagtc atggttgctc catcttcaac
       61 tgccccatac tctatctttg tctgcttggc caaatcatca gcagaatcaa taggggactc
      121 cattcgttcc actgtcagaa aggcggctag gttagcagtg tacgaggaaa tgatgataag
      181 tgtgaaaaac caccaaatgc ctcccactat cctggtggag agggctttag gcatgagctc
      241 agaacctaac gaaaaccagg ggagaaaggt gaaacggatg cacataaaac aattattacg
      301 tgttcagcac tttttgccac agtggagaga tgggatcact gtgcttaagc tacaggttta
      361 catgtactgc ttgtacaaac acacacaact ggaatgcaaa ataactggtt aaatttataa
      421 agacagatat tttttgtggt aatcaaaata tagtaatggg agat
//
LOCUS       KCPA01003832             570 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 422532tic ultra-conserved element locus
            uce-7298, sequence.
ACCESSION   KCPA01003832
VERSION     KCPA01003832.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 570)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 570)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="422532tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>570
                     /note="ultra-conserved element locus uce-7298"
BASE COUNT          163 a           99 c          135 g          173 t
ORIGIN      
        1 ataagttacc tgggacagga attgagggga gtttgattct ggggtagggc tggttggtgc
       61 atataggcaa aaacagtgct gcatatttaa acaagcttta ataaggtttc tttaactatt
      121 gagcttaact ctgagatctc ccctgctgta agccataagt tgcttgtagg cttgttctag
      181 agagtaataa gtattgttgt ttagcaattg tgttgttgaa attcagctcc actatgtctg
      241 acagtattta tctaaaatac tttccctggt gcatgctcaa gttccagtaa accgtgtctt
      301 attgtgcgac cttttcattt tccagtgaaa agggatcagc tcgtcagata aaagctacaa
      361 gctgaagtac aggaaaaatg cgtgctcaga aaatccgagc atgattgaaa acaagatgtg
      421 ttaaatcaat gcagtttatc gcctgcctat tcctggcaat tgctgttcta agctcattct
      481 gagcacacac tagatgataa aagtatagtg tcacagtgct cactggggtg tgagggcagg
      541 gaaacatgtt tatcagacag gctgggatga
//
LOCUS       KCPA01003833             766 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 422644tic ultra-conserved element locus
            uce-494, sequence.
ACCESSION   KCPA01003833
VERSION     KCPA01003833.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 766)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 766)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..766
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="422644tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>766
                     /note="ultra-conserved element locus uce-494"
BASE COUNT          239 a          147 c          139 g          241 t
ORIGIN      
        1 aaatctgtgc ttaatacagg gatttaattt catgacttac atcagtaatc gacacatcac
       61 tgataaaaga catacaaaca gatataagta gaagctagtt tttaaagagt atagctcatg
      121 gcaaaaagac acaaaattga actttccaag atcagtactt aacataaaaa tttcatcaca
      181 atctttatca tcttgcagtg gttgcagaaa aggcctaagc tctctccacc tttaacttcc
      241 taaagtcgcc tattttacct tcaaatctga tgaagtgtca aagtcattta ccagtaatga
      301 gttctgctgc aaattttatt ttgcttggaa tttaattaat gggccaaaga ctttccattg
      361 tgatttgagc aaatgaataa taaatcaaga aaggagattt gtcagggaag gaacatctgt
      421 ttcttacaag cgttacaaca tgactacagc tcggctgtgc attaccagca caaagacggt
      481 aggagtcctc tcctctgaag ctctcttcat ttattgctcc actgaaggtg aacagagagc
      541 actctaatgg gcctctggtg ttaataaaag cttttcgctt ccccagtttc gccgtagccc
      601 cttccttttg ggtgctactg tccttagtac atggtttgtt ggtcaacgtc aggattctgc
      661 agtgtcagtg ctttattgga tgattaataa gggaaagaca aattcataag cagaaacaat
      721 atgaaattgc catcatatta gtgttaactg tcatgctttt tatttt
//
LOCUS       KCPA01003834             661 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 422755tic ultra-conserved element locus
            uce-7058, sequence.
ACCESSION   KCPA01003834
VERSION     KCPA01003834.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 661)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 661)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..661
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="422755tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>661
                     /note="ultra-conserved element locus uce-7058"
BASE COUNT          209 a          132 c          140 g          180 t
ORIGIN      
        1 tgggctggtt ttgttagctg gaggattttt accaccgctg cctttggaca gcagtatccc
       61 aatgtacttc ctgatgttgg cagttgcaga ctgttgccag ctagcaaatg cttaaacaaa
      121 atcaccgttt gttccagaat gataaaatga ccctacaaag tgaattacac tgtgaaatgt
      181 aaaacacagt gtagatgcac aaatgattat ttcattatct ggccaatgta agaacgacag
      241 atacaaattg ttccaatcat agagtgatga aagagtaatg aacaatgggt tcttgaatga
      301 gcacaggaac aaaataatga attgcagttt aaatgaaatc aggagtcaat ggactggatc
      361 acagactgtc cttcagacat aggaattctg cattagttaa acagtgtcat ttggaaaaac
      421 gtcctttaag agaaggaatc aaaatggctc agagagagac agacatgatg agcctggaca
      481 ctggttttag caacggactg gagcatcccc attcttgatg ttgatctgcc acaaattagc
      541 agcttccacc ctgcaaagtt attgttacct ttccgtttca accttcctct tcctctacca
      601 ctagttactt tgctgcaaca tctgatgaga tgcagatcct gggcacagaa tgaagaccga
      661 g
//
LOCUS       KCPA01003835             455 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 422850tic ultra-conserved element locus
            uce-6637, sequence.
ACCESSION   KCPA01003835
VERSION     KCPA01003835.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 455)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 455)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="422850tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>455
                     /note="ultra-conserved element locus uce-6637"
BASE COUNT          136 a           71 c           93 g          155 t
ORIGIN      
        1 ttccagcaaa gaaattcttc ctggtgtcca acctgaacct cctctggtgg agtttgaggc
       61 catttcctct tgtcctttct ctaattgctt gggataatga agcattccag aaattgtatt
      121 tctgatttta cattcacaaa tgcaggcttg atttgatgac taagttgtgt ttcctagata
      181 tgacagctat gaggaatatc agcatgaaag gctgaagagg gaagaatacc gcaaagagta
      241 tgaaaaacgg gaatctgaaa gggccaagca aagggagaga cagaggcaga aagcaattgt
      301 aagcactgta aagataactt tcatgttgaa gtagatctgt ttcttttcat agattctaac
      361 actagaaatt attttctttc atttgtttat gtgtatttct tagtattttc attttaagca
      421 aatacgtgtt ttcataataa tttttgcttt ggtgt
//
LOCUS       KCPA01003836             743 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 422962tic ultra-conserved element locus
            uce-1972, sequence.
ACCESSION   KCPA01003836
VERSION     KCPA01003836.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 743)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 743)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..743
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="422962tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>743
                     /note="ultra-conserved element locus uce-1972"
BASE COUNT          214 a          164 c          169 g          196 t
ORIGIN      
        1 ttttgcccga gctctgggct ggaggagggc accggggctc atccacccag ggcaatgcga
       61 tggagccagg gtcccccagt gtcccctggc tgtccccagc ctctgtgcag ttgttggctg
      121 cgctgctgcc cgggatgccc gagccccttt gcagcctctc acctcgcaga ttgtgcggga
      181 ggcagcctgc cttttaatcc aagccagaaa tggaccaggg tacatcctca atgcaactaa
      241 ctgtttctaa aaaaaagacc atctggtaat tgtcttcctt tagatcttcc cttaattatg
      301 cttttaatta aagatggttc aaggcattgg accacatgaa gggcagtaat tacaaattac
      361 attacaaacc caacagatgt agctctatct gctgggaaaa aggtaccgga ataaaatttg
      421 actaaacttt aggataaatt aatccgctgc cttgagaaca gaagcacatt ttttattatg
      481 cagactctag ccaggattta agttctctgt catgattgtt ttcatatttc tttgacatct
      541 attgatttgg aggcagctgc aaggctttgt cacaagagag aagagcagtc acaatatatt
      601 agcttgatgg cataactcga atatgagtag gaaggataga aacatgacag ggagccacgt
      661 gactgagtga tgggtctcca acaaaataaa gaaattaatt tttaataagc tttaaaaata
      721 ccacagctag tgcaacagca agg
//
LOCUS       KCPA01003837             738 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 423072tic ultra-conserved element locus
            uce-810, sequence.
ACCESSION   KCPA01003837
VERSION     KCPA01003837.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 738)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 738)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..738
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="423072tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>738
                     /note="ultra-conserved element locus uce-810"
BASE COUNT          223 a          133 c          131 g          251 t
ORIGIN      
        1 caattcttca actgctatga atgataatta aagctatttg tgcatgtata gcttataatg
       61 attaacttgt ctgcagtcag ataaacaaat aacctgcacc tgtaaagact ttatttcctg
      121 gaggtaaaac aactgtttag gaaagatcat gctggcaaaa cagctgcttg cattctggag
      181 agaaaacaag tttcaacaaa cgccaactct ggtgttttat cagctctatc tcattaactg
      241 gaaacaaggc ttaaatgctt tgtttataaa ttatgattat tcctgattgc agcagttact
      301 gatagtgcca ctcatttgca atgcaactct ttgaattttt ttaattacaa tttgaaacaa
      361 ggcagagaag attaattaac ccacctggct ggctggcacg tagtcctggc ttggttctgt
      421 catactcata tacatgttct caccgtcaaa ctgcaaagga aataatagta aacattcagc
      481 aaacttgatt ttttagcatt gactgcagtt gctataaaat aatagtacag cctgtttttt
      541 ttgtaattgc atgtgtgcat cttgtctttg atgttcctgt tgtcatcctt attgacccta
      601 gatgtcagtg atttggagta attagcgctc tagtaattac agctagcaag gaagaaatga
      661 atggtttcct ttcatctgca atctgtttta aaacaaaatg cctcattttg tgcaccatgt
      721 atacatagtg ctgttagt
//
LOCUS       KCPA01003838             451 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 423180tic ultra-conserved element locus
            uce-609, sequence.
ACCESSION   KCPA01003838
VERSION     KCPA01003838.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 451)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 451)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="423180tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>451
                     /note="ultra-conserved element locus uce-609"
BASE COUNT          161 a           96 c           62 g          132 t
ORIGIN      
        1 agaaatcatt tgattttcat tgccctggag agaattaaat acccccaagg aaaaattctg
       61 gtacattctc tgcacacatt tacatgcagc cagtgaagta aacatttcca taattgctca
      121 cttcagaaca cgttacccag ttcctaggta caataactgt caggagtcaa tgaggaataa
      181 agaattttcc tgaatccttg cacataacct gactagcatt aataactcca cagttgtaca
      241 taagttaaga aatggattac tgccaggcag caaccttgct ctgaacactt tgggcataat
      301 gcattcttca aactatcatt aataaaataa atacatataa aaactcaagg ctactgataa
      361 caaagtctct ctcagtaaaa accatgcaca aactattttt tcttaacctt ggaaaatata
      421 gtaacatatg gcttccattt acttccaatt t
//
LOCUS       KCPA01003839             635 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 423289tic ultra-conserved element locus
            uce-6643, sequence.
ACCESSION   KCPA01003839
VERSION     KCPA01003839.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 635)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 635)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..635
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="423289tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>635
                     /note="ultra-conserved element locus uce-6643"
BASE COUNT          226 a          132 c          107 g          170 t
ORIGIN      
        1 atctagtccc acttcacctc aaagcatggt cacttaagcg aaaaccagat atgcatttca
       61 actaatcaaa accaaagagg ttcaatcagg caatgtgcaa ccagcaaact gacatcttcc
      121 catggtccat ctgaaagaga gagctctgca gtgaccctct agctgactga atgtaaaaga
      181 gaggagtatg aaatgtgctt tgtgaagcag aactttatgt caggttaaag ctagacacat
      241 ctcttccaca cagtctaagc tcatcaattg tgcacctaaa attttatggg aaaggatact
      301 gtttgatgca gtccaccagt ggtccataac aacagtcatt cacagtacac tgcagacaaa
      361 taagagaagt agtatactga tgggcaacta caaaaccatt ataaagagta tcttaaaaac
      421 agtaattact tttcctcaaa aaggctatca gatgctgttc agatttaatc acagaaaaca
      481 aaaactgcat gcttttattc actataaaag caagctatta aaaagtgaaa tgctcccctc
      541 acaaatattg cactgccatt tatagtgcac tctgacctca ctgatagttt atgatgacag
      601 taattaaatg aggtttaaaa tcttttactc tgcta
//
LOCUS       KCPA01003840             586 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 423398tic ultra-conserved element locus
            uce-699, sequence.
ACCESSION   KCPA01003840
VERSION     KCPA01003840.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 586)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 586)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..586
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="423398tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>586
                     /note="ultra-conserved element locus uce-699"
BASE COUNT          197 a          125 c          100 g          164 t
ORIGIN      
        1 cccctcttcc tcctaccagc aaggcattat aaaaatgtct tatctgcttt cgactttttt
       61 ctgaaatcac agtactgctg aaaaagaaga gtagagacaa aaaggcaata ggatgaacaa
      121 gaaaatggca tgtaaaataa ctataagata ttccagggga aaatgcacga gctgtaatca
      181 ttcaagattt cagcaacttg actcttcaca tgctgaagcc acattttcaa ggtcttatct
      241 gccatatggt tccctgtttg gatgatttat taggtgtaga aagcacactg ataaatttta
      301 ctgcatttcc ctgaataggc aacctatggt gtcaataaca aagctcaggc cgctttaatg
      361 aaaactgtaa gcaccaaagg gtaaccattt atttatgagt cactacagta ttactagggc
      421 aaaatttatc ttcccttctc acgcactctg cagaaaccaa atctggtcaa agaaacagcg
      481 atcacatcca tatgtcagtg acttactaac acgtctcctg cacactcagg gcttgtagcc
      541 aaataaacag tttccattta atgactaaat gtaaaagatg ctctta
//
LOCUS       KCPA01003841             548 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 423505tic ultra-conserved element locus
            uce-6796, sequence.
ACCESSION   KCPA01003841
VERSION     KCPA01003841.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 548)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 548)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..548
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="423505tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>548
                     /note="ultra-conserved element locus uce-6796"
BASE COUNT          181 a           98 c           98 g          171 t
ORIGIN      
        1 tgcatgtgtg tggttcccat ttatggtata ggaggccatt ggattatcaa accagtaatt
       61 ttgccattag tttttcagtt ttcttcttgc atgcatattc tgtggtcaaa tccattagtg
      121 agttagagtg ataaacacct ggagtccatc aaaaacaaag agagtcttat tctatatgta
      181 caagcagcca ggcgaacata acaagcaaag actgcataat atagaattca aacaggaata
      241 tgttttttat gaagtgccag cataagggag atcaaagact aaagccaaat aaatatcaac
      301 tgggtaccag caaagaaaca tacttagaac ttaaagtaat cagaaacaaa cccagtgtat
      361 gccaacaccc tctgaattca aaaataacat tttcctcatt ttcataaaag gtttgaaggc
      421 tggcagattt tattttggtt ttcaatctac tgtttttatg gctggaaggg aacttttatt
      481 tctaacagac aaagaaaaat catctcctca ctccatcgtc tacttccttc tgggtttttt
      541 tgggagtt
//
LOCUS       KCPA01003842             839 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 423618tic ultra-conserved element locus
            uce-1090, sequence.
ACCESSION   KCPA01003842
VERSION     KCPA01003842.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 839)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 839)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..839
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="423618tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>839
                     /note="ultra-conserved element locus uce-1090"
BASE COUNT          248 a          163 c          153 g          275 t
ORIGIN      
        1 gtaaaacatc tgttatgaga atattttatg gtgtttgctg tatgcagcaa catgtccgta
       61 atctcagacc atatttgttg tgccatagtc actctccacc tctcctcact gcacagttct
      121 gatgctcaaa gtcaccttga ctgggcaagt attaatttct gtcagtggtg ctttaaatgt
      181 ttgcatagac agagttatca agtgtgagca gagcgtaggt gcggccggag cggctcctcg
      241 cctgcccgtc ctttaggagc tctgctccag ctacataccc agcagccacc gagtccttcc
      301 ttacacatag tctggagtga aaagtcatag tagtattcaa aaggttaaag cagagtgaac
      361 tgttaatttt aatgctttct ctaagcttca gttttaataa gcgaaaatga tgttcttatt
      421 tgcagtaaag tggtgttata aaattctgtc tgtcaagctc attttaaaac catggaaata
      481 aatgatctga caaaatcagg ctattagaca agtgaagaag agtgatttcc ataaaagtag
      541 aggagctgtt ccttaatttc acacttggta gtcttttggg tcgactaaat ttttaaataa
      601 gtgataaaat tatattagcg caattgcatt tttatagatt tttttggtca ttgtactctt
      661 tttcaattct tttattttaa ctcaaaccat tctgctgaaa ggttacctct caacttatgt
      721 tacctcataa cagtttctgc tcacacaaca gaactgtagg ttcacaaatc ctccatataa
      781 aagtatccag aatgaccaac tgacccaaaa gtattctaaa gtggaaagat cattttact
//
LOCUS       KCPA01003843             641 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 423723tic ultra-conserved element locus
            uce-5166, sequence.
ACCESSION   KCPA01003843
VERSION     KCPA01003843.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 641)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 641)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..641
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="423723tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>641
                     /note="ultra-conserved element locus uce-5166"
BASE COUNT          172 a          117 c          140 g          212 t
ORIGIN      
        1 aagtacaaat aggctctcaa ttttgtgaga tgtttactat tgcctatatt cagatatgac
       61 ctgagtttaa agttcaagat tagtaactgg gtaagttgta ccattaccta aagtccttgc
      121 ttatgctata ctctaactct ctgaatggga aattgagtat catttttctt tttatgcatc
      181 ttaattgtgg ttttctactg ttcatttgct tttgatttgt tctagtacat gactgctgct
      241 gcacctatgc aagggaccta cattccccag tacactcctg tgcctccaac agctgtccct
      301 attgaagtaa gtttatctcc atccatgaaa gcagagtgaa gggggagctt cttgcacctg
      361 ttgtttgaaa ggggcctaaa ggtggagtag tggctggaag cttccagctt tttaaatgag
      421 gactgcacat ttcttgctct tttccttttc ctattatttg caagggctct tgttttgcat
      481 ttgttttgtt gtacagcagg acatggaata aaaacatcag tgattatgac tattttttct
      541 tgggagggag atgggaagag acaggaaaac aaacccagca ggcagaccac gaaaccaaaa
      601 gagatttcaa gaagcgaaga ttgcaagagg gtttgatgct g
//
LOCUS       KCPA01003844             771 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 423833tic ultra-conserved element locus
            uce-3651, sequence.
ACCESSION   KCPA01003844
VERSION     KCPA01003844.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 771)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 771)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..771
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="423833tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>771
                     /note="ultra-conserved element locus uce-3651"
BASE COUNT          205 a          182 c          179 g          205 t
ORIGIN      
        1 gacacatcca caaacggcag cggagacttc ccggcgcagg cagtgataga tgaggaattt
       61 tgctcactct cagatgcatg gaagagaata gttttttgtg ttaagagatc attacagctt
      121 caggcctcct actgcactgt ttcctctgaa atcagaggca agattaaatc tgttgtagca
      181 gagcgctctg taatggctct gacagacgtt gtttttcctc ggcctcacat ctgggagtta
      241 accagcagag ctcttgaaac caaccaggtc agctctttag ttgagtttcg tgtctaatca
      301 gccaggaagg ctgaggcctc aggtcacaca tggaaatcac tagagctatt taagtcgcca
      361 gaggttatta ataaatctcc cactatttcc ttaagtaaat aattggaggc ccatctttca
      421 aacaagttat gtctggccat gttatggtac caattttatc cttccttttt tcccttcacc
      481 aagcaggaag aacaaatctc tggtgacaac aatggcaaaa ctgtgaatta taaacatcca
      541 tgtgtctctc atttgaatgc ctcctcaagt ttccttgaca gctaggggag agagaggctc
      601 tttttccacc agagcctgag ccactgaaac tgctcttgca ccagcagaga ctttggggga
      661 aagccgtgca gctctggctg ctgggtgaaa caggagccct gctctctcca ttagatgctg
      721 ttaggtagcc aagttcaggt cctcctggac cagggaaacg aggggaaaag c
//
LOCUS       KCPA01003845             779 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 423943tic ultra-conserved element locus
            uce-1960, sequence.
ACCESSION   KCPA01003845
VERSION     KCPA01003845.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 779)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 779)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..779
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="423943tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>779
                     /note="ultra-conserved element locus uce-1960"
BASE COUNT          230 a          143 c          155 g          251 t
ORIGIN      
        1 gtttgatgat gtaacatcag cgcaaattta attttttgga caaagatcaa ataaatccct
       61 ttggatggaa agcttgaaat aaggctttgt tgaacatcat taatggaaca ccttctctct
      121 gcactgatta agctcattga ccacgagcaa gaaggttgct ttttatttca agcatgtctt
      181 gtttgaaagg gataattgtg cccagcagat cttgtttcta acgcttctta tatatagtga
      241 aatacagtaa tttaacagct tgctggggga acaagaattt gttccagttc ctgatttaaa
      301 tgtttatgct aattgctatt tattggctca gatgcaaatg ataggttggc caaagtgaaa
      361 ttttacgatg agcaaactcc ccccttttgt gcaaattgaa aaagtgaaac aagaagagga
      421 tgaaatgagc cgaagatggt cttaatggct gctttttaat ggggaagata aaattaagac
      481 tgatttacgt ggccaactcc cctgttttct cttatcagct catttggcag gaaaaatgga
      541 aaagtaattg ttcctctttc aatgtgggcc tcaaaccatt atttattggc tgaaattaat
      601 cgctgtttat ccttcattca cgtggaaacc gctctatcag cattatcaac cccagcaact
      661 caactagtcc cttgcaattt agccaacagc aagcacagat cctgatgagc cgtgccttaa
      721 ttttctgggc tgtgggagtt aatgaagact cctttcttag gtggacatat ttgtatttc
//
LOCUS       KCPA01003846             694 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 424055tic ultra-conserved element locus
            uce-3893, sequence.
ACCESSION   KCPA01003846
VERSION     KCPA01003846.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 694)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 694)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..694
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="424055tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>694
                     /note="ultra-conserved element locus uce-3893"
BASE COUNT          189 a          127 c          157 g          221 t
ORIGIN      
        1 aatattaatt ctttattaac ttatgataca gctgctaatt agtacctcca caaatgggca
       61 ttacacctta gcactcggag gtgttttggg gactggggtg tgcagaggga gggacttaat
      121 cctctccagc cccgccacag cgaagaattt caactttcag acaaacaact tcatttacaa
      181 gtgtgtctct aattagctgc agaattagta aagcagagtt ttccccccat agatcggcca
      241 aacccccggg ggaggctctg gaatggagag aatcgcattt ccaattattt tgttgaattg
      301 ctaatttagt tattgtgcct ggcgtaattg tgatgggtat tgggtgtgca attcaatttg
      361 ttttaaatat ttgtgggaag gctgatcagt aatggagctg acctatttca tggcccaaag
      421 tgagagaaga gactaaaaca aaaaacagct acaaagcccc agtttgtctc agtttttatt
      481 ttgatgtctc tcatccctct taagactgtt gatgcaacaa aaggtttaca ttaaaagatg
      541 atggcacttt gatcttgggc tttggagagc ttacagcttt ggtacgtctt ttcttggcat
      601 tttaatatgg agatatttta ggctaaagag ttttaaatgt gatgctggag ttcagtaggg
      661 tctgtcccct atcatgattc tggatcaact gctg
//
LOCUS       KCPA01003847             414 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 424157tic ultra-conserved element locus
            uce-5137, sequence.
ACCESSION   KCPA01003847
VERSION     KCPA01003847.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 414)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 414)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="424157tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>414
                     /note="ultra-conserved element locus uce-5137"
BASE COUNT          145 a           58 c           66 g          145 t
ORIGIN      
        1 gatgaatgct ttggaagtct tgagataatt actggaacaa agaaaaatta tgatcattct
       61 aaaatgaacc ctctttaaac agcaggattt ctctaatact gtacatgctt ttataattac
      121 tttacttcaa tgtaatactt taatgaagac cagtttaatt aaattaaatt tctccctagt
      181 ggtaactcaa tcaaaatgca ttctaccctc attatgttat ccgtaggagt ccaacattgt
      241 aagtgctata agagaagctg gttttaatga gaatggtcat gacatattat acttgagagt
      301 caagttacag aaactttaaa tgtcatataa tgaagaacta tatattaaga tgagagggta
      361 gacatttccg tgctaattgg ttctgtttaa tattgtcctt taaattataa tgta
//
LOCUS       KCPA01003848             655 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 424268tic ultra-conserved element locus
            uce-5477, sequence.
ACCESSION   KCPA01003848
VERSION     KCPA01003848.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 655)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 655)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..655
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="424268tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>655
                     /note="ultra-conserved element locus uce-5477"
BASE COUNT          164 a          160 c          164 g          167 t
ORIGIN      
        1 tgtgttcacc gcattgtcac cccagcatcg gcacgcagac catgagtcct gctggaagaa
       61 gcagagtgga ttgttacagg tgatctaaat cgagtttaag tgggtggaaa gacctaggga
      121 gctggtatgg aagaagcagc aggggctgtc taattagtcc taaagcaacg accactaata
      181 ctggagcgag ggagtgcccc tgtagttctg aaactctccc aaaaagatga cttttctcat
      241 tgctcaccac agccatgcac ctgtttggcc taaactggca cctgcagccg atggaagggc
      301 agatgtatga gatcacggaa gacacagcca gcagttggcc agtgccaacg gacgtctcct
      361 tatatccttc ggggggcaca gggttagagt tacctgacag gaaaggcaaa ggaaccagtg
      421 aaggtatggt tggtgtgtgt ccatgttgtg agtcctctgt ctgcctcaaa ctccagccgt
      481 ccagtctcat gttccattac cttcagtgct gccatcagca ggtgcttttc cagtctttca
      541 tgtctagagc tagtagttgt cagtcctgtt tccatatgtt tctaagtttc atacccctct
      601 gatgtccact aatgcaataa aactgtgtga aaccttctcc acacattcaa ggcat
//
LOCUS       KCPA01003849             977 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 424381tic ultra-conserved element locus
            uce-1357, sequence.
ACCESSION   KCPA01003849
VERSION     KCPA01003849.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 977)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 977)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..977
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="424381tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>977
                     /note="ultra-conserved element locus uce-1357"
BASE COUNT          264 a          201 c          192 g          320 t
ORIGIN      
        1 ttattaacta cctcttcttc taccaaagtt ttataaattt ccatggtttt ataaatttcc
       61 tgctgttggt tacagtgtaa tgattccggg acccgattta tttatgatag agactatcga
      121 actgctctgc cagcagcaca gctaaagggg agcaatagat tcacatttct aaaccatcat
      181 tttgatgtaa ggacattagt agcaaactaa ggtgcattga tctggcctgt ggggtcagga
      241 ttagctggaa tagccagtgt ctctgctgga gtagtggtta ttcctgcctc tcagctatgg
      301 ccatttcaaa ggtcaggtgc cctgtaccca cttggctcag aggaattaga cagaacatga
      361 gtctctgggc tgattactta accaaagaca aaataatgag tcctaagcaa atactgacta
      421 attgaaaggg ctgtaaatcc attacatatt ggtcagggac aatcaggagt atttaatcac
      481 ttttatctat tcaggagcac tgaagctgca acagcaaagc tctgaacctt gccatgtgct
      541 tattattctc atcattatca aaattacttc acagctgttc tttgctacat cacctcagct
      601 ggagatttac taacctgtaa aatgttttta atttggaagt cgagtgagtg cgagtggagg
      661 gttttttgtt tagctgtagg gtatctttag acaagtaaca caggcagaca gcgcagggcc
      721 aaaaataaac aagtttggtt tgtagacatc tccatgttaa cgccatttcc tcttatgaaa
      781 tttgtgatat ctaatttttt ccttcctttc ttgctccttg aaagcattta acacttgctt
      841 attaaacaat caactgcctc ttgcttctct tgaggaaagt ccttctgcct ttttgaaatc
      901 ccttttcctt gtttctgtct cctgaccctc tccatcctgc atgaattaag gaaatttgcc
      961 atcgctggtg aggatgg
//
LOCUS       KCPA01003850             669 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 424493tic ultra-conserved element locus
            uce-7148, sequence.
ACCESSION   KCPA01003850
VERSION     KCPA01003850.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 669)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 669)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..669
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="424493tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>669
                     /note="ultra-conserved element locus uce-7148"
BASE COUNT          216 a          120 c          122 g          211 t
ORIGIN      
        1 aactaaaagt ataaaaactt aataaaatat tttttcaata tagtcataaa catgggaaca
       61 catttctgac cacatctgca aatgtttaat tactttgttg tgacctatgg cagtttaaca
      121 ttatcaaaac tgatttcagg atcagacaaa ttatatagaa tctaaccttg ctatacaggt
      181 tgcccttgga tattacttag cctgactgga gggccttctg gaaacagcaa atgttttata
      241 agtgtcagct cacggctaaa tcaatgttta tgcattgata cctttgaata gcaaacactt
      301 gctgcctgca agctaaacaa tgtttttatc tgtttgccta tttctggtcc ttcaaccaca
      361 gcacagggtg ttgcaaatcg catttagtaa caattatctg ctggaatttc gtgaagagga
      421 aagtagcatg attaatgaaa agtgacacac agagattact ttgctatgcc agtcgccttg
      481 gtgaatgggc gactctgctg aactgaagcc tgttactttt aatgaggtca tcgtgaatgc
      541 taaatacttg aaagattaga cactacaaat gttccagtac tacccactaa tgaactgcag
      601 gtagccagtt aaatataatg atacagtttt cacctttgaa acaaagggtt ttttgtcaag
      661 gtgtttaaa
//
LOCUS       KCPA01003851             459 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 424593tic ultra-conserved element locus
            uce-7467, sequence.
ACCESSION   KCPA01003851
VERSION     KCPA01003851.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 459)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 459)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="424593tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>459
                     /note="ultra-conserved element locus uce-7467"
BASE COUNT          130 a           97 c           83 g          149 t
ORIGIN      
        1 cttcctgatt ttagcaaagt cctgcctttt tccaagcagt taaaagcaag actgacagct
       61 ttatagatgg ggaaatgggc agataagata aacacgcaca atacaaactt gtccaaagct
      121 tttacagttt ttctctgcac cacttccagc tcattaaatt acagtattac tatagatttg
      181 cagcaaaatt atcttttatc tcgtcttctt ttaaagctat ttggcatttg ctggtatttt
      241 ctattataaa tctaattgca gattccaaac agacaagggc tcattaagcc ttaattatgc
      301 acatgttgtt ttcaacaaac attttcattt ggactgctgt gagctgtaat tgttccgaag
      361 gcactgcagc ctcccattac ccacttccct gggatggaaa aagctactca agtaggtcaa
      421 aatctgtctg gaaccttggg ttgtgctgct ccggtggga
//
LOCUS       KCPA01003852             730 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 424704tic ultra-conserved element locus
            uce-266, sequence.
ACCESSION   KCPA01003852
VERSION     KCPA01003852.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 730)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 730)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..730
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="424704tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>730
                     /note="ultra-conserved element locus uce-266"
BASE COUNT          220 a          138 c          177 g          195 t
ORIGIN      
        1 caaattcatc tgttaatagg aaagtttgtg gccaagcttc tgtaactcgt atctgtgagg
       61 aaacagattc cccatttgca gacagaaaat ggagctgttt tctcctaagc ggagagctgc
      121 ctattgtgta ggtaattact agaaggcctg tgttgacctg gcaatgaggt agtatatcta
      181 aatacctgaa gtgaaggaga aaagcagaaa tgaaagcaga ggccccatct gttagactat
      241 aatgattgtg ctatttgaag gcagaaaggt ttgtctgaag cagctggttt ctctccaagt
      301 gaccttttag catttctgct tttgctgtct gacagatgtg tcaactcaat aatttcaaaa
      361 gcccctgagt aaataaccaa ttgtgagcaa ggatgaccca aagcgatgac aaaatgggtg
      421 cacacacagc acattacaga acataatacc tactgaaaga acagggaaca ttatcgaaga
      481 ggaaaaacat tttactcttt atttttgagt aaatggtttt cctgctcaca gatcagttgt
      541 tttcgaggaa gtgaatggaa gggcattgtg acatgtttgc ccttggagca cgtctgtgag
      601 ctggctgcag gactcaggtg tcatctcaga gctcaaaatg gacttcaact ccctccctta
      661 gcccagagat gggaagaagg actgaaggcc acagcttgtg aattattggg gaactgcgga
      721 gagctgacta
//
LOCUS       KCPA01003853             693 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 424816tic ultra-conserved element locus
            uce-7444, sequence.
ACCESSION   KCPA01003853
VERSION     KCPA01003853.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 693)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 693)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="424816tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>693
                     /note="ultra-conserved element locus uce-7444"
BASE COUNT          206 a          120 c          140 g          227 t
ORIGIN      
        1 ttaataagta gacattgcat aaaaatgaca caatccagca gttatttggt aaggccagca
       61 taatcataaa tttactatcc atgcttttcc aaaaatacta acccatattg ttctctctgg
      121 acctgttgca gggatgacta atccagctgc tgaggtctcc ctttatgtgt ttgatggaac
      181 acttggcttg ctagactaca gctgtgtgtt tatgtgcagt gcacacctgc agggccctga
      241 caaatagctg tagtatgcag agtatacaaa attaccctgg cagtgctgca aataaggaag
      301 tttctgtttt gaagtccata tgtgtgtgag tttgagatgc cagctggggt atttatgttg
      361 cattgcacag atgtaaaact gccaactgat tttataccaa ataaaggcta atctttttat
      421 acatacttgg tgtcagagtt atgaagtggt acataagaat gttctcacga cttagctctt
      481 ttaaaataaa agctgacatt aaaagtgctt gaacgcacaa tatgcataga tgctaaagat
      541 aaaatagata tctgctgtag catggtattt taaagttttt attgttgctg atgtatagtt
      601 tttagctgca cataatcagg acttgattta ttgtatgcat atacgctacg ctatatattc
      661 tcgggaagtc acttcagctc tgtggtgaat cca
//
LOCUS       KCPA01003854             571 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 424922tic ultra-conserved element locus
            uce-4540, sequence.
ACCESSION   KCPA01003854
VERSION     KCPA01003854.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 571)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 571)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..571
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="424922tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>571
                     /note="ultra-conserved element locus uce-4540"
BASE COUNT          129 a          171 c          120 g          151 t
ORIGIN      
        1 tatactgact aatttggggc ctgattcacg cggtgctcca aggagagctc ttgcacaaaa
       61 tctgtcaaag cccctcctgc tgacaccagg cgacccactg ccaggctgtg cctgggggag
      121 agcccctcca tcacctctaa aagaatctgt ttcagagtct cccctcattt gcatggggag
      181 atttaatttc catcccttaa atatgacgaa ttgctgagat ttccttcagt taatgctttt
      241 aacagctccc aataaacttc attaatcagg ccagctctag gcccaacgtg cagcctggaa
      301 gcagctaatt tgcctgatga gcctgcgact ttagtgaata aacaggtgga taagccgagg
      361 gttttatggc cttaattaca gtctaatcag ttcagcactt ggcgggcaaa agggaagaaa
      421 agaggtggcg gcagaaagag catcagcagc caagtccctc ccttcccgca tcggctctgc
      481 tcccctgctt caccccctcc tctcctacca ggctttgtct ctcccctcct tcctcctcct
      541 ttccctccag ccgttttgtt tcctgctact t
//
LOCUS       KCPA01003855             684 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 425029tic ultra-conserved element locus
            uce-6462, sequence.
ACCESSION   KCPA01003855
VERSION     KCPA01003855.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 684)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 684)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="425029tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>684
                     /note="ultra-conserved element locus uce-6462"
BASE COUNT          194 a          121 c          118 g          251 t
ORIGIN      
        1 aatttatatg gccattcttt ttctctctct gtggcattag agggaaagca ataatgaaat
       61 gcataaccta catccacaga aaatataact ggtctattta tgattatgat tcacagttcg
      121 gtcactagaa atatactaca gttctgcagg tttatgcctt cagtggttat ttgctaatgg
      181 caactcctgc acacattttc ccacaaacct tttggatttc aagagaaaat gtgtccttca
      241 aacaagttgt ttctttgagg gatctttctg taagtggttt ccactgtgta ttgactactc
      301 acaatatttt ctgttatcat cttgtcaggg ttcaattcat tactccattc attattcaat
      361 ttgttgggcc atgagcatct gaataattga aaaccgcgga agtattataa attatagtgt
      421 cgccatgaaa tcccagtttt agggtttatg gcttgacttt aagaaatcac tctctgttga
      481 aagctggcat atgaggtctc atctttaaag cagagcctta tcagcatgat gatttttaat
      541 atctctatcg ctgcacacct aagaactcag gtttcctgtg tgcattaagt tatagcagtt
      601 tatctgtttt ttaattacta ttagcaatgt gggctagaaa gatattaatt tatttttagg
      661 ttaatataca atttccagct gtta
//
LOCUS       KCPA01003856             558 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 425141tic ultra-conserved element locus
            uce-2925, sequence.
ACCESSION   KCPA01003856
VERSION     KCPA01003856.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 558)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 558)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="425141tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>558
                     /note="ultra-conserved element locus uce-2925"
BASE COUNT          172 a          113 c          118 g          155 t
ORIGIN      
        1 caaagaaggc taaattagca ataataattt cctttgccta caagacatat attgaaaaat
       61 acaataactg gagataaatg actggcagaa taaataattt atgctaatga aattactgca
      121 attagtagtt ccacaatgac ccttttaaaa gccacagctg ttaatgtcag gaagtgctgt
      181 caccgctgac cttatcataa gagaaagtga caaattgaaa atgcagggaa gaccaatcct
      241 caaagaggtc tgttcgggaa cgattagtgt tttctgaaaa ccagtgtgaa ttacaaccag
      301 ctgctctctg gctcggcgtg tctcccatgc tgtgccattt tgttaagctc gataacaata
      361 gttattttgc cccattgaga caagttgtct cgggccactt ccagctctac cggaacccac
      421 tctgtccctc actgatttac aaatgaaact gttgttagag ggcttttcag ggctgctgag
      481 tggagacctc tcataaggat catgtgtgag gaggttgtct ttcaccaaga agagctggtg
      541 tatgtgtcac aaacaatg
//
LOCUS       KCPA01003857             473 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 425245tic ultra-conserved element locus
            uce-7580, sequence.
ACCESSION   KCPA01003857
VERSION     KCPA01003857.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 473)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 473)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="425245tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>473
                     /note="ultra-conserved element locus uce-7580"
BASE COUNT          137 a           91 c           86 g          159 t
ORIGIN      
        1 cagaaattcc aattaaaagc tgtaatggga gcttagggtg gatctgtacc ataagacact
       61 tctaggtcag acaggaggaa taataataat cccaagtaca tttccttatt taactttttt
      121 attgtgttca gcccgcagct gatttttttt accttgtaac atagtcccta attgagacac
      181 atgaagctca taagaggctt tagacaagat tcagctagcc acaaaagtca ttatctcatt
      241 ttcatttatt aacatgatat ttccaatgga ttaacaaggg tttccctttt gttgcctctg
      301 ctgtggcact agccctaaag gggctgctgc gtttctccat ctcaagtggc ttcttactca
      361 cattagatta cagtaatgta cgtgttccag gaatgacatt tattctactt cttgcattaa
      421 aattccctat ttgaagtagc tgtaattgct ggaaatagga taaagtgaac ttg
//
LOCUS       KCPA01003858             735 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 425357tic ultra-conserved element locus
            uce-437, sequence.
ACCESSION   KCPA01003858
VERSION     KCPA01003858.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 735)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 735)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..735
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="425357tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>735
                     /note="ultra-conserved element locus uce-437"
BASE COUNT          231 a          137 c          132 g          235 t
ORIGIN      
        1 tttatctgct ttcttgagta tgtgtgtcca gttaatctgc ccatcttcca agccctttct
       61 cttacccggt gtaaacgtta gactaccata atgaaatcat ttccatgtcc tatagagtat
      121 ttagatcaac aagaccttca cttattagaa agggcagagt agtaatgctt ttggcaaagc
      181 cattattgtg gtattggtat tcactagaaa ggacagaaat agaacaacac tggcctccat
      241 aaacaattcc aatttgatct gtgtacatga taaaatcttg gcttctcaat gcatttaggt
      301 gctgtcatag ctgttgttgc caaataagaa tgcagtgtga tgttattata gtaaacagca
      361 cttaagcaca gctggcagaa ttgatcaggg ccacattaga gtgaacttca gcagatgact
      421 gacgcagcag aaacaataac tgaatatgca aacagttctt gcaatgaatg ctctggggac
      481 cattattttt gactttgaac agggaaaagg ggcagatttg taacctcctt ccacacaaaa
      541 gggttctgga tattctgtaa acatctgact gccatttata atagtagcta gttacaaagc
      601 aaaactctag actcccttga ctatttacat ttcattaatt attaaagacc ataaatatca
      661 gataagtttg tttaatgttt cacgcaggat tttttttctt tgctagaaaa gccttttctc
      721 aattaatgtt aatca
//
LOCUS       KCPA01003859             438 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 425461tic ultra-conserved element locus
            uce-120, sequence.
ACCESSION   KCPA01003859
VERSION     KCPA01003859.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 438)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 438)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="425461tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>438
                     /note="ultra-conserved element locus uce-120"
BASE COUNT          127 a           82 c           88 g          141 t
ORIGIN      
        1 gtgcaccttt ttccaccttt tgtgtgtgaa gtggcagccg tgaatttaat agagggagaa
       61 tgctgtgatt acttaatggt ttcccagaca gcgatggcct ggagaattaa atttcacatc
      121 tgctttcatg gcgttaatct ctcttctcac atcccgcctg ttatgatgtg cacacgagag
      181 ataatgttta aactgactaa agcaaagtaa accagacaag tctgttattg gctttataat
      241 tacataatta actttttgtc tctaatcgtt atggaggtaa tggtgctgtt aaaatgggct
      301 tctgctgagc agaaactaaa tcaaaaatca ataatccata gaatgccatt agggcctgta
      361 acagcccttg ttggattcgc tcaaattttt gtactgcaaa tgaatttcat taggacgcag
      421 aatgttatct cacaagct
//
LOCUS       KCPA01003860             533 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 425571tic ultra-conserved element locus
            uce-6360, sequence.
ACCESSION   KCPA01003860
VERSION     KCPA01003860.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 533)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 533)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..533
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="425571tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>533
                     /note="ultra-conserved element locus uce-6360"
BASE COUNT          166 a          107 c           86 g          174 t
ORIGIN      
        1 cagatgtggc actgtatagt tttggtatta agtactgtca aggttctttt caagcaaaga
       61 actatttatc tacgtaacac agaacataac caacttttgt aagtttcata tattacattt
      121 atttcaaaat gcttggcatt attaatcctt tttatattgt taatataaag attctgcttc
      181 aaaaccccag aaagtttatt ttttgcattg catgcactga tgaactagcc tgctcagcaa
      241 gcatttaaca gattagacac ttgaacatgg tttcgggcaa tgctctctca tgtttctgca
      301 tattgcctga taaacacttc aaagtaaacc gctcataaat atgaaatgaa aagccaagaa
      361 gtcgttatgc acagctttga gatacaaatc tctttattcc cctctgaagt ggaatttgat
      421 tgacataatg agtcatagat cctgtccagg gacacactgc cttatcccct tttcctcagg
      481 agacagggag tctttaaaga aatccacttc agaactttct gatagacagc tcc
//
LOCUS       KCPA01003861             613 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 425682tic ultra-conserved element locus
            uce-6946, sequence.
ACCESSION   KCPA01003861
VERSION     KCPA01003861.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 613)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 613)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..613
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="425682tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>613
                     /note="ultra-conserved element locus uce-6946"
BASE COUNT          184 a          114 c          111 g          204 t
ORIGIN      
        1 tcaacaaaag agaaatggtc agattggctt tgtatacctt ttgtcctttc tagatttagc
       61 aaaattcagt ggtggtgcta aaactttcaa gggaaaaaac actggtaaaa ctgtgttttc
      121 tagggaaggc catgtgtgta aatgagaaac agtggatagc agtggagtga tctcctgtgg
      181 ctctgctagt acaagctttc cccatattgt ctcctgcttt tatattaatt acaacttgca
      241 ttatcagctg tgagtctgta gcccagcaaa tagaaaatac tgcccctgga gacatagctt
      301 cttgtatcta ttttccatct ccttctattg tgctctactc agtattcact gcttttctcc
      361 tagtaacact gttctttaac acaattaggt aagagcaaga ggaataccat atttggctcc
      421 caattattaa aactactggg aatagataca tgtgtgctgt tcactttcta tggtatctgg
      481 cattagttta ggtcatacac gtgtgaaatt tttatagtat gtacacatac acaaaataga
      541 caactttggc agatatcatc cacaatcttc aatgtgtttc tgcaaagtat attactaaat
      601 ttgcaataag aaa
//
LOCUS       KCPA01003862             449 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 425788tic ultra-conserved element locus
            uce-6229, sequence.
ACCESSION   KCPA01003862
VERSION     KCPA01003862.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 449)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 449)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="425788tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>449
                     /note="ultra-conserved element locus uce-6229"
BASE COUNT          138 a           78 c           83 g          150 t
ORIGIN      
        1 cttcacaata ggaagccatc cgtttgtttt ccagatccta atgcaacggt tgccataaga
       61 acacaaatta tgtgtacatt ttaatgcatc tatgcttcat aattatgcat ggttgtgtgc
      121 tgttataatt gacataaaat ataaaacagg tcaaagagca gctattaaaa ctatttttca
      181 ttttgcttcc tgacagctcc cgacatcaat gccgactgca tttaatagga ccatacaggg
      241 aatgcaaaga tagttatata atttcaaccg tattagagcc tccacaactt gcaacctaat
      301 tatttcatgc agtgtcttgt tgtgttactt tatttggaat gtgttcggtt taagattaaa
      361 caattgggct acattaaatt agcatgaagg gggaaaactt ttggatgtgt ttcatagggg
      421 tcactctgtt aggttaagaa ttatcccag
//
LOCUS       KCPA01003863             477 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 425893tic ultra-conserved element locus
            uce-1307, sequence.
ACCESSION   KCPA01003863
VERSION     KCPA01003863.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 477)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 477)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="425893tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>477
                     /note="ultra-conserved element locus uce-1307"
BASE COUNT          151 a           72 c           88 g          166 t
ORIGIN      
        1 aagtaattaa atcaatcctt tgtacttacc gtattctcct ctagtgacgg tactagatct
       61 gattatatgc ttcatgcata ttcaaagtac agcactgaca gctctttaat gagctcttac
      121 ttaatcagta cgaacaatgt tcatcttgtt ctttttttcc tcatacatta gagctaggaa
      181 cagttgggga aaaaatgaaa catccagcat tcatttgaaa aatatattgt actttgaaaa
      241 gtgtctaagc tggagaagtt gcattctgcc ctttaaaagt ctgatggaca aattggatta
      301 ctagtattgg attaaataac aaatggttag aggagaaatg agaaaagctc gctgtgatca
      361 caggctttaa tattttttgt tacttataaa gctgaagggg tctttaacca gttattaaag
      421 tcaggattaa tttgtaatgg tccaacttac tagctttaaa agggttttgt tgttgtt
//
LOCUS       KCPA01003864             405 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 425995tic ultra-conserved element locus
            uce-3585, sequence.
ACCESSION   KCPA01003864
VERSION     KCPA01003864.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 405)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 405)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="425995tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>405
                     /note="ultra-conserved element locus uce-3585"
BASE COUNT          126 a           84 c           61 g          134 t
ORIGIN      
        1 gaactcctta aaggcttgca agaaaatcct ctttcctatg ttgtcattaa taaaagattt
       61 ctatagactt cagcctttca acggtgacat acaatttata gtacacacaa tgcattagcc
      121 catagtgctg ctcaattttt ttactattat gaaaactaat aaattcgtca agctgaatta
      181 agcatacaaa tcagatgagg cataacagat tacatattga agcgccgtgt ctcccgagcc
      241 taaatgaaat ttcaatctaa taattccttc ctggcccggc cataatttgt ttagagatgt
      301 tgttctactt ctttccaagc gctattcaca ccataattaa atgatactca agcttttaac
      361 tttgatttat ttcatttctc cgagctggcg acagtgagag ctgat
//
LOCUS       KCPA01003865             530 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 426100tic ultra-conserved element locus
            uce-6126, sequence.
ACCESSION   KCPA01003865
VERSION     KCPA01003865.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 530)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 530)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="426100tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>530
                     /note="ultra-conserved element locus uce-6126"
BASE COUNT          150 a          101 c           98 g          181 t
ORIGIN      
        1 tttcttcctt tcctctagct ttgtttcttc gtttatccct taaatatttc aacctcttat
       61 ttctaatctc agcctaacaa agcctgtttt cttttcttgt ttcaatgtgt gcctgcctcc
      121 ctacgagctc gcagcacacc tctcatgagg atgtaaaacc taagaaccag atctttgaga
      181 tttcaaaata aaataaaagt aaactctgct ttaaaaacac tttagcagga aagccaggct
      241 aattgtaaat caatgagtct taaaatgcag cattgatctc cagttagaag tttgaagggg
      301 aaagcagtaa ttactgtact gaaggtagac tcttagcaag ttctgggcag aaggaaggct
      361 cattagggca gcacttcaga atctgagtaa ttagtttaaa aagtactttt gtggtgttat
      421 tcccatggct agaaattatt tgagttttca cagatttatc gttctgctct gataaagttt
      481 gatttattat tgtgtttggt ggggaagatc cttcctacac agtcacctgg
//
LOCUS       KCPA01003866             502 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 426209tic ultra-conserved element locus
            uce-6860, sequence.
ACCESSION   KCPA01003866
VERSION     KCPA01003866.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 502)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 502)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="426209tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>502
                     /note="ultra-conserved element locus uce-6860"
BASE COUNT          163 a          116 c          102 g          121 t
ORIGIN      
        1 ctgccctccc tatcaggaga ctatggatgg atccagacat tttctatgct tcatgtcacc
       61 aaggaccact ttactgcgat caggattcca acgaccacct aatttcgaat ctttcaactc
      121 ttttcgacca ggacctcgtt attcggaagc gttacaggaa gaacagctct caacttagga
      181 atcagatctc gttaacgctc tgggaccgct gcaatgtggc actttaagga gtgcatcgat
      241 tacgtctaga ccggcaaaca cagatctaga ggtggccaag tgacattgta ggagctgact
      301 ggaaagtcaa ccaggcccga ccaagagtga ccaagacaga acgattagga taacccacag
      361 gcactcctcg tcataaggcc aacgacacag ataggctggc aaataaaggg tttaatatgt
      421 ggttaaaatg gattttatat atcctcaaaa acgttaacta gaaaacattt aagttacaaa
      481 aatcatatta attacataaa ca
//
LOCUS       KCPA01003867             678 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 426320tic ultra-conserved element locus
            uce-3487, sequence.
ACCESSION   KCPA01003867
VERSION     KCPA01003867.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 678)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 678)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..678
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="426320tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>678
                     /note="ultra-conserved element locus uce-3487"
BASE COUNT          203 a          141 c          139 g          195 t
ORIGIN      
        1 gctgcctgat tctgtcaagg ctccccacct cttgtccctg cagtgtgttc agctcatcat
       61 cctgtgtgac atgtggcatt tagagatctc aacatcttac ttttctcaaa atgtcctggg
      121 tcacatttaa aacaagggca gagcgtgaca tcaggctcca cgtcagggag agctgagcag
      181 tagccaagat ctgggagctc attggaaagc attgtaaaat gttaatttgc cattgtcgac
      241 gctgaagaca gaaataacac ttcagataaa caccacagag agatggtagt tctaatcaaa
      301 ggcacagcac ctcctttcat gcttgcgaac tagggctcca attatgttca ctgctctgaa
      361 gctgaataga gctgctttgc cacactttcc aaattgagag gagaggcagc agtagtgtct
      421 tccaaggcac agttccaaat aacaattaag cagaaggaat cagataagag ccaaacatga
      481 aaatgcagga gttgaaaata aacttttcat ttcttgtaat tgcaatagct tttgttttgc
      541 ttctataaca tggttggtta gagacttctt ttcctttata cacagtgtca ctgtggtgct
      601 agttttctgc attcatttaa cagaaaaata tctgaaatta aaaagtctat gatccgccag
      661 tattaaaatt agagcctt
//
LOCUS       KCPA01003868             707 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 426429tic ultra-conserved element locus
            uce-1895, sequence.
ACCESSION   KCPA01003868
VERSION     KCPA01003868.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 707)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 707)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..707
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="426429tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>707
                     /note="ultra-conserved element locus uce-1895"
BASE COUNT          240 a          124 c          115 g          228 t
ORIGIN      
        1 ttaaatgaaa gataaataaa agtttcaatt taggaacttg agtgtattgt gaaaagccta
       61 gtcagttttg cacaggaaga agtgtagaga ttcctcatgc tttatgcaaa cagtaagttt
      121 tagacaacag gatcaggtcc acaatttgct tttaaataaa tgccaccacc atacaaacta
      181 caaaggtgaa aaaatgctgt atcttgcatt ttcctacctc ctgtggctag ggacagaatg
      241 cagacatgcc acaataatgt tttttatttc tactgttcaa accatattaa tgagaacatc
      301 attttggaga actaattatt tctatttgtc ttgtgtcaca ctttctaatt cccctatatt
      361 agcacagcca aagcaaatta attgcttttc cagcagttga accttgtcca agaatgagct
      421 cacattccct tccagttttg cagtttctag gagtgcattg tgtcaaaaat ttctcttgat
      481 actaaacata gcccagagaa tatctttgca gatttctgtt gctgctcact tgatgaaatt
      541 tataagttta agtgacccac taggaaagat aaagttctta gctgcaagat tatacatcaa
      601 aacagttaaa gtgaaattaa aattaaatga atgaatctca ctgaagcaaa aaaagcagta
      661 attaatggtt cccttaattg tcttcataaa atatttgcat gggtcta
//
LOCUS       KCPA01003869             571 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 426537tic ultra-conserved element locus
            uce-148, sequence.
ACCESSION   KCPA01003869
VERSION     KCPA01003869.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 571)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 571)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..571
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="426537tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>571
                     /note="ultra-conserved element locus uce-148"
BASE COUNT          136 a          101 c          130 g          204 t
ORIGIN      
        1 ttcagttagc ctagcagaca gttgctcaga aggatatttt gcatgcaagg atctctctct
       61 tttttttttt tttaatttcc attattgtta taaagaacat tgtgacttta atattagcat
      121 tttgctttca acagcaatta gcaatctctt ggtttgctgt ttggtaaagc atctgttaat
      181 gaggtcatct agtttaaaat cccagctact ggaaaataac agggaggagg tcaaatctat
      241 cattttgtgt atattctctg ctcttttcag ttttctaaag aaaagatatc tttgttatcc
      301 acaataagtc attatgaccc gttactggcc ttctgtattt tctaccacct caagatacag
      361 taagttcttt cttgaagtat tgaaatagga cagttcagtt aaaatctttg cgcatctgag
      421 gatgaggaat tggtttcatt tttgtttccg gagtttggag ttcagttcta acgaggagtc
      481 gcgtctatgg tggacggggt tcccggggtg gtggacctcg gagtagctgc tggtggagtg
      541 tcgatggggc tcccggcccc gctgctgggt g
//
LOCUS       KCPA01003870             760 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 426644tic ultra-conserved element locus
            uce-5639, sequence.
ACCESSION   KCPA01003870
VERSION     KCPA01003870.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 760)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 760)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..760
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="426644tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>760
                     /note="ultra-conserved element locus uce-5639"
BASE COUNT          266 a          135 c          141 g          218 t
ORIGIN      
        1 ccccaaaagt ctgacagaag actgaaggac tggtttgaga atcagtaatg ttttcatttc
       61 ctaacgagct tacagcagaa gaaaaattta actatgatat aaagtcttcc acagtaacag
      121 aacacagagc cctaatcaag aaatggacca tttgtttaaa aacagtctat tgagcatgct
      181 ctaccttgca aatggaatat gccaagctct gtcacagatg gcaagctttg acagttccca
      241 tccgtagcgt cgatactcga cagttcagca caagatcagt gacattctgt ctcattagag
      301 ccacgctaat tatcacagct agtttcaggg gaaaccatgt gttgcaatgg tcaatttgaa
      361 ggagtctgtg catcaacaaa ctggtaataa ggatcagaca ccttattata tgacagcatg
      421 ctgcctatga tctgatttac tgaatcagag gtactgaggc aacactgaag cctgatgggt
      481 tatggaatcg cgtgtacaca atgtgtagct gaaatatgct ttaaaaataa aagggagcta
      541 tatagaaaca atacaaattt aaaacggtga agttataata tggagttttt ccatttgaca
      601 ttaagacatg cagagatgtt agagatcttg tcagccagtt ttatctttaa tcaaatcata
      661 taagataaat aattcaaaat gaaaactgta aaattatgga ttatgctaaa ttataattca
      721 ttccatactc tgatttttca gtttcaataa catgtaccaa
//
LOCUS       KCPA01003871             661 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 426754tic ultra-conserved element locus
            uce-347, sequence.
ACCESSION   KCPA01003871
VERSION     KCPA01003871.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 661)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 661)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..661
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="426754tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>661
                     /note="ultra-conserved element locus uce-347"
BASE COUNT          221 a          147 c          140 g          153 t
ORIGIN      
        1 aacacctctg acaccttccc aatcacaagg aaccactgcc acagtcagga aatcacatct
       61 ctgccagctc ccaggctggc agacacatcc atccgtacgt ataagcaacc cgtcaacttt
      121 gttcaacaat taaagtcatt aaaaacataa aaggaaccac gagaagtgag ggtgtttggg
      181 cctgttggga gatccagtgc cccacatgcc ttctgccact gctgctacag ttaagcaaac
      241 tttacagcca gtcaagccat catccaacag agcctatttg ctgagcaaca gtggagcttt
      301 gtggtttgcc tcacagttga cagtaagtta tgagcccttt gtgagcacag gggaaggaaa
      361 acagagatcg gaatttggca ggaaaatata atacagaatt ctcctgtcta tggaacctga
      421 atttttgtga aaacaatcaa gcattgttga aagaaagaaa agcaactttg acagatgaaa
      481 tatagagggg ccccttttag gaaaacagta aacaaagcac cattcaggcc aggtccattc
      541 tgtcatttat aaagatagtt tcttctgtgt ggtgagagtt tacagcaaag agttcagatt
      601 caacaaatca agtgtaaaat ctcccacagt aaaacagcta gctaggaaag gacaggaatg
      661 c
//
LOCUS       KCPA01003872             729 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 426842tic ultra-conserved element locus
            uce-2907, sequence.
ACCESSION   KCPA01003872
VERSION     KCPA01003872.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 729)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 729)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..729
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="426842tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>729
                     /note="ultra-conserved element locus uce-2907"
BASE COUNT          209 a          138 c          145 g          237 t
ORIGIN      
        1 ttttgtgcct ccagtgatct cgcattcctg ttgtacgacc aggtttttcc atgcagcatg
       61 tgggctttct tattcccctg tctgtttaat tttgctctta aattttactg tgatttcatg
      121 ccatgtgtag actagagtgg tggagctgaa atactgtgca gatgccatgt taagtaaatc
      181 ctctttttat acatacaggt acaacagaat agctcgggaa tggactcaga agtatgcgat
      241 gtaattaaag aaattattgg ataacctcta caaataaaga taggggaact ctgaaagaga
      301 aagtcctttt gatttccatt tgactgcttt ctatgagccc acgcctcatc ttcccctgtg
      361 cacatgttta cctgatacag cagtgctgcg tgttgtacat acttggaaca acaaactaga
      421 aatactgtat ttccccgtac caacattgac tcctagcaga gaagtgtgtg tgtgaaaagc
      481 tggttcttca gtcataactt tgtgagccta aaagcattcc ttgctgagtt aaattgggaa
      541 atcaaatagt attgctgatc catgaaggat tttaaatgga atccttttaa actcataaca
      601 gttatgaaaa gcaaggtgaa gaacttgaag ctgtttctgt attcatttta ttctgaagga
      661 cctacacctt aggtaaatgt tatgaccaat gagaaactgt acccacatcc tgtgtttaag
      721 gtctaagtt
//
LOCUS       KCPA01003873             564 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 426950tic ultra-conserved element locus
            uce-7276, sequence.
ACCESSION   KCPA01003873
VERSION     KCPA01003873.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 564)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 564)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..564
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="426950tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>564
                     /note="ultra-conserved element locus uce-7276"
BASE COUNT          193 a           88 c          100 g          183 t
ORIGIN      
        1 aagaaaatgt ttaaatataa agaaactttg aagagtatgg atcaacattt gttacataag
       61 tagatttttc taaataagtc attctccact ataacatata gcagagtaac ccccatttca
      121 caagaccatt ctttttgtgt gtatgtttta tttcttgcat caatgactca taaaatgcaa
      181 ggaattaatt taaggcttga aagctaaaag gaagagaagc tgatatgtgt agtacagatt
      241 cttgtatcta actacataac atatttcttt tccacaggag gtagttatga caaattagaa
      301 gtctgaaaat tttctgatgg tgtaaaggct ccagctgtca ctagggagat agtgatcaga
      361 tttcatagct gcatggtccc atggcaccac taagagttcc atatggtcat ccaaatgttt
      421 caactaaacc caattccacc atggcttttg cttttagaaa aataaaattc tgcttggcag
      481 gaatttttcg taatgccacc aataaacaaa acttttttga tttggtagaa aataattgtt
      541 tcaggttgaa gtgggtagaa atag
//
LOCUS       KCPA01003874             610 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 427058tic ultra-conserved element locus
            uce-1167, sequence.
ACCESSION   KCPA01003874
VERSION     KCPA01003874.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 610)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 610)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..610
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="427058tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>610
                     /note="ultra-conserved element locus uce-1167"
BASE COUNT          204 a          104 c           99 g          203 t
ORIGIN      
        1 atttatgaac ccaagccttc tttccataaa ttttagccaa agaggtcatt ccatgcaaac
       61 ctctaaagga aagaggattt tcgaacaatg gaagaagaga ctttcttaca ctttaatgat
      121 ttttttgctt cccatagata ggaactggaa ctccacacta ttagccacaa atggcatttt
      181 gaaatgactt tttttttttt gggcaaaccc aaaagacatt gctaagattt acattttcaa
      241 atatatgctg accttttttt cctctttctt ttagttcatt tgtcatcagt atgtaattga
      301 atcaatatat ttcctgatca acccaaagat tgaataaggt catgggaagc catgtgtgga
      361 cattaaaaat cattatttta ctcaaaatga gcagagatgg catagaccat tcagagttcc
      421 aaatgaaatt ctattagatt ctattacact tttacaatta tagagacgtt ccaatattac
      481 aaggggaaat gaagtcataa taaaaaagcc cagaggtgta ttacaaagaa atgggcatac
      541 tatttttcta gttaaaaact tgatgaaagg agctctgcta cttttcagtt gctgagatgt
      601 gaccttgttc
//
LOCUS       KCPA01003875             609 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 427164tic ultra-conserved element locus
            uce-3647, sequence.
ACCESSION   KCPA01003875
VERSION     KCPA01003875.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 609)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 609)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="427164tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>609
                     /note="ultra-conserved element locus uce-3647"
BASE COUNT          180 a          108 c          105 g          216 t
ORIGIN      
        1 atacactcta gccttgaaaa tagccctagt actaagaaat agcattaaaa caccagcagt
       61 tgctatgggg tgttttgtac cttctagtta atgtttgaca gtctatgtat agatataata
      121 tgatatagtt tcattagaca tgtattataa aaacatttac tcttcactcc tttttgttag
      181 gtagaagaag ctatttgttt cctaattgat tttctacgtt agttgttcat tgaatagata
      241 agtagtgcct gtgatatttg attacagagc aaggcaccca tttaaccttc cgttctttcc
      301 tggccaggat ttcaaataca atacaacgta cctcccttag gctcagtagg attagactgc
      361 tagcagtaat ccctgatgct atgaaataga cctgatagaa cttcaactca cttgtttagg
      421 attatgctca tgaatttcag tattaaccct ttgggaacat gtgtggttta tgctgctgta
      481 gtagatacat atcaaaactt ttataagaat tcgcttttgc ttggtgatca aagtgtaaaa
      541 ttcgcactcc tatagcataa atccgcagat ttattttaat tgcaatgttc agatgccttt
      601 tgcagttca
//
LOCUS       KCPA01003876             537 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 427273tic ultra-conserved element locus
            uce-7778, sequence.
ACCESSION   KCPA01003876
VERSION     KCPA01003876.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 537)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 537)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="427273tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>537
                     /note="ultra-conserved element locus uce-7778"
BASE COUNT          187 a           87 c           94 g          169 t
ORIGIN      
        1 ttctaaaact tttctgaaac atgggtttgt aaataaatga tttttttgcc atcaatcaat
       61 gctgctttca gacaactttt acttatttaa taaattactt caataaattt ccaaaggatg
      121 gtagtctgtt tagcccagcc tattaaaagc attaagattt gagcactggc tgttaaaaaa
      181 atggcaatat cacaacttta aacaaatgcc aaaaagcatt ttccagagta ctgggattgt
      241 aacaatacca ttaatgaggg caaagaggtt ttaatgcaat ttgcacattc taaagtttca
      301 aaaagaggtt ttgagttagt gcattattaa tgttctgaac atctggaact atgtaagagc
      361 cacagacatt gagcaagtgc agggtttccc cactaggtct gatactgact gatttcctcc
      421 ccagcctttt tagaagtttg agacagtaaa atgacaatat ccagataaga gtgaaacatt
      481 ccacagtgtt atgtacagac ccattaggtt attaaaaggt gaatttgaaa tgaaata
//
LOCUS       KCPA01003877             330 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 427378tic ultra-conserved element locus
            uce-6981, sequence.
ACCESSION   KCPA01003877
VERSION     KCPA01003877.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 330)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 330)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="427378tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>330
                     /note="ultra-conserved element locus uce-6981"
BASE COUNT           96 a           65 c           49 g          120 t
ORIGIN      
        1 ttaagagtgc aaatattctg ccgtcactca tgaaaagttt ttaataataa atatctaaca
       61 attaatgggc tggtagctgc agttgtcttc agggcataat atctaatttc cttgcaatgt
      121 ttcatatcct tacttttcat gctgcaacag tctatcatta aaaccaaacg caggtttcta
      181 tcatttttat ttatttttca aatcaactta taaatcagtg ccagaccttg ttacagatga
      241 gttccaataa attatcagct gtggacaaat tctgaatgta ttctctgttt ttttttccac
      301 ccaatgggct cccacccttt gagactggag
//
LOCUS       KCPA01003878             593 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 427489tic ultra-conserved element locus
            uce-1163, sequence.
ACCESSION   KCPA01003878
VERSION     KCPA01003878.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 593)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 593)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..593
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="427489tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>593
                     /note="ultra-conserved element locus uce-1163"
BASE COUNT          176 a          105 c          122 g          190 t
ORIGIN      
        1 ttttcttttc attccatttg acgtttatga gagcatttgg ggaaaaaaat aattataatt
       61 tgggcaaagt aatttttata aataatttaa aattgtttaa tgacttctta tctgaagcct
      121 ttcctatctg gctctaccgt taggaattaa aaatgaagca ggcaagatat cctgacccgc
      181 tccagccttg ctaatgctcc atctacaaca tttctaatta ggcagaaatt catgtacttc
      241 agctaagtgg taatgaaaag tgattcattt gctgaataag agatgagagt gagtgtaatt
      301 agctgactgc ggtttttaat ctttcaacaa ttcaatgtgt ttaaattagt ttcaaagaat
      361 aggagctttc aagtgttgtt acatcaaagt aatcaaggca gccttcaacg gttgagtagc
      421 ctgttctgaa acctctacac ttaataatca ccttcaaacc ctctcgttgg aacagatggg
      481 aaggctcaga ctcgttcaat gtatgcagaa ttgtggtggg aaggaggcct tccagggggg
      541 ctggggaaag ctaaacctga gtcagtgttg ttatcctagt gctcctcagt cct
//
LOCUS       KCPA01003879             338 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 427595tic ultra-conserved element locus
            uce-6552, sequence.
ACCESSION   KCPA01003879
VERSION     KCPA01003879.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 338)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 338)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="427595tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>338
                     /note="ultra-conserved element locus uce-6552"
BASE COUNT           99 a           54 c           69 g          116 t
ORIGIN      
        1 tctttttaaa gtttccaacg agccaggtta aatattctgt aatcagtgta ataatacacc
       61 tggactcgct cgcgagatat ctgccttttg tactgagaca ggacattaat agtaattatt
      121 ctgctttgta attggagctt taaatactaa ttcaaacagc cagaggaaaa ccaattagtg
      181 ctaatttatc tctatgtgtt ttggagagcc tgtgtctgtc atactgtgaa gaaataggtt
      241 ggtaattagt acagttgggt ggtagataga agtaattatc agattctttc atgttcttta
      301 aaggaatcta aaggctgcat gactcttcct ttccgagg
//
LOCUS       KCPA01003880             467 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 427704tic ultra-conserved element locus
            uce-3925, sequence.
ACCESSION   KCPA01003880
VERSION     KCPA01003880.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 467)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 467)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="427704tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>467
                     /note="ultra-conserved element locus uce-3925"
BASE COUNT          116 a          115 c          108 g          128 t
ORIGIN      
        1 gacacctctg caagagcttt tatattaaat ttattagggg tgttgtcact gaagagaaac
       61 ccgcgtctta gccatggggc ggcagccaag ttcccttttg ggcagagcag agtctcgaag
      121 tctgcttgac atcttgaagc ttaaataacc gtaaggcatt gttactccct ggcagcaaag
      181 tgcctcgtta cgcctgattg agctaattgc tttgaaatag gatatattat ctataattat
      241 agagatcttg gaggagacgg ccagcctttt ctttcatctt ttccaagtgc atcataatgt
      301 cgcgatcaaa ttaatttagg ccacttgaaa tagtgccttc ctttcagcct ggctcctccg
      361 accctcaaag agccggggac ccctcggcga ctggagtttg gccatccaaa cagctcctgg
      421 tgacctcccg aggaccagtc caggtgcccg aagccttaaa agtagtt
//
LOCUS       KCPA01003881             630 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 427810tic ultra-conserved element locus
            uce-7684, sequence.
ACCESSION   KCPA01003881
VERSION     KCPA01003881.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 630)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 630)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..630
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="427810tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>630
                     /note="ultra-conserved element locus uce-7684"
BASE COUNT          159 a          130 c          159 g          182 t
ORIGIN      
        1 aaaggctgtt ctgcacacag ataaagtagg cacgctagcc actttattac aagcatgggt
       61 attattcgca agtccctcgt tcctgtcatt tgcccttgac tgcagtatag catttactgt
      121 aaggccatga agaatccata tgtctgtgtg atctgtcagg ccaccaagat gccagggctt
      181 gtgtggtagc ataaggatat ctgaaggtga cacgtgctgt catctgatga acagagatgc
      241 agaattctgg cagccactac cttggccttg acaacttgtg atggtgacca ggtggggtgt
      301 gttatcttaa tagtctgtag ctcttgtgaa ttatttggtg atagatgtaa acagctgtta
      361 ttcttggtaa tggaaagcaa ttagaaacat ctgtactctt gtcgatgagt aatgcctccc
      421 atcttcactg ctcccaagtg ccaatttgaa ataactacat catcaggatg ggctggcagc
      481 cctcactgca ttatggcctg gtttgtactg agctgtgaag aacaagaagt gaagcacagt
      541 ggaaagcttg cttgagtttg tttcctactt cagcatgagg gaagccaggt gctccatagc
      601 tccagtgttc aggagtggct tctggagctg
//
LOCUS       KCPA01003882             855 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 427919tic ultra-conserved element locus
            uce-393, sequence.
ACCESSION   KCPA01003882
VERSION     KCPA01003882.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 855)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 855)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..855
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="427919tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>855
                     /note="ultra-conserved element locus uce-393"
BASE COUNT          255 a          168 c          172 g          260 t
ORIGIN      
        1 atttcacatt tactctaaga aagttcatgc taaattgagt ttcactgctg tcagtatctt
       61 tattaatcaa aataggagaa gtatggtgtg tttcccacct ttttgcacaa gatcgatttt
      121 tacagcaaga cttccctttt cttttcttgg agcgacatgg agagttatgt acgaggatat
      181 caagtcactg acttcaaaca gaagacaaat tcactaaagt gaaaatgatt gtgatagttc
      241 tctaatttcc cccacagtgt atgtaaaact gacttttaaa gtgtttagtg gataatggat
      301 catgtaaggt cagtactagc catagctgtt atggctatta ttttctcctt tcatgggagg
      361 gtgctcagca aaatgagatt gtcacgctct ttttttttga gaggacagcg acagacagtt
      421 aaaagcctct tcatgtaagg atgttatttc ataaagacac cagcactgga ttatcccctt
      481 cactttaaac ttctgccagc ttgtacaaag agataaaaca aaatagcccc aatcccaggg
      541 gtggagaagt gctggccaga tctgcccatg tccacagctt tcattttgat tagtcacatg
      601 tgaggaaaat tcacttaggc tgagaggtaa atttaatacc agttatgccc atgctgttca
      661 tatcacaacc attttcacat gatgccactt aattccctaa gaagcagaaa ggtaaatcgg
      721 tggctggcca gctaaggtgt cataatgcat taggaccagg gctcgctgca ggggataatg
      781 gttctgattg ctgttgactc atgtctccac caactgcctc atgtaaaata agtgacattt
      841 aaaaggcatc aagat
//
LOCUS       KCPA01003883             639 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 428029tic ultra-conserved element locus
            uce-4465, sequence.
ACCESSION   KCPA01003883
VERSION     KCPA01003883.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 639)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 639)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..639
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="428029tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>639
                     /note="ultra-conserved element locus uce-4465"
BASE COUNT          189 a          106 c          142 g          202 t
ORIGIN      
        1 aaatctgttc agtctcacgc ctttgtttta ggttggctaa accctcgacc cttattcttt
       61 gtggggtcac gctcaggcaa ctgggcagtg ctgaatgagt taagtcgcag gctgaagttt
      121 ggcttcatgc aactaaattt gaggcctggt aggcattagc agggcacagc acatttacag
      181 agcttaatta gtacgcgctg taattgttca tggtctgcca gaaggagtaa tgttcaggaa
      241 aagtggagtc gttcttctgc agtctttagt tttaaaacga taaatcactt gcatatttgt
      301 gcagtgattc aaatggagct gagacctctc catctcaaca tgtggtaaat tgtaaagtca
      361 atgaattgca gatgtagggt acagcagatt ctctaagaaa atgcagaatg aatgggaacg
      421 ggtgatacta taaatacgaa ctgagcttgc tgtgccaaat atgataaact aaagatatta
      481 gcaattttgt tctaaatgta tttattttaa atatctttaa actatgtgta ggggtaccat
      541 gttacttcac tcagtgaggt ttctattaat gttccagaac aatgggtttc atatggaaat
      601 gcgcgtgata gccatattaa tataaattaa ttcatcatg
//
LOCUS       KCPA01003884             509 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 428137tic ultra-conserved element locus
            uce-2190, sequence.
ACCESSION   KCPA01003884
VERSION     KCPA01003884.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 509)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 509)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="428137tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>509
                     /note="ultra-conserved element locus uce-2190"
BASE COUNT          123 a           88 c          103 g          195 t
ORIGIN      
        1 tcccttctaa aaattgtagc tgaggttgta gtgaaaagaa ctgtgtttct tccctccctg
       61 ttatgtttgc ttgctttgtg ataagagttt ttgtatgctt tactgtgact gagggctttt
      121 tttcctcctg actggccata tagaaccatg agcacataga agaagtgtac ttggagaata
      181 gctgtggtcc tctgtggagt tgttgccaaa attccttttt cttctgccat tttacttcta
      241 tggttgttga ttatttgtct gaataaatct ggcagctgtt tgctatgttt aatagagcag
      301 aaaggctact ctgaataaag ctatttgaaa atttgtttat atgaagtatt tgtaaatcca
      361 tgaaggtctc ttggcatttc tctatcgctc gttctgtctt cctgaattca ttctttgatg
      421 caggactttg caggctggca aatttactac agatatcagc tgtatcagaa tattcttgga
      481 aacagaggtc tcaattctac attttgcat
//
LOCUS       KCPA01003885             719 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 428247tic ultra-conserved element locus
            uce-276, sequence.
ACCESSION   KCPA01003885
VERSION     KCPA01003885.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 719)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 719)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..719
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="428247tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>719
                     /note="ultra-conserved element locus uce-276"
BASE COUNT          231 a          128 c          148 g          212 t
ORIGIN      
        1 aataatccct gagacgctta ttttagtaaa tgaatcagtc acactgagcc aaggaaggga
       61 gccatctatt accgtgctat aaatgttaaa gaccctatta agagccttta tctctggaag
      121 aaacagagcc atttttgctg atatttgtac gacaacaata atggtacctc actaagttgt
      181 gagtagatgt tacaattgca gttttctcaa ttcattttca gtggtcatca gggaaattca
      241 tgtaaaacaa ccaaaaacac atagatatgt ttgcatcata ttaataagaa gagaaagcaa
      301 ggtagctgcc aattggcagc agagtatgtt ttggtggttt gataaggata ctaaagagtt
      361 tatgatgtga cagatgtttc actacactat tgtgaaatga atagattatg agaagtaatt
      421 agatgtacat tggaatcaat gctgttatca tcgaggcctt cgggcgatgc aatagatgag
      481 agtcatggca gcaggtggtc caatggctcg gagacaggaa gacacaccgc aggagactga
      541 gtgacaggtt tcacagatcc agggggtgag agatctgagc tattgcctgc atttgtaatc
      601 tttactcatg tataaataat aacaactaca ctattgactt catatgctat gtcataccct
      661 cacacatatg cacacattct gcaacttttc ccctcagtta aagctattct tttattttc
//
LOCUS       KCPA01003886             818 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 428359tic ultra-conserved element locus
            uce-5916, sequence.
ACCESSION   KCPA01003886
VERSION     KCPA01003886.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 818)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 818)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..818
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="428359tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>818
                     /note="ultra-conserved element locus uce-5916"
BASE COUNT          242 a          142 c          150 g          284 t
ORIGIN      
        1 tagagaagtc ccttatgatt taaataaagt ttgtcatgtt ttacttttat tggcatgtga
       61 attcttcaag gataaaatat ctgctaaatt tctccatttt ctctcattgc tacttgtatg
      121 atgaagcatg atttgcagta tttaatgtaa ttggagtatc attaattttc tgctaaaatg
      181 tttctgtata tggccatgca aaataagtat ctaccatacc atcagttgct taaagaatca
      241 aaatgaggat tttttctaaa gaagatttct ctgaatcttt ccacccacag gctctgttga
      301 aggcagtaaa tagtccattt ttgttaatga agcttcactc atacagctgg gattgtttaa
      361 tattttacga gtgttacttt gttttgctct caacgatctc aggcagttaa ggatttatga
      421 atcgtgtttt tctcagccca tctgcggttt cctatcttcc ctggccttga gaatatgttt
      481 aaatttatta aagcgaagca aaggctcatt atttcaaagg agagccaaag tgacacagtg
      541 aattggttat taatggaaag gcactgccat agggcgattg aaatttaatg atatcctaca
      601 agaaaaaaat gagggtgtca ctttccaaaa agtcatgcta aatgccagcc tttttaaggt
      661 cctgccgcta attttatgcc tgcacacagt aatgttttca aaagcgttta ggaaacacgg
      721 accagtgact gtactgatta tccttttcac cttctcgcct gttccaaatg ggtttgtgca
      781 gtgagcgatt taatctctaa atatagggaa cgttaaaa
//
LOCUS       KCPA01003887             491 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 428466tic ultra-conserved element locus
            uce-2625, sequence.
ACCESSION   KCPA01003887
VERSION     KCPA01003887.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 491)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 491)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="428466tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>491
                     /note="ultra-conserved element locus uce-2625"
BASE COUNT          181 a           83 c           66 g          161 t
ORIGIN      
        1 aaacacagca aaaattaatt acaattattc atgttcttga aaatgacagt acatgacaag
       61 gaagaagggt cactattgct cacttctttt ttagaacaat ctttgtttac ctagttccca
      121 agtgttaaga gccagtacgg tacatttgca taggataact aacatatacc acaccatttt
      181 cacgtctgca agtacacgtg agtaaccgta attacacgtg acaccaatta ctctattact
      241 ttgtattaaa ttataatgga aaattccact agagaattga agcctaattg catcttaatt
      301 tgcatatttt tgcatattaa ttacatctca gatgaataat aaatttcagc agatttttaa
      361 tttatgcata gacacaaaaa caagtggaga aataatttac aaaaaaatac cagcaactat
      421 tacttagggc attcaactaa ttttgcttag tttagcaaaa caaaacttgg tttgtttaat
      481 atagcatctt t
//
LOCUS       KCPA01003888             555 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 428576tic ultra-conserved element locus
            uce-700, sequence.
ACCESSION   KCPA01003888
VERSION     KCPA01003888.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 555)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 555)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="428576tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>555
                     /note="ultra-conserved element locus uce-700"
BASE COUNT          135 a          131 c          103 g          186 t
ORIGIN      
        1 cccatcccca cctaattttt tttctttcat ctatggtcag attagcaagt cagcactgtc
       61 aataaataaa ctagagaagt tgtttatttt tatgtactac tgagaacagt gtcgtcttgt
      121 ggccgttctc gtagactgtg ttggtttaac aagcgtccaa cccttttgtc ttgttgtttt
      181 ttgtctttcc tgctccctgt ccccttgttc ccacaggctg tgcgtttgtc acattttcta
      241 caagggcaat ggcacagaat gcaatcaaag ccatgcacca gtctcagacc atggaggtac
      301 agtactgtat catttgccct ttctttgttt tctttgtgca aatgattgcg aatggtaaag
      361 ccatgctctc ctggatcaga tcagacacat gacaatcaca gatttaaact ttttaccagc
      421 tctctctgcc tgtctttgtg aatttttctc aatcacctga aagagcacaa taaggctgct
      481 gtgtggtatc caaactcggc tctcaatcct gttttcagtg gcattcggca gaaaataaaa
      541 atgccatgaa tgcca
//
LOCUS       KCPA01003889             802 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 428687tic ultra-conserved element locus
            uce-6782, sequence.
ACCESSION   KCPA01003889
VERSION     KCPA01003889.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 802)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 802)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..802
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="428687tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>802
                     /note="ultra-conserved element locus uce-6782"
BASE COUNT          274 a          155 c          130 g          243 t
ORIGIN      
        1 tgtctcctat ttaactctgg gctgtaaaaa agggaaaatt aaaaaccatt atgagacctc
       61 catataatta atcttcagat ggcttgaagc tcaagcatgt aatgtcctca gtatactgtc
      121 tactataaca agtaacagga gggaaaaaaa gacgacatat caatacactt tatccaaggg
      181 aagaaattcc agttgtagca ttaaatataa atacaatagt gtgttggcat aatgtagtaa
      241 ggttcctgta ctattaaagg ctttgttcta aagcatatct gtgtacacaa tgagatgatg
      301 aacacagtgc atcacatagc taaatttaat atatgcaggg gtatgatgtt tgcaatgcat
      361 gcatttcagc aggtcccatt agtgcgcctt tcccctccag tgaaaacaga atgaaccaca
      421 gccccttctg gtttgcataa agcaaacaaa attagatttg ctttgctgaa ttgaaacccg
      481 cttgggattg tgagcctctc tcggggacaa attacttcaa acaatccctt tgtaccataa
      541 caaaatcaaa aaattcaggc caatcaacat ggctcaaaac ccttaacaca agaattaata
      601 atacaaccta gtctattttt attgcttctg agctacagat ccttgtttta atataattac
      661 acttatttgt ggtccacatg ttaaataagc ttgcatatgt taactaatgt gacataaaac
      721 aacttttgta atttcactgt tgctaccagt tttgttcccc ctagagtaac atccctaaca
      781 taggaaactt taattgcatt aa
//
LOCUS       KCPA01003890             808 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 428798tic ultra-conserved element locus
            uce-7912, sequence.
ACCESSION   KCPA01003890
VERSION     KCPA01003890.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 808)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 808)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..808
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="428798tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>808
                     /note="ultra-conserved element locus uce-7912"
BASE COUNT          241 a          151 c          152 g          264 t
ORIGIN      
        1 aaacagcttt taagggattc cagcactaaa tcctatatag atagcaagaa atgtttactt
       61 gaggaagaaa agctttgcat tttggtacca aaataaagag atttttcttt cccaggcagc
      121 ttgcctttgg tgaattagca agtcaactgc tgtagttttc agaacttttc caattccagt
      181 gccagggtgt aagtgggcat tgcaatgcta catagcaggt tttattaaag ataataagta
      241 tggaaccagc tagtttttta cttctctaaa tacatagcac ccatagtttt gaaagtatat
      301 gcatttctaa aatgcctctt ccgtatttat gctgtggcta ccacatttgt ataaacagaa
      361 aattgctcca ttcatgcttt attagctctt cttttgtacc acagccttga cctcagtcat
      421 catgaattga gaaatagtgg ggaactaatg gagacagatg ggaatatggc ttgccattta
      481 ctcaaattgg taaagtaatt aacctcaagg tgctggtttg caagaaaaat tgttggaata
      541 tctcagagcg ctggtaaaca gactcctgct ttaaccactt ctgacaactg catcataaac
      601 tagacttatt ctgttcaatt gacctgtcaa cgtcctgagt ccaaataaag atttgtatta
      661 caatgcactt gctgagaagt gggagagcac tactgctgtt tcttttcaaa tgggttgctg
      721 ttcttaccct gctagatagg agctggaatg tcatatattc atacttcagc cattatattc
      781 cttagaaaac ttccattact gattgtgt
//
LOCUS       KCPA01003891             631 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 428905tic ultra-conserved element locus
            uce-6874, sequence.
ACCESSION   KCPA01003891
VERSION     KCPA01003891.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 631)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 631)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="428905tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>631
                     /note="ultra-conserved element locus uce-6874"
BASE COUNT          153 a          168 c          139 g          171 t
ORIGIN      
        1 aggaaaggac tgtattttag gctgtttgca ataggattca cctcagcaaa tatctgaaac
       61 tggtatttac ttaaggtttt tcaattacat ttctcaaagc agcaattaca caatttttgc
      121 aatatattcc ataaccaaat attcactctt ctgaaatacc aaacaagcct gcacccacat
      181 gcagcactcc agtctgagat cactctactc ccactggtga aatcctaagg ttttggaaaa
      241 gaaaagccat ctggtttgcc agcagtggca caatgtcaga aggaaagcgc agagattctg
      301 ttttcacccc cgagctcttt ctgtcctgct gctgctacct tatgttcctc cgcatgtgag
      361 acggtttctg agccctcttc tttttggtgt cctcagaggc caggctcttg tgctggttct
      421 gcaagagttg ctctgcccgc tcgctctgag atgaggtagt tgaagtcgag cgctgccatt
      481 ctccatcctc cgcgtgctcc gcacggtcac cgctgaacgc ggcttcctgg ggctggtctg
      541 caaaaggaca tgacatggca acagctgtgc caggttcaac gtgagcattc agcaggatct
      601 gagccaaaca ggagcgccct actctcactc a
//
LOCUS       KCPA01003892             433 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 429011tic ultra-conserved element locus
            uce-5372, sequence.
ACCESSION   KCPA01003892
VERSION     KCPA01003892.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 433)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 433)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="429011tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>433
                     /note="ultra-conserved element locus uce-5372"
BASE COUNT          149 a           51 c          119 g          114 t
ORIGIN      
        1 aaggagttgc ttgtggggca tgtcagcttc tctctgctgc tttgggttca ctgtacttgg
       61 gaaaatggta gaggagttct gagcatctca ttataaaagg acatagataa atctgaaagg
      121 atagagggaa gggtgacgaa aatgatgtat tgcttgtaga aaaggagact atgggtggat
      181 ataaacagtc tataaatatt tgagaggtaa taatatgaag gagggggagg gattatttac
      241 agtgcttgag acagcataac aaggagcaac ggcttgaaac taaaaaaggc aaaattaaat
      301 tagacactag acactctttt cctaactagt agtgcaatta gcaatggagt gacctgcata
      361 aggacaaggg gataagtgaa gcataatcag aagaggtgtt taagggtgtg ttagattatg
      421 atctcaagtg att
//
LOCUS       KCPA01003893             706 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 429229tic ultra-conserved element locus
            uce-7219, sequence.
ACCESSION   KCPA01003893
VERSION     KCPA01003893.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 706)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 706)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..706
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="429229tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>706
                     /note="ultra-conserved element locus uce-7219"
BASE COUNT          209 a          144 c          125 g          228 t
ORIGIN      
        1 ctccttgccc cgaagagaat tcccaaccaa tcagttcaac ccaacctgag ttccaccgga
       61 gtgcaaacaa cagcactaac ttttctaatt tcatcctcta gtactcccaa gtaaataaaa
      121 aaaaagtaaa gttttcctac aaatagaaac tgtcacttac tgggatgtga tcttttcagc
      181 tcatgcatcc taaatgcatg cagagatatt atatgcactt tctatttagc aatttaatta
      241 tatctttgca gtcagagagt ggcaatggtt tgcagtaata atcaggtgaa agcattctca
      301 cattaatatg ctggaatccg atgtgttaat ttgatgcaac tttgcgttga caatatgtga
      361 ttaatttgtt cccaggctcg ctctgctccc ggcgctgaca gctccaaatg ctgggtttct
      421 ttatccatat cactatttga cacgccttag cccactgctt tgctaggacc actgttaatt
      481 tgtaatgaac tggcttttca gggggctcct tcatttttaa ttctgtcagt gtcacctcct
      541 tgaagaaaat tataagtttc cttaggtgtg attactgcca agtgctgctg ataagaggtt
      601 tgagaaaaca gggttttata aagaagtcag tatttaatct gctgaaacag atttattgcc
      661 tccagacaga taaatataat agaaagttct ttcatttaaa agtaat
//
LOCUS       KCPA01003894             673 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 429340tic ultra-conserved element locus
            uce-6579, sequence.
ACCESSION   KCPA01003894
VERSION     KCPA01003894.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 673)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 673)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..673
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="429340tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>673
                     /note="ultra-conserved element locus uce-6579"
BASE COUNT          206 a          137 c          131 g          199 t
ORIGIN      
        1 tttttcacca ccataaaaag ttcacaagtt aggaggtaat tgcattagca cgctgagaaa
       61 agagaagaga atgcaagaaa tcctgattgg cgtttctctg tttaaaagga attattttcc
      121 aatacctgag catgcccaga ggagctagtc tctgagcagc tgtgaaacag aaccttttta
      181 cttcagggtt agtgcaggga gctcattagc acagcctcaa ccctcagcta aacagccttg
      241 tttgcatatt gaagcaatag aatgtgaagg tgttaaaaag gaagaattgc agccgctact
      301 cctgactgac atgtctatct gggctcttgt gtttacaaga gaataacgaa gctgccccaa
      361 agcccctact gggcctgatt attatgcaga ggcttcttag attatgtata attgatatcc
      421 attttccctc cagctaacca atggcagctc tcaggagtaa tgctcactct cctgcatctt
      481 accaagcaag caaacactag aaattgatat cttttgctaa gcttaataat ttttaaagac
      541 caaaaattga catttacatt tttcagaagc acagattact gcactcttgg tgtggctttc
      601 cttctaatag caatcaaaca gtgaagatac tgtatctaag gatgattggg gctatgttca
      661 tttctatata ttt
//
LOCUS       KCPA01003895             726 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 429452tic ultra-conserved element locus
            uce-5098, sequence.
ACCESSION   KCPA01003895
VERSION     KCPA01003895.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 726)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 726)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..726
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="429452tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>726
                     /note="ultra-conserved element locus uce-5098"
BASE COUNT          200 a          168 c          157 g          201 t
ORIGIN      
        1 atgcacctga cttcggtaaa acttcagcaa gctcctctgc tgcctctgtc gatagtgcag
       61 tttggtctgg acctcattgg attaaaggtc ctaggaagtc acccccttat tttaagagaa
      121 aggctacttg tgcgagcaga gttagctcta tttataccct gcctctgtta acaagtcaga
      181 aaaagtaaac ttgatttctt tgacaggcac acgcttccta tgtcctggtg gcagtcagac
      241 agatttgttg caagaaaaaa aagctggaaa gagttcaaaa ggctggaact ggcatggtgg
      301 gacccctgca tgtttctgaa tgcagggagg ccttcttaac ccctttagac ctaaagtact
      361 tccctatgct aagaatggca tttacttctg aaaggggact tgtctaagta acccgcagtc
      421 aggggatttc cccacagcaa ggggctacac aatcacttgc taaaaggaac aaataatagg
      481 attgaagcaa ttaaagccag ttttaacaaa ggaagcataa cttatttaaa cttaggatca
      541 acaaagcaga tgtcttcgta acttctccca ggctcctccg ggttttttct tctctttggt
      601 tgggagattt ccacgatgct aagtttaatg ctgccttcca gtcccaccag ggagatgtta
      661 aaagtgtccc tgaattcctc cacatttcct gacagccaga tcccattgta cggtgcattg
      721 ctgacc
//
LOCUS       KCPA01003896             389 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 429561tic ultra-conserved element locus
            uce-2848, sequence.
ACCESSION   KCPA01003896
VERSION     KCPA01003896.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 389)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 389)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="429561tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>389
                     /note="ultra-conserved element locus uce-2848"
BASE COUNT          113 a           89 c           69 g          118 t
ORIGIN      
        1 cagcgactaa attaaaaaat ggtatctgga ataaatttaa agaccaccaa taaggagttt
       61 tctaatgaaa ataaagacaa attatggaaa cctggaaccg agctactcta attttttctc
      121 ttctgttttc aaatgtattt tccagagtgg atcactaaag gagccagagc caaacaaaat
      181 cccacctcag cgaccaccac ctcaaggttg tttacagtac attctcgact gtaatggcgt
      241 tgcagtagga ccaaaacaag tccaggctac ttaatgcaag catcccagat tgtttcagtg
      301 ctgacctgga ctgtgttttt tctatcaact ctcccgtctg gttgtttcct tgttcctgtc
      361 tgtgcgtgta atttccaacc ttcctctgt
//
LOCUS       KCPA01003897             709 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 429672tic ultra-conserved element locus
            uce-3055, sequence.
ACCESSION   KCPA01003897
VERSION     KCPA01003897.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 709)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 709)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="429672tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>709
                     /note="ultra-conserved element locus uce-3055"
BASE COUNT          250 a          109 c          128 g          222 t
ORIGIN      
        1 aggattaaaa tctaaaacca gatatttcct taataaattt acagaattag aacaactgga
       61 catagtctct gttttcatgg ctgcaaaatg attggattct tgtctcatca aatttacatt
      121 gtagattctg aatatagtat gattagacat tattttaaca actacattac aatacaattt
      181 aaaataaaat ggtcctttat atcgcactaa tatcagtgtt ttaaataaca aaggggacaa
      241 ataaaggaaa ggattagcat ttagtttcaa tcagtataag caatgctgta ccagttggtg
      301 tctcaaagat tcagaatttt attaatattc cagagatgca tttgtgttgc ctctgggtac
      361 actgaaaagc cacttaaact gcacttaaag cagcactaca ggatcaaatt gatgtgcatc
      421 aaccatttac aataaaactt gattattata aaggcataca tatttgcata attacatgtt
      481 tgattttttg ataatgcagc acacactaca aaatgttgct tcacgtagaa aggcatcgtc
      541 aaaaagcacc atctgctgta gtatttaatg cactgcaatg tttgaaaaat tctgaaggta
      601 gattggtgca aatcaaagga gaaagcaagg gagttttgct agaacaaggg ggatgaagga
      661 ggggacacag tacagtgcgg accttttgtt tgtttctctc tggcaattt
//
LOCUS       KCPA01003898             701 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 429783tic ultra-conserved element locus
            uce-4535, sequence.
ACCESSION   KCPA01003898
VERSION     KCPA01003898.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 701)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 701)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..701
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="429783tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>701
                     /note="ultra-conserved element locus uce-4535"
BASE COUNT          191 a          148 c          140 g          222 t
ORIGIN      
        1 tataaaatta tcttggtgtt gatggagctg ggagttgctc agagcagcct tgagaggcct
       61 ggagttcccc tggaaaagca gcaaagcaag ccacatattg taaagtaaca agaagaattt
      121 ttattattgc ttttgtattt ttcttaccat tttgatcaga tgtacattgt ttataacccc
      181 tcgtttaccg gccccaaata tcattacaac gtctgcaccg tgatctatgt ttggttgtta
      241 cccttttaat ggataaaaaa agatttaagt acttcattct gttgcatttt gacagctgtt
      301 agccatcatt tttccattca cctgcattta gcaatcccat aaagggaggc aatcttagaa
      361 ctaacaagag ctgggcactg caaggtgata attctgtatc actttggcct ataaatacct
      421 gccaggctgg ggctgagtca gcagtctgta acaaagtggc agccgtgccc ttttatctgt
      481 gtgagtgttt cacagcaatt ggactatcag cccctgcagt gaaaatccat agtatcgatc
      541 aaattctttt gtaggaaatc cctgatgaca aattttatct gcaccacttt ttgattgctg
      601 gtttgatgta agcgatctcc aagggcagag ttaagctcct ggccgttcca cattatcaag
      661 caccagcttt atttactgaa actacacttg tggtcaccaa c
//
LOCUS       KCPA01003899             363 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 429888tic ultra-conserved element locus
            uce-1334, sequence.
ACCESSION   KCPA01003899
VERSION     KCPA01003899.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 363)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 363)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="429888tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>363
                     /note="ultra-conserved element locus uce-1334"
BASE COUNT          136 a           67 c           53 g          107 t
ORIGIN      
        1 atgtatatta atacagaaat atattgtgaa actgtcctta aacaaacaaa tgagccactt
       61 taaaatatta ccgctataaa tgaccatgac agtagcacag cacatataat aaaaaataac
      121 tactgaagag aagctgctga attactatag taataaacca gatgtgatta ttatcattta
      181 acacagtcat tgaataccat gaatccctga agccattaaa atatttatga ttaaacgttt
      241 gctattcttt agaacagaac atatagtctg gtactaaggt attattttgg ctaatacatg
      301 ctcgtgccat gataaaggtc agccagcctc ctggaaagaa cacctagcag ctttcctcct
      361 tct
//
LOCUS       KCPA01003900             572 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 429999tic ultra-conserved element locus
            uce-6724, sequence.
ACCESSION   KCPA01003900
VERSION     KCPA01003900.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 572)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 572)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..572
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="429999tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>572
                     /note="ultra-conserved element locus uce-6724"
BASE COUNT          199 a           72 c           85 g          216 t
ORIGIN      
        1 acttcacaaa aataaaaaaa gtggatccaa ttatttgaaa gtttatgatg tatataaaat
       61 tctaaactat taataaatat atctgataaa taatgatgat agtctccata tttctttgtt
      121 taattctcag ttttcttgca agatattctt gaagtttggt tgtaatggat cattacgtcc
      181 ataatgtgct caatgttgga gtgaattttg aacagttttt cggctgcata ctgttttctt
      241 ccagataatt tactggatta aaattagcag tgtgaaaagc tgtagagaaa tctaaatgcc
      301 tgccaaatca aagaaataat cacattttta tgaatattta atatcatagt catggcaaat
      361 aaggcaagta attagtactt accataaatt tgcaaagtat tattttatgt aaatgttaca
      421 ttctactagt ttgatatgaa ttattcattg tattaccaga cagtgacaca aaccagcaaa
      481 cactaaaatc tatgtgttat tagtttactt acctttaatg atattgttta gagggtattt
      541 ttttgagatt actatgtttt cccaaatggg at
//
LOCUS       KCPA01003901             868 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 430109tic ultra-conserved element locus
            uce-2116, sequence.
ACCESSION   KCPA01003901
VERSION     KCPA01003901.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 868)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 868)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..868
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="430109tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>868
                     /note="ultra-conserved element locus uce-2116"
BASE COUNT          224 a          175 c          200 g          269 t
ORIGIN      
        1 tccagcaggg aaacatctcg ctgcatgccg cacaaaatcc cgccggataa cgcaagaggc
       61 ctttttaggt gctgctggag caccagtctg accagtaaca cacagttcac tgaatcccta
      121 attccagttg ggaagttatc tgctgtctct agcagtgaaa tcctgactga taagcgaaga
      181 ggctcatctg ctggtagcag agcctccagt ttatcagtgt ctgaccagct cataaatcag
      241 actggtgtct gtttttattt tgttttatca aaatttattt ctatcattgt aacagttaat
      301 actttaataa gagaacttag ctgggaacat taggaagtta gttagagaca ttttgcaggc
      361 gctttttccc ttgtcagtga caaggtaagg taatcctata cacaggctgc tattgtgaga
      421 tgagaaactg gcctccttca ctgccagaga ccagatgcac ctctctctat cctaatctgt
      481 aaacgactta aaggagcctt atctcggggc tcttctgctt catttcatgc ttgatttact
      541 ttaatttgtc tgatagggca caaggatttg gagacggccc atctttctgc agaaaatgtt
      601 cagatttttt ttccttggca ttgttgtgtt gggggttttg acttttttta tgtggaggaa
      661 atcttgctcc agtgcagcaa gctgcttgag tgtgtttaga tttaagctac cccagcagaa
      721 aagagtttgt gaagtggtat gattgtgtga tgggccacat ttacattgaa atcacattat
      781 acgatatatc tggactcctg aagggagcag tgcagtggag cgcttgtgcc cacaagatac
      841 tttgaaaggg ctatgtatag tggcaaca
//
LOCUS       KCPA01003902             711 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 430217tic ultra-conserved element locus
            uce-4908, sequence.
ACCESSION   KCPA01003902
VERSION     KCPA01003902.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 711)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 711)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..711
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="430217tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>711
                     /note="ultra-conserved element locus uce-4908"
BASE COUNT          204 a          120 c          146 g          241 t
ORIGIN      
        1 tttggggtcc ttcagctgtc attgttttcc agtgcagtga aatgttgata ataatctacc
       61 atatgcaaga attataaact aatgctgcaa gatttatgcc attgtgtgct tttaaaatcc
      121 tgtgctattt ttgcgcatgt tcttcagctg ggatggaatc gtatctataa cagtatgact
      181 aattatcttt gcatgcattt atcactaaat aaacctcaca caagacagca agattgttta
      241 cttaagcagt ataatactgg gaatggaaga tagctctaga acataggatt gcgttgccgg
      301 aatggcacta tttattaagc tatgataacg ctaatgttcc tttttgatgt atagcatgtg
      361 tgacttcagc tgaacttgta gagagcctta aggatgtttc attgaacatt tagtatggca
      421 gcaagccaga atacatttag cctaaaccca gatgacaggt tggtaatgag gtagtgattg
      481 atgaccactg cttccatatg aaaacctgct tgatatgcta ggggggaaat gcattgctag
      541 ctctttttat ttcattccct ctgtattagt tattcttact atagaggagt agcattggct
      601 gctggttatt caatcctggt ttcacttttg gatgagaatt gagtactcag ctgagattgt
      661 agaagcacag cctcaaatcc caatttcagt ggatttttat tgtcaaaaat a
//
LOCUS       KCPA01003903             459 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 430328tic ultra-conserved element locus
            uce-3079, sequence.
ACCESSION   KCPA01003903
VERSION     KCPA01003903.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 459)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 459)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="430328tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>459
                     /note="ultra-conserved element locus uce-3079"
BASE COUNT          129 a           90 c          100 g          140 t
ORIGIN      
        1 tgcagctgcg gctctccaat tcggaaacat tttcaaatct atgagccttg aatggacaaa
       61 tactcactat taatatggga catggacgag tggcaaaaaa gctgaatgga aactgtgcgg
      121 tagctttagg agaaactaac gatgtgcttc agctcttgcc attacaggga aggaaagagg
      181 gggaagcccc ttctgattaa taactagcag ggtaatgttg agggcttttt ctgcccgatt
      241 gcctttttga attagagccg atttcttcac acttcaatag ggcctgtctc ttttaaaatg
      301 actgacagat ttgtttctcc ttttttctct ccctgagact taatgatgta aattttctaa
      361 ttagttaaat cacgttgctt aaaggcctta atgtttaccg ggcaaggaat gatagccgca
      421 ttcggatctc tcgaaataac cagcgaaatt tttacagcg
//
LOCUS       KCPA01003904             531 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 430539tic ultra-conserved element locus
            uce-5174, sequence.
ACCESSION   KCPA01003904
VERSION     KCPA01003904.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 531)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 531)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="430539tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>531
                     /note="ultra-conserved element locus uce-5174"
BASE COUNT          157 a          105 c          116 g          153 t
ORIGIN      
        1 acttggatgg tgtacatagg aatgagagct gggtgggact gcgaagaaca ggagaaagtt
       61 tttatgtatt gcagatcaaa atcaaaatac tgaatgtgca aagggtcagc acaagcccca
      121 gtaagaccag taaggtctct ggtgtttttc aaaatggtgg aaagaattct gcacagatgg
      181 gcttggtagt atagttgtac gagttcatct tcccttccag gtgcaagtgg gaagtacacc
      241 tcaggaccaa agaattgtgg gatacatttc ctgcactcac ttgcaagcta ttgcaggtac
      301 tgtcctaaga ttcgtatctt ctatttccag gcctttgtgc aaaaataaga gttgtcctcc
      361 tgtgtttctg acagtcaagc gtatgctgca aacccaaccc ttcacatctt cgtctctttg
      421 ctccctctta accaaatact ggtattttag cgttgttgct caagaacatt taataaccca
      481 agtatcagaa tataaaaaaa atttctttgt acggggataa tcagaagact a
//
LOCUS       KCPA01003905             625 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 430648tic ultra-conserved element locus
            uce-3282, sequence.
ACCESSION   KCPA01003905
VERSION     KCPA01003905.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 625)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 625)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..625
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="430648tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>625
                     /note="ultra-conserved element locus uce-3282"
BASE COUNT          196 a          123 c          130 g          176 t
ORIGIN      
        1 aaagaacaaa tgtatgcctg taggccaaaa tgcagaagct tgggactctc cctccaactt
       61 acatgaaatt tttacaatga attgtaatag gaggttcaga tgacaaaatt acagtggtgt
      121 agccaagaaa aatacccatg gggctttctg cttcccttgt gcccagcctg aactatcaga
      181 tcagccttct ggactcgaat gcaacactgt caataggaat acatcatctt ttttgtggta
      241 tagaagagct gtcggttgca attcccatta ttccaaggcc aggattttcc attagtgtag
      301 ccacctgctg ggtttctcta ctcaggttta atggagtctg aatttgaatt tatcaccatc
      361 tgtgggaaga caggaaatga gaggagcatc actaatccgt ttcttcattt attaagcata
      421 agcataatct ttataaggag ataggcagaa gcagcagtga tcagggagac ggagagaata
      481 ttttaactca tattgacatc agagttccag accaagaaaa atgcagtctg tttgtcagtc
      541 aattccagca acaatttccc atgaccaaaa catgcagacg tgggatatta tttcattcca
      601 aggaggtctc tgaagactta ataat
//
LOCUS       KCPA01003906             925 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 430760tic ultra-conserved element locus
            uce-338, sequence.
ACCESSION   KCPA01003906
VERSION     KCPA01003906.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 925)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 925)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..925
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="430760tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>925
                     /note="ultra-conserved element locus uce-338"
BASE COUNT          287 a          146 c          176 g          316 t
ORIGIN      
        1 aaataataat attgaagcat gacttttctt ctagcagtta gttcattggg aatggtatct
       61 aatgaagagt tgtctaaagg cttgcttgtt tggaactaat taaagacaga tatcctaaat
      121 agaaaaagga tcatgggaat tacattaggt gtctggagac ttgttattct tttggtactc
      181 tgagtagatt gtggaagttg ttagggattc aagaaataag gaaagctaat aaaaagttct
      241 atttttctgg ttattggcca actattgtat ttttgtttgc aataagattt gtgccaacag
      301 gctaggggct tgaataaaac atttaaacat ttgtgcatta acacattatg gtgaaaagag
      361 agtcttgtgc tttcactcgg tgcatttcag ccttcaatta atgtgaaagc actacaatgc
      421 ctatgcaact tctcttgcct agtggtgcac catttatcat tgcagtttta cattgacctt
      481 gacacccact tcattagaat aaagattgtc taccatttag gttacattgt tcctctgcac
      541 agagacccca tgcaaatttc tgttcagata gaagagctgt gagcctgtca gaggtcatct
      601 gcattaaatg attgcagcta ttttccaact gcttcttttc attctactca attcaggcta
      661 ggaggatcaa tcaagccctc tgcctgaaac agtgggactg ctgggaatat aactgttttt
      721 ggtagtagtg gatatgccct aaacagtatt aaatatttaa tataaattca ttaaagggca
      781 cacaaagtct tcaaaaagat attatatata tgggatcact tttcttaaaa aggcagaaca
      841 atgaatacga actgcataat tttttaatgt aggcaaaatt cagttcatga agttgcttaa
      901 tatttctttg aatgtgttta tttct
//
LOCUS       KCPA01003907             527 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 430868tic ultra-conserved element locus
            uce-2594, sequence.
ACCESSION   KCPA01003907
VERSION     KCPA01003907.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 527)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 527)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="430868tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>527
                     /note="ultra-conserved element locus uce-2594"
BASE COUNT          138 a          148 c           85 g          156 t
ORIGIN      
        1 tttactctct cctctttcaa atacatgctc tccctcgctt aaaacacacc ccttgacaac
       61 tttcctacac acagggattt ccctcctgcc ccacctcagc cctcctgtga tcccagccca
      121 agctcttgca ggcagctgct atcccgatgt tctgctggct cacttccttg tccaagagaa
      181 gagtaattca ggaccatgag tttcttacca cttatttcca actctgccca gtgtgatttc
      241 tttccattgg ctgcttcctc tgaggacata attgtgtaca tcctccgtgg atcaggtgga
      301 tcgtactttt ccttgggcat tcctgtagaa accaaaacgt aagtaattaa ctgagatata
      361 gaattcttta gaaggtaatt cccatttatt tcaaattact tttgtaccaa atatcgctga
      421 atgggaaata ctagcataaa aagagattcc taatgctaaa atggcagaca acagcctagc
      481 ccaataatcc accagaatct gttgcatccc accaccttcc gtggcta
//
LOCUS       KCPA01003908             788 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 430978tic ultra-conserved element locus
            uce-1158, sequence.
ACCESSION   KCPA01003908
VERSION     KCPA01003908.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 788)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 788)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..788
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="430978tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>788
                     /note="ultra-conserved element locus uce-1158"
BASE COUNT          225 a          166 c          143 g          254 t
ORIGIN      
        1 tttattcagg aaacacagaa ttttaaatgc ccactctctc tacctgtagt ttaaaacaca
       61 atagcatcgt aattattttc tgaaccattc tgaaaagtac agcttttgta actttttgac
      121 atttcaggtt aaaacgttgc caccagcttg cactatgagc agcctgtaat aacagttaaa
      181 aaagctttct gaactatttg acaagatttc ttagtgctga ggccatatgc tgtagccttt
      241 aagctatttc ttcctatcag tttcattatc acctgcctct gagtctccaa tatcatcagt
      301 aagcacatgc agaatcataa ttatgccatg tacaagttct ttgataacat gtacagtttt
      361 cttcttaatt ctttatcaaa tgcattgatc gtggcatgtg tgcattgatc caggtccacc
      421 atctggctgt gtgtgataag cacagtggca tctttgcatt tccactgtca ttcattgcgc
      481 tacaatttgg ctgcagggga gtagtggctg ggattagccc tgttctgcta cttacttgca
      541 ttttaagttg acacctctac agcggctcag accacattac aaactgaaac acatacgcac
      601 gacttagtga tgtgacactc ctcaataagc ttactccact agctactcaa caatctgtaa
      661 ttggatttgt aggaataaca gcaaaagatt tcctaagaat tgctggggac agaaggtgaa
      721 gttttctcat tattggcaaa aggctaggta tagatcttag gcgattggta ttttcaaaaa
      781 cctgccag
//
LOCUS       KCPA01003909             714 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 431089tic ultra-conserved element locus
            uce-2277, sequence.
ACCESSION   KCPA01003909
VERSION     KCPA01003909.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 714)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 714)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..714
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="431089tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>714
                     /note="ultra-conserved element locus uce-2277"
BASE COUNT          209 a          107 c          142 g          256 t
ORIGIN      
        1 tgtgatgcaa tactttggta ttattataag tatatattct ttgtttaaga ttctatatct
       61 ctgccaaagg ctgaagaaag tctctgtgaa agctgtagaa gaaagtctga attgaaagaa
      121 atgggtcctg tcaattattg aggggtaaaa tctaacgcct gaacgcagtg gcgaaggaaa
      181 taaaaacaat tgcacagtag ctggaatttt aaactacttt gtctaagttc tccatctatc
      241 tacttagatt aattcaggtg ttgtgtatat ggtctaagtt gttattaaga gatggatttc
      301 ttactgtggc acgtattata ccttgcagat acttggttac tttgactatg ctttcacagc
      361 catctttact gttgaaatcc tgttaaaggt aatgcattgt taattgatcc ttgttagctc
      421 aaaagcagct ttagcaataa tgtttgtaac tttttgttta ccttccagat cctagggtat
      481 gcagattatg tcttcactag tatgtttaca tttgagatca ttttgaaggt aacaggtttt
      541 taaaggaagc ttgtttaaaa ggattttcct tgtgtgtcac ctgccaagaa aaggcacttg
      601 aagtgttctt cgccttttct ctaagcaatc aaagctaaac taaactagag gatatttgac
      661 aattcctcat agtttggatt ggttagggtg catgaagaag ctgatttttt atca
//
LOCUS       KCPA01003910             818 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 431202tic ultra-conserved element locus
            uce-5755, sequence.
ACCESSION   KCPA01003910
VERSION     KCPA01003910.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 818)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 818)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..818
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="431202tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>818
                     /note="ultra-conserved element locus uce-5755"
BASE COUNT          250 a          141 c          180 g          247 t
ORIGIN      
        1 ttttctaacc catagaaaag tgagaggttg agttggtcag gagataaact ataccactat
       61 tttagcagac aggaggatgc aaaacagact gccagggagc tcgagaggct ttatttcctg
      121 acgttcattt ttcatcaccc atcctgaaca gaccccaaaa ctcagactaa ttaaagacaa
      181 ataattaagc acattcagac tgtgaaggtt ggcagactcc cactgtattg tgagaccacc
      241 ttggcattta aatggttagg gactatatcc cacaacatca tgctcatctc attgtggtag
      301 agagctcttg agaatgttat tagctgggtg ttcgccttgc cgtttttcca catgaggcag
      361 atgggtaatt acgaagctaa tagtctgatt gagagaaatc agatgcagtg gtttgcccaa
      421 ttagatgata cattagcttc cttctttgta agcagctaat gtgtgaagca aagtggtatt
      481 tttgagggtc agaatcctta aacaagtgcc gagttgcaga ttattgtgtc tctctttttt
      541 tttctaatgg aggaaaagtg ctaagtcttc attactaaaa gcatagaaaa tgcaaatcag
      601 gctctgaaac aaaagagtga agggacaggc gagaatattt ggtgtccaat gtgtcaacct
      661 acaacatcaa ttacattgaa atgcaatgca tgggagccta atcaaggata gtgtaattgt
      721 aataattgca tgcttttgtt ggagagctgt ggccattgtt attgtcaacc atttgttttt
      781 ctctattgtt taaggggaga gtatttaaaa tacatata
//
LOCUS       KCPA01003911             464 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 431310tic ultra-conserved element locus
            uce-5254, sequence.
ACCESSION   KCPA01003911
VERSION     KCPA01003911.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 464)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 464)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="431310tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>464
                     /note="ultra-conserved element locus uce-5254"
BASE COUNT          107 a          101 c          110 g          146 t
ORIGIN      
        1 ctctggagct cttttctgga gccagcaacg gggatgcaac cagcaggctg tgacaaaggg
       61 tggccggtct ttccctgggt ctcccacctt cccggtcctg gagagggcag cagagaaaag
      121 cagagcgtcc ttggctgcga gcgcctggat ggagcaggag cagctgcgtt gcagtatcca
      181 aacacacttc tctgtgagga gggtaattta gagcaattac accgattatt attgcttttc
      241 taattagtgc ttttcctaca gaattagctg agtgtttatt aggagccgct tgttgccaat
      301 agcttaactg cttcactacc agtttttatc aaacattaga gtggcttccc tgtgtgtaac
      361 tggttttgtt atctggtttc acataaaagc cccaattaaa tattcatttt gctttgttac
      421 atatggcatt aaattttcat gagctgtatg ttctccttga attt
//
LOCUS       KCPA01003912             487 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 431418tic ultra-conserved element locus
            uce-5219, sequence.
ACCESSION   KCPA01003912
VERSION     KCPA01003912.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 487)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 487)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="431418tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>487
                     /note="ultra-conserved element locus uce-5219"
BASE COUNT          128 a          101 c           84 g          174 t
ORIGIN      
        1 ctccacacta gcccacctct cttctggaag acaaaggccg gactcagtac atttctcttt
       61 ccttctttca aaacagttga taaaattctg tatgaaactg tgatactata ttaagttttt
      121 agtgtttcta atttctataa aaatctatct ttgttacaga catggcaaat atgtatactc
      181 tgcttcgtgc tgtgtcaagt ggtttacctc atatgattca ggaactacaa aaccatatcc
      241 atgatgaggg ccttagagca accagcaatc tttctcagga aaatgtgagt ttcctcaggc
      301 agctgaattt gattaacgtg tttgcccttt tccttttagt ttatcctata gaattggtct
      361 caatgagcat ggctcatcta tcctgagagc tgatccagaa acaagtgcag ctagatattt
      421 ctcttgttgt ttgcttaata ctgtcttttg ttccatgtat gcactgaatt tctccagtgg
      481 tatttgc
//
LOCUS       KCPA01003913             611 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 431527tic ultra-conserved element locus
            uce-7807, sequence.
ACCESSION   KCPA01003913
VERSION     KCPA01003913.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 611)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 611)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..611
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="431527tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>611
                     /note="ultra-conserved element locus uce-7807"
BASE COUNT          204 a          126 c          133 g          148 t
ORIGIN      
        1 tggtggagtg tgttgaaata atgtaaagga aacccataaa ttcaaacttt atgttctgta
       61 aagaacaaat atgaaaaagg catcaaaata atgaaagatt gtttatgtat tctggcatga
      121 aatgggaatg tgttatgaga gagagcgcaa tggcagagac agatcgacag agctgacagt
      181 gtggtattca tcctgcatgg tacagcagac gtcctgctag tggcagtcga cagcgcaata
      241 aatcaagggc tctcgatgct gtacctacag cttattacat ccaagatgac aaataaataa
      301 taatccctgt cacagcggcc ctttgctcaa ggattgagcc tgaaaccttt tgctcatcac
      361 tcctggtctt aagtgaaaat actagaacaa gggaattgaa ggccacggtt tactgagctc
      421 atgctggcca caggaactaa aaccaagcag gaaaggtcaa gtagcaagaa aggataaata
      481 ttaaaataat cccagcaaaa agatggcaac atttcacagc tgtgaaactg caagcgaccc
      541 caagcccctc aagtcaagtt ccagattttc cagttacacg ctccctgtgt gttcgtttgc
      601 tccctccatt a
//
LOCUS       KCPA01003914             410 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 431633tic ultra-conserved element locus
            uce-7969, sequence.
ACCESSION   KCPA01003914
VERSION     KCPA01003914.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 410)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 410)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="431633tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>410
                     /note="ultra-conserved element locus uce-7969"
BASE COUNT          101 a          107 c          100 g          102 t
ORIGIN      
        1 agagctgcag ctgccacgcg atgtacggcg agattcaatg tgaaaagtgg aagataatgt
       61 gctcacacac taatgggcac tgaactagac acaggctcat ttttcacatc atgtcatctc
      121 taaggtttga ataaaaagca atggcgagaa tgagcctgga tctatctcag acattatcat
      181 ttgcctcccc ggttttattt gtgttgactt gtacagtctc aggagctgac agtgtgcggg
      241 cccccggatc agtgtgagtg ataatacaca gcacattaca ctgctggtga cagctcctgt
      301 tccccgcgct ggcatctgag cgccgcgcat ctccctccgt cagctcgaat gctgccagct
      361 gacagcagac agcagctcac cgaggggaca tcctgtctgt tatcatttca
//
LOCUS       KCPA01003915             457 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 431731tic ultra-conserved element locus
            uce-932, sequence.
ACCESSION   KCPA01003915
VERSION     KCPA01003915.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 457)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 457)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..457
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="431731tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>457
                     /note="ultra-conserved element locus uce-932"
BASE COUNT          138 a           80 c           90 g          149 t
ORIGIN      
        1 acaatttttc catgtcagag gtgcataata tcctggcggt cataaggaat gatgctatta
       61 atcctcttgg gcaatctcca ggtctgatta ttagggaaat aaatttgcat gctgcatatg
      121 agctaggtga atcaccgaga gcacaaatta tatttcctga cagcaagtta gagaatggag
      181 ccacatcgcc tctgaaagct atagaatttc aattcattac atgagattgg ttagaattca
      241 agtctctttt taagttgata ttaagttgag tctgttatct ctgtgaaggc tagtaggttc
      301 ccctgagtat ccacctaatc actacttaaa aaaatcgaaa cgtatagtta gtgtcatgat
      361 ttaggtacca gagccacttt atttatcagt gcagagtgag ataatttcaa tttgaggctc
      421 tgtagccctc atgaatttaa ccattttgaa agctttt
//
LOCUS       KCPA01003916             607 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 431841tic ultra-conserved element locus
            uce-4236, sequence.
ACCESSION   KCPA01003916
VERSION     KCPA01003916.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 607)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 607)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="431841tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>607
                     /note="ultra-conserved element locus uce-4236"
BASE COUNT          141 a          133 c          135 g          198 t
ORIGIN      
        1 tccttcagag gcactttttg gtagtgtttt gttttgatca tatgaacact caaatcctga
       61 agagattcaa atgaatgacc acagtacata cactttagca ctttctgggc atcttctttc
      121 ccttccattt caagcaaaga acgtttgcga ggtttggacc atcttttggg gttattgtta
      181 tctgtttcat ggttgtcatc tcgataatgc cctgtttcat tcatgtgcac tgttaattct
      241 accaaagtat cgtaggcagc actgcagtcc ttacagcgga atttactggc tccagtgaat
      301 atagagccat aaagcttact gctctgtctg tacagctgga ctgtgctaaa gaggctcggt
      361 tcaggcagaa ttctgctctg agaaacttgc tgcagtgttt tggccatcgc agtctggtgc
      421 cagtcaaagc tgccacttcc acaactgctg ctgctgctgc tgctactgct gctgctaccg
      481 ttgttttttt ccgaaattgg ctggtgaagg ttcaaattga gattggacca gtatgaattg
      541 gagaggaagt tattatacac ggccttcatt tgttctaaac tatcagacac cgtggagtct
      601 tccagtg
//
LOCUS       KCPA01003917             541 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 431949tic ultra-conserved element locus
            uce-869, sequence.
ACCESSION   KCPA01003917
VERSION     KCPA01003917.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 541)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 541)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..541
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="431949tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>541
                     /note="ultra-conserved element locus uce-869"
BASE COUNT          163 a          122 c          113 g          143 t
ORIGIN      
        1 ggcttcagat cgcgtgcttg agaataattc gactccgagc cctggaagag ccccctcttt
       61 ttttaagtgt ttggacaggg acgtgtctca gctctgatcg tagcagaaga acttctcgaa
      121 agcctccctc tcttcggcaa atatggtata atttacagag caacttaata atccgagggc
      181 caccgcaaaa gccctttgcg ttgtaaaccg cttctaatta cctgccagag caattagctg
      241 actatcacga agaaattaga tcgctcaatg tagcataaat aatgcgaata attttgtaag
      301 gagaatggaa agcgagacct ggtgtttctt tataaggaaa taacacctcg tactgtacga
      361 accctacatg aacacatatt aatgtctagg catgcacgga aatgaatccg aacatgaacc
      421 ctctggctta gattcagcac tttcttcatt tacatatgcg gggtgaaagt cggcttccag
      481 gcgtttagat acagagctct tccagatcac agtaattaac acatagcgac ttcaatagga
      541 a
//
LOCUS       KCPA01003918             298 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 432050tic ultra-conserved element locus
            uce-2839, sequence.
ACCESSION   KCPA01003918
VERSION     KCPA01003918.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 298)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 298)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="432050tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>298
                     /note="ultra-conserved element locus uce-2839"
BASE COUNT          108 a           52 c           53 g           85 t
ORIGIN      
        1 agagggagaa ggagagagag atatgacttt ccttgaatga tctgtttaac ctaaagaagt
       61 cattaattac ttatgtgagc tattgcttct gaaagacaat aaacctgcct ggtcgccatg
      121 gatatgacat atttgctctg aaaacaacac aataattagc aaaggggaaa gatacaagga
      181 gaatatgcaa actcctgagt ttaaagccat agtgtttccc ttacttgtca gagtcaattc
      241 tgtttgcaat tcaaatcaaa caaataaaca gaatactttt ttaaattatc tcccacac
//
LOCUS       KCPA01003919             650 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 432162tic ultra-conserved element locus
            uce-1652, sequence.
ACCESSION   KCPA01003919
VERSION     KCPA01003919.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 650)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 650)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..650
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="432162tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>650
                     /note="ultra-conserved element locus uce-1652"
BASE COUNT          218 a          105 c          119 g          208 t
ORIGIN      
        1 aactgcctaa gaaatttcat ttggagaaaa tatattaaaa tataaataat cgagttggag
       61 ccctactgta ttcaaaatac gaacttgttg cttttggaaa aattagcacc attttgtagg
      121 acagtagagt taaatgaagg agggtgattc tttcatttct gctctataga atgatgtgcg
      181 ctaatcagca ggcaatgccc tgtcagtgag ctaattcaac tccctgctaa aagaagtgta
      241 gattaatgga taaaggaggt ctgtggtagg gtcacactga tatggattca acgtgtacag
      301 cagcttgtca gatgcctgct tggattaaat ctaacctttc ttgttgaagg ttgccattta
      361 ccctattctt tagtgcctca atttattttc ctcccagaat ttccacataa aaaaattatc
      421 atctatttgc ttttcagagc aaatttagag aaccaatttc attatctgta agaaacctgg
      481 aggcattaca tacagaaaaa catagggaat atttaaggga catcatacct gatttattct
      541 aattctcaat gagaagcaga gctaatttta caaagaaaag gccagaattg ttatataaaa
      601 ttatttcaat ttaaggaaac tttaggttct acttctttta ggaaaaggca
//
LOCUS       KCPA01003920             444 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 432270tic ultra-conserved element locus
            uce-5752, sequence.
ACCESSION   KCPA01003920
VERSION     KCPA01003920.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 444)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 444)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="432270tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>444
                     /note="ultra-conserved element locus uce-5752"
BASE COUNT          143 a           85 c           69 g          147 t
ORIGIN      
        1 ttccctgctt ttgttagcat gagtcaccac cttaacatta tctcagctgt agacttttat
       61 ctgtgaatat ctaagccctg tcttgtggaa aactaattac tgagccactg agaggcttca
      121 taatgtcctg catttaagtc ctgaacatca tacataatgc ataggaagca gtcgctgcac
      181 tctgattaca gaacactgtc attaagagag caaattaaag atgtgaataa ttcactggct
      241 gagcttattg tcagtgctgc attgtgaaat tagaatttct aataagtact gcaatttttt
      301 taacccaatt aacacagaga acatcttgag tctgattagt acaataaaaa ttattacctt
      361 attcttttgc ttcacaacag ccaaattaaa tactgtactt aattatgcag cattcatcgc
      421 ttctgtgcta gaaataataa taat
//
LOCUS       KCPA01003921             528 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 432379tic ultra-conserved element locus
            uce-292, sequence.
ACCESSION   KCPA01003921
VERSION     KCPA01003921.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 528)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 528)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="432379tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>528
                     /note="ultra-conserved element locus uce-292"
BASE COUNT          188 a           73 c          126 g          141 t
ORIGIN      
        1 tcttgatagc accatttaca cattctttaa agtaaacaat atgcactttc ttagaaagcg
       61 atataaatat atataaatac aggacgtgct aacctctgtt aaccatctga atgtgatgga
      121 ataatctatt tctactgtgc aggtaggctt gtgcatggtg gtgtggcaat ataattttaa
      181 aagtttgtta cagatgtgat gggaagctgg aaggagtcga ataagcagaa aaaagagttt
      241 agatctactg taagcaatga gtcggaatga gccgttaaag gttagaattt atctttgttt
      301 ctgatcgttc aatgagaaaa atgacttcca cagaaataga taccttaaaa ggggaaaggg
      361 tggcaagggt gaaataggat tgaaagtcct acaggtaata gcaataactg gaagtgcaga
      421 cgaaattgtt cttcagacca aagaggaagg cagccgttta aaaagtctca atgctgtggt
      481 gctgaaagaa aagctcctgg tgaaaaagaa aaaaagggca atgcggct
//
LOCUS       KCPA01003922             775 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 432491tic ultra-conserved element locus
            uce-2878, sequence.
ACCESSION   KCPA01003922
VERSION     KCPA01003922.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 775)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 775)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..775
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="432491tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>775
                     /note="ultra-conserved element locus uce-2878"
BASE COUNT          247 a          124 c          171 g          233 t
ORIGIN      
        1 tatgacaaat ctgaagcacc tgaagaatat gcctcagagt atgcagagga aggacattat
       61 gaaggcaatg atcctgaact gacagaagac caaatagaat atggggaaga gcctggagaa
      121 gaagatgaag tgctagacct tgaaatcaat gaacccctag atgaatttcc agtgagtttc
      181 ttctattgta tcttcaaaga taacgttgca tcacgtgcat agggttttag actgatttaa
      241 aatctgttta cctccctagg gaggagggga aattagacct attatcactg tctgccagtt
      301 tctttatcta ggctgtgaca aagtttgtgt tgacagcttg tttggcggta ggtaatgctc
      361 ctttgtcatg ctgcaagcag ttgagaatca tgaccttgag gattgtatcc ttaaggaaga
      421 aaacagcttt gtgtggtgga gatacactgc caattgttag aagtacttaa tgcaaaagct
      481 tttatccagg ctttagacaa gatctgataa agtccttcga aggtgaaaag attattgacc
      541 tgctaaagac atctttaagg tgctaatatc ccaaagtgat tgatgtcctg cttgttcatc
      601 ctttttgtaa ctgagagctg tctaaacctg aataaagaga ttggaggtta gttcagaaaa
      661 tgtcacctgc ataattcaat ataatttaag cagcatatag agaacatgca ctgactttaa
      721 ttgctaatga aatgatttaa tcttaattaa aactgtatat gatcagtgag gtgtt
//
LOCUS       KCPA01003923             570 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 432599tic ultra-conserved element locus
            uce-5590, sequence.
ACCESSION   KCPA01003923
VERSION     KCPA01003923.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 570)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 570)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="432599tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>570
                     /note="ultra-conserved element locus uce-5590"
BASE COUNT          152 a          124 c          136 g          158 t
ORIGIN      
        1 aattccagct gttatatcag gaatattctt tttaatgtca gtgagtaaac agggttaaac
       61 aaaatgagga gatgcaggtt tgctttgact cttccaactc tgcctaatca tttctcaata
      121 ggctcagaac tgctccaagg catctggttt gatcatggat ggcatccctt ctacgtggaa
      181 tgcacctggt ttccatttct ggacgtgtga gtgtggtatc agaggggagg gcgggtggtg
      241 gagccttact gtacttctcc tccttgcacc tctgcaggat ctctaagctc ctctgatgaa
      301 ctgggtggtg gagaaagcta aaactatcca cacttttcaa aaccgcacat ggcactgcat
      361 catcatgccc ttgggaagca aaataaaaac tataagcaga aaggggaagg aacaagccca
      421 aaggagctcg agggtcacgc gtttgacctg tggtttcctc tgcactggga atgggagcag
      481 tgggctggac cacgtcccag tcaattatat tcctcattag ataatcactc caagattatt
      541 tgggcagata aatctttact tttatgaact
//
LOCUS       KCPA01003924             796 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 432712tic ultra-conserved element locus
            uce-2950, sequence.
ACCESSION   KCPA01003924
VERSION     KCPA01003924.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 796)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 796)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..796
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="432712tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>796
                     /note="ultra-conserved element locus uce-2950"
BASE COUNT          269 a          143 c          142 g          242 t
ORIGIN      
        1 attttcaagt agccaactac tcagctgcta aaatgtaagt cacatacaga atgtatgcat
       61 gcttgattct acactgtttt ttaaagggaa aatgctttat gtgtgtaaaa agagaaaagt
      121 gaaagaaaaa aatgaataag catgtgaata attagatcag agatagatgc caccttttct
      181 cagtgttgaa actgtgagga gaaaaaaagt gctaccatat aattgacata attgatctat
      241 ttttttccct tttttgctgc agtaattttt tatgcatgcc attgttgctg ttattatcca
      301 agatgtgatc ttgtgtggtt gataatactg actagatatg aatactggta agtaccagcc
      361 aatcacaaat ctatagtgtc tatttctgca tcaccaggtg ctatctcatg ggaaatatcc
      421 tcttttttgg caggcacaca gcgctctgca ttatctgtca ttttcattag attcaagcta
      481 cagctgagcc aaaaagactt agttctagca tatgtgctca aaatggccaa gatgtgattg
      541 tccaaattca ccctttcagg attgtattag aaaacaactg gagctaaagc taaaaattag
      601 agctagcaaa gtatctgaat tacatttggg aaactgcaaa caccataagc tcaaaagatt
      661 tccagcttat cacagtcatc acctccaaaa gctccaagga gcctaagtca gcaatttcta
      721 tgtttttcaa cacttctttt gtacagacta aatgtgatga tgtcaacaaa gaagagcaag
      781 gacatcacaa gaagac
//
LOCUS       KCPA01003925             874 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 432821tic ultra-conserved element locus
            uce-464, sequence.
ACCESSION   KCPA01003925
VERSION     KCPA01003925.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 874)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 874)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..874
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="432821tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>874
                     /note="ultra-conserved element locus uce-464"
BASE COUNT          270 a          178 c          164 g          262 t
ORIGIN      
        1 agcaccacat taaatgaaga atgcttgata tctaacccct gatttggaga gctcacttac
       61 acggtggggc catgtaatta agctgacaac ccacaatttc acacagaaca gaagtccaag
      121 actgaaagaa cttgaacagt gaattacttt taaagaaaga aatgggaatg caatcttgaa
      181 cactgttatt aaaaaaatga gagcaacgtt ttggagtaac gagcagagat tactcattcc
      241 cttgttttac acaagttgac ttttggcttt ctgcagaaca ccatttaaca gagcacatta
      301 ccaagctgct agccactttt cacagtgatg ctaaagcagg taagagacaa taagtggaac
      361 tgttgatggt ttatattact ctattatgtt aatgttcact aaagtatgcc ataagctctc
      421 tcattacatg tgtataaacc aattctctgt ggtgttattc ctgtgctaaa tgctataact
      481 acataaatct tgaattaatg gagactttat agttcctgaa aatgaagggt aattgctatc
      541 tgttaatgct gttgttgcta ttaaaggaag tatatatttt cagtaacaat gtttatggac
      601 cgtgagcttc acatctcagc tactgcacag agaagagaca gtgtaacaca agtatcagac
      661 tgactcccat tctccccctc ctccctctca ggatcatttc cacagcttca gcaaacaact
      721 ctgcaatcct cctaatgtcc ttcactgaac acacggtaaa ggaaacagga tttgcatttc
      781 catctccggg aatgcatggt ttgcgatgtt tctcgcttgg ttaaatggct ggacagctca
      841 ctttattagt ttgggtatct cgaacagttc tgtg
//
LOCUS       KCPA01003926             489 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 432932tic ultra-conserved element locus
            uce-7539, sequence.
ACCESSION   KCPA01003926
VERSION     KCPA01003926.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 489)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 489)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="432932tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>489
                     /note="ultra-conserved element locus uce-7539"
BASE COUNT          110 a          113 c          131 g          135 t
ORIGIN      
        1 agaaaacaag aaaggtggtg tcataagtgc tgctgggcat ggcacaaagc tggtaagggc
       61 accagagcca tctgagttgc ttgtaccagt cagctgccat ggctggctac caccttgggg
      121 atggcagtag atggggatgg gggatggatg gcgataggca aggattactg ggtggcactg
      181 gcagctgtct cctccctgct gccacatttc tcctctgtgc gaagaaaata ctcagtgacc
      241 tgatggggct gccaagggaa agttgaaggt ctcccattaa ttccagacta aaaatgacaa
      301 attcatcttc tacgacaatt aaatgaagtc agtaattgat gctaattgat cttcagccaa
      361 gagggctctt actgctttgc tgtgctctct ctgatgctct ggcgctttcc ccatttcccg
      421 gggatgtccc cagggcctcg ctcctgcatt ttgcatcttt tttggctgtt ggagtttgca
      481 tttattctc
//
LOCUS       KCPA01003927             675 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 433044tic ultra-conserved element locus
            uce-904, sequence.
ACCESSION   KCPA01003927
VERSION     KCPA01003927.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 675)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 675)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..675
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="433044tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>675
                     /note="ultra-conserved element locus uce-904"
BASE COUNT          224 a          106 c          148 g          197 t
ORIGIN      
        1 aggagtaaaa cattcactct tccagcactt actgcactga cagcttgata aagtggtaca
       61 aggcacaatg ttcaaacaga gggaaaaaaa aattaaaaat gtaataataa agttaaatgt
      121 aactgtttta aagtataatt ctttggagag ctcagtttta tgttgggccg gcatttgaag
      181 ctgcactagt cattattaac gggaagcaca gatagaggag atttaaatca ctaaagtaat
      241 aaaatctgaa cgagggctag caccttgaaa ggctcttgga gagaagattg catacaaatg
      301 caattaaaac gatgcttata aaatactaag atgttaattg ggtttagtcc cagaagcccc
      361 agcagtacag tatgtcagaa gttagctggt ttgaagttta aaaagagtgg tttaatttgt
      421 acaccttgtc ctaattacga agctttctgc agcctgtgta tcggcatggt ttattgtagc
      481 ttagagcttt gtaaaacaaa cacacaccag ttaattgggt tattgcaatg gaaaattggg
      541 ctgcaggact gaaaccttcc ttgctagtgt ttttttacag cttgtaatga acgctccagc
      601 aatgtcagga tagactgatt tgtaaggtgt gcagtttaca acttggttat accgctggtc
      661 cgaaaaatag gtgat
//
LOCUS       KCPA01003928             505 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 433155tic ultra-conserved element locus
            uce-7294, sequence.
ACCESSION   KCPA01003928
VERSION     KCPA01003928.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 505)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 505)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="433155tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>505
                     /note="ultra-conserved element locus uce-7294"
BASE COUNT          152 a           76 c          115 g          162 t
ORIGIN      
        1 attagttttc atagccactc caggtcttgg ggggaaaagc tgaaaagtac ttttgtttag
       61 aagtctgagt gatggtgggg gggaaacctt ttcttgaggt ttttgcatgc cagtgcacgg
      121 cctattgctg tgagagaagg ggtaaggctg cttgaggcaa tgcactggag gacaaagtgt
      181 tttctagcac tagaaaaaga aaatgcatgg caaagttttg tcttctagta gactatatag
      241 catgcagagt ttagtatgtg tcaaaacagt gtatgacatt gctgtatcaa agttgtaaaa
      301 ttaagcatta tttattgaaa actatgtatt ttttttgtaa aaacctgatc acctagagga
      361 ttaatatcag tgacttgtgc tagtgctaca aacttaacca gcttctttac tacagtactt
      421 gatatgcagt gttaatgctc agggttgaaa ccagtccact ccaatgtctt tttttgcaag
      481 agtttttaaa taaaggaaca acata
//
LOCUS       KCPA01003929             457 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 433259tic ultra-conserved element locus
            uce-2680, sequence.
ACCESSION   KCPA01003929
VERSION     KCPA01003929.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 457)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 457)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..457
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="433259tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>457
                     /note="ultra-conserved element locus uce-2680"
BASE COUNT          116 a           81 c          105 g          155 t
ORIGIN      
        1 ttttttcttt tcaaaagtta aggactatac tctcagaagt ctgttcggtc agctgataca
       61 ttgtttgaat gtatgtatgc gtcttgcctg ctccctactt gaatttgttt attgggggaa
      121 ggaggtggtg ttgattacat tggttttagg gtttcttttg gttctattta acaatagcag
      181 tgaaagtttt ggtgacagcg attatgacta ctaaacaatt cagtttattg gaagacgcat
      241 tctactggat catatcggac ttttcctagt ccctgagacc ctaacttgtg aggtttttta
      301 gcaacaatca caagtcaggc tcttgggacc taggcggagg ggaaccagca gctctggact
      361 gtgattgttt ctctgcagaa tttagagacc caaaggagct ttccttgtct ggaaggggaa
      421 aatataccta tttcaagcat cagaactgtt cctaaaa
//
LOCUS       KCPA01003930             882 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 433372tic ultra-conserved element locus
            uce-496, sequence.
ACCESSION   KCPA01003930
VERSION     KCPA01003930.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 882)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 882)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..882
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="433372tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>882
                     /note="ultra-conserved element locus uce-496"
BASE COUNT          267 a          176 c          165 g          274 t
ORIGIN      
        1 ccctgttaca tctgcagcac ttcgtttggt ttatattcaa atcgatgatc ggcacataaa
       61 gcttttatct cctacctcct ttgtaaataa cggcacagag aggccacaac tcgtgcacac
      121 atgcagagtt cacaccccat ttctccagca gtaaccaggg ctctggtttt ccataaagcc
      181 gagtgttttt aaaaggaata tagccggatg ataaaagaac actaaagatt ttacttttaa
      241 taagaacagt gtgtccttaa aacggcatat ttagctagca gaatgttaac tgcaaggtaa
      301 gagtgttgtt ttataccctc agtaaccaga ccaattatct gcgaagtttt ttcatattta
      361 atgtatcccc agtctccttt caccatctgc ccttccccct ctaacattgt ggaattttta
      421 tgagatagga caaaaatggg catttccctt attaccatct cactgtggaa atcaaatatg
      481 caaggaaagt agtgtatata ctaattagtg ctgaattcat aattactgtg ctcattgatg
      541 gagatacatt tgaatacatt caactcctct gggagtggag caggctgtcc agaatagttt
      601 gaaaaaatgc cctcagcctc ttttcttctt gaaattaggg atctgtggca tacagtaatg
      661 ttataagaag aagatccaaa gtgcccgcaa tttctttaaa tataattaat caagtgaagc
      721 atgtaaccta atgaatgtat ttgatacaag ctactgttca aatatgggct ttatctctgt
      781 ctgtgttgga attactaaaa ggagaggaca gaggatcagg cattcctgtt taaaatgtta
      841 ctcaatggtt ctcgctgcat gtcaacagta cgcgagcttg tc
//
LOCUS       KCPA01003931             631 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 433483tic ultra-conserved element locus
            uce-4067, sequence.
ACCESSION   KCPA01003931
VERSION     KCPA01003931.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 631)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 631)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="433483tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>631
                     /note="ultra-conserved element locus uce-4067"
BASE COUNT          219 a          114 c          110 g          188 t
ORIGIN      
        1 gaatccaatt agcatatcat tgtgactgat taaatatgcc tcatgtaaat ttacatgtca
       61 aaatacatac tgtacttaaa caaacagaca aggatgccag tcttctgtaa acagctttgc
      121 attcataagc taaacataaa aacttatatt taaattttca atgactacct gaatagagtg
      181 aaaggaagat agaaaggtac tgttactcat gcatgaagtg agagaatgaa tatagacatt
      241 tgtttctctt tgtctcagaa gaaaactatt gacaagagat tccccatctg catatcaggc
      301 tgtcacgtca gattagctca tcaggtaatg gaaatttggc ctctgatcca gaaaaggtcc
      361 ctatgcacta agaatcaaga ctgtttcaaa gagattgtat tatcttagac agcaggatta
      421 aattaatatg ggaatgactt ctactggagg aaattttttg ttaaacatgt gctaatgttt
      481 attatgcaga gctaccactt ctcataagtg atctttcttg acatttattc attacttgtt
      541 gaccttcctt gcaactgaaa aacaaacaag taagtggacc ccctccgaag catggagcca
      601 agacctctaa agagcattaa tgctagcaca g
//
LOCUS       KCPA01003932             733 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 433594tic ultra-conserved element locus
            uce-5005, sequence.
ACCESSION   KCPA01003932
VERSION     KCPA01003932.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 733)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 733)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..733
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="433594tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>733
                     /note="ultra-conserved element locus uce-5005"
BASE COUNT          245 a          128 c          132 g          228 t
ORIGIN      
        1 aatcctcagt gataattaat ataaattcac ttttgcctta aagatgttag tggtctctaa
       61 aaattcctgc tgtcttgaaa tacccttttg tttgccaatt gtctgatctg cataaagagg
      121 aataaagtgt atgttatagc ccaagacatg tcttcactct gttggttttg taaataaagc
      181 tgatgattgc tattccatgg caaccataga aaggaaaaca ggaaatataa tgcagaaagc
      241 ctgcttcagt gaaaaatact gtaaattgaa tttgacagca tttgatggca tttgattatt
      301 ctagtcacag ccaaacaatg atataaagag taatatgaaa cagaatgtgt tactgcctag
      361 cagactcaaa agcaataaac cttcctccaa tgtgacacaa tcacttcaca atcataattg
      421 tagcctgttt gatacctctg agtacagcag aagggcactg actgacatag atacattttg
      481 ttttttattt aaagtgaaat gaaaatggcg cactggggct ccagatacaa tcggtatatt
      541 cacctacata ggcatgaatc acttggcagt tatttcagct gaagtttaaa tgtgcttaga
      601 caacaacaat atcaaatctt tctcagatag ctgcaaaaaa atcagaaatg ggatgtaagc
      661 acatagttct ttttcatttt gtagccacac atggccttac attgttatag ctgcagtatt
      721 tctatgggag gtt
//
LOCUS       KCPA01003933             582 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 433705tic ultra-conserved element locus
            uce-3167, sequence.
ACCESSION   KCPA01003933
VERSION     KCPA01003933.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 582)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 582)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="433705tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>582
                     /note="ultra-conserved element locus uce-3167"
BASE COUNT          166 a          132 c          115 g          169 t
ORIGIN      
        1 agatctatga caacatctaa tgcattttgt gagaccagat gtcaacagct tgtctaggcg
       61 atgtgtaact ttttgtacag cagaacagga aaacaaaggc tcatacattc agctcggaat
      121 tgaaattcca catggagctg atcttttgag cattatttgc tttcattaac aaaatgtatc
      181 ttaaacactc cttttaattc aacaaaacat agctctctct ccctcgctcc ttttgttggt
      241 gatcttactg caaaaatgtc tgtgttgctt tttctccccc gccccattcc ctgcctgtaa
      301 aatcgaagct ggacaaacac tgcacggctg aagtgacata tttgaatgga attcagacca
      361 accagttcct gtttatgttt ctgatttgag aatgtagcct tctcattcac tatacattag
      421 aaacacacca aggccataaa tggtgtcagg ttgcaggcag gcagggccaa gcagcattaa
      481 tcattacttt aaggcaactg gcaaaagcag cagctgaggg aacactacac ccttcagctc
      541 tgcataaatg gacattccag ggtttagcgt gtgtgggttg gc
//
LOCUS       KCPA01003934             607 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 433816tic ultra-conserved element locus
            uce-4559, sequence.
ACCESSION   KCPA01003934
VERSION     KCPA01003934.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 607)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 607)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="433816tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>607
                     /note="ultra-conserved element locus uce-4559"
BASE COUNT          168 a          140 c          116 g          183 t
ORIGIN      
        1 tcttaatttt ctaattcata ttcatcaatt aaaaataaac cgtccctttt gatgagtgaa
       61 tttacagaaa ccagttgcta aagcatccta acactgtagg agttcagcct ggaagatttg
      121 catgcagcat cctcagacga aggcaggcgc tttcgatttc catcgagagc cttgctgcgc
      181 tggaactcta atgggcttag aacagtaaat tttgaagaaa ctgattgctg cccccgtagc
      241 tagtaaatgc ctgcctggac ccagtggcat ttgaaaaaag tgttttatca taaaattatc
      301 ccagcagagt ccattctgca agataacatc atcatcatca tcatcatcag tactccatgc
      361 aggacccaac agctctggca caatattgcc agtcatttat ctgttgtcag cacaggttac
      421 acactgtaat ccttgactgc ctcggaatta gaatgtcttt gatgtcccca caagagtttt
      481 ttgcccgaag gctttaccaa tgctcggcgg ctcagtgttt attcctcgta atcttcctct
      541 catctccagg ctagcagtga cagatggtta tgggcacaca atagtattaa gagtttgata
      601 ttttttt
//
LOCUS       KCPA01003935             439 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 433925tic ultra-conserved element locus
            uce-4537, sequence.
ACCESSION   KCPA01003935
VERSION     KCPA01003935.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 439)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 439)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="433925tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>439
                     /note="ultra-conserved element locus uce-4537"
BASE COUNT          127 a           86 c           83 g          143 t
ORIGIN      
        1 agacacattt cctggaggga aatggacacc tacctacaca caaagctatc cagctaattt
       61 ataccttgtt gaatttataa tcttgtctat gcttctatgg acactttgta tgggctgcag
      121 ctcaaatcct aaaatagtca agaatttttt cctttcccat atagtattct atttactttg
      181 actttgaaaa caaaagcgta taaatgcaat aatgcaggta gactagaaat actagattga
      241 aaatttaaag tagtttagct tgtcccattg tgactgacag tgttgtacga cacccaacgc
      301 tgtaccctga cattttacag gctttctctg tagctgaatc tagtattagc tttggaaacc
      361 cattgtgtga gtggtgggtg gatgggtcgg aatcgtgtgc tctctacaca ctgtatgtta
      421 ctcacatcac aagctgtat
//
LOCUS       KCPA01003936             582 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 434034tic ultra-conserved element locus
            uce-3441, sequence.
ACCESSION   KCPA01003936
VERSION     KCPA01003936.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 582)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 582)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="434034tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>582
                     /note="ultra-conserved element locus uce-3441"
BASE COUNT          181 a          131 c          116 g          154 t
ORIGIN      
        1 tctatctacc tccattgttt agagctcaag tggagagtaa acagggtaat gccattgtga
       61 actgcagcct ctctagaact tgttaaaaat tgcagacaaa cttccgtttt atgaactttt
      121 ccccctcttg aaatacccca atcagtactt ttggtacaca tacctcgaag aattctctcc
      181 tcatggcaac gtagaaagtc ccagattcta acagtgccgt cgtcagagca tgtagcaaat
      241 ttattatccg tgggtgagaa actgttacat gaagacacac agcaggggaa agaagtcagc
      301 atttaacaga ttatctatgc ttctcagaca gggcaaaatt atactgtaat gtgttataca
      361 ctgaaggagg catttgaaca taggcacttc taagtgaata cagtgcctgc caaacaagac
      421 atgaacttag caaaggatta ctgcagtccc ctgtcagcac cttcctatct gtgactgcac
      481 acagtggtgc cttctctgca ggatgagaag caacatcaat acggtctgat agtcacccta
      541 gatcatgttt ggtaatacca caagaaagtg acactgcata ga
//
LOCUS       KCPA01003937             651 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 434143tic ultra-conserved element locus
            uce-3905, sequence.
ACCESSION   KCPA01003937
VERSION     KCPA01003937.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 651)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 651)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="434143tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>651
                     /note="ultra-conserved element locus uce-3905"
BASE COUNT          214 a          107 c          122 g          208 t
ORIGIN      
        1 ttaggaacaa tttagtatca tttcatttaa aatatgcaag ctttatatcg agagtaaatg
       61 tgtagccaca aggtaaaatt tatattagtc tcatcattaa aagcctttaa agtttccatt
      121 atccattatg tcaggtagca aatatcttct caatgtaact ccagacatta aatctgtcaa
      181 gaggcatgca gtaaaataaa tgtctgggat accttcataa acaaaaatct tatttccata
      241 attcatacag ctggctggca tttattggca cgtcaggtgc aatggggaca tttcaggaac
      301 attaacatgt acagcatcat ttgtcaacaa agcaacaatg taagcaaatc gttcagaact
      361 catacagatt tacagctttc tctgccagct gctaattacg gtgtgctctg cctatttggt
      421 atggtctttt ttattggaaa atgacaaaag ggttatggta tcccagtttg gaatatagat
      481 gcgcttttag taataatatg agtggtaata tgactacaca gcctggagtt ttgatctagt
      541 tgcactagtc tgataattga ccggttctga ttgatgaagg acaaagagaa atttgcaggg
      601 gtagaagtaa cctctgcaga caaagaaata attatccttg ctttaatatt g
//
LOCUS       KCPA01003938             759 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 434254tic ultra-conserved element locus
            uce-4355, sequence.
ACCESSION   KCPA01003938
VERSION     KCPA01003938.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 759)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 759)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..759
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="434254tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>759
                     /note="ultra-conserved element locus uce-4355"
BASE COUNT          222 a          123 c          151 g          263 t
ORIGIN      
        1 tcagagtact aatattttga tgcatgtgtt tcaccttatt ttgattaaat cttttccagt
       61 tttgcaaaca ctataccgca acatgaaaaa taagatttta tctgtaaaca caaagccctt
      121 catctaatat ttgttgctgt tgccaatttt tcaatgaaat gacctaagac ccataacata
      181 tacagtagtt gcattatggg gaggggggtg ctatctgttc ttgctttata atgggggtag
      241 ctttagaagt gggttggtgc tctaaggagc acaagtttgg gatattttta aatgaactga
      301 agagaaatta ttagctaata gactggcagc acgctgtaaa attattactg tattgtgtac
      361 tggctataag atgtagaatc tttcagtaag ccaatcatct gtaatcatcc tagcagtgta
      421 atattaggtt gttaaggctg ctgtgtttta aagggcattt ttatttggtt tttggtgaaa
      481 tactttaatt tgttgattat attcatatgg aaacagcatt cattgataat agctctaatt
      541 acatatgtat gaaaacaaca aacactggat gatctagttg attatttaag cataaaataa
      601 attgtgttaa aacccttgga taatgtgcat ttggcagtgt tcttgtaccc tacagatgtg
      661 aggttatctg cccctggctt tcagctgctt ttgtctgatc cacctcttca tcttcccagt
      721 gtctccaggt cagggcagca ggaggaaaac acagcagcc
//
LOCUS       KCPA01003939             438 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 434361tic ultra-conserved element locus
            uce-2392, sequence.
ACCESSION   KCPA01003939
VERSION     KCPA01003939.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 438)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 438)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="434361tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>438
                     /note="ultra-conserved element locus uce-2392"
BASE COUNT          138 a           72 c           88 g          140 t
ORIGIN      
        1 aggagaggaa atgatgattt ttcctcctcg tgtattctta ctattgacca aggttattcc
       61 ctttatcatg tgcagatttt attgagtgat gccaagtgag atgaatagaa gcaaataatg
      121 acagtgctgc agtgatgaaa tgagagacag aggtcgtcta ggttttatac tgaacaaatt
      181 gagtcacatc cacttctcat ccattattta ggggtgattg ggcaggcttg gcttctatag
      241 atttgataat cattcagatg tccatattaa atatgtaaca taaatttctc atttggctgt
      301 cgatgacttg tcaccgcaaa acaacaatgc ataaaaaggg ctttaatgta tggatcctca
      361 gaaatatttg acataaataa atatgtaaaa ggcagataat aaaatctgtt tctgtctgcc
      421 tgccagctag ccttcatg
//
LOCUS       KCPA01003940             568 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 434470tic ultra-conserved element locus
            uce-7884, sequence.
ACCESSION   KCPA01003940
VERSION     KCPA01003940.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 568)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 568)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="434470tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>568
                     /note="ultra-conserved element locus uce-7884"
BASE COUNT          185 a           86 c          118 g          179 t
ORIGIN      
        1 gggggcttcg tgctggagaa agggttaact gggatcctct ataatttgtt cccatttcct
       61 ttccctccct tcagctcctt cacaaaatgt taatctaatt gtgatagtat cactttgatg
      121 acaatatgac aagacagaca aatttgattt tattctccac agagcaaagc atatgctgct
      181 tgggagactt tgacagagag aaggacataa aacaaatgga gttcatgaat atacaatttt
      241 tattgtacac agtagtgaca tccaaacttc agagaatagg tgggtgagac ttatgcttta
      301 ctattgagat taatgggtac gtaaaaaagt gccaacagag agtactacag tttatgttaa
      361 aaatgtcgac gtggataaga ataattttct tctcaagatg aatgatgcat ttaatggctg
      421 tgagacattc atggccagta gcagttcctc aaaagtaatt ttttgttgtt attgtaaatt
      481 acataatctt aactgcaatt atagccctgt ttaggtaaag gtcaagttag tacagtggat
      541 ggttataaac taagagggaa attggtaa
//
LOCUS       KCPA01003941             447 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 434574tic ultra-conserved element locus
            uce-4967, sequence.
ACCESSION   KCPA01003941
VERSION     KCPA01003941.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 447)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 447)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="434574tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>447
                     /note="ultra-conserved element locus uce-4967"
BASE COUNT          134 a          105 c           89 g          119 t
ORIGIN      
        1 tctactactg ctattctagc taaacatgta tacgggttta tagtaacagt acaggtattt
       61 caggggcaaa aagatcttat gcttggattg cagggtagaa aacattattc tctaaatcac
      121 atccctttca ctgttacaca tttgaagtca taccttcctc ctactgcgtc gtcttgtggc
      181 tgggccccgg cagtgttcct ctgtgaacgt cgcagtgacc cccctggatt gttattaggc
      241 cggttggaca ttggcacctc tctcctgaag ggacataccc tttctagaca ctatcattca
      301 ctgaaagaca agagaggaaa agaaatgtag catgaagact cgttgccacg cccaaatgta
      361 aaagcaaaac tttcaaacaa aaaagacaca cagacaaggt tcttctcaag aacatttagg
      421 accttaacac agagcaacca ggttttg
//
LOCUS       KCPA01003942             484 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 434681tic ultra-conserved element locus
            uce-5910, sequence.
ACCESSION   KCPA01003942
VERSION     KCPA01003942.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 484)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 484)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..484
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="434681tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>484
                     /note="ultra-conserved element locus uce-5910"
BASE COUNT          158 a           88 c           74 g          164 t
ORIGIN      
        1 attatagcag aaatcatctg ttatattctt gcataaagca aaaataggtt tgtaagccct
       61 tgcccttaat ctttctttca attttcttcc atttaaaaaa catctttccc caatactcta
      121 attaatgcaa atgatattca tgattagtta gtattatgct aatctgagcc ccaaatttcc
      181 ctaaatctac atggtgttgt ctgagtacca gattgctttg ggttcctaag taaaattaca
      241 ttagcctgcc agctgtacaa aacaccatga tagagtagaa atccaagcaa atcatcaaga
      301 ttacattagt tttgtttctt aatgaacaac tgtttgcatt agggattaca gacaaattat
      361 gattttcctc tctgtaccca ggcagccagg catctgttga gaagtttcac taaatagatt
      421 gaggagagct aagacagaga gatgagtcta atatttcatg taattgaatt ttttccatta
      481 caaa
//
LOCUS       KCPA01003943             609 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 434766tic ultra-conserved element locus
            uce-5882, sequence.
ACCESSION   KCPA01003943
VERSION     KCPA01003943.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 609)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 609)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="434766tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>609
                     /note="ultra-conserved element locus uce-5882"
BASE COUNT          151 a          125 c          146 g          187 t
ORIGIN      
        1 gggccagcac cctgtgggca cgggatcttc ccgcgggacc agatgggagt gggacacggg
       61 tgaggccttg ccctgtgccc ccttgcctct cccaggtcag ccctgctcct tgctggcaat
      121 attgctgtgc tggcgaggat actactgtac agttcaggca ctgcaggttt ctaatctgct
      181 tatttataat tcaaaagctt gcccatatat taatgaaccc ttaatgagct gttgaaaatg
      241 cctgaattac agtcagatta ttaaactcca acagcccctg taatcatacc atttgagtgg
      301 gctttaggta cttttcatat ctgcagcttt gtattgtgaa ggagatgggt ttattcgaag
      361 aaagctttgt aataattttg acctgcaatt tatttattgg cctctgaatg cagtagtcta
      421 tgcagatgct ctcgtctatt atgtgtgggg gcaggtgcac agcatgttga aagacagcta
      481 attacgattt gctgaaagat atgctaaaac tgtggtctta gaacaaagcc aagttcattg
      541 ttaaacaatg ttttagtgtc tgtttatgtg gtttgtctga atcacagaga tcctgaaatg
      601 cacggtgca
//
LOCUS       KCPA01003944             660 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 434869tic ultra-conserved element locus
            uce-4828, sequence.
ACCESSION   KCPA01003944
VERSION     KCPA01003944.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 660)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 660)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="434869tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>660
                     /note="ultra-conserved element locus uce-4828"
BASE COUNT          224 a          167 c          112 g          157 t
ORIGIN      
        1 aaacacctgt attcttgatc taattccctg caataaactc cttcagcaga tcagtttcac
       61 tcaaagaggt ttggacaact caaatatttt gtgcaaaaat ggagcagaaa gtatcttatt
      121 ctaccgaaac ttacccatta atgaggaagc ttagagctgt acagtaattc ccaaccaact
      181 gcagaaagtt gagagtttga aaacactaaa gcacttttga ctatcaagcc tttctgtgct
      241 tcaacactgg ctgcagtgta aggaaggact gaaggtatgt ggtctaaaca caacaaaagc
      301 cactgcctta ctctagatta aatatgcagg aagaggcccc tttgcataaa cacaaacact
      361 cagcaaatga gtaactggct caaatcagac gcctgctgtg cattctacct gtcctgatct
      421 ctgacaagct acacaaaggg gataggagcc gcaaaatcaa atcaaatcat agctaaacgc
      481 tctgctcctc agtaaataac aacagcacca acaactccac gccaaacgct cattcctaat
      541 ctaagcattg ctctggcaca gagctgaatc gtgtgctgtg cccactttgg ctcagccacc
      601 catctcacca cagcagaaga aacacaacca aacaccacct gtaaaattaa ttttcattaa
//
LOCUS       KCPA01003945             632 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 434976tic ultra-conserved element locus
            uce-4676, sequence.
ACCESSION   KCPA01003945
VERSION     KCPA01003945.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 632)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 632)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..632
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="434976tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>632
                     /note="ultra-conserved element locus uce-4676"
BASE COUNT          165 a          132 c          125 g          210 t
ORIGIN      
        1 aaaaggcttt tccactgtga cacaaggtct tttcttctat tgcctgccac aagtgtaatg
       61 acttgtgatt ttctgttcct tttgcttcca gaatgagccc tgatggagct ccctaatgat
      121 aacaaaccat cactgcagta atattgatac ctgttgtaat cactggcatt ctggcttttc
      181 aattttcact atttgccttg gatcaagtag ctctgtgcta atgcaacaga aggtcaccag
      241 atgaaggggc tgataacaga gagggactgt tctacttaac atgcatggag gattatgctt
      301 ttcagtcgtc ctcgagctaa tctttcaagt tgtccttttt tgactttctc agtttaatca
      361 gtttaatctc atcttccttc ttttctgatt acaaggattt tctgtagaaa ccttgcctcc
      421 acaataagga ccacgtggca atttattctt atattgattt caacatttct tttccactac
      481 cagggctctg ggggaagggt gagaactaga ggggaagtag aagtgcctcc tgcctagcaa
      541 atccccacac ttttgttatc tgggagtctg aataatacac ttaagtcaga aatggcagca
      601 gattgaaaat gctcagctgt tattagaagt ta
//
LOCUS       KCPA01003946             644 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 435086tic ultra-conserved element locus
            uce-7309, sequence.
ACCESSION   KCPA01003946
VERSION     KCPA01003946.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 644)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 644)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..644
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="435086tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>644
                     /note="ultra-conserved element locus uce-7309"
BASE COUNT          203 a          132 c          119 g          190 t
ORIGIN      
        1 tcaacaaaac cttgcttctc tgtatgttcc agtgtactac aggcaggcat tatccagtcc
       61 ctttctaaat gctggcagga gagtttgctt tcccaactct gaaattctaa aatataatga
      121 aaatgcagct accgtacttt ctaagctctt ggtagatatt ttcacttact ttgtcatttt
      181 caagggggga aacaatggtg gcatctgtgc cctggtgcta agtgctcatt tgcatgcaga
      241 ggcagagaga tatccgttta ttatcaattt tatgcattac ttcatttcat ggtgttaaaa
      301 caattacatt caaagggttc agcagtccac agccaagcta ttcagggctc cagcagcatc
      361 atataataac gttattcagg gagagacaca tacatcatag tttactgact tagaagtaaa
      421 acagagaagc aactgctata gagctggata cagaatttgt aaaacatcag agatataaca
      481 attagcgaga aactcagggc agatggacat gagatttatt aacttctgaa ctactttcca
      541 agaaggttga gaaaattttt tagatgcaac agttctacca aattctctgc cacattctca
      601 atgttttcta tagcaccacc cacactgcaa agctacactt gagc
//
LOCUS       KCPA01003947             489 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 435193tic ultra-conserved element locus
            uce-3443, sequence.
ACCESSION   KCPA01003947
VERSION     KCPA01003947.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 489)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 489)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="435193tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>489
                     /note="ultra-conserved element locus uce-3443"
BASE COUNT          155 a           86 c           81 g          167 t
ORIGIN      
        1 ttaccatttt catatctagg acactaaaat gagaggtctt aagtacaaaa taaaactatc
       61 tttagaaatt agtaaaggta tagactagct aggagctcca tttgtttttc ttttgcactg
      121 tttaaaaaaa aaaagaaggt ctgtttcaaa tcctatttgt cgcttatctc tgtttgttca
      181 gttgttttta atatcacgta ctgaaagaat ttcaatagct gtttcaccat gaagtcattt
      241 gttatccttc agcaggcctt tgcctgctga attgtaaagc agcctcgact atttgcatcc
      301 tccagatgga gcagcatata aacactccca gatatttctg gtaagtatga aaaaatatct
      361 tatttgtcct ttctgtgaat aaataggaga atgtcaaatt ttatagacta ataaatttgt
      421 atgtcggcgc tgacattgaa tctcttatgg cctgcaatgt cacagaccct gagaaacaca
      481 gtttcaaaa
//
LOCUS       KCPA01003948             561 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 435296tic ultra-conserved element locus
            uce-3906, sequence.
ACCESSION   KCPA01003948
VERSION     KCPA01003948.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 561)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 561)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="435296tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>561
                     /note="ultra-conserved element locus uce-3906"
BASE COUNT          188 a          112 c           98 g          163 t
ORIGIN      
        1 aataacctaa gttcaagtaa tgaaaactaa acactgcaag aaagacatgt acagctcctg
       61 aagacaaaat gtagggtttg cataggttgc taactaaaaa cccctattca gttaacaatg
      121 ccagtatctt tgtgcttcta ctgtttgaca caatgatgga ttatttattt actgaacagc
      181 actggtggcc agaaaatctg attttcatgc atgaaatcca tgaaacctca gccactgaac
      241 agcttctttt acacgtggca aaggtcacct atcaagggat tttctcacgt tttgtgtgat
      301 tggtcatgcc tcatttcctt caagaaaata tgatttcccc aaagtgtgtg cattttaaga
      361 gactctcaaa gactgagaaa gttatttcct ctttgtttgt gataagcaca aaatacagag
      421 tctaacctac agggaatggc aagcaactgt ttgtagctgg aaaccatatt taatcctatc
      481 attaaggaaa agctcagagc atactaggaa caaagagtgc aaaactaaac acttaacctt
      541 gtcacttaac ctttcagact t
//
LOCUS       KCPA01003949             768 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 435407tic ultra-conserved element locus
            uce-2004, sequence.
ACCESSION   KCPA01003949
VERSION     KCPA01003949.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 768)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 768)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..768
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="435407tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>768
                     /note="ultra-conserved element locus uce-2004"
BASE COUNT          191 a          164 c          130 g          283 t
ORIGIN      
        1 agagatcact tttcacacct actcaacgtc aacacctgtt tagctgtagg tttttgaaaa
       61 agcaatgact tactctaaca tgtagaagta ctttatttct acgtacataa tttattttaa
      121 ttttatttca tattatttaa cataagctat atatctgtaa tgcactgtgg gtaaagagaa
      181 tctctgatga acagttctag agaggtagat aatttccttt acttaataat agttttcttt
      241 ccttgcggct gcagactttc ataactagca ccatgccaaa cgttcgaaga ttggattatg
      301 gcctgtcgta ctagattatt tttgtcagca tgctgaccca gggtgccctt ttcttgtgtt
      361 gttccttctg tttccatttt tcatgtcatc cagcttttca tcttgtcaat cagcttttga
      421 cttcctcatt aaagtgtctg tcacacaagc agcctggtct ccagtcagtt gtttaatttg
      481 ttcctcatgg catccaattg agttatttat ctggcccagc tgttcccaag tgcttccagc
      541 atcacttttt catgtgtttg ggtttaacct ctatatctat gtacagcagt gtgaattgtt
      601 ccattcattc tcttgactgt ggattgcttt gcctctgtct aatgccttga cattgctagg
      661 aaggctgcta ctgtattctg cggcttaacc aaaagcacta tttcaccctg gtgttatggt
      721 aacaagaaca actaaacaca ctcaagtatt atagcaggcc caatcttt
//
LOCUS       KCPA01003950             434 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 435509tic ultra-conserved element locus
            uce-1035, sequence.
ACCESSION   KCPA01003950
VERSION     KCPA01003950.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 434)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 434)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="435509tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>434
                     /note="ultra-conserved element locus uce-1035"
BASE COUNT          141 a           78 c           88 g          127 t
ORIGIN      
        1 atatgtatgg tagcctgagg ctgccagaaa ctttgactgc tggatgaatt atagaacagg
       61 aagcagatgg gctgtgtata tgaaacaacc actatctggc atgatatgct gcgcaatttg
      121 gctgcaaaga ttaaattgag ctattgaatg tttaatacac tatgcataac aaatacagcc
      181 agagccacaa aacagcataa attacagaat tggtattcac gctgcctttc ccaggaatca
      241 atacactgcc acagctcata agagtctgtt gtttaataca cataaagaag agaagaattc
      301 ttctattaaa atgagttatc tgggctattt accaaaggca gtgatttaac agtggtaaag
      361 tctatgtagt gctgttgaat gcagatgata atacttcttg tccttgtcgg cctatttcat
      421 agctcctatc agtt
//
LOCUS       KCPA01003951             668 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 435615tic ultra-conserved element locus
            uce-1752, sequence.
ACCESSION   KCPA01003951
VERSION     KCPA01003951.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 668)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 668)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="435615tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>668
                     /note="ultra-conserved element locus uce-1752"
BASE COUNT          218 a          123 c          128 g          199 t
ORIGIN      
        1 ggggagaatc aacattgctg ttcttgagat gaacctatca gcataggctg gccaaacaaa
       61 actgtaatgc aagaaccaaa taaaattatg cactgtgatg tggcaccaat tagaaagatt
      121 ttttcacgta gagtgaaaat gagaacatac tatggcttga agttgcaaaa ctcctgacta
      181 ccattttgac tgatcaagag actaatagat taaaacctca gcaggccttg ttcacgttat
      241 gcagaaaaaa aaaagtgctg cagtttagat acctctggaa cttttccaca gtgtcacagg
      301 tttgtaatac ttgaagccct acatttctaa gaatatattt cttgctcagt tgtttcaggc
      361 aagcccaaga ctttgtaact tttaaggggc ccaagatttt ttttcaataa cagaccagct
      421 tcttattcct gcagttacag atgtaatttc ctttgtcaaa cataaggtac caaatataat
      481 gcaataaaac gttttgaaaa acaactgtgt gaatatttaa accaatctat gttgtattcc
      541 aacagtgaat tggaatgcag ctcattactg tgctgtccag tcacgctgac aatgtcactg
      601 ctgtgggtgg tcattgagta taaagtgcaa atgcattcta tgtaaatagt gaatgtctgg
      661 gaagtccc
//
LOCUS       KCPA01003952             788 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 435727tic ultra-conserved element locus
            uce-2755, sequence.
ACCESSION   KCPA01003952
VERSION     KCPA01003952.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 788)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 788)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..788
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="435727tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>788
                     /note="ultra-conserved element locus uce-2755"
BASE COUNT          262 a          161 c          140 g          225 t
ORIGIN      
        1 cagacattta tatggcgata aatactacct tcaaaaatgc taaaaatgtt ggctaggttt
       61 agtctgagct actaaaaaat tattataaat tgtagcatca gacacaagac agacatgaat
      121 tattggctgg cacagactag aagcaacatt tatctttcac ttcagtctaa atcacactag
      181 ccgcaacacc ttccatttca ctcacacaaa caatacatta ttcaaaataa aatggagcat
      241 tcttgggtaa aaaactactt catttcaaag ggggaaaatg aacaatacac agaaacaaag
      301 aacgacagaa accaaagtta agtaggaaag tggtctatta ttctgtgtta ctgcacaaac
      361 agtgcttgct taattgtgcc tagttagaag ggttggtgca aactgcacac atggaagatg
      421 gcaataaaga cctcagtcag ctttgtggaa tgaagtaact aggtaactgt tttgacatat
      481 gatggtctca gctccacctc atctgttaac agagtgcaaa gatcccaatg tgagccctga
      541 tgtcatcttg tcctcttact cctactaaaa atcagcaaat tcttttgcac atttttctgt
      601 tagagaagca cggatatctt cttcttcata gtcatcaaag ttgctggtat ctccaggacc
      661 tctgcacttt ggtatgaatg gagcttctac ctgtaggcac atgaaatgtt accggccaaa
      721 tagacttaac attgtgcaca gcaatactcc tgttatttcc cagatcctgc caagatatta
      781 caggttta
//
LOCUS       KCPA01003953             646 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 435837tic ultra-conserved element locus
            uce-5450, sequence.
ACCESSION   KCPA01003953
VERSION     KCPA01003953.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 646)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 646)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..646
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="435837tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>646
                     /note="ultra-conserved element locus uce-5450"
BASE COUNT          216 a          109 c          134 g          187 t
ORIGIN      
        1 ttgtaaatac attagagcag ggttacccgc gtttctgtgt gtgtgctttg tatctggtta
       61 tccaagctga tgatacgggc attcccgttc agttgcatat attaaagctt ttaaaaaata
      121 tagtaaaaca aaaaatatga cctttaaaag catggttgag ttgcattcat tttataacca
      181 tcaaagcaac tctttactgt tgtaaggtag aaaaatcaat gatgcaatct ttttcctttt
      241 gcctcgtgca atccgtaatt gaaatggaaa atcaaatgaa cggctaacag ataattgttt
      301 tatcaatatt ccctgcctgc cctacaaggg tcagcctaga atgatcatga gccacggata
      361 tgatgaggac aaaatgtgaa attgaacagc aaggaggcaa taaatcaacc ttgacaagaa
      421 agagtgacca gcatgtagct cttgtaggca gcttttggga cactttttgt ctcaggtgtc
      481 tgcactgatt taaaaatgtg agaatataat atttgaagct ctaccagtgg gtaaacaact
      541 ttctaggtta aggcatcatc aaagcaaaca tgctgcaaaa aatgagtata ttggggcata
      601 gtgggaaaat tctcacagta aaacaacagg ggaaatattc tggggc
//
LOCUS       KCPA01003954             450 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 435946tic ultra-conserved element locus
            uce-5995, sequence.
ACCESSION   KCPA01003954
VERSION     KCPA01003954.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 450)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 450)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="435946tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>450
                     /note="ultra-conserved element locus uce-5995"
BASE COUNT          116 a          121 c          123 g           90 t
ORIGIN      
        1 gagcttcccg gtcaaaaacc tcacgcaaag gaggcccctg tcggcacgaa gctacagcac
       61 agagagctac ggcacggccc aaacgcggcc ggtctcagcg aggcccacca tggcagctct
      121 gctggaaaag attccgtcag actataacct gggtaactat gtcgacaagc cttccgatag
      181 cagtgatata aagccgaggc ctccccctgg gaagggaaat gagagctgtg ctaaaatgcc
      241 cgctgactgg agacaacagc tacttagaca tatagaagct agaaggttag acagggtatg
      301 tttggcattt ctctgcaatt aatgccttta gttgtgtgtt tcggtgacca ccagaattcc
      361 cagggattcc tgccgtgtca gagggacctg agggatccca aaatccagaa gctcctcact
      421 gatgatgccc cgtcaccggg gtggtggctc
//
LOCUS       KCPA01003955             509 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 436056tic ultra-conserved element locus
            uce-2345, sequence.
ACCESSION   KCPA01003955
VERSION     KCPA01003955.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 509)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 509)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="436056tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>509
                     /note="ultra-conserved element locus uce-2345"
BASE COUNT          150 a          110 c          110 g          139 t
ORIGIN      
        1 tgaagttttt aactcgcatt aatttcagaa tagaaagacc ataactaaaa taatgcccgg
       61 ggcacactgt gatgcctacg actggatttt aattgacttg aagactgtca tagtcctatt
      121 atcataaaac ctgtaatgca cttccagcat ggaggaccca tctgtgccca ccatccatct
      181 gtttagacat gattggcaaa gtggtaggga actcgcagtg gttgtctctg cctgaaagga
      241 atgaaccaca ggatcttcca gtgagtgcca aaaacttctg agaaggtctg ctgccatggc
      301 tttcggggcc tcgatctaca gcattattag tgaaagacag catgcccaca gtgcacttta
      361 gtacaacaat gtaggttggc tggggatcca atactggact ctaatgaatt tatttgtgcc
      421 tcactttcat ttcattatga catgcagctg agacttaact ttggagaaca gaaactcatc
      481 aaacaaaggc accttttgaa gcacaggtg
//
LOCUS       KCPA01003956             408 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 436158tic ultra-conserved element locus
            uce-3294, sequence.
ACCESSION   KCPA01003956
VERSION     KCPA01003956.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 408)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 408)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="436158tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>408
                     /note="ultra-conserved element locus uce-3294"
BASE COUNT          114 a           71 c           73 g          150 t
ORIGIN      
        1 ctgcctggaa tgttttgcag attggcgttt ctgtttgttg attccatatt aaacagaata
       61 accaagcgtg ctgaaggtaa agccctggtt taattaaccc tcttggtgta gtaccatgtg
      121 attaaatgtg actgagctgc tccttggggc ttctgctact gaaaatacta acaataatca
      181 tttgttttct ttttatattt aaacacatta ttgcatagct tggtgcagag ataattacca
      241 attttatctc ctgtgttttt ctaatgttca ttaataacaa taaagggttg taggttaaaa
      301 actcatttaa ttgcctttat gttaatgaca ttatgaatag ccttagctac aagattttaa
      361 ttctgtccag tatcctgttt ctcagtaaag ccccaggaga gctgctca
//
LOCUS       KCPA01003957             443 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 436263tic ultra-conserved element locus
            uce-850, sequence.
ACCESSION   KCPA01003957
VERSION     KCPA01003957.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 443)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 443)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="436263tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>443
                     /note="ultra-conserved element locus uce-850"
BASE COUNT          139 a           67 c           95 g          142 t
ORIGIN      
        1 aacttggaca ttatgtgttt gaatggatgt aaaatatctg tctttctagg ctgcaattct
       61 aaggatgcca tggaaaggaa aaaaaattac tagctctagt aacagatgtg aaattacatt
      121 agataaatat aatcattagt ttcagtctca ccctggttaa tttgtttgtg gaaatgtgca
      181 acccattatt cattaggtaa tttttcacac attgattaga aagccatgtc gaattgtgac
      241 cccgcacatt ggggtttgcc tatcttgcag tgaactatat cgcttacagt agtggaaatg
      301 ggggacaaaa tgtttatctc aggctgattt tgtgccaata agtaaagtaa atcaatagcc
      361 agtgaagtgt gaacaacatt tctctgctgt ataatatggt tttgggggca atttgacatg
      421 ctacaagggg aaacaagggt ctt
//
LOCUS       KCPA01003958             608 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 436373tic ultra-conserved element locus
            uce-2209, sequence.
ACCESSION   KCPA01003958
VERSION     KCPA01003958.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 608)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 608)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="436373tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>608
                     /note="ultra-conserved element locus uce-2209"
BASE COUNT          202 a          102 c          110 g          194 t
ORIGIN      
        1 tcctgggctt tgcagggcca tttctttatt aatttaatac ctctgcgctc agctgtggtg
       61 cggaattcag gattgattcc tacactgatt tccacaatat gatttacata ggagctgagt
      121 gtaaatttaa aataatttgg actgaatgat ccttactgga atggatggcc tcaagaaaag
      181 gacggaaaat aaaagcagct ttagtcagaa tctaagcaat ttgctgccaa atacaagcag
      241 catttcccca gattataatt tacactgtat taactgtcaa gagtactttt gagaaatata
      301 gataacaatt cagatgcaat cgatagggag tgacagttga ttttaaagct taatgcaaga
      361 caagaaagaa atgactgggg tatcagctct ggaagaataa atttgttttg tatttgattt
      421 ttgtgttaaa tttattactg ccaagaacag ctctctttca ataatattaa gaacaagatt
      481 gtgaaattgc aacatgtttg tctcccacag ttttcacagc atatccaata taaaatgatg
      541 ccccttctaa atagatcaaa ttaaactgct atatatattc cttttgctcc actggttaag
      601 caaagtgc
//
LOCUS       KCPA01003959             719 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 436486tic ultra-conserved element locus
            uce-1290, sequence.
ACCESSION   KCPA01003959
VERSION     KCPA01003959.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 719)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 719)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..719
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="436486tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>719
                     /note="ultra-conserved element locus uce-1290"
BASE COUNT          220 a          152 c          128 g          219 t
ORIGIN      
        1 ttaaaacaag aattctctta tcaaaggtat caggattgcc taagtgtgaa atgtttccaa
       61 ttaaaatttc attcatgttt agccaatttt tcaattgaat taaaaaagca taaaatacat
      121 ataatctaat gtatcctctc tgaagagtga agtctttatt ctgctgaatt cagaagagcc
      181 tcatccaata taatcactgc attcattcca attataagag caaagttgtg cagacttctt
      241 atatgttatg caatgtcaag aagcacagtg cacagcacta attcctcaag tgaaagaggc
      301 agcgatttcc cacagcagct ccttgattta aattacagag cacatttatt atgcttctgt
      361 tcctctgact gtgaaatacc atagtacagt agctttgttc tgacctcttc tccaaagccc
      421 tgcctcaaag tgtgactaat ctagtgccgg atgacagcta acttcaacat cagacaacac
      481 gaaaattgaa gacacttttt atcctcttgc caatctgcga gtgtctgaat aagcctcgtc
      541 aacttcatta caaactcatc atctcttgtg tagataatga tagcctaggc tggtggagaa
      601 ctcagcttct tgttgttttt actgactctc tctgcctcca ggccaagcat ctgtggggat
      661 aatgaatgga gcaattcttt tggcacaaaa caaaaggctc ttggggtggg gaaaggccc
//
LOCUS       KCPA01003960             507 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 436590tic ultra-conserved element locus
            uce-3801, sequence.
ACCESSION   KCPA01003960
VERSION     KCPA01003960.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 507)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 507)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="436590tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>507
                     /note="ultra-conserved element locus uce-3801"
BASE COUNT          160 a           78 c           79 g          190 t
ORIGIN      
        1 aaatttcatg acctttaaat gcagtttatg aatattatct caacaattta aatgtacttt
       61 ttattttaag attaatcttc tttgattttg ccaatttgag cagaggagtt cactggaaaa
      121 tgttttcatc caattttatt taatttggat atagattagt tacacccctg cattctcata
      181 aatgtttact ttgtctattt cagtgatcgc tgtggagaag acccaaacca gaaagtaatc
      241 catggggtta ttaactcctt tgttcatgtt gaacagtata agaaaaaatt ccccctaaag
      301 gacacatttc tgattatgta tttttaattt ggaatgtcaa tctagcatat acattatttg
      361 ttcttttctc tcctctagtt ttatcaggaa atttttgagt gtccttttct gaatgaaaca
      421 ggggagtatt acaaacaaga agcttcaaac ttattgcaag agtcaaattg ctcacagtac
      481 atggagaagg taagagattc tttaata
//
LOCUS       KCPA01003961             552 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 436700tic ultra-conserved element locus
            uce-2001, sequence.
ACCESSION   KCPA01003961
VERSION     KCPA01003961.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 552)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 552)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="436700tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>552
                     /note="ultra-conserved element locus uce-2001"
BASE COUNT          165 a          130 c          102 g          155 t
ORIGIN      
        1 ttctatctct cccccagggc cttacaggtc accatgtata tcttagtggg actgttcagc
       61 accgtgtcca ttccatctac ctccaacttc acctgaaggg caaaatcctt aagatcttga
      121 cacaatactg ataaatacat ggaattatta aagttgccat ctcagcagaa taggattgct
      181 gccgcctttg ttctcagggg aatacatatt tcacccagta gcaagacacc caactgctgc
      241 aacaatcaaa actctctgaa atgcctttaa gctaatcatc tttgaacata agcctttgtt
      301 gttaaatcag ggaccttcta gatgcaaggc agagaaacct tttttctcca ccttgcacaa
      361 aacagcttta agcctgtcac tgctgacagt aaggttcagt gatctgtcaa cattcacccc
      421 tgataaagac agtgagagaa atccatggct ctggagagtt cagcagagac caaacagtgt
      481 gtttgcaaaa gagcattttt atatgttttc ttgtgacagc actagtttaa cagaaaatag
      541 ttggagtgta cc
//
LOCUS       KCPA01003962             674 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 436811tic ultra-conserved element locus
            uce-3932, sequence.
ACCESSION   KCPA01003962
VERSION     KCPA01003962.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 674)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 674)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="436811tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>674
                     /note="ultra-conserved element locus uce-3932"
BASE COUNT          217 a          127 c          131 g          199 t
ORIGIN      
        1 cttgactgca aagtttgggg aataggaaaa ctgttcgctc tgctggattt taatacatgt
       61 ttacatcctt ctttgcagaa cagcaccacc tctcaattaa tgtttctctt agccttaaaa
      121 aagcaatagg taataaataa atgtttttac aaaggctgct aagcaatttt agagacttct
      181 aatatttaaa gctttttcat tgatctcctg ttaaatgaga agcaagaatt aacctcaatg
      241 acagtgctag tagctctgca gtctattttg gcctgttctt taagtaaaaa gagcaaccta
      301 gatgagaatt ttgtgcttca ctggatattg aaagatgagg caataaactg ctaaacttga
      361 gtaatcacac actcccagag gaatgcctca aatggggttg gtcaaaaacc ttgaaattct
      421 agccttctgc acactgcctg ggctttaaca tttgatgaga gtcattatag tgggggactg
      481 aatacaagtg tcttctgatt acagaccttc cattaaaagt tcccaccagt gtgcctttcc
      541 atagagaagc gtcaatggga ttaaaatctc aattcacccc agtcaattct ccagtaacac
      601 gatttcatta gaggcaggca gggaggaaaa tggactagaa agcactgaaa cagctggtgt
      661 ataaattata aagt
//
LOCUS       KCPA01003963             331 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 436915tic ultra-conserved element locus
            uce-2917, sequence.
ACCESSION   KCPA01003963
VERSION     KCPA01003963.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 331)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 331)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="436915tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>331
                     /note="ultra-conserved element locus uce-2917"
BASE COUNT           91 a           56 c           65 g          119 t
ORIGIN      
        1 tgaatatgct tataataaat aaaaaaagga aagtgtgtaa gggtgtttca ctaacatatt
       61 tggctgttat ctctattttt attatagaca gctgtatgaa aactataggt gttcatgatc
      121 gtgttttcga tgttaacgac aaagtagaaa attcattaga accagcaggt tagtatgctt
      181 agagaatctc ttttaacaaa tgcgtgtatc cctctggtgc ttcctcttcg ctctgcatgc
      241 tttgcatggt acaactgccc tgcttttgca catttctagc agtgctaata cagcttatgg
      301 tgtatttcct gtatccttgt ttaatgcagg g
//
LOCUS       KCPA01003964             407 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 437017tic ultra-conserved element locus
            uce-1943, sequence.
ACCESSION   KCPA01003964
VERSION     KCPA01003964.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 407)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 407)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="437017tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>407
                     /note="ultra-conserved element locus uce-1943"
BASE COUNT          171 a           72 c           49 g          115 t
ORIGIN      
        1 aagtgaggga gagaaacagc atgttaaatg aagtatactc tctaaaaacc accgatgagt
       61 gcaaagaatc cacttagaac atataaccaa atgttattta atatcttaaa aagtaacaca
      121 atccaaaatg gatatttcac acaacactac ataaacaaca tgaacacaat attaccatat
      181 ggagggactt tcaaatatag acttacaaaa atccctgtcc ttttttttcc tttaaattat
      241 tatactaagc atgacaagta atcatcattt acaatatggt acactgacac aataaaaacc
      301 atgttacaaa tgtgctgtta taaatcagta acattaggga agacatttca tgaactgcaa
      361 ttatttcata tgaaatacta tacaatataa acagaacatc catcttg
//
LOCUS       KCPA01003965             722 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 437130tic ultra-conserved element locus
            uce-1037, sequence.
ACCESSION   KCPA01003965
VERSION     KCPA01003965.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 722)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 722)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..722
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="437130tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>722
                     /note="ultra-conserved element locus uce-1037"
BASE COUNT          235 a          137 c          103 g          247 t
ORIGIN      
        1 aagcaacaag gcagctgttg aacaagtact atcaacaaag caatcttcta gccctttgat
       61 ttaggctatt catatcttct gccctgaaat aaaatgactt tcacaattaa aacaccaaaa
      121 tcaatgctgt atctattgtc atgtctgcag gagaaaagct ttaattacaa ctctagttag
      181 ataacacaat cattacacct ccttaatctc aaatataaaa ccagtaccct ttcagtgcta
      241 tgccaccctt tctttgaatg tgaatggctt tttatctgag cactttaatt tgcatgcctt
      301 tgctgcgagg cagctccccg tgatatgtta attgcagagt gctttaagta ctaaaagatt
      361 aacataaaac cctttgcaaa caagctaata gtttatgata atttttgcat ggcctttgtc
      421 tgtctatcac tggattgcct ctagctgtaa ttttataaag aagctgtaaa atatcattta
      481 aacaagttca tttacacata attattacca gaatcacatt attcaattta gatactccag
      541 cctattaaca atccatgaac taaaatgtaa ttaaactatt ttccttttat gaacctattc
      601 attacaatgt gtgagagatg gatctctcag tttcactgaa aatttttgtt gttggaattg
      661 acaagtctgg cactcattct gtgcttttaa ttatattaaa agtatttcaa ggcaggtaag
      721 at
//
LOCUS       KCPA01003966             499 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 437234tic ultra-conserved element locus
            uce-3904, sequence.
ACCESSION   KCPA01003966
VERSION     KCPA01003966.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 499)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 499)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..499
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="437234tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>499
                     /note="ultra-conserved element locus uce-3904"
BASE COUNT          137 a           86 c          103 g          173 t
ORIGIN      
        1 gaaagtggta gctccaaaca atatagcaat ctaccttata tagagccttc agatactgtg
       61 agtggggatc ttgcctgtga gagggtgagt gaagtgtgct tgtgaccgtg cgtgtttgag
      121 aacctatata ccagcatgta ctgagaacgt atgtgtgtag taataattat gctgcaatgt
      181 ataatcttgt gtgttattta aacagtacta gtactgtaca ctggttcctt tccttgtgtt
      241 tgcagttgca cactgaatgc aacgggtgca gcaattacag acatttagta ttttgtcccc
      301 aacgtacttc aggtgtaagg acctttctac tactattatg cttccccttc agtgtgtacc
      361 actaaagaat gcattgattg ttcatacaga gtaaccttgg gggtaatggc tgatttacaa
      421 gttattttat caatgtagag acacaatatc catttagcaa tattaaattg ctaatattct
      481 gttttccttt taaattttt
//
LOCUS       KCPA01003967             441 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 437337tic ultra-conserved element locus
            uce-1903, sequence.
ACCESSION   KCPA01003967
VERSION     KCPA01003967.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 441)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 441)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="437337tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>441
                     /note="ultra-conserved element locus uce-1903"
BASE COUNT          141 a           75 c           74 g          151 t
ORIGIN      
        1 ctgtttatgt gcagaaaaat agaacctaaa ggccacagaa tgaaatataa tttgttaaaa
       61 acagggaata gcattgatta aaatgccagc actttactgt gcagaagtat gtccccaggt
      121 tccttgcact tgccctgtga ttatacaata gattttaagt ctgtgatatc tacaaatcta
      181 catcaaaata tattctatag ctgtaggaaa cagctctgaa ttgttaacct tctctccagg
      241 tactggaggt aacacactgt gagattagat gtatattttc ttcaagatat accacccatt
      301 gaggagtcca tatttacatc ttttgttgat atttttatag attaaaagag tctcttttct
      361 ggtgataatt ctgctaagta ctgtaatttg ctgccactaa tatttgtctg agtcctagtt
      421 tgcaaaatat atttgaaacc a
//
LOCUS       KCPA01003968             651 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 437448tic ultra-conserved element locus
            uce-6273, sequence.
ACCESSION   KCPA01003968
VERSION     KCPA01003968.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 651)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 651)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="437448tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>651
                     /note="ultra-conserved element locus uce-6273"
BASE COUNT          184 a          130 c          120 g          217 t
ORIGIN      
        1 tttactaatg ctttcttaaa aacttcatca cccatcagcc actcgttttg attgaataat
       61 gtctcccaat ttttagtctt tcatctatta aagaaaaggt cttacctggc ctgttttgta
      121 ttgttctctc tgctctcttt ttttaatcta aagtaatttc aaagagtgag cgtcagatat
      181 caaacccaat atcctttttc tcattagcac ttttcccgtg cagaccttca aatgtggtaa
      241 taattaatga gtctgtgtca gaaaatgaat aaaagatggc tcagatgctt cactgttcag
      301 ggctgacctt tagctgagtc tactgtatta atatattctt gtgttgtcag actcaaagag
      361 ctaactgcct tatgaattat ttatcaacac aaaaagtctt aaccagaaac agtgttaaca
      421 ttaatttcta accctctgtg tcacagcaaa gcctgcctgc actgcataat tgaattttag
      481 ttttagacaa gcaatcaaag cacaagtcgc tgttgttgta agtgtggttg cctatgatag
      541 caagaggaac ggctgctctt tttgcacatc tggtgcatta caggcagctc aggtttctgt
      601 gagcaataag cccgactgca gacaaacgtg gaatgggttt gcagggttga g
//
LOCUS       KCPA01003969             750 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 437562tic ultra-conserved element locus
            uce-4678, sequence.
ACCESSION   KCPA01003969
VERSION     KCPA01003969.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 750)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 750)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..750
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="437562tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>750
                     /note="ultra-conserved element locus uce-4678"
BASE COUNT          217 a          144 c          168 g          221 t
ORIGIN      
        1 tgcatcagga aacttgtagc taaataagac aatcctctaa ttctggtgtg tgtttgttta
       61 gtgaaacact tcttaagttc agctcactga tgaaaaatta aaaatcgtct ttcacatctt
      121 ttggagagca atcagagtgt cttatctgtc gagtttcata tagtagctga ctgctttact
      181 gtgccttacg gagctttgat tgcaatatgc tgtcaagagc caacagtccg tgctacttat
      241 ttggctttat gccaagtctg gctccctgat tcctcaagaa gttgctatca gcccagaggg
      301 ggcaaaacca atgagccata gggcatgctt tttattaaag aggagtcaaa gagcgaaaag
      361 aaaccacatc agctgctgtc aatactgagc gagtgccaga aacccgaagg ctaccactgc
      421 tgcagaacaa ctgccaagcg ctataaatct gagctttgct gtgacgcaaa gtttccttaa
      481 gagcttaatt tctgaagcta ctgtattact tttctcaaag tgctgtattt ttaggtaaaa
      541 tccacttgag ggagtgaggg ttaagatata agtgtgattt tgatgaatga aggaactacg
      601 ctgtgtgtgg gttcttggca agtagccatg tcttttggga tcacagaaat tattgatgac
      661 acagaacact cgtatgccct tagcctctac agctgattca acacagaacg aaatgctgtc
      721 tagagaggaa aagttttcta gtggagattt
//
LOCUS       KCPA01003970             675 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 437666tic ultra-conserved element locus
            uce-4343, sequence.
ACCESSION   KCPA01003970
VERSION     KCPA01003970.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 675)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 675)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..675
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="437666tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>675
                     /note="ultra-conserved element locus uce-4343"
BASE COUNT          225 a          118 c          108 g          224 t
ORIGIN      
        1 gcaattgcaa acactaacat ggacattttt taacatcaga aaattctgga ggcttccaaa
       61 taaactcata attcagaagc atttgagaga cagccatgca tcaattatag ttttttagta
      121 ggttatatcc ttggaagaaa gtagatggta aaaataaagt tgttggtgac ctaatacatt
      181 gcaagtggtt tgtcacctac aagactacat tctttaaaga tatctaacac acaatctcaa
      241 gtgaatttat tgaccaaaac cagttccaca gaaccaatta gtatcttaca caggctgccc
      301 tgcaaggctt atgaggccat ccatcacttg tccatttaac tatttagcat ttgttccagc
      361 aatttgtcac actgtcagaa gggtagcatt tcagaatagg agttttggtt gaaagaaatc
      421 taactcagat agtgcagata tttcttttct aataagactt acacaagatt tatgtttcta
      481 ttagttttaa ccttaagcat cttgtctgga aggtgaggtt aattctttaa agtttccaca
      541 tttaaatcaa ttgtgttaga tgagaattta aaaatattat gcaaaatata attcaaactt
      601 catcaacaat tcacagttct ggagtgcgtt atcttacagc tgcagtgctt acattattat
      661 cacttttgcc atcta
//
LOCUS       KCPA01003971             600 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 437773tic ultra-conserved element locus
            uce-4285, sequence.
ACCESSION   KCPA01003971
VERSION     KCPA01003971.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 600)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 600)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..600
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="437773tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>600
                     /note="ultra-conserved element locus uce-4285"
BASE COUNT          188 a           84 c          118 g          210 t
ORIGIN      
        1 ggagtgctgg atgtcaatta cacgaaatat ctaaaagtta attaatgctc tgtggtaatg
       61 ctgatggttt tatttgtatt gcaggtagtt ctttgagtac tttataatta acagacatta
      121 gtaaatcatt tctcttggct gaactcatgt actatgagtt cacaagggac ttttaaaact
      181 ttaggcagac aggattttta gattgcagtt ttaaaaactg aagacaagat cagaaggtaa
      241 atctatacag ttcttattag gttatgttta cagaggaaga tgtgaaattc tacctcgcag
      301 aactggccct tgctttggat caccttcaca gcttgggaat tgtgtacagg gacctgaagc
      361 cagaaaagta aagtaaaatg tattttacca ctattatgtg tattttgctt gttgctttgc
      421 cttttccact gagactttgt aaacaaatac ggtttaaatg aaatagtatt tgctaaagta
      481 ataacagaaa tattttaaat gtaaacattg ctctttatgt gttttggtga atgtgaattt
      541 taattttcag cattttgctt gatgaagcag gacatatcaa gttaacaggt aggcaccact
//
LOCUS       KCPA01003972             686 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 437882tic ultra-conserved element locus
            uce-7229, sequence.
ACCESSION   KCPA01003972
VERSION     KCPA01003972.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 686)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 686)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..686
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="437882tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>686
                     /note="ultra-conserved element locus uce-7229"
BASE COUNT          209 a          132 c          118 g          227 t
ORIGIN      
        1 tttgtgcata acttaattca ttcttcaaga caagtacaaa atttgtcact gacatttagc
       61 gccagccgta ggcaatggat aaaatgaact agttagcaat ttaacctgta aaaaaaacag
      121 agtgggatga acaattttct gccatcaaag caaatggcta acatttagca agattttatt
      181 tttatttttc agcccatccc atcctcaaag aagtcaggct aacatttttt ctgggtccta
      241 aatcttcctc tcagcctatt tctttaatgg tttaaagtaa atgactatcc agaggataat
      301 taggcgctgt gctgtcgcat cgtgtcaggt cacagctgga tttagtcagc attaaccttt
      361 ggggagaatt ggaatatcag tatcatttaa aattaaagac gtgtaagcag gcatttctgg
      421 agatgttaga aaagtaattg tctgtaaatt gtttgacctt gagatttaat tgcatgcaca
      481 acacacattc tagcaagaac cctggactgt tttcattctc tttcacctcc gtacctctca
      541 ctttgcagaa cccattaagc tacctgtgga tttttccgta aaatattaaa gattgtttta
      601 taccgagaac aaaagctttt aaccgggacc tcttactgtt aaacagctgt agtatagacc
      661 tcacttattt gaatttcagt cttttt
//
LOCUS       KCPA01003973             417 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 437989tic ultra-conserved element locus
            uce-5832, sequence.
ACCESSION   KCPA01003973
VERSION     KCPA01003973.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 417)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 417)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="437989tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>417
                     /note="ultra-conserved element locus uce-5832"
BASE COUNT          137 a           81 c           61 g          138 t
ORIGIN      
        1 attaggaaaa gtcactttaa taaaaaggaa attgcacata atgtaacaaa acaattgcta
       61 tttggaaggc cctgaagaaa tggaacaatg taatatgata tttcttaact tcatttccca
      121 tccattgcag aaatcataac aataaagttt tctacataag caacttcatg agctgaaaga
      181 agagaatgta taattccttt ccttggacta agccaaaaga aatgaagttg attcttctct
      241 gttagcctcc tgtgtaaaat ttttctcctt atcatctcat ctagtcatat ctttctgcag
      301 tttgaattac cctcttttcc tcaatctggt aaggcagtga aaggatgttt gttctgctaa
      361 ttaactttat taccctgata actccctgca gcctttgacg aaaacaatta ccgttcc
//
LOCUS       KCPA01003974             566 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 438099tic ultra-conserved element locus
            uce-3912, sequence.
ACCESSION   KCPA01003974
VERSION     KCPA01003974.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 566)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 566)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..566
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="438099tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>566
                     /note="ultra-conserved element locus uce-3912"
BASE COUNT          177 a           72 c          112 g          205 t
ORIGIN      
        1 gagagagtgt caaatattct ggattttgtt gctttgagtc ataatttact gttgctaagt
       61 gtttggcctg tgagtaatag tttttacgtc atgatggtat agttagaaga atcagagcat
      121 attcaaccat cctttttact tacttttaat caacttgttc ttccaaacaa ggtatggaat
      181 tgatagctgt tattgattgc ttgtagcatt acctaatctt cactaaatgt aggaagcttt
      241 tcagatttag aaaggtggca gaaaatgtct agtaatgatg ctgctgggaa ttgaagctca
      301 ataccatggt cagtataaaa gtgatatagc tataagaggt attttattat agacttttta
      361 ttaaatgctc aagctggtgt aatttacaga gattttggag ttgcttatgt ttatttcatt
      421 tgtttgaatt tccaccaagt tttattgatg ataacgtgct gaaactacag aatgtaagga
      481 atacagtgct gtgataatgg atgtcattta tgctttcaat accaaaggga aatataagca
      541 atcattgcta aaacagatat aaacgt
//
LOCUS       KCPA01003975             767 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 438206tic ultra-conserved element locus
            uce-445, sequence.
ACCESSION   KCPA01003975
VERSION     KCPA01003975.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 767)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 767)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..767
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="438206tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>767
                     /note="ultra-conserved element locus uce-445"
BASE COUNT          253 a          143 c          120 g          251 t
ORIGIN      
        1 ctcacacctc aggattaaag tgccaaggca actaacccat caatattttg gttactaacc
       61 tttaccctaa ctacatgttt gccagcatct ttctcataaa atttctgtaa gaatcacaaa
      121 aatgctgaaa aaattatttt tacagtgtag tggaactgct aagcttgtgc ctcgtttttg
      181 attaatttca tgcctgactc agtcagagat taggccctga cacaggttat aattaaatat
      241 tgaaatcatg aagtgcaaga atgtttaatt tttaaaatat gagttttaat ttacctcata
      301 cagagaatag ctctggtcac ctgcagagat gcattacaca ctacattgcc taatgtagga
      361 tgcctgaata aggctgagca tacagttaaa gtaaactaat gcaatttact gaacagcagt
      421 caaatattta tccagttgat gaagcagact ttatgtgaaa ctcagacaat aattaaagag
      481 aagccttgct taaaacatgc ttattccagt ttccacaaat atgttatacc aaagcagcat
      541 cttccttttc tcaaatattg atgttctcct aacacattat acagtgagct tgtccttggc
      601 attctcttga ctatttaatg aatacatttc ctggcatttg ccttatcttt gttatgttgt
      661 tctttggaga gctaaaacta ttagttagcc cttgacagaa aaacatcaga gcaagctagt
      721 aaaaggtctt accatatcaa agttattaac atggtatttg attaaac
//
LOCUS       KCPA01003976             402 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 438309tic ultra-conserved element locus
            uce-1122, sequence.
ACCESSION   KCPA01003976
VERSION     KCPA01003976.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 402)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 402)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="438309tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>402
                     /note="ultra-conserved element locus uce-1122"
BASE COUNT          134 a           74 c           54 g          140 t
ORIGIN      
        1 tgtgggctcc acctgcttta ttgtcagaag gaagactaag aagtctccca catatagtgt
       61 catcagcatt gtgatctggg aaacaacacc tacagaatct attattcatt aagtgtaacc
      121 aatatataat ttaaaacagt gggttttgtc aaataatgtt aggtcagcat aattttctgc
      181 ctattactaa tatctataac atctttgcct tagtcagctc tatttaaata tgcaatcatt
      241 tacagctttt gactatatgt gtgcgcactc ccaatttcca atattcaact actacaaatt
      301 ttatgctgac atcaatagca aactattaaa gacagtattt cattattggt ttttcatccc
      361 aaaagttatt tacaattata tactaagcac taatattaaa gg
//
LOCUS       KCPA01003977             518 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 438420tic ultra-conserved element locus
            uce-3279, sequence.
ACCESSION   KCPA01003977
VERSION     KCPA01003977.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 518)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 518)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="438420tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>518
                     /note="ultra-conserved element locus uce-3279"
BASE COUNT          112 a          172 c          132 g          102 t
ORIGIN      
        1 ttagaacagt gggctccaaa acccatttag gaaaggaggc ggcctgaaga ggagggggat
       61 gaagagacaa ttaattggtg aatcctttcc aaatctgtta tccccagcgg gcttggtgcc
      121 ccctgccaga cccccaggat ggcacatggg gccggggtgc cacctgtgca gagcccagag
      181 tagctgactg gcggctcttt gctccatcgg cgtctctgcc ctttattcac agataactct
      241 ctccctgttt ctaggagaaa aaaaaagtgc gttcgctaca tacaaggtga aggcagctgc
      301 gtcagcccac cctcttcaga tggaagctta ctagactctc ctccgtcctc ccccgccatg
      361 ctcgcctccc cctccagaga ctcgaaacca cagactgaac aaacgcaacc cctctcgctc
      421 tcattgaagc ccgacccgct ggcgcacctg gtgatgatgc cgccgccatc ctcgctcgtg
      481 ctcgctgaga gcgccgcgag caagcccggc gccctgcc
//
LOCUS       KCPA01003978             630 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 438526tic ultra-conserved element locus
            uce-7353, sequence.
ACCESSION   KCPA01003978
VERSION     KCPA01003978.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 630)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 630)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..630
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="438526tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>630
                     /note="ultra-conserved element locus uce-7353"
BASE COUNT          221 a          111 c          109 g          189 t
ORIGIN      
        1 ggcaaatttg ctgtatttaa tgtattggac accatctgta ttttattcaa atagggttat
       61 atattttgtg aaaataaaaa ccagcctcat gagtcagtgt gtgcaaggca gtcacttgaa
      121 tatatataat gggaaacatg ttttaggctg gaagttgcaa agggaaatca aatgtttgaa
      181 gtgtcaaagt tggaaaaata taaaatacgc ctgacaccgt agctattgaa gccaaaatga
      241 ataaatcata atctcaggaa agaaaacccc accaagttct tggctataac cttcattttc
      301 ctacactcaa ataaaattac atacaacctg ataatttaac cagacttgtc aataagaact
      361 gatggcttca gcagacacta tcacttcatg cttcagtgta gccttcagaa gcatccagta
      421 atttatccaa gaaataaatt taatgtcaaa cttgtctctt caagttgata gatgcagtgg
      481 agctgatgcg aaatatgcca tattgcagaa cactcgagta aaattaaatt aatgccagct
      541 cagtagttta ttccccacat acagcttttc ctatttaaga agtattttag tatctttcta
      601 tgtagtgcaa gcatgacttc caaggaggaa
//
LOCUS       KCPA01003979             736 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 438636tic ultra-conserved element locus
            uce-239, sequence.
ACCESSION   KCPA01003979
VERSION     KCPA01003979.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 736)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 736)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..736
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="438636tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>736
                     /note="ultra-conserved element locus uce-239"
BASE COUNT          215 a          155 c          132 g          234 t
ORIGIN      
        1 agatagcgag tggttgagat ttgctatctt tcaatatacc tcttaagtgg taataggata
       61 accccttaac acgttggtag cctatcaagc tgcccctcag acttgaccct ggggtgaaac
      121 gggaaagtca gctctgttca cagcaattca acttctgtgc tagccaataa tgaagtgacc
      181 tgaaataata taaaaccctt tcaggctgtt tgatgatttt tgtctgggat aagagtagag
      241 atcctgattc ctagtcacag ttcatttcat ttttcacttc tgatgagatc tcagctgtta
      301 tctgataaaa ttgaacaact attactaggc tctgctgagt aaagcccctt gactgctctt
      361 aacagaaatc ctatacactc cactttgtca gcagttttga attcatcgtc gcaacaagat
      421 gataggaata atcttaccaa ctgagattga cagttcattt cagaaatcaa tatttacaat
      481 ttacttcttt caaagttcat tcgagagaag attccatatt atccctctcc aaataagctg
      541 atcatatctc agtcgtccct ggaatgagtt ttcccaaaat gtgaattttt ggtaaaaatc
      601 aatgtcagca ttgtgcactt taatctcgcc tatgatgaca gtaaatcttt atctttttat
      661 gggtaaacgc cactggctgc tgacaccatt tcctcgcaga acaaagcctg gtccatgtgg
      721 actatggtag atacat
//
LOCUS       KCPA01003980             528 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 438847tic ultra-conserved element locus
            uce-3778, sequence.
ACCESSION   KCPA01003980
VERSION     KCPA01003980.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 528)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 528)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="438847tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>528
                     /note="ultra-conserved element locus uce-3778"
BASE COUNT          112 a          128 c          124 g          164 t
ORIGIN      
        1 gcatcccagc aggagcccct gcccttggct ctgctgctgc tgcctctctg catattgcga
       61 gctcattctg atgtgcgcta atgctattat cctccagaaa ttgaaatcaa gtctgaacct
      121 ataatgtttc actgggaggg aattggggtt atatattcct gtgtacagca gcattctatt
      181 tcagtcatag catttaatta tgattggtgt gttagtgccc accagagcat aacaaattgt
      241 cattatgtta ttctgctgag tctaatttaa ttggcaagtt gtcacaaaag caattatcca
      301 tcatttattt tgttgccata accacatctt ggagagcacc tgctgtctga agtggaaagg
      361 ctctgcagtc tcttggtcct ggatttcttc cacttgcctg acacaaagac accatttcct
      421 cctcttatat gttccttttt cccagcgtgg gctcctgtgc agggctgggg atgccggggg
      481 cagtgctctg tgcgccctgt tggggagacc ttggggccag cccagggc
//
LOCUS       KCPA01003981             598 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 438952tic ultra-conserved element locus
            uce-1243, sequence.
ACCESSION   KCPA01003981
VERSION     KCPA01003981.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 598)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 598)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..598
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="438952tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>598
                     /note="ultra-conserved element locus uce-1243"
BASE COUNT          181 a          114 c           90 g          213 t
ORIGIN      
        1 cagagcaatt attattgctc attacatttc catgcagaaa tcattacatt ttatatcaca
       61 atgtgcattt ttttataagt aagctttaaa caaattagaa tacttaatat gctttttgaa
      121 cttttgccag acgtgtgctc ccaagccggc tccttctatt tacattgtag catttatcca
      181 tttccaaata tgagaagatt tatctatcag attctgtgca aattcagtac acagataatt
      241 tgtaaaaagc tttctttttc aaaatgttct gtggtttttc taatctcatc tcttttctaa
      301 tttcctaatc atataacctt gaagtctaaa gacacagcct gtgataatct gtgtaaactg
      361 tctttattgt tatcacagac atttattaca cacgcatacg cattcaaagc tgccttttaa
      421 gtaatacttt agtcaaagtt caatcagatc cacattactg ctactcatca gatagaaagt
      481 gtttgcaagc aggaggggga tattgacttt aaaaattcac tggcgaggcg tacagagcct
      541 gcaggaatgt caaaactcca acctgcattt tgatgttttt gcctcaggtt agtcttga
//
LOCUS       KCPA01003982             454 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 439059tic ultra-conserved element locus
            uce-1403, sequence.
ACCESSION   KCPA01003982
VERSION     KCPA01003982.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 454)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 454)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="439059tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>454
                     /note="ultra-conserved element locus uce-1403"
BASE COUNT          114 a          110 c           98 g          132 t
ORIGIN      
        1 tttcccttcc tttgggtggc agcgcaaagc tctgtccccc ttcctggcat cctggacgct
       61 cccgtgggct cacccacaga gtgtccagga gtcacccatc aacaacaaac agttaaatat
      121 caatgcactt tggcaacaat aaaccctgct tttaatttat gctaatatgt agggttgtgg
      181 tgacagtaag aacaaaatta cagagtggct ttctagctgg taattatccc tccattttcg
      241 ttgctcggga agatggacac acaattatgc tctcttgctg tatattaata cggattcttg
      301 acatcttcag cagacctgga gctgtcatcg ggctttttgt ctactttaat tgaaaattaa
      361 tggttactgt gttaccacgg aaaccgtggc aatggacgcc aatagcgctc acatatcaaa
      421 caggcactgg tggcattgtc tgtccgtggt gacc
//
LOCUS       KCPA01003983             419 bp    DNA     linear   VRT 06-MAR-2019
DEFINITION  TLS: Tichodroma muraria 439170tic ultra-conserved element locus
            uce-1021, sequence.
ACCESSION   KCPA01003983
VERSION     KCPA01003983.1
DBLINK      BioProject: PRJNA480834
            BioSample: SAMN10450379
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Tichodroma muraria
  ORGANISM  Tichodroma muraria
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Sittidae; Tichodroma.
REFERENCE   1  (bases 1 to 419)
  AUTHORS   Oliveros,C.H., Field,D.J., Ksepka,D.T., Barker,F.K., Aleixo,A.,
            Andersen,M.J., Alstrom,P., Benz,B.W., Braun,E.L., Braun,M.J.,
            Bravo,G.A., Brumfield,R.T., Chesser,R.T., Claramunt,S.,
            Cracraft,J., Cuervo,A.M., Derryberry,E.P., Glenn,T.C., Harvey,M.G.,
            Hosner,P.A., Joseph,L., Kimball,R., Mack,A.L., Miskelly,C.M.,
            Peterson,A.T., Robbins,M.B., Sheldon,F.H., Silveira,L.F.,
            Smith,B.T., White,N.D., Moyle,R.G. and Faircloth,B.C.
  TITLE     Earth history and the passerine superradiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 419)
  AUTHORS   Oliveros,C.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2018) Department of Biological Sciences,
            Louisiana State University, 287 Life Sciences Building, Baton
            Rouge, LA 70803, United States of America
COMMENT     We identified thousands of ultra-conserved elements (UCEs) in 221
            passerine and non-passerine species to examine passerine
            diversification dynamics and biogeographic history. All of the UCEs
            from one bird are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity ver. r2013.08.14
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Tichodroma muraria"
                     /mol_type="genomic DNA"
                     /submitter_seqid="439170tic"
                     /db_xref="taxon:237442"
                     /tissue_type="muscle/liver"
                     /geo_loc_name="Russia"
     misc_feature    <1..>419
                     /note="ultra-conserved element locus uce-1021"
BASE COUNT          129 a           85 c           90 g          115 t
ORIGIN      
        1 aattcccaag tcagagcagg agaggaaatt aatggcagcg ttcaagaaga atgatggagg
       61 gaaatataga aagcagtcaa tagcccattc tgcgctgtac ggacctgaca ggaatttcac
      121 agtctcttgg tttttcagcc cactcatgtg cattcatcag aaaccagtca catctggctg
      181 ccaggatggg gggttaattt tctctaaatg cctcagcagt tttgttctag ctgaggcaaa
      241 ctctgtgact gcaaagctga tgagtaaaat atttctactt cacccagttt aactcaaaac
      301 cgatagcctc gggacatatt gaacctttct taaaataatc ttttgaagct ttttgaatgg
      361 cacatcaggt caggccaaag tttaaaatac aagtttaaga ctttgatgga cacaaggct
//
